Assessing size at sexual maturity and fine-scale population structure in a direct developing whelk (Buccinum undatum) in Southern Newfoundland, Canada
Authors/Creators
- 1. Department of Biology, University of Toronto Mississauga
- 2. Department of Ecology and Evolutionary Biology, University of Toronto
- 3. Fisheries and Oceans Canada, Northwest Atlantic Fisheries Centre
-
4.
University of New Brunswick, Saint John Campus, Department of Biological Sciences
Description
R script file used to filter genotype data, estimate L50, and analyze patterns of population structure of Buccinum undatum in Southern Newfoundland, Canada. Also included are the following files required to run the script:
populationsNWA.snps.vcf - Northwest Atlantic group output at the conclusion of the Stacks de novo pipeline
pop_map_NWA.txt - Population map for the Northwest Atlantic group
genlightNWAFullFilt.rds - Filtered genotype data for the Northwest Atlantic group
populations3Ps.snps.vcf - 3Ps group output at the conclusion of the Stacks de novo pipeline
pop_map_3Ps.txt - Population map for the 3Ps group
genlight3PsFullFilt.rds - Filtered genotype data for the 3Ps group
maturity_data.csv - Data set containing, shell length, sex, and maturity status for samples.
sample_site_coordinates_3Ps.csv - Data set containing coordinates of 3Ps sample sites
Files
maturity_data.csv
Files
(435.8 MB)
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