Published 2024 | Version v3

AgroLD RDF 2024 update

Authors/Creators

  • 1. IRD (Institute of Research for Developpment)

Description

The demand for food is expected to grow substantially in the coming years. To address this challenge, especially in the context of climate change, a deeper understanding of genotype-phenotype relationships is crucial for improving crop yields. Recent advances in high-throughput technologies have transformed the landscape of plant sciences research. However, there is an urgent need to integrate and consolidate complementary data to understand the biological system. We introduce AgroLD, a knowledge graph utilizing Semantic Web technologies to integrate plant science data seamlessly. AgroLD is designed to facilitate hypothesis formulation and validation within the scientific community. With approximately 1.08 billion triples, it integrates and annotates data from more than 151 datasets across 19 distinct sources. The overarching goal is to provide a specialized knowledge platform addressing complex biological questions in plant sciences, including gene participation in plant disease resistance and adaptive responses to climate change.

Notes

Please cite : Venkatesan A, Tagny Ngompe G, Hassouni NE, Chentli I, Guignon V, et al. (2018) Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy. PLOS ONE 13(11): e0198270. https://doi.org/10.1371/journal.pone.0198270

Files

greenphyldb.ttl.zip

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Additional details

Related works

Is supplement to
Dataset: 10.1371/journal.pone.0198270 (DOI)

Dates

Submitted
2024

Software

Repository URL
http://www.agrold.org

References

  • Venkatesan A, Tagny Ngompe G, Hassouni NE, Chentli I, Guignon V, et al. (2018) Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy. PLOS ONE 13(11): e0198270. https://doi.org/10.1371/journal.pone.0198270