Published May 23, 2023
| Version v1
Dataset
Open
TABLE 1 in Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China
Authors/Creators
- 1. Department of Botany and Microbiology, College of Science, King Saud University, P. O. Box 2455, Riyadh 11451, Saudi Arabia. & bhatdj @ gmail. com; https: // orcid. org / 0000 - 0002 - 3800 - 5910
- 2. Department of Botany and Microbiology, College of Science, King Saud University, P. O. Box 2455, Riyadh 11451, Saudi Arabia. & tdawoud @ ksu. edu. sa; https: // orcid. org / 0000 - 0002 - 1444 - 4185
- 3. Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, P. R. China. & saowaluckfai @ gmail. com; https: // orcid. org / 0000 - 0002 - 4706 - 6547
- 4. Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, P. R. China. & 540827687 @ qq. com; https: // orcid. org / 0000 - 0002 - 6744 - 6707
Description
TABLE 1. Names, strain numbers, and corresponding GenBank accession numbers of the taxa used in this study. Cultures from holotype and epitype specimens are labeled as T and ET respectively. Species highlighted in bold were derived from this study. “/” means sequences data are unavailable in the GenBank database.
| GenBank accession numbers | ||||||
|---|---|---|---|---|---|---|
| Species name | Strain numbers | Types | ||||
| ITS | LSU | RPB2 | β-tubulin | |||
| Annulohypoxylon annulatum | CBS 140775 | ET | KY610418 | KY610418 | KY624263 | KX376353 |
| Annulohypoxylon michelianum | CBS 119993 | KX376320 | KY610423 | KY624234 | KX271239 | |
| Annulohypoxylon truncatum | CBS 140778 | ET | KY610419 | KY610419 | KY624277 | KX376352 |
| Daldinia bambusicola | CBS 122872 | T | KY610385 | KY610431 | KY624241 | AY951688 |
| Daldinia childiae | CBS 122881 | T | KU683757 | MH874773 | KU684290 | KU684129 |
| Daldinia concentrica | CBS 113277 | AY616683 | KY610434 | KY624243 | KC977274 | |
| Daldinia dennisii | CBS 114741 | T | JX658477 | KY610435 | KY624244 | KC977262 |
| Daldinia eschscholtzii | MUCL 45435 | JX658484 | KY610437 | KY624246 | KC977266 | |
| Daldinia petriniae | MUCL 49214 | ET | AM749937 | KY610439 | KY624248 | KC977261 |
| Daldinia placentiformis | MUCL 47603 | AM749921 | KY610440 | KY624249 | KC977278 | |
| Daldinia vernicosa | CBS 119316 | ET | KY610395 | KY610442 | KY624252 | KC977260 |
| Durotheca rogersii | YMJ 92031201 | EF026127 | / | JX507794 | EF025612 | |
| Durotheca comedens | YMJ 90071615 | T | EF026128 | / | JX507793 | EF025613 |
| Species name | Strain numbers | Types | ||||
| ITS | LSU | RPB2 | β-tubulin | |||
| Durotheca crateriformis | GMBC0205 | T | MH645426 | MH645425 | MH645427 | MH049441 |
| Durotheca guizhouensis | GMBC0065 | T | MH645423 | MH645421 | MH645422 | MH049439 |
| Durotheca rogersii | GMBC0204 | MH645433 | MH645434 | MH645435 | MH049449 | |
| Graphostroma platystomum | CBS 270.87 | T | JX658535 | DQ836906 | KY624296 | HG934108 |
| Hypomontagnella barbarensis | STMA 14081 | T | MK131720 | MK131718 | MK135891 | MK135893 |
| Hypomontagnella monticulosa | MUCL 54604 | KY610404 | KY610487 | KY624305 | KX271273 | |
| Hypomontagnella submonticulosa | CBS 115280 | KC968923 | KY610457 | KY624226 | KC977267 | |
| Hypoxylon addis | MUCL 52797 | T | KC968931 | ON954141 | OP251037 | KC977287 |
| Hypoxylon aveirense | MUM 19.40 | T | MN053021 | ON954142 | OP251028 | MN066636 |
| Hypoxylon baruense | UCH9545 | T | MN056428 | ON954143 | / | MK908142 |
| Hypoxylon canariense | MUCL 47224 | ON792787 | ON954140 | OP251029 | ON813073 | |
| Hypoxylon carneum | MUCL 54177 | KY610400 | KY610480 | KY624297 | KX271270 | |
| Hypoxylon cercidicola | CBS 119009 | KC968908 | KY610444 | KY624254 | KC977263 | |
| Hypoxylon chionostomum | STMA 14060 | KU604563 | ON954144 | OP251030 | ON813072 | |
| Hypoxylon chrysalidosporum | FCATAS2710 | T | OL467294 | OL615106 | OL584222 | OL584229 |
| Hypoxylon crocopeplum | CBS 119004 | KC968907 | KY610445 | KY624255 | KC977268 | |
| Hypoxylon cyclobalanopsidis | FCATAS2714 | T | OL467298 | OL615108 | OL584225 | OL584232 |
| Hypoxylon erythrostroma | MUCL 53759 | KC968910 | ON954154 | OP251031 | KC977296 | |
| Hypoxylon eurasiaticum | MUCL 57720 | T | MW367851 | / | MW373852 | MW373861 |
| Hypoxylon fendleri | MUCL 54792 | KF234421 | KY610481 | KY624298 | KF300547 | |
| Hypoxylon ferrugineum | CBS 141259 | KX090079 | / | / | KX090080 | |
| Hypoxylon fragiforme | MUCL 51264 | ET | KC477229 | KM186295 | MK887342 | KX271282 |
| Hypoxylon fuscoides | MUCL 52670 | T | ON792789 | ON954145 | OP251038 | ON813076 |
| Hypoxylon fuscum | CBS 113049 | ET | KY610401 | KY610482 | KY624299 | KX271271 |
| Hypoxylon gibriacense | MUCL 52698 | T | KC968930 | ON954146 | OP251026 | ON813074 |
| Hypoxylon griseobrunneum | CBS 331.73 | T | KY610402 | KY610483 | KY624300 | KC977303 |
| Hypoxylon guilanense | MUCL 57726 | T | MT214997 | MT214992 | MT212235 | MT212239 |
| Hypoxylon haematostroma | MUCL 53301 | ET | KC968911 | KY610484 | KY624301 | KC977291 |
| Hypoxylon hainanense | FCATAS2712 | T | OL467296 | OL616132 | OL584224 | OL584231 |
| Hypoxylon hinnuleum | ATCC 36255,MUCL 3621 | T | MK287537 | MK287549 | MK287562 | MK287575 |
| Hypoxylon hongheensis | KUMCC 21-0452 | OM001333 | OM001334 | ON392008 | ON468655 | |
| Hypoxylon hongheensis | HKAS 122663 | T | OM001336 | OM001339 | ON392009 | ON468656 |
| Hypoxylon howeanum | MUCL 47599 | AM749928 | KY610448 | KY624258 | KC977277 | |
| Hypoxylon hypomiltum | MUCL 51845 | KY610403 | KY610449 | KY624302 | KX271249 | |
| Species name | Strain numbers | Types | ||||
| ITS | LSU | RPB2 | β-tubulin | |||
| Hypoxylon invadens | MUCL 51475 | T | MT809133 | MT809132 | MT813037 | MT813038 |
| Hypoxylon investiens | CBS 118183 | KC968925 | KY610450 | KY624259 | KC977270 | |
| Hypoxylon isabellinum | MUCL 53308 | T | KC968935 | / | OP251032 | KC977295 |
| Hypoxylon laschii | MUCL 52796 | JX658525 | / | OP251027 | ON813075 | |
| Hypoxylon lateripigmentum | MUCL 53304 | T | KC968933 | KY610486 | KY624304 | KC977290 |
| Hypoxylon lechatii | MUCL 54609 | KF923407 | / | OP251033 | KF923405 | |
| Hypoxylon lenormandii | CBS 119003 | KC968943 | KY610452 | KY624261 | KC977273 | |
| Hypoxylon lienhwacheense | MFLUCC14-1231 | KU604558 | MK287550 | MK287563 | KU159522 | |
| Hypoxylon lividipigmentum | STMA14045 | ON792788 | / | / | ON813077 | |
| Hypoxylon lividipigmentum | BCRC 34077 | JN979433 | / | / | AY951735 | |
| Hypoxylon macrocarpum | CBS 119012 | ON792785 | / | OP251034 | ON813071 | |
| Hypoxylon munkii | MUCL 53315 | KC968912 | / | OP251035 | KC977294 | |
| Hypoxylon musceum | MUCL 53765 | KC968926 | KY610488 | KY624306 | KC977280 | |
| Hypoxylon ochraceum | MUCL 54625 | ET | KC968937 | / | KY624271 | KC977300 |
| Hypoxylon olivaceopigmentum | DSM 107924 | T | MK287530 | MK287542 | MK287555 | MK287568 |
| Hypoxylon perforatum | CBS115281 | KY610391 | KY610455 | KY624224 | KX271250 | |
| Hypoxylon petriniae | CBS 114746 | T | KY610405 | KY610491 | KY624279 | KX271274 |
| Hypoxylon pilgerianum | STMA 13455 | KY610412 | KY610412 | KY624308 | KY624315 | |
| Hypoxylon porphyreum | CBS 119022 | KC968921 | KY610456 | KY624225 | KC977264 | |
| Hypoxylon pseudofuscum | DSM112038 | T | MW367857 | MW367848 | MW373858 | MW373867 |
| Hypoxylon pulicicidum | CBS 122622 | T | JX183075 | KY610492 | KY624280 | JX183072 |
| Hypoxylon rickii | MUCL 53309 | ET | KC968932 | KY610416 | KY624281 | KC977288 |
| Hypoxylon rubiginosum | MUCL 52887 | ET | KC477232 | KY610469 | KY624266 | KY624311 |
| Hypoxylon samuelsii | MUCL 51843 | ET | KC968916 | KY610466 | KY624269 | KC977286 |
| Hypoxylon sporistriatatunicum | UCH9542 | T | MN056426 | / | OP251036 | MK908140 |
| Hypoxylon subticinense | MUCL 53752 | KC968913 | / | / | KC977297 | |
| Hypoxylon texense | DSM 107933 | T | MK287536 | MK287548 | MK287561 | MK287574 |
| Hypoxylon ticinense | CBS 115271 | JQ009317 | KY610471 | KY624272 | AY951757 | |
| Hypoxylon trugodes | MUCL 54794 | ET | KF234422 | KY610493 | KY624282 | KF300548 |
| Hypoxylon vogesiacum | CBS 115273 | KC968920 | KY610417 | KY624283 | KX271275 | |
| Hypoxylon wuzhishanense | FCATAS2708 | T | OL467292 | OL615104 | OL584220 | OL584227 |
| Hypoxylon zhaotongensis | GMBCC1168 | T | OP597690 | OP598100 | OP615662 | OP615660 |
| Hypoxylon zhaotongensis | GMBCC1157 | OP597691 | OP598101 | OP615663 | OP615661 | |
| Jackrogersella cohaerens | CBS 119126 | KY610396 | KY610497 | KY624270 | KY624314 | |
| Species name | Strain numbers | Types | ||||
| ITS | LSU | RPB2 | β-tubulin | |||
| Jackrogersella multiformis | CBS 119016 | ET | KC477234 | KY610473 | KY624290 | KX271262 |
| Natonodosa speciosa | CLM-RV86 | T | MF380435 | MF380435 | MH745150 | / |
| Parahypoxylon papillatum comb. nov. | ATCC 58729 | T | KC968919 | KY610454 | KY624223 | KC977258 |
| Parahypoxylon ruwenzoriense sp. nov. | MUCL51392 | T | ON792786 | / | OP251039 | ON813078 |
| Pyrenopolyporus hunteri | MUCL 52673 | ET | KY610421 | KY610472 | KY624309 | KU159530 |
| Pyrenopolyporus laminosus | MUCL 53305 | T | KC968934 | KY610485 | KY624303 | KC977292 |
| Pyrenopolyporus nicaraguense | CBS 117739 | AM749922 | KY610489 | KY624307 | KC977272 | |
| Rhopalostroma angolense | CBS 126414 | KY610420 | KY610459 | KY624228 | KX271277 | |
| Rostrohypoxylon terebratum | CBS 119137 | T | DQ631943 | DQ840069 | DQ631954 | DQ840097 |
| Ruwenzoria pseudoannulata | MUCL 51394 | T | KY610406 | KY610494 | KY624286 | KX271278 |
| Thamnomyces dendroidea | CBS 123578 | T | FN428831 | KY610467 | KY624232 | KY624313 |
| Xylaria arbuscula | CBS 126415 | KY610394 | KY610463 | KY624287 | KX271257 | |
| Xylaria hypoxylon | CBS 122620 | ET | KY610407 | KY610495 | KY624231 | KX271279 |
......continued on the next page
......continued on the next page
......continued on the next page
Abbreviations: CBS: Culture collection of the Westerdijk Fungal Biodiversity Institute, Utrecht, Netherlands; MUCL: Agrofood & Environmental Fungal Collection; GMBC: Guizhou Medical University Culture Collection; STMA: HZI culture collection, Helmholtz Centre for Infection Research, Braunschweig, Germany; MUM: Micoteca da Universidade do Minho; UCH: Universidad Autonoma de Chiriqui; FCATAS: Fungarium of the Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences; KUMCC: Kunming Institute of Botany Culture Collection; HKAS: Cryptogamic Herbarium of Kunming Institute of Botany, Chinese Academy of Sciences; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; JF: Jonkershoek Forestry Research Centre, Environment Affairs Department; BCRC: Bioresource Collection and Research Center; DSM: Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH; GMBCC: Guizhou Medical University Culture Collection, Guiyang, China; CLM -RV: -; ATCC: American Type Culture Collection; YMJ: YuMing, Ju; “-”: not available in the abbreviations.
Notes
Published as part of Zhang, Gui-Qing, Dai, Dong-Qin, Wijayawardene, Nalin N., Promputtha, Itthayakorn, Bhat, D. Jayarama, Dawoud, Turki M., Tibpromma, Saowaluck & Wei, Xiao-Mei, 2023, Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China, pp. 113-116 in Phytotaxa 598 (2) on page 113, DOI: 10.11646/phytotaxa.598.2.1, http://zenodo.org/record/7961054
Files
Files
(18.2 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:82161559b82a05589f5ce93843d08ffd
|
18.2 kB | Download |
System files
(42.9 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:a2c887ce80eee36965163d56aa360e75
|
42.9 kB | Download |
Additional details
Identifiers
Related works
- Is part of
- Journal article: 10.11646/phytotaxa.598.2.1 (DOI)
- Journal article: urn:lsid:plazi.org:pub:7836FF90BE6BFFB83E50FFA9FFAD2547 (LSID)
- Journal article: http://publication.plazi.org/id/7836FF90BE6BFFB83E50FFA9FFAD2547 (URL)
- Journal article: http://zenodo.org/record/7961054 (URL)