Published November 8, 2024 | Version v1.0

Source data for publication "Bacteria use exogenous peptidoglycan as a danger signal to trigger biofilm formation"

Description

This dataset contains the source data for the figures in the following publication: 

Title: Bacteria use exogenous peptidoglycan as a danger signal to trigger biofilm formation

Authors: Sanika Vaidya, Dibya Saha, Daniel K.H. Rode, Gabriel Torrens, Mads F. Hansen, Praveen K. Singh, Eric Jelli, Kazuki Nosho, Hannah Jeckel, Stephan Göttig, Felipe Cava, Knut Drescher

Journal: Nature Microbiology, 2025

 

Description of the dataset: 

The data is organized by figures in the publication receferenced above. For each figure, there is a XLSX-file that contains the processed data and a ZIP-archive that contains the raw image data. The ZIP-archive also contains readme documents with more detailed descriptions for every set of raw image data. 

Example: For Figure 1 in the main text of the publication, there following data are available:

  • raw data: Figure_01.zip
  • processed data: Processed_Source_Data_Figure1.xlsx

Similarly, XLSX-files and ZIP-archives are available for the main text Figures 1-6. For the Extended Data (ED) Figures 1-10, there are XLSX-files available that present the data shown in each figure. Only some of the Extended Data Figures present results based on image data - therefore raw image data ZIP-archives are only available for ED Figures 3, 6, 7, 8, 9, 10.

Files

Figure_01.zip

Files (114.5 GB)

Name Size
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Additional details

Funding

European Commission
BIOFAGE - Interaction Dynamics of Bacterial Biofilms with Bacteriophages 716734
Swiss National Science Foundation
Causes and consequences of phenotypic subpopulation formation during bacterial biofilm development TMCG-3_213801
Swiss National Science Foundation
NCCR AntiResist (phase II) 225154