DNA barcode library of Portuguese water mites, with the descriptions of two new species (Acari, Hydrachnidia)
Authors/Creators
- 1. University of Montenegro, Podgorica, Montenegro
- 2. University of Szczecin, Szczecin, Poland
- 3. Universidade do Porto, Vila do Conde, Portugal|BIOPOLIS Program in Genomics, Biodiversity and Land Planning, Vila do Conde, Portugal
- 4. Universidade do Porto, Vila do Conde, Portugal|EBM, Estação Biológica de Mértola, Mértola, Portugal|BIOPOLIS Program in Genomics, Biodiversity and Land Planning, Vila do Conde, Portugal
- 5. BIOPOLIS Program in Genomics, Biodiversity and Land Planning, Vila do Conde, Portugal|Universidade do Porto, Vila do Conde, Portugal
- 6. Universidade do Porto, Vila do Conde, Portugal|BIOPOLIS Program in Genomics, Biodiversity and Land Planning, Vila do Conde, Portugal|EBM, Estação Biológica de Mértola, Praça Luís de Camões, Mértola, Portugal
- 7. EBM, Estação Biológica de Mértola, Praça Luís de Camões, Mértola, Portugal|Universidade do Porto, Vila do Conde, Portugal|BIOPOLIS Program in Genomics, Biodiversity and Land Planning, Vila do Conde, Portugal
- 8. Universidade do Porto, Vila do Conde, Portugal|University of Florence, Sesto Fiorentino, Italy|BIOPOLIS Program in Genomics, Biodiversity and Land Planning, Vila do Conde, Portugal
- 9. University of Florence, Sesto Fiorentino, Italy
- 10. Norwegian University of Science and Technology, Trondheim, Norway
Description
This study presents the first results from the analysis of water mites collected in Portugal as part of the Biodiversity Genomics Europe project. 307 COI DNA barcodes clustered into 75 BINs are provided, with 38 BINs being unique and deposited for the first time in the Barcode of Life Data Systems (BOLD). 65 species have been identified, of which 36 are new to the water mite fauna of Portugal. Two species, Torrenticola soniae Pešić, sp. nov. and T. elisabethae Pešić, sp. nov. (Torrenticolidae), are described as new to science. 47% of the water mite species currently known from Portugal now have reference barcodes in BOLD. High intraspecific distances were recorded for some species, suggesting the presence of cryptic diversity and species complexes that needs further study. Our results improve the DNA barcode reference database for Portuguese water mites, enhancing species identification accuracy and stimulating future investigation.
Files
ZK_article_131730.pdf
Files
(11.3 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:416f7ea7c9e84f6607d2e2508e0cc67e
|
11.3 MB | Preview Download |
System files
(725.9 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:17d953935e114e1b6a4c8ee86d2a1866
|
725.9 kB | Download |
Linked records
Additional details
References
- Asadi M, Pešić V, Etemadi I (2010) A revised survey of water mites (Acari: Hydrachnidia) from Iran: new synonyms and descriptions of three new species. Zootaxa 2628: 43–55. https://doi.org/10.11646/zootaxa.2628.1.3
- Biesiadka E, Kowalik W (1979) A new species of Mideopsis Neuman (Hydrachnellae, Acari) from Poland. Bulletin of the Polish Academy of Sciences. Biological Sciences, Cl. II 26: 695–702.
- Blattner L, Gerecke R, von Fumetti S (2019) Hidden biodiversity revealed by integrated morphology and genetic species delimitation of spring dwelling water mite species (Acari, Parasitengona: Hydrachnidia). Parasites Vectors 12: 492. https://doi.org/10.1186/s13071-019-3750-y
- Cantallo H, Gomes N, Antunes C, Ribeiro T, Gomes MI, Costa DA (2021) Catalogue of aquatic mites from the Minho River (NW Iberian Peninsula). Environmental Smoke (Special Issue): 44–47. https://doi.org/10.32435/envsmoke/xibesymp.7
- Cantallo H, Gomes N, Antunes C, Martins D, Costa DA (2022) Checklist of water mites from mainland Portugal and its archipelagos. Zootaxa 5213: 336–370. https://doi.org/10.11646/zootaxa.5213.4.2
- Davids C, Di Sabatino A, Gerecke R, Gledhill T, Smit H, Van der Hammen H (2007) Acari: Hydrachnidia. In: Gerecke R (Ed.) Chelicerata: Acari I. Süßwasserfauna von Mitteleuropa (Vol. 7, 2–1). Elsevier Spektrum Akademischer Verlag, München, 241–376. https://doi.org/10.1007/978-3-662-55958-1_7
- Di Sabatino A, Gerecke R, Gledhill T, Smit H (2010) Acari: Hydrachnidia II. In: Gerecke R (Ed.) Chelicerata: Acari II. Süßwasserfauna von Mitteleuropa, Vol. 7, 2–2, Elsevier Spektrum Akademischer Verlag, Heidelberg, 1–234. https://doi.org/10.1007/978-3-8274-2266-8_1
- Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high 679 throughput. Nucleic acids research 32(5): 1792–1797. https://doi.org/10.1093/nar/gkh340
- Felsenstein J (1985) Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783–791. https://doi.org/10.2307/2408678
- Ferreira S, Paupério J, Grosso-Silva JM, Beja P (2019) DNA barcoding of Sialis sp. (Megaloptera) in Portugal: the missing tool to species identification. Aquatic Insects 40: 173–184. https://doi.org/10.1080/01650424.2019.1571612
- Ferreira SA, Andrade R, Gonçalves AR, Sousa P, Paupério J, Fonseca NA, Beja P (2020a) The InBIO Barcoding Initiative Database: DNA barcodes of Portuguese Diptera 01. Biodiversity Data Journal 8: e49985. https://doi.org/10.3897/BDJ.8.e49985
- Ferreira S, Tierno de Figueroa JM, Martins FMS, Veríssimo J, Quaglietta L, Grosso-Silva JM, Lopes PB, Sousa P, Paupério J, Fonseca NA, Beja P (2020b) The InBIO Barcoding Initiative Database: contribution to the knowledge on DNA barcodes of Iberian Plecoptera. Biodiversity Data Journal 8: e55137. https://doi.org/10.3897/BDJ.8.e55137
- Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology 3: 294–299.
- Gerecke R (1991) Taxonomische, faunistische und ökologische Untersuchungen an Wassermilben (Acari, Actinedida) aus Sizilien unter Berücksichtigung anderer aquatischer Invertebraten. Lauterbornia 7: 1–304.
- Gerecke R (2009) Revisional studies on the European species of the water mite genus Lebertia Neuman, 1880 (Acari: Hydrachnidia: Lebertiidae). Abhandlungen der Senckenbergischen Naturforschenden Gesellschaft 566: 1–144.
- Gerecke R, Gledhill T, Pešić V, Smit H (2016) Chelicerata: Acari III. In: Gerecke R (Ed.) Süßwasserfauna von Mitteleuropa, Bd. 7/2-3. Springer-Verlag Berlin, Heidelberg, 1–429. https://doi.org/10.1007/978-3-8274-2689-5
- Gerecke R, Kjærstad G, Ekrem T, Stur E (2022) A faunistic study of water mites (Hydrachnidia and Halacaridae) from southern Norway. Norwegian Journal of Entomology 69: 243–268.
- Hebert PDN, Penton EH, Burns JM, Janzen DH, Hallwachs W (2004) Ten species in one: DNA barcoding reveals cryptic species in the Neotropical butterfly Astraptes fulgerator. Proceedings of the National Academy of Sciences of the United States of America 101: 14812–1817. https://doi.org/10.1073/pnas.0406166101
- Hebert PDN, Ratnasingham S, Zakharov EV, Telfer AC, Levesque-Beaudin V, Milton MA, Pedersen S, Jannetta P, deWaard JR (2016) Counting animal species with DNA barcodes: Canadian insects. Philosophical Transactions of the Royal Society B: 37120150333. https://doi.org/10.1098/rstb.2015.0333
- Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16: 111–120. https://doi.org/10.1007/BF01731581
- Kumar S, Stecher G, Li M, Knyaz C, Tamura K (2018) MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Molecular Biology and Evolution 35: 547–1549. https://doi.org/10.1093/molbev/msy096
- López-Peña D, Gerecke R, García-Roger EM, Martin P, Jiménez-Peydró R (2022) Parasite-host relationships of water mites (Acari: Hydrachnidia) and black flies (Diptera: Simuliidae) in southeastern Spain. Parasites & Vectors 15(1): 474. https://doi.org/10.1186/s13071-022-05610-2
- Lundblad O (1942) Afrikanische Hydracarinen. Entomologisk Tidskrift 63: 155–209.
- Lundblad O (1954) Neue südeuropäische Wassermilben. Zoologischer Anzeiger 153: 154–159.
- Lundblad O (1956) Zur Kenntnis süd- und mitteleuropäischer Hydrachnellen. Arkiv för Zoologi 10: 1–306.
- Lundblad O (1962) Wassermilben von den Kanarischen Inseln. Arkiv för Zoologi, Ser. 2, 15(16): 285–300.
- Pauperio J, Gonzalez LM, Martinez J, González MA, Martins FM, Veríssimo J, Puppo P, Pinto J, Chaves C, Pinho CJ, Grosso-Silva JM, Quaglietta L, Silva TL, Sousa P, Alves PC, Fonseca N, Beja P, Ferreira S (2023) The InBIO barcoding initiative database: DNA barcodes of Iberian Trichoptera, documenting biodiversity for freshwater biomonitoring in a Mediterranean hotspot. Biodiversity Data Journal 11: e97484. https://doi.org/10.3897/BDJ.11.e97484
- Pešić V, Goldschmidt T (2023) New DNA-assisted records of water mites from Sardinia, with the description of a new species (Acari, Hydrachnidia). Ecologica Montenegrina 69: 24–44. https://doi.org/10.37828/em.2023.69.4
- Pešić V, Smit H (2022) Water mites of Corsica: DNA barcode and morphological evidences. International Journal of Acarology 48: 418–428. https://doi.org/10.1080/01647954.2022.2086619
- Pešić V, Gerecke R, Cîmpean M (2007) Water mites of the genus Neumania Lebert (Acari, Hydrachnidia: Unionicolidae: Pionatacinae) in the Mediterranean area. Annales de Limnologie-International Journal of Limnology 43(3): 187–198. https://doi.org/10.1051/limn:2007013
- Pešić V, Valdecasas AG, García-Jimenez R (2012) Simultaneous evidence for a new species of Torrenticola Piersig, 1896 (Acari, Hydrachnidia) from Montenegro. Zootaxa 3515: 38–50. https://doi.org/10.11646/zootaxa.3515.1.2
- Pešić V, Asadi M, Cimpean M, Dabert M, Esen Y, Gerecke R, Martin P, Savić A, Smit H, Stur E (2017) Six species in one: Evidence of cryptic speciation in the Hygrobates fluviatilis complex (Acariformes, Hydrachnidia, Hygrobatidae). Systematic & Applied Acarology 22: 1327–1377. https://doi.org/10.11158/saa.22.9.4
- Pešić V, Jovanović M, Manović A, Zawal A, Bańkowska A, Ljubomirova L, Karaouzas I, Dabert M (2020) Molecular evidence for two new species of the Hygrobates fluviatilis complex from the Balkan Peninsula (Acariformes, Hydrachnidia, Hygrobatidae). Systematic & Applied Acarology 25(9): 1702–1719. https://doi.org/10.11158/saa.25.9.15
- Pešić V, Zawal A, Manović A, Bańkowska A, Jovanović M (2021a) A DNA barcode library for the water mites of Montenegro. Biodiversity Data Journal 9: e78311. https://doi.org/10.3897/BDJ.9.e78311
- Pešić V, Jovanović M, Manović A, Karaouzas I, Smit H (2021b) New records of water mites from the Balkans revealed by DNA barcoding (Acari, Hydrachnidia). Ecologica Montenegrina 49: 20–34. https://doi.org/10.37828/em.2021.49.2
- Pešić V, Esen Y, Gülle P, Zawal A, Saboori A, Jovanović M, Bańkowska A, Smit H (2022a) New records of water mites from Turkey and Iran revealed by DNA barcoding, with the description of a new species (Acari, Hydrachnidia). Systematic & Applied Acarology 27(7): 1393–1407. https://doi.org/10.11158/saa.27.7.7
- Pešić V, Esen Y, Gerecke R, Goldschmidt T, Mumladze L, Smit H, Zawal A (2022b) Evidence of cryptic speciation in the Hygrobates calliger complex (Acariformes, Hydrachnidia, Hygrobatidae) with the description of two new species. Ecologica Montenegrina 59: 101–122. https://doi.org/10.37828/em.2022.59.10
- Pešić V, Smit H, Konopleva ES (2023a) Molecular phylogeny and description of Hygrobates cyrnusensis sp. nov. reveals multiple colonization of Corsica by water mites of the H. fluviatilis-complex (Acariformes, Hydrachnidia, Hygrobatidae). Acarologia 63(1): 262–274. https://doi.org/10.24349/h12f-rs8x
- Pešić V, Jovanović M, Espiridiao Oliveira A, Pedro A, Freira M, Morais MM (2023b) New records of water mites (Acari, Hydrachnidia) from Portugal revealed by DNA barcoding, with the description of Atractides marizae sp.nov. ZooKeys 1151: 205–222. https://doi.org/10.3897/zookeys.1151.100766
- Pešić V, Zawal A, Saboori A, Bańkowska A, Cakmak I, Smit H (2023c) New records of water mites (Acari, Hydrachnidia) from Iran and Türkiye based on morphology and DNA barcodes with description of one new species. Ecologica Montenegrina 66: 11–29. https://doi.org/10.37828/em.2023.66.2
- Pešić V, Smit H, Zawal A (2023d) A new species of the genus Atractides Koch, 1837 from Montenegro (Acari: Hydrachnidia: Hygrobatidae), separated from A. nodipalpis (Thor, 1899), one of the most common water mite species in running waters in Europe. Systematic & Applied Acarology 28(5): 852–863. https://doi.org/10.11158/saa.28.5.7
- Pešić V, Bańkowska A, Zawal A, Rewicz T, Smit H (2023e) Molecular diversity and species delimitation in the genus Mideopsis Neuman, 1880 in Europe (Acari, Hydrachnidia, Mideopsidae). Ecologica Montenegrina 70: 101–115. https://doi.org/10.37828/em.2023.70.12
- Pešić V, Esen E, Gülle P, Zawal A, Jovanović M, Rewicz T, Smit H (2023f) An appraisal of the water mite genus Hygrobates Koch, 1837 from Türkiye, based on morphological and molecular data (Acariformes, Hydrachnidia, Hygrobatidae). Systematic & Applied Acarology 28(4): 742–754. https://doi.org/10.11158/saa.28.4.10
- Ratnasingham S, Hebert PDN (2007) BOLD: The barcode of life data system. Molecular Ecology Notes 7: 355–364. https://doi.org/10.1111/j.1471-8286.2007.01678.x
- Ratnasingham S, Hebert PDN (2013) A DNA-based registry for all animal species: The Barcode Index Number (BIN) system. PLoS ONE 8: e66213. https://doi.org/10.1371/journal.pone.0066213
- Smit H (2020) Water mites of the world, with keys to the families, subfamilies genera and subgenera (Acari: Hydrachnidia). Monografieën van de Nederlandse Entomologische Vereniging 12: 1–774
- Smit H, Gerecke R (2010) A checklist of the water mites of France (Acari: Hydrachnidia). Acarologia 50(1): 21–91. https://doi.org/10.1051/acarologia/20101952
- Thor S (1898) Nye hydrachnideformer, fundne i Norge sommeren 1898, Forelobig meddelelse. Archiv for Mathematik og Naturvidenskab 20: 1–12.
- Tyukosova V, Gerecke R, Stur E, Ekrem T (2022) Disentangling the identity of Lebertia porosa Thor, 1900 using integrative taxonomy (Acari: Hydrachnidia). European Journal of Taxonomy 836(1): 131–169. https://doi.org/10.5852/ejt.2022.836.1921
- Valdecasas AG (1988) Lista sinonímica y bibliográfica de las Hidracnelas (Acari, Hydrachnellae) de la Península Ibérica, Islas Baleares e Islas Canarias. Lista de la flora y fauna de las aguas continentales de la Peninsula Iberica. Publicacion no 5. Asociacion Española de Limnologia, Museo Nacional de Ciencias Naturales (CSIC), Madrid, 81 pp. http://www.limnetica.net/documentos/listas/Lista_5_Hidracnelas.pdf [accessed 16 May 2024]
- Viets K (1930) Zur Kenntnis der Hydracarinen-Fauna von Spanien. Archiv für Hydrobiologie 21(2): 175–240, 21(3): 359–446.
- Walter C (1925) Hydracariens de l'Algerie et de la Tunisie (Collections de M. H. Gauthier), Première liste. Bulletin de la Société d'histoire naturelle de l'Afrique du Nord, Alger 16: 189–238.
- Walter C (1926) Hydracariens du Maroc. Bulletin de la Société des Sciences Naturelles du Maroc 6(7–8): 129–157.