Published September 18, 2024
| Version v1
Dataset
Open
RNA oxidation in soybean seedlings in optimal conditions and under Cd treatment
Authors/Creators
- 1. Uniwersytet im Adama Mickiewicza w Poznaniu
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2.
Collegium Da Vinci
Description
The project aims at identification of oxidized (8-hydroxyguanosine, 8-OHG, 8-oxoG enriched) transcripts in soybean seedlings grown in control (optimal) conditions and exposed to Cd at the concentration 10 mg/l for 2 h.
The transcripts were identified through Illumina sequencing.
The raw data are submitted in the NCBI database under the proejct: PRJNA1158244.
The genes were annotated to soybean genome derived from Ensembl Plants (http://plants.ensembl.org/index.html) using featureCounts.
The list of identified genes is included in the attached Excel file.
Files
Cd_vs_OxyCd_raw.csv
Additional details
Funding
- National Science Centre
- The new insights into plant epitranscriptomics – assessment of 8-hydroxyguanosine (8-OHG) involvement in soybeans response to metal stress. 2019/33/B/NZ9/00058