Cilia structure and intraflagellar transport differentially regulate sensory response dynamics within and between C. elegans chemosensory neurons

List of data with corresponding files

Figure 1

A)    File name: Figure 1A- ASH_IFT_mutants_length_copy.pzfx

B)    File names: (Folder) ASH_1Mglycerol_IFT_mutants and (Folder) ASH_10-2IAA_IFT_mutants

C)    File names: (Folder) ASH_1Mglycerol_IFT_mutants > Peak_responses and (Folder) ASH_10-2IAA_IFT_mutants > Peak_responses - first pulse

D)   File names: Figure 1D – ASH Cher and Marianas Lengths Truncation osm-3(ts) 27 and 30 degree graph and Figure 1D – ASH Cher and Marianas Lengths Truncation osm-3(ts) 27 degrees

E)    File name: Figure 1E – ASH IFT Quantification.xlsx

F)    File name: (Folder) ASH_1Mglycerol_osm3ts

G)   File names: Figure 1 – Glycerol_Assays_Data.pzfx and Figure 1 – Glycerol_Assays_Data.xlsx

H)   File name: Figure 1H – ALL ASH Marianas and Cher Lengths che-3(nx159ts)

I)     File names: Figure 1- ASH IFT PY12007 v AP457 and Figure 1- ASH IFT PY12007 v AP457.xlsx

J)    File name: (Folder) ASH_1Mglycerol_che3ts

K)   File names: Figure 1 – Glycerol_Assays_Data.pzfx and Figure 1 – Glycerol_Assays_Data.xlsx

Figure 2

B)  File name: (Folder) 10-7Diacetyl_Calcium_IFT_mutants

C)  File names: (Folder) 10-6Pyrazine_Calcium_IFT_mutants and (Folder) 10-7Pyrazine_Calcium_IFT_mutants

D)  File names: (Folder) Microfluidics > (Folder) 10-6pyrazine and (Folder) 10-7diacetyl

E)  File names: (Folder) Microfluidics > Diacetyl_Chemotaxis_index_osm6_osm3kap1.pzfx and Pyrazine_Chemotaxis_index_pyrazine_osm3kap1_osm6.pzfx

G)  File name: (Folder) 10-6Pyrazine_Calcium_misexpression

Figure 3

A)   File name: Figure 3A- AWA IFT AP303 v AP379.xlsx

C)  File names: (Folder) AWA_Calcium_Diacetyl and (Folder) AWA_Calcium_Pyrazine

D)  File names: (Folder) AWA_Calcium_Diacetyl and (Folder) AWA_Calcium_Pyrazine

E)  File name: Figure 3E- SRX64 and ODR10 within dendritic branches.pzfx

Figure 4

A)   File name: (Folder) AWA_Calcium_Diacetyl_grk2

B)   File name: (Folder) AWA_Calcium_Pyrazine_grk2

C)   File name: (Folder) Microfluidics_diacetyl

D)   File name: (Folder) Microfluidics_pyrazine

E)    File name: Figure 4E- GRK2tRFP_kap1osm3ts.pzfx

Figure 5

A)   File names: (Folder) AWA_Diacetyl_Adaptation_osm3ts and (Folder) AWA_Pyrazine_Adaptation_osm3ts

B)    File name: Figure 5B and S7B- FRAP.pzfx

C)    File names: Figure 5C- SRX64_bbs7jhu590.pzfx and Figure 5C- SRX64_bbs7ok1351.pzfx and Figure 5C- oy158_bbs7jhu590.pzfx and Figure 5C- oy158_bbs7ok1351.pzfx

D)   File names: (Folder) AWA_Diacetyl_Adaptation_bbs7 and (Folder) AWA_Pyrazine_Adaptation_bbs7

E)    File name: Figure 5E- Marianas_EV_ODR10_SRX64_osm3tskap1.pzfx

Figure S1

A)   File names: (Folder) ASH_IFTmutants_0.5and2Mglycerol > (Folder) 0.5Mglycerol and (Folder) 2Mglycerol

B)    File names: (Folder) ASH_IFTmutants_quinine > (Folder) 5mM_quinine and (Folder) 10mM_quinine

C)    File name: ASH_IAA_t1/2

D)   File names: (Folder) ASH_IFTmutants_heptanol > (Folder) 10-3_heptanol and (Folder) 10-4_heptanol

E)    File names: (Folder) ASH_IFTmutants_2Mglycerol_GABA and (Folder) ASH_IFTmutants_2Mglycerol_bicuculline

Figure S2

B)    File name: Figure S2B- Dye-filling_data

C)    File name: Figure S2C- ASH_IFT_mutants_length.pzfx

D)   File names: Figure S2D- ASH IFT PY6345 v PY12007 and Figure S2D- ASH IFT Quantification

Figure S3

A)   File name: (Folder) AWA_10-7Diacetyl_IFTmutants

B)    File names: (Folder) AWA_Calcium_heptanone > (Folder) 10-4_heptanone and (Folder) 10-5_heptanone

C)    File name: (Folder) AWA_10-5Pyrazine_IFTmutants

D)   File names: (Folder) AWA_Calcium_methylpyrazine > (Folder) 10-8_methylpyrazine and (Folder) 10-9_methylpyrazine

E)    File name: Figure S3- Chemotaxis IFT_mutants.pzfx

Figure S4

A)  File name: Figure S4A – AP419_pyrazine_Chemotaxis.pzfx

C)  File name: Figure S4C – srx64SL2gfp_osm5.pzfx

Figure S6

A)   File names: Diacetyl_prism_decay_grk2 and Pyrazine_prism_decay_grk2

Figure S7

 A)  File name: (Folder) AWA_Calcium_Adaptation_diacetyl_IFT_mutant

 B)  File name: Figure 5B and S7B- FRAP

 C)  File name: Figure S7C- oy158_grk2_rescue.pzfx

 F)  File names: (Folder) AWA_Calcium_Adaptation_diacetyl_grk2 > (Folder) grk2 and (Folder) grk2bbs7double

Additional materials

            All code is listed under Code from Github > MF.matR-master and Additional Methods