Cross-tissue eQTL enrichment of associations in schizophrenia

non-CNS data used in the study.

the original data these were generated from have been deposited in the European Genome-phenome Archive (EGA) under accession EGAS00001000805.

complete files (all associations):
org/blood_cis_all.gz (whole blood)
org/fat_cis_all.gz (adipose)
org/lcl_all_cis.gz (LCLs)
org/skin_cis_all.gz (epidermal)

e-gene files (best association per gene at FDR < 0.01):
org/eQTL.B.Peer50.FDR01 (whole blood)
org/eQTL.F.Peer50.FDR01 (adipose)
org/eQTL.L.Peer50.FDR01 (LCLs)
org/eQTL.S.Peer50.FDR01 (epidermal)

control variants (2m template) bed files:
fakeQTL_tw_blood.bed
fakeQTL_tw_fat.bed
fakeQTL_tw_lcl.bed
fakeQTL_tw_skin.bed

control variants (2m template) rs names:
fakeQTL_tw_blood.mrk
fakeQTL_tw_fat.mrk
fakeQTL_tw_lcl.mrk
fakeQTL_tw_skin.mrk

control variants (9m template) R data files:
fakeQTL9m_tw_blood.RData
fakeQTL9m_tw_fat.RData
fakeQTL9m_tw_lcl.RData
fakeQTL9m_tw_skin.RData

control variants (9m template) matlab files:
fakeQTL9m_tw_blood.mat
fakeQTL9m_tw_fat.mat
fakeQTL9m_tw_lcl.mat
fakeQTL9m_tw_skin.mat

if you use these data, please cite the data sources:

Genetic interactions affecting human gene expression identified by variance association mapping. Brown, A.A., Buil, A., Viñuela, A., Lappalainen, T., Zheng, H.-F., Richards, J.B., Small, K.S., Spector, T.D., Dermitzakis, E.T. and Durbin, R. (2014). eLife 2014;3:e01381 doi: 10.7554/eLife.01381

Gene-gene and gene-environment interactions detected by transcriptome sequence analysis in twins. Buil, A., Brown, A.A., Lappalainen, T., Vinuela, A., Davies, M.N., Zheng, H.-F., Richards, J.B., Glass, D., Small, K.S., Durbin, R. et al. (2015) Nat Genet, 47, 88-91.