Published August 6, 2018
| Version v1
Journal article
Open
BiG-SCAPE/CORASON tutorial
Authors/Creators
- Navarro, Jorge
- Selem, Nelly
- Mullowney, Michael
- Cruz-Morales Pablo
- Parkinson Elizabeth
- Tryon Hudson
- Kautsar Satria
- De Los Santos Emmanuel L.C.
- Yeong Marley
- Abubucker Sahar
- Roeters Arne
- Lokhorst Wouter
- Fernandez-Guerra Antonio
- Dias Cappelini Luciana Teresa
- Thomson Regan
- Metcalf William W.
- Kelleher Neil L.
- Barona-Gomez Francisco
- Medema Marnix H.
Description
This is a set of genome and biosynthetical gene clusters (BGCs) data used to ilustrate BiG-SCAPE and CORASON genome mining pipelines. Data are stored in files with the gbk format and organized here in two directories as follows:
i) genomes.tar.gz
14 Actinobacteria genome files (gbk files)
1 Spectinomycin BGC from MIBiG database (gbk file)
ii) gbk.tar.gz
22 BGCs selected from the antiSMASH output of the 14 genomes in genome directory.
1 Spectinomycin BGC from MIBiG database (gbk file)