Published 2024 | Version v2

Transcriptional difference of deep sea microorganisms under different sampling methods

Authors/Creators

  • 1. ROR icon Tsinghua University

Description

This dataset comprises the non-rRNA metatranscriptome and Metagenomic Assembled Genomes (MAGs) utilized in the research project titled "Transcriptional Differences of Deep Sea Microorganisms Under Different Sampling Methods."

The version 1 of this dataset includes non-rRNA metatranscriptome and sequence of MAGs. The non-rRNA metatranscriptome includes a total of 20 FASTQ files, which consist of both forward and reverse sequences. These files are categorized into the following groups: MIS1-clean, MIS2-clean, MIS3-clean, MIS4-clean, MIS5-clean, MIS6-clean, NIS1-clean, NIS2-clean, ISMF-clean, and ISMU-clean. The MAGs dataset contains all MAGs generated during the research.

The version 2 of this dataset includes a comprehensive table that provides quality metrics for the MAGs, including information on completeness, contamination, total assembly length, and the number of contigs. Additionally, version 2 datasets includes files ending with .faa that contain the amino acid sequences for each MAG, as well as files ending with .txt specifically contain the annotation information for each MAG based on alignment with the KEGG database.

Files

Amino acid sequences and the respective annotation of each MAG.zip

Files (186.7 MB)

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md5:322f5ca7205382798e9544e7403694fd
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Additional details

Dates

Available
2024-09-09