Data for "Neural space-time model for dynamic multi-shot imaging"

Data for "Neural space-time model for dynamic multi-shot imaging"

Link to preprint: https://www.biorxiv.org/content/10.1101/2024.01.16.575950

Code: https://github.com/rmcao/nstm

Raw images from structured illumination microscopy (SIM):

• beads.tif: a dense microbead sample with vibrating motion (Fig.2)
• mito.tif: a live RPE-1 cell expressing StayGold-tagged mitochondrial matrix protein (Fig.3)
• er.tif: a RPE-1 cell expressing StayGold-tagged endoplasmic reticulum (Fig.4)
• f-actin.tif: a live RPE-1 cell tagged with F-Actin Halo-JF585 (Extended Data Fig.6)
• f-actin_extradelay.tif: a live RPE-1 cell tagged with F-Actin Halo-JF585 with extra time delay between rotations (Extended Data Fig.6)

Baseline reconstruction:

• beads_fairSIM.tif: conventional reconstruction of the dense microbead sample using fairSIM software (https://www.fairsim.org)
• mito_cudasirecon.tif: conventional reconstruction for a mitochondria-labeled cell (mito.tif) using cuda-accelerated SIM reconstruction software (https://github.com/scopetools/cudasirecon)
• er_cudasirecon.tif: conventional reconstruction for an endoplasmic reticulum-labeled cell (er.tif) using cuda-accelerated SIM reconstruction software
• f-actin_cudasirecon.tif: conventional reconstruction for a F-Actin Halo-JF585 labeled cell (f-actin.tif) using cuda-accelerated SIM reconstruction software
• f-actin_extradelay_cudasirecon.tif: conventional reconstruction for a F-Actin Halo-JF585 labeled cell with extra delay (f-actin_extradelay.tif) using cuda-accelerated SIM reconstruction software