SRR606249 spiked with fungal and viral Illumina reads at 1x, 10X, and 100X
Description
SRR606249 spiked with fungal and viral Illumina reads at 1x, 10X, and 100X using the ART simulator.
See also: https://osf.io/dm938/ and https://dahak-metagenomics.github.io/
Fungal and viral genomes used for computational spike-ins.
Kingdom Organism Accession Link
Fungus Candida albicans SC5314 NC_032089.1 https://www.ncbi.nlm.nih.gov/genome/?term=Candida+albicans
Fungus Cryptococcus neoformans var. grubii H99 NC_026745.1 https://www.ncbi.nlm.nih.gov/genome/?term=Cryptococcus+neoformans
Fungus Aspergillus fumigatus Af293 NC_007194.1 https://www.ncbi.nlm.nih.gov/genome/?term=Aspergillus+fumigatus
Fungus Histoplasma capsulatum NAm1 NW_001813913.1 https://www.ncbi.nlm.nih.gov/genome/?term=Histoplasma+capsulatum
Virus Human immunodeficiency virus 1 NC_001802.1 https://www.ncbi.nlm.nih.gov/genome/10319
Virus Influenza A virus (A/New York/392/2004(H3N2)) NC_007373.1 https://www.ncbi.nlm.nih.gov/genome/10290
Virus Marburg virus - Musoke, Kenya, 1980 NC_001608.3 https://www.ncbi.nlm.nih.gov/genome/5314
Virus Ebola virus - Mayinga, Zaire, 1976 NC_002549.1 https://www.ncbi.nlm.nih.gov/assembly/GCF_000848505.1/
Files
Files
(31.4 GB)
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md5:02063738526ec1b5b263dd81bdf7d5ef
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4.2 GB | Download |
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md5:48072fa092122e860b92eeac7ebb1214
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md5:5806d2db14f728df24d7ce780dadfd38
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md5:2cce9f317907d4ecff5c99d0b8198d87
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md5:64d3f7706b2671f691133165086d6c6b
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md5:bc828f40e6a1d71d5230b9c41d683a13
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7.2 GB | Download |