Published November 27, 2014 | Version v1
Software Open

Bio-ViennaNGS: Bio::ViennaNGS v0.10

Authors/Creators

  • 1. University of Vienna
  • 2. Institute for Theoretical Chemistry, University of Vienna
  • 3. TBI

Description

  • requires Perl >= 5.12.0
  • added sortbed()
  • added uniquify_bam()
  • added scripts/bam_uniq.pl
  • added scripts/sj_visualizer.pl
  • refactored scripts/motiffinda.pl
  • removed development version of scripts/assembly_hub_constructer.pl
  • made scripts/gff2bed.pl work with OO Bio::ViennaNGS::AnnoC
  • removed get_stranded_subsequence (now lives in Bio::ViennaNGS::Fasta)
  • updated POD

Files

Bio-ViennaNGS-v0.10.zip

Files (33.7 kB)

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Additional details

Related works

Is supplement to
https://github.com/mtw/Bio-ViennaNGS/tree/v0.10 (URL)