Published July 29, 2024 | Version v1
Dataset Open

Additional data for publication: Simple protocol for combined extraction of exocrine secretions and RNA in small arthropods.

Authors/Creators

  • 1. ROR icon University of Graz

Description

Additional data and results are given in this repository. It contains the trimmed reads (fastp; raw reads also on SRA accession numbers SRR29851544-SRR29851549, Bioproject PRJNA1136254), full busco reports for individual transcriptomes, assembly of all six RNAseqs together (transcriptome as base for differential expression analysis) and results of salmon.

Files

Files (22.5 GB)

Name Size
md5:e65765d85fc6182f0247b4c4db6c696a
458.5 MB Download
md5:879a45b5a68180f596f9ab42e6e7abb5
47.1 MB Download
md5:07a48bd144269c3b8c33c184b8435163
21.6 GB Download
md5:19b79808de4b46a9c78993723b8012f3
390.8 MB Download

Additional details

Related works

Has metadata
Workflow: 10.17504/protocols.io.n92ld8mb7v5b/v1 (DOI)
Is metadata for
Publication: 10.1093/biomethods/bpae054 (DOI)

Funding

FWF Austrian Science Fund
Diversification in Exocrine Systems 10.55776/P33629
FWF Austrian Science Fund
Small Molecules from Arthropods 10.55776/P33840

References

  • David Fröhlich, Michaela Bodner, Günther Raspotnig, Christoph Hahn, Simple protocol for combined extraction of exocrine secretions and RNA in small arthropods, Biology Methods and Protocols, Volume 9, Issue 1, 2024, bpae054, https://doi.org/10.1093/biomethods/bpae054