Published November 20, 2024 | Version v1

External cavity quantum cascade laser vibrational circular dichroism spectroscopy for fast and sensitive analysis of proteins at low concentrations (Data analysis)

  • 1. TU Wien
  • 2. Technische Universität Wien Fakultät für Technische Chemie
  • 3. NIST Center for Nanoscale Science and Technology

Description

This record contains a docker container image of the data evaluation shown in the publication "External cavity quantum cascade laser vibrational circular dichroism spectroscopy for fast and sensitive analysis of proteins at low concentrations". The evaluations can be accessed by running the container and accessing the contained Jupyter Lab via a browser. The calculations are contained in 'Eval_protein_D2O.ipynb'.

To run the container (requires docker):

1.download 'd2o_vcd.tar'

2. in the command line, execute 'docker load -i d2o_vcd.tar'. This will return something like 'Loaded image: <image_name>' with image_name probably being "drhermann/vcd_d2o_00:trial_03"

3. then 'docker run -p 8889:8889 <image_name>' replacing the brackets with the actual name of the image, such as drhermann/vcd_d2o_00:trial_03

4.In your command line a link starting in 'http://127.0.0.1:8888/lab?token=...' will appear. Open this link in your browser to access the evaluation.

Notes

This work has received funding by the Austrian Wirtschafts- 516
service (AWS, project no. P2389335).

Files

Files (2.3 GB)

Name Size
md5:fd955cbb500f617f9550cac37daa755a
2.3 GB Download

Additional details

Related works

Is published in
Publication: 10.1021/acs.analchem.4c03498 (DOI)

Funding

European Commission
Tumor-LN-oC - Tumor and Lymph Node on Chip for cancer studies 953234
FWF Austrian Science Fund
Advancing QCL-IR spectroscopy of proteins for DSP monitoring P 32644
Christian Doppler Research Association