Published June 26, 2024
| Version v1
Dataset
Open
RNA velocity analysis of the integrated single cell atlas of neural crest lineages along the posterior developing zebrafish
Description
H5AD files of an RNA velocity analysis of the integrated single cell atlas of neural crest lineages along the posterior developing zebrafish . For this, we have used Velocyto and scVelo. The notebooks to reproduce the scVelo part are here https://github.com/brunicardoso/e-signal-lab/blob/main/scvelo_sox10_integration48_68h__Uribe_using_original_seurat_metadata.ipynb .
This analysis was based on data published here https://elifesciences.org/articles/60005
Files
Files
(3.2 GB)
| Name | Size | |
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md5:03f1c727b457f16270998c1761b07861
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3.2 GB | Download |
Additional details
Related works
- Cites
- Dataset: 10.7554/eLife.60005 (DOI)
Dates
- Available
-
2024-03-20