Published April 17, 2018
| Version v1
Dataset
Open
Simulation CER160_50_POPC_512_TM3_D202A_10_5up_5down_NaCl_150mM_310K (rep2)
Authors/Creators
- 1. Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
Description
Title publication: A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino Acid Transporter Interaction
Year publication: 2018
DOI publication: XXXXX
Description: Simulation POPC membrane containing ~8 mol% ceramide (CER160) and ten LAPTM4B-TM3 peptides with a D202A mutation using charmm36 at 310K.
MD engine: 2016.2-dev-20170105-4feb0be
Force field: charmm36
Temperature: 310 K
Pressure: 1 bar
Simulation time: 2913 ns
Saving frequency: 100 ps
Molecular content:
TM3_D2A 10
POPC 512
CER160 50
SOL 28090
NA 75
CL 75
Additional information:
* Membrane containing LAPTM4B TM3 peptides with a D202A mutation.
Files
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