Published June 20, 2024
| Version v4
Dataset
Open
Human intestinal Bacteria Collection (HiBC): 16S rRNA gene sequences
Authors/Creators
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Hitch, Thomas C. A.1
- Masson, Johannes M.1
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Pauvert, Charlie1
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Bosch, Johanna1
- Nüchtern, Selina1
- Treichel, Nicole1
- Baloh, Marko1
- Razavi, Soheila1
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Afrizal, Afrizal1
- Kousetzi, Ntana1
- Aguirre, Andrea M.1
- Wylensek, David1
- Coates, Amy1
- Jennings, Susan A. V.1
- Panyot, Atscharah1
- Viehof, Alina1
- Schmitz, Matthias A.1
- Stuhrmann, Maximilian1
- Deis, Evelyn C.1
- Bisdorf, Kevin1
- Cramer, Thorsten1
- Lissin, Arthur2
- Schober, Isabel2
- Witte, Julius2
- Riedel, Thomas2
- Wende, Marie3
- Winter, Katrin A.3
- Riva, Alessandra4, 5
- Trinh, Stefanie1
- Mitchell, Laura6
- Hartman, Jonathan7
- Berry, David4
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Bossert, Lukas C.7
- Allers, Thorsten6
- Seitz, Jochen8
- Strowig, Till3, 9, 10
- Abt, Birte2, 9
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Reimer, Lorenz C.2
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Overmann, Jörg2, 9, 11
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Clavel, Thomas1
- 1. University Hospital of RWTH Aachen
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2.
Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures
- 3. Helmholtz Centre for Infection Research
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4.
University of Vienna
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5.
Technical University of Munich
- 6. University of Nottingham
- 7. RWTH Aachen University
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8.
University of Duisburg-Essen
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9.
German Center for Infection Research
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10.
Medizinische Hochschule Hannover
- 11. Technical University Braunschweig
Description
The Human intestinal Bacteria Collection (HiBC) is a collection of bacterial strains, isolated from the human gut for which 16S rRNA gene sequences, genome sequences and culture conditions are made available to the research community. In addition to previously described bacteria, we include strains that represent novel species which have been taxonomically described and validly named, or will be in the future. This collection will be updated regularly.
This dataset includes the sequences of the 16S rRNA gene sequences of the isolates in the FASTA nucleotide format. Sequences ending in Sanger were obtained using the Sanger dideoxy sequencing technology. Sequences ending in Genome were obtained from the genome sequence using barrnap.
Files
HiBC_16S_rRNA_gene_sequences_20240620.zip
Files
(223.0 kB)
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Additional details
References
- Hitch et al. 2025 "HiBC: a publicly available collection of bacterial strains isolated from the human gut". Nature Communications 16, 4203. https://doi.org/10.1038/s41467-025-59229-9
- Hitch et al. "Broad diversity of human gut bacteria accessible via a traceable strain deposition system". bioRxiv 2024.06.20.599854. https://doi.org/10.1101/2024.06.20.599854