Virtual ChIP-seq predictions for TF binding in Cistrome and ENCODE-DREAM datasets

Each gzipped tarball contains BED files of Virtual ChIP-seq posterior probabilities.

Each BED file corresponds to binding of a TF in one chromosome (one of chr5, chr10, chr15, and chr20) in a validation cell type of Cistrome (virchipCistromePredictions_V2.0.0.tar.gz) or ENCODE-DREAM Challenge datasets (virchipDreamPredictions_V1.0.0.tar.gz).

V2.0.0 update:

• We provided our predictions on ENCODE-DREAM Challenge validation chromosomes (chr1, chr8, and chr21) in virchipDreamPredictions_V2.0.0.tar.gz
• FOXA1 predictions for binding in ch5 and chr10 of liver, and CTCF predictions for binding in chr10 of MCF-7 were missing from virchipCistromePredictions_V1.0.0.tar.gz