Published March 8, 2018
| Version v1
Dataset
Open
Brownian Dynamics simulations of yeast Nuclear Pore Complex FG repeats
Authors/Creators
- Kim, Seung Joong1
- Fernandez-Martinez, Javier2
- Nudelman, Ilona2
- Shi, Yi3
- Zhang, Wenzhu3
- Raveh, Barak1
- Herricks, Thurston4
- Slaughter, Brian D.5
- Hogan, Joanna6
- Upla, Paula7
- Chemmama, Ilan E.1
- Pellarin, Riccardo1
- Echeverria, Ignacia1
- Shivaraju, Manjunatha5
- Chaudhury, Azraa S.2
- Wang, Junjie3
- Williams, Rosemary2
- Unruh, Jay R.5
- Greenberg, Charles H.1
- Jacobs, Erica Y.3
- Yu, Zhiheng8
- de la Cruz, M. Jason8
- Mironska, Roxana2
- Stokes, David L.7
- Aitchison, John D.9
- Jarrold, Martin F.6
- Gerton, Jennifer L.5
- Ludtke, Steven J.10
- Akey, Christopher W.11
- Chait, Brian T.3
- Sali, Andrej1
- Rout, Michael P.2
- 1. Department of Bioengineering and Therapeutic Sciences, Department of Pharmaceutical Chemistry, and California Institute for Quantitative Biosciences, University of California, San Francisco, San Francisco, CA 94158, USA
- 2. Laboratory of Cellular and Structural Biology, The Rockefeller University, New York, NY 10065, USA
- 3. Laboratory of Mass Spectrometry and Gaseous Ion Chemistry, The Rockefeller University, New York, NY 10065, USA
- 4. Institute for Systems Biology, 401 Terry Ave. N., Seattle, WA 98109, USA
- 5. Stowers Institute for Medical Research, Kansas City, MO 64110, USA
- 6. Department of Chemistry, Indiana University, Bloomington, IN 47405, USA
- 7. Skirball Institute and Department of Cell Biology, New York University School of Medicine, New York, NY 10016, USA
- 8. Janelia Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, Virginia, 20148, USA
- 9. Institute for Systems Biology, 401 Terry Ave. N., Seattle, WA 98109, USA; Center for Infectious Disease Research, Seattle, WA, USA
- 10. National Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX 77030, USA
- 11. Department of Physiology and Biophysics, Boston University School of Medicine, 700 Albany Street, Boston, MA 02118, USA
Contributors
Data manager:
- 1. Department of Bioengineering and Therapeutic Sciences, Department of Pharmaceutical Chemistry, and California Institute for Quantitative Biosciences, University of California, San Francisco, San Francisco, CA 94158, USA
Description
The files in this folder can be used to reproduce the Brownian Dynamics simulations of FG repeats using IMP as described in Kim et al., 2018.
Files
npc_fg_2018-master.zip
Files
(58.6 MB)
| Name | Size | Download all |
|---|---|---|
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md5:4cc798b918440f50847285a04ffe579b
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58.6 MB | Preview Download |
Additional details
Related works
- Is identical to
- https://github.com/integrativemodeling/npc_fg_2018 (URL)