Published May 31, 2024 | Version v1
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Data (2) with paper "Size Laws and Division Ring Dynamics in Filamentous Escherichia coli cells"

Authors/Creators

  • 1. Hubrecht Institute
  • 2. Delft University of Technology
  • 3. AMOLF

Description

See also: https://zenodo.org/records/11401115

Data files related to manuscript:

Wehrens M, Ershov D, Rozendaal R, Walker N, Schultz D, Kishony R, Levin PA, Tans SJ (2018). “Size Laws and Division Ring Dynamics in Filamentous Escherichia coli cells”. Current Biology.

https://doi.org/10.1016/j.cub.2018.02.006

 

Scripts are available at:

https://github.com/TansLab/Tans_filamentation

 

And you will also need the additional scripts from the repositories:

https://github.com/TansLab/Common_libraries

https://github.com/TansLab/Tans_Schnitzcells

 

Script that generates figures:

https://github.com/TansLab/Tans_filamentation/blob/master/ershovwehrensallfigures.m

 

And more specifically, data is loaded, (partially analyzed,) and plotted here:

https://github.com/TansLab/Tans_filamentation/blob/master/script20160429_filamentRecoveryDivisionRatioss.m

 

Figure 3

 

See also

https://github.com/TansLab/Tans_filamentation/blob/master/ershovwehrensallfigures.m

https://github.com/TansLab/Tans_filamentation/blob/master/script20160422_filamentRecoveryFtslabelLocations.m

 

Related files:

Data files for cell morphology properties

2016-04-07_FilaRecovery_asc777/pos2crop/data/pos2crop-skeletonData.mat

2016-04-07_FilaRecovery_asc777/pos3crop/data/pos3crop-skeletonData.mat

 

Data files with fluorescence data

2016-04-07_FilaRecovery_asc777/pos2crop/analysis/straightenedCells/2016-04-07pos2crop_straightFluorData.mat

2016-04-07_FilaRecovery_asc777/pos3crop/analysis/straightenedCells/2016-04-07pos3crop_straightFluorData.mat

 

Data files with division and lineage data (also supplied above)

2016-04-07_FilaRecovery_asc777/pos2crop/data/pos2crop-Schnitz.mat

2016-04-07_FilaRecovery_asc777/pos3crop/data/pos3crop-Schnitz.mat

 

Supplemental figure with nucleoid data

 

See also

https://github.com/TansLab/Tans_filamentation/blob/master/ershovwehrensallfigures.m

https://github.com/TansLab/Tans_filamentation/blob/master/script20160422_filamentRecoveryFtslabelLocations.m

 

Related files:

Data files for cell morphology properties

2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/data/pos1cropd-skeletonData.mat

2017-10-12_FilaRecovery_hupA-mRuby2/pos1cropa2/data/pos1cropa2-skeletonData.mat

 

Data files with fluorescence data

2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/analysis/straightenedCells/2017-11-08pos1cropd_straightFluorData.mat

2017-10-12_FilaRecovery_hupA-mRuby2/pos1cropa2/analysis/straightenedCells/2017-10-12pos1cropa2_straightFluorData.mat

 

Data files with division and lineage data (also supplied above)

2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/data/pos1cropd-Schnitz.mat

2017-10-12_FilaRecovery_hupA-mRuby2/pos1cropa2/data/pos1cropa2-Schnitz.mat

 

Lookup data file: 2017-11-08_FilaRecovery_asc1106_hupA-mCherry/pos1cropd/data/slookup.mat

Files

DATA-FTSA.zip

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