Published May 22, 2024
| Version v1
Dataset
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Alvinella pompejana genome and protein data
Authors/Creators
Description
The genome of the hydrothermal vent annelid Alvinella pompejana
Sami El Hilali, Philippe Dru, Alan Le Moan, Yang I Li, Martijn A. Huynen, André Hoelz, Robert C. Robinson, José M. Martín-Durán, Didier Jollivet, Adam Claridge-Chang, Richard R. Copley
Files relating to the genome sequence of Alvinella pomepejana.
See paper in bioRxiv for full descriptions:
https://doi.org/10.1101/2024.06.25.600561
a_pom_assembly - genomic DNA assembly, all scaffolds
Apom.EVM_gene_models.gff3 - gene models
a_pom_proteins - predicted proteins, one per gene
metagenome_proteins.fasta - binned proteins from assembly of Alvinella Illumina reads (see ms for details)
AP_polymorphism_filtered.recode.vcf.gz - polymorphism data
Files
Additional details
Funding
- International Human Frontier Science Program Organization
- The architecture of the postsynaptic density RGP0028/2018