Published May 20, 2024
| Version v1
Dataset
Open
TAM Atlas (Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response)
Authors/Creators
-
1.
University College London
-
2.
The Francis Crick Institute
-
3.
University of Sheffield
Description
Included is the TAM atlas associated with the publication "Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response".
The atlas is a Seurat (v 4.2.0) object stored as a .rds file, which can be loaded in R (v 4.2.2).
Note this atlas does not include raw count data as these can be download from the original sources, but does include log-normalized count data, SCTransformed data and integrated data via RPCA.
The data can be loaded into R as follows:
mac.atlas <- readRDS('mac.atlas.zenodo.200524.rds')
Files
Files
(19.7 GB)
| Name | Size | |
|---|---|---|
|
md5:49d3bea7addd7fcd07d8e3843ca901c2
|
19.7 GB | Download |
Additional details
Software
- Repository URL
- https://github.com/alexcoulton/macrophage-atlas