Published June 25, 2024 | Version v2
Dataset Open

Reference genome data used for benchmarking SingleM

Authors/Creators

  • 1. Queensland University of Technology

Description

For use as part of https://github.com/wwood/singlem-benchmarking/

Files

Files (4.8 GB)

Name Size
md5:e699cff9851e3d88206cd712b4f2411f
187.8 MB Download
md5:0b80173f1225336018ce20d07ba4af1a
4.6 GB Download

Additional details

Funding

Australian Research Council
Discovery Early Career Researcher Award - Grant ID: DE160100248 DE160100248
Australian Research Council
Global integration of microbial community and climate data DP230101171
Australian Research Council
ARC Future Fellowships - Grant ID: FT210100521 FT210100521
U.S. National Science Foundation
BII-Implementation: The EMERGE Institute: Identifying EMergent Ecosystem Responses through Genes-to-Ecosystems Integration 2022070

References

  • SingleM and Sandpiper: Robust microbial taxonomic profiles from metagenomic data Ben J. Woodcroft, Samuel T. N. Aroney, Rossen Zhao, Mitchell Cunningham, Joshua A. M. Mitchell, Linda Blackall, Gene W. Tyson bioRxiv 2024.01.30.578060; doi: https://doi.org/10.1101/2024.01.30.578060