Published April 19, 2024 | Version v1
Dataset Open

Synthetic human/mouse transcriptome/genome

Authors/Creators

  • 1. ROR icon The Ohio State University Wexner Medical Center

Contributors

  • 1. ROR icon The Ohio State University Wexner Medical Center

Description

Fragmented genome and transcript models to mimic illumina 125 bp paired-end reads using the human T2T-CHM13v2.0 and mouse GRCm39 assemblies. 

Files

Files (25.9 GB)

Name Size
md5:ccfb1614024ba9f4c0fc42952e527f3d
2.9 GB Download
md5:9ffc533826904faa876f1586e5bde370
11.8 GB Download
md5:afbdc8a81ba00ae48291c4fa2a704e5d
2.2 GB Download
md5:5b9274657f9835a35ca80e192171b48e
9.0 GB Download

Additional details

Related works

Is part of
Software: 10.5281/zenodo.10906133 (DOI)

Funding

American Lung Association
Adenosine as a mediator of tumor and tumor-microbiome interactions in non-small cell lung cancer 1046611
National Institute on Aging
The microbiome in older adults with lung cancer association of treatment regimens and diet with protective microbial profiles K01AG070310

Dates

Available
2024-04-30

Software

Repository URL
https://github.com/spakowiczlab/exotic
Programming language
R
Development Status
Active