Published April 17, 2024
| Version V1.0.0
Dataset
Open
BioPropaPhenKG Towards Monkeypox and COVID-19 Case Tracing and Analysing
Authors/Creators
-
1.
Laboratoire d'Informatique, du Traitement de l'Information et des Systèmes
Description
This repository contains:
- The BioPropaPhen ontology created from PropaPhen, being specialized with UMLS and World Knowledge Graph ontologies;
- A neo4j 4.4.3 dump file of the BioPropaPhenKG knowledge graph with WHO ground truth data about COVID-19 and Monkeypox, and enhanced presence edges between UMLS entities to World KG entities for evaluating the Description-Detection-Prediction Framework
The datasets used for enhancing the KG are:
| Phenomenon | Dataset | Period | Documents | Source | Link |
| COVID-19 | Aylien | Nov-2019 | 8 | Online News | ttps://aylien.com/resources/datasets/coronavirus-dataset |
| COVID-19 | CORD-19 | Dec-2019 | 720 | Medical Articles | https://allenai.org/data/cord-19 |
| COVID-19 | RedditCOVID | Feb-2020 | 4,980 | Social Media | https://paperswithcode.com/dataset/the-reddit-covid-dataset |
| Monkeypox | Mined from BBC | May-2022 | 27 | Online News | |
| Monkeypox | Mined from Pubmed | June-2022 | 36 | Medical Articles | |
| Monkeypox | MonkeyPox2022 | May-2022 | 33,826 | Social Media | https://doi.org/10.3390/idr14060087 |