Published April 9, 2024
| Version v1
Dataset
Open
MD simulation of POPC bilayer with OPLS4 force field. 7.5 w/l.
Authors/Creators
Description
MD simulation of POPC (1-palmitoyl-2-oleoyl-phosphatidylcholine) bilayer with OPLS4 force field. 7.5 w/l
Dataset contains original desmond trajectories (_trj), topologies (-out.cms), input files (.cfg, .msj, .cms), and other files
For the ease of the upload, trajectory files (_trj) are divided to 250ns pieces and tarred (named desmond_md_popc7.5wl_opls4_x-xns_trj.tar.gz)
Dataset also contains Gromacs converted files (.xtc, .gro and .top)
System: POPC bilayer in water
Number of lipids: 200 (100/leaflet)
Number of waters: 1500
Simulation time: 500 ns
Simulation engine: Desmond 2022-2
Temperature: 300 K
Files
Files
(22.1 GB)
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md5:6206847b89a9c698eb35c1217dad224b
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771.2 kB | Download |
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md5:58c74b5e6d4dcd0e7922fa6a075670f3
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8.7 GB | Download |
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md5:d4b254a9d40411730e9a13b77bea3f57
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8.7 GB | Download |
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md5:316938fd8c85b947ba6c69805eb2e344
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10.0 MB | Download |
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md5:5849d6ea73d3911a309df9b9108fcfd5
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9.0 kB | Download |
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md5:777124c1fc947b18879727402047ae7a
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10.0 MB | Download |
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md5:085ff8346c35fb89fc250f58650e055f
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24.6 MB | Download |
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md5:f3082fa87bf948e06e7b25345879b96a
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8.2 MB | Download |
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md5:40fec12dc14a987e69419e8c7d09f178
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5.6 kB | Download |
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md5:eea4071f7d1bdc6e8454836d4cc36044
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2.2 MB | Download |
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md5:c083805258ab37c5c45983129c6f099b
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4.8 GB | Download |
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md5:7041e7be4975748778f91cfbd809822b
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15.2 kB | Download |