Published 2024
| Version v1
Dataset
Open
Vibrio cholerae pathogenicity island 2 encodes two distinct types of restriction systems 1/3
Authors/Creators
-
1.
École Polytechnique Fédérale de Lausanne
Description
This dataset is part of the paper "Vibrio cholerae pathogenicity island 2 encodes two distinct types of restriction systems" (Vizzarro et al., 2024). It includes PacBio Single Molecule, Real-Time (SMRT) sequencing performed at the Genomic Technology Facility of the University of Lausanne. In total, 10 strains were sequenced.
The aim of the sequencing was to obtain a comprehensive view of the genomic modifications of a selection of 7PET V. cholerae serogroup isolates. Subsequently, it allowed a comparison between different strains to identify a distinct methylation motif dependent on the Type 1 RM encoded by VPI-2.
The dataset is split into 3 submissions, with the present one being the first of the three (1/3).
Files
1503_ipd.txt
Files
(46.7 GB)
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md5:e243b2b776f20b8cda3ce4f91e30fccd
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md5:bb9c6fa634eb9682763d6d8a64bde14a
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7.1 GB | Download |
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md5:76d1062d35a668afa810e087590b3cca
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md5:7b35ed59faa78efb03a31adb14a1eeda
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md5:e1707538bf0eb1ebdd418396202301a3
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7.6 MB | Preview Download |
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md5:080ae91bc1daab55827742dc2feae6e8
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7.5 GB | Download |
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md5:b7c2f315e9c9505a3b624014afa3b770
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7.6 GB | Download |
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md5:294352eb3dea751c47bf4b7a4789aeb4
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9.1 GB | Download |
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md5:efc8e090b57157af830e00f6a04032ac
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251.2 kB | Download |
Additional details
Funding
- Howard Hughes Medical Institute
- International Research Scholarship 55008726
- Swiss National Science Foundation
- Individual grant 310030_185022