Published March 19, 2024 | Version v1

[PART 3] Design, Synthesis, and Development of dual CatL-Main Pro Inhibitors of SARS-CoV-2

  • 1. ROR icon German Center for Infection Research
  • 2. ROR icon University of Eastern Finland

Description

MD simulations of Mpro with respective inhibitors with different mutation backgrounds. For more details please check the respective JMC publication.

 

1291- Mpro 7TE0_WT_nirma 13A3 OPLS4
1292- Mpro 8H82_E166V_nirma 13A3 OPLS4 
1293- Mpro 8H7W_S144M_nirma 13A3 OPLS4 (originally 8H7W is S144A)
1294- Mpro WT FP237-xtal bound to 8n/FP238 non cov 13A3 OPLS4
1295- Mpro WT FP237-xtal bound to 8n/FP238 covbound 13A3 OPLS4
1296- Mpro E166V FP237-xtal bound to 8n/FP238 non cov 13A3 OPLS4
1297- Mpro E166V FP237-xtal bound to 8n/FP238 covbound 13A3 OPLS4
1298- Mpro S144M FP237-xtal bound to 8n/FP238 non cov 13A3 OPLS4
1299- Mpro S144M FP237-xtal bound to 8n/FP238 covbound 13A3 OPLS4
1300- Mpro 7TE0_WT_nirma (NON COV) 13A3 OPLS4 (200ns/day) - 10x200ns (gpu48_cov)

Files

relevantStructures.zip

Files (44.7 GB)

Name Size
md5:0dce09f53cb554505fc66711b5238ace
11.2 GB Download
md5:ef53148fa45e8a4843a926ae679728ae
11.1 GB Download
md5:298b0263794f520079d9afb3802b1510
10.2 GB Download
md5:be0f44acbb7fd76c08363b13769b4417
10.7 GB Download
md5:4155f458270b9ac3ec32c9a93bc23130
165.4 MB Download
md5:ccb77adaceeb787476f5abff03eee3ab
1.2 MB Download
md5:1adbbbfd038df5c932b3ac9e19cc1cc4
681.1 MB Download
md5:9c61a4447cb4899a5c54ea911bf352d9
612.4 MB Download
md5:03104685b9f7e29cef3b7b061fd65882
2.7 MB Preview Download