Published July 23, 2007 | Version 3109

The Resource Description Framework (RDF) as a Modern Structure for Medical Data

Description

The amount and heterogeneity of data in biomedical research, notably in interdisciplinary fields, requires new methods for the collection, presentation and analysis of information. Important data from laboratory experiments as well as patient trials are available but come out of distributed resources. The Charité - University Hospital Berlin has established together with the German Research Foundation (DFG) a new information service centre for kidney diseases and transplantation (Open European Nephrology Science Centre - OpEN.SC). Beside a collaborative aspect to create new research groups every single partner or institution of this science information centre making his own data available is allowed to search the whole data pool of the various involved centres. A core task is the implementation of a non-restricting open data structure for the various different data sources. We decided to use a modern RDF model and in a first phase transformed original data coming from the web-based Electronic Patient Record database TBase©.

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References

  • D. Krafzig, K. Banke, D. Slama. "Enterprise SOA. Service Oriented Architecture Best Practices." Prentice Hall PTR, 2004.
  • G. Lindemann, L. Fritsche. "Web-Based Patient Records - The Design of TBase2." In Bruch, Köckerling, Bouchard, Schug-Paß (Eds.) New Aspects of High Technology in Medicine; Seiten 409-414; 2000.
  • G. Lindemann, T. Schrader, D. Schmidt. "The Aim of the Open European Nephrology Science Center (OpEN.SC) - First Steps." In: Proceedings of "Concurrency, Specification & Programming" - CS&P2006; Vol. I, II, III. Informatik Berichte 206, Institute of Computer Science, Humboldt University Berlin, ISSN: 0863-95X, Germany, 2006.
  • F. Manola, E. Miller: http://www.w3.org/TR/2004/REC-rdf-primer- 20040210/ , visited June 2007.
  • B. McBride: http://www.w3.org/TR/2004/REC-rdf-concepts-20040210/ , visited June 2007.
  • E. Paslaru Bontas, S.Tietz, R.Tolksdorf, and T.Schrader. "Generation and Management of a Medical Ontology in a Semantic Web Retrieval System." [3290 / 2004]. Lecture Notes in Computer Science. R.Meersmann and Z.Tari, 2004.
  • A.-B. M. Salem. "Intelligent Technologies for Medical e-Learning." In: Proceedings of the Third International Conference on Intelligent Computing and Information Systems. Cairo, Egypt, 2007
  • T.Schrader, S.Niepage, T.Leuthold, K.Saeger, S.Hellmig, and P.Hufnagl. "Implementation of a pathology report compiler with integrated diagnostic path functionality in the Diagnostic Virtual Microscopy." Pathol Res Pract 200
  • , 356. 2004.
  • T.Schrader, P.Tietz, C.Tennstedt, M.Schwabe, T.-N.Nguyen-Dobinsky and P.Hufnagl. "Attributing images of interdisciplinary medical examinations in databases." E J Pathol 032 032-006. 2003. [10] K. Schröter, G. Lindemann, L. Fritsche: "TBase2 - A web-based Electronic Patient Record." Fundamenta Informaticae 43, 343-353, IOS Press, Amsterdam, 2000.