Published January 18, 2024
| Version v1
Dataset
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Example Files for pRESTO Vander Heiden et al, 2017
Authors/Creators
Description
This example uses publicly available data from:
Dysregulation of B Cell Repertoire Formation in Myasthenia Gravis Patients Revealed through Deep Sequencing
Vander Heiden JA, et al.
J Immunol. 2017 198(4):1460-1473. doi:10.4049/jimmunol.1601415.
which may be downloaded from the NCBI Sequence Read Archive under BioProject accession ID: PRJNA248475. For this example, we will use the first 25,000 sequences of sample HD09_N_AB8KB (accession: SRR4026043), which may downloaded using fastq-dump from the SRA Toolkit:
fastq-dump --split-files -X 25000 SRR4026043
Primer sequences are available online from the protocols/AbSeq directory in the Immcantation repository.
Files
Files
(8.5 MB)
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md5:66b4dcb63f177b7e7770db0f7d8c7af9
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403 Bytes | Download |
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md5:69741149fb6597b35f7d86d263db8702
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md5:c639cbcfbd2c7885322f32b4c6250f26
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md5:083db8b98090fbb88e9f390538245e8d
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md5:6ca42e541e386bcae74bb61116d7206b
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md5:c98e82b42354b21fdaa1e5d5e2eb7ef9
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md5:3495c75e9dbd170515b568f491dba625
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md5:96a1996c5578c418aee01a0b4419731d
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md5:51b19f190c0685888508a3fd30b1b44d
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md5:dd7a652215897342d39aac7af986f6d4
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