Published January 13, 2024 | Version 1.0.0

Prefrontal Manifold Geometry Contributes to Reaction Time Variability

  • 1. National University of Singapore, N.1 Institute
  • 2. National University of Singapore, Department of Psychology

Description

Spike counts from cells recorded from the Frontal Eye Fields (FEF) and dorso-lateral prefrontal cortex (DLPFC) of 2 non-human primates preforming a delayed memory saccade task. Each file contains spike counts for all cells aligned to either target onset, go-cue onset or movement (saccade) onset. The suffix 'raw' indicates whether the file contains raw spike counts, or spike counts normalized to the pre-fixation baseline. 

The data are stored in an HD5-based format for objects created with the Julia progamming language. The following code snippet shows how to load the data

 

```julia

using JLD2

ppsth,labels, trialidx, rtimes = JLD2.load("ppsth_fef_mov.jld2","ppsth", "labels","trialidx","rtimes")

```

Here, the variable `ppsth` contains the spike counts in `ppsth.counts`, the bins in `ppsth.bins`. The variable `labels` contains the label of the target shown for each trial and for each cell. Note that, `length(labels)==size(ppsth.counts,3)` is the number of cells and `length(labels[1])` is the number of correct trails for cell `. The variable `rtimes` contains the reaction time for each session used. The session name for each cell can be found by examining the variable `ppsth.cellnames`, where the name of each cell has the format "Animal/date/session/array/channel/cellid/", e.g. "J/20140904/session01/array01/channel001/cell01" denotes the first cell on the first channel of the first array recorded in the first session on 4th September 2014 from animal J.

In addition to spike counts, this dataset also contains processed data for producing the main figures in an upcoming manuscript. To reproduce the figures, first go to the paper's repository and follow the installation instructions. Then, download the data files to a 'data' sub-folder, and run the codes as instructed in the repository's README file.

Files

Files (891.4 MB)

Name Size
md5:62f18359e552b98b61fd471a9534e64d
2.4 MB Download
md5:5315e4504de18c659cc7464679c67f11
68.1 MB Download
md5:e9d6a52d892e17ed1549697d824e3ea4
68.1 MB Download
md5:0786910c79b72b1ad61c9f37f7eba03a
277.4 kB Download
md5:13ec7e673ab9affa305feeabcc299b06
444.8 kB Download
md5:a7be0cc50e936aedbcf3c915bb28b5d5
19.4 MB Download
md5:9aa671062ea272afa7a97e3510e41e2c
1.2 MB Download
md5:5ef09f190772937188df8b709caa8e64
58.3 MB Download
md5:888baf4e810877ee701d98aa34219d95
58.3 MB Download
md5:1bd15c61fede2f28dbcc96925ddce9a8
71.7 MB Download
md5:88a98bc6f9f86859666db9ce6b88f782
71.7 MB Download
md5:7b130b113403f8f00e474ebf9b920341
71.7 MB Download
md5:e1c3cf5fcdbfca52f4507edeaf59b7d9
61.5 MB Download
md5:0b08f7c4188e3345a44b124ea2adc5b3
338.2 MB Download

Additional details

Dates

Available
2024-01-14