Dataset Open Access

Cross-correlations and symmetries in genetic sequences

Altmann, Eduardo G.; Cristadoro, Giampaolo; Degli Esposti, Mirko

Data sets and supporting material used in the manuscript

"The common origin of symmetry and structure in genetic sequences" by
G. Cristadoro , M. Degli Esposti , E. G. Altmann
https://arxiv.org/abs/1710.02348

Output of calculations can be seen in the file:
Notebook.html

In order to repeat calculations or explore different choices:

  1. Download all files to the same directory
  2. Uncompress the "data.tar.gz" file (e.g., using tar -xzvf data.tar.gz)
  3. Open the Notebook using Python 3.0 in Jupyter (www.jupyter.org)

 

Files (19.7 MB)
Name Size
crossCorrelations.py
md5:dc87a068e40452de157d7055846da041 		10.3 kB Download
data.tar.gz
md5:5d8f6194af9949e02a6b3816274983e6 		1.1 MB Download
Notebook.html
md5:0a20943ae2e2edcda28fc7856cae15f7 		18.6 MB Download
Notebook.ipynb
md5:0081a6fc358fd556ef72124364a2175c 		3.0 kB Download

  • The common origin of symmetry and structure in genetic sequences, Giampaolo Cristadoro, Mirko Degli Esposti, Eduardo G. Altmann, arXiv:1710.02348 https://arxiv.org/abs/1710.02348

  • The common origin of symmetry and structure in genetic sequences Giampaolo Cristadoro, Mirko Degli Esposti, Eduardo G. Altmann bioRxiv 199323 https://doi.org/10.1101/199323

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Publication date:
October 3, 2017
DOI:
10.5281/zenodo.1001805

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