Reference-assembled Early Juan and Super August genomes and annotation
- 1. Facultad de Agronomía y Sistemas Naturales, Pontificia Universidad Católica de Chile, Chile
- 2. Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Chile
- 3. Escuela de Agronomía, Facultad de Ciencias Agronómicas y de Los Alimentos, Pontificia Universidad Católica de Valparaíso, Chile
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4.
Pontificia Universidad Católica de Chile
- 5. Universidad de Navarra Facultad de Ciencias
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6.
University of Talca
- 7. Pontificia Univeridad Católica de Chile
Description
Twe generated for the two Prunus persica cultivars, ‘Early Juan’ and ‘Super August’, using genomic DNA extracted from mesocarp tissue. Raw sequencing reads from non-bisulfite-treated DNA libraries were quality-filtered and adapter-trimmed using Trim Galore v0.6.11 (https://www.trimgalore.com) with the parameters -q 30, --length 50, and --max_n
0. Filtered reads were aligned to the P. persica reference genome v2.0 (NC_014697.1) . The resulting alignments were independently used to reconstruct and annotate the cultivar-specific reference genomes using RGAAT v2.0. Genome assemblies and annotations will be deposited in a public repository upon publication.
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