nipy/nipype: 1.8.6

Esteban, Oscar; Markiewicz, Christopher J.; Burns, Christopher; Goncalves, Mathias; Jarecka, Dorota; Ziegler, Erik; Berleant, Shoshana; Ellis, David Gage; Pinsard, Basile; Madison, Cindee; Waskom, Michael; Notter, Michael Philipp; Clark, Daniel; Manhães-Savio, Alexandre; Clark, Dav; Jordan, Kesshi; Dayan, Michael; Halchenko, Yaroslav O.; Loney, Fred; Norgaard, Martin; Salo, Taylor; Johnson, Hans; Dewey, Blake E; Bougacha, Salma; Keshavan, Anisha; Yvernault, Benjamin; Christian, Horea; Hamalainen, Carlo; Ćirić, Rastko; Dubois, Mathieu; Joseph, Michael; Cipollini, Ben; Tilley II, Steven; Visconti di Oleggio Castello, Matteo; De La Vega, Alejandro; Wong, Jason; Kaczmarzyk, Jakub; Huntenburg, Julia M.; Clark, Michael G.; Kent, James D.; Benderoff, Erin; Erickson, Drew; Dias, Maria de Fatima; Moloney, Brendan; Hanke, Michael; Giavasis, Steven; Nichols, B. Nolan; Tungaraza, Rosalia; Dell'Orco, Andrea; Frohlich, Caroline; Wassermann, Demian; de Hollander, Gilles; Koudoro, Serge; Eshaghi, Arman; Millman, Jarrod; Mancini, Matteo; Close, Thomas; Nielson, Dylan M.; Varoquaux, Gael; Waller, Lea; Watanabe, Aimi; Mordom, David; Guillon, Jérémy; Robert-Fitzgerald, Timothy; Chetverikov, Andrey; Rokem, Ariel; Acland, Benjamin; Bernardoni, Fabio; Forbes, Jessica; Markello, Ross; Gillman, Ashley; Ben-Zvi, Gal; Kong, Xiang-Zhen; Geisler, Daniel; Salvatore, John; Gramfort, Alexandre; Doll, Anna; Buchanan, Colin; DuPre, Elizabeth; Liu, Siqi; Schaefer, Alexander; Papadopoulos Orfanos, Dimitri; Kleesiek, Jens; Sikka, Sharad; Schwartz, Yannick; Ghayoor, Ali; Lee, John A.; Mattfeld, Aaron; Richie-Halford, Adam; Liem, Franz; Vaillant, Ghislain; Perez-Guevara, Martin Felipe; Heinsfeld, Anibal Sólon; Haselgrove, Christian; Durnez, Joke; Lampe, Leonie; Poldrack, Russell; Glatard, Tristan; Baratz, Zvi; Tabas, Alejandro; Cumba, Chad; Pérez-García, Fernando; Blair, Ross; Iqbal, Shariq; Welch, David; Contier, Oliver; Triplett, William; Craddock, R. Cameron; Correa, Carlos; Stadler, Jörg; Warner, Joshua; Sisk, Lucinda M.; Falkiewicz, Marcel; Sharp, Paul; Rothmei, Simon; Kim, Sin; Weinstein, Alejandro; Kahn, Ari E.; Kastman, Erik; Bottenhorn, Katherine; Grignard, Martin; Perkins, L. Nathan; Zhou, Dale; Bielievtsov, Dmytro; Cooper, Gavin; Stojic, Hrvoje; Hui Qian, Tan; Linkersdörfer, Janosch; Renfro, Mandy; Hinds, Oliver; Stanley, Olivia; Küttner, René; Pauli, Wolfgang M.; Xie, Xihe; Glen, Daniel; Kimbler, Adam; Meyers, Benjamin; Tarbert, Claire; Ginsburg, Daniel; Haehn, Daniel; Margulies, Daniel S.; Condamine, Eric; Ma, Feilong; Malone, Ian B.; Snoek, Lukas; Brett, Matthew; Cieslak, Matthew; Hallquist, Michael; Molina-Romero, Miguel; Bilgel, Murat; Lee, Nat; Kuntke, Paul; Jalan, Raunak; Inati, Souheil; Gerhard, Stephan; Mathotaarachchi, Sulantha; Saase, Victor; Van, Andrew; Steele, Christopher John; Ort, Eduard; Lerma-Usabiaga, Garikoitz; Schwabacher, Isaac; Arias, Jaime; Lai, Jeff; Pellman, John; Huguet, Jordi; Junhao WEN; Leinweber, Katrin; Chawla, Kshitij; Weninger, Leon; Modat, Marc; Mukhometzianov, Rinat; Harms, Robbert; Andberg, Sami Kristian; Matsubara, K; González Orozco, Abel A.; Routier, Alexandre; Marina, Ana; Davison, Andrew; Floren, Andrew; Park, Anne; Frederick, Blaise; Cheung, Brian; McDermottroe, Conor; McNamee, Daniel; Shachnev, Dmitry; Vogel, Dorian; Flandin, Guillaume; Jones, Henry; Gonzalez, Ivan; Varada, Jan; Schlamp, Kai; Podranski, Kornelius; Huang, Lijie; Noel, Maxime; Pannetier, Nicolas; Numssen, Ole; Khanuja, Ranjeet; Urchs, Sebastian; Shim, Sunjae; Nickson, Thomas; Huang, Lijie; Broderick, William; Tambini, Arielle; Mihai, Paul Glad; Gorgolewski, Krzysztof J.; Ghosh, Satrajit

doi:10.5281/zenodo.15054147

Published March 20, 2025 | Version 1.8.6

Software Open

nipy/nipype: 1.8.6

1. Department of Psychology, Stanford University
2. Stanford University
3. MIT
4. Independent
5. The University of Iowa
6. The Laboratory for Investigative Neurophysiology (The LINE), Department of Radiology and Department of Clinical Neurosciences, Lausanne, Switzerland; Center for Biomedical Imaging (CIBM), Lausanne, Switzerland
7. Developer
8. Klinikum rechts der Isar, TUM. ACPySS
9. UC Berkeley
10. University of California, San Francisco
11. Mayo Clinic, Neurology, Rochester, MN, USA
12. Dartmouth College: Hanover, NH, United States
13. Florida International University
14. University of Iowa
15. Department of Electrical and Computer Engineering, Johns Hopkins University
16. Molecular Imaging Research Center, CEA, France
17. UC Berkeley - UCSF Graduate Program in Bioengineering
18. Institute for Biomedical Engineering, ETH and University of Zurich
19. The Centre for Addiction and Mental Health
20. UC San Diego
21. Holland Bloorview Kids Rehabilitation Hospital
22. Dartmouth College
23. University of Texas at Austin
24. Shattuck Lab, UCLA Brain Mapping Center
25. Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
26. National Institutes of Health
27. Neuroscience Program, University of Iowa
28. Concordia University
29. CIBIT, UC
30. Otto-von-Guericke-University Magdeburg, Germany
31. Child Mind Institute
32. SRI International
33. Charitè Universitätsmedizin Berlin, Germany
34. Athena EPI, Inria Sophia-Antipolis
35. Vrije Universiteit, Amsterdam
36. Indiana University, IN, USA
37. University College London
38. University of Sydney
39. National Institute of Mental Health
40. INRIA
41. Charite Universitatsmedizin Berlin, Germany
42. ARAMIS LAB, Brain and Spine Institute (ICM), Paris, France.
43. Penn Statistics in Imaging and Visualization Endeavor, University of Pennsylvania
44. Donders Institute for Brain, Cognition and Behavior, Center for Cognitive Neuroimaging
45. The University of Washington eScience Institute
46. Washington University in St Louis
47. Division of Psychological and Social Medicine and Developmental Neuroscience, Faculty of Medicine, Technische Universität Dresden, Dresden, Germany
48. Montreal Neurological Institute and Hospital
49. Australian eHealth Research Centre, Commonwealth Scientific and Industrial Research Organisation; University of Queensland
50. Sagol School of Neuroscience, Tel Aviv University
51. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China; Max Planck Institute for Psycholinguistics, Nijmegen, the Netherlands
52. CNRS LTCI, Telecom ParisTech, Université Paris-Saclay
53. Department of Psychology, University of Bielefeld, Bielefeld, Germany.
54. The University of Sydney
55. National University Singapore
56. CEA
57. UniversityHospital Heidelberg, Germany
58. Nathan s Kline institute for psychiatric research
59. NIMH IRP
60. University of Washington
61. University of Zurich
62. ARAMIS Lab, Paris Brain Institute
63. Neurospin/Unicog/Inserm/CEA
64. Department of Psychology, Stanford University; Parietal, INRIA
65. MPI CBS Leipzig, Germany
66. 1 McGill Centre for Integrative Neuroscience (MCIN), Ludmer Centre for Neuroinformatics and Mental Health, Montreal Neurological Institute (MNI), McGill University, Montréal, 3801 University Street, WB-208, H3A 2B4, Québec, Canada. 2 University of Lyon, CNRS, INSERM, CREATIS., Villeurbanne, 7, avenue Jean Capelle, 69621, France.
67. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
68. Duke University
69. Max Planck Institute for Human Cognitive and Brain Sciences
70. Leibniz Institute for Neurobiology
71. Mayo Clinic
72. Yale University; New Haven, CT, United States
73. University of Illinois Urbana Champaign
74. Korea Advanced Institute of Science and Technology
75. University of Pennsylvania
76. Harvard University - Psychology
77. GIGA Institute
78. Boston University
79. University of Newcastle, Australia
80. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
81. German Institute for International Educational Research
82. Dept of Medical Biophysics, Univeristy of Western Ontario
83. California Institute of Technology
84. Weill Cornell Medicine
85. NIMH, Scientific and Statistical Computing Core
86. University of Pittsburgh
87. Max Planck Research Group for Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
88. CNRS, UMS3552 IRMaGe
89. University of Amsterdam
90. Department of Neuropsychiatry, University of Pennsylvania
91. Technical University Munich
92. National Institute on Aging, Baltimore, MD, USA
93. Insitiute and Polyclinc for Diagnostic and Interventional Neuroradiology, University Hospital Carl Gustav Carus, Dresden, Germany
94. Institute of Neuroinformatics, ETH/University of Zurich
95. Enigma Biomedical Group
96. MPI-CBS; McGill University
97. Vrije Universiteit Amsterdam
98. Child Mind Institute / Nathan Kline Institute
99. BarcelonaBeta Brain Research Center
100. TIB – Leibniz Information Centre for Science and Technology and University Library, Hannover, Germany
101. INRIA-Saclay, Team Parietal
102. Institute of Imaging & Computer Vision, RWTH Aachen University, Germany
103. University of Waterloo
104. University of Helsinki
105. Universidad de Guadalajara
106. ARAMIS Lab
107. The University of Texas at Austin
108. Consolidated Department of Psychiatry, Harvard Medical School
109. University of Cambridge
110. University of Applied Sciences and Arts Northwestern Switzerland
111. Stanford University and the University of Chicago
112. Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Charlestown, MA, USA
113. State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
114. Medical Imaging & Biomarkers, Bioclinica, Newark, CA, USA.
115. MIT, HMS

Release Notes

Bug-fix release in the 1.8.x series.

What's Changed

FIX: Update dcmstack interface for Py3 / newer pydicom (https://github.com/nipy/nipype/pull/3541)
FIX: NiBabel 5, and NetworkX 3 and DIPY 1.6 compatibility (https://github.com/nipy/nipype/pull/3538)
FIX: Check for non-mandatory output in DWIBiasCorrect (https://github.com/nipy/nipype/pull/3523)
FIX: Removed leftover debug print statement in FEAT class (https://github.com/nipy/nipype/pull/3521)
DOC: Fix a few more typos (https://github.com/nipy/nipype/pull/3516)
DOC: Fix typos found by codespell (https://github.com/nipy/nipype/pull/3512)
CI: Drop nipy tests until a fixed nipy is released (https://github.com/nipy/nipype/pull/3559)
CI: Disable nipy tests generally, re-add with max numpy (https://github.com/nipy/nipype/pull/3532)
CI: GitHub Workflows security hardening (https://github.com/nipy/nipype/pull/3519)
CI: Allow tutorial test cancellation (https://github.com/nipy/nipype/pull/3514)

New Contributors

@somso2e made their first contribution in https://github.com/nipy/nipype/pull/3521
@MatthieuJoulot made their first contribution in https://github.com/nipy/nipype/pull/3523
@sashashura made their first contribution in https://github.com/nipy/nipype/pull/3519

Full Changelog: https://github.com/nipy/nipype/compare/1.8.5...1.8.6

Files

nipy/nipype-1.8.6.zip

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Additional details

Is supplement to: Software: https://github.com/nipy/nipype/tree/1.8.6 (URL)

Repository URL: https://github.com/nipy/nipype

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Views	32,437	382
Downloads	3,699	47
Data volume	15.4 GB	176.9 MB

nipy/nipype: 1.8.6

Authors/Creators

Description

Release Notes

What's Changed

New Contributors

Files

nipy/nipype-1.8.6.zip

Files (3.8 MB)

Additional details

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