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Published December 31, 2014 | Version v1
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Sequencing and analysis of the complete mitochondrial genome of the giant dobsonfly Acanthacorydalis orientalis (McLachlan) (Insecta: Megaloptera: Corydalidae)

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Wang, Yi-Ran, Wang, Yu-Yu, Chang, Wen-Cheng, Liu, Xing-Yue, Yang, Ding (2014): Sequencing and analysis of the complete mitochondrial genome of the giant dobsonfly Acanthacorydalis orientalis (McLachlan) (Insecta: Megaloptera: Corydalidae). Zoological Systematics 39 (2): 209-223, DOI: 10.11865/zs20140202

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urn:lsid:zoobank.org:pub:52D32326-2E14-484F-B4CC-908E99FD4C95
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urn:lsid:plazi.org:pub:FFC7FFC9C54FE02BB8041E31C145FFC8

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Publication: 10.3109/19401736.2013.803542 (DOI)
Has part
Figure: 10.5281/zenodo.7176562 (DOI)
Figure: 10.5281/zenodo.7176564 (DOI)
Figure: 10.5281/zenodo.7176566 (DOI)
Figure: 10.5281/zenodo.7176568 (DOI)
Figure: 10.5281/zenodo.7176570 (DOI)

References

  • Boore, J. L. 2006. The complete sequence of the mitochondrial genome of Nautilus macromphalus (Mollusca: Cephalopoda). BMC Genomics, 7:182.
  • Boore, J. L. and Brown, W. M. 2000, Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that Pogonophora is not a phylum and Annelida and Arthropoda are not sister taxa. Molecular Biology and Evolution, 17(1): 87-106.
  • Buckley, T., Simon, C., Flook, P. and Misof, B. 2000. Secondary structure and conserved motifs of the frequently sequenced domains IV and V of the insect mitochondrial large subunit rRNA gene. Insect Molecular Biology, 9: 565-580.
  • Cameron, S. L. and Whiting, M. F. 2008. The complete mitochondrial genome of the tobacco hornworm, Manduca sexta (Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths. Gene, 408: 112-123.
  • Cameron, S. L., Sullivan, J., Song, H, Miller, K. B. and Whiting, M. F. 2009. A mitochondrial genome phylogeny of the Neuropterida (lace-wings, alderflies and snakeflies) and their relationship to the other holometabolous insect orders. Zoologica Scripta, 38: 575-590.
  • Cannone, J. J., Subramanian, S., Schnare, M. N., Collett, J. R., D'Souza, L. M., Du, Y, Feng, B, Lin, N, Madabusi, L. V., Muller, K. M., Pande, N., Shang, Z, Yu, N and Gutell, R. R. 2002. The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics, 3: 15.
  • Cao, C-Q and Liu, X-Y 2013. Description of the final-instar larva and pupa of Acanthacorydalis orientalis (McLachlan, 1899) (Megaloptera: Corydalidae) with some life history notes. Zootaxa, 3691: 145-152.
  • Clary, D. O. and Wolstenholme, D. R. 1985. The mitochondrial DNA molecular of Drosophila yakuba: nucleotide sequence, gene organization and genetic code. Journal of Molecular Evolution, 22: 252-271.
  • Clayton, D. A. 1982. Replication of animal mitochondrial DNA. Cell, 28: 693-705.
  • Clayton, D. A. 1991. Replication and transcription of vertebrate mitochondrial DNA. Annual Review of Cell Biology, 7:453-478.
  • Contreras-Ramos, A. 2004. Is the family Corydalidae (Neuropterida, Megaloptera) a monophylum. Denisia, 13: 135-140.
  • Contreras-Ramos, A. 2011. Phylogenetic review of dobsonflies of the subfamily Corydalinae and the genus Corydalus Latreille (Megaloptera: Corydalidae). Zootaxa, 2862: 1-38.
  • Cook, C. E. 2005. The complete mitochondrial genome of the stomatopod crustacean Squilla mantis. BMC Genomics, 6:105.
  • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
  • Gillespie, J., Johnston, J., Cannone, J. and Gutell, R. 2006. Characteristics of the nuclear (18S, 5.8 S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of Apis mellifera (Insecta: Hymenoptera): structure, organization, and retrotransposable elements. Insect Molecular Biology, 15: 657-686.
  • Guindon, S. and Gascuel, O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology, 52: 696-704.
  • Guindon, S., Lethiec, F., Duroux, P. and Gascuel, O. 2005. PHYML Online-a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Research, 33: W557-W559.
  • Hassanin, A., Leger, N. and Deutsch, J. 2005. Evidence for multiple reversals of asymmetric mutational constraints during the evolution of the mitochondrial genome of Metazoa, and consequences for phylogenetic inferences. Systematic Biology, 54: 277-298.
  • Hassanin, A. 2006. Phylogeny of Arthropoda inferred from mitochondrial sequences: strategies for limiting the misleading effects of multiple changes in pattern and rates of substitution. Molecular Phylogenetics and Evolution, 38: 100-116.
  • Hua, J-M, Li, M, Dong, P, Xie, Q and Bu, W-J 2009. The mitochondrial genome of Protohermes concolorus Yang et Yang, 1988 (Insecta: Megaloptera: Corydalidae). Molecular Biology Reports, 36: 1757-1765.
  • Li, Q, Wei, S-J, Shi, M and Chen, X-X 2013. Complete mitochondrial genome of Neochauliodes bowringi (MacLachlan)(Megaloptera: Corydalidae). Mitochondrial DNA: DOI: 10.3109/19401736.2013.803542.
  • Liu, X-Y, Yang, D, Ge, S-Q and Yang, X-K 2005. Phylogenetic review of the Chinese species of Acanthacorydalis (Megaloptera, Corydalidae). Zoologica Scripta, 34: 373-387.
  • Lowe, T. M. and Eddy, S. R. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Research, 25: 955-964.
  • Nass, M. M. K. and Nass, S. 1963. Intramitochondrial fibers with DNA characteristics. Journal of Cell Biology, 19 (3): 593-611.
  • Negrisolo, E., Babbucci, M. and Patarnello, T. 2011. The mitochondrial genome of the ascalaphid owlfly Libelloides macaronius and comparative evolutionary mitochondriomics of neuropterid insects. BMC Genomics, 12: 221.
  • Ojala, D., Montoya, J. and Attardi, G. 1981. tRNA punctuation model of RNA processing in human mitochondria. Nature, 290: 470-474.
  • Posada, D. and Crandall, K. A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14: 817-818.
  • Ronquist, F. and Huelsenbeck, J. P. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19: 1572-1574.
  • Shao, R, Campbell, N. J., Schmidt, E. R. and Barker, S. C. 2001. Increased rate of gene rearrangement in the mitochondrial genomes of three orders of hemipteroid insects. Molecular Biology and Evolution, 18(9): 1828-1832.
  • Simon, C., Buckley, T. R., Frati, F., Stewart, J. B. and Beckenbach, A. T. 2006. Incorporating molecular evolution into phylogenetic