Published September 11, 2013
| Version v1
Software documentation
Open
Cyrface - Bridging Cytoscape with R
Creators
- Emanuel Gonçalves The European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom
- Julio Saez-Rodriguez The European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom
Description
Cyrface establishes an interface between R and Cytoscape by using different Java-R libraries, e.g. Rserve, RCaller. Cyrface can be used as a Cytoscape plug-in, e.g. to run R commands within Cytoscape, or used as a library to allow your plug-in to connect to R.
Notes
Please be aware that this code is not being actively developed, as it is an archive of the code as it was at the time of publication in the associated F1000Research article. For the latest version of this code, please see https://sourceforge.net/projects/cyrface/.
Files
cyrface_v1.0.zip
Files
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Additional details
Related works
- Is cited by
- 10.12688/f1000research.2-192.v1 (DOI)