Info: Zenodo’s user support line is staffed on regular business days between Dec 23 and Jan 5. Response times may be slightly longer than normal.

Biodiversity Literature Repository
Published January 1, 2017 | Version v1
Journal article Restricted

Bacillus maritimus sp. nov., a novel member of the genus Bacillus isolated from marine sediment

Creators

Description

Pal, Deepika, Mathan Kumar, Rajendran, Kaur, Navjot, Kumar, Narender, Kaur, Gurwinder, Singh, Nitin Kumar, Krishnamurthi, Srinivasan, Mayilraj, Shanmugam (2017): Bacillus maritimus sp. nov., a novel member of the genus Bacillus isolated from marine sediment. International Journal of Systematic and Evolutionary Microbiology 67 (1): 60-66, DOI: 10.1099/ijsem.0.001569, URL: http://dx.doi.org/10.1099/ijsem.0.001569

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:BB018848FB29743C9732FFCB2D2DD04A
URL
http://publication.plazi.org/id/BB018848FB29743C9732FFCB2D2DD04A

Has part
Taxonomic treatment: 10.5281/zenodo.6309498 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/4738F030FB2D7439974BF8DE2C64D2E3 (URL)
Dataset: http://table.plazi.org/id/9BEE11AEFB2B743E974BFF7D2E81D1E3 (URL)
Dataset: http://table.plazi.org/id/9BEE11AEFB2A743F974BFC9A2CD3D445 (URL)
Figure: 10.5281/zenodo.6048398 (DOI)
Is source of
Dataset: http://www.gbif.org/dataset/9e79bc61-c5a7-47ed-8d4d-f4146d3aa545 (URL)

References

  • 1. Zhang J, Wang J, Fang C, Song F, Xin Y et al. Bacillus oceanisediminis sp. nov., isolated from marine sediment. Int J Syst Evol Microbiol 2010;60:2924-2929.
  • 2. Ash C, Farrow JAE, Wallbanks S, Collins MD. Phylogenetic heterogeneity of the genus Bacillus revealed by comparative analysis of small-subunit-ribosomal RNA sequences. Lett Appl Microbiol 1991;13:202-206.
  • 3. Ash C, Priest FG, Collins MD. Molecular identification of rRNA group 3 bacilli (Ash, Farrow, Wallbanks and Collins) using a PCR probe test. Proposal for the creation of a new genus Paenibacillus. Antonie Van Leeuwenhoek 1993;64:253-260.
  • 4. Shida O, Takagi H, Kadowaki K, Komagata K. Proposal for two new genera, Brevibacillus gen. nov. and Aneurinibacillus gen. nov. Int J Syst Bacteriol 1996;46:939-946.
  • 5. Heyndrickx M, Lebbe L, Kersters K, de Vos P, Forsyth G et al. Virgibacillus: a new genus to accommodate bacillus pantothenticus (Proom and Knight 1950). Emended description of Virgibacillus pantothenticus. Int J Syst Bacteriol 1998;48:99-106.
  • 6. WainO M, Tindall BJ, Schumann P, Ingvorsen K. Gracilibacillus gen. nov., with description of Gracilibacillus halotolerans gen. nov., sp. nov.; transfer of Bacillus dipsosauri to Gracilibacillus dipsosauri comb. nov., and Bacillus salexigens to the genus Salibacillus gen. nov., as Salibacillus salexigens comb. nov. Int J Syst Bacteriol 1999; 49 Pt 2:821-831.
  • 7. Nazina TN, Tourova TP, Poltaraus AB, Novikova EV, Grigoryan AA et al. Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. thermocatenulatus, G. thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G. thermodenitrificans. Int J Syst Evol Microbiol 2001;51:433-446.
  • 8. Yoon JH, Lee KC, Weiss N, Kho YH, Kang KH et al. Sporosarcina aquimarina sp. nov., a bacterium isolated from seawater in Korea, and transfer of Bacillus globisporus (Larkin and Stokes 1967), Bacillus psychrophilus (Nakamura 1984) and Bacillus pasteurii (Chester 1898) to the genus Sporosarcina as Sporosarcina globispora comb. nov., Sporosarcina psychrophila comb. nov. and Sporosarcina pasteurii comb. nov., and emended description of th. Int J Syst Evol Microbiol 2001;51:1079-1086.
  • 9. Albert RA, Archambault J, Lempa M, Hurst B, Richardson C et al. Proposal of Viridibacillus gen. nov. and reclassification of Bacillus arvi, Bacillus arenosi and Bacillus neidei as Viridibacillus arvi gen. nov., comb. nov., Viridibacillus arenosi comb. nov. and Viridibacillus neidei comb. nov. Int J Syst Evol Microbiol 2007;57:2729-2737.
  • 10. Ahmed I, Yokota A, Yamazoe A, Fujiwara T. Proposal of Lysinibacillus boronitolerans gen. nov. sp. nov., and transfer of Bacillus fusiformis to Lysinibacillus fusiformis comb. nov. and Bacillus sphaericus to Lysinibacillus sphaericus comb. nov. Int J Syst Evol Microbiol 2007;57:1117-1125.
  • 11. Yoon JH, Kang SJ, Oh TK. Reclassification of Marinococcus albus Hao et al. 1985 as Salimicrobium album gen. nov., comb. nov. and Bacillus halophilus Ventosa et al. 1990 as Salimicrobium halophilum comb. nov., and description of Salimicrobium luteum sp. nov. Int J Syst Evol Microbiol 2007;57:2406-2411.
  • 12. Vaishampayan P, Miyashita M, Ohnishi A, Satomi M, Rooney A et al. Description of Rummeliibacillus stabekisii gen. nov., sp. nov. and reclassification of Bacillus pycnus Nakamura et al. 2002 as Rummeliibacillus pycnus comb. nov. Int J Syst Evol Microbiol 2009; 59:1094-1099.
  • 13. Krishnamurthi S, Chakrabarti T, Stackebrandt E. Re-examination of the taxonomic position of Bacillus silvestris Rheims et al. 1999 and proposal to transfer it to Solibacillus gen. nov. as Solibacillus silvestris comb. nov. Int J Syst Evol Microbiol 2009;59:1054-1058.
  • 14. Zhou Y, Xu J, Xu L, Tindall BJ. Falsibacillus pallidus to replace the homonym Bacillus pallidus Zhou et al. 2008. Int J Syst Evol Microbiol 2009;59:3176-3180.
  • 15. Krishnamurthi S, Ruckmani A, Pukall R, Chakrabarti T. Psychrobacillus gen. nov. and proposal for reclassification of Bacillus insolitus Larkin & Stokes, 1967, B. psychrotolerans Abd-El Rahman et al., 2002 and B. psychrodurans Abd-El Rahman et al., 2002 as Psychrobacillus insolitus comb. nov., Psychrobacillus psychrotolerans comb. nov. and Psychrobacillus psychrodurans comb. nov. Syst Appl Microbiol 2010;33:367-373.
  • 16. Zavarzina DG, Tourova TP, Kolganova T. V, Boulygina ES, Zhilina TN. Description of Anaerobacillus alkalilacustre gen. nov., sp. nov. strictly anaerobic diazotrophic bacillus isolated from soda lake and transfer of Bacillus arseniciselenatis, Bacillus macyae, and Bacillus alkalidiazotrophicus to Anaerobacillus as the new combinations A. arseniciselenatis comb. nov., A. macyae comb. nov., and A. alkalidiazotrophicus comb. nov. Microbiol 2009;78:723-731.
  • 17. Coorevits A, Dinsdale AE, Halket G, Lebbe L, de Vos P et al. Taxonomic revision of the genus Geobacillus: emendation of Geobacillus, G. stearothermophilus, G. jurassicus, G. toebii, G. thermodenitrificans and G. thermoglucosidans (nom. corrig., formerly 'thermoglucosidasius'); transfer of Bacillus thermantarcticus to the genus as G. thermantarcticus comb. nov.; proposal of Caldibacillus debilis gen. nov., comb. nov.; transfer of G. tepidamans to Anoxybacillus as A. tepidamans comb. nov.; and proposal of Anoxybacillus caldiproteolyticus sp. nov. Int J Syst Evol Microbiol 2012;62: 1470-1485.
  • 18. Didari M, Amoozegar MA, Bagheri M, Schumann P, Sproer C et al. Alteribacillus bidgolensis gen. nov., sp. nov., a moderately halophilic bacterium from a hypersaline lake, and reclassification of Bacillus persepolensis as Alteribacillus persepolensis comb. nov. Int J Syst Evol Microbiol 2012;62:2691-2697.
  • 19. Kampfer P, Glaeser SP, Busse HJ. Transfer of Bacillus schlegelii to a novel genus and proposal of Hydrogenibacillus schlegelii gen. nov., comb. nov. Int J Syst Evol Microbiol 2013;63:1723-1727.
  • 20. Boeye H, Aerts M. Numerical taxonomy of Bacillus isolates from North Sea sediments. Int J Syst Bacteriol 1976;26:427-441.
  • 21. Claus D, Berkeley RCW. Genus Bacillus, Cohn 1872. In: Sneath PHA, Mair NS, Sharpe ME and Holt JG (editors). Bergey' s Manual of Systematic Bacteriology, vol. 2. Baltimore: The Williams and Wilkins Co; 1986. pp. 1105-1139.
  • 22. Ortigosa M, Garay E, Pujalte M-J. Gram-positive bacteria of marine origin: a numerical taxonomic study on Mediterranean isolates. Microbiologia SEM 1997;13:543-462.
  • 23. Nowlan B, Dodia MS, Singh SP, Patel BK. Bacillus okhensis sp. nov., a halotolerant and alkalitolerant bacterium from an Indian saltpan. Int J Syst Evol Microbiol 2006;56:1073-1077.
  • 24. Dastager SG, Mawlankar R, Mual P, Verma A, Krishnamurthi S et al. Bacillus encimensis sp. nov. isolated from marine sediment. Int J Syst Evol Microbiol 2015;65:1421-1425.
  • 25. Kumar RM, Kaur G, Kumar A, Bala M, Singh NK et al. Taxonomic description and genome sequence of Bacillus campisalis sp. nov., a member of the genus Bacillus isolated from a solar saltern. Int J Syst Evol Microbiol 2015;65:3235-3240.
  • 26. Logan NA, Berge O, Bishop AH, Busse HJ, De Vos P et al. Proposed minimal standards for describing new taxa of aerobic, endospore-forming bacteria. Int J Syst Evol Microbiol 2009;59: 2114-2121.
  • 27. Gerhardt P, Murray RGE, Costilow RN, Nester EW, Wood WA et al. (editors). Manual of Methods for General Bacteriology. Washington, DC: American Society for Microbiology; 1981.
  • 28. Smibert RM, Krieg NR. Phenotypic characterization. In: Gerhard P, Murray RGE, Wood WA and Krieg NR (editors). Methods for General and Molecular Bacteriology. Washington, DC: American Society for Microbiology; 1994. pp. 607-654.
  • 29. Xu P, Li WJ, Tang SK, Zhang YQ, Chen GZ et al. Naxibacter alkalitolerans gen. nov., sp. nov., a novel member of the family 'Oxalobacteraceae' isolated from China. Int J Syst Evol Microbiol 2005;55: 1149-1153.
  • 30. Smith NR, Gordon RE, Clark FE. Aerobic spore forming bacteria. Washington, DC: Agriculture Monograph No. 16, United States Department of Agriculture; 1952.
  • 31. Mayilraj S, Saha P, Suresh K, Saini HS. Ornithinimicrobium kibberense sp. nov., isolated from the Indian Himalayas. Int J Syst Evol Microbiol 2006;56:1657-1661.
  • 32. Kim OS, Cho YJ, Lee K, Yoon SH, Kim M et al. Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 2012;62:716-721.
  • 33. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 2013;30:2725-2729.
  • 34. Kumar A, Bajaj A, Kumar RM, Kaur G, Kaur N et al. Taxonomic description and Genome sequence of Rheinheimera mesophila sp. nov., strain IITR-13T isolated from a pesticide contaminated sandy soil. Int J Syst Evol Microbiol 2015;65:3666-3673.
  • 35. Staneck JL, Roberts GD. Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 1974;28:226-231.
  • 36. Schumann P. Peptidoglycan structure. Methods Microbiol 2011;38: 101-129.
  • 37. Collins MD, Jones D. Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. Microbiol Rev 1981;45:316-354.
  • 38. Wu C, Lu X, Qin M, Wang Y, Ruan J. Analysis of menaquinone compound in microbial cells by HPLC. Microbiology 1989;16: 176-178.
  • 39. Minnikin DE, O 'Donnell AG, Goodfellow M, Alderson G, Athalye M et al. An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 1984;2: 233-241.
  • 40. Sasser M. Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids, MIDI Technical Note 101. Newark, DE: MIDI Inc; 1990.
  • 41. Kampfer P, Kroppenstedt RM. Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 1996;42:989-1005.
  • 42. Marmur J, Doty P. Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 1962;5:109-118.
  • 43. Stackebrandt E, Goebel BM. Taxonomic note: a place for DNA- DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 1994;44: 846-849.
  • 44. Stackebrandt E, Ebers J. Taxonomic parameters revisited: tarnished gold standards. Microbiol Today 2006;33:152-155.
  • 45. Kim M, Oh HS, Park SC, Chun J. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Microbiol 2014;64:346-351.
  • 46. Didari M, Amoozegar MA, Bagheri M, Mehrshad M, Schumann P et al. Bacillus persicus sp. nov., a halophilic bacterium from a hypersaline lake. Int J Syst Evol Microbiol 2013;63:1229-1234.
  • 47. Tiago I, Pires C, Mendes V, Morais PV, Da Costa MS et al. Bacillus foraminis sp. nov., isolated from a non-saline alkaline groundwater. Int J Syst Evol Microbiol 2006;56:2571-2574.
  • 48. Mccarthy BJ, Bolton ET. An approach to the measurement of genetic relatedness among organisms. Proc Natl Acad Sci USA 1963;50:156-164.
  • 49. Sylvan JB, Hoffman CL, Momper LM, Toner BM, Amend JP et al. Bacillus rigiliprofundi sp. nov., an endospore-forming, Mn-oxidizing, moderately halophilic bacterium isolated from deep subseafloor basaltic crust. Int J Syst Evol Microbiol 2015;65:1992-1998.