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Published June 21, 2019 | Version v1
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Weak Genetic Differentiation among Populations of the Andean Ground Beetle Pelmatellus columbianus (Reiche, 1843) (Coleoptera: Carabidae)

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Muñoz-Tobar, Sofía I., Biológicas, Escuela de Ciencias (2019): Weak Genetic Differentiation among Populations of the Andean Ground Beetle Pelmatellus columbianus (Reiche, 1843) (Coleoptera: Carabidae). The Coleopterists Bulletin 73 (2): 411-427, DOI: 10.1649/0010-065X-73.2.411, URL: http://dx.doi.org/10.1649/0010-065x-73.2.411

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urn:lsid:plazi.org:pub:FFF0FFFBBD7C593F6336FFAC86659957

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Publication: 10.3389/fgene.2013.00192 (DOI)
Has part
Figure: 10.5281/zenodo.5373139 (DOI)
Figure: 10.5281/zenodo.5373141 (DOI)
Figure: 10.5281/zenodo.5373143 (DOI)
Figure: 10.5281/zenodo.5373145 (DOI)
Figure: 10.5281/zenodo.5373147 (DOI)
Figure: 10.5281/zenodo.5373149 (DOI)

References

  • Anthelme, F., D. Jacobsen, P. Macek, R. I. Meneses, P. Moret, S. Beck, and O. Dangles. 2014. Biodiversity patterns and continental insularity in the Tropical High Andes. Artic, Antarctic and Alpine Research 46(4): 811-828.
  • Bouckaert, R., J. Heled, D. Kuhnert, T. Vaughan, C. H. Wu, D. Xie, M. A. Suchard, A. Rambaut, and A. J. Drummond. 2014. BEAST 2: A software platform for Bayesian Evolutionary Analysis. PLoS Computational Biology 10(4): e1003537.
  • Bousquet, Y. 2012. Catalogue of Geadephaga (Coleoptera, Adephaga) of America, north of Mexico. ZooKeys 245: 1-1722.
  • Brumfield, R. T., and S. V. Edwards. 2007. Evolution into and out of the Andes: A Bayesian analysis of historical diversification in Thamnophilus antshrikes. Evolution 61(2): 346-367.
  • Chaves, J. A., J. P. Pollinger, T. B. Smith, and G. LeBuhn. 2007. The role of geography and ecology in shaping the phylogeography of the speckled hummingbird (Adelomyia melanogenys) in Ecuador. Molecular Phylogenetics and Evolution 43(3): 795-807.
  • Cleef, A. 1979. The phytogeographical position of the Neotropical vascular paramo flora with special reference to the Colombian Cordillera Oriental [pp. 175-184]. In: Tropical Botany (K. Larsen and L. B. Holm-Nielsen, editors). Academic Press, London, UK.
  • Clement, M., D. Posada, and K. A. Crandall. 2000. TCS: A computer program to estimate gene genealogies. Molecular Ecology 9(10): 1657-1660.
  • Cockerell, T. D. A. 1913. Some fossil insects from Florissant Colorado. The Canadian Entomologist 45(7): 229-233.
  • Cuesta, F., M. Peralvo, A. Merino-Viteri, M. Bustamante, F. Baquero, J. F. Freile, P. Muriel P., and O. Torres-Carvajal. 2017. Priority areas for biodiversity conservation in mainland Ecuador. Neotropical Biodiversity 3(1): 93-106.
  • Darriba, D., G. L. Taboada, R. Doallo, and D. Posada. 2012. Europe PMC Funders Group jModelTest 2: More models, new heuristics and high- performance computing. Nature Methods 9(8): 6-9.
  • De Brievre, B., and T. Calle. 2011. The Andean Paramo Project: Conserving biodiversity and hydrological services on the roof of the Andes. Mountain Forum Bulletin 2011: 1-6.
  • Duellman, W. E. 1979. South American Herpetofauna:Its Origin, Evolution, and Dispersal. Museum of Natural History, University of Kansas, Lawrence, KS.
  • Elias, M., M. Joron, K. Willmott, K. L. Silva-Brand~ ao, V. Kaiser, C. F. Arias, L. M. G. Pinerez ~ , S. Uribe, A. V. Z. Brower, A. V. L. Freitas, and C. D. Jiggins. 2009. Out of the Andes: Patterns of diversification in clearwing butterflies. Molecular Ecology 18(8): 1716-1729.
  • ESRI. 2016. ArcGIS Desktop. Release 10.4.1. Environmental System Institute. Redlands, CA.
  • Excoffier, L., and H. E. Lischer. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular ecology resources 10(3): 564-567.
  • Fick, S. E., and R. J. Hijmans. 2017. WorldClim 2: New 1-km spatial resolution climate surfaces for global land areas. International Journal of Climatology 37(12): 4302-4315.
  • Finn, D. S., A. C. Encalada, and H. Hampel. 2016. Genetic isolation among mountains but not between stream types in a tropical high-altitude mayfly. Freshwater Biology 61(5): 702-714.
  • Frankham, R. 1996. Relationship of genetic variation to population size in wildlife Conservation Biology 10(6): 1500-1508.
  • Franks, S. J., and A. A. Hoffmann. 2012. Genetics of climate change adaptation. Annual Review of Genetics 46: 185-208.
  • Garzione, C. N., G. D. Hoke, J. C. Libarkin., S. Withers, B. Macfadden, J. Eiler, P. Ghosh, and A. Mulch. 2008. Rise of the Andes. Science 320(5881): 1304-1307.
  • Gentry, A. H. 1988. Changes in plant community diversity and floristic composition on environmental and geographical gradients.Annals of the Missouri Botanical Garden 75(1): 1-34.
  • Goicoechea, N., J. M. Padial, J. C. Chaparro, S. Castroviejo-Fisher, and I. de la Riva. 2012. Molecular phylogenetics, species diversity, and biogeography of the Andean lizards of the genus Proctoporus (Squamata: Gymnophthalmidae). Molecular Phylogenetics and Evolution 65(3): 953-964.
  • Gomez, R. A., K. Will, and D. R. Maddison. 2016. Are Miquihuana rhadiniformis Barr, 1982 and Pseudamara arenaria (LeConte, 1847) (Coleoptera, Carabidae) sphodrines? Phylogenetic analysis of data from next-generation sequencing of museum specimens resolves the tribal-group relationships of these enigmatic taxa. Entomologische Blatter und Coleoptera 112(1): 149-168.
  • Goulet, H. 1974. Classification of the North and Middle American species of the genus Pelmatellus Bates (Coleoptera: Carabidae: Harplaini). Quaestiones Entomologicae 10: 80-102.
  • Gradstein, F. M., F. G. Ogg, A. G. Smith, W. Bleeker, and L. J. Lourens. 2004. A new geologic time scale, with special reference to Precambrian and Neogene. Episodes 27(2): 83-100.
  • Gregory-Wodzicki, K. M. 2000. Uplift history of the central and northern Andes: A review. Geological Society of America Bulletin 112(7): 1091-1105.
  • Guarnizo, C. E., A. Amezquita, and E. Bermingham. 2009. The relative roles of vicariance versus elevational gradients in the genetic differentiation of the high Andean tree frog, Dendropsophus labialis. Molecular Phylogenetics and Evolution 50(1): 84-92.
  • Guayasamin, J. M., E. Bonaccorso, W. E. Duellman, and L. A. Coloma. 2010. Genetic differentiation in the nearly extinct Atelopus, with emphasis on the A. ignescens and A. bomolochos. Zootaxa 2574(1): 55-68.
  • Heer, O. 1870. Die miocene Flora und Fauna Spitzbergens. Kungliga Svenska Vetenskapsakademiens Handlingar 8(7): 1-98.
  • Hines, H. M. 2008. Historical biogeography, divergence times, and diversification patterns of bumble bees (Hymenoptera: Apidae: Bombus). Systematic Biology 57(1): 58-75.
  • Hodkinson, I. D. 2005. Terrestrial insects along elevation gradients: Species and community responses to altitude. Biological Reviews 80(3): 489-513.
  • Hoorn, C., F. P. Wesselingh, H. ter Steege, M. A. Bermudez, A. Mora, J. Sevink, I. Sanmart´in, A. Sanchez-Meseguer, C. L. Anderson, J. P. Figueiredo, C. Jaramillo, D. Riff, F. R. Negri, H. Hooghiemstra, J. Lundberg, T. Stadler, T. Sarkinen, and A. Antonelli. 2010. Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science 330(6006): 927-931.
  • Huelsenbeck, J. P., and F. Ronquist. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17(8): 754-755.
  • Hughes, C., and R. Eastwood. 2006. Island radiation on a continental scale: Exceptional rates of plant diversification after uplift of the Andes. Proceedings of the National Academy of Sciences 103(27): 10334-10339.
  • Josse, C., P. A. Mena, and G. Medina. 2000. La Biodiversidad de los Paramos. Serie Paramo 7. GTP/ Abya Yala, Quito, Ecuador.
  • Josse, C., F. Cuesta, G. Navarro, V. Barrena, E. Cabrera, E. Chacon-Moreno, W. Ferreira, M. Peralvo, J. Saito, and A. Tovar. 2009. Ecosistemas de los Andes del Norte y Centro. Bolivia, Colombia, Ecuador, Peru y Venezuela. Secretar´ia General de la Comunidad Andina, Programa Regional ECOBONA-Intercooperation, CONDESAN- Proyecto Paramo Andino, Programa BioAndes, EcoCiencia, NatureServe, IAvH, LTA-UNALM, ICAE-ULA, CDC-UNALM, RUMBOL SRL, Lima, Peru.
  • Krabbe, N. 2008. Arid valleys as dispersal barriers to high-Andean forest birds in Ecuador. Cotinga 29: 28-30.
  • Kroschel, J., and V. Ca~ nedo. 2009. How do insecticides affect potato yield and ecosystem resilience to manage potato pests? An ecological assessment from the central highlands of Peru [pp. 9-22]. In: 15th Triennial Symposium of the International Society for Tropical Root Crops. International Potato Center, Lima, Peru.
  • Lopez-Maury, L., S. Marguerat, and J. Bahler. 2008. Tuning gene expression to changing environments: From rapid responses to evolutionary adaptation. Nature Reviews Genetics 9(8): 583-593.
  • Luteyn, J. L. 1999. Paramos: A Checklist of Plant Diversity, Geographical Distribution and Botanical Literature. Memoirs of the New York Botanical Garden. Volume 84. The New York Botanical Garden, New York, NY.
  • Maddison, D. R. 2014. An unexpected clade of South American ground beetles (Coleoptera, Carabidae, Bembidion). ZooKeys 416: 113-155.
  • Madri~ nan, S., A. J. Cortes, and J. E. Richardson. 2013. Paramo is the world 's fastest evolving and coolest biodiversity hotspot. Frontiers in Genetics 4: 192. DOI: 10.3389/fgene.2013.00192.
  • Mart´inez-Navarro, E. M., J. Galian, and J. Serrano. 2005. Phylogeny and molecular evolution of the tribe Harpalini (Coleoptera, Carabidae) inferred from mitochondrial cytochrome-oxidase I. Molecular Phylogenetics and Evolution 35(1): 127-146.
  • Moret, P. 2005. Los Coleopteros Carabidae del Paramo en los Andes del Ecuador. Monograf´ia 2. Pontificia Universidad Catolica del Ecuador, Quito, Ecuador.
  • Moret, P. 2009. Altitudinal distribution, diversity and endemicity of Carabidae (Coleoptera) in the paramos of Ecuadorian Andes. Annales de la Societe entomologique de France 45(4): 500-510.
  • Moret, P., M. de los A. Arauz, M. Gobbi, and A. Barragan. 2016. Climate warming effects in the tropical Andes: First evidence for upslope shifts of Carabidae (Coleoptera) in Ecuador. Insect Conservation and Diversity 9(4): 342-350.
  • Mu noz-Mendoza ~ , C., G. D' Elia, A. Panzera, T. M. A. Mendez, A. Villalobos-Leiva, J. W. Sites, Jr., and P. F. Victoriano. 2017. Geography and past climate changes have shaped the evolution of a widespread lizard from the Chilean hotspot. Molecular Phylogenetics and Evolution 116: 157-171.
  • Myers, N., R. A. Mittermeier, C. G. Mittermeier, G. A. da Fonseca, and J. Kent. 2000. Biodiversity hotspots for conservation priorities. Nature 403(6772): 853-858.
  • Ober, K. A., and T. N. Heider. 2010. Phylogenetic diversification patterns and divergence times in ground beetles (Coleoptera: Carabidae: Harpalinae). BMC Evolutionary Biology 10: 262.
  • Penz, C., P. Devries, J. Tufto, and R. Lande. 2015. Butterfly dispersal across Amazonia and its implication for biogeography. Ecography 38(4): 410-418.
  • Perrault, G. G. 1994. Ecobiogeography of Carabidae in the Andes of Venezuela [pp. 45-49]. In: Carabid Beetles: Ecology and Evolution, Volume 51 (K. Desender, M. Loreau, M. L. Luff, and J. P. Maelfait, editors). Springer, Dordrecht, Netherlands.
  • Petit, R. J., and L. Excoffier. 2009. Gene flow and species delimitation. Trends in Ecology and Evolution 24(7): 386-393.
  • Phillips, S. J., R. P. Anderson, and R. E. Schapire. 2006. Maximum entropy modeling of species geographic distributions. Ecological Modelling 190: 231-259.
  • Pritchard, J. K., M. Stephens, and P. Donnelly. 2000. Inference of population structure using multilocus genotype data. Genetics 155(2): 945-959.
  • Pyrcz, T. W., J. Lorenc-Brudecka, A. Zubek, P. Boyer, M. Carolaing Gabaldon, and J. Mavarez. 2017. Taxonomy, phylogeny and distribution of the genus Steromapedaliodes sensu novo in the Cordillera de Merida, Venezuela (Lepidoptera: Nymphalidae: Satyrinae: Satyrini). Arthropod Systematics and Phylogeny 75(2): 195-243.
  • Quintana, C., R. T. Pennington, C. U. Ulloa, and H. Balslev. 2017. Biogeographic barriers in the Andes: Is the Amotape-Huancabamba Zone a dispersal barrier for dry forest plants? Annals of the Missouri Botanical Garden 102(3): 542-550.
  • Reiche, L. 1843. Coleoptera Colombiana, etc., decas nona. Revue Zoologique 6: 177-180.
  • Rozas, J., J. C. Sanchez-DelBarrio, X. Messeguer, and R. Rozas. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19(18): 2496-2497.
  • Santos, J. C., L. A. Coloma, K. Summers, J. P. Caldwell, R. Ree, and D. C. Cannatella. 2009. Amazonian amphibian diversity is primarily derived from late Miocene Andean lineages. PLoS Biology 7(3): e1000056.
  • Simon, C., F. Frati, A. Beckenbach, B. Crespi, H. Liu, and P. Flook. 1994. Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Annals of the Entomological Society of America 87(6): 651-701.
  • Sklenar, P., E. Duskova, and H. Balslev. 2011. Tropical and temperate: Evolutionary history of paramo flora. Botanical Review 77(2): 71-108.
  • Smith, J. M., and J. Haigh. 1974. The hitch-hiking effect of a favourable gene. Genetics Research 23(1): 23-35.
  • Smith, B. T., J. E. McCormack, A. M. Cuervo, M. J. Hickerson, A. Aleixo, C. D. Cadena, J. Perez- Eman, C. W. Burney, X. Xie, M. G. Harvey, B. C. Faircloth, T. C. Glenn, E. P. Derryberry, J. Prejean, S. Fields, and R. T. Brumfield. 2014. The drivers of tropical speciation. Nature 15(7527): 406.
  • Stamatakis, A. 2014. RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30(9): 1312-1313.
  • Swets, J. A. 1988. Measuring the accuracy of diagnostic systems. Science 240(4857): 1285-1293.
  • Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123(3): 585-595.
  • Terborgh, J. 1977. Bird species diversity on an Andean elevational gradient. Ecology 58(5): 1007-1019.
  • Turchetto-Zolet, A. C., F. Pinheiro, F. Salgueiro, and C. Palma-Silva. 2013. Phylogeographical patterns shed light on evolutionary process in South America. Molecular Ecology 22(5): 1193-1213.
  • Veblen, T. T., K. R. Young, and A. Orme. 2007. The Physical Geography of South America. Oxford University Press, Cambridge, UK.
  • Vuilleumier, F. 1970. Insular biogeography in continental regions. I. The northern Andes of South America. The American Naturalist 104 (938): 373-388.
  • Weigend, M. 2004. Additional observations on the biogeography of the Amotape-Huancabamba zone in northern Peru: Defining the south-eastern limits. Revista Peruana de Biolog´ia 11(2): 127-134.
  • Weir, J. T. 2006. Divergent timing and patterns of species accumulation in lowland and highland Neotropical birds. Evolution 60(4): 842-855.
  • Wichard, W., W. Arens, and G. Eisenbeis. 2002. Biological Atlas of Aquatic Insects. Apollo Books, Stenstrup, Denmark.
  • Wild, A. L., and D. R. Maddison. 2008. Evaluating nuclear protein-coding genes for phylogenetic utility in beetles. Molecular Phylogenetics and Evolution 48(3): 877-891.