Biodiversity Literature Repository
Published September 9, 2016 | Version v1
Journal article Restricted

An integrative approach to reveal speciation and species richness in the genus Diasporus (Amphibia: Anura: Eleutherodactylidae) in eastern Panama

Creators

Description

Batista, Abel, Kohler, Gunther, Mebert, Konrad, Hertz, Andreas, Vesely, Milan (2016): An integrative approach to reveal speciation and species richness in the genus Diasporus (Amphibia: Anura: Eleutherodactylidae) in eastern Panama. Zoological Journal of the Linnean Society 178 (2): 267-311, DOI: 10.1111/zoj.12411, URL: http://dx.doi.org/10.1111/zoj.12411

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:7A4FFFACE865FFA23D75C41A9B34F402
URL
http://publication.plazi.org/id/7A4FFFACE865FFA23D75C41A9B34F402

Has part
Taxonomic treatment: 10.5281/zenodo.10543851 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/867687D4E862FFAE3C79C5D19A39F36E (URL)
Taxonomic treatment: 10.5281/zenodo.10543853 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/867687D4E869FFB03EECC0FE9894F68A (URL)
Taxonomic treatment: 10.5281/zenodo.10543855 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/867687D4E877FFB63ED6C6A599B0F1DD (URL)
Taxonomic treatment: 10.5281/zenodo.5460087 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/867687D4E871FFB53EC9C4CC9FE7F2B3 (URL)
Figure: 10.5281/zenodo.5367353 (DOI)
Figure: 10.5281/zenodo.5367355 (DOI)
Figure: 10.5281/zenodo.5367357 (DOI)
Figure: 10.5281/zenodo.5367359 (DOI)
Figure: 10.5281/zenodo.5367361 (DOI)
Figure: 10.5281/zenodo.5367363 (DOI)
Figure: 10.5281/zenodo.5367365 (DOI)
Figure: 10.5281/zenodo.5367367 (DOI)
Figure: 10.5281/zenodo.5367369 (DOI)
Figure: 10.5281/zenodo.5367371 (DOI)
Figure: 10.5281/zenodo.5367373 (DOI)
Figure: 10.5281/zenodo.5367375 (DOI)
Figure: 10.5281/zenodo.5367377 (DOI)
Figure: 10.5281/zenodo.5367379 (DOI)
Figure: 10.5281/zenodo.5367381 (DOI)
Figure: 10.5281/zenodo.5367385 (DOI)
Figure: 10.5281/zenodo.5367387 (DOI)

References

  • Akaike H. 1974. A new look at the statistical model identifica-
  • Batista A. 2009. Comer o Cantar? Implicaciones del tama no ~ corporal sobre la importancia de la dieta y el canto en un ensamble de especies de anuros (Amphibia: Anura: Terrarana). - Unpubl. MSc thesis.
  • Batista A, Ponce M, Hertz A. 2012. A new species of rainfrog of the genus Diasporus (Anura: Eleutherodactylidae) from Serrania de Tabasara, Panama. Zootaxa 3410: 51-60.
  • Batista A, Hertz A, Mebert K, K ohler € G, Lotzkat S, Ponce M, Vesely M. 2014a. Two new fringe-limbed frogs of the genus Ecnomiohyla (Anura: Hylidae) from Panama. Zootaxa 3826: 449-474.
  • Batista A, Hertz A, K ohler € G, Mebert K, Vesely M. 2014b. Morphological variation and phylogeography of frogs related to Pristimantis caryophyllaceus (Anura: Terrarana: Craugastoridae) in Panama. Salamandra 50: 155- 171.
  • Bickford D, Lohman D, Sodhi S, Ng PK, Meier R, Winker K, Ingram K, Das I. 2007. Cryptic species as a window on diversity and conservation. Trends in Ecology & Evolution, 22: 148-155.
  • Bosch J, De la Riva I. 2004. Are frog calls modulated by the environment? An analysis with anuran species from Bolivia Canadian Journal of Zoology 82: 880-888.
  • Boulenger GA. 1898. An account of the reptiles and batrachians collected by Mr. W. F. H. Rosenberg in Western Ecuador. Proceedings of the Zoological Society of London 1898: 107-126.
  • Bradbury JW, Vehrencamp SL. 2011. Principles of animal communication, 2nd edn. Sunderland, MA: Sinauer Associates.
  • Charif RA, Clark CW, Fristrup KM. 2004. Raven 1.3 User's Manual. Ithaca, NY: Cornell Laboratory of Ornithology.
  • Chaves G, Garcia-Rodriguez A, Mora A, Leal A. 2009. A new species of dink frog (Anura: Eleutherodactylidae: Diasporus) from Cordillera de Talamanca, Costa Rica. Zootaxa 2088: 1-14.
  • Coates AG, Obando JA. 1996. The geologic evolution of the Central American Isthmus. In: Jackson JBC, Budd AF, Coates AG, eds. Evolution and environment in tropical America. Chicago: University of Chicago Press, 21-56.
  • Coates AG, Collins LS, Aubry MP, Berggren WA. 2004. The geology of the Darien, Panama, and the late Miocene- Pliocene collision of the Panama arc with northwestern South America. Geological Society of American Bulletin 116: 1327-1344.
  • Cochran DM, Goin CJ. 1970. Frogs of Colombia. Bulletin of the United States National Museum 288: 1-655.
  • Cocroft RB, Ryan MJ. 1995. Patterns of advertisement call evolution in toads and chorus frogs. Animal Behaviour, 49: 283-303.
  • Cope ED. 1875. On the Batrachia and Reptilia of Costa Rica. Journal of the academy of Natural sciences Philadelphia series 2: 93-157.
  • Crawford AJ, Ryan MJ, Jaramillo CA. 2010a. A new species of Pristimantis (Anura: Strabomantidae) from the Pacific coast of the Darien Province, Panama, with a molecular analysis of its phylogenetic position. Herpetologica 66: 192-206.
  • Crawford AJ, Lips KR, Bermingham E. 2010b. Epidemic disease decimates amphibian abundance, species diversity, and evolutionary history in the highlands of central Panama. Proceedings of the National Academy of Sciences (USA) 107: 13777-13782.
  • Crawford AJ, Cruz C, Griffith E, Ross H, Iba nez ~ R, Lips KR, Driskell AC, Bermingham E, Crump P. 2013. DNA barcoding applied to ex situ tropical amphibian conservation programme reveals cryptic diversity in captive populations. Molecular Ecology Resources 13: 1005-1018.
  • Dayrat B. 2005. Towards integrative taxonomy. Biological Journal of the Linnean Society 85: 407-415.
  • DeSalle R. 2006. Species discovery versus species identification in DNA barcoding efforts: response to rubinoff. Conservation Biology 20: 1545-1547.
  • Drummond AJ, Rambaut A. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BioMed Central, Evolutionary Biology 7: 214.
  • Drummond AJ, Ho SYW, Phillips MJ, Rambaut A. 2006. Relaxed phylogenetics and dating with confidence. Public Library of Science Biology 4: e88.
  • Drummond AJ, Ashton B, Cheung M, Heled J, Kearse M, Moir R, Stones-Havas S, Thierer T, Wilson A. 2010. Geneious v.4.8.5. www.geneious.com (accessed 27 February 2012).
  • Duellman WE, Lehr E. 2009. Terrestrial breeding frogs (Strabomantidae) in Peru. M unster € , Germany: Nature und Tier Verlag.
  • Duellman WE, Trueb L. 1994. Biology of amphibians. Baltimore and London: The Johns Hopkins University Press, 670 pp.
  • Dunn ER. 1942. A new species of frog (Eleutherodactylus) from Costa Rica. Notulae Naturae of the Academy of Natural Sciences of Philadelphia 104: 1-2.
  • Duque-Caro H. 1990. The Choco Block in the northwestern corner of South America: structural, tectonostratigraphic, and paleogeographic implications. Journal of South American Earth Sciences 3: 71-84.
  • Environmental Systems Resource Institute (ESRI). 2009. ArcMap 10. Redlands, CA, USA: ESRI.
  • Farris DW, Jaramillo C, Bayona G, Restrepo-Moreno SA, Montes C, Cardona A, Mora A, Speakman RJ, Glascock MD, Valencia V. 2011. Fracturing of the Panamanian Isthmus during initial collision with South America. Geology 39: 1007-1010.
  • Fouquet A, Gilles A, Vences M, Marty C, Blanc M, Gemmell NJ. 2007. Underestimation of species richness in Neotropical frogs revealed by mtDNA analyses. PLoS ONE 2: e1109.
  • Fouquette MJ Jr. 1960. Call structure in frogs of the family Leptodactylidae. The Texas Journal of Science 12: 201-215.
  • Frost DR. 2014. Amphibian Species of the World: an Online Reference. New York, USA: American Museum of Natural History. Version 5.6 (19 August 2014). Electronic Database accessible at: http://research.amnh.org/vz/herpetology/amp hibia/
  • Fund W 2014. Eastern Panamanian montane forests. Retrieved from http://www.eoearth.org/view/article/151914.
  • Fund W, Hogan C. 2012. Isthmian-Pacific moist forests. Retrieved from http://www.eoearth.org/view/article/153928, (accessed on 25 September 2013).
  • Gerhardt HC, Huber F. 2002. Acoustic communication in insects and anurans: common problems and diverse solutions. Chicago, IL: University of Chicago press.
  • Hebert PDN, Stoeckle MY, Zemlak TS, Francis CM. 2004. Identification of birds through DNA barcodes. PLoS Biology 2: e312.
  • Hedges SB, Duellman WE, Heinicke MP. 2008. New World direct-developing frogs (Anura: Terrarana): Molecular phylogeny, classification, biogeography, and conservation. Zootaxa 1737: 1-182.
  • Heinicke MP, Duellman WE, Hedges SB. 2007. Major Caribbean and Central American frog faunas originated by oceanic dispersal. Proceedings of the National Academy of Sciences of the USA 104: 10092-10097.
  • Heinicke MP, Duellman WE, Trueb L, Means DB, MacCulloch RD, Hedges SB. 2009. A new frog family (Anura: Terrarana) from South America and an expanded direct-developing clade revealed by molecular phylogeny. Zootaxa 2009: 1-35.
  • Hendrick AV. 1986. Female preferences for male calling bout duration in a field cricket. Behavioral Ecology and Sociobiology 19: 73-77.
  • Hertz A, Hauenschild F, Lotzkat S, K ohler € G. 2012. A new golden frog species of the genus Diasporus (Amphibia, Eleutherodactylidae) from the Cordillera Central, western Panama. ZooKeys 196: 23-46.
  • Huang J, Zhang A, Mao S, Huang Y. 2013. DNA barcoding and species boundary delimitation of selected species of Chinese Acridoidea (Orthoptera: Caelifera). PLoS ONE 8: e82400.
  • Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
  • Iba nez ~ R, Crawford AJ. 2004. A new species of Eleutherodactylus (Anura: Leptodactylidae) from the Darien Province, Panama. Journal of Herpetology 38: 240-244.
  • Iba nez ~ R, Rand AS, Jaramillo CL. 1999. Los anfibios del Monumento Natural Barro Colourado, Parque Nacional Soberania y areas adyacentes/The amphibians of Barro Colourado Nature Monument, Soberania National Park and adjacent areas. Panama: Editorial Mizrachi & Pujol S.A.
  • IUCN. 2013. IUCN Red List of Threatened Species. Version 2013.1. www.iucnredlist.org (accessed on 20 May 2013).
  • Ivanova NV, Dewaard J, Hebert PDN. 2006. An inexpensive, automation-friendly protocol for recovering high-quality DNA. Molecular Ecology Notes 6: 998-1002.
  • Jimenez C, Vargas LM, Fang JM, Di Filippo J, Daza JM. 2013. Advertisement call of Diasporus anthrax Lynch, 2001 (Anura: Eleutherodactylidae) with comparisons to calls from congeneric species. South American Journal of Herpetology 8: 1-4.
  • J orger € K, Norenburg J, Wilson NG, Schr odl € M. 2012. Barcoding against a paradox? Combined molecular species delineations reveal multiple cryptic lineages in elusive meiofaunal sea slugs. BMC Evolutionary Biology 12: 245.
  • Kimura M. 1981. Estimation of evolutionary distances between homologous nucleotide sequences. Proceedings of the National Academy of Sciences, USA, 78: 454-458.
  • K ohler € G. 2011. Amphibians of Central America. Offenbach, Germany: Herpeton Verlag Elke Kohler.
  • K ohler € G. 2012. Color catalogue for field biologist. Offenbach, Germany: Herpeton Verlag Elke Kohler.
  • Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG. 2007. ClustalW and ClustalX version 2. Bioinformatics 23: 2947-2948.
  • Leary CJ, Jessop TS, Garcia AM, Knapp R. 2004. Steroid hormone profiles and relative body condition of calling and satellite toads: implications for proximate regulation of behavior in anurans. Behavioral Ecology 15: 313-320.
  • Lynch JD. 2001. Three new rainfrogs of the Eleutherodactylus diastema group from Colombia and Panama. Revista de la Academia Colombiana de Ciencias Exactas, Fisicas y Naturales 25: 287-297.
  • Lynch JD, Duellman WE. 1997. Frogs of the genus Eleutherodactylus in western Ecuador. Systematics, ecology, and biogeography. Special Publication. Natural History Museum, University of Kansas 23: 1-236.
  • Montes C, Cardona A, McFadden R, Moron SE, Silva CA, Restrepo-Moreno S, Ramirez DA, Hoyos N, Wilson J, Farris D, Bayona GA, Jaramillo CA, Valencia V, Bryan J, Flores JA. 2012a. Evidence for middle Eocene and younger land emergence in Central Panama: implications for Isthmus closure. Geological Society of America Bulletin 124: 780-799.
  • Montes C, Bayona GA, Cardona A, Buchs DM, Silva CA, Moron SE, Hoyos N, Ramirez DA, Jaramillo CA, Valencia V. 2012b. Arc-continent collision and orocline formation: closing of the Central American Seaway. Journal of Geophysical Research 117: B04105.
  • Padial JM, K ohler € J, Mu noz ~ A, De la Riva I. 2008. Assessing the taxonomic status of tropical frogs through bioacoustics: geographical variation in the advertisement call in the Eleutherodactylus discoidalis species group (Anura: Brachycephalidae). Zoological Journal of the Linnean Society 152: 353-365.
  • Padial JM, Miralles A, De la Riva I, Vences M. 2010. Review: the integrative future of taxonomy. Frontiers in Zoology, 7: 1-14.
  • Parker T, Carrion J, Samudio R. 2004. Environment, biodiversity, water, and tropical forest conservation, protection, and management in panama: assessment and Recommendations (Biodiversity and tropical forestry assessment of the USAID/PANAMA Program). Washington, PA: Chemonics International Inc. Task Order# 824, BIOFOR IQC No. LAG-I-00-99-00014-00.
  • Paz A, Crawford AJ. 2012. Molecular-based rapid inventories of sympatric diversity: a comparison of DNA barcode clustering methods applied to geography-based vs cladebased sampling of amphibians. Journal of Biosciences 37: 1-10.
  • Pinto-Sanchez NR, Iba nez ~ R, Madri nan ~ S, Sanjur OI, Bermingham E, Crawford AJ. 2012. The Great American Biotic Interchange in frogs: multiple and early colonization of Central America by the South American genus
  • Pinto-Sanchez NR, Crawford AJ, Wiens J. 2014. Using historical biogeography to test for community saturation. Ecology letters, 17: 1077-1085.
  • Posada D. 2008. jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution 25: 1253-1256.
  • Puillandre N, Lambert A, Brouillet S, Achaz G. 2011. ABGD, automatic barcode gap discovery for primary species delimitation. Molecular Ecology, 21: 1864-1877.
  • Rambaut A, Drummond A. 2009. Tracer 1.5. Edinburgh, UK: University of Edinburgh. http://tree.bio.ed.ac.uk/software/ tracer/
  • Ryan MJ, Cocroft RB, Wilczynski W. 1990. The role of environmental selection in intraspecific divergence of male recognition signals in the cricket frog, Acris crepitans. Evolution 44: 1869-1872.
  • Sabaj Perez MH. 2013. Standard symbolic codes for institutional resource collections in herpetology and ichthyology. An online reference. Version 4.0 (28 June 2013). Available from http://www.asih.org/ (accessed 18 October 2014).
  • Savage JM. 1973. Herpetological collections made by Dr. John F. Bransford, assistant surgeon, U.S.N. duringthe Nicaragua and Panama Canal Surveys (1872-1885). Journal of Herpetology 7: 35-38.
  • Savage JM. 1987. Systematics and distribution of the Mexican and Central American rainfrogs of the Eleutherodactylus gollmeri group (Amphibia: Leptodactylidae). Fieldiana: Zoology 33: 1-57.
  • Savage JM. 1997. A new species of rainfrog of the Eleutherodactylus diastema group from the Alta Talamanca region of Costa Rica. Amphibia-Reptilia 18: 241-247.
  • Savage JM. 2002. The amphibians and reptiles of Costa Rica: a herpetofauna between two continents, between two seas. Chicago: University of Chicago Press.
  • Schwartz JJ. 1991. Why stop calling? A study of unison bout singing in a Neotropical treefrog. Animal Behavior 42: 565-577.
  • Shen YY, Chen X, Murphy RW. 2013. Assessing DNA barcoding as a tool for species identification and data quality control. PLoS ONE 8: e57125.
  • Sim oes ~ PI, Lima A. 2011. The complex advertisement calls of Allobates myersi (Pyburn, 1981) (Anura: Aromobatidae) from S ao ~ Gabriel da Cachoeira, Brazil. Zootaxa 2988: 66-68.
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731-2739.
  • Taylor EH. 1955. Additions to the known herpetological fauna of Costa Rica with comments on other species. No. II. University of Kansas Science Bulletin 37: 499-575.
  • Trewick SA. 2008. DNA Barcoding is not enough: mismatch of taxonomy and genealogy in New Zealand grasshoppers (Orthoptera: Acrididae). Cladistics 24: 240-254.
  • Ursprung E, Ringler M, H odl € W. 2009. Phonotactic approach pattern in the neotropical frog Allobates femoralis: A spatial and temporal analysis. Behaviour 146: 153-170.
  • Vences M, Thomas M, Van der Meijden A, Chiari Y, Vieites DR. 2005. Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians. Frontiers in Zoology 2: 1-12.
  • Vieites DR, Wollenberg KC, Andreone F, K ohler € J, Glaw F, Vences M. 2009. Vast underestimation of Madagascar's biodiversity evidenced by an integrative amphibian inventory. Proceedings of the National Academy of Sciences of the USA 106: 8267-8272.
  • Wilczynski W, Brenowitz EA. 1988. Acoustic cues mediate inter-male spacing in a Neotropical frog. Animal Behavior 36: 1054-1063.