Published December 31, 2013 | Version v1
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Taxonomic adjustments in the systematics of the southern African lacertid lizards (Sauria: Lacertidae)

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Edwards, Shelley, Branch, William R., Vanhooydonck, Bieke, Herrel, Anthony, Measey, G. John, Tolley, Krystal A. (2013): Taxonomic adjustments in the systematics of the southern African lacertid lizards (Sauria: Lacertidae). Zootaxa 3669 (2): 101-114, DOI: 10.11646/zootaxa.3669.2.1

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https://www.checklistbank.org/dataset/43473
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urn:lsid:zoobank.org:pub:4A8C9C02-DE18-47B8-8CB7-7F90B89B16AD
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urn:lsid:plazi.org:pub:FFB91F48FF9A2A4E677CFFF9AF7EDB38
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http://publication.plazi.org/id/FFB91F48FF9A2A4E677CFFF9AF7EDB38

References

  • Arnold, E.N. (1986) The hemipenis of lacertid lizards (Reptilia: Lacertidae): structure, variation and systematic implications. Journal of Natural History, 20(5), 1221-1257.
  • http://dx.doi.org/10.1080/00222938600770811
  • Arnold, E.N. (1989) Towards a phylogeny and biogeography of the Lacertidae: relationships within an Old-World family of lizards derived from morphology. Bulletin of the Natural History Museum of Zoology, 55, 209-257.
  • Arnold, E. N. (1991) Relationships of the South African lizards assigned to Aporosaura, Meroles and Pedioplanis (Reptilia: Lacertidae). Journal of Natural History, 25(3), 783-807
  • http://dx.doi.org/10.1080/00222939100770511
  • Arnold, E.N. (2002) History and function of scale microornamentation in lacertid lizards. Journal of Morphology, 252, 145- 169
  • http://dx.doi.org/10.1002/jmor.1096
  • Arnold, E.N., Arribas, O. & Carranza, S. (2007) Systematics of the Palaearctic and Oriental lizard tribe Lacertini (Squamata: Lacertidae: Lacertinae), with descriptions of eight new genera. Zootaxa, 1430, 1-86.
  • Barros, F.C., Herrel, A. & Kohlsdorf, T. (2011) Head shape evolution in Gymnophthalmidae: does habitat use constrain the evolution of cranial design in fossorial lizards? Journal of Evolutionary Biology, 24, 2423-2433. http://dx.doi.org/10.1111/j.1420-9101.2011.02372.x
  • Bedriaga, J. von (1884) Die neueLacertiden-Gattung Latastia und ihreArten (L. doriai n.sp. var. Martensi m., SamharicaBlanf. und Boscain.sp.). Annali del Museocivico di storianaturale Giacomo Doria, 20, 307-324.
  • Branch, W. (1998) Field guide to snakes and other reptiles of southern Africa, Struik Publishers, Cape Town, South Africa. pp. 160-176.
  • Branch, W.R. & Whiting, M.J.(1997) A new Platysaurus (Squamata: Cordylidae) from the Northern Cape Province, South Africa. African Journal of Herpetology, 46(2), 124-136.
  • http://dx.doi.org/10.1080/21564574.1997.9649987
  • Conradie, W., Measey, G.J., Branch, W.R. & Tolley, K.A. (2012) Revised phylogeny of African sand lizards (Pedioplanis), with the description of two new species from south-western Angola. African Journal of Herpetology, 61(2), 91-112 http://dx.doi.org/10.1080/21564574.2012.676079
  • Edwards, S., Vanhooydonck, B., Herrel, A., Measey, G.J. & Tolley, K. (2012) Convergent evolution associated with habitat decouples phenotype from phylogeny in a clade of lizards. Public Library of Science One, 7(12), e51636. http://dx.doi.org/10.1371/journal.pone.0051636
  • Engleder, A., Haring, E., Kirchhof, S. & Mayer, W. (2013) Multiple nuclear and mitochondrial DNA sequences provide new insights into the phylogeny of South African Lacertids (Lacertidae, Eremiadinae). Journal of Zoological Systematics and Evolutionary Research, 51(2), 132-143.
  • http://dx.doi.org/10.1111/jzs.12012
  • Farris, J.S., Kallersjo, M., Kluge, A.G. & Bult, C. (1994) Testing significance of congruence. Cladistics, 10, 315-320. http://dx.doi.org/10.1111/j.1096-0031.1994.tb00181.x
  • Farris, J.S., Kallersjo, M., Kluge, A.G. & Bult, C. (1995) Constructing a significance test for incongruence. Systematic Biology, 44, 570-572.
  • http://dx.doi.org/10.1093/sysbio/44.4.570
  • Fitzinger, L.J. (1826) Neue classification der reptilian nachihrennaturlichenverwandtschaften. Nebsteinerverwandtschaftstafel und einemverzeichnisse der reptilien-sammlung des K.K. zoologischen museum `s zu Wien. J.G. Heubner, Wien, 66 pp.
  • Fitzinger, L. (1843) Systemareptilium. Fasciculus primus, Amblyglossae. Vindobonae, Vienna, 106 pp.
  • FitzSimons, V.F.M. (1933) Descriptions of five new lizards from the Transvaal and southern Rhodesia. Annals of the Transvaal Museum, 1933, 273-281.
  • FitzSimons, V.F.M. (1943) The lizards of South Africa. Transvaal Museum Memoirs, 1, 1-528.
  • Goldman, N. & Yang, Z.H. (1994) A codon-based model of nucleotide substitution for protein coding DNA sequences. Molecular Biology and Evolution, 11, 725-736.
  • Goldman, N., Anderson, J.P. & Rodrigo, A.G. (2000) Likelihood-based tests of topologies in phylogenetics. Systematic Biology, 49, 652-670.
  • http://dx.doi.org/10.1080/106351500750049752
  • Goncalves, D.V., Brito, J.C., Crochet, P-A., Geniez, P., Padial, J.M. & Harris, D.J. (2012) Phylogeny of North African Agama lizards (Reptilia: Agamidae) and the role of the Sahara desert in vertebrate speciation. Molecular Phylogenetics and Evolution, 64(3), 582-591.
  • http://dx.doi.org/10.1016/j.ympev.2012.05.007
  • Gray, J.E. (1838) Catalogue of the slender-tongued saurians, with descriptions of many new genera and species. Part 1. Annals of natural history, 1(1), 274-283.
  • http://dx.doi.org/10.1080/00222933809512291
  • Gray, J.E. (1864) Notes on some new lizards from south-eastern Africa, with the descriptions of several new species. Proceedings of the Zoological Society, London, 1864, 58-62.
  • Greenbaum, E., Villnueva, C.O., Kusamba, C., Aristote, M.M., & Branch, W.R. (2011) A molecular phylogeny of Equatorial African Lacertidae, with the description of a new genus and species from eastern Democratic Republic of the Congo. Zoological Journal of the Linnean Society, 163, 913-942
  • http://dx.doi.org/10.1111/j.1096-3642.2011.00732.x
  • Hall, T.A. (1999) BioEdit, a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT.Nucleic Acids Symposium Series (Oxford), 41, 95-98.
  • Harris, D.J., Arnold, E.N., & Thomas, R.H. (1998) Relationships of lacertid lizards (Reptilia: Lacertidae) estimated from mitochondrial DNA sequences and morphology. Proceedings of the Royal Society (London) B, 265, 1939-1948. http://dx.doi.org/10.1098/rspb.1998.0524
  • Harris, D.J., Batista, V. & Carretero, M.A. (2004) Assessment of genetic diversity within Acanthodactylus erythrurus (Reptilia: Lacertidae) in Morocco and the Iberian Peninsula using mitochondrial DNA sequence data. Amphibia-Reptilia, 25, 227- 232.
  • http://dx.doi.org/10.1163/1568538041231229
  • Herrel, A., Meyers, J.J., &Vanhooydonck, B. (2002) Relations between microhabitat use and limb shape in phrynosomatid lizards. Biological Journal of the Linnean Society, 77, 149-163.
  • http://dx.doi.org/10.1046/j.1095-8312.2002.00101.x
  • Herrel, A., DaCostaCottam, M., Godbeer, K., Sanger, T., & Losos, J.B. (2011) An ecomorphological analysis of native and introduced populations of the endemic lizard Anolis maynardi of the Cayman Islands. Breviora, 522, 1-10. http://dx.doi.org/10.3099/0006-9698-522.1.1
  • Herrel, A., Tolley, K.A., Measey, G.J., daSilva, J.M., Potgieter, D.F., Biostel, R. & Vanhooydonck, B. (2013) Slow but tenacious: an analysis of running and gripping performance in chameleons. Journal of Experimental Biology, 216(6), 1025-1030
  • http://dx.doi.org/10.1242/jeb.078618
  • Hewitt, J. (1926) Some new or little-known reptiles and batrachians from South Africa. Annals of the South African Museum, 20, 473-490
  • Hopkins, K.P., & Tolley, K.A. (2011) Morphological variation in the Cape Dwarf Chameleon (Bradypodion pumilum) as a consequence of spatially explicit habitat structure differences. Biological Journal of the Linnean Society, 102(4), 878-888. http://dx.doi.org/10.1111/j.1095-8312.2011.01618.x
  • Huelsenbeck, J.P. & Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogeny. Bioinformatics, 17, 754-755.
  • Jacobsen, N.H.G. (1989). A herpetological survey of the Transvaal. Ph.D. thesis, University of Natal, Durban, 1621 pp.
  • Kapli, P., Poulakakis, N., Lymberakis, P. & Mylonas, M. (2011) A re-analysis of the molecular phylogeny of Lacertidae with currently available data. Basic Applied Herpetology, 25, 97-104.
  • Kelly, C. M. R., Branch, W.R., Broadley, D.G., Barker, N.P. & Villet, M.H. (2011) Molecular systematics of the African snake family Lamprophiidae Fitzinger, 1843 (Serpentes: Elapoidea), with particular focus on the genera Lamprophis Fitzinger 1843 and Mehelya Csiki 1903. Molecular Phylogenetics and Evolution, 58, 415-426.
  • http://dx.doi.org/10.1016/j.ympev.2010.11.010
  • Kirchhof, S. & Richter, K. (2009) Einekaumbekannte Eidechse: die Soutpansberg-Felseidechse Australolacerta rupicola (FitzSimons, 1933). Die Eidechse, 20, 33-40.
  • Kirchhof, S., Linden, J., Rodder, D. & Richter, K. (2010a) Daily activity patterns of Australolacerta rupicola (FitzSimons, 1933) (Sauria: Lacertidae) with comments on niche segregation within a synoptic lizard community. North-Western Journal of Zoology, 6(2), 172-181.
  • Kirchhof, S., Linden, J., Rodder, D. & Richter, K. (2010b) Foraging mode of Australolacerta rupicola (FitzSimons, 1933) (Sauria: Lacertidae): evidence of seasonal variation in an extremely active predator? Journal of Natural History, 44(47- 48), 2941-2953.
  • http://dx.doi.org/10.1080/00222933.2010.502595
  • Kirchhof, S., Jacobsen, N. & Richter, K. (2012) Intraspecific variation of morphology, colouration, pholidosis, and tail loss rate in a relic lacertid of South Africa, Australolacerta rupicola (Sauria: Lacertidae). Salamandra, 48(3), 125-132.
  • Leache, A.D., Chong, R.A., Papenfuss, T.J., Wagner, P., Bohme, W., Schmitz, A., Rodel, M.-oliver, Breton, M.L.E., Ineich, I. & Chirio, L. (2009) Phylogeny of the genus Agama based on mitochondrial DNA sequence data. Bonner Zoologische Beitrage, 56, 273-278.
  • Makokha, J.S., Bauer, A.A., Mayer, W. & Matthee, C.A. (2007) Nuclear and mtDNAbased phylogeny of southern African sand lizards, Pedioplanis (Sauria: Lacertidae). Molecular Phylogenetics and Evolution, 44, 622-633 http://dx.doi.org/10.1016/j.ympev.2007.04.021
  • Matschie (1893) Philochortus neumanni MTSCH. g. n. et sp. n. - Sitzungsberichte der Gesellschaft Naturforschender Freundezu Berlin, 1893, 30.
  • Mayer, W. & Pavlicev, M. (2007) The phylogeny of the family Lacertidae (Reptilia) based on nuclear DNA sequences: Convergent adaptations to arid habitats within the subfamily Eremiainae. Molecular Phylogenetics and Evolution, 44, 1155-1163.
  • http://dx.doi.org/10.1016/j.ympev.2007.05.015
  • Measey, G.J., Hopkins, K. & Tolley, K.A. (2009) Morphology, ornaments and performance in two chameleon ecomorphs: is the casque bigger than the bite? Zoology, 112, 217-226.
  • Muse, S.V. & Gaut, B.S. (1994) A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome. Molecular Biology and Evolution, 11, 715-724
  • Oppel, M. (1811) Die Ordnungen, Familien und Gattungen der Reptilien, als Prodromeiner Naturgeschichtederselben. Munchen: Joseph Lindauer, xii+87 pp
  • Peters, W.C.H. (1854) Diagnosenneuer Batrachier, welchezusammenmit der fruher (24.Juli und 17.August) gegebenen Ubersicht der Schlangen und Eidechsenmit getheiltwerden. Berichtuber die zur Bekanntmachunggeeigneten Verhandlungen der Koniglichen Preussische Akademie des Wissenschaftenzu Berlin, 1854, 614-628.
  • Posada, D. & Crandall, K.A. (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics, 14(9), 817-818. http://dx.doi.org/10.1093/bioinformatics/14.9.817
  • Rambaut, A. & Drummond, A.J. (2007) Tracer version 1.5. Computer program and documentation distributed by author, Available from: http://beast.bio.ed.ac.uk/Tracer (Accessed July 2011)
  • Revell, L.J., Johnson, M.A., Schulte, J.A., Kolbe, J.J. & Losos, J.B. (2007) A phylogenetic test for adaptive convergence in rock-dwelling lizards. Evolution, 61(12), 2898-2912.
  • http://dx.doi.org/10.1111/j.1558-5646.2007.00225.x
  • Ronquist, F. & Huelsenbeck, J.P. (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574.
  • http://dx.doi.org/10.1093/bioinformatics/btg180
  • Salvi, D., Bombi, P. & Vignoli, L. (2011) Phylogenetic position of the southern rock lizard Australolacerta australis within the Lacertidae radiation. African Journal of Herpetology, 60(1), 60-69.
  • http://dx.doi.org/10.1080/21564574.2010.547609
  • Shapiro, B., Rambaut, A. & Drummond, A.J. (2006) Choosing Appropriate Substitution Models for the Phylogenetic Analysis of Protein-Coding Sequences. Molecular Biology and Evolution, 23(1), 7-9.
  • http://dx.doi.org/10.1093/molbev/msj021
  • Shimodaira, H. (2002) An Approximately Unbiased Test of Phylogenetic Tree Selection. Systematic Biology, 51, 492-508. http://dx.doi.org/10.1080/10635150290069913
  • Shimodaira, H. & Hasegawa, M. (1999) Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Molecular Biology and Evolution, 16, 1114-1116.
  • http://dx.doi.org/10.1093/oxfordjournals.molbev.a026201
  • Siesser, W.G. (1978) Aridification of the Namib Desert: evidence from oceanic cores. In: van Zinderen Bakker, E.M. (Ed.), Antarctic Glacial History and World Palaeoenvironments. A.A. Balkema, Rotterdam, The Netherlands, pp. 105-113.
  • Siesser W.G. (1980) Late Miocene origin of the Benguela upwelling system off northern Namibia. Science, 208, 283-285 http://dx.doi.org/10.1126/science.208.4441.283
  • Smith, A. (1838) Contributions to the Natural History of Southern Africa. Art. VIII. Magazine of natural history, London, 2 (14), 92-94.
  • Spawls, S., Howell, K., Drewes, R. & Ashe, J. (2002) A field guide to the reptiles of East Africa. London: Academic Press, 544 pp.
  • Stamatakis, A. (2006) RAxML-VI-HPC: Maximum Likelihood-based Phylogenetic Analyses with Thousands of Taxa and Mixed Models. Bioinformatics, 22(21), 2688-2690.
  • http://dx.doi.org/10.1093/bioinformatics/btl446
  • Stamatakis, A., Hoover, P. & Rougemont, J. (2008) A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology, 57, 758-771.
  • http://dx.doi.org/10.1080/10635150802429642
  • Swofford, D.L. (2002) PAUP*.Phylogenetic Analysis Using Parsimony (*and Other Methods), 4.0 edn. Sunderland, MA, USA: Sinauer Associates.
  • Szczerbak, N.N. (1975) Katalogafrikanskih Jascurok. (Catalog of the African Sand lizards). - Naukova Dumka, Kiev, 83 pp.
  • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution, 24, 1596-1599.
  • http://dx.doi.org/10.1093/molbev/msm092
  • Tilbury, C.R., Tolley, K.A. & Branch, W.R. (2006) A review of the genus Bradypodion (Sauria: Chamaeleonidae), with the description of two new genera. Zootaxa, 1363, 23-38.
  • Uetz, P. (2012) The Reptile Database. Available from: http://www.reptiledatabase.org/ (Accessed 4 June 2013)
  • Vanhooydonck, B. & Van Damme, R. (1999) Evolutionary relationships between body shape and habitat use in lacertid lizards. Evolutionary Ecology Research, 1, 785-805.
  • Xia, X., Xie, Z., Salemi, M., Chen, L. & Wang, Y. (2003) An index of substitution saturation and its application. Molecular Phylogenetics and Evolution, 26, 1-7.