Published August 25, 2014 | Version v1
Dataset Open

VCF file of Variants in a wide onion cross segregating for bolting

  • 1. The New Zealand Institute for Plant & Food Research Limited
  • 2. University of Otago

Description

VCF (variant call format) file of variants from bulked segregant RNA PoolSeq (BSR-seq) of F2 progeny pools of a wide onion cross segregating for bolting (precocious flowering). The reference assembly is GBGJ00000000.1 http://www.ncbi.nlm.nih.gov/nuccore/656904698

The pools were taken from materials sampled for validation of the AcBlt1 locus as described in http://www.ncbi.nlm.nih.gov/pubmed/24247236

Pools were from bolting or non-bolting plants homozygous at the most closely linked marker to AcBlt1  either for the bolt-associated genotype (AA) or the non-bolt genotype (BB). 

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