Published July 20, 2016 | Version v1
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Exploring phylogenetic relationships of Pteraspidiformes heterostracans (stem-gnathostomes) using continuous and discrete characters

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Randle, Emma, Sansom, Robert S. (2017): Exploring phylogenetic relationships of Pteraspidiformes heterostracans (stem-gnathostomes) using continuous and discrete characters. Journal of Systematic Palaeontology 15 (7): 583-599, DOI: 10.1080/14772019.2016.1208293, URL: http://dx.doi.org/10.1080/14772019.2016.1208293

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  • Agassiz, L. 1845. Monographie des Poissons fossiles du vieux gres rouge ou systeme devonien (Old Red Sandstone) des Iles Britanniques et de Russie. Jent and Gassmann, Neuchatel, 171 pp.
  • Berg, L. S. 1940. Classification of fishes, both recent and fossil. Trudy Zoologischeskogo Instituta, 5, 85-517 [In Russian].
  • Blieck, A. R. M. 1981. Le genre Protopteraspis Leriche (Vertebres, Heterostraces) du Devonien inferieur nord-Atlantique. Palaeontographica. Abteilung A, 173, 141-159.
  • Blieck, A. R. M. 1984. Les Het ´erostrac ´es ´, pteraspidiformes, agnathes du silurien-devonien ´. Cahiers de Paleontologie, CNRS, Paris, 202 pp.
  • Blieck, A. R. M. 2011. From adaptive radiations to biotic crises in Palaeozoic vertebrates: a geobiological approach. Geologica Belgicia, 14, 203-227.
  • Blieck, A. R. M. & Janvier, P. 1999. Silurian-Devonian vertebrate dominated communities, with particular references to agnathans. Pp. 79-105 in A. J. Boucot & J. Lawson (eds) Paleocommunities: a case study from the Silurian and Lower Devonian. Cambridge University Press, Cambridge.
  • Blieck, A. R. M., Elliott, D. K. & Gagnier, P. Y. 1991. Some questions concerning the phylogenetic relationships of heterostracans, Ordovician to Devonian jawless vertebrates. Pp. 1-17 in C. Mee-Mann, L. Yu-hai & G. Zhang (eds) Early vertebrates and related problems of evolutionary biology. Science Press, Beijing.
  • Blieck, A. R. M., Karatajute-Talimaa ˙, V. & Mark-Kurik, E. 2002. Upper Silurian and Devonian heterostracan pteraspidomorphs (Vertebrata) from Severnaya Zemlya ( Russia): a preliminary report with biogeographical and biostratigraphical implications. Geodiversitas, 24, 805-820.
  • Blom, H. 2012. New birkiniid anaspid from the Lower Devonian of Scotland and its phylogenetic implications. Palaeontology, 55, 641-652.
  • Brazeau, M. D. 2011. Problematic character coding methods in morphology and their effects. Biological Journal of the Linnean Society, 104, 489-498.
  • Brotzen, F. 1936. Beitrage zur Vertebratenfauna des Westpodolischen Silurs und Devons. I: Protaspis arnelli n. sp., und Brachipteraspis n. gen. latissima Zych. K. Svenska Vetenskapsakad. Arkiv for ¨zoologi, 22, 1-52.
  • Bryant, W. L. 1933. The fish fauna of Beartooth Bute, Wyoming. Pt. I: the Heterostraci and Osteostraci. Proceedings of the American Philosophical Society, 72, 285-314.
  • Consgreve, C. R. & Lansdell, J. C. 2016. Implied weighting and its utility in palaeontological datasets: a study using modelled phylogenetic matrices. Palaeontology, 59, 447-462.
  • Denison, R. H. 1960. Fishes of the Devonian Holland Quarry Shale of Ohio. Fieldiana: Geology, 11, 555-613.
  • Denison, R. H. 1963. New Silurian Heterostraci from the Southeastern Yukon. Fieldiana: Geology, 14, 105-141.
  • Denison, R. H. 1968. Middle Devonian fishes from the Lemhi Range of Idaho. Fieldiana: Geology, 16, 269-288.
  • Denison, R. H. 1970. Revised classification of Pteraspididae with description of new forms from Wyoming. Fieldiana: Geology, 20, 1-41.
  • Dias-da-Silva, S. & Marsicano, C. 2011. Phylogenetic reappraisal of Rhytidosteidae (Stereospondyli: Trematosauria), temnospondyl amphibians from the Permian and Triassic. Journal of Systematic Palaeontology, 9, 305-325.
  • Dineley, D. L. & Loeffler, E. J. 1976. Ostracoderm Faunas of the Delorme and associated Siluro-Devonian Formations Northwest Territories Canada. Special Papers in Palaeontology, 18, 1-214.
  • Donoghue, P. C. J. & Aldridge, R. J. 2001. Origin of a mineralized skeleton. Pp. 85-105 in P. E. Ahlberg (ed.) Major events in early vertebrate evolution: palaeontology, phylogeny, genetics and development. Taylor & Francis, London.
  • Donoghue, P. C. J. & Keating, J. N. 2014. Early vertebrate evolution. Palaeontology, 57, 879-893.
  • Donoghue, P. C. J. & Smith, M. P. 2001. The anatomy of Turinia pagei (Powrie), and the phylogenetic status of the Thelodonti. Transactions of the Royal Society of Edinburgh, 92, 15-37.
  • Donoghue, P. C. J., Forey, P. L. & Aldridge, R. J. 2000. Conodont affinity and chordate phylogeny. Biological Reviews, 75, 191-251.
  • Elliott, D. K. 1983. New Pteraspididae (Agnatha, Heterostraci) from the Lower Devonian of Northwest Teritories, Canada. Journal of Vertebrate Paleontology, 2, 389-406.
  • Elliott, D. K. 1984. A new Subfamily of the Pteraspididae (agnatha, Heterostraci) from the Upper Silurian and Lower Devonian of Arctic Canada. Palaeontology, 27, 169-197.
  • Elliott, D. K. & Ilyes, R. R. 1996. New Early Devonian pteraspidids (Agnatha, Heterostraci) from Death Valley National Monument, southeastern California. Journal of Paleontology, 70, 152-161.
  • Elliott, D. K., Dineley, D. L. & Johnson, H. G. 2000. A vertebrate fauna from the Middle Devonian Yahatinda Formation of Southwestern Canada. Journal of Paleontology, 74, 123-132.
  • Forey, P. L. & Janvier, P. 1993. Agnathans and the origin of jawed vertebrates. Nature, 361, 129-134
  • Garcia-Cruz, J. & Sosa, V. 2006. Coding quantitative character data for phylogenetic analysis: a comparison of five methods. Systematic Botany, 31, 302-309.
  • Gess, R. W., Coates, M. I. & Rubidge, B. S. 2006. A lamprey from the Devonian period of South Africa. Nature, 443, 981-984.
  • Goloboff, P. A. 2014. Extended implied weighting. Cladistics, 30, 260-272.
  • Goloboff, P. A., Farris, J. S. & Nixon, K. C. 2008. Cladistics TNT, a free program for phylogenetic analysis. Cladistics, 24, 774-786.
  • Goloboff, P. A., Mattoni, C. I. & Quinteros, A. S. 2006. Continuous characters analyzed as such. Cladistics, 22, 1-13.
  • Halstead, L. B. 1973. The heterostracan fishes. Biological Reviews, 48, 279-332.
  • Heintz, N. 1962. The Downtonian and Devonian vertebrates of Spitsbergen, XI - Gigantaspis, a new genus of Family Pteraspidae from Spitsbergen. A preliminary report. Norsk Polarinstitutt Arbok, 1960, 22-27.
  • Ilyes, R. R. & Elliott, D. K. 1994. New Early Devonian pteraspidids (Agnatha, Heterostraci) from east-central Nevada. Journal of Paleontology, 68, 878-892.
  • Jaekel, O. 1919. Die Mundbildung der Placodermen. Sitzungsberichte der Gesellschaft Naturforschender Freunde zu Berlin, 3, 73-110.
  • Janvier, P. 1996. Early Vertebrates. Clarendon Press, Oxford, 393 pp.
  • Janvier, P. 2001. Ostracoderms and the shaping of the gnathostome characters. Pp. 172-186 in P. E. Ahlberg (ed.) Major events in early vertebrate evolution: palaeontology, phylogeny, genetics and development. Taylor & Francis, London.
  • Kner, R. 1847. Ueber die beiden Arten Cephalaspis lloydii und lewisii Agassiz, und einige diesen zun¨achst stehenden Schalenreste. Naturwissenschaftliche abhandlungen Wilhem Haidinger, 14, 159-168.
  • Lankester, E. R. 1868. A monograph of the fishes of the Old Red Sandstone of Britain. The Cephalaspidae. Palaeontographical Society, London.
  • Legg, D. A., Sutton, M. D. & Edgecombe, G. D. 2013. Arthropod fossil data increase congruence of morphological and molecular phylogenies. Nature Communications, 4, 2485.
  • Leriche, M. 1924. Les Pteraspis du Devonien de la Belgique. Bulletin de la Societe ´´belge de geologie ´, de paleontologie ´et d'hydrologie, 33, 143-159.
  • Lundgren, M. & Blom, H. 2013. Phylogenetic relationships of the cyathaspidids (Heterostraci). GFF, 135, 74-84.
  • Moloshnikov, S. V. 2009. Oredezhosteus, a new psammosteid genus (Heterostraci, Psammosteiformes) from the Lower Frasnian (Upper Devonian) of the Main Devonian Field. Paleontological Journal, 43, 197-200.
  • Novitskaya, L. I. 1983. Morphology of the ancient agnathans. Nauka, Moscow, 183 pp. [In Russian].
  • Novitskaya, L. I. 2004. Extinct vertebrates of Russia and adjacent countries: agnathans and early fishes. Geos, Moscow, 436 pp.
  • Novitskaya, L. I. 2007. Evolution of generic and species diversity in agnathans (Heterostraci: Orders Cyathaspidiformes, Pteraspidiformes). Paleontological Journal, 41, 268-280.
  • Obruchev, D. 1967. On the evolution of the Heterostraci. Problemes actuels de Paleontologie, 163, 37-43.
  • O'Reilly, J. E., Puttick, M. N., Parry, L., Tanner, A. R., Tarver, J. E., Fleming, J., Pisani, D. & Donoghue, P. C. J. 2016. Bayesian methods outperform parsimony but at the expense of precision in the estimation of phylogeny from discrete morphological data. Biology Letters, 12, 20160081.
  • Orvig, T. 1961. Notes on some early representatives of the Drepanaspida (Pteraspidimorphi, Heterostraci). Arkiv for zoologi, 36, 515-535.
  • Pern`egre, V. N. 2002. The genus Doryaspis White ( Heterostraci ) from the Lower Devonian of Vestspitsbergen, Svalbard. Journal of Vertebrate Paleontology, 22, 735-746.
  • Pern`egre, V. N. 2003. Un nouveau genre de Pteraspidiformes (Vertebrata, Heterostraci) de la Formation de Wood Bay (D´evonien inf´erieur Spitsberg). Geodiversitas, 25, 261-272.
  • Pern`egre, V. N. 2006. Un nouveau Pteraspidiformes (Vertebrata, Heterostraci) du Devonien inferieur du Spitsberg: nouvelles donnees paleo-ontogeniques. Geodiversitas, 28, 239-248.
  • Pern`egre, V. N. & Elliott, D. K. 2008. Phylogeny of the Pteraspidiformes (Heterostraci), Silurian-Devonian jawless vertebrates. Zoologica Scripta, 37, 391-403.
  • Pern`egre, V. N. & Goujet, D. 2007. The genus Gigantaspis Heintz, 1962 (Vertebrata, Heterostraci) from the Lower Devonian of Spitsbergen. Palaeontology, 50, 323-346.
  • Rae, T. C. 1998. The logical basis for the use of continuous characters in phylogenetic systematics. Cladistics, 14, 221-228.
  • Rasband, W. S. 1997-2015. Image J. US National Institutes of Health, Bethesda. [updated at http://imagej.nih.gov/ij/], accessed 18 October 2014.
  • Romano, M. & Nicosia, U. 2015. Cladistic analysis of Caseidae (Caseasauria, Synapsida): using the gap-weighting method to include taxa based on incomplete specimens. Palaeontology, 58, 1109-1130.
  • Ronquist, F. & Huelsenbeck, J. 2003. MrBayes v. 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574.
  • RStudio Team 2015. RStudio: Integrated Development for R. RStudio Inc., Boston. [updated at http://www.rstudio.com/], accessed 8 September 2014.
  • Sansom, R. S. 2008. The origin and early evolution of the Osteostraci (Vertebrata): a phylogeny for the Thyestiida. Journal of Systematic Palaeontology, 6, 317-332.
  • Sansom, R. S. 2009. Endemicity and palaeobiogeography of the Osteostraci and Galeaspida: a test of scenarios of gnathostome evolution. Palaeontology, 52, 1257-1273.
  • Sansom, R. S., Randle, E. & Donoghue, P. C. J. 2015. Discriminating signal from noise in the fossil record of early vertebrates reveals cryptic evolutionary history. Proceedings of the Royal Society, Series B, 283, 1-8.
  • Sansom, R. S., Freedman, K., Gabbott, S. E., Aldridge, R. J. & Purnell, M. A. 2010. Taphonomy and affinity of an enigmatic Silurian vertebrate, J amoytius kerwoodi White. Palaeontology, 53, 1393-1409.
  • Schl¨uter, C. 1887. Uber Panzerfische und legte neue Arten aus dem Rheinisch-Westfalischen Devon vor. Verhandlungen des Naturhistorischen Vereines der preussischen Rheinlande und Westphalens (Naturwi ss. sect.), Sitz. , 44, 120-128.
  • Soehn, K. L. & Wilson, M. V. H. 1990. A complete, articulated heterostracan from Wenlockian (Silurian) beds of the Delorme Group, Mackenzie Mountains, Northwest Territories, Canada. Journal of Vertebrate Paleontology, 10, 405-419.
  • Stensi¨o, E. A. 1958. Les Cyclostomes fossils ou Ostracodermes. Traite de Zoologie, 13, 173-425.
  • Tarlo, L. B. 1961. Rhinopteraspis cornubica (McCoy), with notes on the classification and evolution of the pteraspids. Acta Palaeontologica Polonica, 6, 367-400.
  • Tarlo, L. B. 1964. Psammosteiformes (Agnatha) - a review with descriptions of new material from the Lower Devonian of Poland. I. General part. Palaeontologica Polonica, 13, 1-135.
  • Tarlo, L. B. 1965. Psammosteiformes (Agnatha) - a review with descriptions of new material from the Lower Devonian of Poland. II. Systematic part. Palaeontologica Polonica, 15, 1-168.
  • Tarrant, P. R. 1991. The ostracoderm Phialaspis from the Lower Devonian of the Welsh Borderland and South Wales. Palaeontology, 34, 399-438.
  • Thiele, K. 1993. The Holy Grail of the perfect character: the cladistic treatment of morphometric data. Cladistics, 9, 275-304.
  • Traquair, R. H. 1896. The extinct Vertebrata of the Moray Firth area. Pp 235-285 in J. H. Harvie-Brown & T. E. Buckley (eds) Vertebrate Fauna of the Moray Basin. Edinburgh.
  • Voichyshyn, V. K. 1999. The new forms of pteraspids (Agnatha, Heterostraci) from Podolian Early Devonian. Vestnik Zoologii, 33, 47-56.
  • Voichyshyn, V. K. 2011. The Early Devonian armoured agnathans of Podolia, Ukraine. Palaeontologica Polonica, 66, 1-210.
  • White, E. I. 1935. The ostracoderm Pteraspis Kner and the relationships of the agnathous vertebrates. Philosophical Transactions of the Royal Society of London, Series B, 225, 381-457.
  • White, E. I. 1961. The Old Red Sandstone of Brown Clee Hill and the adjacent area, II: palaeontology. Bulletin of the British Museum (Natural History). Geology Series, 5, 243-310.
  • Whitley, G. 1940. The Nomenclator Zoologicus and some new fish names. Australian Naturalist, 10, 241-243.
  • Wiens, J. J. 2001. Character analysis in morphological phylogenetics: problems and solutions. Systematic Biology, 50, 689-699.
  • Xu, X. & Pol, D. 2014. Archaeopteryx, paravian phylogenetic analyses, and the use of probability-based methods for palaeontological datasets. Journal of Systematic Palaeontology, 12, 323-334.
  • ˘Zigait e˙, ˘Z. & Blieck, A. 2013. Palaeobiogeography of Early Palaeozoic vertebrates. Memoirs of the Geological Society. London, 38, 449-460.
  • Zych, W. 1931. Fauna ryb dewonu i downtonu Podola: Pteraspidimorphi: Heterostraci. Slowa Polskiego, Lwow, 91 pp.