Anatomical
Summary
- Structural images: 1
- FreeSurfer reconstruction: Pre-existing directory
- Output spaces: MNI152NLin2009cAsym, fsaverage5
Anatomical Conformation
- Input T1w images: 1
- Output orientation: RAS
- Output dimensions: 186x256x256
- Output voxel size: 0.9mm x 0.9mm x 0.9mm
- Discarded images: 0
Skull stripped T1
Stripped T1 placed over an image of the unstripped T1
ANTS BrainExtraction: brain mask over anatomical input
Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_t1_skull_strip.html
T1 segmentation
FAST: segmentation over anatomical
Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_t1_seg.html
T1 to MNI registration
Corrected anatomical T1 image registered into MNI space
Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_t1_2_mni.svg
Surface reconstruction
White and pial surfaces overlaid on T1 image
Filename: reportlets/fmriprep/sub-387/anat/sub-387_T1w_reconall.html
Functional
Reports for Task: rest
Summary
- Slice timing correction: Not applied
- Susceptibility distortion correction: Symmetric normalization (SyN) - no fieldmaps
- Registration: FreeSurfer boundary-based registration (bbregister)
- Functional series resampled to spaces: template, fsaverage5
- Confounds collected: Global signals, DVARS, Framewise displacement, tCompCor, aCompCor, Motion parameters
Susceptibility distortion correction (No fieldmaps)
Results of performing SyN-based SDC on the EPI
Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_syn_sdc.svg
Skull stripped EPI
Skull stripped EPI
Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_epi_mask.html
EPI to T1 registration
EPI was used to generate transformations from EPI space to T1 Space
Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_bbr.svg
aCompCor ROI
Conservative CSF and white matter mask for extracting physiological and movement confounds.
Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_acompcor.html
Top 5% most variable voxels within heavily eroded brain mask.
Filename: reportlets/fmriprep/sub-387/func/sub-387_task-rest_bold_tcompcor.html