Information for 3-GTGCCCAATC (Motif 6)

A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C
p-value:1e-4
log p-value:-9.510e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----GTGCCCAATC--
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTGCCCAATC
ATGCCCACC-
A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

NFYC/MA1644.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTGCCCAATC---
--AGCCAATCAGA
A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTGCCCAATC---
--AACCAATCAGA
A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTGCCCAATC-
ACTAGCCAATCA
A C G T A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTGCCCAATC--
--AGCCAATCGG
A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGCCCAATC--
NTGGCCAATGAG
A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

ZNF449/MA1656.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTGCCCAATC--
CCAAGCCCAACCAG
A C G T A C G T A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTGCCCAATC--
----CCAATCAA
A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGCCCAATC-
-TGCCCAGNHW
A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C G T A G T C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A