Information for 21-TGGAGAATGGGG (Motif 28)

A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A G T C A C G T A G T C A G T C C G T A
p-value:1e-3
log p-value:-8.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background64.7 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAATGGGG---
NNTNNACAATGGGANNN
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGGAGAATGGGG---
-GGAGAAAGGTGCGA
A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGAGAATGGGG
-GAACAATGGN-
A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGAATGGGG
GTGGGGGAGGGG-
A C G T A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGAGAATGGGG
TGGAAAA-----
A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGAGAATGGGG
-RAACAATGGN-
A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGAGAATGGGG
NAGAGAAAGNA-
A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAATGGGG
AATGGAAAAT----
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGAGAATGGGG
-AAACAATGGCA
A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGAGAATGGGG
VVRRAACAATGG--
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T