Information for 17-CCCTTGGAGAGA (Motif 9)

A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A G T C A C G T A G T C G A T C C G T A C T G A C T A G A C T G A C T G
p-value:1e-13
log p-value:-3.208e+01
Information Content per bp:1.894
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.9 +/- 19.6bp
Average Position of motif in Background61.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.4/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTGGAGAGA
NNTCCCCTGGGGANN
A C G T A C G T A C G T A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGGAGAGA
TCCCCTGGGGAC-
A C G T A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T

EBF3/MA1637.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTGGAGAGA
NNTCCCTTGGGAN--
A C G T A C G T A C G T A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTGGAGAGA
NNTCCCTTGGGAN--
A C G T A C G T A C G T A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTGGAGAGA-
DBTCCCHWGGGAVTN
A C G T A C G T A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T
C G T A A C G T A G C T A G T C G A T C G A T C G A C T C G T A C T A G C T A G T C A G T C G A T G A C G A C T C G A T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTTGGAGAGA-
CTCCCTGGGAGGCCN
A C G T A C G T A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCTTGGAGAGA
TCCCNNGGGACN
A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCTTGGAGAGA-
---BTBRAGTGSN
A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCTTGGAGAGA
TCACCTCTGGGCAG-
A C G T A C G T A C G T A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCCTTGGAGAGA
CYWSTGGTCARA
A G T C A G T C A G T C A G C T C G A T C A T G A C T G C G T A A C T G C G T A A C T G C G T A
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A