Information for 4-WCCWGKGYCCRA (Motif 6)

C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A
Reverse Opposite:
A C G T A G C T A C T G A C T G C T A G A G T C G T C A A G T C C G A T C T A G A C T G C G A T
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.830
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif45.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets74.7 +/- 23.8bp
Average Position of motif in Background62.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:WCCWGKGYCCRA----
GGGTGTGCCCAAAAGG
C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Plagl1/MA1615.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WCCWGKGYCCRA-
CCCTGGGGCCAGG
C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A A C G T
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--WCCWGKGYCCRA
TGACCTTTGCCCCA
A C G T A C G T C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WCCWGKGYCCRA
TGACCTTTGCCCTA
A C G T A C G T C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:WCCWGKGYCCRA-
---TGGGGCCCAC
C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A A C G T
A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--WCCWGKGYCCRA-
TGACCTTTGCCCTAN
A C G T A C G T C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:WCCWGKGYCCRA--
----GAGSCCGAGC
C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:WCCWGKGYCCRA-
----ATGCCCACC
C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----WCCWGKGYCCRA
RYHYACCTGB------
A C G T A C G T A C G T A C G T C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-WCCWGKGYCCRA
RTCATGTGAC---
A C G T C G T A A G T C A G T C G C A T A C T G A C G T A C T G A G T C A G T C A G T C C T G A C G T A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T