Information for 20-AAGACGGACACA (Motif 13)

C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A G T C A G T C A C T G A C G T A T G C A C G T A C G T
p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.900
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.9 +/- 25.3bp
Average Position of motif in Background26.2 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGACGGACACA-----
-AGCGGCACACACGCAA
C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGACGGACACA-----
-CGAAGCACACAAAATA
C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAGACGGACACA-----
-----GGACACACCCCC
C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

PRDM4/MA1647.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAGACGGACACA---
----NAGAAACAGNN
C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGACGGACACA
CAAGATGGCGGC-
A C G T C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGACGGACACA-
GAGAACCGAAACTG
A C G T C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAGACGGACACA
---AAGGTCAC-
C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAGACGGACACA--
TTTGAGTGACAGCTA
A C G T C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGACGGACACA-----
ATAAATGACACCTATCA
C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAGACGGACACA-------
----CTCACACAATGGCGC
C G T A C G T A A T C G C G T A A G T C C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C