p-value: | 1e-22 |
log p-value: | -5.216e+01 |
Information Content per bp: | 1.813 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 0.26% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.3 +/- 18.4bp |
Average Position of motif in Background | 44.1 +/- 20.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
REST/MA0138.2/Jaspar
Match Rank: | 1 |
Score: | 0.78 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCACCACGGACA----- TTCAGCACCATGGACAGCGCC |
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REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer
Match Rank: | 2 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCACCACGGACA----- TCAGCACCATGGACAGCTCC |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCACCACGGACA- ---CCAGGAACAG |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCACCACGGACA-- ----CAAGGHCANV |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCACCACGGACA- ---CAAAGGTCAG |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCACCACGGACA --BTCAAGGTCA |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCACCACGGACA --NTCAAGGTCA |
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NR5A1/MA1540.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCACCACGGACA- --GTCAAGGTCAC |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCACCACGGACA- ---TCAAGGTCAN |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCACCACGGACA----- TATTCAAGGTCATGCGA |
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