Information for 3-CGGGTGAAAG (Motif 14)

A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C A C T G
p-value:1e-3
log p-value:-9.141e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background68.6 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGGTGAAAG--
-NAGAGAAAGNA
A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGGTGAAAG-
GAAAGTGAAAGT
A C G T A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

THRB/MA1574.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGGTGAAAG-----
GGGGTCAAAGGTCAT
A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A A G C T

PPARD/MA1550.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGGGTGAAAG-----
AGGGGTCAAAGGTCAA
A C G T A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T C A

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGGTGAAAG----
GGGGTCAAAGGTCA
A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGGTGAAAG----
GGGGTCAAAGGTCA
A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGGTGAAAG----
VNAGGKCAAAGGTCA
A C G T A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGGTGAAAG----
GGGGTCAAAGGTCA
A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGGTGAAAG----
AGGGGTCAGAGGTCA
A C G T A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGGTGAAAG-----
GAGGTCAAAGGTCAC
A G T C A C T G A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C