Information for 3-TGAAGCGTAG (Motif 19)

A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A C T G A G T C A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.576e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background47.9 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGAAGCGTAG
NGAAGC----
A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PAX6/MA0069.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGCGTAG-
AANTCATGCGTGAA
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGAAGCGTAG
--AAGCTTG-
A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:4
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------TGAAGCGTAG-
NGTGTTCAVTSAAGCGKAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGAAGCGTAG-
GAATGACGAATAAC
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGCGTAG
NTCAAGTGG--
A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGCGTAG-
GGGAATTGTAGT
A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGAAGCGTAG
--CAGCC---
A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGAAGCGTAG---
-NCNGTGTAGACG
A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------TGAAGCGTAG
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A