Information for 12-AGCACCWTGGAC (Motif 7)

C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C
Reverse Opposite:
A T C G C G A T A G T C A G T C G C T A G C A T A C T G A C T G A C G T T C A G G T A C A C G T
p-value:1e-32
log p-value:-7.578e+01
Information Content per bp:1.808
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.3 +/- 21.3bp
Average Position of motif in Background53.8 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---AGCACCWTGGAC------
TTCAGCACCATGGACAGCGCC
A C G T A C G T A C G T C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AGCACCWTGGAC------
TCAGCACCATGGACAGCTCC
A C G T A C G T C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGCACCWTGGAC
ACTCCAAGTACTTGGAA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGCACCWTGGAC-
NNNNATGACCTTGANTN
A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCACCWTGGAC---
NTGACCTTTGACCTN
C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C A C G T A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGCACCWTGGAC---
-TGACCTTTGACCTN
C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C A C G T A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGCACCWTGGAC----
TGGACTTTGNNCTNTG
C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGCACCWTGGAC
-TGACCTTGAV-
C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGCACCWTGGAC---
-TGACCTTTGACCCC
C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C A C G T A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGCACCWTGGAC
NTGACCTTGAN-
C G T A A C T G A G T C G T C A A G T C A G T C C G T A C G A T A C T G A C T G C G T A A T G C
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T