Information for 2-ACCTACGA (Motif 3)

C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A
Reverse Opposite:
A C G T A T G C A C T G A C G T C T G A A C T G A C T G A C G T
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.872
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif13.73%
Number of Background Sequences with motif180.9
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets46.7 +/- 24.2bp
Average Position of motif in Background50.8 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ACCTACGA-
CACCTACTAT
A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A A C G T
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACCTACGA-----
RGMCCTACTRTGTGC
A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

POL007.1_BREd/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACCTACGA
NANANAC--
A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ACCTACGA--
NNNNCAACCTTCGNGA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACCTACGA-
NNACTTACCTN
A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

TCF3/MA0522.3/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACCTACGA
CGCACCTGCCC
A C G T A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACCTACGA
CGCACCTGCCG
A C G T A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

TEAD1/MA0090.3/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACCTACGA---
CCACATTCCAGGC
A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A A C G T A C G T A C G T
G A T C G A T C C T G A T G A C C T G A A G C T C G A T G T A C G A T C C G T A C T A G T A C G T G A C

GLI2/MA0734.2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ACCTACGA--
AGACCACCCACGTCG
A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A A C G T A C G T
T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

TEAD4/MA0809.2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACCTACGA--
CCACATTCCAGG
A C G T A C G T C G T A A G T C G T A C A G C T C G T A G T A C A T C G C G T A A C G T A C G T
G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G