Information for 5-YMAMASACATGC (Motif 6)

A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G C G A T A T C G A C G T A C T G A C G T A C T G C T A G
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.862
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.15%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.6 +/- 18.7bp
Average Position of motif in Background51.5 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:YMAMASACATGC-
---GACACATGGC
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T
A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

HES6/MA1493.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:YMAMASACATGC-
---AACACGTGCC
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T
A C G T A C G T A C G T C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C

TCF3/MA0522.3/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:YMAMASACATGC--
---CGCACCTGCCC
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:YMAMASACATGC-
---NACATATGGN
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T
A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YMAMASACATGC--
---CGCACCTGCCG
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:YMAMASACATGC-
---NACACGTGCN
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T
A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YMAMASACATGC-
---NGCACCTGCN
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T
A C G T A C G T A C G T G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YMAMASACATGC-
---TRCACCTGCY
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C A C G T
A C G T A C G T A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:YMAMASACATGC
----ACACGTGC
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:YMAMASACATGC
----RTACGTGC
A G T C G T A C C G T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T C T A G G T A C
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C