Information for 5-ATCWATGT (Motif 20)

C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
Reverse Opposite:
C G T A G T A C G T C A A C G T C G T A C T A G C T G A A C G T
p-value:1e-5
log p-value:-1.195e+01
Information Content per bp:1.801
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif752.5
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets47.3 +/- 26.5bp
Average Position of motif in Background49.1 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ATCWATGT
HNRAATCAAT--
A C G T A C G T A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATCWATGT
DGATCRATAN
A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATCWATGT
NTNATCGATA-
A C G T A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A A C G T

CUX1/MA0754.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATCWATGT
TAATCGATAA
A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATCWATGT
RRTCAATA-
A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ATCWATGT---
TCACCCATCAATAAACA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATCWATGT
TAATCGATAA
A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

ONECUT1/MA0679.2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATCWATGT---
AAAAAATCAATAAATA
A C G T A C G T A C G T A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T A C G T A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCWATGT
TAATCAATTA
A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PBX2/MA1113.2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATCWATGT-
NNTGATTTATGNN
A C G T A C G T A C G T A C G T C G T A A G C T A G T C C G A T G T C A A C G T A C T G C G A T A C G T
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C