Information for 1-GCCACCTRGTGG (Motif 1)

C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G
Reverse Opposite:
G T A C T A G C C G T A T A G C G A C T C T G A T A C G T C A G C A G T C T A G A C T G G T A C
p-value:1e-555
log p-value:-1.278e+03
Information Content per bp:1.767
Number of Target Sequences with motif754.0
Percentage of Target Sequences with motif9.69%
Number of Background Sequences with motif310.7
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets50.0 +/- 19.9bp
Average Position of motif in Background53.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.91
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCTRGTGG---
ANAGTGCCACCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-4
Orientation:reverse strand
Alignment:----GCCACCTRGTGG---
TAGCGCCCCCTGGTGGCCA
A C G T A C G T A C G T A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.89
Offset:-7
Orientation:forward strand
Alignment:-------GCCACCTRGTGG-
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCFL/MA1102.2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCTRGTGG
GCGCCCCCTGNN--
A C G T A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCACCTRGTGG
GCCATCTGTT--
C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTRGTGG--
GGCCYCCTGCTGDGH
A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCTRGTGG-
NGGCCTCCCAGGGAG
A C G T A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

SCRT1/MA0743.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCTRGTGG---
NNCCACCTGTTGAANN
A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G A C G T A C G T A C G T
C G T A T C G A G T A C G T A C C T G A G A T C G A T C C G A T T A C G G A C T C A G T C T A G T G C A G C T A G A C T G C A T

NEUROD1/MA1109.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCTRGTGG
NNNCCATCTGTNN-
A C G T A C G T C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCACCTRGTGG
ACCACCTGTT--
C A T G T G A C A G T C G T C A A G T C A T G C G A C T C T G A A T C G C G A T A T C G C A T G
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T