Information for 21-GCCCTGCTAG (Motif 21)

A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.620e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.0 +/- 9.1bp
Average Position of motif in Background76.2 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCCTGCTAG-
NNCCTGCTGNG
A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTAG---
CCCCCTGCTGTGNN
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTAG-
CCCCCTGCTGTG
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTAG
TGCCCAGNHW-
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTAG-
CCYCCYGCTGDG
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTGCTAG--
NNGCNCTGCGCGGC
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCCTGCTAG--
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTAG----
RGMCCTACTRTGTGC
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCCTGCTAG
CACCTACTAT
A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCTAG----
TCNCCTGCTGNGNNN
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G