Information for 11-ATTAATGCAAAT (Motif 13)

C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A C G T
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ATTAATGCAAAT-
--ATATGCAAATT
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:ATTAATGCAAAT
--TTATGCAAAT
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:ATTAATGCAAAT---
--ATATGCAAATNNN
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU2F3/MA0627.2/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ATTAATGCAAAT--
-AATATGCAAATAA
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:ATTAATGCAAAT---
---WATGCAAATGAG
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATTAATGCAAAT----
TTGTATGCAAATTAGA
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATTAATGCAAAT----
TTGTATGCAAATTAGA
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:8
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ATTAATGCAAAT-
---TATGCAAATC
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.74
Offset:3
Orientation:forward strand
Alignment:ATTAATGCAAAT---
---TATGCWAATBAV
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.74
Offset:2
Orientation:forward strand
Alignment:ATTAATGCAAAT--
--TTATGCAAATTA
C G T A A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A