Information for 7-GGCGCAGCGCCA (Motif 8)

A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A
Reverse Opposite:
G A C T A C T G A C T G A G T C A C T G A G T C G C A T A C T G A G T C A T C G A G T C A T G C
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.780
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif100.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets51.1 +/- 24.0bp
Average Position of motif in Background49.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGCGCAGCGCCA--
NNTGGCACNNTGCCAAN
A C G T A C G T A C G T A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T A C G T
T A G C G A T C C A G T A C T G A C T G G T A C C T G A G T A C T A G C T C A G G A C T C A T G A G T C A G T C T G C A C G T A T A G C

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGCGCAGCGCCA--
NTTGGCACNNNGCCAAN
A C G T A C G T A C G T A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T A C G T
T A C G G A C T A C G T A C T G A T C G A G T C C T G A A G T C A T G C T C A G G A C T A C T G A T G C A G T C G T C A C T G A T A G C

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCGCAGCGCCA-----
AGCTCGGCGCCAAAAGC
A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCGCAGCGCCA
GCCGCGCAGTGCGT
A C G T A C G T A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCGCAGCGCCA-----
CCTTCGGCGCCAAAAGG
A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCAGCGCCA--
TTGGCANNNTGCCAAG
A C G T A C G T A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCGCAGCGCCA-
TGGCACCATGCCAA
A C G T A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NFIB/MA1643.1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGCAGCGCCA----
NNCTTGGCACNATGCCAGGNN
A C G T A C G T A C G T A C G T A C G T A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T A C G T A C G T A C G T
C G A T C T A G A G T C G A C T C A G T T C A G T A C G T G A C G C T A A G T C G T C A T C G A C G A T A C T G G A T C T A G C G T C A C T A G T C A G G A T C G C T A

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCAGCGCCA
GGGGGCGGGGCC-
A C G T A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

YY2/MA0748.2/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGCGCAGCGCCA---
----CGCCGCCATNN
A T C G C T A G A T G C C T A G A G T C C G T A T A C G A G T C A C T G G T A C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T