Information for 2-CCACATGAGGTT (Motif 3)

G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T
Reverse Opposite:
T C G A C G T A A T G C A G T C A G C T G T A C C G T A C A G T C T A G A C G T A C T G A C T G
p-value:1e-5
log p-value:-1.302e+01
Information Content per bp:1.673
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif38.46%
Number of Background Sequences with motif846.9
Percentage of Background Sequences with motif1.81%
Average Position of motif in Targets47.3 +/- 21.3bp
Average Position of motif in Background50.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCACATGAGGTT--
--NNTTGAGGTTNN
G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCACATGAGGTT
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C G T G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCACATGAGGTT
-AACAGGAAGT-
G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

ETV1/MA0761.2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACATGAGGTT--
AAACAGGAAGTGAA
G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T A C G T A C G T
C T G A T C G A T C G A T A G C T G C A A C T G C A T G T G C A G C T A T C A G G A C T C T A G T C G A T C G A

GABPA/MA0062.3/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCACATGAGGTT--
NNACAGGAAGTGNN
G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T A C G T A C G T
C T G A T C G A T C G A T A G C G T C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C A G T C A G

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCACATGAGGTT
TAAGCCACTTGAATTT
A C G T A C G T A C G T A C G T G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCACATGAGGTT-
ATAACCACTTGAAAATT
A C G T A C G T A C G T A C G T G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

MXI1/MA1108.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCACATGAGGTT
GACACATGGC---
A C G T G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCACATGAGGTT
--ACAGGAAGTG
G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ELF1/MA0473.3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCACATGAGGTT--
AAACAGGAAGTGGG
G T A C G T A C G T C A A G T C G C T A A C G T A C T G C T G A C T A G A T C G A C G T A C G T A C G T A C G T
C T G A C T G A T G C A T A G C T G C A A T C G C T A G T G C A C G T A T C A G C G A T T C A G T C A G T A C G