Information for 24-GSMAAGKMCMAG (Motif 35)

A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G C A G T G T A C A G T C A C G T A C G T A C G T A T G C A G T C
p-value:1e-3
log p-value:-7.202e+00
Information Content per bp:1.839
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif146.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets56.0 +/- 21.9bp
Average Position of motif in Background51.2 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GSMAAGKMCMAG
--CAAGGHCANV
A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR6A1/MA1541.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GSMAAGKMCMAG-----
GTCAAGTTCAAGGTCAA
A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GSMAAGKMCMAG
-CAAAGKTCAA-
A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GSMAAGKMCMAG
TCCAAAGTCCAAA
A C G T A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GSMAAGKMCMAG
TCCAAAGTCCAGA
A C G T A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

ZNF682/MA1599.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GSMAAGKMCMAG-
CGGGCCAAGCCCCTAT
A C G T A C G T A C G T A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GSMAAGKMCMAG
TGGAATGTACCA-
A C G T A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GSMAAGKMCMAG
NTCAAGGTCA--
A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GSMAAGKMCMAG
GGAAATTCCC--
A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GSMAAGKMCMAG
GTCAAGGTCAC-
A C T G A T C G G T C A C G T A C G T A A C T G A C T G G T A C A G T C G T C A C G T A A C T G
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T