Information for 15-GGCAARCAAGSA (Motif 16)

A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A
Reverse Opposite:
A C G T T A C G A G T C C A G T A C G T C A T G G A T C C A G T A C G T A C T G A T G C A G T C
p-value:1e-3
log p-value:-8.903e+00
Information Content per bp:1.638
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1622.4
Percentage of Background Sequences with motif3.47%
Average Position of motif in Targets51.3 +/- 31.5bp
Average Position of motif in Background50.2 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGCAARCAAGSA-
AGCGGCACACACGCAA
A C G T A C G T A C G T A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCAARCAAGSA-
CGAAGCACACAAAATA
A C G T A C G T A C G T A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAARCAAGSA
TBGCACGCAA---
A C G T A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCAARCAAGSA---
GTCAACCAAGAATTC
A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A A C G T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

FOXK1/MA0852.2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCAARCAAGSA
AATGTAAACAAGGC
A C G T A C G T A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A
C G T A C T G A C A G T T C A G C G A T T G C A T G C A G T C A A G T C G T C A T C G A T A C G T A C G T G A C

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGCAARCAAGSA
-CCAATCAA---
A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCAARCAAGSA
AAGGCAAGTGT---
A C G T A C G T A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Prdm15/MA1616.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCAARCAAGSA--
AGGAAAACCTGGAGC
A C G T A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

FOXN3/MA1489.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCAARCAAGSA
-GTAAACAA---
A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A
A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCAARCAAGSA
---AAATAAACA
A C T G A T C G G T A C G T C A G T C A C T A G G A T C T C G A G C T A C T A G A T G C C G T A
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A