p-value: | 1e-4 |
log p-value: | -1.024e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 33.33% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 5.0 +/- 0.0bp |
Average Position of motif in Background | 59.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCTTAGTTGG--- GCACAYAGTAGGKCY |
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LHX2/MA0700.2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTAGTTGG-- -NNTAATTGGNN |
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MSX2/MA0708.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAGTTGG --NTAATTGG |
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SOX10/MA0442.2/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTAGTTGG NNCTTTGTTNN |
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PH0006.1_Barhl2/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTAGTTGG----- NNNTTAATTGGTTTTT |
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PH0108.1_Msx3/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTAGTTGG----- NNNTTAATTGGTTTTN |
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Msx3/MA0709.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAGTTGG --NTAATTGN |
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PH0005.1_Barhl1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTAGTTGG----- GNNTTAATTGGTTGTT |
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MSX1/MA0666.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAGTTGG --NTAATTGG |
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LHX9/MA0701.2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAGTTGG --NTAATTAG |
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