Information for 6-AAGTCAACAATC (Motif 6)

C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G C T A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 21.7bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AAGTCAACAATC
AAAAGTCAA-----
A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAACAATC
TAAGTAAACAAA-
A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAGTCAACAATC--
AAAAAGTAAACAAAGAC
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAGTCAACAATC--
AAAAAGTAAACAAACAC
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAGTCAACAATC--
AAAAAGTAAACAAACAC
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGTCAACAATC
AAACAAACATTC
C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGTCAACAATC--
AAAATGTAAACAAACAG
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAACAATC
AAAGTAAACA---
A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCAACAATC
TATGTAAACANG-
A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAACAATC
AAAGTAAACA---
A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A G T A C C T G A C G T A C G A T A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T