Information for 17-GAGCTACT (Motif 22)

A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C T G A G T C A C G T A G T C
p-value:1e-7
log p-value:-1.661e+01
Information Content per bp:1.959
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif152.3
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets47.2 +/- 26.0bp
Average Position of motif in Background51.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTACT------
CNNNGCTACTGTANNN
A C G T A C G T A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTACT------
TNNTGCTACTGTNNNN
A C G T A C G T A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

OSR1/MA1542.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGCTACT---
-TGCTACTGTT
A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGCTACT--
CACCTACTAT
A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAGCTACT------
ACATGCTACCTAATAC
A C G T A C G T A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGCTACT------
ACTTGCTACCTACACC
A C G T A C G T A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTACT----
TTGACCTANTTATN
A C G T A C G T A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTACT------
RGMCCTACTRTGTGC
A C G T A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

OSR2/MA1646.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGCTACT----
NNGCTTCTGTNN
A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

NR1D1/MA1531.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTACT-----
NTGACCTACTGACCC
A C G T A C G T A C T G C G T A C T A G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C