Information for 14-CGCAGCTGCA (Motif 11)

T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
Reverse Opposite:
C A G T A T C G A G T C G T C A C T A G A G T C C A G T C T A G A G T C A C T G
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.693
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif521.8
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets49.8 +/- 26.3bp
Average Position of motif in Background46.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CGCAGCTGCA
CGCAGCTGCG
T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CGCAGCTGCA
SSRGCAGCTGCH
A C G T A C G T T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CGCAGCTGCA
NNCAGCTGNN
T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G

MYOG/MA0500.2/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CGCAGCTGCA-
CAGCAGCTGCTG
A C G T T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

ASCL1/MA1100.2/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CGCAGCTGCA
GGCAGCTGCC
T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CGCAGCTGCA
NNACAGCTGC-
A C G T T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CGCAGCTGCA----
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CGCAGCTGCA--
AGCAGCTGCTNN
T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A A C G T A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCTGCA
CAGCAGCTGN-
A C G T T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CGCAGCTGCA
AGCAGCTGCT
T G A C T C A G A G T C G T C A T C A G G A T C C A G T T C A G A T G C G T C A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T