Information for 10-AGAGCCACAA (Motif 18)

C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C G T A G T C A C G T
p-value:1e-5
log p-value:-1.274e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.2 +/- 23.0bp
Average Position of motif in Background56.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGAGCCACAA--
-AAACCACAGAN
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAGCCACAA-
-AAACCACANN
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAGCCACAA--
NWAACCACADNN
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGAGCCACAA-
-AAACCACAGC
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAGCCACAA
NAAACCACAG
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX3/MA0684.2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGCCACAA--
AAAACCTCAAAT
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C G T A C G T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGAGCCACAA---
---RNAACAATGG
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGAGCCACAA
--ATCCAC--
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGCCACAA
-CAGCC----
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGCCACAA
-AAACCGCAA
C G T A A C T G C G T A A C T G A G T C A G T C C G T A A G T C C G T A C G T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A