Information for 4-AGGCCTTGRATT (Motif 8)

T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T A G C T G A T C T G C A C T G A A C T G A T C G G T A C A G T C A C G T
p-value:1e-6
log p-value:-1.547e+01
Information Content per bp:1.700
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif308.8
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets40.4 +/- 19.5bp
Average Position of motif in Background47.5 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGCCTTGRATT
AGGCCTNG----
T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGCCTTGRATT
AGGCCTAG----
T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTGRATT
TGACCTTGAN--
T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTGRATT-
GCTGACCTTGAACTN
A C G T A C G T T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NR5A1/MA1540.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTTGRATT
NTGACCTTGAN--
A C G T T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTGRATT
TGACCTTGAV--
T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTTGRATT
BNTGDCCTTG----
A C G T A C G T T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTTGRATT-
CAGGCCNNGGCCNN
A C G T T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGCCTTGRATT
TGACCTTGACCT
T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGGCCTTGRATT
TTTTAAGTACTTAAATT
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A C T G A T G C A G T C A G C T A C G T C T A G T C G A C G T A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T