Information for 10-GGGTTTACCC (Motif 13)

A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T C G T A C G T A C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-8.187e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background68.6 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTTACCC-
GGGGATTCCCCC
A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGTTTACCC
GGGGATTTCC-
A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGTTTACCC
GGGGATTTCC-
A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGTTTACCC-
AGGGGATTCCCCT
A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTTACCC
NGGGATTA---
A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGGTTTACCC
NGGGGATTTCCC
A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGTTTACCC
-TGTTTACH-
A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTTACCC-
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

FOXI1/MA0042.2/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGTTTACCC
-TGTTTAC--
A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGTTTACCC
NYYTGTTTACHN
A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A G T C A G T C A G T C
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A