Information for 14-GAAATTAGATTG (Motif 17)

A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T G T A C A C G T G T C A G T C A A C G T A C G T A C G T A G T C
p-value:1e-7
log p-value:-1.644e+01
Information Content per bp:1.925
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.5 +/- 31.9bp
Average Position of motif in Background84.5 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHOX2A/MA0713.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAAATTAGATTG
-TAATTAAATTA
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G
A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAAATTAGATTG-
-TAATTNVATTAN
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G A C G T
A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAAATTAGATTG
-TAATTAAATTA
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G
A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAAATTAGATTG-
-TAATYNRATTAR
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G A C G T
A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAATTAGATTG
GTAATCDGATTA
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

HOXD3/MA0912.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAATTAGATTG
GTAATTAG----
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G
T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G A C G T A C G T A C G T A C G T

PHOX2B/MA0681.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAAATTAGATTG--
NNATAATTTGATTANN
A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAATTAGATTG--
TNGAATTTCATTNAN
A C G T A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

HOXB13/MA0901.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAATTAGATTG---
-NNATTTTATTGGNN
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

TLX2/MA1577.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAATTAGATTG
CTAATTAG----
A C T G C G T A C G T A C G T A A C G T A C G T G T C A A C T G C G T A A C G T A C G T A C T G
A G T C G A C T C T G A C G T A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T