p-value: | 1e-4 |
log p-value: | -1.024e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 33.33% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.0 +/- 0.0bp |
Average Position of motif in Background | 87.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG ---TAATCCCN- |
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OTX2/MA0712.2/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTCTAAGCCCTG NNCTAATCCCNN |
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PITX1/MA0682.2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG --CTAATCCC-- |
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PITX3/MA0714.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG -CTTAATCCC-- |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG -GCTAATCC--- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG -NYTAATCCYB- |
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PH0035.1_Gsc/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTCTAAGCCCTG-- AATCGTTAATCCCTTTA |
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PITX2/MA1547.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG --ATAATCCC-- |
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RHOXF1/MA0719.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG --ATAATCCC-- |
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GSC/MA0648.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTCTAAGCCCTG -GCTAATCCCC- |
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