Information for 22-TTGCTAAGCAAC (Motif 17)

A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G G T A C A C G T C G A T C G T A A C T G G T A C C G T A C G T A
p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.909
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 23.9bp
Average Position of motif in Background68.8 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTAAGCAAC-
KGTTGCTAGGMAACA
A C G T A C G T A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTGCTAAGCAAC---
CCGCATAGCAACGGA
A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTGCTAAGCAAC---
TACCATAGCAACGGT
A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTGCTAAGCAAC-------
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTGCTAAGCAAC--
--SCCTAGCAACAG
A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

RFX1/MA0509.2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGCTAAGCAAC--
TNCCATAGCAACNN
A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

RFX7/MA1554.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTGCTAAGCAAC-
----NTAGCAACG
A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

RFX3/MA0798.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGCTAAGCAAC--
TNCCATAGCAACNN
A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGCTAAGCAAC
-TTCTNMGGAA-
A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTGCTAAGCAAC
NTTTCTNAGAAA-
A C G T A C G T A C G T A C T G G T A C A C G T C G T A G T C A A C T G A G T C C G T A C G T A A G T C
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T