Information for 4-CGCAGGCTGGAG (Motif 4)

A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G
Reverse Opposite:
A T G C G A C T A G T C A G T C C T G A A C T G A T G C A T G C A C G T A C T G G T A C A C T G
p-value:1e-11
log p-value:-2.649e+01
Information Content per bp:1.878
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.9 +/- 29.6bp
Average Position of motif in Background58.8 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCAGGCTGGAG--
-GGGGGCGGGAAGG
A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G A C G T A C G T
A C G T T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGGCTGGAG
TGCGCAGGCGC---
A C G T A C G T A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGCAGGCTGGAG
NNCGCCTCAGGCNN---
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCAGGCTGGAG
--CWGGCGGGAA
A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

TFAP2A/MA0003.4/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGCAGGCTGGAG
ATTGCCTCAGGCCA---
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCAGGCTGGAG
--TWGTCTGV--
A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGCAGGCTGGAG
----NGCTN---
A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCAGGCTGGAG--
----GGCGGGAARN
A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

KLF4/MA0039.4/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCAGGCTGGAG--
--NNGGGTGGGGNN
A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G A C G T A C G T
A C G T A C G T T A C G C A T G C T A G A T C G T A C G G A C T C A T G C A T G C T A G C T A G T A G C A T C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGCAGGCTGGAG--
--GRTGMTRGAGCC
A G T C A C T G A G T C G T C A A T C G A T C G A G T C A G C T A C T G A C T G C T G A A T C G A C G T A C G T
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C