Information for 7-CTGACATTGTGA (Motif 7)

A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A G T C C G T A T C G A A C G T A C T G A C G T A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.899
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.6 +/- 23.1bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTGACATTGTGA
TTGACAG-----
A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGACATTGTGA
VGCTGWCAVB----
A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGACATTGTGA
ARNTGACA------
A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGACATTGTGA
YTGWCADY----
A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGACATTGTGA
--CTCATTGTC-
A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGACATTGTGA
-NNCCATTGTNN
A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
A C G T C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGACATTGTGA-----
-TGACCCAGTGACCTAC
A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGACATTGTGA
-NNCCATTGTNN
A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGACATTGTGA
TTGACAGG----
A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

ESRRA/MA0592.3/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGACATTGTGA
NNTGACCTTGANN
A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T G A C T A C T G A C G T A C T G C G T A
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C