Information for 11-GGGCCCGACAGC (Motif 16)

A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A G T C A C T G A C T G A C T G A G T C A G T C A G T C
p-value:1e-4
log p-value:-9.510e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCCGACAGC
TGGGGCCCAC---
A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCCCGACAGC
NGGGGGCCCN-----
A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGGCCCGACAGC
---CCAGACAG-
A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGGCCCGACAGC
------CACAGN
A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCGACAGC---
CAAATCCAGACATCACA
A C G T A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCCGACAGC
AGGTGNCAGACAG-
A C G T A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCGACAGC
AGGTGHCAGACA--
A C G T A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGGCCCGACAGC-
---CCAGACRSVB
A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGGCCCGACAGC
----TTGACAGC
A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGCCCGACAGC
KGGCCYCWTD--
A C T G A C T G A C T G A G T C A G T C A G T C A C T G C G T A A G T C C G T A A C T G A G T C
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T