Information for 3-CTGGTCATGC (Motif 8)

A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.542e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 20.4bp
Average Position of motif in Background53.0 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTGGTCATGC--
NNGGTCACGCTC
A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGGTCATGC
--AGTCACGC
A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTCATGC
CYWSTGGTCARA-
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGGTCATGC
-AGGTCA---
A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGGTCATGC
WDNCTGGGCA---
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTGGTCATGC-
CGCGCCGGGTCACGTA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

NR1H4/MA1110.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGGTCATGC-
NAGGTCATTGA
A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTCATGC
NTTATTCGTCATNC
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGTCATGC--
CTGCGCATGCGC
A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NR2C1/MA1535.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGGTCATGC
CGAGGTCAC--
A C G T A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T