Information for 13-TARARTWTKKRG (Motif 13)

A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
Reverse Opposite:
A T G C G A C T G T C A G T A C C G T A C G A T C G T A A G T C A C G T A G C T A C G T C G T A
p-value:1e-4
log p-value:-9.956e+00
Information Content per bp:1.802
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif136.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets66.8 +/- 15.3bp
Average Position of motif in Background50.0 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB32/MA1580.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TARARTWTKKRG
TGTACAGTAT----
A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TARARTWTKKRG
AATGCAATAAAATTTAT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TARARTWTKKRG
AACCAATAAAATTT----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TARARTWTKKRG
NGYCATAAAWCH-----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TARARTWTKKRG
CATTAATTATTCAT
A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TARARTWTKKRG---
-CTAATATTGCTAAA
A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TARARTWTKKRG---
-CTAATATTGCTAAA
A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TARARTWTKKRG
CYHATAAAAN------
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------TARARTWTKKRG
TATAATTATAATATTC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------TARARTWTKKRG
AACCCAATAAAATTCG---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G A C G T C G T A A C G T A C T G A C G T C T G A A T C G
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T A C G T