Information for 4-GAGCGAAG (Motif 12)

A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A T G C A T C G G T A C A G C T A T G C
p-value:1e-4
log p-value:-9.211e+00
Information Content per bp:1.805
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif12.08%
Number of Background Sequences with motif2901.3
Percentage of Background Sequences with motif5.87%
Average Position of motif in Targets46.9 +/- 32.5bp
Average Position of motif in Background50.6 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GAGCGAAG-
---NGAAGC
A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAGCGAAG-----
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGCGAAG-
GGCGGGAARN
A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGCGAAG-
GGAACAAAGR
A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAGCGAAG-----
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGCGAAG----
AAAGATCAAAGGGTT
A C G T A C G T A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

TCF7L1/MA1421.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGCGAAG-
AAAGATCAAAGG
A C G T A C G T A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T
G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G

TFDP1/MA1122.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCGAAG-
GGGCGGGAAGG
A C G T A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T
T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G

E2F6/MA0471.2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAGCGAAG-
GGGGGCGGGAAGG
A C G T A C G T A C G T A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G A C G T
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCGAAG
CWGGCGGGAA-
A C G T A C G T A C G T A T C G C T G A C A T G T A G C T A C G T G C A C G T A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T