Information for 5-CGAAGATCAC (Motif 11)

A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A C G T A G T C A C G T A C G T A G T C A C T G
p-value:1e-3
log p-value:-8.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CGAAGATCAC
--AAGGTCAC
A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGAAGATCAC
CAAAGGTCAG
A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGAAGATCAC---
TCTCAAAGGTCACCTG
A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGAAGATCAC
TCAAGGTCAN
A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGAAGATCAC-
CAAAGGTCAAA
A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGAAGATCAC
NBYCAAGGTCAC
A C G T A C G T A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGAAGATCAC
TCAAGGTCAT
A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGAAGATCAC-
---AGATAASR
A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

ESRRA/MA0592.3/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGAAGATCAC-
GCTCAAGGTCACA
A C G T A C G T A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C A C G T
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAAGATCAC
CAAAGKTCAA
A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C C G T A A G T C
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A