p-value: | 1e-9 |
log p-value: | -2.250e+01 |
Information Content per bp: | 1.800 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 9.28% |
Number of Background Sequences with motif | 174.5 |
Percentage of Background Sequences with motif | 0.38% |
Average Position of motif in Targets | 54.6 +/- 26.5bp |
Average Position of motif in Background | 51.1 +/- 28.0bp |
Strand Bias (log2 ratio + to - strand density) | 3.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zic1::Zic2/MA1628.1/Jaspar
Match Rank: | 1 |
Score: | 0.78 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCAGGKYSSMG CACAGCAGGGG---- |
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Zic2/MA1629.1/Jaspar
Match Rank: | 2 |
Score: | 0.74 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AGCAGGKYSSMG CTCACAGCAGGGGG--- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCAGGKYSSMG CACAGCAGGGGG--- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 4 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGCAGGKYSSMG DCHCAGCAGGRGGCC- |
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Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGCAGGKYSSMG SDGCAGGTGCNS- |
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TCF12(var.2)/MA1648.1/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGCAGGKYSSMG NNGCAGGTGNN-- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 7 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGCAGGKYSSMG DCTCAGCAGG------ |
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TCF3/MA0522.3/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGCAGGKYSSMG NNGCAGGTGNN-- |
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Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer
Match Rank: | 9 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCAGGKYSSMG RGCAGGTGYA-- |
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Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCAGGKYSSMG CHCAGCRGGRGG--- |
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