Information for 6-GGCCGTCCTT (Motif 9)

A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-8.187e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR5A1/MA1540.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCCGTCCTT---
--NTGACCTTGAN
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCCGTCCTT-
-BNTGDCCTTG
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

ETV4/MA0764.2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCCGTCCTT-
-NNCTTCCTGN
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCCGTCCTT---
---TGACCTTGAN
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCCGTCCTT------
-GCTGACCTTGAACTN
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ZNF341/MA1655.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGTCCTT
NNGGCTGTTCCN
A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGCCGTCCTT
CTAGGCCT-----
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGTCCTT
CGGCTGTTCC-
A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T
G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C A C G T

YY2/MA0748.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCCGTCCTT-
CGCCGCCATNN
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T

GFI1/MA0038.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCCGTCCTT--
TGCAGTGATTTN
A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G