Information for 23-AGCAGACGCCAG (Motif 17)

C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A T C G A G T C A C T G A G C T A G T C A G C T A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 22.4bp
Average Position of motif in Background47.1 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGCAGACGCCAG
-CCAGACRSVB-
C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCAGACGCCAG
-GCGGACCBWA-
C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
A C G T A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCAGACGCCAG
-CCAGACAG---
C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGACGCCAG
NCGCGGACGTTG-
A C G T C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGCAGACGCCAG
TAACAGCAGACT----
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCAGACGCCAG
ACCAGATGGC--
C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCAGACGCCAG
CACAGCAGGGG----
A C G T A C G T A C G T C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCAGACGCCAG
AACAGATGGC--
C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGCAGACGCCAG
-----ACGTCA-
C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCAGACGCCAG
--CAAAGGTCAG
C G T A A C T G A G T C C T G A A C T G C T G A A G T C A C T G A T G C A G T C C G T A A C T G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G