Information for 10-AGCWGCTGTGKC (Motif 10)

C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
Reverse Opposite:
A C T G T G A C A G T C G T C A G A T C C G T A A C T G T G A C C G T A A C T G A T G C C G A T
p-value:1e-5
log p-value:-1.201e+01
Information Content per bp:1.693
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif68.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets28.7 +/- 12.0bp
Average Position of motif in Background48.8 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGCWGCTGTGKC
ANCAGCTG----
C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGCWGCTGTGKC
CCCCCTGCTGTGNN
A C G T A C G T C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AGCWGCTGTGKC
CCCCCTGCTGTG--
A C G T A C G T C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGCWGCTGTGKC
CAGCAGCTGN---
A C G T C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGCWGCTGTGKC
CCYCCYGCTGDG--
A C G T A C G T C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AGCWGCTGTGKC
GGCCYCCTGCTGDGH-
A C G T A C G T A C G T A C G T C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGCWGCTGTGKC
CGCAGCTGCG--
C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGCWGCTGTGKC
NVCAGCTGBBNN
C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGCWGCTGTGKC
NNCCTGCTGNG--
A C G T C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGCWGCTGTGKC-
TNTCCTGCTGTGNNG
A C G T A C G T C G T A A T C G A G T C G C A T A C T G A G T C C G A T C T A G C A G T A C T G A C T G T A G C A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G