Information for 12-TTTAGAAATAAA (Motif 15)

A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.160e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background47.4 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGAAATAAA
TCTTTANTAATANN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

CDX2/MA0465.2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTTAGAAATAAA--
--AAGCAATAAAAA
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

MEF2A/MA0052.4/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTAGAAATAAA--
TTCTAAAAATAGAAA
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

HOXD9/MA0913.2/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTTAGAAATAAA--
----GCAATAAAAC
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTAGAAATAAA
DCYAAAAATAGM
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TTTAGAAATAAA--
----GTCATAAAAN
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTTAGAAATAAA--
---GGTAATAAAAA
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTAGAAATAAA
AAATAAGAAAAAAC
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTAGAAATAAA----
GTTAAAAAAAAAAATTA
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTAGAAATAAA-
ATGCTAAAAATAGAA
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A