Information for 18-GTCCATCTAT (Motif 26)

A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.494e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background64.3 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATCTAT--
NNNCCATCTGTNN
A C G T A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTCCATCTAT---
NNCCATCTGTNNN
A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTCCATCTAT-
-ACCATCTGTT
A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTCCATCTAT-
-GCCATCTGTT
A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

SRF/MA0083.3/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATCTAT-----
TGNCCATATATGGTCA
A C G T A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTCCATCTAT--
--YCATCMATCA
A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCCATCTAT-
-NTNATCGATA
A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCCATCTAT-----
TCACCCATCAATAAACA
A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCCATCTAT-
-NNCATCTGNN
A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCCATCTAT--
--TCATCAATCA
A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A