Information for 4-ACAGVBGAGGCC (Motif 5)

C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C
Reverse Opposite:
A C T G A T C G A T G C A G T C A C G T A G T C T C G A A G T C A G T C A G C T A C T G A G C T
p-value:1e-4
log p-value:-1.129e+01
Information Content per bp:1.717
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif659.4
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets42.0 +/- 32.4bp
Average Position of motif in Background47.6 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:ACAGVBGAGGCC-
-----CTAGGCCT
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:7
Orientation:forward strand
Alignment:ACAGVBGAGGCC---
-------AGGCCTNG
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:ACAGVBGAGGCC--------
------CAGGCCNNGGCCNN
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ACAGVBGAGGCC-
---HAWGRGGCCM
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T
A C G T A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

ZNF682/MA1599.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACAGVBGAGGCC----
CGGGCCAAGCCCCTAT
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACAGVBGAGGCC--
NNAGGGACAAGGGCNC
A C G T A C G T C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:ACAGVBGAGGCC----
------GAGSCCGAGC
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

NR5A1/MA1540.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACAGVBGAGGCC--
---GTCAAGGTCAC
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACAGVBGAGGCC---
-----CAAGGHCANV
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACAGVBGAGGCC-
-----TRAGGTCA
C T G A G T A C C T G A C T A G T A C G A C G T C T A G C G T A A C T G A T C G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A