Information for 1-AACCGGGTGA (Motif 14)

C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C A G T C A G T C A C T G A C T G A C G T A C G T
p-value:1e-3
log p-value:-9.141e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background18.9 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFCP2/MA0145.3/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AACCGGGTGA
AAACCGGTTT-
A C G T C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AACCGGGTGA
AAAACCGGTTTT
A C G T A C G T C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AACCGGGTGA----
CGCGCCGGGTCACGTA
A C G T A C G T C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

SPDEF/MA0686.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACCGGGTGA-
ACCCGGATGTA
C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AACCGGGTGA-
WAABTAGGTCAV
A C G T C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACCGGGTGA----
AGAGCGGGGTCAAGTA
A C G T A C G T C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACCGGGTGA-
-GTGGGGTGAT
C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

PB0077.1_Spdef_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AACCGGGTGA--
AANNATCCGGATGTNN
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACCGGGTGA---
NNATCAGGTGATNN
A C G T C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T
C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

ETS2/MA1484.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACCGGGTGA
GACCGGAAGT
C G T A C G T A A G T C A G T C A C T G A C T G A C T G A C G T A C T G C G T A
C T A G C T G A T A G C G T A C C T A G T A C G T G C A G C T A C T A G A G C T