Information for 21-GTGTCCTGAGAC (Motif 40)

A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C
p-value:1e-2
log p-value:-6.883e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background37.8 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTGTCCTGAGAC
--RTCATGTGAC
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTGAGAC---
-NNGCCTGAGGCANN
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGTCCTGAGAC---
-GGGCCTGAGGCGGG
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTGAGAC
-TGACCTYA---
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGTCCTGAGAC
ATGCCCTGAGGC
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

USF1/MA0093.3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGTCCTGAGAC--
TGGTCATGTGACCT
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGTCCTGAGAC
GTGACCTT----
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

USF2/MA0526.3/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGTCCTGAGAC--
TGGTCATGTGACCT
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C A G T C T A G T C A G A G C T A T G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G C A T

SIX1/MA1118.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGTCCTGAGAC
GTAACCTGATA-
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTGAGAC---
-TGACCTTTGACCTN
A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C