p-value: | 1e-7 |
log p-value: | -1.721e+01 |
Information Content per bp: | 1.971 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.08% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.8 +/- 28.0bp |
Average Position of motif in Background | 66.9 +/- 7.5bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0159.1_Rfx4_2/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTGACTATG--- NNNGTAACTANGNNA |
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Pax2/MA0067.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGTGACTATG NCGTGACN--- |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGTGACTATG- CTGTTGCTAGGS |
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Sox17/MA0078.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGTGACTATG-- ---GACAATGNN |
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RFX1/MA0509.2/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTGACTATG--- CTGTTGCTATGGCA |
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RFX3/MA0798.2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTGACTATG--- CGGTTGCTATGGCA |
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SOX2/MA0143.4/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTGACTATG--- --AAACAATGGAA |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTGACTATG--- NCCGTTGCTANGNGN |
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SOX13/MA1120.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTGACTATG--- --AAACAATGGCA |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AGTGACTATG------- NNTNGNNGTAACCAAGNNNNAGN |
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