Information for 24-GTCTTAGGTG (Motif 37)

A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A C G T C G T A C G T A A C T G C G T A A G T C
p-value:1e-2
log p-value:-6.883e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background39.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GTCTTAGGTG---
-----AGGTGTCA
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTCTTAGGTG---
-----AGGTGTGA
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTCTTAGGTG--
---TTAAGTGGT
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCTTAGGTG-----
--NTTAAGTGGTTNN
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTAGGTG------
NTNNTTAAGTGGNTNAN
A C G T A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTCTTAGGTG---
-----AGGTGTGA
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTAGGTG------
NTNNTTAAGTGGTTANN
A C G T A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTCTTAGGTG----
----DAGGTGTBAA
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A

TBX6/MA1567.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTCTTAGGTG----
----GAGGTGTGAA
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTCTTAGGTG-
---TTAAGTGC
A C T G A C G T A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T
A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C