Information for 14-GTCATTGC (Motif 13)

A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C G T T C A G C G T A A G T C
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.924
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif216.9
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets53.0 +/- 26.4bp
Average Position of motif in Background47.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GTCATTGC
NAGGTCATTGA
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

HOXD8/MA0910.2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTCATTGC
GTAATTGC
A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C

LHX1/MA1518.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTCATTGC
NTAATTGN
A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
A T C G G C A T T C G A C G T A C G A T A C G T C T A G T A G C

HOXB8/MA1502.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCATTGC
NTAATTGC
A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
A C T G A C G T G T C A C G T A A C G T A C G T C T A G T G A C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCATTGC----
GGGATTGCATNN
A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTCATTGC-
TTTNATTGCY
A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C A C G T
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C

HOXA7/MA1498.1/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCATTGC
GTAATTGC
A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
A T C G A C G T G T C A C G T A C G A T A C G T T C A G T A G C

CDX2/MA0465.2/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTCATTGC--
NTTTTATTGCNN
A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C A C G T A C G T
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

HOXA5/MA0158.2/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCATTGC
GTAATTAC
A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
A T C G A C G T G T C A C G T A A C G T A C G T C T G A T A G C

DLX5/MA1476.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTCATTGC
NTAATTGC
A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C
T C A G A C G T C G T A C G T A A C G T A C G T C T A G A T G C