Information for 12-CCCCCGGG (Motif 10)

G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G
Reverse Opposite:
T A G C A G T C T G A C C A T G A C T G A C T G A C T G C T A G
p-value:1e-15
log p-value:-3.672e+01
Information Content per bp:1.797
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif352.7
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets49.5 +/- 25.2bp
Average Position of motif in Background50.9 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGG-----
CCCCCCCGGGGGGGT
A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGG-----
CCCCCCCGGGGGGGT
A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGG----
CACCCCCGGGGGGG
A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T A C G T A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCCCCGGG---
TCCCCTGGGGAC
A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

EBF1/MA0154.4/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CCCCCGGG----
AGTCCCCAGGGGACT
A C G T A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T A C G T A C G T
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.77
Offset:-6
Orientation:forward strand
Alignment:------CCCCCGGG---
AAATTCCCCCCGGAAGT
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGG--
TGCCCCCGGGCA
A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

CTCFL/MA1102.2/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CCCCCGGG-
GCGCCCCCTGNN
A C G T A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGG--
TGCCCCAGGGCA
A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGG--
TGCCCCAGGGCA
A C G T A C G T G A T C G T A C T G A C A G T C G T A C A C T G T C A G A T C G A C G T A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A