Information for 18-TTGGCCTCTC (Motif 19)

A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C C G T A C G T A
p-value:1e-2
log p-value:-6.839e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif30.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background55.8 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTGGCCTCTC-
-KGGCCYCWTD
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C A C G T
A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGGCCTCTC
TTGAMCTTTG
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGGCCTCTC
-TGACCTYA-
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGGCCTCTC
-TGACCYCT-
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCTCTC---
NNNNTTGACCCCTNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCTCTC
NTTGGCANN--
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTGGCCTCTC
CTCATTGGCCAG--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCCTCTC---
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCTCTC
CTAGGCCT---
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Plagl1/MA1615.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCTCTC--
NNTGGCCCCAGNN
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G