Information for 2-AACAGCCT (Motif 11)

C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
Reverse Opposite:
C G T A T C A G T A C G A G T C A C G T C T A G A C G T C G A T
p-value:1e-4
log p-value:-1.083e+01
Information Content per bp:1.795
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif6.79%
Number of Background Sequences with motif1052.7
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets38.0 +/- 24.9bp
Average Position of motif in Background49.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF341/MA1655.1/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AACAGCCT-
GGGAACAGCCAC
A C G T A C G T A C G T C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AACAGCCT
GGAACAGCCG
A C G T A C G T C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

GRHL2/MA1105.2/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AACAGCCT--
AAAACAGGTTTT
A C G T A C G T C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T A C G T A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AACAGCCT
CACAGN--
C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCCT
YAACBGCC-
A C G T C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AACAGCCT
NAGAAACAGNN-
A C G T A C G T A C G T A C G T C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AACAGCCT
NHAACBGYYV
A C G T A C G T C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AACAGCCT
--CAGCC-
C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AACAGCCT
CCAACTGCCA
A C G T A C G T C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AACAGCCT-
-BCAGACWA
C G T A T G C A G A T C C G T A A C T G A T G C A G T C C G A T A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A