Information for 1-GBAGAGAAACTA (Motif 1)

A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
Reverse Opposite:
A G C T C T G A A T C G A C G T C G A T A G C T G T A C C G A T A G T C C G A T T G A C A T G C
p-value:1e-9
log p-value:-2.136e+01
Information Content per bp:1.743
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif29.17%
Number of Background Sequences with motif364.8
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets67.4 +/- 22.1bp
Average Position of motif in Background52.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GBAGAGAAACTA
-NAGAGAAAGNA
A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GBAGAGAAACTA
GAAAGTGAAAGT-
A C G T A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GBAGAGAAACTA
GGAAGTGAAAST-
A C G T A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GBAGAGAAACTA
--ACTGAAACCA
A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GBAGAGAAACTA
--AGAGGAAGTG
A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GBAGAGAAACTA
GRAASTGAAAST-
A C G T A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GBAGAGAAACTA
CGGAAGTGAAAC--
A C G T A C G T A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GBAGAGAAACTA
--AGATAAGANN
A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GBAGAGAAACTA
AGGTGTGAAA---
A C G T A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GBAGAGAAACTA--
CGTATCGAAACCAAA
A C G T A T C G A C G T C G T A C T A G C G T A A C T G C T G A C G T A C G T A A T G C A G C T C T G A A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A