Information for 7-GTCGTCTTAC (Motif 22)

A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.576e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTCGTCTTAC
TAAGGCGTCTTG-
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTCGTCTTAC-
NNANTGGTGGTCTTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCGTCTTAC
GKVTCADRTTWC
A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCGTCTTAC--
TCCGTCGCTTAAAAG
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTCTTAC
GKMTCADRTTWC
A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCTTAC
NTTATTCGTCATNC
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCGTCTTAC---
--NNACTTACCTN
A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCTTAC-
VGGTVTCAGRTTWCA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T
T A G C T C A G T C A G C A G T T C A G A C G T A G T C T C G A C T A G C T A G A C G T A C G T C G A T G T A C G T C A

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCTTAC---
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTCGTCTTAC
NHGTCGTGAYDN
A C G T A C G T A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C