Information for 4-GCAGACTCGT (Motif 8)

A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A A C T G A C G T A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.187e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAGACTCGT
CCAGACRSVB
A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCAGACTCGT-----
TACGAGACTCCTCTAAC
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCAGACTCGT
BCAGACWA--
A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAGACTCGT
CCAGACAG--
A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCAGACTCGT
TGCTGACTCA-
A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAGACTCGT--
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZNF317/MA1593.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCAGACTCGT
TAACAGCAGACT---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCAGACTCGT----
ATGGAAAGTCGTAAAA
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGACTCGT-
TGCTGAGTCATC
A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T
G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C

Nfe2l2/MA0150.2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGACTCGT----
TGCTGAGTCATNNTG
A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G