p-value: | 1e-2 |
log p-value: | -6.883e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 4.17% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 20.0 +/- 0.0bp |
Average Position of motif in Background | 39.3 +/- 16.7bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GTCTTAGGTG--- -----AGGTGTCA |
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TBX5/MA0807.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GTCTTAGGTG--- -----AGGTGTGA |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTCTTAGGTG-- ---TTAAGTGGT |
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Nkx3-2/MA0122.3/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTCTTAGGTG----- --NTTAAGTGGTTNN |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCTTAGGTG------ NTNNTTAAGTGGNTNAN |
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TBX4/MA0806.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GTCTTAGGTG--- -----AGGTGTGA |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCTTAGGTG------ NTNNTTAAGTGGTTANN |
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Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTCTTAGGTG---- ----DAGGTGTBAA |
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TBX6/MA1567.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTCTTAGGTG---- ----GAGGTGTGAA |
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ISL2/MA0914.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTCTTAGGTG- ---TTAAGTGC |
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