Information for 4-CCATCTTGGA (Motif 7)

A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A
Reverse Opposite:
A C G T G T A C A G T C C G T A C G T A A C T G C T G A A C G T A C T G C T A G
p-value:1e-5
log p-value:-1.162e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif124.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets42.8 +/- 30.4bp
Average Position of motif in Background51.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----CCATCTTGGA
GCNGCCATCTTG--
A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CCATCTTGGA
GCCGCCATCTTG--
A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:3
Score:0.71
Offset:-9
Orientation:reverse strand
Alignment:---------CCATCTTGGA--
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCATCTTGGA
NNCATCTGNN-
A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCATCTTGGA-
NNACATCTGGNNN
A C G T A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A A C G T
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCATCTTGGA-
NNCCATCTGTNNN
A C G T A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NFIC/MA0161.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCATCTTGGA---
--TACTTGGCAGA
A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NEUROD1/MA1109.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCATCTTGGA
NNNCCATCTGTNN
A C G T A C G T A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

Stat5a/MA1624.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCATCTTGGA--
NNTTCTTGGAAN
A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A A C G T A C G T
C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCATCTTGGA--
CCNNACCATCTGGCCTN
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G C T A G T C A C G T A C G T A C T G A C T G G T C A A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T