Information for 9-GCCATCTGCT (Motif 18)

A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T
Reverse Opposite:
C G T A C T A G G A T C C G T A C A T G C G T A A C G T C T A G A C T G T G A C
p-value:1e-6
log p-value:-1.506e+01
Information Content per bp:1.814
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif351.9
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets42.6 +/- 24.0bp
Average Position of motif in Background51.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GCCATCTGCT
GCCATCTGTT
A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GCCATCTGCT-
NNNCCATCTGTNN
A C G T A C G T A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCCATCTGCT
ACCATCTGTT
A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GCCATCTGCT--
NNCCATCTGTNNN
A C G T A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

HAND2/MA1638.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCCATCTGCT
NNCATCTGNN
A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCCATCTGCT
RCCATMTGTT
A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GCCATCTGCT
SMCATCTGKH
A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCCATCTGCT--
GCCAGCTGBTNB
A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTGCT---
CCNNACCATCTGGCCTN
A C G T A C G T A C G T A C G T A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ATOH7/MA1468.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCCATCTGCT
GACATATGTT
A C T G T G A C A G T C G T C A G C A T G T A C A C G T C T A G A G T C C G A T
C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T