Information for 2-TGGWACAKAAGS (Motif 2)

A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A G C T G T A C A C G T A C T G A G C T C G T A G T A C A G T C G T C A
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.699
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif29.17%
Number of Background Sequences with motif660.7
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets42.1 +/- 27.5bp
Average Position of motif in Background51.1 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:TGGWACAKAAGS--
--AAACAGAAGCAG
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGGWACAKAAGS
CCAGGAACAG----
A C G T A C G T A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TGGWACAKAAGS-
---AACAKATGGY
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C A C G T
A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGGWACAKAAGS-
---NACAGTAGCN
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C A C G T
A C G T A C G T A C G T G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGWACAKAAGS--
-GGAACAGATGGCA
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C A C G T A C G T
A C G T C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGWACAKAAGS----
ATGTACAGTAGCAAAG
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGGWACAKAAGS
----ACATATGG
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

NEUROD1/MA1109.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGGWACAKAAGS---
--GGACAGATGGCAG
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGWACAKAAGS----
ATTTACAGTAGCAAAA
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGWACAKAAGS
-AAAACAAAGG-
A C G T C T A G A C T G C G A T C T G A A G T C C G T A C A T G C T G A C T G A A C T G A T G C
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T