Information for 21-CCTACTTGGC (Motif 35)

A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G A C T G
p-value:1e-2
log p-value:-6.883e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background72.4 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CCTACTTGGC---
--TACTTGGCAGA
A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTTGGC--
RGMCCTACTRTGTGC
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CCTACTTGGC---
----NTTGGCANN
A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCTACTTGGC---
---NNTTGGCANN
A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTACTTGGC
CACCTACTAT--
A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCTACTTGGC----
ACCCCTAATTAGCGGTG
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0089.1_Isx/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTACTTGGC---
ACNNCTAATTAGNNNN
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTACTTGGC--
-NNACTTGCCTT
A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTACTTGGC
-NTAATTGG-
A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T

GBX1/MA0889.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTACTTGGC
GCTAATTAGN
A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C
T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T