Information for 21-AGCAAACGGC (Motif 29)

C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.494e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background48.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCAAACGGC--
--NHAACBGYYV
C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCAAACGGC--
TTTGCACACGGCAC
A C G T A C G T C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCAAACGGC--
--CCAACTGCCA
C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGCAAACGGC--
NNTTTGCACACGGCCC
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGCAAACGGC-
---YAACBGCC
C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCAAACGGC--
AGGAAACAGCTG
C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

MSGN1/MA1524.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAACGGC-
NNACATATGGCN
A C G T C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T
A T C G T C A G T G C A A T G C T C G A G C A T C G T A A G C T A T C G T A C G A G T C T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCAAACGGC-
-CCAGACRSVB
C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCAAACGGC
AACAGATGGC
C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAAACGGC--
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T