Information for 14-TGGCCTCTCA (Motif 20)

A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C G T A A C T G A C T G A G T C A G T C C G T A
p-value:1e-2
log p-value:-6.685e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif35.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background46.2 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCA
KGGCCYCWTD
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGGCCTCTCA--
-AGCCACTCAAG
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCA
TGACCTYA--
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCA
TGACCYCT--
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGGCCTCTCA-
-AASCACTCAA
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGCCTCTCA----
TAACCACTCAAGAA
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCA--
TGACCTYTGVMC
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

Plagl1/MA1615.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCTCTCA-
NNTGGCCCCAGNN
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGCCTCTCA--
TGACCYYTGVYN
A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCCTCTCA--
NNNNTTGACCCCTNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C