Information for 11-AGAATCCCCG (Motif 14)

C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.187e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background43.5 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.2/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGAATCCCCG---
CAAATCCCCACTT
C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

RELB/MA1117.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGAATCCCCG-
GAATTCCCCGG
C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G A C G T
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGAATCCCCG
GGGGGAATCCCC-
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGAATCCCCG
AGGGGAATCCCCT
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PITX2/MA1547.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAATCCCCG
ATAATCCC--
C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G
G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AGAATCCCCG-
GNNAGCTAATCCCCCN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGAATCCCCG---
NTAGTTAATCCCCTTAN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGAATCCCCG
AGGGGAATCCCCT
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGAATCCCCG---
AGGCTAATCCCCAANG
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGAATCCCCG---
ATAGTTAATCCCCCTCA
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A