Information for 1-TGCTAGTA (Motif 7)

A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A
Reverse Opposite:
G A C T C T G A A G T C A C G T C T G A A C T G G T A C C G T A
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.802
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif21.54%
Number of Background Sequences with motif1699.6
Percentage of Background Sequences with motif3.57%
Average Position of motif in Targets47.5 +/- 22.4bp
Average Position of motif in Background49.6 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTAGTA--
NCNTTTGTTATTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TGCTAGTA-
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGTA-----
ACTTGCTACCTACACC
A C G T A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCTAGTA
TATGCAAAT-
A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCTAGTA--
TATGCWAATBAV
A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGTA-----
ACATGCTACCTAATAC
A C G T A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCTAGTA----
NNNNTGCCAGTGATTG
A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGTA----
KGTTGCTAGGMAACA
A C G T A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCTAGTA-
CATGCGGGTAC
A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCTAGTA--
WATGCAAATGAG
A C G T A C G T A C G T A C T G T A G C A G C T C G T A T C A G G A C T C T G A A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G