p-value: | 1e-5 |
log p-value: | -1.244e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 30.0 |
Percentage of Target Sequences with motif | 0.41% |
Number of Background Sequences with motif | 66.9 |
Percentage of Background Sequences with motif | 0.16% |
Average Position of motif in Targets | 52.4 +/- 32.5bp |
Average Position of motif in Background | 43.8 +/- 25.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TATTGAGA TATTGAYY |
|
|
|
POU6F1(var.2)/MA1549.1/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TATTGAGA- ATAATGAGGT |
|
|
|
PB0197.1_Zfp105_2/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TATTGAGA--- NAAANTTATTGAANCAN |
|
|
|
Arid5a/MA0602.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TATTGAGA-- CTAATATTGCTAAA |
|
|
|
PB0002.1_Arid5a_1/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TATTGAGA-- CTAATATTGCTAAA |
|
|
|
PH0151.1_Pou6f1_1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TATTGAGA---- GACGATAATGAGCTTGC |
|
|
|
PH0152.1_Pou6f1_2/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TATTGAGA---- AAACATAATGAGGTTGC |
|
|
|
POU6F2/MA0793.1/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TATTGAGA- NTAATGAGCT |
|
|
|
PB0139.1_Irf5_2/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TATTGAGA----- TTGACCGAGAATTCC |
|
|
|
FOXB1/MA0845.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TATTGAGA-- ATATTTACATA |
|
|
|