Information for 1-TTHGTGACGA (Motif 1)

A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A G T C C G T A A G T C C A G T C G T A C G T A
p-value:1e-10
log p-value:-2.305e+01
Information Content per bp:1.935
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.3 +/- 31.2bp
Average Position of motif in Background64.3 +/- 41.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTHGTGACGA-
---ATGACGTA
A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTHGTGACGA
NHGTCGTGAYDN
A C G T A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTHGTGACGA-----
-GAATGACGAATAAC
A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTHGTGACGA
----TGACGT
A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTHGTGACGA
-NCGTGACN-
A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTHGTGACGA---
---ATGACGTAAC
A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A T C G G T C A A G T C C A T G G A C T T G C A C G T A G A T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTHGTGACGA-
NNAATTAGTCACGGT
A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

HOXA9/MA0594.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTHGTGACGA-
-NNTTTACGAC
A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T
A C G T A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTHGTGACGA---
CTACTTGGATACGGAAT
A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTHGTGACGA
RGTTAGTGCCCY
A C G T A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A A G T C A C T G C G T A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T