Information for 2-CAGGAGCYCRMG (Motif 2)

G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
Reverse Opposite:
A T G C A C T G A G T C A C T G T C A G C T A G A T G C C A G T A G T C A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.720
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif8.68%
Number of Background Sequences with motif746.0
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets43.9 +/- 25.6bp
Average Position of motif in Background50.2 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4/MA0830.2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CAGGAGCYCRMG
NNGGCAGGTGCNN---
A C G T A C G T A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CAGGAGCYCRMG
SDGCAGGTGCNS---
A C G T A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CAGGAGCYCRMG
NNGACAGGTGCNN---
A C G T A C G T A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAGCYCRMG
NNCAGGTGNN----
A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CAGGAGCYCRMG
NNGGCAGGTGCNN---
A C G T A C G T A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G A C G T A C G T A C G T

ZNF135/MA1587.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGGAGCYCRMG-
TCAGGAGGTCGAGG
A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G A C G T
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGGAGCYCRMG
GGCAGGTGCA----
A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T A C G T A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAGGAGCYCRMG
NNGACAGGTGCNN---
A C G T A C G T A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G A C G T A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGGAGCYCRMG
NNGCAGGTGNN----
A C G T A C G T A C G T G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGGAGCYCRMG
-CGGAGC-----
G T A C G T C A A C T G A C T G G T C A A T C G A G T C A G T C G T A C T C A G T G A C A T C G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T