Information for 2-ACTTAGTGAT (Motif 2)

C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C T G A C G T
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAGTGAT-----
NNTTTATTGATTTTTT
A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACTTAGTGAT----
NAAANTTATTGAANCAN
A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTAGTGAT
ACCACTTAA----
A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACTTAGTGAT
GCACTTAA----
A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACTTAGTGAT-
GTACTAATTAGTGGCG
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACTTAGTGAT-
AGCGCTAATTAGCGATT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAGTGAT----
NNANTGATTGATNTTN
A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAGTGAT
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAGTGAT---
NNAATTAGTCACGGT
A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Nkx3-2/MA0122.3/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACTTAGTGAT
ATAACCACTTAAA---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T A C G T A C G T