p-value: | 1e-3 |
log p-value: | -7.494e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 7.69% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 81.0 +/- 0.0bp |
Average Position of motif in Background | 56.5 +/- 15.7bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HOXD3/MA0912.2/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGAAATTAG --GTAATTAG |
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PH0039.1_Mnx1/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGAAATTAG----- GTACTAATTAGTGGCG |
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PRDM1/MA0508.3/Jaspar
Match Rank: | 3 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGAAATTAG NAGAGAAAGNA- |
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GBX2/MA0890.1/Jaspar
Match Rank: | 4 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGAAATTAG- -ACCAATTAGC |
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PH0107.1_Msx2/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGAAATTAG---- GAAGACCAATTAGCGCT |
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TLX2/MA1577.1/Jaspar
Match Rank: | 6 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAGAAATTAG --CTAATTAG |
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HOXB7/MA1501.1/Jaspar
Match Rank: | 7 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGAAATTAG- -GGTAATTAAC |
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HOXB3/MA0903.1/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGAAATTAG- -ACTAATTAGC |
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GBX1/MA0889.1/Jaspar
Match Rank: | 9 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGAAATTAG- -ACTAATTAGC |
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VSX1/MA0725.1/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGAAATTAG --NTAATTAG |
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