Information for 3-RTATTKCWYA (Motif 7)

C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A
Reverse Opposite:
A C G T C T G A C G T A A C T G G T A C C G T A G T C A A G C T C G T A A G T C
p-value:1e-6
log p-value:-1.593e+01
Information Content per bp:1.830
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif17.46%
Number of Background Sequences with motif1043.1
Percentage of Background Sequences with motif2.19%
Average Position of motif in Targets46.9 +/- 21.3bp
Average Position of motif in Background48.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.4/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:RTATTKCWYA----
TTATTGCACAATAT
C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T A C G T A C G T A C G T
C G A T C A G T T C G A G C A T C A G T C A T G G A T C C T G A G A T C G T C A C G T A A G C T G C T A G C A T

CEBPD/MA0836.2/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:RTATTKCWYA----
-TATTGCACAATAT
C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T A C G T A C G T A C G T
A C G T C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-RTATTKCWYA-
GGGATTGCATNN
A C G T C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

NFIL3/MA0025.2/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:RTATTKCWYA---
NNATTGCATAANN
C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T A C G T A C G T
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:RTATTKCWYA-
--ATTGCATAA
C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T
A C G T A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-RTATTKCWYA---
NNTTTTTCTTATNT
A C G T C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T A C G T A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:RTATTKCWYA--
--ATTGCGCAAC
C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T A C G T
A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

HLF/MA0043.3/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RTATTKCWYA----
NNGTTGCATAACNN
C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A A C G T A C G T A C G T A C G T
G C A T C A G T T C A G G A C T C A G T C T A G G A T C T C G A G A C T G T C A C G T A A G T C G T C A G C T A

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------RTATTKCWYA
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

CDX2/MA0465.2/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---RTATTKCWYA
NTTTTATTGCNN-
A C G T A C G T A C G T C T A G A C G T C T G A A C G T A C G T A C T G A G T C G C A T A G C T G T C A
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T A C G T