Information for 4-CAGCCCTGTC (Motif 6)

A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C
Reverse Opposite:
A C T G C G T A A G T C C G T A C T A G A T C G C T A G A T G C A C G T A C T G
p-value:1e-5
log p-value:-1.302e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif9.80%
Number of Background Sequences with motif188.1
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets63.3 +/- 25.7bp
Average Position of motif in Background51.6 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CAGCCCTGTC--
----CCTGTCAA
A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CAGCCCTGTC--
----GCTGTCAA
A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGCCCTGTC--
-----NTGTCAN
A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

POL002.1_INR/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGCCCTGTC
TCAGTCTT---
A C G T A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAGCCCTGTC
----GCTGTG
A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCCCTGTC
CAGCC-----
A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGCCCTGTC
--GCATTGTN
A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C
A C G T A C G T A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGCCCTGTC---
-----YTGWCADY
A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCCCTGTC--
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCCTGTC
CNAGGCCT---
A C G T A G T C C G T A A T C G A G T C T A G C A G T C A C G T A C T G A C G T G T A C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T