Information for 24-GGAGCAAACGGC (Motif 34)

A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C
p-value:1e-3
log p-value:-7.769e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAAACGGC
CGGAGC-------
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGAGCAAACGGC--
----NHAACBGYYV
A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAAACGGC-
TGGGGCAAAGGTCA
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAGCAAACGGC-
TAGGGCAAAGGTCA
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGAGCAAACGGC-
GTAGGGCAAAGGTCA
A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAAACGGC
GGGAGGACNG---
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGAGCAAACGGC--
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGCAAACGGC--
TTTGCACACGGCAC
A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCAAACGGC--
NNTTTGCACACGGCCC
A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGAGCAAACGGC--
----CCAACTGCCA
A C T G A C T G C G T A A C T G A G T C C G T A C G T A C G T A A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A