p-value: | 1e-5 |
log p-value: | -1.287e+01 |
Information Content per bp: | 1.651 |
Number of Target Sequences with motif | 89.0 |
Percentage of Target Sequences with motif | 3.08% |
Number of Background Sequences with motif | 848.3 |
Percentage of Background Sequences with motif | 1.83% |
Average Position of motif in Targets | 48.5 +/- 26.8bp |
Average Position of motif in Background | 50.3 +/- 31.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCCAGGCA TTGCCAAG-- |
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HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGCCAGGCA -TGCCAGCB- |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGCCAGGCA- SCTGTCAVTCAV |
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NFIC/MA0161.2/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGCCAGGCA NNTGCCAAGNN |
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Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGCCAGGCA CTTCCNGGAA |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGCCAGGCA- AGGTGNCAGACAG |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCAGGCA AGGTGHCAGACA |
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Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCCAGGCA-- NNCTTCCNGGAAGN |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGCCAGGCA- NCTGTCAATCAN |
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NFIX/MA0671.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGCCAGGCA CGTGCCAAG-- |
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