Information for 3-GGCGAAGATC (Motif 7)

A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A C G T A G T C A C T G A G T C A G T C
p-value:1e-3
log p-value:-8.251e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif86.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets46.0 +/- 34.0bp
Average Position of motif in Background47.5 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCGAAGATC----
GGGCGATGACCAYTC
A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGCGAAGATC
--NGAAGC--
A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGCGAAGATC--
---GAAGATGTT
A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCGAAGATC-
TGGGGAAGGGCM
A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCGAAGATC-
TAGGGCAAAGGTCA
A C G T A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

ZNF682/MA1599.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCGAAGATC----
CGGGCCAAGCCCCTAT
A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCGAAGATC-
TGGGGCAAAGGTCA
A C G T A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGCGAAGATC
RGKGGGCGGAGC--
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGCGAAGATC-
VNAGGKCAAAGGTCA
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCGAAGATC--
----AAGGTCAC
A C T G A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C