Information for 24-AACTAGAGAC (Motif 21)

C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A G T C A C G T C G T A A C T G A C G T A C G T
p-value:1e-5
log p-value:-1.162e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 28.8bp
Average Position of motif in Background18.5 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AACTAGAGAC--
GGTTAGAGACCT
C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACTAGAGAC
GWAAYHTGAKMC
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACTAGAGAC--
TGWAAYCTGABACCB
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AACTAGAGAC
GTTAACTAGN---
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACTAGAGAC-----
CTACTTGGATACGGAAT
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AACTAGAGAC-
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACTAGAGAC--
GTCCTTGAGCCCG
A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACTAGAGAC
GWAAYHTGABMC
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Smad4/MA1153.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AACTAGAGAC
-TCTAGACA-
C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AACTAGAGAC
TTAATTAG----
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C T G C G T A A G T C
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T