p-value: | 1e-11 |
log p-value: | -2.572e+01 |
Information Content per bp: | 1.722 |
Number of Target Sequences with motif | 16.0 |
Percentage of Target Sequences with motif | 0.21% |
Number of Background Sequences with motif | 8.9 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 51.1 +/- 28.1bp |
Average Position of motif in Background | 53.3 +/- 28.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGACCTACAGTC------- TGACCTAAAGTAACCTCTG |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTACAGTC- TTGACCTANTTATN |
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RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCTACAGTC NNHYTGACCTAGWTT- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTACAGTC TGACCT------ |
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RORA/MA0071.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTACAGTC TGACCTTGAT-- |
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NR1D1/MA1531.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACCTACAGTC-- NTGACCTACTGACCC |
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ZKSCAN1/MA1585.1/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGACCTACAGTC -CACCTACTAT- |
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RORC/MA1151.1/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTACAGTC TGACCTANTTAN |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTACAGTC---- TGACCTNTAGTAACCC |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCTACAGTC TGACCTARTT-- |
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