Information for 20-GGTGAGAAAG (Motif 21)

A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.502e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif42.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background38.9 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGTGAGAAAG--
-NAGAGAAAGNA
A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G A C G T A C G T
A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGTGAGAAAG
AGGTGTGAAA-
A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T

TBX18/MA1565.1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGTGAGAAAG
GGAGGTGTGAAA-
A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGTGAGAAAG
AGGTGTGAAA-
A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGTGAGAAAG--
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGTGAGAAAG
AAGGTGTGAAA-
A C G T A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTGAGAAAG
ATGTGGGAAA-
A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGTGAGAAAG-
AAGGTGTGAAAAT
A C G T A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTGAGAAAG
AGGTGTGAAM-
A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAGAAAG
AGGTGTTAAT-
A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T