Information for 9-GCGCCMYC (Motif 6)

T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C
Reverse Opposite:
C A T G T C G A C A G T C T A G T C A G T G A C T C A G A T G C
p-value:1e-58
log p-value:-1.342e+02
Information Content per bp:1.517
Number of Target Sequences with motif719.0
Percentage of Target Sequences with motif9.24%
Number of Background Sequences with motif2023.7
Percentage of Background Sequences with motif4.84%
Average Position of motif in Targets49.9 +/- 24.7bp
Average Position of motif in Background49.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCMYC-
CGCCGCCATNN
A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T

CTCFL/MA1102.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCGCCMYC----
GCGCCCCCTGNN
T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T A C G T A C G T
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCGCCMYC-------
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

E2F2/MA0864.2/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GCGCCMYC--
GTTTTGGCGCCATTTC
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T
T C A G C G A T C G A T C G A T C G A T T A C G T A C G G T A C C T A G T A G C T A G C G T C A G C A T C G A T G C A T A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCMYC--
ANCGCGCGCCCTTNN
A C G T A C G T A C G T A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCMYC--
NNNGGGGCGCCCCCNN
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCGCCMYC-----
GGTCCCGCCCCCTTCTC
A C G T A C G T A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGCCMYC
AGCGCGCC---
A C G T A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GCGCCMYC---
AGCTCGGCGCCAAAAGC
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCMYC---------
TAGCGCCCCCTGGTGGCCA
A C G T A C G T T A C G A G T C A C T G A G T C G A T C G T C A A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A