Information for 2-TTAGTTGG (Motif 21)

A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A G T C A C G T C G T A C G T A
p-value:1e-2
log p-value:-5.437e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif122.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background54.9 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LHX2/MA0700.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTGG--
NNTAATTGGNN
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T

MSX2/MA0708.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTAGTTGG
NTAATTGG
A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

Msx3/MA0709.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTAGTTGG
NTAATTGN
A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

MYB/MA0100.3/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTGG-
NNCAGTTGNN
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGG-----
NNNTTAATTGGTTTTT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PH0108.1_Msx3/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGG-----
NNNTTAATTGGTTTTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

RAX/MA0718.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTGG-
NTTAATTGNN
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T
C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTGG-----
GNNTTAATTGGTTGTT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAGTTGG
NTAATTGG
A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

LHX9/MA0701.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTAGTTGG
NTAATTAG
A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C T G
A G C T A G C T G T C A C G T A A C G T C A G T C T G A T C A G