Information for 4-RYTCAKAKTGAR (Motif 4)

C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A G T C A A C G T G T A C A C G T A C T G C G T A T C A G A G T C
p-value:1e-6
log p-value:-1.567e+01
Information Content per bp:1.838
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.7 +/- 6.5bp
Average Position of motif in Background54.9 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-RYTCAKAKTGAR--
BAGTCATANTGAAAG
A C G T C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--RYTCAKAKTGAR----
WNAGTCADAVTGAAACTN
A C G T A C G T C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RYTCAKAKTGAR-----
AAACATAATGAGGTTGC
C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:RYTCAKAKTGAR-
-----TATTGAYY
C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RYTCAKAKTGAR---
GGTCANNGTGACCTN
C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RYTCAKAKTGAR---
CAGGTCACCGTGACCTT
A C G T A C G T C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:RYTCAKAKTGAR--
----ATAATGAGGT
C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RYTCAKAKTGAR---
-CTAATATTGCTAAA
C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RYTCAKAKTGAR---
-CTAATATTGCTAAA
C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

POL002.1_INR/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:RYTCAKAKTGAR
---NNNANTGA-
C T A G A G C T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A C T A G
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T