Information for 23-CTCGTGCATA (Motif 36)

A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C T G
p-value:1e-2
log p-value:-6.883e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background56.2 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOHLH2/MA1560.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCGTGCATA
CGCACGTGCA--
A C G T A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCGTGCATA
NHGTCGTGAYDN
A C G T A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCGTGCATA
NGKCACGTGM---
A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
T C A G T A C G C A G T T G A C C G T A A G T C T C A G G C A T A C T G G T A C A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTCGTGCATA
ACCACGTGCC--
A C G T A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCGTGCATA
ACACGTGC---
A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCGTGCATA
NGKCACGTGM---
A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCGTGCATA---
---ATGMATATDC
A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCGTGCATA
CACGTGBN--
A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T

MYC/MA0147.3/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCGTGCATA
GGCCACGTGCCC-
A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCGTGCATA
NACACGTGCN--
A C G T A C G T A G T C A C G T A G T C A C T G A C G T A C T G A G T C C G T A A C G T C G T A
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T