Information for 5-CCRARCGA (Motif 7)

A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G C T A C G T A G C T T C A G A T C G
p-value:1e-3
log p-value:-8.768e+00
Information Content per bp:1.840
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif7.84%
Number of Background Sequences with motif243.6
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets57.3 +/- 21.5bp
Average Position of motif in Background46.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL1/MA0877.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCRARCGA
CTAAACGG
A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCRARCGA------
NNTAAAAACGATGTTNT
A C G T A C G T A C G T A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

SOX12/MA1561.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCRARCGA--
ACCGAACAATG
A C G T A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T
G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCRARCGA-
GCTAAACGGT
A C G T A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Ebf2/MA1604.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCRARCGA--
TTCCCAAGGGACT
A C G T A C G T A C G T A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCRARCGA---
-TAATCGATAA
A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

EBF3/MA1637.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCRARCGA--
TTCCCAAGGGAAT
A C G T A C G T A C G T A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCRARCGA---
-TAATCGATAA
A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCRARCGA-------
TTGACCGAGAATTCC
A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCRARCGA---------
CTGATCGAAACCAAAGT
A T G C A G T C C T G A C G T A C T G A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T