Information for 14-GCACTTACCG (Motif 19)

A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCACTTACCG
GCACTTAA--
A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCACTTACCG
AAGCACTTAA--
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCACTTACCG-
NNACTTACCTN
A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCACTTACCG
ACCACTTAA--
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCACTTACCG
ATAACCACTTAAA-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCACTTACCG--
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCACTTACCG
ACCACTTGAA-
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCACTTACCG
RGGGCACTAACY-
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCACTTACCG--
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

ELF1/MA0473.3/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCACTTACCG---
NNCACTTCCTGNNN
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A T G C A G T C A G T C G C T A A G T C G C A T A C G T G A T C T A G C A C G T A T C G A C G T G A C T G A C T