Information for 25-AAAGTGACCT (Motif 23)

C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.320e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 33.5bp
Average Position of motif in Background44.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:AAAGTGACCT-
---GTGACCTT
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:AAAGTGACCT--
----TGACCTYA
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:AAAGTGACCT
----TGACCT
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR2C1/MA1535.1/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AAAGTGACCT--
---NTGACCTCN
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AAAGTGACCT---
---NTGACCTTGA
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:AAAGTGACCT----
----TGACCTTGAT
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:7
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AAAGTGACCT-----
---GTGACCTTGRVN
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:8
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AAAGTGACCT-
---NTGACCTN
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AAAGTGACCT------
----TGACCTYTGVMC
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

NR2F2/MA1111.1/Jaspar

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AAAGTGACCT---
--NNTGACCTTTN
C G T A C G T A C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G