Preview

Pasquier_etal_2023_zenodo
- .DS_Store
  
  14.3 kB
- .gitignore
  
  248 Bytes
- .vscode
  - settings.json
    
    2 Bytes
- Manifest.toml
  
  58.6 kB
- O2_gdz_obs_91x180x24.mat
  
  1.5 MB
- Project.toml
  
  507 Bytes
- README.md
  
  412 Bytes
- data
  - .DS_Store
    
    6.1 kB
  - ACCESS_basins_1p3.mat
    
    1.6 MB
  - ACCESS_files_metadata.csv
    
    2.9 kB
  - ACCESS_grid.mat
    
    75.4 MB
  - ACCESS_matrix_builder
    - .DS_Store
      
      6.1 kB
    - output
      - .DS_Store
        
        6.1 kB
      - value.ACCESS_1990.MLDmax.kVML0.1_kVdeep1e-05_kH500.txt
        
        363.2 MB
    - tmp
      - iindex.advect.txt
        
        237.1 MB
      - jindex.advect.txt
        
        237.1 MB
      - mld.nc
        
        51.9 MB
  - ACCESS_tracers
    - .DS_Store
      
      6.1 kB
    - ACCESS_MOD_historical_1990s.mat
      
      45.6 MB
  - Cfields_preind_2002_v7_Kwx1p2.mat
    
    14.5 MB
  - GLODAPv2.2016b_MappedClimatologies
    - .DS_Store
      
      6.1 kB
  - GSW
    - .DS_Store
      
      6.1 kB
  - Kw660_ocim2_v2.mat
    
    293.6 kB
  - MLD_maxp_ocim2.mat
    
    76.1 kB
  - O2obs_91x180x24.mat
    
    1.6 MB
  - OCIM2_CTL_He.mat
    
    160.9 MB
  - OCIM2_PAR_1990s_0fill.mat
    
    265.0 kB
  - OCIM2_PAR_1990s_ZAVGfill.mat
    
    268.9 kB
  - OCIM2_PAR_from_ACCESS_1990s_ZAVG-filled.mat
    
    268.9 kB
  - ReadMe.md
    
    1.6 kB
  - WOA18
    - .DS_Store
      
      6.1 kB
  - alk_gd_obs_91x180x24.mat
    
    1.4 MB
  - basins_NEW.mat
    
    142.2 kB
  - basins_NEW_struct.mat
    
    11.0 kB
  - cbpm_npp_ocim2grid.mat
    
    77.6 kB
  - chl_gsm_ocim2grid_filledmin.mat
    
    75.3 kB
  - coarse_stuff.mat
    
    31.1 MB
  - default_parameters.csv
    
    2.7 kB
  - default_parameters.xlsx
    
    13.1 kB
  - dic_gd_obs_91x180x24.mat
    
    1.5 MB
  - po4obs_91x180x24.mat
    
    1.6 MB
  - sio4obs_91x180x24.mat
    
    1.6 MB
  - vgpm_npp_ocim2grid_filledmin.mat
    
    74.7 kB
  - zeu_gsm_ocim2grid_filledmin.mat
    
    74.7 kB
- output
  - .DS_Store
    
    10.2 kB
  - DeltaSO_PCO2model_a6a30ce5_run657_f18839e5_run662.mat
    
    298.0 MB
  - DeltaSO_PCO2model_a6a30ce5_run657_f18839e5_run662_Cex.mat
    
    10.1 MB
  - DeltaSO_PCO2model_a6a30ce5_run657_f18839e5_run662_Cpump.mat
    
    63.1 MB
  - DeltaSO_PCO2model_a6a30ce5_run657_f18839e5_run662_Ppump.mat
    
    58.0 MB
  - DeltaSO_PCO2model_a6a30ce5_run657_f18839e5_run662_Ppump_export_vs_tau.mat
    
    74.7 MB
  - DeltaSO_PCO2model_e6a97e83_run653_d3e0c495_run663.mat
    
    85.6 MB
  - DeltaSO_PCO2model_e6a97e83_run653_d3e0c495_run663_Cex.mat
    
    1.8 MB
  - DeltaSO_PCO2model_e6a97e83_run653_d3e0c495_run663_Cpump.mat
    
    18.1 MB
  - DeltaSO_PCO2model_e6a97e83_run653_d3e0c495_run663_Ppump.mat
    
    16.7 MB
  - DeltaSO_PCO2model_e6a97e83_run653_d3e0c495_run663_Ppump_export_vs_tau.mat
    
    21.4 MB
  - PBS
    - ReadMe.md
      
      68 Bytes
  - PCO2model_44642c66_run666.mat
    
    240.3 MB
  - PCO2model_44642c66_run666_Cex.mat
    
    10.1 MB
  - PCO2model_44642c66_run666_Cpump.mat
    
    63.3 MB
  - PCO2model_44642c66_run666_Ppump.mat
    
    58.1 MB
  - PCO2model_44642c66_run666_Ppump_export_vs_tau.mat
    
    74.4 MB
  - PCO2model_44642c66_run666_parameters.csv
    
    1.2 kB
  - PCO2model_a6a30ce5_run657.mat
    
    240.3 MB
  - PCO2model_a6a30ce5_run657_Cex.mat
    
    10.1 MB
  - PCO2model_a6a30ce5_run657_Cpump.mat
    
    63.2 MB
  - PCO2model_a6a30ce5_run657_Ppump.mat
    
    58.1 MB
  - PCO2model_a6a30ce5_run657_Ppump_export_vs_tau.mat
    
    74.6 MB
  - PCO2model_a6a30ce5_run657_parameters.csv
    
    1.2 kB
  - PCO2model_e6a97e83_run653.mat
    
    69.0 MB
  - PCO2model_e6a97e83_run653_Cex.mat
    
    1.8 MB
  - PCO2model_e6a97e83_run653_Cpump.mat
    
    18.1 MB
  - PCO2model_e6a97e83_run653_Ppump.mat
    
    16.7 MB
  - PCO2model_e6a97e83_run653_Ppump_export_vs_tau.mat
    
    21.3 MB
  - PCO2model_e6a97e83_run653_parameters.csv
    
    1.2 kB
  - PCmodel_8185ded3_run698.mat
    
    232.9 MB
  - PCmodel_8185ded3_run698_Cex.mat
    
    10.1 MB
  - PCmodel_8185ded3_run698_Cpump.mat
    
    63.2 MB
  - PCmodel_8185ded3_run698_Ppump.mat
    
    58.0 MB
  - PCmodel_8185ded3_run698_Ppump_export_vs_tau.mat
    
    74.6 MB
  - PCmodel_8185ded3_run698_parameters.csv
    
    1.2 kB
  - PCmodel_f9b8e646_run696.mat
    
    67.0 MB
  - PCmodel_f9b8e646_run696_Cex.mat
    
    1.8 MB
  - PCmodel_f9b8e646_run696_Cpump.mat
    
    18.1 MB
  - PCmodel_f9b8e646_run696_Ppump.mat
    
    16.7 MB
  - PCmodel_f9b8e646_run696_Ppump_export_vs_tau.mat
    
    21.3 MB
  - PCmodel_f9b8e646_run696_parameters.csv
    
    1.2 kB
  - ReadMe.md
    
    37 Bytes
  - figures
    - .DS_Store
      
      163.8 kB
    - paper1
      - .DS_Store
        
        6.1 kB
  - param_saves
    - ReadMe.md
      
      32 Bytes
  - run_history.csv
    
    106 Bytes
  - run_history.xlsx
    
    2.7 MB
  - run_history_commented.xlsx
    
    94.6 kB
  - state_saves
    - ReadMe.md
      
      33 Bytes
- src
  - .DS_Store
    
    12.3 kB
  - F_PCO2.m
    
    19.7 kB
  - PCO2_setup.m
    
    9.9 kB
  - ReadMe.md
    
    32 Bytes
  - basins
    - make_basins.m
      
      2.3 kB
  - biogeochemistry
    - C_uptake.m
      
      743 Bytes
    - P_uptake
      - P_uptake.m
        
        1.4 kB
      - P_uptake_PH17xMARBL.m
        
        3.3 kB
    - UC_by_mechanism_from_vars.m
      
      248 Bytes
    - carbonate_system
      - CO2sys
        
        CO2SYS.m
        
        99.8 kB
        
        CalculatepHfromTATC_noglobals.m
        
        3.3 kB
        
        derivnum.m
        
        20.0 kB
        
        phresidual.m
        
        1.7 kB
      - get_CO2SYS_output_for_plotting.m
        
        1.5 kB
      - myCO2SYS.m
        
        2.6 kB
    - dissolution.m
      
      311 Bytes
    - f_alkalinty.m
      
      1.7 kB
    - make_sigma.m
      
      298 Bytes
    - make_sigmas.m
      
      654 Bytes
    - parameter_setup.m
      
      4.4 kB
    - remineralization.m
      
      934 Bytes
    - respiration.m
      
      1.7 kB
    - stoichiometry.m
      
      968 Bytes
  - circulations
    - ACCESS
      - PAR_from_rsds.m
        
        354 Bytes
      - build_ACCESS_circ.m
        
        4.3 kB
      - build_ACCESS_grd.m
        
        2.3 kB
      - extract_decade_from_string.m
        
        242 Bytes
      - load_ACCESS_circ.m
        
        3.2 kB
      - load_ACCESS_grid.m
        
        944 Bytes
      - load_ACCESS_tracer_fields.m
        
        2.8 kB
      - parse_ACCESS_circulation_name.m
        
        2.0 kB
    - OCIM2
      - load_OCIM2_circ.m
        
        466 Bytes
      - load_OCIM2_grid.m
        
        367 Bytes
    - append_circ_name.m
      
      320 Bytes
    - append_extra_name.m
      
      280 Bytes
    - build_dictionary_of_circulation_sizes.m
      
      404 Bytes
    - circulation_name_and_hash.m
      
      107 Bytes
    - coarsen_circulation.m
      
      931 Bytes
    - extract_digit.m
      
      938 Bytes
    - load_circulation.m
      
      2.8 kB
    - lump_and_spray.m
      
      4.7 kB
    - parse_coarsened_circulation_name.m
      
      309 Bytes
    - readable_circ_name.m
      
      2.6 kB
    - readable_experiment.m
      
      189 Bytes
    - readable_model_circ_run_name.m
      
      473 Bytes
    - readable_model_name.m
      
      952 Bytes
    - readable_run_num.m
      
      519 Bytes
    - size_to_circulation.m
      
      886 Bytes
  - diagnostics
    - Cexport_production.m
      
      4.1 kB
    - Cpump_partition_v2.m
      
      3.9 kB
    - Ppump_export_vs_tau.m
      
      2.1 kB
    - Ppump_partition.m
      
      2.9 kB
    - Ppump_partition_v2.m
      
      3.7 kB
    - export_production.m
      
      3.7 kB
    - regpre_partition.m
      
      997 Bytes
  - experiments
    - DeltaSO.m
      
      2.9 kB
    - Run_PCO2_model_in_ACCESS_2x2L50.sh
      
      533 Bytes
    - Run_PCO2model_ACCESS2x2L50.sh
      
      453 Bytes
    - Run_PC_model_in_ACCESS_1990_2x2L50.sh
      
      537 Bytes
    - Run_PCmodel_ACCESS2x2L50.sh
      
      446 Bytes
    - Run_same_model_in_ACCESS_2x2.m
      
      5.0 kB
    - Run_same_model_in_ACCESS_2x2.sh
      
      450 Bytes
    - SOperturbation_PCO2_ACCESS2x2.sh
      
      471 Bytes
    - SOperturbation_PCO2_OCIM2x2.sh
      
      454 Bytes
    - Swap_parameters_PCO2_OCIM2_2x2.sh
      
      515 Bytes
    - run_PCO2model_ACCESS2x2L50.m
      
      4.1 kB
    - run_PCmodel_ACCESS2x2L50.m
      
      4.0 kB
    - run_same_model_in_ACCESS.m
      
      4.9 kB
    - swap_circulation.m
      
      6.1 kB
    - swap_parameters.m
      
      5.7 kB
  - linearalgebra
    - blockbackslash.m
      
      1.3 kB
    - blockdecomposition.m
      
      459 Bytes
  - masks
    - caribbean_mask.m
      
      538 Bytes
    - caribbean_mask_ACCESS.m
      
      546 Bytes
    - caribbean_mask_OCIM2.m
      
      245 Bytes
    - gulf_of_mexico_mask.m
      
      553 Bytes
    - gulf_of_mexico_mask_ACCESS.m
      
      224 Bytes
    - gulf_of_mexico_mask_OCIM2.m
      
      250 Bytes
    - make_HCM2020_masks.m
      
      3.0 kB
    - mediterranean_mask.m
      
      550 Bytes
    - mediterranean_mask_ACCESS.m
      
      189 Bytes
    - mediterranean_mask_OCIM2.m
      
      180 Bytes
    - persian_sea_mask.m
      
      544 Bytes
    - persian_sea_mask_ACCESS.m
      
      148 Bytes
    - persian_sea_mask_OCIM2.m
      
      159 Bytes
    - red_sea_mask.m
      
      532 Bytes
    - red_sea_mask_ACCESS.m
      
      144 Bytes
    - red_sea_mask_OCIM2.m
      
      151 Bytes
    - sea_of_japan_mask.m
      
      547 Bytes
    - sea_of_japan_mask_ACCESS.m
      
      220 Bytes
    - sea_of_japan_mask_OCIM2.m
      
      173 Bytes
  - optimization
    - blocksteadystatesolve.m
      
      4.5 kB
    - meansquareerror.m
      
      207 Bytes
    - objective.m
      
      3.7 kB
    - objective_y.m
      
      1.2 kB
    - onehot.m
      
      156 Bytes
    - optimizablevec.m
      
      428 Bytes
    - optimize_PCO2model_ACCESS2x2L50.m
      
      5.4 kB
    - optimize_PCO2model_ACCESS2x2L50.sh
      
      463 Bytes
    - optimize_PCO2model_OCIM2x2.m
      
      5.4 kB
    - optimize_PCO2model_OCIM2x2.sh
      
      437 Bytes
    - optimize_PCmodel_ACCESS2x2L50.m
      
      5.3 kB
    - optimize_PCmodel_ACCESS2x2L50.sh
      
      457 Bytes
    - optimize_PCmodel_OCIM2x2.m
      
      5.2 kB
    - optimize_PCmodel_OCIM2x2.sh
      
      430 Bytes
    - solvesteadystate.m
      
      2.4 kB
    - solvesteadystateHC.m
      
      2.0 kB
    - weightedrootmeansquareerror.m
      
      174 Bytes
  - parameters
    - bijectors
      - dp2y_dp.m
        
        313 Bytes
      - dy2p_dy.m
        
        320 Bytes
      - p2y.m
        
        302 Bytes
      - y2p.m
        
        306 Bytes
    - default_parameters.m
      
      125 Bytes
    - dispuparametertable.m
      
      1.1 kB
    - finalizeparameters.m
      
      1.5 kB
    - fixparameter.m
      
      508 Bytes
    - freeparameter.m
      
      742 Bytes
    - parameter.m
      
      413 Bytes
    - paramtable2struct.m
      
      237 Bytes
    - read_parameter_table.m
      
      1.4 kB
    - read_parameter_tables.m
      
      2.0 kB
    - unpackuparameter.m
      
      1.6 kB
    - unpackuparametervector.m
      
      454 Bytes
    - uparameter.m
      
      434 Bytes
    - uparamtable2struct.m
      
      270 Bytes
  - particles
    - bottomdepthvec.m
      
      196 Bytes
    - buildIabove.m
      
      73 Bytes
    - buildIbelow.m
      
      333 Bytes
    - interpbottom.m
      
      1.0 kB
    - interptop.m
      
      749 Bytes
    - isseafloorvec.m
      
      248 Bytes
    - particle_flux_divergence_operator.m
      
      461 Bytes
    - topdepthvec.m
      
      69 Bytes
    - transportoperator.m
      
      2.0 kB
    - zcumsum.m
      
      147 Bytes
  - plotting
    - .DS_Store
      
      6.1 kB
    - basinprofiles.m
      
      399 Bytes
    - common_setup_allplots.m
      
      2.2 kB
    - common_setup_changeplots.m
      
      1.6 kB
    - defaultsubplotpositions.m
      
      1.7 kB
    - extend.m
      
      114 Bytes
    - extrapolate_nans_fast.m
      
      1.6 kB
    - fix_contourfcbar.m
      
      348 Bytes
    - flux_divergence_map.m
      
      2.8 kB
    - flux_divergence_zonal_integral.m
      
      2.1 kB
    - hidedecorations.m
      
      630 Bytes
    - hidexdecorations.m
      
      264 Bytes
    - hideydecorations.m
      
      265 Bytes
    - histwv.m
      
      916 Bytes
    - interactiveslices.m
      
      2.7 kB
    - intersection_fraction.m
      
      709 Bytes
    - isapprox.m
      
      107 Bytes
    - jointPDF.m
      
      1.2 kB
    - keeplinspaced.m
      
      295 Bytes
    - locate_from_jointPDF.m
      
      754 Bytes
    - locate_from_jointPDF2.m
      
      705 Bytes
    - mk2dcpdf.m
      
      809 Bytes
    - mycolorbar.m
      
      5.9 kB
    - myheatmap.m
      
      383 Bytes
    - mykde2d.m
      
      8.7 kB
    - nanpad.m
      
      90 Bytes
    - nice_lon_string.m
      
      217 Bytes
    - paper1
      - plot_paper1_Cex_and_SOpert.m
        
        7.8 kB
      - plot_paper1_Cpump_ZAVGs.m
        
        4.6 kB
      - plot_paper1_MLD.m
        
        2.7 kB
      - plot_paper1_MLD_vs_CMIP.m
        
        3.2 kB
      - plot_paper1_MLD_vs_Gadi.m
        
        3.1 kB
      - plot_paper1_O2pre_TOU.m
        
        2.8 kB
      - plot_paper1_O2sinks_ZAVGs.m
        
        5.2 kB
      - plot_paper1_PCO2_joint_PDFs.m
        
        2.1 kB
      - plot_paper1_POCflux_Cex.m
        
        6.1 kB
      - plot_paper1_POCflux_Cex2.m
        
        6.9 kB
      - plot_paper1_Pstar.m
        
        3.3 kB
      - plot_paper1_Pstar2.m
        
        5.8 kB
      - plot_paper1_Pstar3.m
        
        10.5 kB
      - plot_paper1_Pstar3_perturbed.m
        
        9.8 kB
      - plot_paper1_UC_and_SOpert.m
        
        7.6 kB
      - plot_paper1_basic_fields_DeltaZAVG.m
        
        5.5 kB
      - plot_paper1_basic_fields_DeltaZAVG_6x3.m
        
        5.1 kB
      - plot_paper1_basic_fields_ZAVG.m
        
        5.1 kB
      - plot_paper1_circulation_diagnostics.m
        
        4.3 kB
      - plot_paper1_circulation_diagnostics_2.m
        
        4.3 kB
      - plot_paper1_circulation_diagnostics_O2.m
        
        3.9 kB
      - plot_paper1_figures.m
        
        982 Bytes
      - plot_paper1_inventory_changes.m
        
        1.0 kB
      - plot_paper1_jointPDFs_profiles.m
        
        7.7 kB
      - plot_paper1_jointPDFs_profiles2.m
        
        9.3 kB
      - plot_paper1_jointPDFs_profiles2_PC.m
        
        9.3 kB
      - plot_paper1_mean_regen_depth.m
        
        3.5 kB
      - plot_paper1_oxygen_diagnostics.m
        
        2.8 kB
      - plot_paper1_oxygen_diagnostics2.m
        
        3.1 kB
      - plot_paper1_oxygen_diagnostics2_SOpert.m
        
        3.1 kB
      - plot_paper1_reg_fields_DeltaZAVG_6x3.m
        
        5.6 kB
      - plot_paper1_regeneratedprofiles.m
        
        6.4 kB
      - plot_paper1_regeneratedprofilesfraction.m
        
        6.4 kB
      - plot_paper1_regpre_DIP_6x3.m
        
        3.5 kB
      - plot_paper1_regpre_O2_6x3.m
        
        3.3 kB
      - plot_paper1_setup.m
        
        1.3 kB
      - plot_paper1_tracer_basin_profiles.m
        
        3.4 kB
      - plot_paper1_transferefficiency.m
        
        6.3 kB
      - plot_paper1_transferred_basic_fields_DeltaZAVG.m
        
        4.9 kB
      - plot_paper1_transferred_basic_fields_ZAVG.m
        
        5.1 kB
      - prepare_model_for_plotting.m
        
        4.6 kB
      - transfer_efficiency.m
        
        7.0 kB
    - plot_PmE_operator.m
      
      2.7 kB
    - plot_circulation_conservatism_divergence.m
      
      317 Bytes
    - plot_circulation_diagnostics.m
      
      6.1 kB
    - plot_in_and_out_matrix.m
      
      3.5 kB
    - plot_loop.m
      
      1.3 kB
    - plot_optimizable_parameters.m
      
      1.3 kB
    - plotall.m
      
      93 Bytes
    - plothorizontalaverage.m
      
      1.3 kB
    - plothorizontalslice.m
      
      1.6 kB
    - plotmeridionalslice.m
      
      1.5 kB
    - plotverticalvolumeintegral.m
      
      1.4 kB
    - plotzonalaverage.m
      
      1.1 kB
    - pumpinboxes.m
      
      869 Bytes
    - shared_plot_options.m
      
      52.5 kB
    - supertitle.m
      
      1.6 kB
    - test_layout.m
      
      251 Bytes
    - xyplot.m
      
      6.5 kB
    - yzplot.m
      
      6.2 kB
    - yzplot2.m
      
      6.4 kB
    - yzplot_dom.m
      
      6.7 kB
  - preprocessing
    - get_mean_pCO2atm.m
      
      347 Bytes
    - loadGLODAP.m
      
      2.7 kB
    - loadWOA.m
      
      2.5 kB
    - loadoriginalGLODAP.m
      
      1.0 kB
    - loadoriginalWOA.m
      
      2.0 kB
    - metadata_file.txt
      
      3.5 kB
    - read_GLODAP_O2_ocim2.m
      
      4.2 kB
    - read_pCO2atm.m
      
      583 Bytes
  - utils
    - GSW
      - gsw_CT_from_pt.m
        
        4.2 kB
      - gsw_CT_from_t.m
        
        2.2 kB
      - gsw_Nsquared.m
        
        6.0 kB
      - gsw_SAAR.m
        
        15.3 kB
      - gsw_SA_from_SP.m
        
        7.4 kB
      - gsw_SA_from_SP_Baltic.m
        
        2.9 kB
      - gsw_SSO.m
        
        1.6 kB
      - gsw_T0.m
        
        1.1 kB
      - gsw_cp0.m
        
        1.2 kB
      - gsw_entropy_part.m
        
        3.4 kB
      - gsw_entropy_part_zerop.m
        
        2.0 kB
      - gsw_gibbs.m
        
        34.9 kB
      - gsw_gibbs_pt0_pt0.m
        
        1.6 kB
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        4.2 kB
      - gsw_pt_from_t.m
        
        6.9 kB
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        8.9 kB
      - gsw_sigma0.m
        
        6.9 kB
      - gsw_specvol_alpha_beta.m
        
        12.9 kB
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        4.2 kB
      - gsw_uPS.m
        
        1.4 kB
    - PCO2_circ_extras.m
      
      454 Bytes
    - PCO2_indices.m
      
      431 Bytes
    - PCO2_initial_state.m
      
      2.1 kB
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      39 Bytes
    - Theta.m
      
      191 Bytes
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      228 Bytes
    - cmap_picker.m
      
      2.1 kB
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      419 Bytes
    - dependency_matrix.m
      
      439 Bytes
    - disptreestruct.m
      
      3.2 kB
    - external
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        DataHash.m
        
        21.0 kB
        
        license.txt
        
        1.5 kB
        
        uTest_DataHash.m
        
        12.0 kB
      - GridLegend
        
        GridLegend
        
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        6.6 kB
        
        gridlegend.m
        
        22.5 kB
        
        license.txt
        
        1.5 kB
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        2.2 kB
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        254 Bytes
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        19.4 kB
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        27.5 kB
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        139 Bytes
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        14.9 kB
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        16.5 kB
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        15.4 kB
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        226 Bytes
        
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        469 Bytes
        
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        305 Bytes
        
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        1.6 kB
        
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        3.8 kB
        
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        200 Bytes
        
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        536 Bytes
        
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        150 Bytes
        
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        885 Bytes
        
        interp3.m
        
        902 Bytes
        
        interpn.m
        
        1.1 kB
        
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        2.0 kB
        
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        394 Bytes
        
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        683 Bytes
        
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        469 Bytes
        
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        470 Bytes
        
        mldivide.m
        
        402 Bytes
        
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        176 Bytes
        
        mrdivide.m
        
        387 Bytes
        
        mtimes.m
        
        353 Bytes
        
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        3.0 kB
        
        num2str.m
        
        898 Bytes
        
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        11.5 kB
        
        power.m
        
        180 Bytes
        
        rdivide.m
        
        389 Bytes
        
        round.m
        
        256 Bytes
        
        scale.m
        
        549 Bytes
        
        sqrt.m
        
        75 Bytes
        
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        1.5 kB
        
        times.m
        
        355 Bytes
        
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        1.2 kB
        
        u2num.m
        
        1.3 kB
        
        unitsOf.m
        
        833 Bytes
        
        validateattributes.m
        
        634 Bytes
        
        Contents.m
        
        716 Bytes
        
        OffsetDimVar.m
        
        3.1 kB
        
        README.md
        
        1.6 kB
        
        baseUnitSystem.m
        
        5.2 kB
        
        compatible.m
        
        462 Bytes
        
        displayUnits.m
        
        1.4 kB
        
        displayingvalue.m
        
        347 Bytes
        
        duration2u.m
        
        690 Bytes
        
        fieldnameswithunits.m
        
        2.7 kB
        
        functionSignatures.json
        
        294 Bytes
        
        iscompatible.m
        
        499 Bytes
        
        license.txt
        
        1.3 kB
        
        nist.m
        
        1.3 kB
        
        plottingvalue.m
        
        297 Bytes
        
        scale.m
        
        144 Bytes
        
        scd.m
        
        43 Bytes
        
        str2u.m
        
        4.0 kB
        
        u.m
        
        50.0 kB
        
        u2num.m
        
        200 Bytes
        
        unitconversionfactor.m
        
        1.9 kB
        
        unitsOf.m
        
        210 Bytes
      - progress_bar.m
        
        178 Bytes
      - whosbetter.m
        
        7.3 kB
    - find_parameters_csv_file.m
      
      1.4 kB
    - find_run_mat_file.m
      
      1.6 kB
    - find_run_output_file.m
      
      1.1 kB
    - first.m
      
      41 Bytes
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      1.4 kB
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      153 Bytes
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      3.9 kB
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      2.1 kB
    - gethostname.m
      
      149 Bytes
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        1.5 kB
    - guess_idx.m
      
      204 Bytes
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      763 Bytes
    - list2str.m
      
      432 Bytes
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      277 Bytes
    - list2underscoredstr.m
      
      194 Bytes
    - log_job_as_finished.m
      
      233 Bytes
    - matrix_from_struct.m
      
      380 Bytes
    - mu_C_atm_from_pCO2.m
      
      632 Bytes
    - number_of_air_moles_in_atmoshpere.m
      
      534 Bytes
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      114 Bytes
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      5.1 kB
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      1.2 kB
    - read_saved_solution.m
      
      1.1 kB
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        1.4 kB
      - regrid.m
        
        1.6 kB
      - regrid_2D.m
        
        2.2 kB
      - regrid_3D.m
        
        2.6 kB
    - signedlog.m
      
      400 Bytes
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      526 Bytes
    - solubility_O2.m
      
      1.7 kB
    - sparselabels.m
      
      407 Bytes
    - sumstruct.m
      
      189 Bytes
    - tracer_manipulations
      - as3D.m
        
        501 Bytes
      - enforce_decrease_with_depth.m
        
        258 Bytes
      - horizontalaverage.m
        
        185 Bytes
      - horizontalslice.m
        
        250 Bytes
      - meridionalslice.m
        
        270 Bytes
      - packtracers.m
        
        430 Bytes
      - rearrange_into_3Darray.m
        
        105 Bytes
      - scale_vector.m
        
        391 Bytes
      - scaled_function.m
        
        400 Bytes
      - submodelFPCO2.m
        
        720 Bytes
      - submodel_tracer_indices.m
        
        748 Bytes
      - submodelfunction.m
        
        671 Bytes
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        230 Bytes
      - volumeaverage.m
        
        262 Bytes
      - volumeintegral.m
        
        210 Bytes
      - weightedaverage.m
        
        300 Bytes
      - weightedsum.m
        
        276 Bytes
      - xy_permutations.m
        
        962 Bytes
      - zonalaverage.m
        
        175 Bytes
      - zonalslice.m
        
        234 Bytes
    - vecrast.m
      
      8.2 kB
    - viscosity
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        1.5 kB
      - seawater_density.m
        
        2.7 kB
      - seawater_viscosity.m
        
        2.8 kB
      - viscosity_factor.m
        
        1.1 kB
- startup.m
  
  1.7 kB
__MACOSX
- Pasquier_etal_2023_zenodo
  - ._.DS_Store
    
    120 Bytes
  - data
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      120 Bytes
    - ._ACCESS_files_metadata.csv
      
      233 Bytes
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      213 Bytes
    - ._GLODAPv2.2016b_MappedClimatologies
      
      178 Bytes
    - ._Kw660_ocim2_v2.mat
      
      213 Bytes
    - ._MLD_maxp_ocim2.mat
      
      1.6 kB
    - ._O2obs_91x180x24.mat
      
      213 Bytes
    - ._OCIM2_CTL_He.mat
      
      213 Bytes
    - ._alk_gd_obs_91x180x24.mat
      
      213 Bytes
    - ._basins_NEW.mat
      
      213 Bytes
    - ._cbpm_npp_ocim2grid.mat
      
      213 Bytes
    - ._default_parameters.csv
      
      188 Bytes
    - ._default_parameters.xlsx
      
      244 Bytes
    - ._dic_gd_obs_91x180x24.mat
      
      213 Bytes
    - ._po4obs_91x180x24.mat
      
      213 Bytes
    - ._sio4obs_91x180x24.mat
      
      213 Bytes
    - ._vgpm_npp_ocim2grid_filledmin.mat
      
      213 Bytes
    - ACCESS_matrix_builder
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        120 Bytes
      - output
        
        ._.DS_Store
        
        120 Bytes
    - ACCESS_tracers
      - ._.DS_Store
        
        120 Bytes
    - GLODAPv2.2016b_MappedClimatologies
      - ._.DS_Store
        
        120 Bytes
    - GSW
      - ._.DS_Store
        
        120 Bytes
    - WOA18
      - ._.DS_Store
        
        120 Bytes
  - output
    - ._.DS_Store
      
      120 Bytes
    - ._run_history.xlsx
      
      244 Bytes
    - ._run_history_commented.xlsx
      
      350 Bytes
    - figures
      - ._.DS_Store
        
        120 Bytes
      - paper1
        
        ._.DS_Store
        
        120 Bytes
  - src
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      120 Bytes
    - ._utils
      
      213 Bytes
    - biogeochemistry
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        CO2sys
        
        ._derivnum.m
        
        213 Bytes
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        176 Bytes
    - plotting
      - ._.DS_Store
        
        120 Bytes
      - ._flux_divergence_map.m
        
        176 Bytes
      - ._flux_divergence_zonal_integral.m
        
        176 Bytes
      - paper1
        
        ._transfer_efficiency.m
        
        479 Bytes
    - preprocessing
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        234 Bytes
    - utils
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        313 Bytes
      - ._solubility_O2.m
        
        213 Bytes
      - GSW
        
        ._gsw_Nsquared.m
        
        213 Bytes
        
        ._gsw_T0.m
        
        213 Bytes
        
        ._gsw_cp0.m
        
        213 Bytes
        
        ._gsw_entropy_part_zerop.m
        
        213 Bytes
        
        ._gsw_gibbs_pt0_pt0.m
        
        213 Bytes
        
        ._gsw_pt0_from_t.m
        
        213 Bytes
        
        ._gsw_sigma0.m
        
        213 Bytes
        
        ._gsw_specvol_alpha_beta.m
        
        213 Bytes
      - external
        
        ._Sc_CO2.m
        
        213 Bytes
        
        ._Sc_O2.m
        
        213 Bytes
        
        ._cprintf.m
        
        213 Bytes
        
        ._d0.m
        
        213 Bytes
        
        ._equic.m
        
        213 Bytes

Pasquier_etal_2023_zenodo.zip