Published March 29, 2023
| Version v2
Software
Open
Quantification of Giant Unilamellar Vesicle Fusion Products by High-Throughput Image Analysis - software
- 1. Laboratory of Biology and Information Science, School of Life Sciences, East China Normal University, Shanghai 200062, China; Laboratory for Artificial Biology, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento, Polo Scientifico e Tecnologico Fabio Ferrari, Polo B, Via Sommarive 9, Povo, 38123, Trentino Alto-Adige, Italy
- 2. Laboratory for Artificial Biology, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento, Polo Scientifico e Tecnologico Fabio Ferrari, Polo B, Via Sommarive 9, Povo, 38123, Trentino Alto-Adige, Italy
- 3. Department of Physics, Graduate School of Science, Tohoku University, 6-3 Aramaki, Aoba, Sendai 980-8578, Japan
- 4. Laboratory of Biology and Information Science, School of Life Sciences, East China Normal University, Shanghai 200062, China;
Description
Scripts developed for the analysis of vesicles fusion experiments by high-throughput image analysis for "Quantification of Giant Unilamellar Vesicle Fusion Products by High-Throughput Image Analysis".
- Quick User Guide for GUV fusion Analysis.pdf is a short manual detailing the main steps to complete the analisys of imaging data by our system
- GUVfusion_Analysis.ijm is the ImageJ macro used to segment GUVs
- GUVfusion_AnalysisTemplate.R is the R template script for data elaboration and visualization. It makes use of the other two R scripts included
- GUVfusion_dataElabFunctions.R contains data elaboration functions to import raw csv and tiff data in R
-GUVfusion_plotFunctions.R contains data visualization functions.