title: EN2(143-259) simulation with Amber ff03ws
author: Kiirikki, M. Anne; Ollila, O. H. Samuli
description: MD simulation of a protein EN2(143-259) with Amber ff03ws forcefield. Force field parameters for proteins and counterions are dowloaded from https://github.com/bestlab/force_fields, for NaCl from https://bitbucket.org/hseara/ions The trajectory files with solvent have a saving frequency 100 ps. The trajectory file EN2_1000ns_protein.xtc has a saving frequency 10 ps.