title: Molecular dynamics of DSB in nucleosome
author: Fabrizio Cleri
description: These files contain the coordinate files (.gro) and compact trajectory files (.xtc) from the GROMACS runs of the nucleosome models O (experimental 1kx5), M1-M4 (model O with double strand breaks at various positions). Trajectories are compacted from the .trr files, by excluding water molecules and ions. Frames are stored each 40 ps for ~1 microsecond trajectories (~25,000 frames per .xtc file, ~2 Gb each).PLOS submitted manuscript "Mechanical evolution of DNA double strand breaks in the nucleosome", by F. Cleri, F. Landuzzi and R. Blossey