Published May 13, 2024 | Version v2.6.3
Software Open

fmalmeida/ngs-preprocess: A pipeline for preprocessing short and long sequencing reads

  • 1. University of Brasilia @compgenunb

Description

The pipeline

ngs-preprocess is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It uses Docker/Singularity containers making installation trivial and results highly reproducible. It is an easy to use pipeline that uses state-of-the-art software for quality check and pre-processing ngs reads of Illumina, Pacbio and Oxford Nanopore Technologies.

Files

fmalmeida/ngs-preprocess-v2.7.1.zip

Files (4.3 MB)

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Additional details

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