baseMean	log2FoldChange	lfcSE	stat	pvalue	padj	contrast	normTag_BALBCJ_F1_LPS	normTag_BALBCJ_F1_Control
Merged-chr2-68879298-4	28.9360162990704	0	1.28624214598431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167740982-4	20.6265187427731	0	1.28152474152174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86406489-4	17.8188773707739	0	1.27615121465975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136492398-4	19.4075632391588	-0.107330672150263	0.678000594031351	-0.158304687481291	0.874216714643614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51349744477298	0.843323834477631
Merged-chr5-114654226-8	41.6090393840304	0.266784460119815	0.259891029592154	1.02652431112562	0.304644510309138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17704491199747	5.46171823457089
Merged-chr3-69529777-2	5.23761254198523	-1.5905529609349	1.27193329845834	-1.25050029184922	0.211116848776535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	0
Merged-chr10-98744342-4	40.5198086927827	0	1.27416429900767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113917781-4	18.2762601296236	0	1.29264624282006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66746661-8	106.218319792636	-0.396357783885428	0.186237896423078	-2.12823378860025	0.033317704673415	0.277312282459429	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.85762502394912	6.46737107117568
Merged-chr5-139017892-4	27.5357438951178	0	1.2836353857013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73623288-4	12.1319395019067	0	1.28445369416263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113668973-4	63.0811912420771	0	1.28133500345663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21729550-2	8.94501712889728	0	1.35244208995093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122823593-4	26.5724716637405	0	1.28402919912532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105288772-8	93.0750477399046	-0.318865868071082	0.205994391079919	-1.54793471025807	0.121638016642294	0.716796630490336	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04165368309327	5.71988756831146
Merged-chr8-126832741-4	38.5364091390043	0	1.28441882165597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39241739-4	17.7235829738934	0	1.29944627483408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46477014-4	32.4871608932456	0	1.27808489961723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117891609-4	12.1305333907382	0	1.28839513874887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106819829-1	10.4962791487188	-1.38596377129552	1.03651637571876	-1.33713639626237	0.181178118671424	0.949071024783828	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62709434254231	0.609949614787909
Merged-chr18-23843549-4	18.5731775567311	0	1.28199142603687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21055628-4	20.7155554702211	0	1.28303111767627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62547093-4	15.8621819113708	0	1.28890161915708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60901713-6	59.4847581044029	0	1.27436929179967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193844635-4	18.48390925895	0	1.2817207042698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53361549-2	3.28729368635527	0	1.46770608900812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-6318-3	227.51277674085	0	1.44376072957618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119414395-3	12.2312825930012	-1.36978469454567	0.656658415351608	-2.08599275136407	0.0369792796696777	0.298216464185457	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79881329184827	2.30670691456252
Merged-chr17-29381643-8	117.993188261463	-0.664415306162031	0.22370809060081	-2.97001017878978	0.00297789881810844	0.0441989447476128	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.58051378337797	6.90124390945823
Merged-chr18-39835846-4	15.9416951944825	0	1.27853458803514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57819467-2	3.93285256003312	0	1.37679369207876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135411184-4	23.6582307819132	0	1.27586176689833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113267455-4	9.98504657274703	0	1.29323230403528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180401974-4	40.0087669063147	0	1.27627554983566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81518511-4	11.1966290729849	0	1.28682668288921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98032390-4	17.1617821761483	0	1.27802948469672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96936941-4	12.7365381793045	0	1.29271004489287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36364826-2	6.69364562434012	0	1.34664936588031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28386210-4	90.9887571740671	0	1.28244061846902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38313583-2	4.70616555996122	0	1.39854763480421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36032697-2	6.64389912658423	0	1.32410081055245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110933010-4	15.7119209058047	0	1.28438425503826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38576187-2	6.89811792266351	0	1.33647682630529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123671209-4	12.1210034135587	1.94904895712844	1.24631297444404	1.56385193534384	0.11785234434918	0.700999389572319	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr17-17448857-4	39.5257688933387	0	1.28007089200359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115494505-4	25.5158777405275	0	1.29172663079506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89287675-2	3.34527849849803	0	1.39421121946213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95530900-4	23.3519793923724	0	1.27747692288974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80452217-6	26.3915011991248	0	1.28220094951779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-14953661-4	33.1833599720443	0	1.27843860225996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115538829-4	29.3421448104172	0	1.27666880553076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63553982-4	41.2650754931963	0	1.27895074567173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120032107-2	6.52040963713955	0	1.33991091595456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95521394-4	18.0647702239137	4.04323457826158	0.985349534913816	4.10335057256126	4.07209493989039e-05	0.00155611178913496	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.08628700317133
Merged-chr12-11196417-2	6.23799221344872	1.31218513468273	1.29607475922164	1.01243012823641	0.311332439066103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr14-105082317-1	1.27587917815571	0	1.60320749174713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120158028-2	3.52380326544935	0	1.55273560662805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55824216-4	19.2147551709781	0	1.2831287786945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61548734-4	36.1831967235564	0	1.29188340539344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114639566-4	11.557235836382	3.3743059756378	1.0476514699331	3.22082875123849	0.00127820499869451	0.0230122679153899	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26501898168246
Merged-chr2-128715652-1	3.35173586164298	0	1.38834174811887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10898537-2	2.63540632329859	0	1.44941224216495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63971023-1	2.13118120482932	0	1.46123015529979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62556663-4	37.5177372506578	0	1.27889157339982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8021116-1	2.63286110269537	0	1.4337974869996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3170984-1	7.23843825460157	0	1.31964026064793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14210242-4	14.9453204022172	0	1.28348903602139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96374779-4	29.65356610914	0	1.28157736057414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51455548-3	8.65247983644365	0	1.30495760890766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45299416-4	41.5105135157516	0	1.2852044548394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77033475-8	83.2622262974148	0.094943471334962	0.193317795159229	0.491126392460459	0.623337055752161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93092251836672	6.04784651238916
Merged-chrX-56482097-4	29.0286783644963	0	1.28193520048274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81523471-6	31.6186933934935	0	1.27984388204829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50409553-4	14.6222975456694	0	1.28105907940379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24419925-3	9.96737434544361	0	1.29533399478935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34118191-4	14.741353406997	0	1.28802242132511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89422133-4	34.8638483394687	0	1.28144084706837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26885508-4	14.8037941660731	0	1.28226661980787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131478442-4	28.0152271747938	0	1.27952625004997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51509237-4	14.6205682669623	0	1.28769399595853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152554354-4	28.0528325819707	0	1.2831206093473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21053793-3	9.9808512726895	0	1.34764675159667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149940437-4	26.8662498096393	0	1.27966866534053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72601095-1	2.61051250731933	0	1.36812002182048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6398378-2	3.97658255951818	0	1.50658328313374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5851382-1	1.72338020312871	0	1.57413979213895	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180835420-4	28.4625941487017	0	1.27685604680556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52257875-8	168.533470749457	-0.332735309670749	0.176368390420067	-1.88659265346956	0.0592151356540051	0.419728497367924	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.56838516467806	7.23379059786582
Merged-chrX-109189765-4	17.3571397349179	0	1.28076047113006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95758581-1	1.86180690956624	0	1.51920056768672	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61702532-4	75.7201191354011	0	1.27866195495067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17005128-4	67.0721526391959	0	1.27706263178324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39369570-4	24.5339299500736	0	1.27491326272838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125607999-8	74.8830467078282	0.421792156014632	0.259933629635237	1.62269174868419	0.104655316154533	0.642945426846567	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31289468562615	6.74248083206506
Merged-chr2-124927559-4	16.3767048380047	0	1.28149332601694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42943636-4	17.7286046000575	1.64863177892905	0.578991719268988	2.84741857968288	0.00440753671508503	0.0590315421569884	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54950261053985	2.50979755465185
Merged-chr8-126842243-2	3.23957017445144	0	1.36056319730967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66447582-2	3.86584242019582	0	1.38825737347265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107402390-2	8.56222307473578	0	1.31487831474845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48410117-4	27.6245957559593	0	1.28527921171244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166776454-2	4.32336818884016	0	1.40528241412467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25379080-4	24.4508524725843	0	1.29767751058478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27232544-4	21.8903871170073	0	1.28330210663205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76328492-2	4.01654544319666	0	1.35855418410678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113580086-4	13.8342118727945	0	1.28726541572161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10754644-2	7.65259131235267	0	1.39328621865766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122985332-4	14.2328780951498	0	1.28170862900339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14074441-4	21.3651446146695	0	1.28145786697105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136135204-4	44.3867623960736	0	1.2793562627614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52653495-8	55.99158255195	-0.0486218559252819	0.215352843019176	-0.225777636568988	0.82137437142635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12978977530783	6.06683481961735
Merged-chr2-31446239-4	14.0607706131725	0	1.29026491434734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63474559-1	4.41409787999529	0.180458132205611	1.20275751673361	0.150037002217778	0.880735422120315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14263512595936	0.905469781553611
Merged-chr12-86896622-2	3.51313512511909	0	1.47457880418431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129062948-1	3.46071184734634	0	1.3753976403287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90323422-4	28.2086250561194	0	1.27933374240712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83834407-4	38.9899138504315	0	1.2823072848379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25707753-4	58.4285071891433	0	1.28066825580267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124921726-4	21.7367837244575	0	1.27799751145282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32966931-4	31.3312671180235	0	1.27540286647038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116616966-4	24.4544972583939	0	1.28206099047735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132358993-4	37.5667321008401	0	1.28178129761065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46138290-6	36.8043432560616	0	1.28079837160894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30908125-4	23.1294964200912	-0.809234313934207	0.717257024452476	-1.12823476988872	0.259220783396114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68692456751471	0.735627456805112
Merged-chr7-80715438-4	46.2215059766469	0	1.28032812778569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62828938-4	72.7435403098381	0	1.28245014973839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116377571-2	3.59637961827313	0	1.51582902563738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47261286-4	56.6734863567671	0	1.28246558479002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9009864-4	31.6252734295841	0	1.27925285294972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65973360-4	40.785969313426	0	1.2799785004523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58725976-4	28.6915325969066	0	1.30527236396424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84990075-4	22.6201009294037	0	1.27816889692386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94381204-4	28.4767680326933	0	1.28198696586231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-16953567-1	1.45416866031158	0	2.0903876860852	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-28051-1	25.5516140852322	0	1.2851480947096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30606604-2	5.26661473963387	0	1.35860704021492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-133053033-4	35.9969633572531	0	1.27500495813148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191662370-1	1.68878767807184	0	1.72010806840656	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82847171-4	17.3131118642125	0	1.28932487694577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25783949-2	4.62795191681171	0	1.39956462258169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75192977-4	19.6139841601954	0	1.30438139278526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128133828-4	24.0609448202947	0	1.27781723885916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121890798-4	25.0420832535486	0	1.27789431973474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52302376-4	15.1659944269119	0	1.29419846882342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84767697-4	37.8342611798185	0	1.27632473858231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127045625-4	16.8026966817	0	1.2807618265295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122774359-4	13.9897887500355	0	1.28883505795499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21995794-1	2.72598953499073	0	1.44775940381906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101908791-1	2.67797120192451	0	1.36386574374837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35904558-4	17.2739050257435	0	1.28425554290773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87503059-4	78.279702332493	0	1.27823344979983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105669205-1	1.83279772231068	0	1.60055575752049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84748364-2	4.53245495241044	0	1.32823072547128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101879962-4	37.9186420732268	0	1.28901705056776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131658194-4	26.3575169981327	0	1.27917277129954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17851074-4	17.6747146040376	0	1.28574491105659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52956095-4	31.1087003286008	0	1.27435997525122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164866873-9	99.3885389766363	0.60600992047675	0.192228319692753	3.1525527635333	0.0016184956842222	0.0274992769061841	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06102230458811	6.63986884316534
Merged-chr6-37144909-1	3.65135893486388	0	1.37869448015216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28257089-5	32.5346905585516	0	1.27634581939267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120436915-4	17.0093578721685	0	1.28393534162416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25614915-4	11.1270607623094	0	1.30979114710214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10178308-1	2.41405036710048	0	1.35889482327062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138039308-2	4.97178489796854	0	1.34374656417406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76219243-2	4.44932852189543	0	1.36258723132422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87859992-4	11.6106085153789	0	1.28753920844764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44579598-4	26.0746224866564	0	1.28119159697805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98683397-4	12.2968586626741	0	1.30369783229929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99785401-4	14.0311969696088	0	1.28350952146128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53530382-1	2.6560697888732	0	1.54082421534738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83129859-7	24.3146483200254	0	1.27976822409873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45121714-1	2.32980028444122	0	1.52297238373534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84981855-4	21.0340923680548	0	1.28904955724062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6244716-1	2.56419550636572	0	1.35947189584373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13159720-2	6.49654010324983	0	1.35940043946504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43998665-2	3.66101696979511	0	1.33733563935787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96686336-4	42.1241700560927	0	1.2783927036432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93234931-4	34.2536218992087	-3.53783467803771	0.486294394476522	-7.27508833789059	3.46193833994437e-13	2.90030542002571e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24848542284164	2.30243522796951
Merged-chr10-96338233-4	33.2366953970412	0	1.27687974123988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85345717-4	19.0786794424002	0	1.2808026784524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19895353-4	30.1865880111881	0	1.27610953499556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61099164-4	26.0753743191235	0	1.28539538780023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173430516-4	24.7999335469528	0.940951707961852	0.955704230349618	0.984563715510216	0.324838419962885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0.825079211029734
Merged-chr10-34131530-4	31.5611361356524	0	1.27903501528852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-12606-1	192.709975120684	0	1.35508354848882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57347174-4	50.5064399460673	0	1.27665479687837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48694708-4	14.0759194203326	0	1.28293160223519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27926058-4	51.6213809825054	0	1.28084386395918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27715436-4	18.058924014762	0	1.28265251568244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31608935-4	11.5937322912861	0	1.28287917833435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49468049-4	48.9435881381253	0	1.27503045897717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89985480-6	41.6234017922645	-2.44838554779511	0.418189854312563	-5.85472249636439	4.77807150493292e-09	9.54825261655494e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30498317675836	2.98149480288825
Merged-chr13-42286065-1	1.68217754304015	0	1.65702642423806	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58989030-4	40.7802468002838	0	1.27568046243042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124015959-4	25.2478114477383	0	1.28157335398627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99381791-4	43.0047788518266	0	1.27596052255102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24094568-2	2.57194216032229	0	1.44821322308587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66235741-4	29.1625300009867	0	1.27695081338055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130903952-4	18.7103827384261	0	1.2788213825796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95236469-4	42.8217174288913	0	1.27920058394375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100381258-4	18.8446667851076	0	1.28589113717757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112413787-1	2.63067570249347	0	1.38809372617651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14112375-4	17.8716213066423	0	1.29100100584782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5615151-3	10.019974170173	0	1.32214290922021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109440550-1	4.81835811956324	0	1.40173348732052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51911622-4	17.3764775361843	0	1.28050199106193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99122908-4	22.0252404935317	0	1.28723111136445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45916462-1	1.94856141900623	0	1.48131487934365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120324402-4	18.1314004214769	0	1.28516782350833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120883036-1	6.28987939658919	2.41889524896944	0.957223365536082	2.5269914380065	0.0115044307369607	0.123401252394721	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.848621293923477	1.8134253095212
Merged-chr14-47350990-8	73.9930988799811	0.226435568760206	0.20694350769286	1.09419025165204	0.273871546016749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75921742241138	5.96783354049297
Merged-chr1-106818586-2	6.98785744136655	0	1.30859179193141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38567609-1	2.40792422396054	0	1.37678904052584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25011117-4	19.8940863938255	0	1.28506845308875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112594680-4	18.2978531947493	0	1.27920002071478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64616415-4	40.7395668825104	0	1.2753049229211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88336560-4	30.1138487640456	0	1.27938608357395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66864619-4	89.2904679885674	0	1.27693003028748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71275480-4	15.2719205238497	0	1.28075387071232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131436357-4	27.8744257942877	0	1.29513664124925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140749723-4	14.9685321007099	0	1.28287517841322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-139919923-4	48.5633581014644	0	1.28037365296586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130801431-4	36.68379474556	0	1.27677346769474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18681089-4	19.3631349240158	0	1.27962196355126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120109372-4	27.5215878581694	0	1.27871474303586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128089341-4	17.1880694514112	0	1.28093874856579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71988260-4	28.6228862889881	0	1.27827096200744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66242970-4	18.1041498519074	0	1.27703909319879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144308476-4	15.8246399780221	0	1.29201697168195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94177917-4	48.4875639547342	0	1.27331054227312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63447976-6	37.8950676772884	0	1.27577224444216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100855967-4	25.350448895818	0	1.27696916519875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14669580-4	29.3145647368783	0	1.27573201545542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169095745-1	2.00312703177706	0	1.46896793994236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21787384-2	4.63283759690157	0	1.39823251892147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63052984-4	24.6849779823334	0	1.27922812116924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170853803-4	23.9822356305439	0	1.28625388320654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42258654-4	29.4316513765759	0	1.27918747946865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180405843-4	9.99034338690565	0	1.29565392393817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53855162-4	12.8479550866588	0	1.28770579911175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83637505-4	32.8958848539047	0	1.28242081834929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68363415-4	98.1527952694273	0	1.28081145499501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25321365-4	20.5665625102557	0	1.27921009118312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76615028-4	25.544268951893	0	1.29475740154653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99152947-1	1.85843236889904	0	1.55380155550837	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95748957-4	26.146856451214	0	1.28358921296384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37361120-2	6.32801194932963	0	1.32481532935854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33090727-2	5.05075072589067	0	1.42384343567052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59394009-4	22.2663462689312	0	1.27994562992291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-5874-3	195.053548745273	0	1.41485034806984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32133215-4	20.9867933447304	0	1.28804477942556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-43011330-2	2.50354508830896	0	1.62671637369515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74647546-4	22.0935020460411	0	1.28371760741797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170998407-4	53.2412606002484	0	1.2772725495976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98522783-1	4.6154130358879	-0.518230356050129	0.822225649784765	-0.630277535352718	0.528513018174989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09865544037678	1.5122114716189
Merged-chr11-83789426-4	19.5652234504627	0	1.27655187446282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87387696-2	3.77793840018696	0	1.37474266857043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84647876-4	25.215756688003	0	1.27717232216498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41433388-2	5.31658206676704	0	1.30302018873142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30992362-4	12.0264269615397	0	1.28481845751562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41332407-8	59.2423815679241	0.354395076716884	0.207942153366124	1.70429646408874	0.0883257152350703	0.564307018747644	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58251102599597	5.92654144670167
Merged-chr16-24136703-4	14.2610678132168	0	1.29168718375174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3137910-3	10.0782535362864	0	1.28899425142704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103012719-4	30.3992830212781	0	1.29768176246935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26780715-4	19.2698475830511	0	1.2870162696399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120698018-2	5.48571172791874	0	1.36943934374876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54398283-4	14.9099534833866	0	1.29539751101254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98786999-4	18.0220005443713	0	1.28062594255507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135182028-4	21.6482756142644	0	1.28096467042886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149445472-4	38.0235107510471	0	1.27913184614593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73632459-4	17.4091664170672	0	1.28390873540129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90215395-4	39.4261452569849	0	1.2751911488256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91825970-4	19.3279619500557	0	1.28025355300057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-88445654-4	18.7181870801991	0	1.27794959780656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54201994-1	2.32173757913922	0	1.43752496425344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20750067-4	24.7849796823896	0	1.28654466793156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64301477-7	75.4430878898802	0	1.27613377875759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100834982-4	54.376709567331	0	1.27623741434166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126228246-4	21.8236411940473	2.82105543799731	1.12748150632959	2.5020857744984	0.012346400849312	0.130219134511707	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.04220233489076
Merged-chr18-10646655-4	19.6775771934429	0	1.2785425621598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20681318-4	18.3951475735206	0	1.28798945357256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137883112-4	18.4310315580285	0	1.27852209647986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104233190-4	19.860976936493	0	1.28317195646493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46851810-4	30.23294606557	0	1.27935377324526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12832886-4	14.9346687803679	0	1.28524078384244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66879667-4	14.4794615346612	0	1.29196568822278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45294416-5	20.7152219163951	0	1.27882608543878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64002089-1	3.87524465022266	0	1.32018423213166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57959426-4	32.1365014924621	0	1.27615666044814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113589723-4	90.8915669917762	0	1.27726626842929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59563006-4	22.8483756616657	0	1.28246089986413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61395615-2	3.41018506400388	0	1.48251677456384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117119587-2	13.3442708445579	0	1.29303898647224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91137591-4	46.8942775629155	0	1.27808791197312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19026835-1	2.10934964598088	0	1.80395375767315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-48080807-8	60.5344774322092	0.334231367511992	0.209220521434534	1.59750757344602	0.110152610857523	0.667328196204292	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98905837309093	6.30572310747944
Merged-chr13-55190412-4	37.4739925858545	0	1.27871128602549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126858090-2	7.61864930495794	0	1.39494582605836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122654611-4	92.702626192907	0	1.27916993507722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9133891-4	13.6074835617382	0	1.3048854746773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36947670-4	12.7448752676242	0	1.28668278200031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36449466-4	26.8432577520833	0	1.27625626398928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68864854-4	30.4172272531514	0	1.27747192871791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108201305-4	51.0874482412685	0	1.27943882143576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8912885-4	32.8909455991333	0	1.27695069471166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34781535-2	8.9664962821747	0	1.63973705236557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47793516-4	37.7445355538049	3.89357440479152	0.988332577390552	3.93953866730927	8.16384438051869e-05	0.00270387518950519	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.05066483796074
Merged-chr3-108389374-4	20.5592258641925	0	1.28417567122516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26535924-1	12.0494712983636	1.31839658911543	1.29223644368357	1.02024408579384	0.307612714074288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr10-75505819-2	3.93374955696022	0	1.3567421189161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164084203-4	14.7134501307196	0	1.28251948343826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28335015-1	1.4917660262411	0	1.7944539438922	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77826372-4	18.4913571284641	0	1.28287581018595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83066463-2	15.3216030503233	5.69410347534732	0.945083434307161	6.02497437649159	1.691364174861e-09	4.00448852791546e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.2549409351977
Merged-chr13-4771664-8	204.061614579945	0.122041321930173	0.172829234754344	0.706138183760634	0.480102208031374	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.2667196998797	7.39198080731427
Merged-chr7-83659566-4	52.971685070015	0	1.28338894284511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95106141-4	45.0020460210829	0	1.27601383585999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88969086-1	1.8248028434646	0	1.50160486776057	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93069507-4	30.6247473303761	0	1.27603054657395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128781237-3	19.5214314282737	0	1.28577944196006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60707847-4	14.0070329101369	0	1.27902432534045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8412975-4	25.7395119872574	0	1.27716440755796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88118917-4	24.0959094461077	0	1.27788491691067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108571419-4	27.3089477137187	0	1.27531727774759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148574470-2	4.51203850814725	0	1.39550545852672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44405723-4	53.9591734056619	0	1.27927845254217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38289155-4	27.956600293432	0	1.27699476779446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141506509-8	92.7615111724241	0.0834617720695383	0.165935925977486	0.502975902161549	0.614981214778745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.7458879659153	6.82410435871319
Merged-chr8-69115153-2	5.41075610900292	0	1.42554558865659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5036608-4	17.0363170468289	0	1.28628169350875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120083192-4	29.3298229410887	0	1.28212310235299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95651404-3	19.0643057884443	0	1.28203641729733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52905265-2	4.74099392312563	0	1.33417756099149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102393686-4	32.2937841104764	0	1.27819489702149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72425506-4	15.7882210721671	0	1.27964333168351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108555086-4	16.6312921717373	0	1.28762770100971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25637924-4	56.0127967348968	0	1.27752707231965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36564008-4	20.1033877534591	0.445193064408318	0.675570021133033	0.65898878055847	0.50990297326177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6749119688665	1.57928534738074
Merged-chr2-128249435-1	2.32979432573454	0	1.38828028892206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-10458-1	26.3740953394743	0	2.43325020578267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145272845-2	6.97795258295127	0	1.35480994522883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120805007-1	1.76945774085995	0	1.62706931739467	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180296245-4	20.4060230286546	0	1.28608664519086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71628010-4	23.0009187769674	0	1.28735076350427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12858063-4	16.4757554626676	0	1.2896993629671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110430768-4	18.4955587143772	0	1.28349734373326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180778342-4	15.0965217439097	0	1.2814723493577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9975085-4	39.9394564895117	0	1.28918893674538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80836154-4	30.0856512642565	0	1.27422701290382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51931955-4	43.7354765104932	0	1.27864845378266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68796167-4	18.4605493530138	0	1.28183843067519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130847386-4	15.0219510302123	0	1.2799754658184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90916234-4	27.8868500916611	0	1.28343571351996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57707995-4	24.1853916845587	0	1.27477180505958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87334178-10	101.69384866449	0.198796623805504	0.244109170339897	0.814375893903124	0.415429644039457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30899032100701	6.49475412416183
Merged-chr12-84175860-4	39.3383484643003	0	1.27824876665847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106881014-2	2.8773885325186	0	1.71075407801376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129081785-4	23.541090300553	0	1.27953255073496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66015733-4	22.914051356507	0	1.28321529362695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78331794-1	1.958546093618	0	1.41980232938346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6144780-2	4.16501611964451	0	1.40147282736874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134567685-4	19.6477668176256	0	1.28027543881873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27351666-8	65.8978385982832	-0.334667579152223	0.200831529522818	-1.66640955206289	0.095631869557261	0.599554844870841	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.42432398051136	6.09925113614541
Merged-chr1-135691195-4	13.7750333418025	0	1.28219984598041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-27018611-4	53.019832520221	0	1.27498391155608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45246290-4	37.2973759938646	0	1.28570837226743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35081203-4	27.8175131944949	0	1.27982969956994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36574764-4	16.0974603349691	0	1.28226421398453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76609046-1	4.44034919166075	0	1.3949208358997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122657854-4	51.3478806943706	0	1.27983481489931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97749058-4	13.9844294746327	0	1.28626409128864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139175465-8	64.0698172752461	0.66297724399993	0.227328173977195	2.91638837545247	0.00354109407233048	0.0501161611636622	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93199225203894	6.59610547230379
Merged-chr10-100033083-2	7.7754347178001	0	1.34326948384903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123897496-8	75.1310612664294	-0.345997982895236	0.239832868823961	-1.4426629035122	0.149115454100071	0.826049616724638	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47262837335499	6.11903518694313
Merged-chr7-31037146-4	26.6934564563729	0	1.28752988462834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63611343-4	15.5331070414193	-0.179720688595923	0.675388579674861	-0.266099685432114	0.790162437257067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06085050432355	1.81518459389541
Merged-chr2-167958990-4	20.8920303269681	0	1.28343688325721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95037537-2	10.686933884279	0	1.29225942810629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21894953-1	2.2767127414371	0	1.38316675662258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128843206-4	40.5474265455686	0	1.2819173730619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35157137-1	2.19628473372585	0	1.38597673792307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15738598-1	3.50623825621297	0	1.4011708991312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105561808-2	4.90115286599587	0	1.43239046818442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66231095-4	46.9875312035259	0	1.28355435109976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22818610-4	16.4123890256173	0	1.28461514924333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47273081-4	19.2251757996802	0	1.28827972015026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34958725-2	7.92887720553798	0	1.34779130692317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113591970-1	3.96472712839967	0	1.3441277956405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129528139-2	6.04716362280431	0	1.32364843153115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5165945-1	2.49661381773133	0	1.35740129490297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145222163-4	39.4830234681728	0	1.28645343944572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57290347-5	28.7808803032718	0	1.27522508467847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70107142-4	17.9304334984831	0	1.28581333714625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69012791-10	94.3874369304959	0.223435920414935	0.180323510548808	1.23908368761742	0.215314507361199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.36711107595354	6.61072614428017
Merged-chr7-132804159-4	32.921034892792	0	1.27455810082743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117194662-4	68.8735837149777	0	1.27518871579179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35724003-1	2.91799352033052	0	1.35981185463872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83632008-4	46.092666047306	0	1.28520683498115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126746925-4	32.8383509317964	0	1.28523383432009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-25791532-4	33.6342508216682	0	1.27443274336931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139430356-4	22.0426516952719	0	1.28358608924055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105411083-1	2.53548311836843	0	1.48457482422776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50306813-4	16.2344163805697	0	1.28116960669894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28037180-7	71.8327213624914	0	1.27216686577235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53120538-4	77.3437887497626	0	1.27900422084737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105716907-4	15.1480583692904	0	1.29027960920345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31177048-4	12.0602035393836	0	1.28412783163218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136292639-2	5.14674235435879	0	1.35239896322479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127632123-4	52.5614672474661	0	1.28008298271607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95869002-8	108.26222727673	-0.378959678405701	0.177872253821124	-2.13051597573391	0.0331290382969745	0.276186996256856	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71561910824765	6.33436906597981
Merged-chr13-5785671-4	32.9664654319173	0	1.28703828910433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6540209-2	8.41063698501906	0	1.36871189880758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107357321-4	9.23776561331081	0	1.29906878664459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80176026-3	8.54735867259222	0	1.29895811906803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122598188-4	25.4451208407329	0	1.28357860779183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105496295-8	50.1114524827884	0.213823987674686	0.258128371492333	0.82836298249004	0.407464963946249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49739451531289	5.65352411392495
Merged-chr18-67164552-1	3.05974680221389	0	1.41630889337022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97863472-2	4.0928127680564	0	1.39805502225379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86677568-4	13.7402640325644	0	1.29096468014803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70755108-4	9.98388403669017	0	1.28238291573655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32990788-4	13.4916851682716	0	1.28235971025393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64303050-4	44.7023831869144	0	1.28076046663688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123026359-4	10.7822971048807	0	1.28391788860563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8933261-1	1.91330654635863	0	1.49984510545262	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31670008-4	17.8548996423808	0	1.28398409472111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50302669-2	2.53648448930259	0	1.47602498239935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39674384-1	5.7758338897938	1.15816953848649	0.735684530017592	1.57427469415293	0.115423957511453	0.689810579117298	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67679911908562	3.59992349551192
Merged-chr16-31165616-2	6.34831301027175	1.96002933368097	1.34288431109868	1.45956678284325	0.144409173994187	0.805854985809067	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr2-50669446-4	24.3219494092364	0	1.28052648342214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119377542-4	34.7134672535329	0	1.27652924857066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73034589-8	93.1119991998244	0.109006052158594	0.201759824202913	0.540276304210919	0.589006497316904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30070232890251	6.41811853894061
Merged-chr9-40521719-4	20.8057382571281	-2.78779257460806	0.510055558137131	-5.46566453425167	4.6117578938117e-08	6.45310345458286e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36485454494338	2.30923017122179
Merged-chr18-36700605-4	26.8386223269469	0	1.27942742845565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3742008-1	5.61243275691076	-0.396909528834017	0.700344690877737	-0.566734543723853	0.570894547870985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98183072684579	3.205015762469
Merged-chr9-118901101-1	2.24882909792849	0	1.47522719505686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61090861-4	16.3022949582702	0	1.28376397677744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121395980-2	5.13877198656179	0	1.42712714328325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21682061-2	3.86554787095327	0	1.4688342693421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36482236-4	16.9936195637683	0	1.30518323131056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36656113-4	43.7061445163432	0	1.28040178499249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24597575-4	12.373088203798	0	1.28455444797688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23716438-4	24.6917440871464	0	1.29452216867171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75716239-1	2.58318589043921	0	1.33420499008486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43964727-4	27.2888236746029	0	1.27855025294815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43209725-4	11.7509541002644	0	1.29155404883258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10134082-4	20.7880420367332	0	1.27818476405535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135404851-2	2.84309816820368	0	1.45088680432307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95668187-4	21.9524911730112	0	1.28074205498195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181536632-4	27.6508349793747	0	1.27935932734235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53839593-2	5.53360429426175	4.10225101302296	1.14060332111968	3.596562395589	0.000322450264531455	0.00790650468520542	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.05123609864809
Merged-chr7-80203182-4	16.8598369252116	0	1.29100637299749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71362028-4	13.2970701662397	0	1.28662759079491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89383941-4	52.6363236786737	0	1.27895292621928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50993833-4	42.8543849400179	0	1.27613326050453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118235134-4	26.6408507049989	0	1.28449383020217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83273946-4	18.5080325234281	0	1.27843605940306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131910788-4	31.0199059205733	0	1.27652940280812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124730009-4	29.7813209127811	0	1.2749526793043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8521633-8	130.566150799578	0.423775123710069	0.219249749037033	1.93284200128544	0.0532556644707831	0.387878360511346	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77769193478983	6.19339579127298
Merged-chr10-111545414-1	2.35122280661792	0	1.52932308033178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14680350-2	4.54548156238324	0.0449846528142229	1.155011311746	0.0389473699146901	0.968932349467226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	0.73596151290311
Merged-chr2-131204662-5	46.7943344997759	0	1.27792876125962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140766558-4	11.5194087155667	0	1.28110981457829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86977453-4	19.9161203970027	3.36248212919377	1.04007457276219	3.23292407799551	0.00122530122014652	0.022198096349236	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.60572551668653
Merged-chr10-6715873-4	20.1074047643377	0	1.29111960960224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135885915-4	20.3008950402573	0	1.28668605820163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104233279-4	23.7485751524044	0	1.27862433959335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46835915-2	10.9241874831984	-0.0969143485855462	1.08695721686147	-0.0891611436790321	0.928953845196935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.989749054481134	0.994591904006138
Merged-chr5-9087087-4	23.694081806653	0	1.27837671625661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43921300-4	30.9152589264065	0	1.2746942263493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100443918-4	44.3388754210291	0	1.27946183602386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152336729-4	43.7428565960448	0	1.28017822725654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84752239-4	33.7605618795448	0	1.27374056405753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120582788-4	13.8553378853435	0	1.29122682433151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191072685-7	75.2212750909208	-0.106434381330008	0.236584753883953	-0.449878445600156	0.652798090249898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75930411631069	5.67538147086326
Merged-chr8-14879311-4	11.3032610216139	0	1.28393207212384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167773077-4	48.0557328911109	0	1.28115465423711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23882035-1	5.57879540884964	0	1.30949258773312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105599034-4	39.5704456401571	0	1.28185320215582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17550167-2	4.05485141175078	0	1.39172808115197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99360337-4	23.7852710350044	0	1.27740295860155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30593888-8	78.0448442844101	0.225029101042439	0.184471482895977	1.21985847085825	0.222518531288642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40370636556389	6.60862188224994
Merged-chr5-124623123-4	16.655691470263	0	1.27961278903593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117195754-4	16.9150167820937	0	1.28825726393604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97412274-4	8.11790711002014	0	1.30525992927867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89569204-4	31.8720224508632	0	1.27997483022999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98896170-4	15.7223026745181	0	1.28458074516104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61920593-4	39.9341905014226	0	1.27802591756742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57952560-4	28.9769109481577	0	1.28143155922119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122577568-4	17.8669525978957	0	1.27702529799822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98949840-4	26.4750771696746	0	1.27533385421094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90145380-1	1.92831861011372	0	1.53983184175637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120938960-4	22.0066449808626	0	1.28945292704901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64916071-4	21.992061384562	0	1.27761435865213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124622163-4	48.3962938576723	0	1.27742004963994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104239740-4	36.0509083708195	0	1.27334559362371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114066894-4	26.1137452940949	0	1.27872412209117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53944404-4	16.890616746194	0	1.28366643297964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170002749-4	17.2132593627398	0	1.28443739151991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12041087-1	2.45600445048868	0	1.36757505720434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13361406-4	32.86867542146	0	1.27780432523307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117482016-4	29.1496738139953	0	1.28256448818028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66818163-4	30.1522973856028	0	1.28621377694321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125131555-5	32.4482934290706	0	1.2849356380261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61251864-4	15.2260505979099	0	1.28382182980384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105787207-4	27.1343108623311	0	1.27767812859495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149957688-4	24.871497488251	0	1.2772486719802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128704329-4	12.6261582852782	0	1.29751343073295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105742662-4	13.978614135065	0	1.2834904161155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13938867-1	1.84082187299174	0	1.48844669830372	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54516484-1	2.25629824583919	0	1.3482484477643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80933848-4	33.8085221511957	0	1.2918029665467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17613484-4	12.8598602098322	0	1.29486295875946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74994309-4	14.1280362416604	0	1.27970148950072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46845221-4	25.9819902973069	0	1.2863191180575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4107814-8	196.210307323478	-0.397705081322666	0.226453853388825	-1.75623013418014	0.0790491212692953	0.520877672528322	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.36190353332982	7.94689707707997
Merged-chr2-91395897-1	2.83715279106335	0	1.39197179712677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111160338-4	12.773613172192	0	1.29494342603373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32331236-4	25.2740118692581	0	1.28110817486137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167963899-1	2.36103975554037	0	1.44049584714419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149272660-4	12.1177014536029	0	1.2831612125029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89257215-4	29.4608360281285	0	1.28688449173606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53080384-4	18.7966457308601	0	1.29511783499359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27302535-4	13.7091491656058	0	1.28306173341734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96015948-4	28.3716502792738	0	1.27968330275451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148464052-2	2.64425764356417	0	1.42103570065023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80065327-2	10.2444221748745	0	1.30164549899874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96126506-2	2.92086625460592	0	1.43027617764053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37532629-2	4.59159351867604	0	1.38154107784918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25487089-4	20.1730296254574	0	1.27864943004604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3377146-4	32.8532941199006	0	1.28021427373003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101863234-1	2.29424326450924	0	1.45540167257318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72379181-4	37.6249732865886	0	1.28420358675546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51865192-4	31.3612639728997	0	1.27592534410164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86169926-4	45.4937540021629	0	1.27476464065106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180403830-4	107.331430931491	0	1.28061167875878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145274063-2	6.93736292917868	0	1.43719655118696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167713279-5	28.0456791261463	0	1.27893317773496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144047085-4	22.0729722140535	0	1.28061814359754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-118197301-1	5.9092762349046	2.25969288332682	0.860472306813256	2.62610762186589	0.0086367505057599	0.0989422858948147	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98119991298309	4.31832503957823
Merged-chr13-42156137-2	2.71909088066267	0	1.93745608464463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120790873-2	10.9730603789862	0	1.31267562667175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90232966-4	29.0558970549682	0	1.28105366634106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3929727-1	1.872807634035	0	1.5094110878142	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75769456-4	14.3388035490479	0	1.28418169700416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60910934-4	38.1086012381149	0	1.2805257263216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54998478-4	9.26290523516849	0	1.28939259152611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23975235-8	77.5033443150768	-0.137290041508503	0.178319480365501	-0.769910506844794	0.441352980915239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52436169700182	6.37667545647467
Merged-chr2-12406893-4	19.1552148207545	0	1.27875288332723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33824252-4	37.8881302874674	0	1.27414629909107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53250518-4	35.0952884325641	0	1.29238702333813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60760606-4	12.0866078028429	0	1.28806769837271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111456095-4	21.8142666255383	0	1.30751520746726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58806122-4	10.6117863206587	0	1.28488745407654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96494162-3	11.6688723213837	0	1.31594622471093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99906329-4	30.7833172004036	0	1.27828926069046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40559299-4	39.8333741206905	0	1.27684552335751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97942746-4	14.7588130751424	0	1.28136221639711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86895048-1	5.07289300940061	0	1.3035526840333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136852645-2	5.1186431447815	0	1.42776075746249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149325983-4	17.8119641391801	0	1.29532692786154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76217306-4	15.2549935465403	0	1.29693663372078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142493668-4	15.9944976571366	0	1.2846705161481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44962397-4	13.9590834287461	0	1.28401889095734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19871430-4	34.739123144302	0	1.27313697598687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140207828-1	2.85948813413434	0	1.35396582622607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110672809-2	6.90493538101918	-2.28961102320325	1.15524193327047	-1.9819320587865	0.0474868452748982	0.357332495547385	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11290838560194	0
Merged-chr2-165933994-1	8.28309406631264	2.19760703082517	0.566290607197329	3.88070542384855	0.000104153930564254	0.00326891473492366	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04485845485378	4.13456686459376
Merged-chr1-180771948-4	14.0547121769424	0	1.29702208133041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107497009-4	30.4309427614506	0	1.27524742909819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95009970-2	3.16829382713722	0	1.42321457450159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88509221-4	22.4855283843557	0	1.28078993117683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62460526-4	26.3303953895801	0	1.2776168312541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21737808-6	28.6296435042125	0	1.27598789738175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152540710-4	40.3630524488029	0	1.2773066292124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148452942-4	19.948075888529	0	1.27660087911895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47070239-4	21.874518012187	0	1.2824832848924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106695945-4	23.9835601017345	0	1.292061360021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32276986-4	30.9324255052751	0	1.27638938461854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113594566-4	34.6146972388472	0	1.29352187093133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99168232-4	32.6040222488547	0	1.28521782469904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25167632-4	14.599044090877	0	1.28288688084089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78362565-4	31.4337516467448	0	1.27866842720832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-9460-1	9.02208859920651	0	1.33743332513332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26722852-2	10.2885958833323	0	1.33178496508704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91841138-4	36.9442343908869	0	1.27659455588042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125454668-4	24.1445634385488	0	1.27824564028212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80785927-2	5.02371144347637	-0.197282744147572	1.1661672928477	-0.169171906430184	0.865661426692478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.705103018524376	0.563523181795778
Merged-chr12-8519696-8	94.3473919063298	0.351875102620111	0.184959622173684	1.90244280608276	0.0571132893209511	0.409430756535318	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9418310571376	6.24896736677098
Merged-chr8-70003296-8	70.7623813131131	0.510162180074647	0.209854852126606	2.43102399065266	0.0150562175922375	0.150047825954301	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85587366852559	6.35270756536393
Merged-chr12-104231016-8	111.233326359427	-0.20629620217269	0.152732586977422	-1.35070194419732	0.176790929251366	0.93196031484832	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.37763221889761	7.18804985191931
Merged-chr2-6731026-4	11.4256236854153	0	1.28689604913645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38373909-2	8.06825158846639	0	1.34883860082103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34171904-4	30.7358090542786	0	1.28066808526336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39968264-2	5.17415850266597	0	1.33281962135023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93863543-3	13.8636825183107	0	1.29105913494071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84350463-4	11.4050685468134	0	1.29675937096841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67636725-4	12.7437006366485	0	1.28418674633031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5211862-4	16.7911459272694	0	1.28072184192086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106230172-4	23.3498009926075	0	1.27690135346428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105925842-5	36.6429582955284	0	1.28530300100332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20544656-4	26.6029222447612	0	1.27565679950919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56740332-4	22.9926645231846	0	1.28031144780898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32563814-4	26.5619766953476	0	1.27554876776178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31057479-4	21.574972479672	0	1.27733275411618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113870578-4	28.4077282329645	0	1.27558425981167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44063358-4	17.3763166187163	0	1.2843669349804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106270050-4	14.9354873030833	-0.351543713574452	0.641790212075073	-0.547754869052647	0.583860231153475	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31711927676982	1.85212475157961
Merged-chr4-151108606-4	12.442207564712	0	1.28356265268393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167751768-4	11.2664897399332	0	1.28263104995165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167229496-4	48.1136579280566	0	1.2772216793424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66436990-4	13.6295089687759	0	1.29093316838446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75180721-5	29.7009539063939	0	1.28422755372679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32174305-4	16.797921888077	0	1.28847927242712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138136610-4	31.7056769419221	0	1.27750375553176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36714371-4	21.6488811883008	0	1.28223558110452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12320891-4	32.6587092844895	0	1.28448402009725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25828645-4	66.0062882384215	0	1.2757136249114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121675147-4	29.6599603168753	-0.882860347937874	0.695588028974845	-1.26922878365091	0.204359477884573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16897215294138	1.62581156516825
Merged-chr10-37190229-4	26.5747854609714	0	1.27446644395337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38198362-4	11.081141879638	0	1.3057096482327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111437559-6	63.5803707707455	0	1.27693101996782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118811325-4	70.7630632845716	0	1.27834585444036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78247237-4	17.4007052136206	0	1.28573683627689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107489825-4	13.7431961539641	0	1.29551367638989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56793212-4	48.1094187541564	0	1.2754761777031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118052374-16	249.202326914449	0.971810568900441	0.100392859633876	9.68007657561054	3.66441420613337e-22	3.99091351189985e-18	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.82556115519858	8.79761495871882
Merged-chr1-87828486-4	30.968974962576	0	1.27969179614232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148534592-4	49.6129781811688	0	1.27905512452737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84531464-4	19.3774139673728	0	1.28163462675122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53589920-4	20.2230657635525	0	1.28251714200445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25385890-4	12.6733082927076	0	1.28799180903753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33876573-4	23.3785386418841	0	1.28099191165496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98046594-4	31.6229676951478	0	1.28011298406931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29043705-15	107.618481879018	-0.266148709406785	0.14653149821867	-1.81632422136031	0.0693206518582679	0.471906169010353	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.02281906040016	6.73719115166082
Merged-chr5-21386580-4	26.0394061743156	0	1.27887971275505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65670520-1	1.42301789168163	0	2.4270639917466	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86273526-4	22.0874368084617	0	1.27928992799013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52563787-4	46.1948125121894	0	1.27948285772035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31187275-2	5.32339678044327	0	1.38505323956194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-65037-1	5.50390569098502	0	1.37159651126968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60821833-4	36.9988580387433	0	1.2744137926964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26698744-8	237.01003211503	0.491748709166392	0.140195712867946	3.50758735133064	0.000452189870801236	0.0101962730494747	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.97249115137721	8.46397307860126
Merged-chr7-46830926-4	27.0007263445763	0	1.27560595089395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85945134-1	2.27764181132995	0	1.53758131584105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86652782-4	21.38732148867	0	1.29229301786141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29478478-4	19.3212149681578	0	1.27914915203549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56353457-8	156.979198970132	0.519407948000158	0.131494393134878	3.95003874779196	7.81385425129941e-05	0.00260828857545564	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.31417472948019	7.83204218902093
Merged-chr14-55697449-4	17.7649512684309	0	1.27871416714136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66476530-4	25.5665109912681	1.55007096162253	0.567359843409811	2.73207732205132	0.00629363686561065	0.0777583654037045	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9408333308454	3.28321719566487
Merged-chr11-97533271-4	19.1441043305136	0	1.28774938421995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111933707-4	16.5808489544854	0	1.27817811439693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94497963-1	6.3582306950372	0	1.31157386118192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32186985-3	12.0578868434877	0	1.31001605919171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38965649-4	12.0104577638512	0	1.28842600220238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61452018-4	38.5004427338228	0	1.28106134689291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84698863-1	1.49793363801837	0	1.79244200226245	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132515641-4	49.0540370810587	0	1.27884537524481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137921779-4	20.5188885366754	0	1.28180859805281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87987029-4	19.4734436814768	0	1.28531351444719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43885218-4	18.193357926966	3.08772749553007	1.0744511647451	2.87377183518861	0.00405601864726826	0.0555574453515809	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.735627456805112
Merged-chr13-98872612-4	17.6760382917174	0	1.28495102490169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59397698-4	10.7725826204817	0	1.2843833633396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17807616-4	19.0132619741053	0	1.27862041687436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73029940-4	37.7128716832387	0	1.28576911432027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144267797-1	3.65037669274026	-0.609571739469585	0.844839776735454	-0.721523484399647	0.470587497004975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34295007491268	1.96617270997603
Merged-chr1-134094022-4	52.1920135864915	0	1.28000137153404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-119007572-8	171.050975361383	-0.154367168381023	0.193417936913908	-0.79810161789562	0.424811522652466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.2088835513077	7.04516368723579
Merged-chr7-43538728-4	13.3861334274324	0	1.27950206261425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116682463-4	30.1789397000394	0	1.27598883480367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96393328-4	26.8840536287789	0	1.27802830294208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67815657-4	39.9745162589138	0	1.27450009162987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131103981-12	94.8595721740521	0.0538226192034856	0.200757345420456	0.268097882499702	0.788623975711904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31263747130105	6.35413054578403
Merged-chr8-88662484-8	197.931952878456	0.349519233407211	0.166458071423372	2.09974337932967	0.0357514214089028	0.29173481311016	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.62486647877593	7.97154531013355
Merged-chr14-30613525-8	71.903448685044	-1.29023336081319	0.236039276032042	-5.46618080898556	4.59835302264555e-08	6.44815400467373e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.09442926146863	5.78109499336258
Merged-chr10-56879889-1	2.2986193182542	0	1.42296745749743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167496578-4	45.7255259841804	0	1.28682752291018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133458913-4	36.0421685390096	0	1.27994315124622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93083800-4	25.7304732445302	-2.64875917534823	0.436547986190441	-6.06750977930917	1.29908710316102e-09	3.19135886628421e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84326824185739	3.21494452119183
Merged-chr3-96251954-4	8.49656404175917	0	1.30865941301622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52047197-4	73.3275327760121	0	1.27526998902594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3647238-4	23.8380641116805	0	1.27674499947421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132010944-5	26.2021608406238	0	1.29234160662352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94961476-4	11.9942694074065	0	1.29685034505325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99181714-4	49.9326022263555	0	1.28099289893934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-7128-1	8.74177634127865	0	1.3153570173556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60936156-4	9.31786279052229	0	1.28800195098965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15244804-1	3.40448294323535	0.0906307434637773	1.2612173920616	0.0718597317434952	0.942713536576791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857056700897293	0.61242769162773
Merged-chr12-111599717-3	7.70933514678385	0	1.35171103274465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105495345-8	95.4889350595517	-0.514043783438931	0.172688355665726	-2.97671363802877	0.00291356008793544	0.0435057469577083	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.1528950037836	6.6336606145073
Merged-chr6-22124748-4	15.7177945265247	0	1.28655349578603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142746956-4	22.7985957145621	0	1.27956354223249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-17608915-4	18.539940648066	0	1.27545815919979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76552539-4	42.1034275046501	0	1.27443609039295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151210214-1	6.57892173633866	0	1.30642428890592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40733756-2	5.86697592713148	-0.713239932852043	0.76258650699324	-0.935290522860465	0.349638598035394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65547406819763	1.62306943957144
Merged-chr17-33799460-4	18.9952599027608	2.45223762731707	1.15389011892374	2.12519163402172	0.0335706258319714	0.27892004012918	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr1-39594376-2	5.09576151210517	0	1.35600777306302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118617464-4	61.2213919222856	0	1.27506807432468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21136108-4	20.4277418777765	0	1.31813626413236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23869178-4	33.0245202912645	0	1.28650129618043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57673729-4	17.0792014190005	0	1.28855833475822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131514926-1	1.35434444920364	0	1.53091716047313	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14996658-1	1.85135993057451	0	1.44484116835809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153566314-4	17.0740293377901	0	1.28195380759073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154065553-2	8.2397084028758	0	1.32249055497414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44729172-4	15.3595489645863	0	1.28603543476797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106639178-4	21.4990107736579	0	1.28338109730681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99375882-4	62.5308244941456	0	1.28149517298331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16254380-8	96.5905376977986	0.0843614470253524	0.223111094454425	0.378114083621176	0.705345846430329	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82875495000024	5.92841073130971
Merged-chr6-31080835-4	23.5103799959607	0	1.28226224814427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75794391-8	73.894355438199	-0.487642157759618	0.256122878894375	-1.90393829658897	0.0569182207223953	0.40827420980523	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47087864895174	5.93392822003256
Merged-chr3-116185420-4	13.8343542150098	0	1.28190089757615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-96551192-1	4.3170897300598	3.78868093707314	1.16980076189372	3.23874035689622	0.00120058813419547	0.0218412116417419	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.543422078079461	4.18352870898958
Merged-chr17-86162098-4	12.1306401371639	0	1.29401533274904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-24349691-4	12.5154980056953	0	1.30122435668736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36627044-4	49.9882016867042	0	1.27948091094863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106660821-2	10.9262403380579	0	1.28858734867994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106958396-4	15.6807141463399	0	1.28785918744406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60298426-4	16.4616479796785	0	1.28100224350274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108503846-4	56.654035441086	0	1.27615981282755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115570526-4	12.1492444200614	0	1.30244352337579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27311800-4	21.8075753400136	0	1.28276197730623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72141370-4	27.3062256781421	0	1.29564759221806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23868501-4	28.778947434717	0	1.28010041859299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77961576-4	42.115345441839	0	1.27458413920276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166699535-7	42.0516818938822	0	1.2803020702423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23314965-4	48.2318803661716	0	1.27610982457963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155076103-4	28.7461504266468	0	1.28059548793295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115332219-1	2.5974487578856	0	1.52064391366953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56753665-4	15.0567380181483	0	1.2876521631438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52060262-1	5.95770819305463	0	1.30943444139396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11438434-4	10.9209932733029	0	1.29591434720879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128372387-4	14.8296432153267	0	1.28038173033845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62373106-2	4.85136690882731	0	1.37551186842844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20204511-4	26.0737062223357	2.38283472476854	0.688225580995558	3.46228735253001	0.000535604974828652	0.0115892856573355	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03916794530514	2.53628445873148
Merged-chr18-67699750-4	22.2797954360105	1.23054426705444	0.521620009755319	2.35908179142066	0.0183202173854306	0.175073548591452	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94408389350955	3.25185101899695
Merged-chr10-17870163-1	3.232877961555	0	1.4343788278134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155217563-4	16.2516542378126	0	1.28142508369739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178217334-1	3.3884817935005	0	1.50561018725386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6478488-4	42.9839789190024	0	1.2768498171572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107949837-4	17.9884115954197	0	1.28281305027511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134452521-4	32.7586800145429	0	1.27658735819748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7868203-4	23.8628293088959	0	1.28705536856709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108132697-4	10.9882662436405	0	1.28481475246396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118053246-8	110.098343197642	0.630261642465408	0.150203414945184	4.19605401578531	2.71605497417266e-05	0.00112331220469802	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.8971448937389	7.50495238761296
Merged-chr19-60161144-4	18.376785719598	2.45172932588664	1.15563879333514	2.12153601975494	0.0338767200787287	0.280535819321329	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.992113827166316
Merged-chr8-84737799-4	25.1734644455958	0	1.27739598127561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80619989-4	12.5538223999174	0	1.28705768260624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136553944-4	20.267137318695	3.37057216478306	1.04564548022785	3.22343684213945	0.00126662226860001	0.0228516562020806	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.58756080918295
Merged-chr4-103359242-1	3.69322774334609	0	1.33584848872242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33203997-4	16.9672604863407	0	1.27981772941656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28327425-1	2.85762403962107	0	1.49939049229327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76053709-4	19.1837272210217	0	1.29044067417083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129429578-4	20.0945970750642	0	1.27701542380531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78809015-4	20.2305226232433	0	1.28705107905464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9955078-4	15.7208245597109	0	1.30536142737653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106231503-4	37.4868586040786	0	1.27782540198683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-42880625-4	18.4431657681223	0	1.29228440924102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120032538-4	54.5845490382805	0	1.28638543307149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69544254-1	6.4104782177671	1.36926740181629	0.930999564845088	1.47074977639128	0.141358799337288	0.795353203159497	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96611858984845	2.84686254141174
Merged-chr4-36014305-4	37.0301822888383	0	1.27633953524916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9783923-4	19.0828400849748	0	1.2776938385644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38554200-4	35.0113855583025	-2.9305047902077	0.558800068995378	-5.24428136788927	1.56892621563495e-07	1.80220868774698e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69988080260712	2.24736579827037
Merged-chrX-21695920-1	3.58562664871646	0	1.45652889168452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29649394-4	13.6459768129637	0	1.2874581327255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71125642-4	12.6286103296595	0	1.28047972354434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180764092-5	19.6803511361166	0	1.28611805735766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76522656-4	16.4111628383298	0	1.27903605124681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117417519-4	30.7479341065681	0	1.27734376212322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191216280-2	4.15672273958351	0	1.35515614451364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55814993-4	14.1261238592044	0	1.29075425909951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127786040-4	12.787005437689	0	1.29214444074822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132593079-4	33.3887471273504	0	1.28973964731727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64887241-4	25.2280712891588	0	1.29081856492265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76223633-2	10.541023357018	-2.08759108925132	1.00931666948355	-2.06832122402129	0.0386098272850091	0.308096603208543	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39442084199912	0.733321818366247
Merged-chr15-58746710-2	5.56292347314769	0	1.31384931881324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44664096-2	4.95385838764227	0	1.36379730434273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-26697297-4	32.7347784867001	0	1.27887642191517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63124342-4	23.2025997506125	0	1.27984120859265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145729720-4	12.2470369207113	0	1.29146126762554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15758690-4	65.6379812470109	0	1.27643753069535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-74305931-4	12.0724701468905	0	1.28528835881482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124834729-4	47.9619242104566	0	1.27369513949834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3782730-4	26.140939749969	0	1.28691698209907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111810015-4	18.5822856302825	0	1.2808493331053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97211284-4	30.2587440129961	0	1.27845161151911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76964208-8	110.137735346552	-0.503769810912986	0.150069534139396	-3.35690927410388	0.000788189713821536	0.0157815376279023	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.54856265565701	7.0307590136709
Merged-chr7-19501165-4	28.7217604448507	2.01053586834579	0.66480704659174	3.02423970782678	0.00249258857471916	0.0384696960329707	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.615449858980057	2.94640134381309
Merged-chr2-128297052-4	22.0811992801388	0	1.2818948143853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106375617-1	3.80538373914755	0	1.36093719766898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27664321-4	46.0766891612331	0	1.2798424879458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134799502-2	13.487319248035	-4.31574406545229	0.676778498317937	-6.3768929955349	1.80716630042619e-10	5.76054093012927e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82020573996782	1.24302299519605
Merged-chr10-94967404-4	18.4016174428552	0	1.28769240854298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59904166-1	3.9383910803052	2.12134411125915	0.865307718717119	2.45154881364538	0.0142242892038478	0.144130935387601	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.928670148753437	2.43491183200938
Merged-chr2-136937057-4	38.5375631526354	0	1.27778096073268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149171696-4	18.2381215100619	0	1.27822987943318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153147417-4	19.8251578872882	0	1.2807808637991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113762549-2	4.12625385529994	0	1.34413760891021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65684036-10	157.640960618756	0.568664571848608	0.165439141203206	3.43730369798116	0.000587536427047766	0.0124774635560167	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.65399207460579	7.228327430816
Merged-chr12-69500762-4	13.1302008426631	0	1.28306278945212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7847218-4	18.584385793249	0	1.27959802295561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25680853-4	18.9287445901119	0	1.29163889111197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63231005-1	3.6274392413457	0	1.44953332056217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109023482-4	18.2287513944012	0	1.28035494160415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24516581-1	4.86858954809398	-0.283434193272919	0.835133684131691	-0.339387811386883	0.734317599407921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94105578790393	2.30491330480933
Merged-chr11-113730159-2	3.08140021382923	0	1.44925068484734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99212723-2	4.42607046078572	0	1.42499540142169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154032856-4	49.0174651075446	0	1.28172506022498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64308760-5	28.7494178643246	0	1.27988052810728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98684317-4	28.4181732581166	0	1.2797105979367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89563608-4	13.770399163639	0	1.28229003710981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82283357-4	30.1076338439264	0	1.2752465719365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124477578-4	14.6136243313424	0	1.28734667189641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25090594-4	21.7068876448303	0	1.27627509645787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100859308-4	37.0994510977171	0	1.28339205132662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89835642-4	10.7435011912915	0	1.28760936931761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4232863-2	15.7485678427391	0	1.31990797810161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102924847-4	23.9046579005204	0	1.28470827987806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47683014-3	11.2960062369068	-2.19264197054251	0.758820481970752	-2.88953978264786	0.00385806186676079	0.0536173778701299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35955932134979	1.35032549026822
Merged-chr1-59316192-4	14.842508622837	0	1.2902995108864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113486636-4	53.0157109554765	0	1.27674258964131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37234891-1	3.66688839713279	0	1.40040319599826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84222807-4	13.67816198052	0	1.2934028303665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132224501-4	32.1208032103189	0	1.27612152072968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12314213-4	30.5602763834866	0	1.28365833486443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102219001-4	24.8851594585061	0	1.28283374303013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88551176-4	23.310311347317	0	1.28130659608705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96706144-1	3.21702406605102	0	1.37576666461082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122748013-1	2.29286159888207	0	1.52971227221517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85533070-7	111.024808968031	0	1.27562352319293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139286754-4	17.7954216042451	0	1.28464443073559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180762845-4	23.5295642576049	0	1.28095002465881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158175652-4	71.05613080782	0	1.28000067492946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41937378-4	10.5743933141754	0	1.28539016750948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5347918-4	20.8061817148125	0	1.28215000009244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4567146-4	17.5981588244517	0	1.27950984542691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114894347-1	4.79764233481466	0	1.32664943288473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120262902-4	27.2567018837151	0	1.28154536116102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57594411-4	33.2132544745521	0	1.2746779290053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127275428-2	3.70766971873486	0	1.44180917929366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46873976-4	29.1681248052853	0	1.28175265021012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52113751-4	48.5937604994521	0	1.28212438561986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136458703-8	59.0690106606964	-0.140784613535807	0.288177473051014	-0.488534416119629	0.625171354349748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29059147208423	4.91758734820948
Merged-chr6-125481912-4	23.8904097853461	0	1.29111826244179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120002117-4	64.094535690911	0	1.28837243035755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105778594-4	13.1902694509049	0	1.28971273966195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50813926-4	11.8274491681884	0	1.29254136530339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52383095-4	22.2811393227325	0	1.2777235511524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97319795-4	15.5140749400066	0	1.29220465444967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180417341-4	37.5340805355531	0	1.27345128483483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58039682-2	3.8964046064703	0	1.59339000568092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55556437-4	24.1350100634513	0	1.27689106494272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170322270-3	25.8606680642971	0	1.27817212468068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4678566-4	61.4240751147263	0	1.28184275610597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78136167-4	32.3846998450813	0	1.29899647061759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119338083-8	69.7835736883614	-0.0427659450720747	0.208777351651725	-0.204839963404725	0.837697162695671	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28160397652626	6.20968728234396
Merged-chr2-142758230-4	28.46674560366	0	1.29597656883401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113466646-2	3.46375448871579	0	1.37497657764069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43921586-3	5.83223687311737	0	1.3142261237547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21991880-4	18.1738433107386	0	1.28073188410811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73542187-4	27.7806083744881	0	1.2869847376196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140175679-4	14.8087939475104	0	1.28782190342582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87956729-4	12.421457068764	0	1.28407918819303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75304663-4	30.0272703182162	0	1.27654487460547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45279660-4	39.4600453583548	0	1.28604606822008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5367110-8	97.9281663005016	-0.528309333375335	0.24832719002515	-2.12747276414568	0.0333808219444925	0.277696141411178	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27442088484463	5.72716756427896
Merged-chr3-103213715-4	19.7540485624674	0	1.28301042163485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103678323-4	14.333013257394	0	1.28556183390451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36130492-4	21.0317869003499	0	1.27891765500342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46432079-2	5.93032989277397	0	1.3589625030809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115859741-4	19.367878032887	0	1.28769683915424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71458165-3	17.1893414720919	0	1.28335474221886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165682653-4	19.3367735782993	0	1.28562870919317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59828570-4	37.564257191852	0	1.2763137212946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123713982-4	25.1083665170848	1.93673915377144	1.24230954835775	1.55898274816584	0.119000463439392	0.706093188405567	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr8-104565067-4	18.3046981690194	0	1.27917488739588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75179455-4	18.5480012213067	0	1.28402885260713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-98322422-4	13.9056282866655	0	1.28116429669203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25862131-4	12.2812427756201	0	1.29388867384882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98667885-2	3.26538686222687	0	1.36615552927011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116975962-4	24.2998840859316	0	1.29047836862272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56472997-4	22.0886665457736	0	1.28175406458168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42225327-4	19.4011566979189	0	1.28198017647665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8746881-4	18.8627701267117	0	1.27897711660141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41739299-2	7.21802915984651	0	1.29466328224031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73671711-4	12.4229524062925	0	1.28051935502839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_GL456389-10666-1	13.9617432130539	0	2.43325100441553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116724673-4	16.6855181674904	0	1.27883454643086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11465415-4	23.6956384630679	0	1.28090827881658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120517786-8	69.0622204473449	0.0623054108857714	0.22113852977621	0.281748327389279	0.778136495057282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63040309912485	5.68374871479026
Merged-chr8-116581491-4	32.5282041760526	0	1.27851618953613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22096212-4	35.1141487290882	0	1.27939874841848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22847850-2	4.53624169524211	0	1.41715632904994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123928605-1	4.15997960393281	0	1.30659806048847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41345662-4	17.7930036444991	0	1.28234194762724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98997216-4	20.7248085021197	0	1.2778470083459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126135071-4	34.2163665221683	0	1.275571689157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119812086-4	28.1732932632382	0	1.27901428412849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25776932-4	43.8701804702866	0	1.27860691778539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8647352-12	140.506953851984	-0.256303294375209	0.219256991917537	-1.16896292398103	0.242418569549643	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18848228195175	5.93029190213592
Merged-chr14-26643430-4	16.9633707920456	0	1.28322101644758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99378205-2	7.95005366757397	0	1.30169417030765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30211867-1	8.57922359498664	0.795397053203855	0.856956855011322	0.928164642773464	0.353322171987544	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.986465049575574	1.41959898789419
Merged-chr1-37478083-4	12.4117920019531	0	1.28071478265266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102713538-1	3.79572145555236	0	1.49455737347906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36709640-4	42.9945231830776	0	1.27956318818513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11065446-4	13.3184666531318	0	1.2847297783784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96914783-5	39.1392132041231	-0.330485042400513	0.277872963215155	-1.18933860486679	0.234306449757422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.33755442552828	6.05528016827462
Merged-chr10-68125195-8	81.4383590681415	0.410286283941033	0.199935552018368	2.05209268586379	0.0401606556360984	0.317178898138323	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26482730130688	6.77336547427845
Merged-chr7-104397480-1	7.73209749392282	0.708112901677116	0.66298385690536	1.06806959822884	0.285489118366998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37568972011232	4.10471612392702
Merged-chr7-128048976-4	17.6352562292586	0	1.28552943370678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77211428-2	4.71678673058033	0	2.07252904298665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184049249-4	14.9528306026483	0	1.2808060408427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7250788-4	18.2147661122616	0	1.28300606536394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76110482-6	40.4402334483091	0	1.2760175951101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61275080-1	2.27138955309132	0	1.37188022687024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34327014-1	2.84386032821112	0	1.35255669590781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22286555-2	7.80680275945602	0	1.36487480331039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27542850-4	18.0152307610971	0	1.27930489231464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167266618-2	7.56283546114312	0	1.29650076627886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180365297-4	34.0259615340088	0	1.27847580397152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117055315-4	39.5731067206928	0	1.27623086226037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110094498-4	50.9208214996665	0	1.27765848607319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48908918-4	19.755838134912	0	1.28541262409143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8777734-4	21.215710033379	1.32427853652856	1.280871920647	1.03388833433059	0.301188369246909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr6-59185458-4	49.1591917362139	0	1.27594753850787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86832445-5	16.9043729257153	0	1.28338250996887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107583001-4	42.7644192056591	0	1.2774607909546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134700982-9	136.264485183665	0.278907737072425	0.178268405145329	1.56453824133925	0.117691219564601	0.700295978297982	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.97075348776514	7.25412240400015
Merged-chr2-84511712-4	23.0376195252967	0	1.28238127069758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144140043-4	12.07611037971	0	1.28960726247559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79599393-2	3.65032729864067	0	1.37885557854389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126582728-4	12.4837851328816	0	1.28598387710834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114336267-1	1.91869860150884	0	2.09085549280968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43380114-4	13.0294961550321	0	1.28445199141877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66474033-4	22.6726049803005	0	1.28231081430057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64923133-3	24.5744191394456	0	1.27702167698399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70601934-2	3.83208422280928	0	1.40573437329418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90235517-4	63.1530765161313	0	1.28257875300261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34858877-4	19.2600398610578	0	1.28377697926287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84993740-2	2.8362197659607	0	1.41954065029939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97206682-4	14.4571817709459	0	1.29580584272222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122762361-4	19.540064611854	0	1.28451882627413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191741220-4	10.6598987568587	0	1.29998455512781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70212778-4	34.3987143263569	0	1.27726013013259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105718419-4	54.7945456879047	0	1.27731860793248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23999639-4	23.8100117328788	0	1.31917406851348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184441390-4	20.6509909142864	0	1.2807899079139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82824487-4	26.9337588873479	0	1.27589698590767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137672062-4	28.6880655983898	0	1.2883244128583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8224951-1	2.80567578118368	0	1.35021449440508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63166609-2	2.36920501763559	0	1.74513869595908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24950416-4	15.0991593970953	0	1.29946513955027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32223950-4	66.4943366870086	0	1.28329417357151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133402602-1	4.45362408675231	-0.370927204237876	0.866777220234981	-0.427938339377815	0.668696013095701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47926801113557	2.92435819090246
Merged-chr13-113485748-4	67.342116086565	0	1.27775992974606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17221699-4	22.682785603534	0	1.28020913596084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6366067-4	22.4563237950798	0	1.29751174835038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99390894-2	13.0399958544508	0	1.30724098740554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153784216-4	11.7621256547669	0	1.28833581834292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121584363-4	31.4205749259668	0	1.27803060620977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46141070-4	17.1249077623165	0	1.2848910316786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5571996-4	23.0042209913005	0	1.27746857664287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8811899-1	3.48651450365008	0	1.42311113893771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136689090-1	5.40781428862682	0.995771752693046	0.652347910836349	1.52644277103058	0.126899632677963	0.73788782674623	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59746173329791	3.79643371288431
Merged-chr13-30565128-1	3.05653768037968	0	1.49296357891571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73491713-3	14.2989607624649	0	1.30582666316845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59343020-4	16.2110878812248	0	1.282658967495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116627339-4	18.3129840250205	0	1.28555904108624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28319809-4	10.2780147376592	0	1.3017956122963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109299060-4	37.3047943677922	0	1.28043713108254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25178026-4	11.5713147800624	0	1.2836761430508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11781901-4	18.807207797991	1.8183316354609	0.732249416383503	2.48321349908537	0.0130203024582672	0.135180280336499	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708251031414953	2.44109637636472
Merged-chr4-133118319-8	95.3467295518831	-0.90595229978124	0.189668130863046	-4.77651303705526	1.78360994857131e-06	0.000127938282875237	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.06938850719636	6.14981964360119
Merged-chr5-115535107-4	26.437104453343	0	1.28247013693671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31801017-1	4.67998427427404	0	2.34197035329823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141477814-8	63.0855505614996	0.433420346075567	0.201688124254156	2.14896314633476	0.0316373214621979	0.266620119714829	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49966637736413	5.90566824699878
Merged-chr5-105624378-4	14.0316468662481	0	1.28749220986124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128840599-3	14.2213671403406	0	1.30207574078846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72796504-4	21.3590452594781	0	1.28216821806231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72144538-8	84.1999860649022	-1.18777881002393	0.205005578780016	-5.79388530347505	6.87764374325386e-09	1.29517725661864e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.39407695164495	6.16089816875209
Merged-chr12-100396896-4	18.4263338726727	0	1.28089830322379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63757874-2	5.17421218064723	0	1.43209496366331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35870831-4	11.1160832143684	0	1.28443942654981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170795993-4	28.1483246840243	0	1.27804284290093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-123934567-4	44.8363795514539	0	1.27665639090719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55658721-8	66.2218858223808	0.514627076002387	0.218218871528584	2.35830692550795	0.0183585070200015	0.17536252005979	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55313607462024	6.05588484538267
Merged-chr18-82635663-2	10.1211919496382	0	1.29696722139893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8870620-4	69.7529281836443	0	1.27838039359224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75195710-4	28.5955757681675	0	1.27754261990582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100183301-4	30.265916963294	0	1.28056729611072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92986042-2	11.3387092606526	0	1.32705606821683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84302971-4	20.9824334224726	0	1.28181810450296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81741211-4	18.7486306140525	0	1.28313544283651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86168757-4	22.1493683664274	0	1.29086499662587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73680414-4	14.122522905989	0	1.28819954079388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95210379-1	3.73831380117041	0	1.36246487551044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4145144-4	15.1318665608962	0	1.28575362516976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8122093-3	6.53005880500446	1.94948854139883	1.26001853023641	1.54719037428208	0.121817346390877	0.717594547665935	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr9-124126613-4	10.4516461841459	0	1.2924231719135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79237823-4	39.7327524697316	0	1.28063764968082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52455772-4	15.3821568715707	0	1.28712977924313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89233647-4	14.1409141386783	0	1.28199056454795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180313073-4	36.742938830359	0	1.29067363682684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140784810-4	29.2682023261726	0	1.27617888957513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134697716-8	62.9296901123146	1.17280263889067	0.239841563634806	4.88990574075991	1.00884274381545e-06	8.0690132114277e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75002354742412	6.98459379729475
Merged-chr2-22589770-2	28.010116717038	0	1.85517188685762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67566890-1	1.89765564721781	1.28350527658009	1.31820442862916	0.973676956854751	0.330216962187134	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	0.845523456341755
Merged-chr11-30102823-1	2.49140193778766	0	1.39665925736715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83717232-4	16.6549602582274	0	1.30009604124881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167358607-4	36.3775317723204	0	1.2799581393675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25269835-4	70.0704750336545	0	1.28081152559817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59864084-3	21.311887141794	0	1.27789876058197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30648793-2	4.39598327856326	-3.94927696610517	1.35892254862931	-2.90618252680306	0.0036586795847027	0.0512937301312985	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82406486039122	0
Merged-chr2-31052639-4	27.5446988813228	0	1.27926746493503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11573863-4	19.1237201098581	0	1.28713081594516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33170999-2	5.54865006258676	0	1.36692889215461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92676004-4	10.079548456589	0	1.30022451175164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8734007-3	7.44230127013765	0	1.3066725034813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33891782-4	34.0380508926008	0	1.27299712881151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120472114-4	21.7978501258091	0	1.28056835803334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80765427-2	6.46062348547314	0	1.36192164314991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25279019-1	1.99602098107357	0	1.46432375584587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107327561-4	39.9009369839413	0	1.28056201839037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121597401-4	47.0762296091965	0	1.28092068024314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41350012-4	21.3179661041504	0	1.27644187322424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121583225-4	21.6553882337506	0	1.29204778525441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98611982-4	41.7883619440433	0	1.29855292839168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89727255-4	13.537850277227	0	1.28760699811573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54958122-4	19.4576055852276	0	1.28426607109151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55698780-4	62.484096659651	0	1.28055527107735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24105516-4	42.7881499458609	0	1.27563101618427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91086525-4	35.6724791732678	2.19318975072622	0.693406215643029	3.16292196586724	0.00156194193023334	0.026803218847959	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09040936152634	2.34574658350842
Merged-chr14-31402210-4	21.0272731707739	0	1.28333003701586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-6542341-4	21.8584023460629	0	1.27877506037069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17410972-4	14.6300488480872	0	1.28554377370514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85505135-2	4.06801449426649	0	1.36498809451405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75763445-8	173.578147696712	0.298126751544841	0.183719076190596	1.62273160591966	0.104646791896289	0.642945426846567	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.06089802615956	7.37250731035616
Merged-chr18-82967716-1	2.49473725248765	0	1.49352731152038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40953388-4	19.0791103309913	0	1.28283672383082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73381783-4	32.5537484838131	0	1.28473960924436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89644335-4	23.8868920086687	0	1.28387992910336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184657516-2	6.9524565581951	0	1.37221601550649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136123249-4	27.2163246555821	0	1.27800731936896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151287737-4	20.0366324875064	0	1.28128186614423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47523614-4	14.0854228048205	0	1.28244946091581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36933803-4	37.0641411176632	0	1.28068948193567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54277376-4	22.7737098138828	0	1.28447608119428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31766973-4	12.5829284179205	0	1.28141793957302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85541373-4	33.019522140639	0	1.28244268860152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117079906-2	4.96456089621106	0	1.44099793775733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95664677-1	6.59047953820299	0	1.344334316398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-20122312-4	42.0550184323615	0	1.29788160933666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24577975-4	16.5442085160572	0	1.28790091781875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53249117-2	5.2634041140917	0	1.39449218245224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59888008-4	22.8046876128246	2.51904393163013	0.882720532253429	2.85372758374552	0.00432095660387726	0.0581519603972264	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.57928534738074
Merged-chr12-75856665-1	2.55918126336148	0	1.33961539789988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133345628-2	13.3447469787182	0.930767009767596	0.596948748629538	1.55920757335438	0.118947258940915	0.705997075342241	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31491744533621	3.62387134283864
Merged-chr8-119426649-4	15.8733181448095	0	1.28262064044369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144044622-4	32.3803740483867	0	1.28280545681865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10392895-4	30.1390107099482	0	1.27864271249935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31392989-4	46.8288978774422	0	1.27590560160722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53928116-4	34.0020045421286	0	1.28353050524227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52873499-2	3.06006780943329	0	1.44144685761424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35860330-1	7.17639421508241	1.70099356457807	0.766784558047991	2.218346140027	0.026531240452199	0.232837824145769	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57342840938092	3.19702738253442
Merged-chr4-63409514-4	35.9715838842706	0	1.30620805740895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166745988-4	12.8532682513959	0	1.28540310966455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82855195-2	3.56192476502914	0	1.42407604796614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21463505-4	31.9322046572912	0	1.275721285498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90067607-4	21.6454435435122	0	1.2796601501802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17180930-4	15.5964283600487	2.66687357933204	0.714695848466597	3.73148044032144	0.000190357792347265	0.00525967031658536	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	3.33614760192983
Merged-chr13-51323285-4	15.9913816163893	0	1.28406441996449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31084961-2	2.62975053844865	0	1.56060670014151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51704118-4	18.2580763834191	0	1.28177853124623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165731713-4	14.1901988813805	0	1.28973770819032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34274603-1	1.7695745973872	0	1.63251017965098	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9818412-1	1.32825449770439	0	1.80051361953477	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152029382-4	15.6041863080383	0	1.27947347642312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24632272-1	1.49028447001462	0	1.53260581237828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10897550-4	21.501646669214	0	1.28743774723541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91080523-4	78.3437515136409	0	1.28200779436045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176827656-4	18.5928892934169	0	1.28016626698861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13304855-4	37.1480491180915	3.11548881869181	1.07154107566372	2.90748426677163	0.00364348671740614	0.0511136288182958	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.898163539755574
Merged-chr10-122900722-1	2.78871134883206	0	1.46553573232511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34973437-1	2.80494354173805	0	1.39705033302948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25401709-4	19.4255600132141	0	1.31990191438244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16084475-4	40.6864493584174	0	1.27540164517648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92899808-2	2.95941196722265	0	1.50631431948752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47224935-8	83.6355862734802	0.462866264726393	0.183572745248542	2.52143238420121	0.0116878135553813	0.12477566812448	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19187052939645	6.64847534882303
Merged-chr14-20298314-4	16.4791388450407	0	1.2813578152229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55155222-4	23.877371467707	0	1.27646060068749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16135646-4	11.9804764507205	0	1.29416359217403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101115777-3	10.8693030448155	0	1.29707768514378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120686299-4	53.1050334614297	0	1.27781751895933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62649799-2	4.11473157959767	0	1.37612370867043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111465024-4	13.5612567703664	0	1.28864728376999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129496839-4	29.5254126145666	0	1.28580488638958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99383037-2	4.9778412406173	0	1.35499068839012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55023227-4	32.2255747172596	0	1.28048970236863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64242711-4	60.333964197437	0	1.27802405563182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61374310-4	13.4599781521664	0	1.28770879903249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88589226-4	21.935048043426	0	1.28836414831255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136684733-2	5.19161901969194	0	1.36765845002098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88210306-2	2.75645577208668	0	1.51593946815986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25812416-2	3.58224800366212	0	1.34252264071593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83645424-4	39.1751904630563	0	1.27969306303213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61054698-4	24.9514567959614	0	1.28130722224546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73017837-4	15.7339961158672	0	1.30008272112602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71251497-2	27.2616102582795	0	1.28322708496383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123193087-1	2.31038369882658	0	1.4548229063568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116013870-4	16.6474536323256	0	1.27930481347768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33245121-4	13.7509239002562	0	1.2897797669708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93071617-4	83.4144048803451	0	1.27932229221703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70832780-4	70.9837824354127	0	1.28135650352671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36326019-2	6.97738603394719	0	1.64507700743605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103051556-4	19.378454954232	0	1.28043276289627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51982437-4	11.8946680048529	0	1.28569410125396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41373043-4	13.2148658263525	0	1.28167654413408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83572432-4	20.8511680942209	0	1.28169140881387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13889614-4	22.4990928512675	0	1.28027846192716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-34300-1	4.99937144742056	0	2.43325204520494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50697899-4	34.9536639362698	0	1.27775683344831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67305039-8	135.674270243554	-0.199828968893195	0.180493058903807	-1.10712827466508	0.268238472495749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.25228482194893	6.9999407502031
Merged-chr11-103960555-2	3.03886084775456	0	1.46119132079741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23023960-4	11.8048815440041	0	1.2812258482226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72037801-4	46.29398526478	0	1.27598303833155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82876448-4	17.8313340109734	0	1.29686315321995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76943722-4	14.5986732987531	0	1.27789013014597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120720062-4	19.4336126739683	0	1.27890009082174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59727629-4	16.1337891948044	0	1.28222718651694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55466463-4	21.5471135996799	0	1.28396460559644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60367479-2	3.75782118464123	0	1.36818049840217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44199235-4	31.824762113774	0	1.27868693707492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8760045-4	30.744713803426	0	1.27663278045034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29787068-4	19.7483890502791	0	1.27760944695195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117979626-2	3.67996776565286	0	1.39091882265782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66748577-2	6.32800617464957	0	1.3391458132856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-26206199-4	22.35195428139	0	1.27627072547395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96856723-6	37.4424112041169	-1.23781680448939	0.324759560674896	-3.81148687945331	0.000138133388803359	0.00409549202574606	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36889061470873	4.15089887827296
Merged-chr15-98512984-4	62.5358243221416	0	1.27675398254499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64402098-8	85.7726054582033	0.305391041914776	0.220792981204921	1.38315557065348	0.166617169462172	0.89251295644521	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45842037237444	6.80695367721618
Merged-chr10-41573371-4	32.5222332345276	0	1.27996794540375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44582859-4	14.4782213390588	0	1.2865518379298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76337145-4	60.7660923300996	0	1.27784887907887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36129382-4	27.4191343222426	0	1.27815992435212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40666002-4	15.0344378078188	0	1.27940175674991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126833193-4	21.728792106953	0	1.27842854436625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43512236-9	247.269771610721	1.06671469394943	0.157988315730145	6.75185812963192	1.45963570049347e-11	6.96214266309827e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.32475628411765	8.38449656668101
Merged-chr14-63135492-2	2.94456781916393	0	1.38579886618029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98674885-7	24.6503037575113	0	1.27484669662833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113591547-4	47.435550223173	0	1.28233319020471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153558666-4	25.7130507982749	0	1.29192052759053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52921499-4	14.4036344915479	0	1.28222700230269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14148133-4	14.0618738117241	0	1.28497230957226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67689803-1	5.1334334902692	0	1.32187669717901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111430020-4	31.8379073364551	0	1.30684389187834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83604824-4	25.0264614825561	0	1.27848834766992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6267758-4	40.6275431040625	0	1.27502706729054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74248945-4	56.0851667425503	0	1.27641858831999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8357381-4	73.2488777729119	0	1.28648722339424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26601876-5	50.8449031573464	3.73049101180461	0.995198862961378	3.74848801645927	0.000177903836202291	0.00498940089290769	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.578845274708
Merged-chr3-88403670-4	26.7954898500178	0	1.27710449621323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44394135-4	17.4398334257991	0	1.28991882024393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57962684-10	97.8016064923325	-0.359656748703506	0.158114240480483	-2.27466386082979	0.0229261019992197	0.20862172472162	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.17203885342643	6.82297145471956
Merged-chr9-7336928-4	17.9767193335356	0	1.28234213481331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55757352-4	26.0769232094068	0	1.27891168028073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80172728-2	4.96826240123029	0	1.35737000551954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3856248-4	27.0202683316136	0	1.28160082141495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6260478-4	29.69780211931	0	1.27519936666427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46887498-4	17.8439814051282	0	1.27771598209191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125224621-8	62.2824208608863	-0.648070180959565	0.213236718845722	-3.03920536982398	0.00237203093609767	0.0369846656049244	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.62494098852694	5.99207545835279
Merged-chr10-80199645-4	9.61176400056428	0	1.2823206100836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27413979-1	2.52554821675013	0	1.41055043119823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173622400-3	14.8175958869483	-4.47132311214936	0.81769296402796	-5.4682176670857	4.54583433271685e-08	6.4158118856526e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08974340766302	0.869764003783424
Merged-chr12-40017157-4	17.9189316712587	0	1.28382193762362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80839149-4	11.8624053474404	0	1.29098968997473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5930397-4	45.7422620619502	0	1.28895160105215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57660085-4	14.5423904408192	0	1.28641235882304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50109009-4	44.4090741021184	0	1.27758202217583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84426810-4	16.1392056206509	0	1.27902529524258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124052387-8	99.9101634787269	-0.680179178983089	0.226885659857889	-2.99789409083467	0.00271852127794076	0.0411434635768117	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.66913080938285	5.94200571154364
Merged-chr4-62283094-4	27.2261110986485	0	1.28278921859744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38809572-1	2.10076588336346	0	1.39080315847586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111160181-4	45.9962183745885	0	1.28201045462889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105263767-4	80.0725938411336	0	1.27657021122229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78631972-1	4.87696362763088	1.05944359416388	0.896046475446004	1.18235339705627	0.23706550646163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12038470799318	1.78481374055866
Merged-chr2-13399038-2	4.10838745264441	0	1.34235486355518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126476082-8	59.2331490241999	0	1.2749765139379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101447922-2	4.67754677639405	0	1.35329286910376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43900913-2	7.73696838036601	0	1.41560073239817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44234064-4	37.7109357917024	0	1.28322013383376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71264973-8	84.9362762438913	0.254736763460649	0.17008021833896	1.49774480506	0.134199566080273	0.766422377650892	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56087511830793	6.77688625407733
Merged-chr13-98031896-1	6.16124307634949	0.061591927747843	0.741666804483375	0.083045280408291	0.933815535374819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25800925211244	2.70417518302649
Merged-chr5-72817880-4	21.548927094553	0	1.28433236186947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50276062-4	20.6108093421901	0	1.27681032980934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122821391-4	12.4943585050074	0	1.28377174545527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126583100-1	2.75642859113821	0	1.41113664634855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155568288-4	16.3590988874891	0	1.28136956892244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88053918-4	13.557518472543	0	1.28682713675958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92676430-2	7.39222557841362	0	1.30363849825466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21032351-4	58.2266743791969	0	1.28111131014878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126921016-4	15.422292129569	0	1.29317461905323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27481756-4	20.2730484397522	0	1.27793519305528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5592630-4	20.0242398181837	0	1.28686985737406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19326003-4	29.4037578624138	0	1.27558115756858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68417975-4	21.6334742106921	0	1.28345623039547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12758157-4	48.2918944518915	0	1.27447779463792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86513488-2	2.80970434110063	0	1.42750834356395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38394348-4	68.2265565524258	0	1.27866544056883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117888275-4	37.0172770359432	0	1.28371771585384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116667613-2	4.23793783517138	0	1.37317487599452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39710841-2	2.45786160223348	0	1.59870259318072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66940555-4	17.462437471101	0	1.27908768134344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47757272-4	32.7030419504895	0	1.28321173610334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152904319-1	5.34752632495243	0	1.3962733916243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96544248-4	21.3565383344455	0	1.28082564991996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149393585-4	22.0963000998482	0	1.27922634968183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61385990-4	42.917014219549	0	1.27770912475181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19347513-4	19.2331396365178	0	1.28010392144952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124385853-1	1.91900508904897	0	1.41240223024231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16213002-4	47.8980223717651	0	1.27830631264096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145293407-4	26.8090196876377	0	1.28338952005206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108911092-8	70.2590109699684	-0.0511431957741981	0.209099048650553	-0.244588371416595	0.806775168894073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11944852225654	6.05065658155103
Merged-chr8-84567210-1	2.41419532895031	3.01403619118553	1.28216603250321	2.350737825507	0.018736230024498	0.178215092748304	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.14490468848716
Merged-chr7-4653972-4	21.6799217106304	0	1.27788482864678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14250351-4	27.8335759501853	0	1.27571927438118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114894024-4	44.7669007622777	0	1.27981091170646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30672092-4	11.6530644336997	0	1.28542983200362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148568055-4	23.8452849895307	0	1.28193275521822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103691726-4	21.8721572947937	0	1.27697565114591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29431166-4	21.1255631121845	0	1.28654538181959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15066619-4	37.2746726010225	0	1.28834962359763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65450880-4	26.6289486017029	0	1.28291377931621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39544374-8	126.341483179569	0.044932278104049	0.161864906511133	0.277591227601633	0.781326166948535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.24334671349651	7.28355353752034
Merged-chr4-32250486-5	74.1425706731279	0	1.27524938648965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121491082-4	33.2523132389333	0	1.27715848832795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84766462-4	17.0233904317854	0	1.28268593661239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-116565104-4	22.1512296024845	0	1.27966169513977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43747981-4	19.0424129478827	0	1.28134809822606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29809546-4	13.0723110188503	0	1.29063641504109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166730383-4	39.480458998136	0	1.27560658710546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148311036-4	20.9227924554283	0	1.28018881676606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65247456-4	19.6590302451215	0	1.299232888402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51459802-4	29.1280070630978	0	1.27673884409978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4545648-4	22.5567491933088	0	1.27711808055979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38497778-4	15.3398363850007	0	1.28081497663234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72184173-4	27.2772364637641	0	1.2807146331926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101741666-8	97.6699465794098	0.713238586187965	0.172772789448445	4.12818817398786	3.65632848024597e-05	0.00141796107341337	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.41797638627039	7.1594693812037
Merged-chr12-100204047-1	4.22946918947809	0	1.32389997029824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3654000-1	1.85709819834015	0	1.59550782434944	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29210146-4	15.444935752505	0	1.28349085154632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-51934198-4	16.3955433923774	0	1.2842570585859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78072474-2	4.79789921964555	0	1.41172169966171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-18781434-4	15.1903837931338	0	1.28019575244706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95674238-2	3.66109953989403	0	1.34379047822604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38483533-4	32.8388856598763	0	1.27769026405377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46849055-4	11.3743660589071	0	1.28462271133224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51499327-2	4.05286840822707	0	1.36152945001408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64615627-4	16.5543905276961	0	1.29176095309731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120042927-4	24.9285648987007	1.93404173131649	1.24544585600766	1.55289105663425	0.120449163755878	0.71236049007074	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr16-10976280-4	77.9436629274985	0	1.28092894073027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38459685-2	8.05756708939868	0	2.08577894642735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46554814-8	209.273215065902	0.080624568675967	0.150600166492657	0.535355109849087	0.592404325032615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.80911369120755	7.88579633353801
Merged-chr17-45583008-4	22.3514327585406	0	1.27890694018544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160220745-4	19.4285862076194	0	1.28990234347219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87842337-4	14.284023708658	0	1.28463360768948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74920873-4	14.84505158098	0	1.28267408156958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33315418-4	28.4027260207031	0	1.28458177165623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54885104-4	24.5290761904631	0	1.28006532494823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135914441-2	10.7963895180876	0	1.29806602626008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33089851-2	6.02679329997882	0	1.31481633476783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120835571-4	19.5680505868907	0	1.28554705854004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6869541-4	34.2957917828638	0	1.28104787486665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52378604-4	15.1804505952109	0	1.28406421587067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29241720-4	33.5220276910095	0	1.27799316844879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70871025-4	15.9974827301714	0	1.27721346767781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108761380-4	35.3244119454147	0	1.27426015228567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81051742-4	55.6508309272012	0	1.27934886236476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70785543-4	16.2138769819706	0.700408171299814	0.852095036704667	0.821983629911194	0.411086213798094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01276722837733	1.20275690226768
Merged-chr17-46879986-4	26.308166489727	0	1.29111615079886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69201553-4	20.6627695068627	0	1.27623068383054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25532322-2	12.179237328276	0	1.30002513251899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43667100-4	22.2336996060299	0	1.2790187620364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11454088-4	31.9261134885019	0	1.28125926631021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29523613-4	22.2107080168342	0	1.27861191176618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_GL456359-19543-1	14.4001937488743	0	1.29169910033621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141210690-1	2.13607410097409	0	1.42768637842452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72139701-4	49.1880069690633	0	1.28533110453281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79076699-4	9.72885219495185	0	1.29541554117213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27536783-4	34.9957816074652	0	1.27706490798001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69008052-9	82.1501638201694	0.678587227072356	0.181630319604968	3.73609003468272	0.000186903771049151	0.00518331651706138	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80340268782442	6.56317737858895
Merged-chr4-63316236-1	2.0311354114975	0	1.44874709708524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5931805-4	52.9857359090528	0	1.28316765581684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54091824-4	44.532559156457	0	1.27665523452716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166662969-4	17.0555639222574	0	1.28272656344813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166339343-4	30.6888403320245	0	1.28070248115317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47156383-4	15.5693950400373	0	1.28548493450299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22822505-4	13.1373870123748	0	1.29247281820281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-68213989-1	2.90463377760429	0	1.39347604715382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34182128-1	2.08291320710461	0	1.43236223155422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-143344702-2	2.90452627743591	0	1.49027925490483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-24645-1	8.05642646096022	0	1.31565143640625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32516921-4	33.0515460057942	0	1.27511914030234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74932164-1	4.61662903249185	-2.45276453930673	1.24415024827041	-1.97143756770254	0.0486738475400318	0.363792890466764	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57482974109074	0.306240821987646
Merged-chr11-54934385-2	10.6119820949253	0	1.35838568635177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70588087-2	4.40072767017848	0	1.4441123653133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112316712-1	2.18223462459095	0	1.46979474128421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95828225-4	15.6190749369451	0	1.283123342735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142021433-4	24.9533497418818	0	1.28224675516233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115427570-4	21.4531479926739	0	1.27909128357852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13537904-2	7.06014411249413	0	1.29684248684854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75087839-1	2.18661822557306	0	1.37725126520105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116669141-5	44.7123062655349	0	1.28475527509784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99234636-4	20.3043693867885	0	1.28467743743304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107724939-4	35.4166326092699	0	1.27600786650959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50471420-4	15.004915333072	0	1.28559036202496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86046341-4	40.1724003111636	0	1.28315665828228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50982858-4	23.6212372883652	0	1.27802233600236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157010275-2	2.83481083665166	0	1.43150159750406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139199828-8	55.0901051963826	-0.298474665337595	0.198790936522181	-1.50145006889834	0.133239192003527	0.763253706616659	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19170366489409	5.88478376002415
Merged-chr4-133159866-4	23.5685124677147	0	1.27910797476172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37586301-4	28.6604417874901	0	1.27977387401067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71193411-4	28.6016518680603	0	1.28391703532812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62460998-4	12.4823099988047	0	1.29093181679436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35127332-2	3.85112141047753	0	1.43682576196293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-59033659-2	8.3858866861961	0	1.30655298258808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-26360526-4	27.0607821595187	0	1.27787040304379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30584040-8	36.2869506949149	0.273971136607305	0.287483362381488	0.952998233837779	0.340590965564341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07643938245021	5.35725181084722
Merged-chr13-9150185-4	30.3368966454982	0	1.2903005733845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191724861-4	12.6072248477647	0	1.29096179918591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60738098-8	102.187688782062	0.151556381262118	0.170444675719345	0.889182255899103	0.373905137470979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61439326985461	6.76094199054131
Merged-chr9-71144666-1	2.05373671592689	0	1.72007192847373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43138576-4	38.7820161501937	3.62640385552489	0.899421541468138	4.03192906588101	5.53208861161448e-05	0.00197336201032002	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.97400306278741
Merged-chr10-14475071-4	24.0480954625598	0	1.28099938261588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29940467-4	60.6452497587702	0	1.27832335836913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6773459-2	9.4240252630945	0	1.30461533823527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20562444-4	21.2954860123511	-0.318883249006406	0.569776796865148	-0.559663452005888	0.57570901587911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70387504349182	2.00129118555875
Merged-chr1-58724270-4	29.7332126694049	0	1.29768336286319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117976240-2	2.59679817282205	0	1.43189298876783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125539531-2	9.32013371982775	0	1.36015545886922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19332956-4	46.1093709195896	0	1.27978655417223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21636879-4	13.1436651852174	0	1.28199280526399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12735895-4	35.0635484057335	0	1.28257961898204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51063480-4	16.6746444678688	2.45547194061945	1.15861607596336	2.11931457845325	0.0340638904242636	0.281704775917838	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr14-103826539-2	8.70068564769825	0	1.30451043345946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95805229-4	40.7923755568964	0	1.27939291661803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39655333-1	5.85432966646206	0	1.30924468985806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8443704-4	26.8049106066572	0	1.29131646117315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25516699-1	2.11470916078494	0	1.35282335395601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8535031-8	68.574210260638	-0.419918958580425	0.197765198176554	-2.12332079886747	0.0337269789677331	0.279863259381014	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.4623683997333	6.04346844544483
Merged-chr17-17867234-4	49.0543364832056	0	1.27720478725702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78267668-4	25.0324555928772	0	1.28577190043472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116319602-1	3.58428735420824	0.375485134896015	1.07492740253549	0.349312087505015	0.726855024809964	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02329261010354	0.989878296978726
Merged-chr6-29246759-4	27.2581656689638	0	1.28249433775395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142921253-1	11.4952223055174	0	1.28867741157711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31386234-4	43.806309137509	0	1.27942056365569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52955264-4	77.4011805159876	0	1.28107985608423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106815513-4	28.4927058537201	0	1.27521302194525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30977416-4	14.9387395848543	0	1.28377109993715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5447008-4	26.5197076567289	0	1.27816339104583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99695569-2	14.1712707647222	0	1.30499341409711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133159267-8	84.483632487441	0.0394859542745119	0.173132441550156	0.22806791102217	0.819593446009422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.44394257757664	6.43772328843243
Merged-chr10-79780275-4	80.4638371384627	0	1.27925285185175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29228370-4	29.0558363259659	0	1.28460511882713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38602364-4	26.9352084939147	0	1.28347591079715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55641074-1	3.82873242660609	-3.42445996560642	1.18427764816527	-2.89160229521493	0.00383282793223429	0.0533277554083324	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37071751506789	0
Merged-chr11-3170696-3	12.5334182601072	0	1.31404731959861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103530060-1	2.68468010451865	0	1.43511150329388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6816417-4	51.9874696700647	0	1.28141993747151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-81585347-4	19.2148638370295	0	1.29056083571188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54948812-4	31.0291901502549	0	1.27967901111585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115075571-3	8.69893379337945	0	1.29749006962295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65741668-1	1.99997892480621	0	1.70027145550761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132006710-4	62.0585931604193	0	1.27752095860206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152582115-4	11.441746945941	0	1.29241305282606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85838218-4	25.7414545415046	0	1.27692090144787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50960551-1	2.36957840352227	0	1.64196582763921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-7755688-4	24.7164030348283	0	1.28281342900489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4969630-4	11.9986103990058	0	1.29010459973686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20415401-2	3.20100764713409	0	1.43422187392468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125361180-4	13.2773356231949	0	1.28138778618649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91706266-4	35.5649816039617	0	1.28318257886752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138322855-4	32.5241556207396	0	1.28189899346365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97373990-4	17.997655985747	0	1.27859409376307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66375874-2	10.1857454405018	-4.69419541474474	0.99040953760584	-4.73965085806042	2.14086792433776e-06	0.000147260163561869	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37559371180513	0.733321818366247
Merged-chr8-14675712-4	50.566288835809	0	1.27898951094178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43914639-5	35.3838965527937	0	1.27563606862634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137076320-4	35.8975915805461	0	1.27774441999212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99499557-4	15.3763252327921	0	1.27989861743018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82007090-5	53.6463122316879	0	1.27442637829771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91398240-4	67.1365305375236	0	1.28027149226627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48962752-4	50.5052863134337	0	1.28612011319449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111511805-2	5.7004044461188	0	1.32584350192088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180300464-4	30.4207682057401	0	1.28032960858154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100059473-4	36.1129683144052	0	1.27714096060976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162388736-8	79.6783828512767	0.0566454241460447	0.233110381652313	0.242998290099889	0.808006722062937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.81472936654182	6.78605095471339
Merged-chr2-21091181-4	16.5244240082847	0	1.28004917327241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63371104-2	4.21232467005382	0	1.41592460439988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103197535-1	3.96021825733631	0	1.35354517078349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77833606-1	3.5489812285108	0	1.4009616441952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49825029-3	6.10633654321522	0	1.34508273801858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86400221-4	28.8722736663124	0	1.27961982302267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94584577-4	14.694852426912	0	1.28355006768235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67380848-1	1.5852968664515	0	1.60380683965231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70263588-2	3.66807398507743	0	1.45451864385114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52236325-4	37.9517849351723	0	1.27514013479016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126137968-3	19.1843096991271	0	1.34032408497973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119792049-4	23.0258679874942	0	1.29266737262593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124711248-4	25.727609890845	0	1.29095715492359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3791942-4	35.6854872471747	0	1.28236389996321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90696293-4	46.8916254212576	0	1.28180805710526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35438445-2	2.22816956159526	0	1.55127440807882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100184309-4	81.1886231450802	0	1.27780315261327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12159504-4	19.7160596596186	0	1.28931232043663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11192964-4	10.9618506841347	0	1.29457345177701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11730333-4	49.8807182657549	0	1.27899992187154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125482991-2	14.911909902988	-1.08605529223046	0.972588541474091	-1.11666470035149	0.264137716308566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73370372606011	0.581381506691384
Merged-chr5-3494678-6	40.816172501738	0	1.27785446837338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167805104-4	27.0419245466477	0	1.27570072018628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34481394-4	10.9059275543988	0	1.28675966732306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38436077-2	3.95743356900142	0	1.33863987471294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184536575-4	23.8017164854439	0	1.28157193334439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15829266-3	10.9594141803902	0	1.30421287348865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40847405-4	15.8467803713247	0	1.29524680639178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55147045-4	44.0068597690211	0	1.27552665626277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13416956-2	5.58718171773856	0	1.38977321207656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35496758-3	6.11655339178699	0	1.31140594495633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9390352-4	20.8125419567302	0	1.28057094784206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112735234-4	13.4889240555743	2.81457294534631	1.12250459215483	2.50740439283484	0.0121621478639724	0.128711857586783	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03295826569721
Merged-chr5-147542468-8	76.3908953476506	0.418526523687128	0.186155877645208	2.24825844330734	0.0245597149441155	0.219695979840954	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.99443800079705	6.4325733889179
Merged-chr11-106741450-4	26.7448769714288	0	1.28216103898274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155505186-1	2.9413645949953	0	1.40044055867932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84027820-2	4.55423791704915	0	1.36533166540715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145258253-4	55.2969737959042	0	1.28171425975007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70477734-4	24.8395555572315	0	1.28066012120725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64374122-4	30.4839327555752	0	1.27890128010885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61642353-4	14.5345909422419	0	1.28365861587197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120394980-4	13.8153956471795	0	1.28822202213633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60935774-1	7.24076562442251	0	1.30659466013942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132618057-8	60.7722589397781	-0.00671688546363346	0.223986183247562	-0.0299879455341653	0.976076666918532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74249738843182	5.72755695222779
Merged-chr5-19891895-4	32.8293823807026	0	1.27685745321584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51558535-4	24.0588487827584	0	1.27719002640164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117252510-1	7.92925319976628	0	1.29812133627717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35634030-3	13.9167840790858	0	1.28263119975389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120564761-1	5.01580242342286	0	1.321629962037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9107514-4	18.0904100634716	0	1.27987597998857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66438063-4	23.2539982980223	0	1.27985970737415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119310185-4	16.2307550432066	0	1.28288688007441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40244264-4	23.4924930106426	0	1.27994591483593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67526757-6	41.461411470767	-2.89788123268731	0.365101916499538	-7.93718439078908	2.06822468469041e-15	3.46217379079734e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01871214612346	2.60391341779232
Merged-chr7-55857904-4	17.8239174586256	0	1.28154729109569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62770812-4	13.530426428344	0	1.28320660211408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-148920488-2	4.68664179201014	0	1.40241773288634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25281647-4	66.636530600542	0	1.27515944558443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103029482-2	9.10825732850284	0	1.54408269313582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77206751-1	2.56031806811678	0	1.48693522967749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57799669-4	20.6716379261349	0	1.28167580906387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-21725472-3	15.2748609403787	0.246964025907961	0.29525927293614	0.836431057531514	0.402912446630897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23712689602283	5.49946034489251
Merged-chr1-186204357-1	1.54014863026171	0	1.46391502894098	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9131208-4	46.8136626756279	0	1.27898681023625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43093839-1	1.50387932893041	0	1.56474261044746	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88826245-4	25.3557572201335	0	1.27760926688482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95612169-4	20.7183232912335	0	1.2783272087353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132269417-4	27.5520795282232	0	1.27657579090872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38650964-4	15.8051402912459	0	1.28234442557941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133659995-4	25.5138159491716	0	1.28851118657762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15228725-1	1.59424906334169	0	1.55545948476732	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6623866-4	52.7503850323886	0	1.28265856773213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105420910-4	25.5241000519793	0	1.28482518196319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29180211-2	2.65973761778347	0	1.47547444727033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16407940-4	25.6897368304676	0	1.28034423165091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83853969-4	18.9883039955477	0	1.27963409702206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7914061-4	20.1505258403591	0	1.2779423665557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95210239-2	3.83940087606928	0	1.52312772878539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79884149-4	22.845908554778	0	1.28327266024299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14372443-2	3.39236845115306	0	1.31669860591011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157363171-2	8.12446648903353	0	1.38582861639729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51832700-2	2.66699518998392	0	1.38339137742822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122328093-2	3.74661822402689	0	1.35650227352894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17222354-2	7.83591889382839	0	1.35675178837585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112785224-4	15.3657511857364	0	1.28133436086986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49158677-4	14.8849094315146	0	1.2791648064864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90235008-4	13.2820072344124	0	1.29898902251675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75254712-4	14.5218393285271	-0.292432657916686	0.596258865923733	-0.490445802367475	0.623818472513026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92276806392382	2.21043983090998
Merged-chr1-171006532-4	11.8651277255458	0	1.28207531522357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15179655-4	20.3219626090381	0	1.27725609502089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94059772-8	70.7342602216962	-0.950554053382794	0.191029810764825	-4.97594616032476	6.4929694138422e-07	5.70281692630285e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88814748273954	5.89299201542343
Merged-chr2-52941855-4	30.0955577316165	0	1.29391977569771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46341402-4	33.7844025611077	0	1.27516288201033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22121368-4	16.9549584190896	0	1.28706923330599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56598363-4	18.7890366288771	0	1.28135624966569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58211573-4	19.7549910497656	0	1.27998630022595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62393658-1	4.18117152319846	0	1.34612571270614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5957294-2	3.66780364565772	0	1.45627962294841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63316518-1	1.77466053945314	0	1.8492460517622	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65542390-4	59.5462635344546	0	1.27821430314159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108428458-4	20.192017663387	0	1.27676912908715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46240098-2	3.95180760358262	0	1.36802896457374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58516527-4	30.1908746981441	0	1.27576560373371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128554714-2	2.85843638253087	0	1.48224117334486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183980030-3	53.3958488749667	0	1.28150591793616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23751385-4	18.9480295199454	1.09437080731841	0.659399245462191	1.6596482553621	0.0969852346261507	0.606236573740238	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23398739120308	2.05684565946125
Merged-chr9-109000917-4	8.82175457562191	0	1.28856482956629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9122860-4	33.7133694667522	0	1.27484837311096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35027179-4	33.0700494009203	0	1.27860612110433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6572506-1	3.3372525156132	0	1.35197865451174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54755171-2	7.48959447561304	3.41864940228167	1.10676137568595	3.0888766787356	0.00200914818497772	0.0325440226811994	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr14-31482574-4	16.5490396691724	0	1.27979551887127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82761619-3	11.3604749637727	0	1.28248510167821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116177212-4	24.9848439559818	0	1.28871422523418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34846163-8	83.6820435664847	0.493399617954846	0.197203884052648	2.50197718125633	0.0123501884663432	0.130230017027862	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88034804900638	6.45954468288677
Merged-chr8-125117166-2	14.6038026187992	-2.69755203225328	0.521763239480879	-5.17006915806712	2.34007378693922e-07	2.5067944537923e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49831774912982	2.58147280816694
Merged-chr12-119139665-2	4.01746955986863	0	1.57538273768509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115847556-4	42.9177737129523	0	1.27948264766233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99448937-1	2.58876223403532	0	1.45906766993624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53823910-4	46.9031683468703	0	1.27710804624508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41595792-4	30.0357459969182	0	1.27577953550001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84126331-4	20.4571079559242	0	1.28006851715552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20930787-4	16.7246764900332	0	1.28154221900973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35998284-4	14.2711840311384	0	1.28012568534213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99229619-4	20.5709663029524	0	1.28738148235929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-12455326-1	1.4714878122277	0	1.5212711730805	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55296482-4	35.1505625063792	0	1.28533316384857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84562015-4	40.3300694975564	0	1.27756228327233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22698199-4	20.8846724494807	0	1.27736264715499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89861317-4	39.6395589045068	0	1.28042487594701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77293000-4	20.0008417588098	0	1.28083625992828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99043548-4	21.200950470887	0	1.27907298897264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65415780-1	7.31970552585579	-0.130069295308118	0.719484858849249	-0.18078114321426	0.856539364762699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92961092978355	2.85512649579074
Merged-chr6-71452969-4	19.2065358623573	0	1.28826473141417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61394185-2	7.8329394375299	0	1.35318007904691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82793292-4	21.7306462758417	0	1.28501158100001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88515842-4	17.2025935451279	0	1.29136514266158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51531058-4	44.2988696184576	0	1.28180162171531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113661692-4	28.1972099686949	0	1.28016032378522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114934310-4	19.5173376839242	0	1.28156355439818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191075427-7	63.9139669708994	0	1.29241310283789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16987962-4	37.1430787608673	0	1.28938336023574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35148224-1	2.91004752523766	0	1.58092435236196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31362079-3	11.714623444261	0	1.30298986473923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60172790-4	23.1502222411392	0	1.27722283817656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163662875-4	11.0850735010807	0	1.28285915830425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142399545-4	51.1577183965283	0	1.27508867409946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45679505-1	3.10379945252061	-2.90388401874226	1.19693534805104	-2.42609930726052	0.015262093381271	0.151683156515975	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45314524783863	0.306240821987646
Merged-chr9-56108354-4	47.2691808214605	0	1.27536059333505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31390008-4	73.2183108806757	0	1.28173288423336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124019452-4	19.7238920515342	0	1.28278463665973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76226221-2	5.58519753839097	0	1.31080915311435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18014440-4	55.0684353298866	0	1.27913807546245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162565105-8	101.697992038172	0.427717125279367	0.263875904856263	1.62090254323277	0.105038541349146	0.644492819061157	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12123417516943	5.5943850344789
Merged-chr8-126832176-3	25.9367028284386	0	1.28391666778588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173803583-1	1.45260749859245	0	1.93988821442848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10428969-2	9.23356157408221	0	1.29575188674995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93109815-1	1.92400716529359	0	1.6668578197382	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118796790-4	53.1662313682185	0	1.27581538545614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180263613-4	35.5400397385053	0	1.2821257208059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19803927-4	18.6290445919232	0	1.29255843911443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39530417-2	8.59273605433484	0	1.29292877310354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88244354-2	5.16572438890277	1.96584223610932	1.17482381706651	1.67330812293026	0.0942666541897798	0.593358516200617	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.14490468848716
Merged-chr8-117224810-4	11.4010381530931	0	1.2835385671338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11744350-1	3.57447706107218	0	1.37122395680752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118109894-2	3.72205559637787	0	1.44731519107352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54989029-4	15.8945837389595	0	1.28519868080668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116446865-4	42.9147066654376	0	1.28086992766359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119912423-4	19.2877149356946	0	1.28135393792448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134310439-1	6.68680698167811	1.30926678457905	0.634803216262441	2.06247660855859	0.0391623823185431	0.311629936067647	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0296028288706	2.5786402909771
Merged-chr12-4211273-4	48.7482415354018	0	1.27945374923177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102399747-4	22.3754533232813	0	1.2795208322103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-112079146-1	2.83733020199122	0	1.37630029574168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23256835-4	34.3973297127162	0.24040933257811	0.751834638085808	0.31976357619037	0.749147561013419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38999833332037	1.26501898168246
Merged-chr7-88271666-4	46.1148019271004	0	1.28330825420837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80229154-4	15.9819693817355	0	1.27921202008802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33573908-4	43.8350212929422	0	1.28298759409859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116059260-4	25.2701699962143	0	1.27774559570276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104001181-4	46.1399203260791	0	1.27934183502256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96967045-4	20.8666646518647	0	1.28159551448634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66052165-1	3.08249549680324	0	1.36862773820546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30694883-1	1.90313391196084	0	1.35710127405941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23670811-4	23.2531632237299	0	1.28020985387298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71817662-4	21.492385369851	0	1.27972928469137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61337897-2	3.96865117583994	0	1.36934481797354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43034969-4	51.2345964984648	0	1.27675252163979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50205311-1	2.4196751753215	0	1.41284844749353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63089660-2	5.94339758221784	2.46056818749688	1.2056196872963	2.04091573273401	0.0412592037426458	0.323082555753976	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr5-95919595-4	24.8953039175529	0	1.27797861561833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125317550-4	28.1409837543301	0	1.28477023838271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73733213-4	16.7035606936721	0	1.29310327177221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-131801778-1	2.50259553085545	0	1.35384648190208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66601209-4	9.51283371571396	0	1.32215095059639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30394521-8	114.727100278371	-0.0160098012773256	0.17974712015883	-0.0890684716571748	0.929027493752879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47750875860135	6.44600413972906
Merged-chr9-50477977-1	1.92954033456821	0	1.75686569969799	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-4734306-4	29.8622974575677	0	1.28334140905734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52383929-4	30.0618932244576	0	1.27378743372679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-157483049-3	5.37299236484936	0	1.30848204671379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38938652-4	20.9176186749178	0	1.28564969522332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96645361-1	3.1628413218488	0	1.32798363778961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104972994-8	59.8216357572625	0.530171055054513	0.233292922485794	2.27255524687765	0.0230529951416345	0.209379018754483	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59876884816813	6.17053257660809
Merged-chr3-95653839-4	35.0871945549285	0	1.28235504932646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54119462-4	52.0116381218886	0	1.27828845196842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38352266-4	14.9307323291546	0	1.29034669470574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9127765-2	3.26090452569691	0	1.45018647227629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51138049-1	1.92994854024059	0	1.57299999948416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59726042-4	29.6188673910206	0	1.28092395066576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86897295-4	35.6343742356059	0	1.28128113624613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146185733-2	3.70552129728294	0	1.36466647743724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86532572-4	11.2581414349657	0	1.28871329272413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142537725-6	35.6601140612736	0.327377818993697	0.211944705904473	1.5446378695642	0.122433880832145	0.719734110908363	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4520970194728	5.76658304969343
Merged-chr13-37197729-1	4.24561731990967	-0.434843670507493	1.39876215166705	-0.31087749263822	0.755893755538292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	0
Merged-chr4-132167612-4	15.0768208795066	0	1.28355160828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62329476-4	35.424206886218	0	1.27637626614558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34464642-4	14.6246735213874	0	1.27946038685982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113548137-6	51.4909968805331	0	1.28371720485501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169106389-4	31.8670731984808	0	1.28227270187063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25091367-4	25.9432682776034	0	1.27568517190711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3461648-4	17.262054633552	0	1.2836078937319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10740388-4	19.8191629449138	0	1.27877324352923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71930255-4	22.3747402423394	0	1.27946569818784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86170823-4	13.9830190227433	0	1.28393626629667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139364783-4	46.8080710455919	0	1.27863614349866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65486040-4	20.4973608528328	0	1.28816402747161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98952828-4	12.0932718284444	0	1.29402432784316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35066812-4	23.7408544648556	0	1.29291062814881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57285185-4	26.5062615515413	0	1.28077784084552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81855150-8	81.3092327036865	0.0295324982630404	0.258846816885112	0.114092568795807	0.909164413000103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3944452296739	5.33024875682283
Merged-chr8-19703339-1	3.23150223157195	0	1.42462809292611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102866681-4	18.2653348188256	0	1.28003923732198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159593022-4	15.8648772742119	0	1.28937692289454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115639168-4	36.7519785118158	0	1.27743602872311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142747408-4	32.0398034273861	0	1.27952052701967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73054258-4	39.1876323150905	0	1.27743819861598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3314022-4	16.0537920666048	0	1.28250667737175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70260466-4	20.3151337000812	0	1.27917190450804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53116032-8	60.136598114952	-0.230919999704095	0.224802900908799	-1.02721094243254	0.304321146651816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62980476110665	5.40017256129838
Merged-chr7-31089888-2	5.83789760570282	3.46545499110637	1.12462932020256	3.08141974324679	0.00206016006042481	0.033117643126327	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr5-64381015-9	73.1576774559458	0.75880138473739	0.266028298105279	2.85233334251192	0.00433995630866551	0.0583296554804724	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19439362083486	5.97149500221846
Merged-chr16-87689467-4	27.1428789081674	0	1.28636316297932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119925392-4	33.069194262706	0	1.28429359730718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76527749-4	24.7555620052599	0	1.27529106370472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20127730-4	23.6840557998362	0	1.28491030426865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13461752-4	26.9426949747516	0	1.27723485126104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137687870-4	15.5325278389623	0	1.2862463410964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80169836-4	26.3768974329713	2.4478817916863	1.16223999086214	2.10617584228063	0.0351890807787067	0.288225830103456	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr12-91738561-4	35.7764416950321	0	1.28195993642904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96935223-4	12.9379462868123	0	1.28397116350143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105892037-2	8.15038835141763	0	1.30692139334231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154288827-2	7.5326991941753	0	1.29475909200163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67703262-4	13.8819512143219	0	1.28289882188635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43449595-4	22.6230198609503	0	1.28285083191374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140257884-4	19.0073509134119	0	1.28196401931959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34904283-8	72.382441674831	-0.42864215241247	0.203898674996145	-2.10223118134815	0.0355330296240856	0.290478488968756	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26657724737444	5.83657910625149
Merged-chr6-34944759-5	17.9867057681444	0	1.28188444534158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167886695-4	24.7756127315565	0	1.28607001539021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21126863-4	35.346721420359	0	1.27827683846851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117364608-1	5.16127405012338	0	1.32124331161724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88508724-8	54.0565618303423	0.0234821618828329	0.266039983261822	0.0882655366119277	0.929665629813944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55463660975793	5.55522264854945
Merged-chr2-132094618-4	51.809495660127	0	1.27834771553992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58480938-4	23.9076190857606	0	1.27677531015318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3706890-4	22.2202703911604	0	1.28257531132318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54846622-4	19.3106008706972	0	1.27813328501729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101867089-4	26.5540135460322	0	1.27604830050947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7943228-2	3.39217516218458	0	1.51777852258159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62663572-4	17.3059559802581	0	1.27782595233474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29308319-2	7.57661987155578	0	1.3037351792658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11558881-4	19.0032946865138	0	1.27673118237841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73970597-4	25.8483616726419	0	1.28293522379569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32113676-4	28.1909310426768	0	1.28053025993551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11464339-4	111.778106553732	0	1.28133914451837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65790291-1	2.28309677886444	0	1.4211569057046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121630825-4	40.8209152001619	0	1.27878843002067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50591036-4	36.0657086110203	0	1.27831334430187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63122752-4	15.6825647544146	0	1.2812013679539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139235038-8	65.9162963565795	0.0316803459853625	0.218411955693697	0.14504858895999	0.884672508962201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05686967078372	6.05040037874576
Merged-chr1-161896269-4	18.1105526521747	0	1.2834217799906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25576253-2	4.53474082254531	0	1.40098461054395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137696679-4	14.3447445560746	0	1.28282566076007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19145599-4	13.6635605585754	0	1.2883238409461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75754578-2	9.01132049385251	0	1.34690461539273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137942434-4	17.0738153497022	0	1.30727146876903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28397920-2	6.75310242116019	0	1.31676880653916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58921220-4	30.7073237056258	0	1.27633717128335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126536341-4	20.484980725472	0	1.28632911515136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125581479-8	134.103715273416	0.368689097093507	0.146382868982311	2.51866287125483	0.0117801387516384	0.125638150296158	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.26836507488576	7.63358966585233
Merged-chr16-11270846-4	13.4730911559209	0	1.29981477309293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99150988-1	2.35158873143562	0	1.60800138686213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135276885-2	5.1026697056163	0	1.35218104686327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153199269-8	67.5919595644122	-0.695992561479941	0.184285624877753	-3.77670565428872	0.000158916349986131	0.00456664371424525	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.59859270467018	5.9039963753069
Merged-chr4-71291952-4	51.9267535111394	0	1.28495573506798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77034897-4	13.5671288086538	0	1.28109765048443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70022384-4	21.3652689922195	0	1.27801688843269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45881584-4	48.5433188409036	0	1.27486097961165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94097893-2	4.51139061549936	0	1.33493415635526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24670805-1	5.6055141817216	0.211986931532381	0.924991961816652	0.229177052648161	0.818731307307857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71823900122192	1.63749632292653
Merged-chr10-122615812-4	11.8986136338055	0	1.28899079122641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54936210-2	10.8034843687585	0	1.36277867535741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90244566-4	30.6264191508982	0	1.28311542994903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184622704-4	17.3630574075826	0	1.27777472815449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121571682-4	16.9852113369826	0	1.28254899943354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109687464-4	22.1664708374587	0	1.28830893117232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28622704-4	18.237629348259	0	1.28154263388463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96751709-4	11.7011850694174	0	1.29158064798512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63731602-4	40.7525245321347	0	1.27508435345532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103992845-4	19.5483837027493	0	1.27849884016958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57812553-4	30.6335067507985	0	1.27684489235054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65594400-4	27.1324577227655	0	1.27816945483389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90071688-8	56.160882585331	0.0978824821200392	0.233047844439048	0.420010244487113	0.674477969855114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92818782022156	6.00318884830935
Merged-chr16-16073520-3	29.9246275624651	0	1.27661649665689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5764895-8	62.1565322287067	0.322725855142469	0.218066860379787	1.47993993484571	0.138889277003403	0.785040973537272	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77221532752954	6.10404024294087
Merged-chr6-72159985-4	18.2334093576994	0	1.28316779175442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33931807-3	16.4235676813371	0	1.28942020662513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80342939-4	29.2501716239806	0	1.27827785531971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43972328-4	32.1878198578195	0	1.28670862671134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125256728-4	15.0221487539137	0	1.28153263782985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21166435-2	9.78474351608039	0	1.30238439204453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114445485-1	1.72808854781864	0	1.45214566371967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48185438-4	34.7612631529135	0	1.28077504942381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117418111-4	29.247999456458	0	1.27429125859044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137608758-1	2.16698667741238	0	1.39853304533762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97302106-1	1.50410566057222	0	1.52014738237716	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123869544-6	54.5620665450828	0.176432937514764	0.246173010481782	0.71670300968197	0.473557368431525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60801155044899	5.77809666161171
Merged-chr1-182905895-1	1.67330844796718	0	1.54718945451698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92483735-4	23.5058675626135	0	1.28493790930512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54729520-4	17.2027020947579	0	1.28556511187552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67781016-7	82.274295241535	0.852136813842364	0.267023822010794	3.19123892177649	0.00141664078902113	0.0248336697306486	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20022321125832	6.01674294693306
Merged-chr18-54847131-4	16.9190091882866	0	1.28445696477615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25465706-2	6.02396937677369	0	1.37364538558887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29731101-4	30.2443932167122	0	1.28439609723928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58718512-1	3.89605909492405	-3.28071965070924	1.08839779694963	-3.01426524374071	0.00257602483988715	0.0394129991072971	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28095503741335	0
Merged-chr3-31134850-3	32.6610980707293	0	1.28789009522981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113101841-4	23.900860716358	0	1.28369241782662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126767549-2	4.70534555171148	0	1.41836948444334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32669564-2	6.50221858972055	0	1.41948818968542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140616871-4	56.0513823358657	0	1.2832026098044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-7281539-8	92.949355410805	-0.185952758672824	0.196393623276837	-0.946837048831797	0.343721819719605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.33795422564934	6.14834496095192
Merged-chr19-56455565-1	4.5706411105857	0	1.39044276936355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53668559-3	5.43353158065907	0	1.38113630105075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57976074-3	15.7109518214095	0	1.28171880507084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35400598-8	78.0005184345752	-0.683800925689755	0.280230592987852	-2.44013659750346	0.014681709230827	0.14732662337187	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.01585389545668	6.15975997007386
Merged-chr12-85192843-4	15.1555885877608	0	1.2865368904557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108683925-4	12.087734253398	0	1.28071237995492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63989437-4	24.4183077077579	0	1.27696176163699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125359727-2	7.59166535007943	-1.22041012335448	0.954975614977909	-1.27794899075273	0.201267412492697	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79069558266414	0.890396206374751
Merged-chr6-120466731-4	17.6468518937652	0	1.27962075859853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25519403-4	33.4709749418457	0	1.27926412523502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114453390-4	18.1700786751875	0	1.27732616544425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72396162-4	24.6968546302638	0	1.29263387676204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133056211-8	42.0982831682736	-0.00909399051646698	0.258051705372878	-0.0352409626719048	0.97188759901437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56853360204842	5.54694415900864
Merged-chr6-86585265-4	78.4856915288098	0	1.28278981070511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24628723-2	3.82645787857125	0	1.49949682617416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77551144-4	64.3522175516767	0	1.27759778994258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120137937-4	57.9033458845513	0	1.27924191541506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156678976-1	7.36993872676805	-0.285502236206016	0.579485717474116	-0.492682093098815	0.622237232272022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88222617312264	3.48366914837842
Merged-chr3-131653985-1	2.52313632605424	0	1.69446678052559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43521211-4	24.1302534149887	0	1.27599645432003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102646726-4	14.783968554546	0	1.29414654693298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95795359-4	22.0586062690639	0	1.27782819345862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67899579-4	17.3791698655641	-0.337957127407555	0.951814593562283	-0.355066133355561	0.722540047406692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.635744023561357	0.890396206374751
Merged-chr16-21636354-4	21.6065730547632	0	1.28055733773817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143490154-4	15.1743649745805	0	1.28352352201885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42396583-4	41.8060185935876	0	1.27856113232703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84846843-6	36.7049055685653	0	1.27619550227248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8020075-4	24.8953774557015	0	1.28817855603624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100067593-4	19.2685771206045	0	1.27631252671871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84982831-3	24.7359150421129	0	1.28354747477031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126497751-4	35.28582527191	0	1.27610934318962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9725579-8	52.7984617114646	0	1.27392362113346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48834465-4	15.0226488761464	0	1.2844021898242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23807819-4	40.2064976525766	0	1.2837393056372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180822459-4	12.9443429715722	0	1.28142762653362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65561150-4	18.8048809483822	0	1.28186343670452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80751692-4	71.5177292704287	0	1.28361378533404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38710401-4	63.7869392382491	0	1.27960205732022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55353719-4	13.9428221677214	0	1.28037250874053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79207884-4	17.5412971257638	0	1.281079702712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135735951-4	21.9204107300001	0	1.2791464307646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29675634-4	12.2487422819409	0	1.28713277082939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3163077-3	16.8433530206308	0	1.28994901142428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80117344-4	14.5376116293801	0	1.28651573894984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50063727-2	6.61813277587219	0	1.32778395378466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35140042-4	15.8698367796472	0	1.28009081513286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100509444-4	36.5981033074586	0	1.27942738105006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19817945-1	8.84581684187173	0	1.2919813173883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55253622-4	15.8475310159753	0	1.28503305940462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5569803-4	14.3616830740314	0	1.28913688927282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154177909-1	4.61445711205093	0	1.36892224833266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128135203-4	26.7895104844885	0	1.27859711265869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167231346-4	16.7705798483133	0	1.28068762790484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46550431-2	14.5831595903353	-2.59701390489067	0.696609341826057	-3.72807791822456	0.000192945728591629	0.00531992893694034	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63355228428361	2.39273700449129
Merged-chr8-108723339-4	18.9692152476257	0	1.27810065105991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127662271-4	20.8933286405298	0	1.27831412491355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113433957-4	16.4444610699952	0	1.27874594516466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8677394-1	2.4949449858981	0	1.45172207638184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96530798-4	29.5803225175672	0	1.28123554759951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39718221-1	2.17020525218798	1.0530135085169	1.3001450292629	0.809920035700855	0.417986135736466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0.73596151290311
Merged-chr3-79239355-4	15.6401555181337	0	1.28106243505643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53888900-4	17.5537801564217	0	1.28228812518588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27650298-4	25.6445614299533	0	1.27918877344218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86479257-4	21.4462002147275	0	1.28566559504927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51615809-4	16.2711938300532	0	1.27986300979602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166430035-4	53.9110877822391	0	1.27811026605361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81754860-4	25.4191663655232	0	1.27968397487527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18000396-5	49.367359808009	0	1.27758402449427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45379119-1	7.38123011964183	-3.48279109600267	0.885885719987981	-3.93142254968273	8.44447014461865e-05	0.0027645909121756	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78182429427395	1.31734301959449
Merged-chrUn_JH584304-328-1	2.22435865314198	0	2.02866565962739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132169362-4	57.4967218003548	0	1.27527242441377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3136862-3	15.4058321601301	0	1.29546894630815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25109527-4	13.7357314151839	0	1.29080729119874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167759822-1	6.94056029004168	0	1.30198015771165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63132959-4	22.8704886723338	0	1.28258715797693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86282131-1	5.21911253002398	-3.05258664732145	1.09868530920602	-2.77839943953329	0.00546274191673262	0.0697759246433625	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48136360353715	0.581381506691384
Merged-chr12-102330378-2	3.95887879665202	0	1.34131258071364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86574756-2	10.4438040308858	0	1.34426415573608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74809106-1	2.00011511596564	2.23006053814001	1.44863999065835	1.53941666150369	0.123702609021402	0.724844932667909	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr13-99247117-1	1.96215932031642	0	1.69553518809307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96759891-3	24.3791925208385	0	1.27894927836376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177983306-4	83.6028396557549	0	1.28894387912718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77343931-8	170.284986334034	-0.137146527592866	0.121796548917864	-1.1260296684215	0.260152961584919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.81488278773705	7.65065622396763
Merged-chr6-124745655-4	50.7301067545193	0	1.28385772779015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53412166-4	27.2350390757615	0	1.27871931720503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12408854-4	44.4993171076508	0	1.27284118425082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12087105-4	22.2065610246067	0	1.29483939114562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32501042-4	23.1629182491909	0	1.28413882735587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158130481-1	6.61802977953384	0	1.30813202499547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59659592-4	17.6362992254374	0	1.29816066325217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71300076-4	35.2197573313936	0	1.27883919494908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19968490-4	14.5459355466376	0	1.28207119061144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43474233-4	14.2084843191727	0	1.28697536720903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103946002-4	19.0927226799425	0	1.284011803011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124709158-4	18.6837193369668	0	1.27857578128387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40569302-4	29.6024881729015	0	1.28201914235811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40641538-1	2.65521150570051	0	1.42444124574735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73024676-4	36.9754618250273	0	1.27427479202644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15987350-4	11.2225428869099	0	1.30921906467587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62167043-2	4.24796546256388	0	1.39724296177401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91870401-4	29.9040167542991	0	1.28381227309384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86292499-2	3.92160961472279	0	1.3775015129708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101776992-4	34.8699023511802	-0.0931533358407426	0.426586562085745	-0.218369128613148	0.827141516920997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29322334838124	2.69916234073872
Merged-chr5-65091679-4	27.6056810631985	0	1.27738252627727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117242360-2	7.02336445724521	0	1.31382117494246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20104602-4	61.9764592222317	0	1.28069242701298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97340676-2	4.57729759213214	0	1.36793114932571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151285312-4	16.076526967591	0	1.28315095329259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170209393-4	21.2591479174449	0	1.27795246667369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12540826-1	3.68400720228366	0	1.36319472211923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100216172-4	18.7348669424414	0	1.28856137077058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17383157-4	20.6769985658561	0	1.28084118573654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38486093-4	15.1151736362593	0	1.28201376438618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21517727-4	16.0965026667242	0	1.28061665310865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33099307-4	23.3871556466592	0	1.28117718903441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79181558-2	8.72350659929215	0	1.30566607242832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88332538-4	15.8372627940546	0	1.28287665435354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114443131-2	6.51706105308734	0	2.31530423690263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44920676-4	48.5501188154292	0	1.27572214243287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22847842-4	18.4287997716811	0	1.28920636109714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46888747-4	14.562986130621	0	1.30638107005035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114293549-4	42.2932802408481	0	1.28742756535913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191194257-4	15.2120495451271	0	1.29439941405306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25331882-4	55.930310468998	0	1.27663572256991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124708675-4	27.7138819121207	0	1.28672578809871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91216648-4	18.6524877692996	0	1.28100743087267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45907600-3	5.53260861311979	0	1.33850327889329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33903821-4	34.5018235167313	0	1.28454982042618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125333659-4	36.4396057735073	0	1.27691314613076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92861805-4	35.574756521179	0	1.27561871525819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95300485-4	39.1640005929032	0	1.28437157096488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30443462-1	2.5450881603536	0	1.38276954380733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4303321-4	13.3160855491616	0	1.28191425059771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12317586-4	36.8221830443223	0	1.28177600324732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137828874-4	36.2261112550581	0	1.27465565716035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180678811-4	16.1811345441204	0	1.2799626225065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113654308-4	45.4358812983246	0	1.28359190475746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178369465-4	13.4488963358426	0	1.28854004912088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22811649-4	16.8408855982129	0	1.28807257204013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128755543-1	3.11813642790335	2.51261496400311	1.3347903940966	1.88240414009248	0.0597811642251349	0.422602788440801	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr19-21144835-4	26.3743424114333	0	1.27791235762984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126853243-4	33.7081617120734	0	1.28383587099724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105890802-1	1.85936314229327	0	1.5285200941122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25288035-4	59.3289382986228	0	1.27443284493794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112516475-2	4.05861790248304	0	1.36407348221065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44228351-4	27.9569994091122	0	1.27636258702833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80015548-4	18.4880099465015	0	1.2824959484715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36018318-4	41.4139961244644	0	1.2801051808058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27696340-2	4.07383281223481	0	1.50653205073919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8702022-6	55.0014164911103	-3.09396271668423	0.355588596803284	-8.70096157328646	3.29083694497727e-18	1.2649590059205e-14	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25992667691718	3.23921507520347
Merged-chr6-82766736-4	22.0483440958609	0	1.27719738571957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19630723-4	19.955069254707	0	1.27515610022861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72413451-4	32.4465828155298	0	1.28765008004574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43368684-4	57.2209657928223	0	1.28271848356051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5777079-4	8.64685436906655	0	1.37445375538819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19666652-4	30.589436434269	0	1.27595027469364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148857169-4	16.4256065882322	0	1.27919018768544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59534064-2	3.47402158591586	0	1.35336829282065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10416291-4	19.9798489571528	0	1.28647664479452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170184753-4	27.1913036508869	0	1.28074333511117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60390719-2	5.77501465112776	0	1.36658805447487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92274675-4	23.6631718663062	0	1.2758885259604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85380687-4	30.445921902119	0	1.27629263086095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25139058-1	4.67801702574496	0.0501731799726117	1.03242155979949	0.04859757092089	0.96124000580397	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5077810985762	2.56041795642383
Merged-chr12-85710818-4	74.3510544152469	0	1.27901736074019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4826374-2	5.14509295697991	0	1.45768985518636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116189904-2	11.7479213409008	0	1.28734731590658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57923071-4	17.4593436214186	0	1.2807683789252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17314686-8	53.291795495714	-0.1066142188735	0.262669051311869	-0.405888011324621	0.684824887248529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96937481408432	5.89392138798421
Merged-chr1-144243705-4	20.352564057037	0	1.27664342943496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58406088-4	21.7937297873813	0	1.27929242105647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135298765-2	5.63359703342748	0	1.35558084612763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73765467-4	13.2535454875543	0	1.2845804102934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19320132-4	67.7152200919626	0	1.28108267553212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82764349-8	182.325574286811	0.163694884406684	0.15514648665811	1.05509888063022	0.291380103936666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.65770892100714	7.82053768011981
Merged-chr17-43201054-4	15.0850501631776	0	1.29141609758417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5080231-1	2.28972924392258	0	1.51374289078941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96709225-4	8.0027473461604	0	1.28961477899422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57375489-2	3.24855909081044	0	1.45765188719128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56938950-4	23.5670970289706	0	1.28184625633928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120876113-1	2.92633744302952	0	1.33991691663069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128433726-2	5.93691398605351	0	1.3932145812539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80331716-3	15.3943598652942	0	1.28492856201254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60257953-2	10.4749457559743	0	1.28945639902127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144198715-4	15.5333884509948	0	1.28855358225955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135708022-8	60.134579255279	0.961222644671596	0.207613748681398	4.62986026106911	3.65912583361401e-06	0.000226643826278049	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18536608266198	6.1124208013682
Merged-chr15-79768492-4	11.9360298645118	0	1.2879014527132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21126419-1	3.35317232967695	0	1.34462856695811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116004913-4	15.2424543712963	0	1.2863592105131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65353811-1	3.13631128706759	0	1.33448492483261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25654116-2	3.73168433412894	0	1.49940912316908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22119103-4	50.5824083936541	0	1.27465954029052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166627748-4	21.3618114988758	0	1.28047573421897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98912806-4	13.9758090503915	0	1.29335801393055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56097947-7	25.278376498868	0	1.28283668689964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98564835-1	2.6089727001487	0.095714859286481	1.46316558156883	0.0654162867772313	0.947842556881343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr13-117242235-4	18.7388455087098	0	1.27786249316692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148492355-4	32.355182361071	0	1.28434923660133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4294585-4	42.8769368956499	0	1.27499548582312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51916762-4	28.0108412261379	0	1.27881816709397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69378543-1	1.03483427747101	0	1.77051600693526	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101169984-1	2.55279361327046	0	1.44447530970339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54971479-4	35.0974344441426	0	1.2861518815084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80325380-4	24.9419442496114	0	1.28370307662093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99214695-4	64.9542967798379	0	1.27804416840086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128096808-4	17.8891082382886	0	1.2795085530095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14174318-4	33.1996869455984	0	1.27897166757943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-6413-1	4.58390818953409	0	2.43325215818614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63938807-4	13.5791851628483	0	1.29211774821764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79527096-8	45.5086012797947	0.515398987316074	0.268391466007099	1.92032554158202	0.0548167920827468	0.396201536936088	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63900121825579	5.13517193128404
Merged-chr18-64921030-4	12.7590431952531	0	1.28838417696735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92864355-4	52.4953169824394	0	1.28090102443156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13552242-2	3.42211209484559	0	1.46497516901095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33934902-2	7.67945253361649	0	1.31488761510833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90244955-1	9.25827947263139	0	1.29430282024671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110497601-2	3.76627861694879	0	1.40977766285829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85713671-4	40.5120069507915	0	1.27784057003658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3873064-4	27.5230993222422	0	1.27761452020736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151195513-4	14.7297466334055	0	1.2946694480116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11598452-4	14.4501534217982	0	1.28408293719672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50691013-4	16.1463008624632	0	1.28744602497819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30929892-4	16.8141105767904	0	1.30737126575887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92241626-4	30.1856604311536	0	1.27506603901701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15841715-4	22.3867300598332	0	1.27845205874654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120158277-4	18.2534281325287	0	1.27859391344743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17398846-4	36.4844117647753	0	1.27592457343025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-39430307-2	4.8042909011432	0	1.38764164513982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44582640-2	3.37638621529863	0	1.49606801702369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36023811-4	12.8055572269493	0	1.28504743533684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-51921303-4	42.1046020562178	0	1.2729776463687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31068959-4	15.0580684553512	0	1.28094769745873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64344478-8	126.937478935127	-0.901714550875952	0.165858676063933	-5.43664384809374	5.4293509193777e-08	7.46918663531906e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.364437052933	6.43783395738345
Merged-chr19-5810442-4	44.0853829605045	0	1.27406825482789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6562589-4	32.582955481279	0	1.27760693154359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15080625-2	3.3582480774621	1.81881354377536	1.43983233406126	1.26321204264466	0.206512986102722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr3-100993842-4	13.3375167923399	0	1.28908660618527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53139453-3	11.519469008363	0	1.28375257940101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3104932-1	4.64466479037343	0	1.36720489046349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36469049-4	31.9346033678718	0	1.27992180446475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63031827-2	5.02579135770711	0	1.36136484316236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95688352-4	19.0723396415524	0	1.28051604013367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53344091-4	19.6567409868943	0	1.28509773051901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39076693-4	19.5252027983452	0	1.27708447266827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95864229-1	1.76825452424563	-0.668853765192423	2.36555897028224	-0.282746603908429	0.777371088527286	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0.306240821987646
Merged-chr2-167983256-1	3.12636418821251	0	1.42184479271968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121741710-4	27.0334166049554	0	1.28795278312268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19301983-3	10.2788593513805	0	1.58001731171491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26693938-4	18.5361043583765	0	1.28866566319822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149375268-5	27.8696726109744	0	1.27731180841607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106624562-2	20.9419082977093	0.771104355759104	0.596360544466229	1.29301705640047	0.196005160006653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48439434102127	2.48990049581018
Merged-chr5-125329383-4	23.7253105017295	0	1.28183789601405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142590915-2	10.2542946125894	0	1.2837993510095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111798153-4	20.1072018332636	0	1.28142673133658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35748463-4	14.8706815537116	0	1.28565050476485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38086915-1	5.05737135832845	-1.28257275631497	0.921028737072572	-1.39254369021268	0.163757821071944	0.881459520244421	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80039348687422	1.88903407179563
Merged-chr13-52042025-4	19.9828106180969	0	1.27790031077381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111180184-4	15.4295597325315	0	1.29848977898113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119090352-2	4.0318832964174	0	1.81349347587932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87170592-4	20.2211652084507	0	1.28665804658703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-39660-1	4.29834834985942	0	1.55149728447781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8708133-2	2.49149726262191	0	1.62980190325283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94052157-2	5.32998463815792	0	1.43351978888202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95347059-4	10.4497216373101	0	1.28345352340628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36727706-1	4.2547036261927	0	1.3255145214898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8985043-4	16.4991138658132	0	1.28427759715961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102725284-1	2.15917223407544	0	1.47948566762234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88415273-4	17.0874464183372	0	1.28255109658869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97439145-4	20.0077072989964	0	1.27798349040792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64301959-1	8.85842981031048	0	1.29777966759337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25407365-4	20.9052794225667	0	1.28738407889359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23894444-4	36.2119267698203	0	1.27627637979673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102979785-2	3.79259167448343	0	1.39501606352902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122920160-4	33.9988316106758	0	1.27544996911378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47767277-4	19.0812364924228	-0.0771347692320303	0.716819507866749	-0.107606961564959	0.914307474530545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66198301466254	1.354969417986
Merged-chr12-85424058-4	14.2726308631135	0	1.30426738577394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83592289-2	4.50393942853348	0	1.32600560857239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57640653-4	19.6981236838875	0	1.29082140485921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130997900-1	3.49678780231821	0	1.86163326650129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40921494-4	41.4461840182555	0	1.27556835555569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172347588-4	15.0634725159613	0	1.27812111452826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74937076-4	16.5356818018127	0	1.28069447999519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80160003-4	88.5965173714184	0	1.27955995906441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77286792-1	3.384595464442	0	1.40688712814527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89043081-2	6.8410160715263	0	1.34322618778331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30719106-4	14.4708835347693	0	1.27906180013894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151951380-2	3.78914181258456	0	1.3929116552096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107261060-4	13.6559795801717	0	1.28171817506927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30582763-4	17.5483937371735	0	1.28624514717643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45903488-2	4.33558841266377	0	1.36490504741979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80763684-2	10.4773863194686	0	1.35094857432424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84275508-4	29.9241033618969	0	1.2804765152345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101182771-4	23.2697404075846	0	1.28286864152734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7332068-4	23.0643200091746	0	1.28183786725613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27547405-4	20.1331168450856	0	1.29079820664663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64360651-4	9.92408131458552	0	1.30851848141963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68119479-1	1.97428459666552	0	1.43830642937669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31145686-4	22.3288285517564	0	1.28160928371944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97555441-4	12.5318873060718	0	1.28720526809574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115428204-4	29.104674443062	0	1.27599751639145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86663719-4	14.9593967191812	0	1.28783615370986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124705254-4	22.3857845998147	0	1.28111667308294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25354933-4	51.004864474314	0	1.27959113458265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37106391-4	17.0677611782467	0	1.28949146513093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69079064-4	30.2091292028726	0	1.28234726461717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3706749-4	18.071856475022	1.07254661273995	0.583071986680465	1.83947546313475	0.0658452836480835	0.454209427348006	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93200334416208	2.8791003123656
Merged-chr17-65717667-4	46.6944935206281	0	1.27950513469407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-26792045-2	5.10747568757915	0	1.34220024802183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49198968-4	48.2195012466097	0	1.2753442153018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101198513-4	8.35894475042986	0	1.30943657058259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43077208-4	21.7105769230626	5.45880955623931	0.912156841644218	5.98450760551165	2.17045448421096e-09	4.80781419407625e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.43155652185179
Merged-chr11-103382099-4	32.0130138537412	0	1.27806254474744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88200358-2	6.7422017731219	0	1.37962900925171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44957417-4	21.8586595315975	0	1.28866323989404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124272368-1	2.10581392561466	0	1.4748643275445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94471665-4	39.7111354696802	0	1.28096044287598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64199019-4	14.817380170447	0	1.28197640385022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71327295-4	42.8192862754796	0	1.27506210976159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79224687-4	12.5241620814046	0	1.28627668028805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26799782-4	69.7078342358958	0	1.28078708705637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28537138-1	3.84028128108368	0	1.37030789217964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38143711-4	15.7055763507582	0	1.28792614553683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85257466-4	43.6121058405366	0	1.27712586343777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83641343-2	3.6148199089263	0	1.48117885827821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16312861-4	18.2591654909279	0	1.28634655050157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79138117-8	69.163348289537	0.000558753304003141	0.187371632879826	0.00298205921256772	0.997620664521336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45140607961762	6.45102786450192
Merged-chr8-105393380-4	28.1101566887827	0	1.28366597072396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60855225-4	48.0223209977729	0	1.27816632703474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101145628-8	80.5059883844168	-0.422972296444868	0.207020435564362	-2.04314272304469	0.0410383117336476	0.322163565418901	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.57382252110146	5.98264139318832
Merged-chr9-37247631-4	26.7175173855698	0	1.27893592541567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4202602-4	12.2064778369167	0	1.28405931285726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74881003-2	3.87355007281601	0	1.63276320111805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5613815-4	26.5678196186009	0	1.29245517556385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14668090-1	2.44571478761196	0	1.41857523459254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99151532-4	17.6849103237195	0	1.28269916145423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43668099-4	37.3374175583989	0	1.27337412151846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122894764-4	22.4741970546193	0	1.29061621173089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80603273-2	5.51959988011431	0	1.38477944398607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76341896-4	24.3110472298591	0	1.28100181674017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55986733-4	21.9096660184117	0	1.27990309437741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29641216-4	30.0803486895468	0	1.28209750952301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36639923-4	36.9543566096016	0	1.27490228877543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143829599-4	17.8646428718598	0	1.27860996335666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107886921-1	2.2884891735965	0	1.43040279034075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107960935-4	25.7631698576075	0	1.27669251268984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88550364-4	27.8343698695413	0	1.28181678315727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164455074-4	46.0035827360943	0	1.28420618499087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158166792-4	36.4298822879705	0	1.27585693094544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53564418-4	32.5933656151102	0	1.28960146672509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126482626-4	46.8572466460933	0	1.27832899459631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97880669-4	25.4109146327725	0	1.28052045074164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54798618-4	16.5915628974663	0	1.27688353372753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144215470-4	15.2180614558818	0	1.28517791484851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24306799-4	23.2743924449406	0	1.28893212110901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66954350-4	28.6857256574021	0	1.28452345833201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106369541-4	15.7450485921188	0	1.2994483425582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68787378-2	4.35013514356595	0	1.39069837729168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58323302-4	17.1028119723751	0	1.28696037270579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103396824-1	2.74954705296699	0	1.374667632993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-107004204-2	4.43073110837902	0	1.36145281430917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135702802-4	35.5278308528214	0	1.27941980164538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125450343-1	3.14467712003002	0	1.43817345984407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40954908-4	26.2016890744976	0	1.27632517546856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51678949-4	13.2972891692547	0	1.28780038240717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58353206-1	2.90539146555996	0	1.45760240705159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84774822-4	30.983468341788	0	1.27955100449019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9631814-4	34.9855879953008	0	1.27555189818003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16313039-6	54.1838530954171	0	1.27718547818653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90014843-4	11.0610005489511	0	1.29423962555057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78668926-2	2.50659851631459	0	1.51806680811496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99479445-4	17.8100806530167	0	1.28466174113157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167698058-4	40.0452234330218	0	1.27812290502553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7734147-1	2.33837352495378	0	1.40785945723003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59198978-2	4.11151073037228	0	1.33612665273298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135753147-4	21.6378556786625	0	1.28246175132308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125116714-4	43.7723053865756	0	1.27645333916636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144301690-4	8.66377363242359	0	1.31139726823628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19351993-4	29.6984284080407	0	1.27653438647485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25550852-4	28.7994983454198	0	1.28164424137346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123696406-2	7.67715450798432	2.05430403046779	0.783876461238748	2.62069870961733	0.00877497747259774	0.100228924650301	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4366045761601	3.27475795090983
Merged-chr10-66930864-4	27.374715092818	0	1.28059475251623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38187165-1	2.06371216432519	0	1.53722575981843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149170787-4	13.40776815428	0	1.28363217529011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50779843-4	14.415587797444	0	1.28034961422522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96548087-4	22.5370755530882	0	1.27834458605859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75142759-1	2.96976840770259	0	1.37923037325571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24629436-4	40.7845681670949	0	1.2852517892116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144245686-4	27.5352022663606	0	1.27687040843545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83267698-4	46.0568193180516	0	1.27901353062833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4723033-4	17.4096339701591	0	1.28175613536793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13595004-4	37.5389921948102	0	1.27826140178541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125555623-8	114.400253970052	-0.114831591916849	0.174509536840118	-0.658024736046691	0.510522236544378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.80982493782651	6.64947215254084
Merged-chr10-30751786-4	25.8004374958739	0	1.2784543502058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124682430-3	7.98507993403796	0	1.30963611463532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92439949-2	9.27685173416311	0	1.3279431799659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-93068036-1	1.18680806847177	0	1.67922071094207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80335876-1	2.29533891810574	0	1.52698067952447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80758850-2	7.17226711154936	0	1.34373060969273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100461782-4	31.4130545641668	0	1.27788983835381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103979618-4	25.0548078583017	0	1.27965825569006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80061310-2	6.30854097979745	0	1.34252849016956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125405122-4	15.0162946016245	0	1.283613677547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-41258695-1	2.2968412686676	1.09453760674227	1.96613787309792	0.556694228679742	0.577736360762679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816279004064202	1.57215779683075
Merged-chr2-48689265-4	11.5942717340404	0	1.28458435669806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78298297-4	17.2619296434108	0	1.29029690533312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-20898890-4	10.6611842180513	0	1.2858509880663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126599150-2	8.61116833073247	0	1.57801172310842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-39268932-2	19.6846613958347	0	1.28509559537427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34646478-4	11.5179429800764	0	1.28687847690695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55812742-1	1.53431829050921	0	1.75882724813926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63899767-1	3.34806906340014	0	1.3565662316897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19496376-4	24.0182982707022	0	1.27523043194779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56756307-4	18.8752240148139	0	1.27968417260872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152531933-4	22.7594420220563	0	1.28051925571866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116627995-4	45.1925247079235	0	1.27904577344388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90574403-4	48.6845724658642	0	1.27922636350039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53267818-4	41.1923847727125	0	1.28259567089063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-67557411-4	75.3944877067213	0	1.2770195788264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36808004-4	52.0437047950383	0	1.27645668962822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40317356-1	4.46312860361272	0	1.3543397906446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77442829-3	34.8936783721766	0	1.28196448401145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6193214-1	2.08361602975905	0	1.46904773887383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51376804-3	21.5653079969431	0	1.27925065973355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88264872-4	24.6863044183574	0	1.27898310553015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55161518-4	11.0504068077588	0	1.29457380673747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126908946-4	30.6823857029122	0	1.27729451044932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122946942-4	25.8047339736259	0	1.27684164206395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150061032-8	161.448776367995	-0.00841912638786464	0.199416168641743	-0.042218875456332	0.966324215536741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.03909510311813	8.03036527619699
Merged-chr19-11329666-4	19.0735201357712	0	1.30152698818493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15583264-1	3.30138961361298	0	1.36420433744819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101752578-1	2.75312940278094	-4.59103971016068	1.23933459457995	-3.70443924525218	0.000211858875782135	0.00571835196070193	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1200275990241	0
Merged-chr12-100005460-4	20.6887724894795	0	1.27705210775984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79549654-4	16.6617115684346	0	1.27921485958304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57796058-4	21.6804379424629	0	1.28211040446795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132282226-4	13.9628277385731	0	1.29087119634686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46063252-2	13.2813461809196	0	1.30170239974141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105369036-4	10.9734129910934	0	1.29169250067316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47315633-4	48.3484290039052	0	1.28486873823431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110941828-4	36.0066126900704	0	1.27652191639307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35680459-3	12.1588068698289	0	1.30757230091596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102701677-4	40.5121872402239	0	1.28304719495187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46140519-4	24.3623393484439	0	1.27769737231177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94428131-1	3.14608628150621	0	1.34779195968255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89415986-4	15.6303488531452	0	1.28457909337848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3177337-4	26.0765241849511	0	1.28471269690898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100875879-4	10.753793322668	0	1.29038864687224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40097657-4	22.7938137871222	0	1.28107472558707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24629041-4	35.531650058036	0	1.27419511410414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60870643-2	3.7928076701746	0	1.41022802800017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106317137-4	18.7815678245485	0	1.27861222416931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32215056-4	28.1329532894207	0	1.27902931870985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51209987-4	40.7779345217225	0	1.27708981385724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66186780-4	17.5330954771871	0	1.2893963306801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99146013-1	3.41114846456189	0	1.34557568096163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94779342-4	20.3530071689536	0	1.28590128865011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10321294-4	37.7640126683569	0	1.27840005729164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32184736-4	43.1198005861966	0	1.27601640587708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112581280-4	40.3323878765926	0	1.27519763732891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132102864-4	24.8569089508175	0	1.28414792332887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167247213-4	15.5339466304252	0	1.28099197470931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51921576-4	30.1346768390291	0	1.27830082579247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79060550-4	20.8570081954914	0	1.2853631686449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94544109-4	15.5220524393438	0	1.28874176783409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22761441-2	5.78842368991872	0	1.41023441948945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114885246-2	4.3726911654774	0	1.31938013996125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96654931-4	20.6360375800446	0	1.28590407448031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118632542-4	12.2554123202255	0	1.28235027690552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73875177-4	37.858628653413	0	1.27904737227396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69586052-4	28.9533845582431	0	1.28412802431777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40022934-2	3.99383394212956	0	1.38010535022812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82470253-4	9.96191613415915	0	1.29659674835099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21596632-4	14.8657530341122	0	1.27984311975186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83480990-2	3.03829477642353	0	1.87975837345359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104361941-2	6.9967632567499	0	1.30792772059813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23911518-1	3.47981674663084	0	1.37752990054113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130873958-4	39.701326229621	0	1.27433962649795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116018064-1	2.48710608954036	0	1.45073142679175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63846021-2	3.53989461433261	0	1.41896606982473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47511233-4	41.9454522003153	0	1.28198301127157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128016321-4	43.3495739021475	0	1.27841645899925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48766740-4	31.6420694393963	0	1.27894712365194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21619478-1	3.10745103925904	0	1.39106977657263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20648565-4	48.3259877549268	0	1.27516900953251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119028415-2	2.47129257347807	0	1.51763553226857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89449009-4	17.834767934648	0	1.28142073540946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127587895-4	26.1631854800679	0	1.27699758361497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64858944-2	4.54041617340476	-2.46710980605806	1.17898748828415	-2.09256657137947	0.0363878632740183	0.294829673094111	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33591366315694	0
Merged-chr6-88108232-4	32.895679853589	0	1.27563105094743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57232529-4	31.8420132393223	0	1.27675852511824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52476391-4	26.0959164029926	0	1.28340953583101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-27178444-2	2.72690633299111	0	1.39555323048822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61911491-2	4.56077241588975	0	1.3613688880662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47275843-4	25.4254411004205	0	1.27782182557152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52897243-4	32.8600671579846	0	1.27872883148653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21636028-2	4.92345681883375	0	1.33858495399872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74658983-2	5.84932445258347	0	1.42065527135033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143830167-4	46.9822277186139	0	1.27690269762323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6247841-2	3.38972740903963	0	1.3510034491611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133443678-4	28.3317836218427	0	1.2840081861894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107087587-4	32.7839595895953	0	1.27578038084163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127355426-8	132.054020586032	0.290044733701989	0.173645832392758	1.67032361045071	0.0948553542724919	0.595887135194218	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.62951841613105	6.89531423903096
Merged-chr1-7395673-4	33.1466732771246	0	1.28077384304737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25268578-4	23.9382982110857	0	1.28576325192476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140735474-4	48.6512364358803	0	1.2763902682213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34869701-4	48.0473730713186	0	1.27584011887965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3349574-4	15.0679330945542	0	1.28789993304451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45197567-4	28.5093588385711	0	1.28890058930044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96690493-4	16.5742750999189	0	1.2933159572438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66454155-4	13.5358808305155	0	1.28157060422582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170316562-2	4.94072993100593	0	1.43991320452794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-21532252-4	22.625188843281	0	1.27915527081066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79509133-4	15.4098051162327	0	1.28079599073291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54223438-4	16.1254617073805	0	1.2797173881561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166786799-4	11.8656658117157	0	1.28780261642518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146658473-4	12.9112453840673	0	1.29148000179359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152791142-2	2.99869494077848	0	1.46009837622689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75782190-4	31.802771257257	0	1.2803946068803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119470997-4	11.5647190963587	0	1.28870931131309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34839435-4	21.138951884962	0	1.27836581153001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8003262-1	2.77094617080239	0	1.37748232244196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95835423-4	28.0829345213375	0	1.2793294942242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12867026-4	36.566490478697	0	1.28277294322366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169730827-1	2.18276016997446	0	1.55007826845364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34643351-4	45.0884708994678	0	1.27421870854419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77314930-4	39.3340677582511	0	1.2783700392887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134920363-4	35.5574007995459	0	1.27836630017274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125725554-4	27.8280109338107	0	1.2798875248573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11524902-2	9.74814613872187	0	1.40304435612374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102748321-4	36.4757094635938	0	1.27306403704625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32558264-4	18.8498591320392	0	1.31153344888044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84650833-1	2.26333465327923	0	1.61395998244799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128780384-4	40.4088510170814	0	1.2763228614835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3740323-5	18.8062904402847	0	1.2838737264673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100614288-8	119.019217755967	-0.373119019585766	0.197980822145751	-1.88462203329512	0.0594808854144231	0.42097237499089	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.45615707647307	7.05128011459325
Merged-chr17-81630640-2	9.00813537726344	0	1.38043944974099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34347792-8	121.332665237659	0.448882481321304	0.190273569034134	2.35914259452807	0.0183172157887469	0.175070467007672	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.89979217307061	7.34819117362152
Merged-chr4-129068249-4	31.6238063972921	0	1.29751798658706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128065774-4	13.3344709330278	0	1.28937984683267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121929500-8	68.1517461627377	1.34829520334345	0.19312269521678	6.9815471549317	2.91946879840898e-12	1.67347024649853e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79568397683342	7.15789629417199
Merged-chr11-100363358-1	6.11792482238158	-0.722048891406332	0.685978369113287	-1.0525825943166	0.29253233792447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70615889383664	2.04937768295532
Merged-chr8-10845972-1	3.34084592835871	0	1.34803066375321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31742367-4	12.0819670341525	0	1.28927021081728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116476507-4	21.7912504471198	0	1.28072999055865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46985883-4	10.6047669931381	0	1.29036147208725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142443675-4	36.4411018400484	0	1.28341360539486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76472610-2	4.46552461368384	0	1.58557933137911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43353226-4	35.1056285043115	0	1.2843574243253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57094867-2	9.22299322399048	0	1.35513339030138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67158937-4	32.4032538757865	0	1.27764636954796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91585682-1	1.61730530309252	0	1.515664425249	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79088206-3	20.8556890332318	0	1.28206597298069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22868239-2	9.21262193339485	0.594811603173552	0.789767153072378	0.753148065046256	0.451360943945538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5797352670046	2.1935786047746
Merged-chr19-41339314-4	68.0056899927553	0	1.27452432618774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51533583-4	15.5679295945815	0	1.28971256429504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145806464-3	23.8084346583483	0	1.28052159120249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146617199-2	20.0650605786675	-1.50214332826917	0.437129045888656	-3.4363841579445	0.000589534402752887	0.0125076997020422	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89337413994684	4.24415207139758
Merged-chr18-38443744-1	2.96686256994352	0	1.35654297596752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-54924970-1	2.2008680147176	0	2.0553310287744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85553275-4	29.5154961530454	0.448151264583031	0.517875568765819	0.865364754802101	0.386838619443488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49218069873872	1.92891808839758
Merged-chr5-99374661-4	18.7921502669522	0	1.27771329947368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123564168-4	27.3731548315875	0	1.28618353244497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13538400-4	35.4548002713948	0	1.27980892050018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62623402-4	26.9128620238994	0	1.27945787013578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102959524-2	6.81170955382613	0	1.604530040136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74684131-8	144.007893686808	0.464511562931003	0.164143406362887	2.82991302071594	0.00465606602027502	0.0616400506808937	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.90491706767051	7.38428149204722
Merged-chr16-91880668-4	21.9887037237288	0	1.2843719951739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23052727-4	28.5923347074179	0	1.27953282192357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79678816-2	7.33724301006598	0	1.37164019845485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166021273-4	22.586097372273	0	1.27824097803639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59089932-4	19.6762096416919	0	1.27692954534861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7221665-4	53.3034161960598	0	1.27657174026575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70372620-4	16.8562274483953	0	1.28433036454545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153803745-4	27.1720101058312	0	1.28070713189518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115192833-1	6.6874822763509	0.131884966743478	0.704660819999011	0.187160919126542	0.851534465366152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97888813988696	2.57151361581017
Merged-chr15-27596950-4	15.4897308310608	0	1.27793814581823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85525187-4	50.7726119267761	0	1.2802068514735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74368442-4	50.4543752191048	0	1.27688231648518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86570447-4	18.5271075481967	0	1.28223733014562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119492127-1	3.36079227336506	-3.81783343535061	1.13155453598717	-3.37397210115014	0.000740918765048582	0.0150034327923349	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49576996983973	0
Merged-chr3-75276719-4	29.4652229697979	0	1.27678005349849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91562200-4	17.9425946341187	0	1.28480808500622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94605659-4	16.4285655185335	0	1.28289479320938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57280407-4	16.3376830652849	0	1.28870331700383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140844239-4	21.1055515659749	0	1.28649795479368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88315089-1	6.75826684468798	1.40799987906189	0.664370918410743	2.11929788021125	0.0340653006963357	0.281704775917838	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13356148204759	3.56690622832005
Merged-chr9-108259992-1	2.30345135539344	0	1.34872004235362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135479377-4	35.9783355010277	0	1.28342687286671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22815393-4	12.1223468907503	0	1.28278513685597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115689616-10	105.449544743891	0.0952259097198229	0.160784875076847	0.592256639029696	0.553678747121732	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67447137283546	6.73456134790601
Merged-chr6-99490044-4	27.6307606654994	0	1.27431780711528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-61680575-4	31.3686716751289	0	1.27476367428268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122811058-4	80.1835802583675	0	1.2809629924908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88112440-4	55.1955658731169	0	1.2880653501241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70054328-4	40.2181631016089	0	1.27580178725355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93798810-4	26.8519291149602	0	1.27916737691881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117412238-4	19.0533824432634	0	1.27729108450294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7738057-4	31.0338059426784	0	1.28884954672577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74987222-1	2.84491139835827	0	1.40259106594791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125252442-4	25.9922625781628	0	1.28232265743916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-114473795-4	17.7063591808942	0	1.28353331845724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80789263-4	14.7327237784187	0	1.28493646254934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123266039-4	24.085502899433	0	1.28773308492648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21453207-4	18.6237662764852	0	1.28373455716599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108641203-4	20.2376423836747	0	1.28191777170377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85988524-4	22.9104565813363	0	1.28097357061086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50415842-4	17.755147606344	0	1.2834031532642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45185402-4	9.60807585715873	0	1.28954167558519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31771358-4	30.3926094473008	0	1.27450551182482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80949235-4	34.0305982858162	0	1.27798439249925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21235501-4	17.0699838853638	0	1.28172258350239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59071604-4	18.8999090447987	0	1.27999492423729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142611331-4	37.6757975816555	0	1.28260607946033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168540042-4	21.3498466692542	0	1.2804419933606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79696683-4	30.5102919120376	0	1.28180582833018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82785365-4	14.7972216822607	0	1.28361576978993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128393660-4	18.6912303936244	0	1.27857571114028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19094507-4	33.2053647570378	0	1.27648270994756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39718660-2	5.22824171597919	0	1.34820032173361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94370951-8	84.7525960086979	0.241925131832188	0.190230575886564	1.27174682989158	0.203463085940855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47860139834949	6.71419036734526
Merged-chr4-107364309-4	14.9094062380434	0	1.28734570030977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46830536-4	13.2626391799646	4.23436231805331	0.989941377049214	4.27738694050244	1.89099944128538e-05	0.00084060713938935	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.11197723984608
Merged-chr5-25663344-4	11.1061260167213	0	1.28677253952003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21564124-3	32.0397598132958	0	1.27551713283178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26963562-3	52.4317712404919	0	1.27899622686913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65681093-4	15.1528759811858	0	1.28138314896239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69634754-1	3.04129194021484	-0.817310547030609	1.47610359026684	-0.55369457294177	0.579787890041553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0
Merged-chr17-71136828-4	11.7011901268013	0	1.28285833277302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139024659-4	38.4023955649059	0	1.28182489688827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38364854-2	6.54443569083317	0	1.32426906454533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68825572-4	16.1423793704504	0	1.2782656405879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59864877-4	44.6004342345646	0	1.2756375381935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70024886-4	35.4660042430982	0	1.28082572544227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117288382-4	22.5244888265761	0	1.28178229164797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-114380185-1	7.75219799614309	2.49084729277175	0.929924760541261	2.67854712387909	0.00739423267166058	0.0875967237422647	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903383975461927	2.40949193645596
Merged-chr2-124576234-3	19.0399625719859	0	1.27731759261277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113869407-4	15.9232491887808	0	1.28044939133924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35705037-1	2.57356375746055	0	1.45609105100896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80079052-4	44.0851341093859	1.32888958896692	1.27808498239582	1.03975057000972	0.298455799371861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr17-13145085-2	6.83725825789451	0	1.35099650639674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82016613-4	31.1658214252196	0	1.29157798158202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126941308-4	14.6861264952745	0	1.28496398536673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39003716-1	3.68659298833759	0	1.3336089492443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-11029-1	1.85781253945208	0	2.10035592915057	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59240177-4	56.7922915588797	0	1.27890672839263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121580794-1	5.64956125927658	-0.336514397609157	0.720266455704667	-0.467208204608017	0.640350924178881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68229650273152	2.16596752412581
Merged-chr4-9116025-4	30.8666989926839	0	1.27679990862496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157840760-4	23.8133816254142	0	1.27868991943059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21590974-4	25.1827530147786	0	1.27897386139218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104074878-2	5.5005203461548	0	1.37624678035673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21595905-4	28.7151547635484	0	1.27722853670356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127561276-4	17.7323026903217	0	1.28231068187068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91034745-4	24.7979523264737	0	1.28067835863234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132008845-2	5.3512559592329	0	1.30873835914321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4315317-4	18.9985124742112	0	1.2902419201855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-39848132-8	270.315643117034	0	1.30669664216434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5110584-4	13.5497173755059	0	1.2878277323485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131855156-4	33.1456843439786	0	1.29325566834383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83824554-2	3.77644843501676	0	1.47834850496575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-137421504-1	2.48395532704183	0	1.38497316396204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54952728-4	14.2400536630407	0	1.28481528281726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-178498130-1	1.88222618976661	0	1.45729747660545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125286413-8	156.103593899206	-0.758007944928984	0.160372204139502	-4.72655438637995	2.2836164888144e-06	0.000154637516143073	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.1200823063791	7.35820845378483
Merged-chr13-74245690-4	31.0381336835605	0	1.28725071561829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73755914-1	2.94138126383555	0	1.42210523202066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58763296-1	3.16435650259212	0	2.26275361860294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3139152-1	4.64953360495071	0	1.38485876222176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38403818-4	25.4124137155725	0	1.28010728932855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90677440-4	33.6395274865022	0	1.27489377263438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59427405-4	13.8820901723281	0	1.29134643696518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80963373-2	5.83107673905949	0	1.38308161214539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3344387-4	50.2060311330037	0	1.27807468637839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56729319-4	15.0723864796724	0	1.29577040434874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118962245-1	2.34790223948919	0	1.48946609439573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79154190-1	8.3109327515548	2.47280286153652	0.653736153152764	3.78257015404604	0.000155217326703729	0.00448251393305376	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03576903979052	3.49563079346334
Merged-chr13-52652008-2	4.16720242677223	0	1.34236513751279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121591266-4	23.5249839130031	1.32705994987196	1.27774301018674	1.03859691604027	0.298992240684416	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr2-6086022-4	20.6234592728911	0	1.27986666479919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42073473-4	25.0022973881306	0	1.27677927468333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15463596-4	15.1361780730583	0	1.28977664834504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56592855-4	16.9976558088415	0	1.27922394554325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73779982-3	19.0062723452508	0	1.27976596860782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30922801-4	16.1702645725817	0	1.28267152610151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40379699-4	12.5579414613141	0	1.28681795773792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29628731-1	4.82290609756486	1.17300524396441	1.20369079342209	0.97450711625828	0.329804807500104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.781596303653021	0.961728545204858
Merged-chr9-78527521-4	58.3913535468125	0	1.28131061758223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152362423-1	3.04201892335676	0	1.36854237891867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150782557-4	22.9498333409581	0	1.28421515906867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24752168-4	20.4076337148576	0	1.27783251447136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141953022-4	31.9455861391271	0	1.28074163720641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126905837-6	60.4642429438409	0	1.27464352699402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142074316-4	17.9184557201911	0	1.28396010318264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71011141-1	8.77061402626128	1.3889718175631	0.684378140916385	2.0295385467795	0.0424034669660461	0.329437278844757	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64732572714986	2.51897623717264
Merged-chr17-88435498-4	12.9498832620756	2.4332014612236	1.16407849013554	2.09023831454896	0.0365963973465592	0.29607876451755	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-39525955-4	22.9339175928715	0	1.27693668627538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44970318-4	33.7355577235199	0.131057377231812	1.28152143166683	0.102267019492097	0.918544732655662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr17-57334967-4	11.1258364580455	0	1.28644215232858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6412550-2	3.42107939152036	0	1.40777668100607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110606339-4	12.6634094145873	0	1.28258323311371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-98667161-4	138.937574826159	0	1.36574123573437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77565990-4	20.2756768176284	0	1.2881708495068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133841211-1	6.81453336190081	0.576932630576774	0.573847909049717	1.0053755036455	0.314716070801365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82763316561556	3.22632275474596
Merged-chr15-67903182-4	19.6031076331567	0	1.28161539667148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84350433-4	61.2990433628864	0	1.27542055684702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21382350-4	33.548337660301	0	1.27472645644985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90569381-2	4.49300874135689	0	1.38120479588654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59554832-4	20.0273446617995	0	1.28267429348502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49298603-4	30.329887880611	0	1.27900957573692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69507574-8	39.9160758184106	-0.159708412927939	0.253016508558116	-0.631217361420729	0.527898411643117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47819397077413	5.35708394537366
Merged-chr16-97472642-4	27.0403922318443	0	1.27965975448601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87749651-8	109.822538495522	0.117226938071941	0.200813748175627	0.583759524120916	0.559382113598865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23348541196955	6.32401634824529
Merged-chr11-59525471-4	13.6833056515249	0	1.29169752125773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11346401-4	20.7650456209568	0	1.281074581994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132802453-4	21.0346413787348	0	1.28593439137323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30674955-4	35.8570195865753	0	1.27622068119658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82987934-4	25.0832488741166	0	1.27800323527872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-18610065-4	28.1807359486477	0	1.28010137386759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34389670-4	22.1130194150691	0	1.28458749556168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108797954-4	16.178335540234	0	1.28478042139331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101900765-5	30.0779684567972	0	1.27591750380743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22136729-4	24.3769201962644	0.296865701539629	0.404846782881041	0.73327914186948	0.463388194030414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.394843933214	5.71122094811404
Merged-chr11-49984084-4	17.027908237247	0	1.31374283548298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58477794-4	29.5298222038009	0	1.28318414217905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6293486-4	48.9952843574769	0	1.28338500899943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103709177-1	2.74318756054179	0	1.44501233911274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18936431-4	54.2626296775757	0	1.27729655578347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25320536-2	4.51045920698115	0	1.36877853333369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91765733-4	12.5972684833373	0	1.28499784374739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87658185-3	8.51433378826473	0	1.30644873755097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38714172-4	15.6531386227994	0	1.28313614724835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30789141-4	29.0282953415139	0	1.27692717679371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36231540-4	25.9572093974245	0	1.29300928684911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102443783-4	20.1488750297354	0	1.28644421247186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50305180-4	62.0297850808039	0	1.27844238055786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127851044-4	38.8219608468527	0	1.27782826519206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119028832-5	41.382756087263	0	1.27631533718781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132115928-4	15.143156915591	0	1.29182605928134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97352827-1	2.62349514565461	0	1.47872118597136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148685931-4	43.5967725460072	0	1.27459519296356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3163847-3	9.64965114286548	0	1.30518483722031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103017309-1	3.20041218785062	0	1.38944333426221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72604335-4	32.8633450365098	0	1.27264970574686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21936083-4	32.588454771774	0	1.27539827805414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81572987-1	2.34400170822516	0	1.35649883563789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117322146-4	14.0412994404694	0	1.28161832445002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152787050-6	21.7627567618342	0	1.28125072353922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112318341-2	5.54230161093053	0	1.49063995085266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145359711-4	21.5910045178453	0.337719398966979	0.291997609595182	1.15658275228754	0.247442872333008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53423457748437	5.84934829243579
Merged-chrX-155172533-4	12.5720424678063	0	1.28679190164326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53401256-4	21.5982922169333	0	1.27662136431429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80475479-4	17.123736862226	0	1.28193023093825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9649598-8	64.2515994666193	0.259314171057794	0.250213466699726	1.03637176079331	0.300028739462472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07447634044502	6.19455369819848
Merged-chr2-18835704-4	12.8538278757853	0	1.28287107536349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84043620-6	44.9372969910158	0	1.27268909621661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118747967-1	3.95848492949519	0	1.42617619060487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61977451-4	35.8031713477083	0	1.27773173511275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141309344-4	21.7478412657498	0	1.28084140114195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123322579-4	55.0036077044976	0	1.27429389161175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6061346-2	3.31542937980014	0	1.38320129362965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13988421-4	41.2675851890174	0	1.27531167011487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95902383-4	17.6938463091669	0	1.29062602276299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55643699-4	67.7216072460046	0	1.27544876667122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-56171300-1	1.46873013484573	0	1.79997422181539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79870692-6	40.9568852310402	0	1.2731485759147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63177008-1	4.00118689541731	0	1.32347348575127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102863430-2	2.41281060227176	0	1.39947493377824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100840204-4	14.5190088867115	0	1.28240198668416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150035476-4	10.4179099039303	0	1.29708558368263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37204194-4	23.5932115419268	0	1.27775683377142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33560476-4	20.6053637364061	0	1.278518065639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126615980-4	23.1313398206393	0	1.27785300545472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13413719-4	33.7429963938289	0	1.27764523783973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101504732-8	60.8597592416671	-0.395065435245822	0.197206742533684	-2.00330592235376	0.0451444622082884	0.344385947637499	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38051018944804	5.9904759582106
Merged-chr14-61518879-4	26.046647989416	0	1.28943691562978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149862907-2	4.72708327020924	0	1.39883092023519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58321498-4	36.7233801985683	0	1.27823555911757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53255534-4	18.1055588274053	0	1.27881163411929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24756560-4	47.8112607995975	0	1.27811200984874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126587026-4	15.2390041940491	0	1.29148956436586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144247491-4	18.8623067583141	0	1.28234099463329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173337830-4	26.4991518749564	0	1.28670940196968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112130401-4	16.6439869975101	0	1.28356894304725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69502174-8	101.447721857133	-0.609676979304623	0.180921296904088	-3.36984639032205	0.000752100969506823	0.0151925309528935	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.93943004280055	6.32542997449986
Merged-chr11-117109854-4	25.3111212252316	0	1.28335330840505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52080137-4	50.4847158168339	0	1.27452868615386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98005499-4	14.4892337900161	0	1.2896244722754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95572826-4	86.5484584075241	0	1.2779882021026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60810784-4	18.1247580939417	0	1.2899167451949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84827904-4	17.2001066932783	-0.0660267643039365	0.705146427622863	-0.0936355368437744	0.925398679297283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39878821896267	1.40918939303534
Merged-chr13-74523049-2	10.4658430616978	0	1.29355244901163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24469669-4	25.8119753176636	0	1.28132985615501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36287003-4	30.9999103055633	0	1.28041885989836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44453495-4	12.2158565954717	0	1.29213363011106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142935797-4	15.4933531428791	0	1.28186166431357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182504426-4	28.2891464104061	0	1.28253237854412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51221274-4	19.7768559851486	0	1.28329189263493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100440875-4	21.5387748042837	0	1.28384093857807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-47954965-1	4.39071541869404	-5.35371653540647	1.08932519178925	-4.91470919405877	8.8914339557745e-07	7.32685552678487e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07504842261409	0
Merged-chr7-41599253-4	46.5384583118084	0	1.28028832130608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122565272-1	6.16435074059507	0	1.32268448295447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167680117-4	12.5001179928096	0	1.2872289930937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79160090-4	11.5662486602074	0	1.28399716858053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85502605-4	19.9232274609102	0	1.28650025855211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-39431742-8	74.4136383529777	0.322203010647607	0.194603858059392	1.6556866542146	0.0977852913641905	0.610186941318219	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19317937405804	6.51310777522532
Merged-chr2-11188454-4	18.9656043884847	0	1.28195745921853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88770476-4	16.753242376638	0	1.28435726905995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135315472-4	23.2006989366244	0	1.28451544885321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77795479-8	142.618355524062	0.403094194094121	0.172967588174108	2.33046085887703	0.0197818064313461	0.185727287796371	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.84733074156855	7.23841449809078
Merged-chr5-136030202-2	3.36862827217453	0	1.46638030709946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17901892-4	20.2572865663744	0	1.28181119099799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33467862-2	3.91489785343143	0	1.39925615341805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19844760-4	45.4321526024523	0	1.2880534215903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54754746-8	69.4839692456563	0.603362905304257	0.182544818537582	3.30528639562583	0.000948793945218326	0.0183106583414757	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03127624255526	6.62030919533647
Merged-chr10-111782528-1	3.49809992435138	0	1.33269283676976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-47623137-1	2.71024493686845	0	1.42718488094978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108937728-4	16.1322688153032	0	1.27984857857583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46430035-2	3.78960906998254	0	1.55649079015592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143757091-4	15.6440203943215	0	1.28978090937849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76097419-4	28.6738557112311	0	1.28183141445321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112230704-1	3.04176477222618	0	1.36305816596201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39443326-4	25.3555492102578	0	1.28298082821852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176818849-4	24.3190137476121	0	1.2767524838413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65726982-4	34.2631176346975	0	1.27650657249834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107857203-4	27.1117259088006	0	1.2777849415878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-30954-1	6.09354842585349	0	1.34033450409421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52009018-4	12.0177210567131	0	1.28450407071483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24199966-4	15.7269758436548	0	1.28758953875637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34778413-4	18.3921133920047	0	1.28374829819982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103370615-4	72.2448273817644	0	1.28576446757407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118470419-2	9.28390845441131	0	1.29178897964239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69513416-4	13.9769909782264	0	1.28348691809921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92867887-4	14.7713088382537	0	1.28441770703335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53222601-2	6.79938079436281	0	1.63607203221661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72558123-1	2.06418784179698	0	1.44938066347931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79181373-4	14.2102399977073	0	1.28468572898623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95770674-4	16.2528114586883	0	1.28167337692484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148464609-4	26.9823397186984	0	1.27858917423699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36116763-1	2.50702705410089	0	2.11645977757187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81176283-4	11.8326328945166	0	1.29718422930079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50687901-4	33.4742901683442	0	1.27769230122653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-16951457-4	44.8574204186597	0	1.27934274241408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75796616-4	20.3660974866104	0	1.27578225534885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43081995-4	12.9116388991181	0	1.28924471691075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35101767-4	18.5650912483056	0	1.27680163289348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104415757-4	60.9763149158575	-3.94646354110868	0.472193079835573	-8.35773269375933	6.3935110711976e-17	1.89904715662945e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.92939593091619	2.94771932792354
Merged-chr3-132171799-4	23.9320744648046	0	1.27814424862692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-42171033-4	14.1863441035771	0	1.28536893963524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37753887-1	2.09641106350016	0	1.60213435655953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75797915-8	165.219166708744	-0.706508679637959	0.171722233901749	-4.11425278826847	3.88435584866164e-05	0.00149397950139284	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.51006014277771	6.81191738689798
Merged-chr3-137947751-4	19.1415613244362	0	1.28197576139909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50396404-4	26.6058048828708	0	1.27506918589276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38472854-4	23.669264421485	0	1.27695693030242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60021770-4	18.8008683661496	0	1.27704339933174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-52053703-1	3.37767886281605	0.623580289728943	0.951761015108967	0.655185787009305	0.512348144088742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51387577754861	1.52944205045577
Merged-chr12-24758529-8	98.4634264313965	0.952340212180289	0.196942252202688	4.83563177291262	1.32723415994552e-06	0.000101675783605862	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.59472984315286	7.55659526522898
Merged-chr17-42937669-4	10.326132738172	0	1.28409962075797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64834471-4	34.8817377980851	0	1.28739039410767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27862925-2	4.44554076007869	0	1.37709466047006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63897024-8	86.7499830465656	0.0874829993132705	0.205813759611096	0.425059041137859	0.670793635250898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63798944360404	5.75000282479644
Merged-chr8-117267613-4	16.6398831700868	0	1.28559062034076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102426513-4	11.4684832099863	0	1.29729891381216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77444902-4	29.3636442175054	0	1.27746050054266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122815286-6	46.0251501254428	-0.605167605096566	0.355931260968257	-1.70023729708455	0.0890862993755825	0.568055554156598	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76210896908224	4.96301904795812
Merged-chr12-102252732-4	10.6130044697594	0	1.28774327040715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46615791-4	48.3164263790434	0	1.27542144412285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25321820-4	19.7776985863325	0	1.28331245409286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69182301-4	31.0480662823584	0	1.28880260435105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67347319-7	80.3422801616184	0	1.27594190267464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64046060-4	22.0525686863823	0	1.29179377586573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189871659-1	5.38279294587443	0.428878415725462	0.881240676504389	0.486675691624553	0.62648817428567	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19800528845271	1.45601292859778
Merged-chr12-85648183-4	29.2093566357487	0	1.27829684673802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61131490-2	8.86849537507545	0	1.30608279373507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117721643-4	23.4036422705894	0	1.28675824417946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42080167-4	23.0146777667913	0	1.29227331529338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30772828-1	4.41995978335097	0	1.32905205156161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-36014664-1	3.53131956352356	0	1.35931002394354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96976147-4	24.0494730350409	0	1.28556522797331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4450105-4	22.1259697926325	0	1.28184462525712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88346066-4	21.5075067204765	0	1.28059258551484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38975038-4	23.7972210176432	0	1.27985692705019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71127640-4	30.7540202176703	0	1.28616558679185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73716543-4	12.7432684637646	0	1.28257854146306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71187582-4	12.7974263803356	0	1.29157540342796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67451605-8	119.031421115949	0.114682409349186	0.198905788039135	0.57656647641959	0.564232350872772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.04769003033507	7.14616617685036
Merged-chr16-87735107-2	4.62416163592836	0	1.36732776461815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102113316-4	23.2808645745252	0	1.27584541883985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93394113-1	3.23914619350847	2.13795300781818	1.08509819392915	1.97028528826191	0.0488056835504078	0.364420349410899	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	2.16318252143804
Merged-chr10-108191687-4	41.3578116360157	0	1.27764535355498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151620868-4	26.4793137628354	0	1.27831993870382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89555621-4	44.9131748439405	0	1.28083539174707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79159554-4	14.0075176336594	0	1.29574110572263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78532232-4	15.8425208706273	0	1.28758809464587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12501261-4	25.9484729458706	0	1.27722828577769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29486721-4	67.8063302818898	0	1.27920150093975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11062588-1	2.34165165548294	0	1.52584465950196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107305091-1	2.56609690481499	-1.04822545778312	1.29422110418798	-0.809927650222332	0.417981759113229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77073862162205	1.486851288245
Merged-chr12-26398724-2	8.03344893884694	0	1.30767895710345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88068953-4	10.4163290744502	0	1.2832917519141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34378185-4	11.4200153789789	0	1.29837444962225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99336605-4	59.6433641588869	0	1.27815919949752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91711874-4	45.8884617768611	0	1.27568134219446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90694633-4	34.9994664135132	0	1.27996938287414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6870990-4	26.3997382790344	0	1.33336460630714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4913822-4	19.7679453584687	0	1.28074548962953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30604127-4	23.5566881050931	0	1.28167661343686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105011761-4	21.7155227200467	0	1.28180720806013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128392573-4	20.4430628621531	0	1.28609680057488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148686445-4	16.2335497878108	0	1.294058742807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8898538-2	6.47484131152336	0	1.33420006928503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55799016-4	44.9958895229593	0	1.27912243800452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32365402-1	1.79402747221528	0	1.4350316598607	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38021457-1	3.80810608766681	-0.397407765533892	0.804799739562381	-0.493797085160574	0.621449491925251	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74116589134979	2.42327745627261
Merged-chr10-120188717-2	3.26555616255416	0	2.1054129202795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118479319-8	126.91199876745	0.521375507104312	0.146683788642434	3.5544180575759	0.000378816536016923	0.00888200407698666	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.79607014014149	7.31855370819061
Merged-chr3-131691872-2	5.11649405802205	0	1.34742344269722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46524891-4	22.4286704535841	0	1.27922101324323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-89190574-2	4.19636318033622	0	1.39733427030686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44988806-4	15.5857746383076	0	1.28291217155952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98292472-4	14.8924136919678	0	1.29315820605536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66852873-4	32.1299507368573	0	1.27888220464802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160667509-4	26.6456532181853	0	1.28362553791628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9073957-4	17.780303498669	0	1.29166814074054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40093710-4	25.3291350368158	0	1.28218611690023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152406249-4	32.8978204325918	0	1.28088334030454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102689870-3	26.8158566360048	0	1.27581265858477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61561565-4	24.8450288381223	0	1.28501580346703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145037177-4	21.1352122687165	0	1.27771100510943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59784093-2	13.217079052925	0	1.29030579917414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23903042-4	23.0944975667086	0	1.27669679810382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112786423-4	32.0913873713658	0	1.28296397421494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54405261-4	18.6255149832131	0	1.27702586321439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99000790-1	3.77449373151839	0	1.34377718059866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120882542-3	12.0346187001783	0	1.29625710357787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106511832-8	69.7297064606648	0.221088090418206	0.222559261011205	0.993389757917443	0.320520050901234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51489452546973	5.67349271215894
Merged-chr16-25053123-4	34.861523837715	0	1.27388408762445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95323183-3	36.8830718020035	0	1.27345322053682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52847422-1	2.17727517708707	0.123844152053973	1.96895844745322	0.0628983065712544	0.949847483336748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0.683637474991079
Merged-chr7-122260293-4	18.1792731273336	0	1.27746082161344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73176035-4	31.9845852301995	0	1.2809009230837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95033220-4	27.2214091869903	0	1.27445349574755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39936672-4	23.3990074731092	0	1.27587777651934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71223497-4	19.9262064674442	0	1.27914429423433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3355569-5	26.540212855543	0	1.27667497391863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132607911-4	11.2883152160234	0	1.30183842685273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97962560-2	4.08706807656857	0	1.90297556546833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41943253-1	3.989908192996	-0.13665314287805	0.970725419092244	-0.140774250050893	0.888048285941864	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03240677813464	1.4944959016211
Merged-chr19-41341830-4	25.3165433050354	0	1.27566620566043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87849531-4	25.6181664074082	0	1.28313169436243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134679633-4	38.9188621349363	0	1.27643122599083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136558983-4	16.2789892063457	0	1.27871116651283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111517094-1	2.57299715254688	0	1.39929809436945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74570781-4	15.9506317307771	0	1.29150442611011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10532541-4	11.4361760694509	0	1.28216031793311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126845786-4	78.611094580192	0	1.27882191127718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126572496-8	51.2659211146631	0.617638897009815	0.232388902547562	2.65778137526772	0.00786568998396324	0.0917841745878683	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46033268299984	6.09827793473024
Merged-chr12-17679756-4	33.585049165557	0	1.27399204925998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117299119-4	23.0937978119281	0	1.28610020227006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39353491-1	4.23882114691291	-3.83007958818657	1.16326329657755	-3.29253024612319	0.000992902173369903	0.0189271252686784	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38842586955989	0
Merged-chr5-33002924-2	8.53415524794597	0	1.40220103837759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73957858-4	14.3962776626689	0	1.29663178542482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99006702-7	43.2858479373087	0	1.27844651895468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87724967-2	12.7030697249667	0	1.34378065500078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73603772-5	34.6218379777249	0	1.27397292257675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65076301-4	16.6917450459972	0	1.27764452987638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94612469-4	14.638590260474	0	1.29516103475633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50413406-1	4.56045214682648	-3.14391610412914	1.05346956612681	-2.98434449861525	0.00284186609820122	0.0426431664608941	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00942436307095	1.41083941945204
Merged-chr2-38479729-4	25.2561486163356	0	1.27975204019988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143115255-4	22.8876847537711	0	1.28678226608233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115857548-4	41.3616223639033	0	1.27771155047791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45486776-7	82.8508768889478	0.421971106887134	0.263708034175998	1.60014505513894	0.109566407858984	0.664784260719884	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56783917668683	5.89010690786584
Merged-chr18-20784892-4	29.7811887221608	0	1.28822518589213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19415787-4	22.1271844334568	0	1.31846138316816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122794375-1	3.47335148483592	0	1.89651214604513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10356955-2	4.27293797881969	0	1.37967626141976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94355560-4	13.3929830231615	0	1.28323785585206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25441274-4	19.1771260174676	0	1.2832379357842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31727663-4	28.6696324793307	0	1.27770375489867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93750647-4	19.919442976498	0	1.27749958750009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30831490-1	2.36711093592709	0	1.63594891680541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70925013-8	55.6394263950202	-0.0712302962210218	0.229417105508767	-0.310483806615282	0.756193071907201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98046524664662	5.85899858114549
Merged-chr14-118507497-2	6.17197732401048	0	1.33265332338062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92199652-4	19.1193291368115	0	1.28251155341588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44800179-4	20.5933613073516	0	1.27920498875094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44344852-4	12.7438924793242	0	1.28878995369613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11039007-4	32.5853528868388	0	1.27946753284352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84984829-4	41.4209997234098	0	1.28237160249759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15215054-2	4.95656649794645	0	1.30571318639868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4508093-4	48.3582630881099	0	1.27564363487069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24464563-4	19.5654312614655	0	1.29629934202024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52158977-4	18.3060834392989	0	1.28751191476138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99993706-4	31.8469660142881	0	1.28077419685463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45341514-4	27.367257025848	0	1.28647851854221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4863083-4	15.4322221851668	0	1.29353157806057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6060097-2	4.90550173444495	0	1.38224936397872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116552447-1	2.34462209337083	0	1.41161086356858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53414996-4	36.9462565216497	0	1.27441637803892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86078921-9	162.504272198916	0.192639255931556	0.198391529571495	0.971005447398067	0.331545565934399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60043584041429	6.78631825925247
Merged-chr1-43462881-4	26.3458201709926	0	1.27649911145868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55389869-4	31.1023045391351	0	1.27825275838809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75034441-4	30.2612573527645	0	1.27590966843815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32694857-4	12.6999576237871	0	1.28531039542885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47225545-4	28.1755181237774	0	1.28019922153073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59736205-4	18.434233410479	0	1.28822116438645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56151945-2	3.47288396694648	0	1.36831647792522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16491535-4	36.3351236645002	0	1.27643766178076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15021716-1	2.44812230873663	0	1.39852847790408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65635908-4	49.0293929870595	0	1.28192091274466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124928097-4	23.1788196233614	0	1.27488082631802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-137478449-4	21.089080532072	0	1.28314911002808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127480580-4	15.4379239698953	0	1.28354091521421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83870927-4	34.2906812587901	0	1.28190834504625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64789472-4	25.9045292486932	0	1.28180819642222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66199999-4	17.4262905047094	0	1.28024724036377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7863068-1	2.34872744906504	0	1.42431475250466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78490406-4	17.2717610376774	0	1.28019831792712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146135100-4	17.0429177199085	0	1.2855033583461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26895951-2	5.59404987081149	0	1.32275716245827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123815641-4	21.2314380338954	0	1.28361935290385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125458735-4	15.8984682885043	0	1.28302829796491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114827642-4	18.3495628350326	0	1.28542040675811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88031414-1	2.95222791259666	0	1.39248745961484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47734212-12	200.744497364696	0.419955832092572	0.163431365599436	2.56961587852034	0.0101811335270897	0.112438119226162	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.90714326943094	7.33983035771077
Merged-chr5-100566971-4	21.7117103704181	2.45399776182615	1.15852191207024	2.11821436975752	0.0341569167512673	0.282283784245392	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr3-133583149-6	67.4996745725652	0	1.2792217872535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7272205-2	3.67933610023536	0	1.34192355371818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14716511-2	3.35852447604492	0	2.12908281909534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-40531594-4	17.0643088392723	0	1.28024186979182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86819340-4	50.4598000213553	0	1.28575847935883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145774490-2	7.06079421852546	0	1.42018206884445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27199036-1	2.7536389205508	0	1.40778252045334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31151675-1	7.07899628031108	-2.57102937406758	0.778046851053558	-3.30446601073719	0.000951575135995076	0.0183534913921884	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.484369112413	2.15292080626044
Merged-chr4-150212686-8	164.689305579963	0.0227024133434851	0.161508663421138	0.140564678467358	0.888213853623713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.54150686329653	7.57680938481756
Merged-chr19-43669586-4	17.1334952060055	0	1.28384856100939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63815457-2	3.92570720330943	0	1.38260726275117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134196556-4	47.9303057089739	0	1.27649320715378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84802835-4	14.6112938537463	0	1.30405715728595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-50970115-4	13.9589284947357	0	1.2864082814765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-38637-1	21.0826164194205	0	1.28676034821195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92886395-4	27.8405445060471	0	1.27847208296148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115066613-1	8.83029198471968	0	1.31204169845386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29461410-4	32.2998072406204	0	1.28226062082784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167101896-4	13.0816650466239	0	1.28225434971146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146271315-2	8.10279016361039	0	1.31262119672113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4913195-4	55.8329655713825	0	1.27669836122146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65137912-4	14.8722147406916	0	1.28925372537554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26441618-4	12.9848716478772	0	1.30013089636271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38460126-1	3.09001985805974	0	1.36849910351425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52088562-4	29.4953045298933	0	1.28457476715481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73928210-4	15.5009134548478	0	1.27912154212837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143817707-4	32.2599688925333	0	1.28092172664398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136675162-4	17.8589318440053	0	1.28558074423232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65585582-4	25.1666621333225	0	1.28082169201609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75775398-4	18.3951080860314	0	1.28133175476552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-11985-5	540.328517898104	0	1.33527106131004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64680218-4	13.7353354545464	0	1.27852487764745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67116925-3	62.2027741018612	0	1.28158614427327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145860715-8	78.1481710306134	-0.650274984840838	0.192466683570793	-3.37863661791447	0.000728462271819292	0.0147866225102053	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37962147924184	5.74558914695398
Merged-chr8-70611404-2	8.88153139696575	2.34386119871049	0.86741260703228	2.70212950527622	0.00688969211725633	0.0831658129997467	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05532422693071	3.27581724657147
Merged-chr5-122400800-4	19.8805576930327	0	1.28326138154015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37451702-4	10.2215441227875	0	1.29475321543203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8589773-1	3.51034415625889	0.194884654465873	0.998782150366757	0.195122284067962	0.845297217692408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4214983094858	2.52099112156681
Merged-chr5-143475554-7	46.1882639116211	0	1.276309115157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6742286-4	29.8974688898821	0	1.27737071559387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23762796-4	21.1725466686437	0	1.27763557871652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75933632-8	91.7531791803714	0.430106697002401	0.192028737591901	2.23980380434756	0.0251036627970589	0.223573706273246	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.347227434103	6.78003813110328
Merged-chr3-122566740-4	21.4649368487683	0	1.2746410347813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39585648-1	2.86169210795137	0	1.41742612680676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33900358-4	30.1449023789265	0	1.28463796069684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3155987-1	8.35530827066552	0	1.34179489533925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121120315-4	37.4501687178993	0	1.27542952240231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36961004-4	21.883742254773	0	1.27609584280709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55488920-4	55.1950952427977	0	1.2771186543991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43667254-4	23.7336399057856	0	1.27981088151846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117393424-8	81.3822363773341	0.451966362055314	0.188044972885821	2.40350143436029	0.0162389033089475	0.159331437781755	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28480048508939	6.73447614052181
Merged-chr2-116972272-4	45.2186377963953	0	1.28447710831897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8836416-4	13.9180052572517	0	1.32941232142493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88708853-4	24.8957200297148	0	1.28605634186646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75436117-4	54.4741158160739	4.31627856790424	0.967815088556853	4.45981739584202	8.2029511797385e-06	0.0004322822966058	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.16613290694808
Merged-chrX-144234666-4	13.3713538316906	0	1.27921477706107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146170826-7	38.6801823019652	0	1.27509742406196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102948701-4	28.7388111457025	0	1.28180110526813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41951356-3	8.32718272430401	0	1.30489957630279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72904009-4	31.9582123611929	0	1.27395459584069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72763191-4	10.6712409342044	0	1.28323838918076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34189557-4	23.048502759939	0	1.28325885146714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37723530-3	16.5807813812484	0	1.28746199339448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58502139-4	61.0677633364516	0	1.28152456846481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53181674-2	5.63491179069033	0	1.39205339773523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-107178958-1	4.33849405565923	0	1.32518335814188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55389894-4	28.622883058242	0	1.27729386403989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9713648-4	13.9348361743439	0	1.28950751155463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40840633-4	27.7997413002062	0	1.2765120101172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121570281-1	2.2919315763256	0	1.49251019965166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94498244-4	21.1532085784872	0	1.28311557244564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24827383-4	15.0400791462503	0	1.28739483368519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49850522-4	16.3863846475588	0	1.28767609183721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117830598-4	24.2692740369035	0	1.28350379820219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152912425-4	28.9785996453152	0	1.28524134316583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65575739-8	44.7337755054029	0	1.2760852781098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84638780-1	3.47114377349833	0	1.34738774155456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64622490-4	44.4047529602413	0	1.27610742405524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11456514-4	58.0529499012568	0	1.28388025950085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4501837-4	16.1719616469525	0	1.28016326407016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29540516-4	17.5351691212977	0	1.28392299628283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88102908-4	28.6538666725006	0	1.28071821085842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20076821-4	13.9697061521161	0	1.2820821754825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74775648-1	1.58383557726153	1.25673473406306	1.47121054930375	0.85421813666155	0.392984135862928	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr15-67313902-1	1.76875253367859	0	1.58073253532648	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128479942-4	22.1914197630494	0	1.27822904252397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32194510-4	13.974091940855	0	1.28249898825118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108783746-4	33.1539557550631	3.10414954376711	1.06278917625282	2.92075758120883	0.00349181413562401	0.0496008463399585	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr10-37338457-4	79.0581744118914	0	1.28555183949897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117435583-8	85.0739482745854	0.339649521002571	0.155587152758893	2.18301778122332	0.029034500589518	0.249939201096383	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.53543923733496	6.85722704054461
Merged-chr1-144314668-4	22.751008043643	0	1.28224786535171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31356671-4	45.3876888905347	0	1.28130919516518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146777209-4	27.8128230122799	0	1.28299934379706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26559430-2	4.63944855347749	0	1.39362929292417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81221579-4	13.7611324514412	0	1.28881231925036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5936466-4	28.7846177896577	0	1.27694031489695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-42210221-1	4.97284427246571	1.58244315200933	0.815842773327803	1.939642298423	0.0524231765603531	0.383439097326263	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11631077077559	3.84369266306361
Merged-chr7-129575888-4	17.2231151179641	0	1.2862648057287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69095139-4	107.54860310804	0	1.28422297934165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23256146-4	75.6283258172101	0	1.28122192480699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32198769-2	4.54745118203166	0	1.79977071405157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87405756-4	52.9406639725308	1.2676159085511	1.00802346879037	1.25752618644111	0.20856316285699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.666688015277142
Merged-chr7-63911061-8	66.3689242141604	-0.0756257249324386	0.231558523157634	-0.326594434535049	0.743974653511749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34077987888961	6.24950657290007
Merged-chr7-43667456-1	9.21512257617023	0	1.30287327059706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5604398-4	30.8798876345002	0	1.27925986045207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106627425-4	84.4592786419533	0	1.27329980781228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64330604-4	25.3710065220072	0	1.28157540862679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23896779-4	37.5565778077335	0	1.27573518424085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65552454-4	37.0986770320727	0	1.27823071857433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55013092-4	27.3483517982628	0	1.27743452562983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14186773-4	33.3028469078616	0	1.27812498852674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13296610-4	33.4927485449304	0	1.28040779272881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90522079-4	20.3731652480249	0	1.29329286873639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165717895-4	22.584850340771	0	1.28793311746264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130797204-5	33.2650367048225	0	1.27993009445244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64305691-5	74.5391188240978	0	1.28044315559089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54870765-1	1.74096180137753	0	1.38056729922494	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59203135-4	12.2894316685004	0	1.28747368691017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17257007-2	18.1284659085527	-3.40322880371594	0.508418030817676	-6.69376103408964	2.17506503325564e-11	9.98790965232917e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38309141158353	2.31417261323036
Merged-chrUn_GL456389-10405-1	8.69568573137209	0	2.43325142346072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3160532-3	21.8779751327896	0	1.28898368818183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80533827-1	2.76819083542747	0	1.35872345088431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108340528-2	9.71126102042609	-0.39700510270452	0.411340599251935	-0.965149327410217	0.334470023189797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4780940094733	4.15924055935844
Merged-chr7-122206322-4	17.90484288636	0	1.28680815078488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55196567-4	29.9196339165721	0	1.28127887987902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10873759-4	14.0205377411126	0	1.29863392183242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3143337-2	10.2854012396507	0	1.31077570167407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117146289-4	13.0057783979999	0	1.28587849289182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52938438-4	43.3363207394212	0	1.28369664750935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46360073-4	16.6478183519234	0	1.28694058564933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-21959195-6	34.6617856302748	0	1.27541460906589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75179838-4	31.7588811516813	0	1.27860588171501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81665121-4	15.7066918893619	0	1.28538277463443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3389489-2	4.31994643256544	0	1.40483373324891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167093695-4	30.2771082400165	0	1.2842179029425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150557035-4	22.3529623311244	0	1.28033816340791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59145796-4	12.3092718513964	0	1.29075580616426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84107699-4	18.3353392037922	0	1.28847347033433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117625550-4	26.5452947218081	0	1.28697993865816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-13120-1	176.200768775666	0	1.40833888382259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63148758-2	5.23755289811751	0	1.35688245355215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58470672-2	2.58989429385611	0	1.52716622936325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34244930-4	27.2747502330756	0	1.28187336702615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-98038400-1	2.09308419477433	0	1.57957701892495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45299947-4	15.2806250706796	0	1.28588765553128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36037245-1	5.53862278659959	0	1.31275638227366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80948953-1	26.0634810411867	0	1.28452574885573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8584536-2	4.85125291217859	0	1.3426966924545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124492778-4	53.2978276757145	0	1.27778495858615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152402472-4	35.2128893509391	0	1.27649931031729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111035362-4	13.9569268305257	0	1.28656511977154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83550509-4	20.7602328599352	0	1.28702482749134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9885079-9	113.742446371245	0.706112770514766	0.183334297085238	3.85150395611177	0.000117394633266446	0.00359141840141815	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2115272917237	6.94011232078297
Merged-chr14-51942428-8	67.3158911504586	-0.0196071534046045	0.197456700818582	-0.0992984959402268	0.920901272582254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.33943061352792	6.30557033207284
Merged-chr14-45667307-8	83.0257369267278	0.815051611039318	0.251386083374345	3.24223043733731	0.00118598084405578	0.0216598949792256	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09300057902709	5.92515581922857
Merged-chr8-79163034-4	29.0974406914022	0	1.27632279255009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19216422-4	20.0875057578811	0	1.28356204003911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9556223-2	3.10986055189337	0	1.49484367129707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89632493-4	22.8555474467165	0	1.28325102270889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72351863-2	3.00520669876302	0	1.39074618600699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5845305-4	15.0867578930188	0	1.2876599947202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73433673-4	16.7406881318777	0	1.27873509300942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79087853-2	19.2444245576707	0	1.29628409024752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84762667-4	28.6320514480459	0	1.27894847514359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85003700-4	40.2610652224328	0	1.27924439421003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83732314-4	44.7057045850644	0	1.27538806366429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81074673-4	17.8940229745273	3.37469814227799	0.999057497252385	3.37788180516047	0.000730464700841835	0.0148100981511668	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.82166021832917
Merged-chr12-55474011-4	47.5408992068231	0	1.27437455547584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32931931-4	21.2291752454674	0	1.2797870033892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-141070085-4	45.0102783198469	0	1.28154227679196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45181935-4	15.3548699288526	0	1.30827874455697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100084432-4	45.5981117308223	0	1.28695836126771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67226205-4	22.3354086578512	0	1.27707844921924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180826804-4	17.698300755329	0	1.28432174375857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83834145-2	2.68152824101093	0	1.65057868847868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116955115-4	18.4340067031479	0	1.28688234989812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76287844-4	18.3913338578055	0	1.28116493208597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146592825-4	36.5988377817005	0	1.2829142422458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44355317-3	27.4243475470552	-1.87562088875972	0.386219762751102	-4.8563565867251	1.19565305007669e-06	9.29026685021542e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80331143417988	3.99841388502514
Merged-chr8-11103961-4	23.6086391846992	0	1.28434347759468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44476611-4	9.92969627013388	0	1.3262204610306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-121009306-4	23.7501163205132	0	1.28040852642434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127761157-3	55.8618719531038	-4.04641624573511	0.540244393392605	-7.48997360310319	6.88874672721495e-14	7.37954169896046e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.83999727245702	3.33390710713189
Merged-chr5-3300903-4	19.0782000367776	0	1.28286863224288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124709988-4	16.4507908672758	0	1.29831530688578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183669842-8	48.5166890880715	-0.500485750839404	0.254361374099586	-1.96761694896119	0.0491121280987905	0.366170533713649	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36133678341801	4.81444779952106
Merged-chr17-32252116-1	2.40628150958466	0	1.39688039308535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77804885-4	17.3245269767168	0	1.27634095882025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84656945-4	47.6908029239447	0.717954466909565	0.617830516385873	1.16205730838513	0.245212187128337	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97881370753541	2.17813337661218
Merged-chrUn_JH584304-40700-1	3.7245504153625	0	1.74983094170902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8539695-1	2.45105947029451	0	1.41622277842961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4266516-2	15.2394075847119	0	1.2853409712201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16589602-4	20.7226935050038	0	1.27588604357598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4804201-4	35.7090862998498	0	1.28368377568337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120453362-4	47.1361848794385	0	1.28091052182031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110602411-2	7.1005341022978	0	1.30883192183491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69179347-4	16.5538430947917	0	1.28833547668285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59544907-4	50.6209994760426	0	1.27451280750403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73681369-4	17.488793409779	0	1.28989727059642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46931401-4	20.8733354595241	0	1.27621126499087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86577382-4	58.7782507622909	0	1.27893487268775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164521915-4	22.1840071501697	-2.67919003503754	0.529832800801845	-5.05667076666993	4.26638844020109e-07	4.10591191477733e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56563395147571	1.94283950978213
Merged-chr15-99342805-4	17.0376152969261	0	1.31023163389042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121548293-6	45.9486593317054	0	1.27874794331373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3232758-2	8.16969728572771	0	1.33742543881379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11455922-4	23.5968751306232	0	1.28011878401905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54306194-4	31.2113516026081	0	1.29217265148212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31423293-4	29.5934864256016	0	1.27676507930534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60738273-5	27.1806860314092	0	1.28188314611076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136465599-2	3.77010521196393	0	1.35057763579322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63828965-4	20.8708493651947	0	1.27683982575262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47295433-4	32.4563772894731	0	1.27604119914228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138144617-1	1.83258841842096	0	1.5754359219874	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143020949-3	17.3864667333127	0	1.28882787699288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122895670-2	7.02036446570143	0	1.38019041880098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84184170-4	13.9981000459811	0	1.29137580649158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21180058-4	21.3473435561793	0	1.29056450814213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48672045-1	4.20830998401323	-0.784304212483892	1.30948622317346	-0.598940407775484	0.549212624285897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	0.469435083901436
Merged-chr12-26440508-1	2.91227568797847	-1.22200084189262	1.13079027116283	-1.08066090861924	0.27984797797661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21924315209021	1.58492111464609
Merged-chr15-36705574-2	5.0295146929869	0	1.39298128152163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89848798-4	47.3107601757388	0	1.27628557424431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53529619-4	30.0348507515267	0	1.27494698324088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127225241-4	16.9127507754825	0	1.28090377970197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65739848-2	15.8527174866599	0	1.28481015799615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117108286-4	35.9654121757363	0	1.27501451479337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-44048474-2	10.5021361486282	0	1.30439774009397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70562058-5	52.1449881901635	-3.21392251846479	0.312904006928252	-10.2712731294672	9.49433354157186e-25	3.10208359803777e-20	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.90917281227039	3.76935026701606
Merged-chr10-86171389-1	2.48144468372364	0	2.26900431898756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53155683-4	93.1677772496301	0	1.27901537438377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62541734-4	24.4751647839148	0	1.27798111178635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130800301-4	60.0948116290041	0	1.27992435637359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66235289-2	5.14651971329937	0	1.36228100604355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133918581-1	1.43966259224001	0	1.67588267480728	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136531815-2	3.9595289253237	0	1.41996533861319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114168371-3	16.4334680093301	0	1.29751729840517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132221776-4	28.7178525058688	0	1.27501541648205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91869806-4	66.0384599275473	0	1.27879057362594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11016722-4	24.9643135042657	0	1.28087558029966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52822384-4	15.7250099673591	0	1.28660820373655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69448096-8	69.2711266211637	-0.0416169307178255	0.205839904903197	-0.202181062692374	0.839775177198472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88883117732725	5.86881820235627
Merged-chr4-122955537-4	16.3305559354279	0	1.2803707577567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-56903220-4	21.295961668053	0	1.2838256825791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79120309-4	12.1882552249892	0	1.28931014977398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47063938-8	110.141526186897	-0.313908909155241	0.161975479211607	-1.9380026574587	0.052622898326473	0.384641601123233	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.94130128303101	6.62478716755239
Merged-chr8-126839751-4	54.3109882444862	0	1.27878930620259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70195503-4	16.4705605769919	0	1.2827429090596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-108954528-2	4.20516471511337	0	1.33420732759669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158133267-4	80.0069630468984	0	1.28036656191211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79813003-4	14.1425744165862	0	1.29170363852757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30945174-4	17.7756630699078	0	1.27950773366385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24284370-8	63.7562070182863	-0.789788891244197	0.209211678033574	-3.77507077361834	0.000159962241157801	0.0045926593192872	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.4919550545403	5.66185053184544
Merged-chr13-3526478-4	23.0325469444911	0	1.28305353977868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85348517-4	30.6796247877794	0	1.28153378207213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165644577-4	19.4306853045232	0	1.28240863246559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7595384-4	36.2211866280367	0	1.27667319092876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48274831-4	14.5891965972975	0	1.29390346112986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91865166-2	11.1085051156861	0	1.30419802926804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100344510-4	28.9187050941058	0	1.28523048562105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76366056-4	16.1739446489144	0	1.28034436340132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159735682-4	21.1371967405724	0	1.28354337208366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5730845-4	48.2994778682506	0	1.27665591146952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-19857810-4	39.0288723775645	-0.869262736083089	0.788800875827697	-1.10200528767284	0.270459372823787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20872587682032	0.963545719069792
Merged-chr1-43474759-4	32.2701448812076	0	1.28218048041186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108296594-2	3.26723320408186	0.103672471119646	1.38424780594003	0.0748944449648184	0.940298696421354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr10-51451747-4	12.1278400168443	0	1.2894777369977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128382595-2	3.90921660937133	0	2.05918978012601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116932481-4	33.8469084744467	0	1.27710976987837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68378332-4	37.4772480894637	0	1.27901902845693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52891275-4	27.6439855851808	0	1.29607190728471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18600396-1	3.03887853088713	0	1.36995627461885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-98663845-3	22.3169644285889	0	1.30743905611061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32352800-4	32.9514891254328	0	1.27719356435575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114226776-3	19.305875074213	0	1.28551416275449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17005057-4	47.9898917465361	0	1.28505850780332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45276043-1	2.16171753549023	0	1.48479989726771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17907036-8	91.3727957500651	-1.08122488815436	0.247546867889461	-4.36775830521585	1.25528294394656e-05	0.000604924183297431	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.1672482642432	6.093572094156
Merged-chr2-34780679-2	13.0217748843101	0	1.58115185799176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91585412-4	13.5590426793543	0	1.28222764300565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100100865-4	18.5589192804402	0	1.27806620461936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57819136-2	5.55428988468556	0	1.66350167273169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-81742732-4	15.304736695306	0	1.28913109084235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33175049-1	6.48858474287991	0.820858021622142	0.842860631229589	0.973895316980995	0.330108519198762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62798331952018	1.5268023559189
Merged-chr11-23067827-8	76.1663089225208	-0.215914280078173	0.173672536441936	-1.24322638743955	0.213784421539441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47365214066694	6.27659382726917
Merged-chr16-58509745-4	26.2608919098498	0	1.28015742901874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123928249-4	31.1292600131471	0	1.27569218286836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55808008-1	3.73825291029272	0.84816460983584	0.890104543024219	0.952882014234099	0.340649853882873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59812047819053	2.09093093088911
Merged-chr10-25366888-4	50.276134937179	0	1.27876226138143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-139485144-4	13.3121215931407	0	1.2959777704921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110166381-4	29.1174363973693	0	1.29235670212039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80177768-2	10.0656504005985	0	1.28543422535106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122769446-4	28.2831571602969	0	1.27906946113088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34044899-2	2.2923417433589	0	1.67346529526952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39801318-4	23.6405243287848	0	1.28013559906517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49971476-4	34.1074552623305	0	1.28171298865012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-7980836-4	26.7905278661475	0	1.28061703184994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76471330-1	1.99188958546664	0	1.68284839157485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42103115-4	13.2480272113304	0	1.27967834232243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59219531-4	14.9941777170677	0	1.30158753904533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88110006-2	5.00757491417359	0	1.37169529012775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3176688-3	21.6791520681333	0	1.28827600036633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67272543-4	16.9644686948866	0	1.2826554182278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148585918-4	10.9206803575051	0	1.28615476115766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62715222-2	5.55435708577557	0	1.41698480792814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38473866-4	36.0782163217333	0	1.27850085210157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26864251-4	28.9262421540131	0	1.27989730086502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61278090-2	2.70521443685167	0	1.41778436053541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49818745-4	18.744865726094	0	1.28316704003584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96691093-4	51.3509872264497	0	1.28869720176129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25634596-4	15.9052687031298	0	1.28200159230174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53122048-4	53.5846082201667	0	1.28046124338531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87985035-4	32.3380026576222	0	1.28405359430647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59816330-4	15.4131058453838	0	1.29418915748263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75057025-4	39.2715449172076	0	1.28057970092232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71669722-4	14.8807974038962	0	1.2797629105937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81643707-4	39.471665523226	0	1.28175467990637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62297973-2	4.10540910675107	0	1.34410073165391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35942337-4	35.321370480909	0	1.27773573361141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37788902-4	25.8492741683165	-0.106652817553258	0.300060325801677	-0.355437918252978	0.722261546282575	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03868713313292	5.94387520372174
Merged-chr10-44589494-4	47.6936994498658	0	1.27756120867977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-10253267-4	24.9009555240336	0	1.28459393669344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57198460-4	17.5513441069101	0	1.28582276902885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3447656-8	50.1866739415957	0.1579994869791	0.228011405630555	0.692945541659024	0.488343728032136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76309076553171	5.8883692999587
Merged-chr14-17414529-7	45.9440306988556	0	1.27603863795624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34845054-3	22.3273680431486	-3.77202636323578	0.549990837340895	-6.85834400709807	6.96633439575053e-12	3.67114586632834e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87370751176217	1.54311005189624
Merged-chr2-152810384-4	26.357322182091	0	1.27686789378314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-87171676-4	28.65855895701	0	1.2810824491934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76553214-4	29.4711666694431	0	1.27729731032415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167271297-4	19.2553900537996	0	1.27615483226935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93988096-4	42.6456386466778	0	1.27295333186415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139248237-1	3.12572585227876	0	1.41104461430519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91710714-2	7.84759231708108	0	1.30104517898128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60252773-4	44.1970516517274	0	1.27468566330218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37537504-4	29.5424901776941	4.20304104200153	0.971018687987948	4.32848625262884	1.50137702514965e-05	0.000700778450610207	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.73515138435419
Merged-chr10-67009965-2	6.8068160724897	0	1.29675398300198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70468111-4	35.8319072245303	0	1.28708597486895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43819284-2	3.99746011980045	0	1.4990742044821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91303114-2	11.1088120006797	0	1.3161431026372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75887358-4	28.4311345842466	0	1.28046568144193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24311879-4	27.8636339098721	0	1.27784396319216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59241499-2	9.28411056825393	0	1.35810196948864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97673028-4	20.5023071838699	0	1.27756051479337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59575746-4	17.994542058817	0	1.28580883333921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126829963-6	71.2782792168619	-1.46993385657901	0.210214363976075	-6.99254717316231	2.69939702599477e-12	1.56101591204119e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.50561784589276	6.03398067994252
Merged-chr5-92375540-8	58.7939508212213	-0.331111954699643	0.247253468423708	-1.33915999969809	0.180518591241944	0.946419116118108	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34792006618543	6.02543046428909
Merged-chr6-31453697-1	2.58971083355307	0	1.44174102443978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62324571-2	3.45982912616728	0	1.41166835798668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85670291-4	14.5010631401833	0	1.28555954492795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99382500-1	6.41099085726384	2.45222145184717	0.612048062082533	4.0065831488843	6.1603444896202e-05	0.00215877225413477	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50458993008773	3.81778603915042
Merged-chr18-23812895-4	22.6628205277915	0	1.28794636622599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101332607-4	45.3220091575627	0	1.28112760709533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101515679-1	1.84775420170586	0	1.45369198118528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155051056-10	77.3617898649266	-0.681748053162493	0.292525191659554	-2.33056185450149	0.0197764748693587	0.185727287796371	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.94307302589704	6.08999904911317
Merged-chr9-119352237-4	10.8457683888518	0	1.29043172586016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115847224-3	13.2650195913259	0	1.2919607483231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20843117-1	6.05323445729797	0	1.30488512758814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40594979-4	18.2368590141902	0	1.28037481553439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119738824-4	11.3792541708055	0	1.28676170600942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19501860-4	20.3766981583608	0	1.28062092321358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-11226-3	361.352300583811	0	1.33962381587277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6392004-1	2.97931324156813	0	1.35285911610728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-7955747-4	19.6446689417899	0	1.27947289777825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76929333-4	12.9079354719458	0	1.28261092014693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30059498-4	17.5925311963749	3.79348620945999	1.00957942509193	3.75749160014286	0.000171625126128468	0.0048488793245751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.89306236960967
Merged-chr2-170202183-4	14.1054216567255	0	1.2845432150473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30040075-4	20.3460320495982	0	1.29327901119445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19095736-1	2.06939462743218	0	1.52086775661472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16637861-4	43.5114200428617	0	1.27561383763142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20845904-4	13.9513342446234	0	1.28583201506608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28217791-4	9.73469221249039	0	1.28359287209237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40626720-4	32.9094726136649	0	1.2771623404045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77266431-4	78.784919255507	0	1.2820498416193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96898345-4	21.3983479683603	0	1.28250890243335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11770138-1	1.93756160358127	0	1.44962086283599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121636389-2	7.88651186082633	0	1.33398319347042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55504950-4	28.4213625486278	0	1.2781520388448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143579941-4	38.944238207778	0	1.27771256103749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3904122-4	20.1728030117774	0	1.28217942491487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73731073-4	16.4485852226703	0	1.28809274528379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101277345-1	2.87804210808938	0	2.02262909399195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75273751-4	14.6818930374985	0	1.29466691451074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32268141-4	19.9914356994116	0	1.28753804934693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-20921214-2	14.5497963669589	0	1.27993557242409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7714289-1	5.05787921443127	0	1.32767445098165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166420494-4	26.9853888413059	0	1.28408144815995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53227946-4	62.3697171520805	0	1.27499554556312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53430278-2	3.32951266962974	0	1.55184966456941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165667111-4	37.6151883839181	0	1.28900915767898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31736328-8	89.2819760344047	-0.108569113476516	0.233230012322763	-0.465502327060162	0.641571770842525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9448960740916	5.82785087362449
Merged-chr9-61032257-4	14.6600209811192	0	1.29985726565145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45584247-4	23.053792796284	0	1.27843298282964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43877625-4	28.3563023264096	0	1.27581627067685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66468031-4	52.672948583245	0	1.27487857069238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101656285-8	153.968730826896	0.654034790464598	0.155936849925178	4.19422856610491	2.73801793747484e-05	0.00112811172851344	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.22560970213508	7.88276570095042
Merged-chr2-167926233-4	24.95046894441	0	1.27712628444348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35394292-8	112.398085151299	-0.428752492472238	0.164972844482782	-2.59892768301626	0.00935154718507118	0.105323371657301	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.39843524582325	6.94046442313051
Merged-chr11-90241002-5	34.9068530567844	0	1.277181474763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25012947-4	14.7481608089501	0	1.28125964252804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117299858-3	36.7109354647078	0	1.28731261760836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26440009-2	24.4971841209375	-4.14107749173883	0.98229381985508	-4.21572182175571	2.48980520126999e-05	0.00104696789370778	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08374936216618	0.469435083901436
Merged-chr6-32479894-4	16.1629000550255	0	1.2854494196509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82225993-4	85.3536121828644	0	1.2776702716505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133688727-1	3.41730847697947	0	1.38333807389067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21735945-1	4.21162445273399	0	1.34150675526759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34036518-4	30.207522915871	0	1.2819692885993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67026081-2	13.2275725800035	0	1.28726849887404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109914409-4	54.1303981153959	0	1.27760756527981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19163176-4	16.7901021009121	0	1.27901227346214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31116594-4	47.9050856805936	0	1.27880738964231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101543677-4	16.1396003887438	0	1.28228965909328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10824774-4	13.8590351702261	0	1.29118340614887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23874803-4	18.9475576528276	0	1.29730157323293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35166037-4	20.722066651613	0	1.27886530825266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8823827-4	24.4711971759945	0	1.28434052770779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-89177329-4	14.3643932315243	0	1.2798408656312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58560410-4	16.3615237054193	0	1.28889063850614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4260733-4	19.1161001733089	0	1.28542415853385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116020178-2	10.6370301698214	0	1.29325572151871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120256716-2	2.15009089419345	0	1.58016435107933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34640919-4	17.9711277264595	0	1.28458309581381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106971254-2	3.48060627507999	0	1.32990354686933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59538551-4	39.8304761902114	0	1.27966548188492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160234780-1	6.2627803499035	2.42825500806815	0.654989992201269	3.70731619869084	0.000209467340892422	0.0056748975364661	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41523286930624	3.79543538924771
Merged-chr11-21082899-4	35.1440290872316	0	1.2867013849598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4505503-4	27.3459898112052	0	1.28147772613795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53325776-4	14.3379786513431	0	1.28762832198789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25295925-1	5.04477363077191	-1.02109865617193	0.887159447287881	-1.15097535092876	0.24974237628729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8151780384746	1.47158896970822
Merged-chr5-67822262-4	45.1471972390791	0	1.27872676608211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10383629-3	35.6272065711039	0	1.27997844581882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-85924551-1	2.53881266463058	0	1.36226450831384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88490463-4	28.5542703757442	0	1.28073991825791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31113745-4	33.5129970536493	0	1.28201629259028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146806038-4	34.3256221880066	0	1.27922868546499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80294893-4	18.4576545287463	0	1.2980421902311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32542942-4	41.469701129213	0	1.27729722578181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140594049-4	13.3020474262429	0	1.28170485546611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70720804-4	64.6863513895985	0	1.27993393680771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5238936-6	34.2816062065004	0	1.27535995994549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33892191-3	11.1724275933203	0	1.29234291842099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37431513-4	31.037649712812	0	1.29089762503736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114926989-8	164.994246615257	-0.722440257664455	0.158797294363212	-4.54944941323774	5.3786461807511e-06	0.000306695474107645	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.24884358121346	7.52027343228181
Merged-chr4-32251233-8	117.372004326531	-0.0739751079074957	0.176172310800135	-0.419902012816415	0.67455703729049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.84873910808938	6.7889229820959
Merged-chr1-34140222-2	4.26040672476118	0	1.41812806770823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90301080-4	19.6527602821731	0	1.27819735087495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50445213-4	15.8965654357015	0	1.28315830060057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62635134-1	1.6989638575884	0	1.4630446843407	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-16007873-2	4.21716796833396	0	1.53889427896771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8132982-4	32.5144126626334	0	1.2767921108314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84437013-1	6.65848451334913	1.10669245764625	0.656152772608916	1.68663839252854	0.0916729049156923	0.580526954610023	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94882013329665	3.57897499507585
Merged-chr17-48287046-4	16.9595111707904	0	1.28137061714108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30579279-8	78.8503849309199	0.561693861703972	0.183539068058421	3.06035040738675	0.00221078169841484	0.0349711306861816	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2382340432863	6.78946365447866
Merged-chr8-39981510-1	4.34477958081806	-0.32140080699176	0.895487869747344	-0.358911402208543	0.719661369458789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43662088002277	2.02032251225296
Merged-chr3-87508438-8	54.3484961505984	0.559928099557606	0.245586118776006	2.27996640179938	0.0226096812348125	0.206348076811461	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70032982895801	6.30686235734825
Merged-chr5-123694667-4	29.7770297076628	0	1.2804201239864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77072539-1	2.46484239308443	0	1.64086489466068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113450121-4	38.0264884423379	0	1.2755107492497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47680509-4	13.5412506492521	0	1.28845988619774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121996992-4	28.9078511186816	0	1.2838786321855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85084355-4	23.0913567703069	1.80210363386751	0.515057019196363	3.49884297602488	0.000467281681670672	0.0104751247926078	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62756742637657	3.56546887668083
Merged-chr3-149088683-4	20.679385078686	0	1.29665406595324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84701599-1	1.99332810875672	0	1.39848851939068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70942804-4	31.7931204714939	0	1.28935472082188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136941180-1	3.61343634872976	0	1.32622931180788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66410672-4	13.8329588889545	0	1.28371784911449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19627213-4	35.4271352447198	0	1.27507453189763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107012790-4	20.6488979614085	0	1.29270428023345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70966227-4	24.6779099668737	0	1.28322606314936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42328740-4	47.519770161449	0	1.28272343711257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-47976773-4	47.4243020202511	0	1.27593322639912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33282561-4	35.6365782008187	0	1.2826420847316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54956077-4	41.8565795114132	0	1.28457324085896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81983293-4	14.3194969531046	0	1.2829774612846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66998952-4	34.5555448303727	0	1.27581108878142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101538316-8	78.3068408559765	-0.777699371748781	0.23099719806388	-3.36670478372519	0.000760720773016767	0.0153426109980104	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.48733614706123	5.68462343479148
Merged-chr1-156437495-8	77.7990844993274	0.836450770205696	0.198972051703987	4.20386060777065	2.62400568758503e-05	0.00108937913380515	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55480350273174	6.3779323158674
Merged-chr4-53414182-4	28.3298900328861	0	1.28084017317828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152807769-4	36.3800560251568	0	1.28163821921843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95685333-4	19.7518667573162	0	1.28014313591486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50096666-4	52.1657951216776	0	1.27917648980006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24571824-2	3.53999522776381	0	1.38943654130881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95913280-1	2.91753559836776	1.1626425297624	1.92268122436768	0.604698540261017	0.545379318242985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-68430812-4	28.3615178962313	0	1.28952730823827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66849903-2	6.30337427519834	0	1.37173341202399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19942387-4	24.3260895815655	0	1.28198879104863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32548135-4	16.273951844019	0	1.29153297012593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71037684-4	15.4649531251504	0	1.2824874886405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102877691-4	16.5080822092664	0	1.27972308910358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83727844-4	15.1469242441755	0	1.28315694494034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45497760-4	19.096935611382	0	1.29340520757838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7335840-2	9.52757861478914	0	1.40018198267538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106760186-4	18.4926742524146	3.91157623373219	0.702189588564216	5.57054148542744	2.53948837726706e-08	3.96998582538022e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	4.11191744815634
Merged-chr15-27883045-4	20.3521242982484	0	1.27687724609429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152525126-4	20.7564536684465	0	1.27961372501344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83733282-4	16.3506548514055	0	1.28225742060664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39222748-4	26.5870980098862	0	1.28224152112739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25128693-4	37.381055446304	0	1.28862567970768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110706934-4	47.9370025144438	0	1.27966857341275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63895398-4	25.573810215793	0	1.28090615014386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102368191-4	27.5404251638099	0	1.27719094218282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66440148-4	13.2182070793037	0	1.28350682419737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27436776-2	4.60585403770596	0	1.38928174136735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39007372-4	19.4006468654182	0	1.27998020285005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24865014-1	3.414867931926	0	1.3589569568548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8305907-1	2.15762629061468	0	1.43394390445843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115414293-4	17.0683086190102	0	1.2816816597632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135729874-1	2.90578321595681	0	1.41743262849276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6827415-4	29.2575590086414	0	1.28037453217727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122848199-4	37.8712403253112	0	1.27808305501826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79642920-4	17.1727533371193	0	1.27932068396529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51013244-4	10.8748186964596	0	1.29254379205214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-103941074-4	12.2858580919112	0	1.28506009228682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84402018-4	27.0841892102634	0	1.27640251153202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80774406-4	22.3767536324365	0	1.27935925741718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126746300-4	28.8703953481407	0	1.28246458893291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109011861-4	56.5892580390881	0	1.32767867885192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80319356-4	13.6985649975567	0	1.28737200299067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43790765-4	53.1237770838143	0	1.27954530909723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171957538-4	16.0895734370272	0	1.28160356462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93231237-4	25.0365420905236	0	1.2773987892869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123397549-4	20.6685665535356	0	1.27765478680754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106387034-1	4.09105677701804	0	1.35338114088436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34691242-4	33.6372947591627	0	1.28308815493879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52993434-4	18.4541726900823	0	1.27917362585734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31172951-4	30.6329587128145	0	1.27995235287081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55386968-2	7.44482669941896	0	1.30308815051959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35995375-4	29.9428932306088	0	1.27457095219263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53451036-1	3.59824865015443	0	1.39786464389125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97824169-4	31.0318327388665	0	1.28616408628369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104334050-4	45.7680662986616	0	1.27463117807732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21081790-1	2.09590927037828	0	1.46519216108708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147060201-5	45.9486814219547	0.522931554604871	0.231148847785467	2.26231521210182	0.0236779352230827	0.21356222982575	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47768076779113	6.99087230459533
Merged-chr3-96300832-4	42.3248781259671	0	1.27510193787078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69260331-2	2.69200170195828	0	1.90026607531717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127604695-8	150.917246674229	0.485808239286981	0.193378169171418	2.51221863030641	0.0119974735284486	0.127331847043447	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67878577787554	7.15793320210508
Merged-chr10-57690377-4	12.8056955995955	0	1.29024790047615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35165446-4	27.9576896541603	0	1.27519667115123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78624206-4	29.7582147647279	0	1.27865760483507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145241023-6	77.3376229828426	0	1.27552227940211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31931896-4	15.9809350032508	0	1.27899137954133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120166036-4	15.8288222580785	0	1.2913455738478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129925002-8	78.5246013209778	0.609798777350014	0.170699618967517	3.5723499621054	0.000353792186120533	0.00846536220953218	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56933031529646	7.17873669177246
Merged-chr18-54860828-2	6.33316048665547	0	1.32316026856312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-6624148-1	2.26902312493521	0	1.48600500452042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102094391-1	5.59669017993959	0	1.33045275154419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110381724-1	2.81607702799941	0	1.39654400686301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45643695-4	27.7930633576495	0	1.285853427431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99464478-4	15.3384093325375	0	1.28204098620806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27618010-4	37.5293165247059	0	1.27618173515102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101742181-8	119.829005061785	0.0860791098468033	0.140594692564439	0.612250066319896	0.540372321254108	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.18865886984979	7.26749937485996
Merged-chr5-144283804-4	39.0977764418646	0	1.27636085565035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105377209-4	20.301168989837	0	1.2822355855561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97361163-4	27.5105885020279	0	1.2776822573792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96130891-4	24.3164965091576	0	1.27631931171303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86380629-2	5.36263839998906	0	1.47471634366379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101645581-4	9.52190443306158	0	1.29378660404062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63702003-4	36.3626542364278	0	1.27870120561102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124014950-4	32.653583583227	0	1.27546733851278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5103967-4	27.4391439116581	0	1.27903681077454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46932976-1	2.92096920384916	0	2.08679489680016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125105530-2	13.5080973445741	-1.88251612827058	0.849420130443778	-2.21623677235795	0.0266752906984791	0.233913519321365	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65984776875555	1.08186277552917
Merged-chr8-56299599-4	23.2130938443168	0	1.27717947103991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40148530-4	35.6995745407051	0	1.28377973736088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184535781-4	26.9745223809723	0	1.27910311022283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32434303-4	15.5864554643608	0	1.29143428985913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118180444-4	12.7464180448629	0	1.28595952681668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112864996-4	35.7608111637049	0	1.28737067158677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102034336-4	21.3268993303106	0	1.27995019878907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138040752-1	3.34658796298086	0.249646667999427	1.17389494217635	0.212665255662992	0.831588068784683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14515290409974	1.50921536809972
Merged-chr3-95457925-4	13.1930545129731	2.85816750857577	1.05093730728149	2.7196365461315	0.00653537059764961	0.080003807994382	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.961728545204858
Merged-chr7-63903856-4	14.2622591184393	0	1.28193232404025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49970578-5	32.3259166870996	0	1.27640650595888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75960012-2	2.80849820292834	0	1.45466399515213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37595361-8	60.8021295064629	0.639243150697344	0.256639389182221	2.49082244442012	0.0127447792648123	0.13310218089155	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83181900729779	6.36557636770033
Merged-chr7-110109280-4	40.4375865094507	0	1.27877820631585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13553807-2	2.71486265265735	0	1.47251176699486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140999476-4	34.7781236734621	0	1.27606367553578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73535028-1	1.91244310017682	0	1.48090133714049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53140499-4	42.4905180744185	0	1.27667035223131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42527106-4	35.3980013070348	0	1.28054728908364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113304787-1	1.98180775098278	0	1.43022736990636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142088998-4	21.2407841792884	0	1.27878053226955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34010398-4	23.7226230333371	0	1.28728795542657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61172904-4	57.8275217147553	0	1.27938378650754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130922131-4	13.9405571632973	0	1.28690179562189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148808176-2	5.03633101222455	0	1.36490315259667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87961032-4	16.2759366459995	0	1.28165613781136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50737772-4	20.9178400391416	0	1.28185140540743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85489431-4	23.1266340857869	0	1.27885619962317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66237839-1	1.726286442305	0	1.49564869810194	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111438107-3	17.1355566996252	0	1.28253390668015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28591680-4	64.139086352679	0	1.28346261413818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54724353-4	16.2741697590898	0	1.2837314677642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17433323-2	3.62061476987643	0	1.36613936198119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31838284-7	45.9597170772958	0	1.2781443010858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46849979-4	17.8263064570197	0	1.28122531522024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74930513-4	14.7808179108074	0.715585127266776	0.817219201063292	0.87563425618943	0.38122889633948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.923126407841983	1.26501898168246
Merged-chr2-167742700-4	27.6639258342824	0	1.28323527241329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111178707-4	24.8972210404407	0	1.27713277238441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53386422-4	10.7220384291394	0	1.29438136014309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31115093-4	26.7420610562032	0	1.28567496740139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16183237-4	27.0111228359231	0	1.27533991125557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166018955-4	9.40668115552493	0	1.29545801277352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49885484-2	3.75148598879363	0	1.33411868438496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32475195-4	29.8432076719944	0	1.28107027899816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94382216-4	25.8534359821368	0	1.27719731824639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129400526-2	7.44804616552436	0	1.29293411363366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43665119-4	23.1629836881147	0	1.29077355056208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130919410-4	23.9568032610361	0	1.28143052756231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142920922-4	51.7440575526877	0	1.27697338437803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12315427-1	2.26472672181815	0	1.39979267368598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51129834-4	15.003348596964	0	1.28240961880021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91839627-4	28.7823039956427	0	1.28083788950238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52198173-4	27.328051356525	0	1.27621279291106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55866023-4	15.1281543735499	0	1.27837301038541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36930977-4	28.0974856217441	0	1.28392688875061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6389089-4	54.0436504080103	0	1.28126074965733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33076354-1	2.16130010878277	0	1.4501510414888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59072081-4	18.5196646508677	0	1.28893562331777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52903769-2	5.26259688655551	0	1.38416867379705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-119921238-4	13.2084508016055	0	1.27995710941182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-22420811-2	3.48883733574297	0	1.37018519320025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67600132-4	12.7418724613892	0	1.28923908468908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38565096-4	16.2434323739655	0	1.28202409555026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30186687-2	4.52017291569041	0	1.36741966289762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39969243-4	15.0325887698385	0	1.28179754904555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154260626-1	2.33850776061751	0	1.4167321813381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54853216-4	14.3630454634156	0	1.28608392355288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84059441-4	30.4057363223561	0	1.27872753888509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75427705-1	1.8843465645871	0	1.48604548667572	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66144058-4	14.5152380396496	0	1.28330478760773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31123076-4	18.7202572714715	0	1.27989925979505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57037319-4	28.1941745476741	0	1.28080208868764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73973730-4	10.4353364006331	0	1.28199232312808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68657135-4	15.0986062105253	0	1.28123058450924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95428390-4	12.9192085573311	0	1.28139469024364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66813580-4	16.1595968535675	0	1.28391517466926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114694150-4	18.8277259899754	0	1.28570323595131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47275180-4	25.2628152468111	0	1.28715929606414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80939423-4	30.0264816278579	0	1.28601041208575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43913419-4	14.6847978131012	0	1.28048986226278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76099845-1	2.18100079819866	0	1.47388375058626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140614231-1	2.34480836562471	0	1.43641702547298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13983870-4	38.5144194068221	0	1.28338242806924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131269852-8	68.2669858375299	0.623261908299557	0.213769732245997	2.91557603478838	0.00355032585836142	0.0502054952478869	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31615150642482	5.8977570770102
Merged-chr17-83395591-4	11.5184059138378	0	1.29211970021846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27209936-4	70.36220118015	0	1.28015492867589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118557101-2	7.63911704307228	0	1.309580161911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101155102-2	13.6480159821226	0	1.33829213000836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180768577-4	17.8477238000597	0	1.28173748822915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43872057-8	65.347069452363	-0.195317660790564	0.216270155147225	-0.903118882296094	0.366462803542639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34135721192647	6.1387079814771
Merged-chr11-52046968-4	10.6589622363932	0	1.28357359319348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91611399-4	34.3141013902525	0	1.28050840559044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113973259-1	2.04736091064117	0	1.43052717898085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145929785-4	11.1939754562389	0	1.28246301480778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99443644-4	19.0888914781617	0	1.28936723859453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60865339-4	12.101180411208	0	1.28463886495314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75466930-1	2.81569426760468	0	1.53856110022606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21078690-2	11.8357069505684	0	1.36814828279724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-98018332-4	34.3295839539057	0	1.27670653523945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-63112-1	6.38074565021184	0	2.43325175099526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117305563-4	10.5899200208218	0	1.28558099178038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114843043-4	15.2212215207032	0	1.28573959304223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56774545-4	33.3095506429778	0	1.28734937746187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71500031-3	32.8579823794575	0	1.27895452198693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34619683-8	44.9160099507486	0.596431070552001	0.229823699282624	2.59516782826885	0.00945447409388481	0.106189766954107	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15834342310241	5.67483831605563
Merged-chrUn_JH584304-28841-1	2.76856801191052	0	2.43325247705945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5367683-8	88.982827207238	-0.20523553372926	0.161120142862361	-1.27380431821355	0.202732774421137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.90409891141343	6.71333947211285
Merged-chr18-24246122-5	65.6933529553645	0	1.27454104306285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91703494-4	18.8014467590798	0	1.28927948248177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-148903326-4	33.6065791056433	0	1.2814295451234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65113002-4	37.4900850396891	0	1.279515661379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89455554-1	2.09790310215648	0	1.40173356114461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65514059-2	3.00856744344976	0	1.46060765248411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86399530-4	16.0840277770383	0	1.29160671824656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86466094-4	10.0264752801136	0	1.30010596297023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108994779-4	23.2575827535333	0	1.28556893740786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143161813-2	17.802806408793	0	1.28809668606086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119425815-4	29.7154908414735	0	1.27646090326777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65090578-4	32.3828845774533	0	1.28108084295395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107553965-2	4.74513769815962	0	1.4685865681073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16202934-1	7.97734122960508	-0.558926853073826	0.665447422338289	-0.839926392846838	0.400949658416415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96828251681866	2.15258675016244
Merged-chr2-167752997-4	23.1437549917972	0	1.28674274655643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103606798-2	4.33721409811873	0	1.34519351527541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41408569-4	34.9110030155362	0	1.27929305938419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105864314-2	5.34992450477513	0	1.46699554141894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14867185-4	12.9165543123789	0	1.28642124688714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86598729-2	3.70820774630948	0	1.51155420120884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121877760-1	2.472498769386	0	1.39322374085719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65545806-4	53.8341741138096	0	1.27852371000204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44053609-4	36.2900011562832	0	1.27712201907655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118465146-4	14.8990458704835	0	1.29441989414597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41612414-4	78.4067670303625	0	1.28153127165739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172402645-1	1.73112867243897	0	1.53219957745899	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12294296-4	16.4659028766089	0	1.28445595902445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101548967-4	28.1841567082123	0	1.27818312813893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84114138-4	10.9430490451534	0	1.28737003831526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121330248-2	10.6027254842008	0	1.3160436316134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55142081-4	15.1517591772199	0	1.28931269280538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25193628-4	18.0528314395388	0	1.27788546430934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-139550657-4	9.81932578298593	0	1.28501980040349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42374186-1	4.78372580940348	0	1.41448670706299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-121024123-4	22.3952462606055	0	1.28201301578306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39762194-4	19.6175444679577	0	1.28668035911788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90745555-4	23.3540476620392	-3.32113523476493	0.530472293248704	-6.2607138526043	3.83219146627104e-10	1.128010736734e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04505681362682	2.42775089836225
Merged-chr6-17737448-1	2.2597241163814	0	1.45807181311572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137991356-4	11.9202847632854	0	1.28590231312686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52523361-6	47.6148034583188	0	1.27576969388819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126412775-4	18.1919225464279	0	1.28882934820328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31109301-4	16.9379602859288	0	1.2837617463855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66877975-2	2.9142882349994	-0.445152480733736	1.58508155658513	-0.280838849511796	0.778834004637029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr16-10838650-4	32.452551088777	0	1.27711805415534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75293442-4	48.2970067875884	0	1.27864267746386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114268916-4	15.2482461551461	0	1.2898657326599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30476367-1	1.81142440467212	0	1.54847246494887	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101523753-4	20.5803274434541	0	1.27918636311059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45276678-4	18.740715227732	0	1.29403933470541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100116230-4	60.9221949935769	0	1.27936703803318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48716414-4	14.1940898026609	0	1.28236781119428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22119747-4	27.4901546621529	0	1.27808177222738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101954332-4	29.9932437509717	0	1.27813830286086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58999141-4	23.3313262677398	0	1.29122293841141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37230823-2	4.79796700300352	0	1.35506590318692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28900903-1	2.38070353278255	0	2.31770742616434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5649018-1	1.72539562255163	0	1.51624670577893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58802507-4	9.92107820521778	0	1.29412783746855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120155056-4	55.8691425685772	0	1.27740009077352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-71832368-3	26.3323572069909	0.099404706198583	0.33827315921352	0.293859277601857	0.768865436661501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66282780442352	5.74536423313658
Merged-chr2-70885872-4	27.0778064724128	0	1.2818923211904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10041063-8	90.7698998466321	-0.195637853169671	0.222031355928783	-0.881127137882374	0.378249010317759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81124883833273	5.60367608499842
Merged-chr12-99641532-4	17.0589217061666	0	1.28573504594218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70476938-4	16.5652250201449	0	1.28499552648802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126415905-2	3.53285552616718	0	2.02396083658954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102987103-4	24.7533934556006	0	1.28853173402037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53474326-4	16.294331596318	0	1.29781280943751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38950517-4	15.9960912669556	0	1.2885270827194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108564227-1	5.6575223095434	0	1.31470575791145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132959644-4	33.2420693470238	0	1.28075221519435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59129198-4	22.0780452843272	0	1.27706321103627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63079091-4	26.1270310026734	0	1.2822436408097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63045984-4	20.2794650177774	0	1.27504175185208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27740360-4	91.3086914791203	0	1.28686959873654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81831621-4	19.9766917248642	0	1.28399409804286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36074726-4	22.7552605153027	0	1.28106979962126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21637542-4	45.2773852945215	0	1.28612505987418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29827437-4	14.1237444211747	0	1.27895961815932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38829586-2	4.05785665735979	0	1.55715080236642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117268196-4	12.9882603893569	0	1.2811229466514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-35693199-4	15.9135742537944	0	1.27804923193359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130646964-4	18.0923131283972	0	1.27819276560927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38491663-2	4.73435308386496	0	1.40604509983473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83494037-1	2.10259063421603	0	1.4359722329252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84179546-4	75.1078814866339	0	1.2829681068446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57921563-5	32.9192430447053	0	1.27753024237896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32190392-4	34.4887440158182	0	1.28145588944801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80839876-4	16.94878192051	0	1.2877192866651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127080226-8	95.1901473800571	1.21518811689234	0.228586018687634	5.3161086748394	1.06009850469601e-07	1.30951222850407e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6918139592607	6.89190154146849
Merged-chr6-124901265-4	71.9749009619026	0	1.2781578692878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160236998-4	16.3308768484829	0	1.28611243769909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114292749-4	21.2325119655493	0	1.28169812040204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82534573-4	12.6145926972895	0	1.28042933274808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21223766-4	26.0486180377002	0	1.27452445243759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37482832-4	38.6008518196805	0	1.27386084399205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27675311-4	25.5056421613147	0	1.27795516381069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19869709-4	19.3187783945999	0	1.2853918404927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131015586-4	25.4643389300414	0	1.28477268185668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142393261-8	66.9429302368463	0.602314955357061	0.232741155931291	2.58791769314265	0.00965580495140075	0.108098035010148	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7573712984321	5.30423976761624
Merged-chr1-74227514-4	33.0755716029674	0	1.27851495440527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86169249-4	18.8514576927604	0	1.29861652090437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16521535-2	3.83893762442014	0	1.47264206907826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36715972-4	25.3718110411501	0	1.28110469223159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40457299-2	3.99852804426104	0	1.35728580775234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116529984-4	17.1006885921697	0	1.28742530334057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105012710-4	17.0628466020546	0	1.27745784616452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55911559-8	123.867428511117	0.638643720976194	0.188890999503426	3.38101721445236	0.000722180183259562	0.0146740007012684	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.15282740621069	6.78405851721409
Merged-chr11-3133980-1	6.85949547449567	0	1.32319385041358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28523944-2	5.73752274516102	0	1.34262015625358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128731608-4	25.5954914719178	0	1.28318137276951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62130573-4	23.1803844466159	0	1.28552334270089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75834393-3	32.7271124792204	0	1.27759664259847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67350575-4	49.282918714012	0	1.27951056250222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65302709-1	2.14533456450813	0	1.56354856954927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65352899-1	3.12335134303656	0	1.38985881329886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160214759-4	45.3797873030479	0	1.27809034783059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180404426-4	31.7678173715766	0	1.27986867300977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55627291-3	12.6716753823936	0	1.3094670685719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62356454-1	1.83875863772538	0	1.65238003250078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-133869893-4	22.8184364651305	0	1.27716300897012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113640686-2	3.09402076518153	0	1.48121482717198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19915489-4	16.0384781266357	0	1.28181662011296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6456436-4	21.5081402387392	0	1.27970229955912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129033268-4	34.6533865401127	0	1.28892943357785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80209924-4	21.2163868789968	2.63048301118047	0.686650647052414	3.83088987459976	0.000127680646037505	0.00384312275263327	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.838977036854949	2.71437385196455
Merged-chr15-25634320-4	20.5527601529759	0	1.28704580514255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7567560-4	50.2336259984242	0	1.27815017776542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29397064-4	11.8844105132171	0	1.28196840950824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8709782-4	22.0051566266904	0	1.28263194076521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21064665-1	2.59334373786449	0	1.4314941942335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68181343-2	4.76760641781643	0	1.3414720452351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100529390-4	14.317678082285	0	1.2862075716458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126806014-4	40.1176557982506	0	1.28609543901434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27491201-1	17.030722760913	0	1.28312561629165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29247300-4	25.6955291615963	0	1.28780008842129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136120900-1	5.34627896589998	2.40876134555948	1.02011385950627	2.36126714985062	0.018212605303593	0.174274550617746	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49782062144032	3.20548244127239
Merged-chr14-75170550-2	5.44040186672949	0	1.35104378508688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26401225-3	16.9841840566615	-2.89454770993926	0.493327090054328	-5.86740069275437	4.42679979235093e-09	8.98365401338398e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62471040557012	1.66011170258253
Merged-chr3-18641898-4	15.9161530885964	0	1.29476525330927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81136779-4	63.280998002043	0	1.27614133956661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11232627-2	4.63687083679754	0	1.3530125682111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74295698-4	53.3491566753114	0	1.28771361171102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48698225-1	1.59210504802162	0	1.49464823471075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71234137-2	5.71223140062435	0	1.38894181878092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40230537-4	17.9821609820878	0	1.29854973470799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53404484-1	4.3750142380137	0	1.37684830875339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75188060-2	6.29745435241402	0	1.37102519663894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52976871-2	4.88450068240906	0	1.38234993886854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33168890-1	3.24063375466202	0	1.34395211618891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21432613-2	10.2299352775306	-3.0174575407931	0.62794345691043	-4.80530134932756	1.54518591427013e-06	0.000114480406750449	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75019123927915	1.40264952818025
Merged-chr1-24699530-4	32.6559021025989	0	1.28411595556246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92988772-2	11.6395964295637	0	1.29945795393151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136309024-4	31.0295076395124	0	1.27468263086045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35838542-4	20.0242988559806	0	1.28303335341412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55754538-4	53.3204508397878	0	1.27896829385123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97435282-4	47.3304035851253	0	1.28036718012769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107003445-2	4.0827114999803	0	1.34337684011467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149173841-4	25.7841633955969	0	1.27753554444023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165615003-4	21.3359497288465	0	1.28266103459266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107084728-4	13.1754357012284	0	1.28457610821749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77483876-4	41.9131359948233	0	1.27300446871072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80789940-1	2.40603466395553	0	1.43856003370946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80267120-4	17.5115920296962	0	1.28354322243795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131555328-4	11.1470995563766	0	1.28498570346354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34472722-4	19.4361328318811	0	1.27857578022039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144301160-5	34.8383284150152	0	1.28711559099706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85534923-1	2.38081565571601	0	2.15726658028365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7841937-4	37.5737873285098	0	1.27524553462672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141656344-8	69.1116554348108	-0.205879069827005	0.180853409586569	-1.1383753853336	0.254963767770423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.49779917529044	6.28874540134937
Merged-chr1-127976723-4	20.2357613561778	0	1.28717649014934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5865505-2	5.47913644418155	0	1.30996830252374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74944273-4	21.060779684918	0	1.27843352014147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23997065-4	28.8661168175137	0	1.27605646035091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112811830-6	42.7089723760842	-2.260497621311	0.420967841598248	-5.36976319314271	7.88400985086789e-08	1.00819668828731e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62611418966458	2.8260450382345
Merged-chr2-160276151-4	26.9558792151237	0	1.27920667055902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74815954-1	2.88976048901015	0	1.4401891672371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43466115-4	11.9598891122426	0	1.29260412484722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34513360-1	3.27822989574557	0	1.44729609448144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23823428-4	30.4920767834425	0	1.2793840469272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92082899-4	31.653843480865	0	1.27723562902011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118999822-4	29.8872793483572	0	1.28224119680788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71369648-4	26.7182606100079	0	1.28730992489649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65165191-4	17.0175690909915	0	1.28651995820804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20231373-4	25.8087698173242	0	1.27966009892602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35066131-4	14.1844510873205	0	1.29532207520356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77423085-4	47.9918630896668	0	1.27413290406661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66514511-4	16.3943393798194	0	1.28838037305165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89256740-4	25.8767486589037	0	1.28274567190922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102617549-2	4.92292231271331	0	1.37188783461785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89257077-4	22.7500350490577	0	1.28176590382516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58476562-4	31.0640570096116	0	1.27732948581863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158175183-4	22.5865032869511	0	1.28759294895156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56265977-2	7.62397714366068	0	1.33840576603855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96489219-1	3.71274563938997	0	1.39369250310421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24465498-1	2.0893639996615	0	1.47644163192214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9932317-2	4.14873500605343	0	1.39177136314961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66928337-4	27.9654112008645	0	1.27890672249831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35888370-4	22.1656516812255	0	1.27819928565467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32972722-4	20.0704510952378	3.75540831769089	1.01087054061415	3.71502399843337	0.000203184410066701	0.00552989940034095	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.9272926343824
Merged-chr7-90370472-4	29.2306307838192	0	1.27838516455868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33922474-3	36.4724026924447	0	1.28189192332281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83682132-2	5.68329673860473	0	1.36295638946817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111119412-4	13.0168352708793	0	1.2880252507493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59263176-4	19.3300783102227	0	1.27747360223125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55866406-4	11.8312013939778	0	1.29220978667289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52950390-4	14.8980345080589	0	1.29055802127001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17418330-4	23.6266107564935	0	1.27826662050768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127250125-4	11.5889281720699	0	1.2916422425453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18971764-4	11.8696804097226	0	1.29308835272956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119326986-4	21.0473517071833	0	1.28840355435314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27042962-4	12.3522740737711	0	1.28044353449908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12573824-4	24.6610003226881	0	1.28019414218162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126844774-4	26.7053695776665	0	1.29281914541149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-10871819-4	16.6923569563804	0	1.28106119778337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4908114-4	26.5594259033291	0	1.27551094541862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101984421-4	32.8980338500061	0	1.27774898287433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14117205-4	16.1309331525006	0	1.27966789414418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6299685-4	29.3832866509422	0	1.28095441800746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28386635-4	22.9528357749618	0	1.28142260674411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59831244-4	31.2238858741425	0	1.28617015033702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55116145-4	17.2065203524462	0	1.28259404289389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82016272-1	10.9000672896103	0	1.31363887886574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17035135-2	6.07647214538119	0	1.42490779130766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27349510-4	16.8656669116009	0	1.28244670946517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73937239-4	30.5117379102907	0	1.2791703290336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104281157-4	28.1934328746101	0	1.27617907501242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99172256-4	24.8741755785693	0	1.29575923981112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35279444-1	2.7022561890403	0	1.5374744266101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77435165-4	50.9906820306935	0	1.27870885132458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-109904368-4	13.4726212754575	3.39628416270341	1.04635997626419	3.2458085551295	0.00117117570037205	0.0214494527232377	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr11-9404206-1	4.17942710006161	0.109881442919055	0.903924924023404	0.1215603641395	0.903247205457523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46379982782169	1.88513399620689
Merged-chr10-91300287-4	18.7222367969541	0	1.28130824269212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13650858-1	3.5915596757838	0.0521865705157787	1.18767396157016	0.0439401487313789	0.964952112130972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.719438056733391	0.688405034366054
Merged-chr2-26475238-4	16.5727369312766	0	1.28542422835018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102988802-4	17.703903120302	0	1.28878900727763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7430527-4	25.7131914917671	0	1.29386209241429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37322966-2	5.55712302131305	0	1.33073210515662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102382422-4	24.0648453796265	0	1.30389719450144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48532896-4	18.621370745013	0	1.28247314121184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99393070-4	23.5177473888318	0	1.27732262272101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21046425-4	26.2182816869685	0	1.2828670936501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146933329-1	2.73466755338767	0	1.35006661799111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126438042-4	23.3831932735514	0	1.29481332474653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23279965-4	26.1415305748935	0	1.27866327435507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83885307-4	69.1552923828721	0	1.28109438761768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44422339-6	42.850969856961	0	1.29053559065323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119863614-4	35.8223267049449	0	1.27604750106093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-81437665-4	19.9851999987075	0	1.29757740326945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79419989-1	4.22277723459585	0.273602957415255	0.935220077611992	0.292554623200432	0.769862602289795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77365246583801	1.64254215594465
Merged-chrX-140520373-4	38.1744371130581	0	1.27883598640949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25780803-4	19.4801879092407	0	1.28286165152221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68058863-4	15.6411391235177	0	1.29348794015538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76527536-7	41.2151400282869	0	1.27862664683743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132804626-4	31.3994499049483	0	1.2787404293243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71807492-4	10.8029420883274	0	1.29710669614242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4942701-1	3.77869665233384	0	1.36507563536101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-26243277-2	6.10785025334051	0	1.31904421516047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32668197-4	13.8719446485831	0	1.28448799502388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34464781-4	24.3005178811418	0	1.27860749668935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32718097-4	16.6836811425129	0	1.29466795947073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46687247-2	7.821235720825	0	1.29248433416121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15156923-4	29.2564929348898	0	1.28100453497021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6778422-5	39.4159905011773	0	1.27474183801909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90617283-1	2.42320640279722	0	2.27241905751572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116620573-4	19.3113153102057	0	1.27867972075342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9760200-4	57.8067329169146	0	1.27440683879045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93877838-4	18.6933228053123	0	1.28217337690692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68557096-4	15.2692652979166	0	1.28972830174047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138288920-4	17.8385363852037	0	1.28312446833647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34821626-4	15.7524529746008	0	1.27944762550697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96058466-2	2.75836834722971	0	1.42947044443387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107481655-4	11.4928560826699	0	1.28393356327103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-37597533-4	22.7246648852559	0	1.27645458743808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168170390-4	45.5304292919617	0	1.2769843220032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100163339-4	40.7027030121955	0	1.27703447128223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24626379-4	23.767848140893	0	1.28791260437272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84032901-1	1.36808598908224	0	1.93685066389482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27714345-4	23.5833250089435	0	1.27818065146327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102068840-2	6.55929165064029	0	1.38694623933309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86198780-1	0.899117834409051	0	2.36192045622413	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103010702-1	3.74501554181345	0.0527531490528839	1.05424585033041	0.0500387542776202	0.960091505541058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35949335556742	1.35032549026822
Merged-chr3-144677643-8	92.2406890484343	0.382741908170005	0.164490966135961	2.32682631247754	0.0199745113697075	0.18713325017418	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70378499464298	7.11926995506686
Merged-chr2-117027302-4	21.3146871998197	0	1.28297251748448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66873538-4	12.0553273745264	0	1.28032257309864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113704120-2	4.29675745658318	0	1.37479244295856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167326346-4	17.4504634386065	0	1.28732191628376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22880149-2	2.94228209508388	0	1.41930525019316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90019763-4	42.3488929385245	0	1.2817582241488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127425105-1	1.49795108694604	0	1.46882604727975	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45752943-4	25.2944568416908	0	1.28487985095614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36214253-4	13.0118208880293	0	1.28214398324759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43273679-4	28.1765715185479	0	1.28249918213471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184478189-4	33.1543431709498	0	1.27741799498468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5591761-4	62.0634700519527	0	1.28770917283024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33985562-4	13.0212769677266	0	1.28441586657451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43346288-2	3.42143577388099	0	1.43558878284358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57337240-1	12.4970315370984	0	1.29139992057223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91779197-4	31.6602165611411	0	1.27796323586745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49242919-4	16.9910607096791	0	1.28470795865007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101389542-2	5.4686227798004	0	1.37342901794535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191201355-4	31.7352479026712	0	1.27830922441325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70755430-1	4.05579609944472	0	1.34614034408225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36697823-1	2.34666400424345	0	1.41359749336918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73067536-8	146.681625712375	-0.250406540927296	0.248664233991372	-1.0070066648024	0.313931571402321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66319138660217	5.39494145997891
Merged-chr6-97866762-4	25.5238343437226	0	1.28038267439824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167058446-4	17.4406344786306	0	1.28436125146448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51920589-4	26.033127858461	0	1.27669285936014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78457989-4	30.3778281577976	0	1.27618828038861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104232177-4	13.5707074809601	0	1.28413212064354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27924183-2	10.4612455206737	0	1.29549334097689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119716015-1	3.12858520855943	0	1.35323786808101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-74990173-2	8.30221297449943	1.32742319665406	0.867664239420613	1.52988118715191	0.12604614082013	0.734755675114379	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974321679128649	1.34557707159302
Merged-chr12-16881946-8	96.3378500370886	1.31387292584527	0.203046736630768	6.47079065463878	9.74914268996744e-11	3.42509396891727e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72856476935135	7.02127804669318
Merged-chr14-45239197-4	14.2618395470469	0	1.28181227568517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32375358-1	2.31860335737512	0	1.51910036150399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40555194-4	20.7789232854671	0	1.28424877840275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135472605-4	36.1696232895862	0	1.27646899823243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32486930-2	3.80798967585113	0	1.32516090375328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57760933-4	25.3358119130277	0	1.27621601815592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69560127-4	49.3789438681293	0	1.27616788289226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4368415-4	12.6654527409	0	1.30421356283687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35130523-2	24.7553930301489	0	1.28819866390449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38710624-4	32.9858410481667	0	1.2761662596305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21515494-4	19.2074404166182	0	1.29242357744747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129049241-4	20.0043592752683	0	1.28310579669028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55453835-4	31.1262313628253	0	1.28496733835412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113634076-4	33.307897142431	0	1.27582345914376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45316349-2	4.02153186041813	0	1.38247529427051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-30510168-1	1.78696066458406	0	1.69766701671334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46508379-1	3.87734926747717	0	1.35414083192744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17731967-2	4.56035503195137	0	1.35519722596536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34918653-4	30.1848744114167	0	1.28701259857297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107919782-4	15.5097185824376	0	1.29611172045821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-112330467-1	8.10727375784377	-3.93594176680738	0.782209468525996	-5.03182577708284	4.85830678581281e-07	4.57699689295682e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22592192834015	1.34591112769102
Merged-chr1-88705955-4	19.8572208794613	0	1.28052506317267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102810163-4	15.9128883501813	0	1.28668085272724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50993495-1	11.3950218539419	0	1.28156664346682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-80311292-4	26.9793600186454	0	1.28167709352852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123654940-2	2.89654817936133	0	1.42382451555589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103758658-4	23.1637495158243	0	1.28180801972157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99303080-1	2.45447285829375	0	1.48146093594642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70163986-1	1.78055087213994	0	1.5098086934982	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43664198-4	16.160819953482	0	1.27914282446597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44659690-4	40.1674651087695	0	1.28487218913996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11192479-4	17.763376839833	0	1.2790790878453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83314585-6	39.1324204537548	-2.64232745607491	0.524839780397539	-5.03454112047964	4.78994852708433e-07	4.53628951378047e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57325296658846	1.5122114716189
Merged-chr4-150799646-4	27.5557095310909	0	1.27540167177272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119824984-4	23.469274435394	0	1.30467357630272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63925499-4	23.054696342048	0	1.29029239867605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6273597-8	57.0751988754408	0.298566497915478	0.212958957956326	1.40199079099884	0.16091799667757	0.871341349924801	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59964588099908	5.82192272035096
Merged-chr12-85486093-4	65.1273561045272	0	1.28451683666422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89383761-1	7.14304845245598	-3.7299393817251	0.766588881267502	-4.8656319871975	1.140916406869e-06	8.90732658581385e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91575891120346	0.735627456805112
Merged-chr10-70201063-4	22.9591778348102	0	1.27825837595218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63422095-4	13.069784712292	0	1.28684213589297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3161384-3	19.6482343573581	0	1.2854445355758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167815287-4	42.6081655695629	0	1.27668590766873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165604404-4	12.9179684402148	0	1.28688509573835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143918560-4	21.7034332622467	0	1.27755155539662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60749164-2	3.87845791003546	0	1.44172748615109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42639745-4	18.5616160334169	0	1.27930826347628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99163716-4	32.4888333553161	0	1.2835559790648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46993398-1	5.98361809615711	1.89670072394555	0.754211296008168	2.51481346670921	0.0119095376911821	0.126604953630711	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.872260231715655	2.91790730682473
Merged-chr10-99179815-4	55.5421287016893	0	1.27744153484686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64293772-2	4.86070278808138	0	1.38441974887635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4453171-3	49.6185140728676	0	1.28575426228283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12754464-2	15.8525998325467	0	1.29110541031837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8010063-4	38.1409703839447	0	1.2806117783757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47178004-4	31.7319794941424	0	1.27738259158619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11763554-4	51.3746967489539	0	1.27333272190411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25107266-4	24.4278346712753	0	1.28127614287585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57181386-4	47.8477388169773	0	1.27933015444576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10496183-4	17.6846200133935	0	1.28037348911592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80157422-2	5.50752985741955	0	1.37293887763078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81522234-4	20.1772183459813	0	1.28253967646542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21808328-1	4.86359366708431	0	1.32190434831745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98668445-1	1.73820806484043	0	1.53845747413396	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64327683-4	25.987286314529	0	1.28042638037567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81358616-1	2.30074812372868	0	1.42399094455837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53794991-3	43.9701830930721	0	1.28334262098734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25504312-4	38.5460975389799	0	1.27352585149729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66898054-1	2.76615191319838	0	1.35815893747674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66225143-4	16.5484759092432	0	1.2900884827791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58262257-4	28.5550486828729	0	1.28099572401639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106428223-4	19.1503213599	0	1.28459881040275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47330862-4	18.1634834250876	0	1.28814833078292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42396229-4	22.6592999827195	0	1.28492773910232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15471352-1	2.21090421845938	0	1.53520396971438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13012819-1	4.21914499204271	0	1.39340784522532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81571744-4	43.8141956373266	0	1.27747726633954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166696797-4	21.4500996992677	0	1.28897557581913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31406288-3	7.54726416328672	0	1.30306712126471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97965087-5	29.7707212215998	0	1.27758098483244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38866013-4	12.416197715584	0	1.29354167184084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170205496-1	6.12035899521292	-0.854834494057474	1.05934943894972	-0.806942886480396	0.419699388922267	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46168047071888	0.844015785373878
Merged-chr10-75282849-4	26.5492788063915	0	1.28158394666353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38248816-2	2.90635469069847	0	1.35167819239345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130457422-2	3.71205817683723	0	1.4214601716685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66611845-4	12.1248848076071	0	1.29190930319723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13940671-4	18.4126103928595	0	1.29669919340093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59396017-1	3.97124669189285	0	1.34216484932473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183350010-4	13.090845474838	0	1.28688520986225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-90975179-4	47.6353602611521	0	1.27955181269352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38011533-9	95.6325960892464	-0.133517284189771	0.161725671301381	-0.825578791019247	0.409043070330065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.8946515686913	6.74516574223313
Merged-chr3-96278178-4	14.4146072986838	0	1.28474710302535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36162880-4	24.7154026405074	0	1.27794765889787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105864634-2	3.14051494372643	0	1.53396140727463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3356061-4	24.4910380332585	0	1.29700785722784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102688380-4	31.047552473294	0	1.27728815616616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135912047-4	22.6795132731273	0	1.27804249929581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24104194-4	38.134935008133	0	1.27880692530505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118674407-8	213.104345203262	0.609075584218222	0.160070469481994	3.80504652850248	0.000141777537018842	0.00417512164670267	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.48162388629722	8.08289149001936
Merged-chr13-9882483-4	16.4405027976145	0	1.27877059041505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117252885-4	42.5962146156167	0	1.27351740642804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69134427-4	38.8933574926703	0	1.27822126111698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114684765-4	33.6511578008596	0	1.2814424708685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57331145-4	14.7834706764847	0	1.29361957754899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-39848721-2	73.4520418896767	0	1.29112144120721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72162370-4	25.3766795148667	0	1.28249818523962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32179736-4	29.1972370978955	0	1.29472216773257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100994450-4	15.0865184932635	0	1.28301303628709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136142577-2	13.9950916440348	0	1.30933875471219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51895023-2	3.88794864609191	0	1.42065977221617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54918405-2	8.48842729696661	0	1.3010036545927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13423730-2	9.55165649201402	-3.92973224623888	0.789403987602552	-4.97810032373109	6.42113733504217e-07	5.67021135534684e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18567408484583	1.20539659680455
Merged-chr3-121570895-4	50.266367198415	0	1.28210957430571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25485699-4	33.8945374259205	0	1.2751592998842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98506450-4	26.1750365404162	0	1.27612188494539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108881128-4	17.0479391688766	0	1.28058146045962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72487192-3	8.37176401344951	0	1.29364253218627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94724318-6	32.6796791498942	0	1.2789383304417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4195796-4	75.3874566825151	0	1.27992033531075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3141913-3	23.3351098643796	0	1.29041979069524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129528537-4	20.2169091345551	0	1.27745325860736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44976575-4	21.8069520246577	0	1.27781276396018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128722394-4	22.7130643927237	0	1.28326451371959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16214522-2	4.23258665822479	0	1.44162260775344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73169529-2	6.81092649763757	0	1.30351022679078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45049842-4	35.1040571060222	0	1.2760302500414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98816176-6	35.5225854870589	0	1.27420030763577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39418575-4	21.3172440459823	0	1.29191846347325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88132932-7	76.5478925906024	0	1.274336050629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13721371-1	2.73771477755208	0	1.40626450421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21913239-8	125.961309101922	0.149282834872105	0.169861133202586	0.878852225094144	0.37948140527482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.04491865015657	7.18197518865285
Merged-chr13-43864664-4	50.364345252762	0	1.2816685952952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98283685-4	22.8030173531511	0	1.27841296659098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100626835-8	79.1871396975327	0.639608650927313	0.217182098077866	2.94503394427102	0.0032291923366708	0.0468609376931134	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17391265557785	5.7690818140749
Merged-chr5-139479303-4	18.5071076180915	0	1.2943067584071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17176865-4	18.2523786527096	-3.61164023721074	0.681400963327652	-5.30031571950403	1.15602596890483e-07	1.40151526834981e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19491412287102	0.961728545204858
Merged-chr13-100848869-4	10.8543849450551	0	1.28566911032752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81719912-4	25.5625996847101	0	1.27518971962873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57732067-4	13.8782484691554	0	1.28113720298131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11014690-4	23.2778615885171	0	1.27992863487677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14531278-4	20.133656981805	0	1.27916353276646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70057150-4	79.3504772125144	0	1.28213706388099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61349903-4	51.8852272783945	0	1.28029992973143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31569342-4	29.7498642462563	0	1.28378957559141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182528129-4	32.0435289908373	0	1.28489684163206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47226018-1	3.72079006709127	0	1.31878221897205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98709270-4	31.6522986315998	0	1.27430501230531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-18361995-2	3.19141293179254	0	2.32269603220928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-40131-1	7.46682155276323	0	1.32384538743309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44274668-4	50.0083235424458	0	1.27761897435943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64075863-4	61.7448010828594	0	1.27724601328985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-109443231-2	3.88294771712525	0	1.40213120605958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80943148-4	10.2498560456382	0	1.30298949532136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45653179-4	13.6372378624605	0	1.28196093920453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4169534-4	51.3300120072279	0	1.28068523661175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135582616-4	21.3317502187294	0	1.28043576517394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8862449-4	14.7295997521674	0	1.288663021874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97991661-4	14.3053698178467	0	1.28548013831097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101972953-4	14.2697394088571	0	1.28463803587143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19168354-2	4.72963784413373	0	1.41373451761062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160146971-2	3.15172429435424	0	1.3513942710727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150921820-4	29.1597132451515	0	1.27626089814316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43500324-4	13.584721967388	0	1.28791723839473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119857999-4	17.3169389109969	0	1.27999982105063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129574689-4	34.5017387712173	0	1.27547912960379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90293047-4	84.2115271905198	0	1.27962102554456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114818505-4	32.0110235663957	0	1.27861936661359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35597281-8	69.820853035779	0.0773329373619634	0.204607793746888	0.377956948490577	0.70546257593828	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34144274487133	6.44101839265912
Merged-chr9-25244127-1	2.8903147689448	0	1.46822760666042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108876200-4	7.77651184026419	0	1.31106907980286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25510832-4	51.9784829090454	0	1.27767626297506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99380380-4	68.5075413511565	0	1.27835466069954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83315559-4	32.8919060635242	0	1.27886743089598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166788166-4	29.6431079539962	0	1.27994017010698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90233502-4	27.8816331686921	0	1.28605956020207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105803557-1	2.32829438833854	-1.89391821897941	1.2240409830068	-1.54726699944891	0.121798875871488	0.717594547665935	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9382466983604	0.729295484888209
Merged-chr1-179434914-3	15.3211410982027	0	1.27817519861847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91668706-4	43.9940899392405	0	1.27663957337323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45749673-1	2.0636507610032	0	1.40511199384473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103481761-4	26.8458192240182	0	1.27663429685696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22699607-4	13.0195963677005	0	1.2866961289404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114648812-4	14.9469115176142	0	1.28627609681001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70066151-4	95.9902134890809	0	1.28284662093487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16965826-4	13.870190316561	0	1.28259687191806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34031566-4	64.2728371031147	0	1.27815115088862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117091975-4	11.1472379567817	0	1.28573317791379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70622211-1	2.86215281857182	0	1.38630352766235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35813837-4	35.2430039548852	0	1.274811833184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6471268-1	2.00346184577263	0	1.54573152979812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151118721-4	12.9661345492099	0	1.29087254265853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-47918297-4	26.9686469407176	0	1.27980830336038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9424684-3	9.64193873686002	0	1.30021261551413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57455812-4	17.3130391446943	0	1.28552158091658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-118793099-1	3.50140071801176	-0.444670953694047	0.894165830624459	-0.497302556711993	0.618975709076488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38503695483524	2.21565186750098
Merged-chr19-21461805-1	2.97286991717799	0	1.34362325455287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72260823-4	67.1732470446701	0	1.27898987796326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121317121-4	24.878352592117	0	1.27717320625001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69332277-2	7.71499053285601	-0.477255704848217	1.08286740966799	-0.440733279612268	0.659406100783834	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13347360239158	0.563523181795778
Merged-chr3-25710151-1	2.84570948880568	0	1.35573461435489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32309581-4	22.2888450255481	0	1.28895268352791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99487154-4	11.6342851033698	0	1.28111064354517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11343514-4	40.3147462217164	0	1.27578424836629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77836930-8	83.4077296196149	1.27255507446174	0.200457645807813	6.34824912431521	2.17779218868668e-10	6.84182732509231e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24390601041435	6.47714339878445
Merged-chr17-81580609-4	14.7722798012363	0	1.29056393654484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46336520-4	27.3275519456749	0	1.27795983162515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105027896-4	21.6865114387847	0	1.27959842965143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124037928-4	28.1390872967704	0	1.28281098153033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160211895-4	10.8384283369877	0	1.30798491530792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6378984-4	28.1360736150072	0	1.27650069421775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156680877-8	157.515348058724	0.352949044707216	0.13513389173825	2.611846962795	0.0090054556198251	0.102378306007845	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.91445467841735	8.2727738874899
Merged-chr15-85634721-13	250.551378086766	0.147145921309166	0.184995663735873	0.795402002066672	0.426379695719811	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.1529813181017	7.30054910030866
Merged-chr15-66092322-4	21.0292453014064	0	1.28357494325763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8276844-1	6.3994191262327	0.845444245475824	0.720962215576686	1.17266096226633	0.240931792026907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25650304339177	2.46189523840421
Merged-chr7-75823325-1	2.98125483349624	0	1.34879727031203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127351877-4	28.0275859796322	0	1.29151732309769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66795467-2	7.10262873684072	0	1.33645188644225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13538789-4	15.6873158126558	0	1.29216025142239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45089662-4	47.7143511418355	0	1.28729183214214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102297213-4	29.6256321397023	0	1.27658691190926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50255076-4	25.317931127961	0	1.27975448875112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93142285-4	26.448956001558	0	1.31311785742379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67161854-3	10.4538030951098	-1.23694437743229	0.882157830108254	-1.40218035278392	0.160861397090625	0.871323395202934	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57274321728782	1.41695929335733
Merged-chr10-118085381-12	340.408664861167	0.362856746420617	0.138719931480498	2.61575061743473	0.0089031557118798	0.101374039579804	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.65938635845389	9.02548629675799
Merged-chr10-117867507-4	18.3502401223262	0	1.3122184333411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149246180-4	35.0880567086685	0	1.28096004723035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63901591-1	2.36708578931057	-0.756355071111553	1.19934562723617	-0.630639787176722	0.528276077640891	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16903949172938	0.469435083901436
Merged-chr1-7894863-1	3.54428564933941	1.45645553224655	0.821811531301136	1.77225005584992	0.0763530578061678	0.507683444965487	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89629401480567	3.52310433300605
Merged-chr4-138943906-8	75.7648523411916	0.685578151246853	0.177338826945399	3.8659224438083	0.000110670105459867	0.00343446243306995	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28103558440415	6.94573662739537
Merged-chr13-36534302-4	46.8924142435758	0	1.27886141496047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125124577-2	15.0927840880141	0	1.28231794184083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32857818-4	11.2111749439613	0	1.28687621767836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84183637-4	22.7064018848008	0	1.2764350767871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113351682-1	2.62441123171218	0	1.35930388917588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52288071-4	16.9961678790096	0	1.29039484961043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5570448-4	34.238114418449	0	1.29174243173617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72852721-4	39.0744589045659	0	1.27422959916187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19895841-4	26.790429408995	0	1.2771638086106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92822553-4	15.9919650738075	0.573118190289409	1.02985325874275	0.556504711155717	0.577865874720363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.683637474991079
Merged-chr17-63849747-4	17.4564525535171	0	1.29223648072553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84752953-4	20.1647042410859	0	1.27959417160544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104174955-8	92.6190621902774	-0.0402388161305315	0.192194291152927	-0.209365303668224	0.83416307619273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56116375635873	6.47966155821709
Merged-chr9-110849423-2	3.82409079217303	0	1.40904508802876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128373479-4	80.4885678191551	0	1.27731183630705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80099034-2	3.59579990790154	0	1.38759175401778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70838682-4	43.2011841193289	0	1.27742913075342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126881970-4	19.1627641582181	0	1.28954020986456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14892812-4	18.9091490454872	0	1.28123926467686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57407588-4	15.5785543850007	0	1.2780040660573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107441166-4	28.7415794940239	0	1.27866201163263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117949480-2	4.928673798987	0	1.34712087656299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39594909-8	70.0671930215251	0.658030227243056	0.22975318033718	2.864074509338	0.00418229620654884	0.0567933889043268	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72011863881774	6.33790008103122
Merged-chr1-34028931-4	27.6480451592502	0	1.27910565786446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95072799-2	9.21143593609582	0	1.33217920712403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118097737-1	6.69029635339861	3.38963208710678	1.08631713208229	3.12029699891541	0.00180668778181222	0.0300101219599138	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.62635771927786
Merged-chr1-13648066-4	33.6524145979308	0	1.27602515510479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-1977-3	286.76239868348	0	1.35729371292056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25561381-2	8.20650727587157	0	1.36107314820804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134095215-4	27.7190616882891	0	1.27934948069382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149842051-4	24.5782569818829	0	1.27797029686155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69512440-1	4.82424190092653	-3.16059865747353	0.968516135646454	-3.26334125075152	0.00110106851153475	0.0204520815675809	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52521528389252	1.08186277552917
Merged-chr5-146676657-8	56.5938541081032	0.237110595970626	0.23503835262329	1.00881661790175	0.313062589826809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38414789329359	5.63898495139744
Merged-chr10-12868328-4	13.8802342486394	3.9921876443339	1.02357281297259	3.90024783165162	9.60942693796716e-05	0.00306610162445509	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.47934711566824
Merged-chr17-8868095-4	18.1066592306919	0	1.28761072637194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54903033-4	15.1322282936096	0	1.28443345682219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100357181-4	22.1115489111988	0	1.2791828427374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132611519-4	34.7267159973001	0	1.30581069742328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46999123-4	18.4906927267744	0	1.27775800147196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119856812-2	4.42787049582742	0	1.39821893108672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106998802-4	13.8314811305947	1.32087672736512	1.28395980457787	1.02875239758723	0.303596040796924	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr10-21827662-4	18.0185654055038	0	1.29952682307294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103305322-4	55.8447401845778	0	1.28137764770784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64655783-2	5.40564042031675	0	1.38261988900869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36673371-4	18.2105206035019	0	1.2840823994942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98805032-8	141.492800907199	-0.112623365068661	0.188212353781004	-0.598384552374838	0.549583370750886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.18863958300852	7.0975453400136
Merged-chr1-128399243-2	5.3789149289335	-2.13349940418608	1.12164229484149	-1.90212103626815	0.0571553329065809	0.409595284126133	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32571570309303	0.683637474991079
Merged-chr4-3510822-4	31.5222498648762	0	1.30064343094612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11139920-2	4.95590882237994	0	1.35833593022054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105771604-1	6.32144620230855	-2.14752589819043	0.72349196067168	-2.96827886822224	0.00299472496395374	0.0443076976537123	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45474415266864	2.12695852494485
Merged-chr13-60627181-4	19.5261874469617	0	1.30247155629723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20060791-1	3.65453587600322	0	1.42091466562946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93912168-1	1.98814161294665	0	1.54974011112839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46378781-4	22.4902654131537	0	1.28265738287263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9337366-4	18.9304068765727	-0.882221829218098	0.872708084256821	-1.01090140578837	0.312063621138559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42740002323328	0.73596151290311
Merged-chr17-26886245-4	14.2003865343024	0	1.28286915247679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38900310-4	27.8768607516494	0	1.27811975412539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24103078-4	38.2450236800736	0	1.2851494265931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98956432-4	22.1655054065366	0	1.27547988331515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6779039-5	23.9197355244865	0	1.27875015309553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116953501-4	23.1021819440018	0	1.29438495175144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67772512-4	32.8680272259804	-0.482379733234536	0.516106903986143	-0.934650804918292	0.349968287415209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1451080237312	2.58707500045288
Merged-chr2-19004947-4	26.5416649042073	0	1.27866611020799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76884702-2	5.14043504652453	0	1.32775880465788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158160080-4	27.4010462187114	0	1.28625042958183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84529377-4	12.1804389781325	0	1.29227274196926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56773628-1	2.76573314358209	0	1.41914477740747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16652620-4	21.0359361747933	0	1.2794871239642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26805103-4	15.3079753091887	0	1.28742949349057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76330185-4	26.2903926480849	0	1.277423532799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34399354-4	27.107543402146	0	1.27742174179612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137973534-2	3.30977433447817	0.10810738903563	1.42882059990865	0.0756619753680355	0.939688028500432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr10-39417797-4	16.2721237182961	0	1.29903380001231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180766851-4	16.7437094332513	0	1.2884972783397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119403025-2	5.97660764433887	0	1.37925236235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172277342-8	51.6060631569434	0.201018732282326	0.220107999058439	0.913273180176224	0.361098884184052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67142364175148	5.90983975048783
Merged-chr6-121226984-4	25.8129609898579	0	1.27681957896296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63506091-1	2.20781565557293	0	1.45008332762607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62504049-4	38.7942639263864	0	1.2746798185167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3185125-4	48.6761300177583	0	1.27936634512569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20945539-4	25.348079683004	0	1.27878629256052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45196717-4	23.4763986510995	0	1.27485686267225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121352445-1	3.49153595828151	0	1.33388011150486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107242819-1	2.13416785413559	0	1.40901218557097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50024196-8	160.396187626678	-0.15791143339011	0.165221843030237	-0.955753975951056	0.339196545617219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.49068937519834	7.33898319583138
Merged-chr13-4712878-1	3.61351545196736	0	1.49332065921091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101247361-1	2.88980546544182	0	1.36114312899946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45276858-4	44.3328354630517	0	1.27562956037087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59401193-4	23.9321857390139	0	1.27923675473173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52390517-1	3.07208872149561	0	1.33677749388639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109023179-2	9.29779902021731	0	1.29122101681366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59120073-4	24.3760777921632	0	1.27815664036197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51809768-4	15.9574032964514	0	1.29206590520583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84785354-4	60.1428228893695	0	1.27759166989787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99182332-4	17.9187463380573	0	1.2821508243087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86430210-4	16.6367062746209	0	1.28540095390694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127290407-4	21.5370831205164	0	1.28786865733255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98835627-4	12.3546099311906	0	1.29795150538538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126628749-4	17.4013285421905	0	1.27931990490028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117939874-4	16.8674830522543	0	1.29148715986884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80107344-1	2.03261819940139	0	1.42869286777575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47394401-4	12.7700016881742	0	1.2836281043159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46833465-4	29.3474489212042	0	1.28203805137882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129495913-4	48.4790696619383	0	1.27973696046638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75917879-4	24.4334950809111	0	1.28904874357373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12433050-1	2.72218066185715	0	1.33057640270234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-17603801-1	2.19204245367324	0	1.37702323544859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69699956-4	21.2467306503399	0	1.28413731848296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82838581-2	7.96931716935372	0.591543731250023	1.04689980406925	0.565043310688113	0.572044305654572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.856023420615499	1.04220233489076
Merged-chr6-140767469-4	14.5071243349391	0	1.28327276061095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19167235-4	25.6204621594892	0	1.30566735206872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10741286-1	2.35684505986716	0	1.46893418761759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122572903-1	2.196693785136	0	1.4539343224462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19713265-4	24.0718254752268	0	1.28041816624008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135962555-8	199.069201841047	-0.896936394356341	0.214736675489412	-4.1769129204972	2.9549208209637e-05	0.00119710016098384	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.0476370042301	6.14330211070492
Merged-chr9-13495242-2	3.52218937338658	0	1.46369489079737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46612357-4	28.2654283967443	0	1.27492299521772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63708823-2	5.97594457468411	0.694365370504004	1.57072992741469	0.442065410727151	0.6584418733657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0.581381506691384
Merged-chr2-32882823-4	37.8661936725343	0	1.28041390803861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28306923-1	2.21178924323328	0	1.42329662544944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43880402-1	9.34019558813105	1.89509445600171	0.543279725879854	3.48824807134586	0.000486196759340694	0.0107661855085994	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7995706718511	3.78371563946567
Merged-chr14-48422198-2	16.319989414928	0	1.29700978068818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94273445-4	27.2260811228666	0	1.28600733539802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32908416-4	15.7848636025579	0	1.28427847171537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49952046-2	4.46601117003452	0	1.36590450304777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114928384-8	63.1429240373332	-0.11791895871009	0.305585755131298	-0.385878453854714	0.699586688465074	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32678521034472	6.28024204980647
Merged-chr11-90225404-4	42.9953680867133	0	1.28256379074371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-50105-1	4.40267858252909	0	2.43325221249778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96185817-4	10.8904854372222	0	1.28424474877612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122571445-4	29.5916609371301	0	1.28064127854619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45246776-4	31.7580190569186	0	1.2790693529205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125379160-1	2.54500319772487	0	1.41409545664224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27228242-4	24.8378151718998	0	1.28346897723021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164936126-4	27.950113068468	0	1.27991117538913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35808095-4	27.9514657555226	0	1.28359166267943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56141783-1	1.67104179087535	0	1.59321802108696	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43420025-4	20.5035491503838	0	1.28615425609402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87806215-4	20.7955672344855	0	1.28453975079449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110707012-4	24.4549204537839	0	1.27777042656632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-68735392-4	38.4473388291474	0	1.29701992447599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146247870-4	39.8527485109735	0	1.27636042753217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88706087-4	15.5355984202008	0	1.28476929373031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75121237-2	5.8515249190461	0	1.33562719144601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56801469-4	13.7753021493254	0	1.28434258453259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33401432-4	18.8354494343741	0	1.27773951397648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86278316-1	2.67140172253374	0	1.54581075948065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140611241-4	19.7057628314732	0	1.28115400349414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75867413-1	2.20095576358676	-3.64746307748159	1.47828428617805	-2.4673624089665	0.0136112520070068	0.139651573818475	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71127819849127	0.423054662900563
Merged-chr6-83044972-4	26.7942493068325	0	1.27887367012681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64379156-4	53.8264920731654	0	1.27677965100561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22359212-4	23.0071723693963	0	1.28123582096717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9389427-4	20.4183986508815	0	1.2815101676234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95833503-6	35.5942546925809	0	1.27448041287572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40136196-4	22.4624541764829	0	1.27855184840217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109051996-5	23.1076647508715	0	1.28344637419581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95372101-4	27.7965597132207	0	1.2805834131845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167335273-4	30.998820430499	0	1.28048119814757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8535612-4	13.9760732657389	0	1.28698981184237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29513462-4	20.4559996629554	0	1.28018926671969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17518677-4	51.5312258402446	0	1.27902259839899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145111531-8	123.439178320013	0.556533822621677	0.17017460218809	3.27036946445482	0.00107407100673413	0.0200646781035015	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37622521884757	6.94383746866802
Merged-chr13-37963605-4	17.9658360223097	0	1.28545034272568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4677905-4	93.8160810713307	0	1.27668376315934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100678756-4	19.2655136128958	0	1.28209790522679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6601514-4	19.5810730497398	0	1.28114024210959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-150925259-1	2.69607597345489	0	1.35181930031593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99441255-4	18.3878841898846	0	1.27983203242399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32138087-4	58.5963879056219	0	1.2788135076779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113573558-2	3.38611590707989	0	1.44084301839972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50494255-3	9.21553112558999	0	1.3172441506541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133911091-8	173.544853488499	0.206440993408811	0.172373268691892	1.19763925680271	0.231057486297738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.08025851373383	7.28164097675816
Merged-chr6-128839661-4	14.4187820667819	0	1.29239142491922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141271852-6	66.5023122384634	0	1.27761053550735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85114127-4	27.3631656152039	0	1.27712982527066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191275860-4	52.7722043478931	0	1.27849938687856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86472380-4	56.8002689908495	0	1.28131764291397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-53434464-2	9.6433466965606	0	1.29533266219812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128706762-4	30.0129788574289	0	1.28646074347693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135990797-4	16.2730904282383	0	1.27906322058746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5802410-4	28.3977274875496	0	1.28784038250781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39570667-2	2.79177377953732	0	1.41641570007165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91038189-4	18.9763326169997	0	1.28019368199331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76226677-4	22.860516870415	0	1.30323913425089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138519423-4	19.2874923663062	0	1.27878139790461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59332745-4	13.0256444469842	0	1.28901159599399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119784958-1	1.64049456887029	0	1.41436075150308	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64187578-4	11.4856731990377	0	1.28749575519988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116672959-4	33.3292123761298	0	1.27506953753548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5093830-4	41.4440860079195	0	1.27426417511001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-37164-1	29.1092859368055	0	1.28446264298314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74349877-1	2.10813530014437	1.77454008924678	2.35938952393778	0.752118321812797	0.451979906655521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.733321818366247
Merged-chr17-84141183-6	34.999591025568	0	1.27439758879343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158174670-4	33.9340537838062	0	1.27540816983329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72259525-4	22.8663202105305	0	1.28544869717933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27227892-2	4.33665211139484	0	1.40760581878301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135914125-1	4.16505011961092	0	1.32396451365852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152621995-4	24.5765212620878	0	1.28405056831269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40247473-1	2.84296640543024	0	1.37105514491084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95624516-4	34.2821166370996	0	1.28318470353413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24591952-1	2.97817982643133	0	1.41918544211299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65938154-4	16.5567233578319	0	1.28658086512049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51315728-4	11.2728964287496	0	1.28565478222976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70798002-4	13.1250772604619	0	1.30061942310322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23297007-4	22.0233123685963	0	1.2865664460851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69554965-4	35.0480520501713	0	1.28041968880006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34360196-4	13.7363326786298	0	1.28576033598549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132008391-4	23.2278114087253	0	1.28076340730493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-160510409-4	18.8003949667075	0	1.28635734484329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66806468-2	5.10966941555504	0	1.38034825246804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71656974-1	3.49982545569445	1.29974392646737	1.18148691978634	1.10009167659885	0.271292180013526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	0.989878296978726
Merged-chr6-91716434-4	31.6541575975598	0	1.27883679565788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80582776-4	15.9382352259962	0	1.29285749606984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120100076-4	23.7889037867904	1.75344978199884	0.650795515902905	2.69431755313515	0.00705329297642295	0.0845625501209818	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39458212797219	1.93997370148483
Merged-chr12-104124187-5	30.707740223878	-1.51068494366976	0.362633251196272	-4.1658754090703	3.10160067139866e-05	0.0012457111092392	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55813250950068	4.08683071130443
Merged-chr12-73687587-4	40.5366783580737	0	1.27357458575242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44119934-4	33.3453942766667	0	1.27649867564352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70945006-2	3.82773565232692	1.02373616420887	1.2634357969907	0.810279530346731	0.417779537276996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	0.73596151290311
Merged-chr4-35100005-4	49.3892082256016	0	1.27533623315902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108445242-4	27.1613740580296	0	1.30232984069612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167925164-4	75.0267374704701	0	1.27968464930169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53254696-4	45.9820045914765	0	1.28220666453786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4896819-4	20.8802633916539	0	1.29383669207518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44953127-6	55.3841895750554	0	1.27768632052151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45704768-3	14.6404628825763	-4.12670908030167	0.861378377733746	-4.79082037229549	1.66100778964072e-06	0.000121681855405675	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75007466273379	0.994591904006138
Merged-chr10-18943498-8	117.425828641172	-1.14692304172572	0.26495360022416	-4.32876941757115	1.49944822333621e-05	0.000700378438900128	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.61069917378137	6.38337649124651
Merged-chr13-34709213-4	31.1750116827625	0	1.28270981996447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100596516-1	2.45692683745863	0	1.39410705400413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121681002-4	36.9580091576794	0	1.28066852174256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160621421-8	31.7969040088564	0	1.27666811740004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35259267-8	108.012646421431	-0.219864882622345	0.183352119084891	-1.19914012294861	0.230473465021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.21740964820775	6.98566717218375
Merged-chr11-114898244-4	41.5645690694096	0	1.28202716463982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122310405-4	18.3981446946062	0	1.27899077299622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102827118-1	2.36996093182771	0	1.47226202284896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19877250-1	12.7242273887902	0	1.28689912237946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134762568-4	21.9834313815917	0	1.27943871926711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150311403-4	40.7573766844147	0	1.2822727334212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45126184-2	4.55117797342678	0	1.38463778372213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33095594-2	4.14565762545965	0	1.38897276664643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105777919-4	19.74304377001	0	1.28711367987049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41346651-4	17.369804632185	0	1.2860732418133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150064399-4	20.0256469375894	0	1.28406814077572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70342396-3	13.3083943135759	0.420131577152458	0.543457827713559	0.773071167122644	0.439480263802878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83601133810491	3.07512165512684
Merged-chr19-4300466-4	38.8474835424995	0	1.2765888187338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92867421-4	62.9990959127261	0	1.27512995270792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73180849-4	15.4556015877262	0	1.28581610643387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93084519-9	79.6269214502245	0.429098861947293	0.227336080176453	1.88750884423729	0.059091917908704	0.419081882750398	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66066042540519	6.14779021486254
Merged-chr5-123884607-4	21.720411726185	0	1.2851224011105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50504564-12	69.4398836528547	0.0103051888983895	0.253883900001694	0.0405901630561085	0.96762262643923	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57116532947085	5.58892994402259
Merged-chr1-37491896-4	43.0370846163473	0	1.27666994339612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165621911-2	7.27443771043091	0	1.32741582228521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90509443-4	18.3884680060969	0	1.2838872125998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74018421-4	31.308851386706	0	1.27496132993219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34314211-4	11.2929447662875	0	1.29993599236688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20313671-5	24.6152020131398	0	1.27428594318097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61643883-4	10.5393187064315	0	1.2865291948332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66015161-4	12.9163598110383	0	1.2823541738806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94378473-4	37.6520623634461	0	1.27614052801013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90516122-4	35.6745777238194	0	1.28221557546163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105595412-1	4.81400116968233	0	1.31279676043649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80609850-4	20.6738335915993	0	1.28593810384688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79750409-4	37.6635517479294	0	1.27970172208318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37769463-4	71.4572363978108	0	1.27554514012883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101827127-2	14.0456537213828	0	1.33495624499931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167765391-4	44.4792560915491	0	1.27766282700096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69186466-4	11.9739157119327	0	1.28257597459918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8842435-4	13.2290514771092	0	1.30787822111839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123566887-2	2.80881128996327	0	1.43766901571422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84004027-4	24.3301381151489	0	1.27987491858394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55208446-4	25.3859968574816	0	1.28679934010625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5649707-8	66.1270952583615	0.0814685742971791	0.225763783795553	0.36085758719811	0.718205910733713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74384552122285	5.80840650902116
Merged-chrX-36758720-4	19.3525677859623	0	1.28381067708224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101594490-4	33.8418497442756	0	1.27571538840914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127137264-4	13.0737418357235	0	1.28251286128852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45529734-4	14.0037801726944	0	1.29453344650113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41402766-4	28.1492302058552	0	1.28027804006959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72851950-4	17.8250578965223	0	1.28880852325066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22058729-8	157.15232925453	-0.00357553377880901	0.196079806964548	-0.0182350943432716	0.985451306048571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.85340535857722	6.85069736682463
Merged-chr11-86624481-4	26.3381796169367	0	1.28644017216936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39230860-4	44.0807788437778	0	1.27876567987584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21024717-4	18.2270519544739	0	1.28373130783317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144716066-4	14.6922987211697	0	1.28724265351753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62574733-4	33.7358174798999	0	1.27565132795006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111096831-8	57.3464847956579	0.0606267756659087	0.237263158454911	0.255525451404753	0.798317288521472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33730661850297	5.37896782671077
Merged-chr3-105910677-4	17.228601997664	0	1.28140093467534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171554132-2	5.89798757369236	0	1.4023321879098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121427438-2	4.19559056062816	0	1.33780624009096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172643843-6	59.3402664430301	-1.0560575085357	0.359762061361924	-2.93543322644378	0.0033308229079424	0.0480052831368337	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96278545823669	3.88182634999943
Merged-chr6-133960150-1	3.8455283163719	-1.30125984681125	0.830946992039856	-1.56599621790175	0.117349502580343	0.698835377345766	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33957116260875	1.52525172700064
Merged-chr6-129232460-2	4.26010701046548	0	1.37225010258366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184659743-2	3.16236022742263	0	2.25596904606282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39412973-4	26.150328023949	0	1.28182918200033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115463126-4	24.1187120331836	0	1.28238170091046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115641384-4	73.0741423411283	0	1.28112100570816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23921684-2	2.83301010502521	0	1.46941456793396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49858766-5	53.0331225581211	0	1.28158013592883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176828191-8	43.2086121516659	0.0990258217233163	0.22498945915421	0.440135382766722	0.659839056597264	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39703574460843	5.47083410118651
Merged-chr18-35730481-4	28.4801198287796	0	1.27899405053123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5573227-4	49.3052126377677	0	1.28213565620221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71094059-4	19.1778126590727	0	1.28329279101095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147742695-4	20.3156809349674	0	1.28147521418345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12956213-2	4.92488359030126	0	1.35246385194609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145740910-4	83.1553505165754	0	1.27684041072052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126739648-4	16.8447534766619	0	1.28175004427914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-56089713-2	9.2283548889156	0	1.30846837299124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5789592-1	2.24272930371666	0	1.5619967113414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-10331941-4	16.9213715614158	0	1.28123065649344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-5277162-4	19.8840467997673	0	1.27959199785507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137898521-4	24.3700734836437	0	1.28224381221883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91748424-4	57.4118546606596	0	1.27723658043956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184261411-1	2.83094749956129	0	1.4364021311782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74241048-1	3.65131441631477	0	1.33466369531968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139666686-4	17.6823773800845	0.963487034913571	0.585029273886231	1.64690397202403	0.0995777853553065	0.618654683573669	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59885153687392	2.8441881967244
Merged-chr4-128720269-4	32.6630378901974	0	1.27731172076286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101600444-4	25.236484135242	0	1.28163324014237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28383152-4	107.651366498002	0	1.28114072130973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86381198-4	13.6013237167263	0	1.28302460209476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10383280-1	8.79523631098371	0	1.2918092112523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10546809-2	5.27961022078252	0	1.39456267264784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17643121-1	3.4321556767904	0	1.44480696842372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107100478-4	13.7176557905838	0	1.28778975788883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61621590-3	11.0407174649386	0.83904750400929	0.738456952628874	1.13621721756741	0.255865666418292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44073022839725	2.0509200531463
Merged-chr9-99212850-4	36.3150851836849	0	1.27701900032586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9859180-4	23.9734254673638	0	1.27746687739246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69593350-4	22.2778514238265	0	1.27973197787679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38758683-4	31.4108007557706	0	1.27869056342904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35595349-1	2.02010486627959	0	1.89512183886016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112867502-4	21.7069293912322	0	1.30312258383153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47347228-4	17.8784748148253	0	1.27749933574828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34865760-1	6.3816184532922	1.21040122708249	0.708688356740234	1.70794569371789	0.087646419550457	0.560844392082272	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47663207055949	2.41684433297733
Merged-chr17-44027443-4	24.9218330689684	0.302202674716171	0.223909442907468	1.34966471619983	0.177123555079273	0.933186795953415	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75361161683582	6.0591051092334
Merged-chr3-127769334-8	166.862029113348	0.0530438350803758	0.150653570245642	0.352091457201362	0.724769674881493	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.68368252508965	7.73240688241987
Merged-chr11-21048891-4	14.131123891609	0	1.2922860974636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96332984-4	51.2230104946418	0	1.27928543208526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114295737-4	14.4548933099602	0	1.2907594108398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117041621-4	21.7449898847922	0	1.27937275706936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120866033-1	2.028231633994	0	1.52817968651151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101246448-8	219.953973643282	0.411153256120133	0.177453779862549	2.31695969755393	0.0205059272958285	0.19093478556187	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.65402776760378	8.06120238025169
Merged-chr9-119248187-4	13.2999531971792	0	1.29036655599684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4409296-4	12.8109004251555	0	1.28782522511302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90187674-4	19.1946799002275	0	1.28617065104844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113628315-2	3.33287639866262	0	1.36676003244748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29436817-2	4.77218853953111	0	1.38609320288893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133495647-4	21.9919489012301	0	1.29395853186945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124125753-4	23.1656888378039	0	1.27734497261251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135746318-4	51.2050270306523	0	1.27690080039298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123427769-4	26.4391333290188	0	1.27526819819252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120150399-4	39.4345993677915	0	1.27664206126892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31158602-1	2.21322991791476	0	1.4621742124387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48453799-4	12.9095961303215	0	1.28361242326435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73915069-6	120.085755015353	0.093571862955178	0.17470019507461	0.535613958045186	0.592225380018177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.15466172543456	7.25001481834748
Merged-chr18-43509145-4	45.3141627090541	0	1.28072722624459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143055775-4	24.9725562939986	0	1.27739532469614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93688469-8	75.3510471441537	-0.50400623542678	0.201208971081985	-2.50488948239498	0.0122489660637075	0.129476049239571	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.75423689617014	6.2223568708141
Merged-chr18-89181802-4	24.5829372068576	0	1.28101637534661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68407469-4	20.3536382481649	0	1.28449197256068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-88828508-4	35.6233225676078	0	1.30091991120734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36636947-4	27.2778109081265	0	1.27757217679448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12176786-4	11.5823083239945	2.46053644306284	1.16256197187919	2.11647766104509	0.0343042031625195	0.283071405462558	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr15-83009192-4	21.1125691818291	-0.417658868922718	0.494290750289404	-0.844965981415152	0.398129832936324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30315773080689	2.36453465698696
Merged-chrX-61680159-4	22.2374739173988	0	1.28653425991547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30693409-4	15.6876508671472	0	1.28198190326741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52797540-2	5.91235314707232	0	1.36986876067307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96911769-8	75.627664942993	0.145999129610912	0.251618463030153	0.58024012964985	0.56175269527115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42886483662414	5.6038770434102
Merged-chr1-128722222-4	70.8551136765228	0	1.27973417371314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39737662-4	23.5627902903564	0	1.27961183858013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8667462-4	28.9034247286142	0	1.28176744461474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117859136-4	19.9875451200385	0	1.28392692658734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95749334-3	9.70294070443385	0	1.31624871779767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68188046-1	5.24560373320845	-2.75554676633511	1.02309065469323	-2.69335542622207	0.00707368161351477	0.0846662698265352	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89515285721696	0.73596151290311
Merged-chr2-116963294-2	3.01523665331856	0	1.53468073374143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88827716-2	6.97152592149242	0	1.34265620424391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53434063-2	8.40896321266958	1.98735273716344	1.52962803183203	1.29923922405056	0.193861844335344	0.995684671849199	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr11-85521156-4	28.3706013591349	0	1.27853265397577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10429232-3	15.9563269453577	0	1.27996197013763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-18234122-4	48.9353637112291	0	1.27486841095719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171619226-8	101.511739435246	0.138784346602917	0.173828152986166	0.798399708095396	0.424638572622259	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.74931527883398	6.87941803878254
Merged-chr9-13701947-4	18.4405965398985	0	1.28645446393229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138982439-4	17.0548032234583	0	1.27970588160385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66662159-4	18.3603611823977	-0.508179097069115	0.457872608589324	-1.10987005454373	0.267055026142194	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56113947640604	2.58303346135974
Merged-chr13-44771049-2	4.81199605442898	0	1.41842169506199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8452361-4	66.1033355729987	0	1.27792227342302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136148059-1	18.760600496847	0	1.28235773846501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102498957-4	19.7560437454213	0	1.28140570041183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59221723-2	8.8883517524791	3.25734019400366	1.04529730492938	3.11618539399536	0.00183207052231126	0.0303391992779908	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.69733277475078
Merged-chr11-118236743-4	24.8214247920993	0	1.28413511177861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36530785-4	17.9927980770945	0	1.28129761672687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169123317-4	23.1052005704894	0	1.28056771129471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67712797-4	9.79629717131241	0	1.28946738174217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35716672-5	64.933672775158	-5.29821428737193	0.885740958707054	-5.9816747044259	2.20855003663365e-09	4.87567265857643e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46109245563992	0.469435083901436
Merged-chr13-42829156-4	57.3076302657298	0	1.27709729918736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29624487-4	12.829500236491	0	1.28614117042679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118691096-4	21.6213358043863	0	1.28069361172523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58275334-4	62.5952628175439	0	1.28126948032886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70968528-4	19.7561031048098	0	1.27991733171983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23136031-4	26.2190721138225	0	1.27896617492866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95888857-4	15.0364698078722	0	1.28605545343619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94993678-1	2.56814033175382	2.39184621076596	1.51553183046714	1.57822235249833	0.114514536845601	0.685827781570221	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr15-84996060-4	24.8516179999698	0	1.28076306839145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-18319616-4	25.9206185398419	0	1.28144989234104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77874995-4	18.848014182135	0	1.27939781423754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126231922-2	3.00149891677841	0	2.00946689398562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51805402-4	11.491816386357	0	1.28677223657888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110426992-2	21.1893631054873	0	1.27780999923946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61648861-4	28.6564437288437	0	1.28372263491273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-8786-1	2.46947514703676	0	1.97878538729343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-15598-3	209.385887970023	0	1.36085910095357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112308889-2	4.30704864601756	0	1.39046984663251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156615782-8	86.9813209441023	-0.400930726444663	0.197332502297975	-2.03175210254645	0.0421787583521327	0.328198754855735	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.57017267679575	6.15345991300467
Merged-chr17-26535550-8	218.268989473876	0.239960737924083	0.171120236960275	1.4022931605675	0.160827721945665	0.871301199391451	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.2450238578011	7.48193681452393
Merged-chr18-5397530-2	5.00432701073723	0	1.39692750384147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90146528-4	16.0635295375378	0	1.28551867139268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71981598-4	29.3891377919046	0	1.28308021964493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85113695-4	9.42107944891083	0	1.28913105221057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139294342-4	14.6356286344955	0	1.31308958377828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91385760-4	19.7833963837096	0	1.27883033024886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36938804-3	18.1413555128536	0	1.27734719491829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14640367-4	14.9310932396494	0	1.28405892028281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123327156-1	2.09322144812078	0	1.61768878687557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127478431-3	25.0394884986721	0	1.2859091196968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81298887-4	47.4338327279339	0	1.27609988156708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79168143-2	2.90597221865424	0	1.47776274900007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46432839-1	2.5784121938913	0	1.42770480050853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5510329-2	3.96699889667737	0	1.60570330417365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37703395-4	20.5387394165688	0	1.28209768550106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50097981-1	1.86876854067276	0	1.64401527577661	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29488616-4	29.0980696982843	0	1.27692932550665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83482626-4	22.6947254065017	0	1.27938296007528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-74233963-2	4.8987692347247	0.937805613341093	1.10104398081507	0.851742191666917	0.394357197662934	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.709714069046076	1.04220233489076
Merged-chr18-68059195-4	24.0554214329179	0	1.27777361911899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24859985-4	18.7027010254383	0	1.28163122580666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21642248-4	130.543355045272	0	1.27798909933035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14106579-2	3.08523267038519	0	2.12209105175894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56795477-4	20.605236732563	0	1.27690799429761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58744961-4	30.0359430265094	0	1.28293916384275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45150512-2	8.33721191467699	0	1.29234808251285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25275231-4	16.5886947974692	0	1.30341147447989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58829307-4	16.0098452534485	0	1.28774968610056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-13975-1	3.34885152086006	0	1.81278931525265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164071892-1	3.13239043020349	0	1.43144512913599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107269813-4	20.4581720046409	0	1.27909976959458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117719145-4	29.5176081940455	0	1.28591367202732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91766915-1	10.8728655210479	0	1.29225825762142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37339792-4	18.9169639111428	0	1.29888862600714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92878804-4	41.6244269702901	0	1.27545183556469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65730131-4	26.7732849984818	0	1.27581161704616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121316807-2	12.2084463055286	0	1.29122623089689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108831778-4	20.9242600924747	0	1.27697971175845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59292735-4	12.1176111861327	0	1.28994463265367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8705302-1	1.86822766840774	0	1.49313771639293	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160269502-4	14.2127216630317	0	1.29019257785622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138596352-2	9.78412512808682	0	1.34545450501613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134420302-4	41.8686122375181	0	1.27791103306415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-661-3	308.25911576077	0	1.33256983617321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167802773-4	28.7473977590686	0	1.29467513451515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40525954-4	14.8642675326497	0	1.29675751609549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64452961-4	18.3859370784295	0	1.27953150245139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5714361-4	26.6068763306567	0	1.28092029394692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19894779-4	26.3687742673018	0	1.28199168090457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40196180-4	12.1795408851371	0	1.28111351341035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56699235-4	22.10488500902	0	1.28399394708149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51597416-4	18.9711318150384	0	1.28272615936944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103017536-4	28.6219022749404	0	1.2749766500934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75032366-4	24.0597701427697	0	1.28247569666442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28540092-4	84.9251492512812	0	1.27739213594546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-43918351-4	12.092047455039	0	1.29234556487319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140890887-2	3.23443448757986	0	1.41229280453128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43331297-2	5.59683446849844	0	1.33925095679621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59431150-2	3.37666952324396	0	1.45491427465359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41386061-4	18.3864475752142	0	1.27975535113731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74387061-4	53.5577752107435	0	1.28011574230159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113114348-2	4.72444817078717	0	1.33423099427012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-11178935-2	8.23541878383855	-0.232096409199662	0.586166619080753	-0.395956374253524	0.692137211814977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84713918289868	2.30923017122179
Merged-chr2-174432697-2	4.2473017798863	0	1.35447144915139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75085059-4	19.7532659900981	2.45764771964113	1.16119434709616	2.1164826764676	0.0343037770355127	0.283071405462558	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-20966277-4	8.97560532824771	0	1.28934582314759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140207248-4	29.7852637517275	0	1.27713198845586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145942136-4	13.7777485675943	0	1.27993026798345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58018108-1	3.48744429445476	0	1.52685719447291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22166203-4	14.1633503959279	0	1.2871476452909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11034573-4	32.0086802884884	0	1.27745504686637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53188821-4	15.9299649835367	0	1.28036892827756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76251947-4	17.0202508983567	0	1.2776903200319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136143659-2	3.03471249821854	0	1.88739429119312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-5395-3	229.96471305527	0	1.50871092963395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90109617-4	23.8671370298527	0	1.29881931911611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95306571-1	3.7017524522277	0	1.40415375058238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21161372-2	7.10384741944318	0	1.30633604598559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41345156-4	17.5330762555374	0	1.28487634820315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113614097-4	32.88743322088	0	1.27916830418642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57096281-4	29.8575339587209	0	1.28686876089275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83867192-6	37.2807486426145	0	1.27913636075921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57619650-4	14.9838335533418	0	1.28448165432844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72601935-4	11.2278877895457	0	1.28217100544412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84240374-4	10.7120557261946	0	1.28231166289812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121585579-4	64.0159655079256	0	1.27869726222185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8691433-4	29.2994466127908	0	1.27865808757113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87408087-4	17.3433118966461	0	1.29055839752273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62661741-4	22.9859470570811	0	1.27981949140027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38372224-4	42.0378420751581	0	1.28251006903791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29850388-2	3.88050053392967	0	1.4219206067909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68242249-4	20.6936793613111	0	1.2797812144599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120479455-4	51.2374055822403	0	1.27632112763027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81849460-8	73.1008889497887	-0.11070266701113	0.249605630321179	-0.443510296096622	0.657396673605547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31048925614264	5.16495829654833
Merged-chr1-150151558-2	6.17715731651433	0	1.37722645710403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64082439-1	2.8790545952801	0	1.40533289599682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62152348-4	33.9234772537914	0	1.27517111193454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119062245-4	23.3225838147746	0	1.2843763034804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-17378-1	1.30954067404017	0	2.43325318638209	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111413513-4	11.6555166856234	0	1.29189779854409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99287388-4	16.2660694626409	0	1.28163110252084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194995403-4	56.6528919780729	0	1.27628844444257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128506091-4	21.4442451984377	0	1.28212101695752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54369421-4	25.9892211024381	0	1.28702470386947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61668163-1	2.41438224862614	0	1.35790236487227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84764886-2	7.75496064646706	0	1.33978583668155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48454312-4	31.5268756006847	0	1.27632528718753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95822248-4	66.197086180402	0	1.27583007694435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113945369-4	34.8237770874589	0	1.28124947629375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113820355-8	85.9232118139423	0.38964339519448	0.238787527253514	1.63175773741652	0.102730531645386	0.63420210872928	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81294049904603	6.12593810472769
Merged-chr4-123425819-4	15.8798086563312	0	1.28198362114849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25302046-4	23.4551748294008	0	1.28311268763955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21224624-4	26.4594147053126	0	1.28579865343921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-4816963-4	13.7003084674063	0	1.2901783297564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58266627-4	35.7416167725804	0	1.27738988117516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-104949079-1	1.70534072358754	0	1.45888925388278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29861705-4	19.8557737312327	0	1.27914920481232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32364502-4	18.2360157865134	0	1.28597435794308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17479105-1	2.13821808586304	0	1.43896718176597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134629720-1	3.04315160266602	0	1.34095930741572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17714640-4	20.8029546128831	0	1.29673885463847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67345347-4	54.0666989055053	0	1.27771323235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46474926-4	37.7336261461131	0	1.27671355273363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34572755-1	1.84592438878192	0	1.58132778316676	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81703336-7	30.578114161075	0	1.28034230681543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-85005742-4	12.5493146675407	0	1.28952493218718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44632143-1	2.78683576897275	0	1.43053285972708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90232905-2	4.34361358659992	0	1.33997819891923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66852217-4	20.3270426864801	0	1.28923014582907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51404844-1	2.66394490127377	0	1.5706822307974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44963030-4	41.1118503902207	0	1.27364991679696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66856769-4	23.5137406344009	0	1.28662443783836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104501037-2	2.47684063385319	0	1.5140817541531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6575911-2	4.47340871594563	0	1.34315747678758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-89160025-4	15.625284062094	0	1.2870305422941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9033979-8	92.1032482430726	0.652101047014091	0.252829349065626	2.57921419892129	0.00990253625835937	0.110086957185905	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61511631310245	6.23004606626889
Merged-chr9-83568277-8	65.2631492646138	-0.685629561738479	0.207768560665165	-3.29996780813929	0.000966959196057345	0.018568003416269	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38006099573104	5.66682258249789
Merged-chr3-54709185-4	24.0356147268842	0	1.27654781417945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57906881-4	58.445131565436	0	1.27483314858171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95657396-4	43.0870572498805	0	1.27545270640674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17584132-4	16.2450203268719	0	1.28931798039923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80419510-2	5.53030024218391	0	1.37498734110498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94802520-4	18.7682309280308	0	1.2852421240605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111547335-2	2.82749491852043	0	1.56193754139096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86614342-4	31.3418584093466	0	1.28470797600549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116494816-4	50.4566478264971	0	1.27744890103963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151689741-4	19.7893293650437	0	1.28484857413391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21609748-4	36.641442295689	0	1.27580147526243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151057207-4	34.9992125728296	0	1.27854659869091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11429743-4	86.5242763380043	0	1.28054923865102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58516859-4	18.5541922057145	0	1.27924759637679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77858603-4	25.9668369766705	0	1.29402925986754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85391271-4	15.4723963999064	0	1.29344544062204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122281387-4	12.6475505311517	0	1.29032335410319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71625252-4	22.024922376047	0	1.27949340388242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91417143-2	4.3172624448236	0	1.37102347060139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39966807-1	2.16266029736012	0	1.45764386657935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98609632-4	14.0423370984608	0	1.29213969092657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115823681-1	5.00255873699187	3.15747979979162	1.14830450957385	2.74968858300782	0.00596519267569617	0.0744322093920263	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.13115973951627
Merged-chr13-52031644-4	21.1343091320441	0	1.27759156216072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31061037-4	18.7080321343978	0	1.28125162857682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59455690-4	31.8017757365457	0	1.2765387220997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100632948-4	22.6107999660549	2.45952795982667	1.16912239730817	2.10373863804985	0.0354012520558021	0.289709482384276	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr2-11332633-4	27.0851008414447	0	1.27807384487399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108758100-4	55.7619181022936	0	1.28088248559938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43757367-4	19.7330689074175	0	1.28257981463323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106558451-4	16.1090643351068	0	1.28224593989317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164135513-4	28.4179597364675	0	1.28354239381951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102979318-4	15.9015211714596	2.7395977226003	0.950151903637937	2.88332603672207	0.0039349992720332	0.0544549899259385	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.08307023099066
Merged-chr13-5779601-4	20.9318597704068	0	1.28204822985215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37561721-4	14.4228380228099	0	1.28123004082449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120762970-4	28.1365314503475	0	1.27567176975529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96716021-1	1.88250923213335	0	1.50111834837225	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70680112-4	29.9716137103395	0	1.28109833130923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120760394-1	2.13264779026878	0	1.39896623057187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3648520-4	14.9514940169328	0	1.28637865832523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54920281-4	16.1244710941415	0	1.28863344682838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46434093-4	18.2747403341034	0	1.27972542039479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136123579-4	23.1882479945975	0	1.28884763122163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127254147-4	39.8701141835837	0	1.27580980484189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118145947-4	68.7142015142289	0	1.28041211814117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95898152-4	32.7257892321792	0	1.29691354826135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35728437-4	31.355125104858	-3.13301119813992	0.51485566699147	-6.08522232346688	1.16329773519867e-09	2.89897291790684e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05955966529805	2.45448509329049
Merged-chr14-19985291-4	34.0593289347014	0	1.28276521407122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183345497-4	40.8565945511183	0	1.27646319639129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87640492-4	31.1197302844918	0	1.2813929596408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67071598-1	3.16570178217232	0	1.34905571544946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98880923-4	35.9998922818058	0	1.27535691763728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58183863-4	20.3779549954055	0	1.28323999972318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55846358-4	16.5617978388047	0	1.2958241332117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96670024-4	32.5197661653924	0	1.27805095871766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84100789-4	16.2218212965757	0	1.27802154779999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155487951-4	10.5417980060078	0	1.29079376732714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29000661-4	14.0984380336267	0	1.29623765167789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88666548-4	27.0907329526323	0	1.27689240810825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132474784-4	17.0752629548681	0	1.28677950416526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80524450-4	22.9004246060333	0	1.27844306411132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24353294-2	6.01539184185117	0	1.34654226479566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74563955-4	17.3877061053316	0	1.28430350301721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79780881-7	30.6262591385482	0	1.2821871849474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131976742-4	51.7459845592359	0	1.27367831613655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44757891-4	13.4699859744516	0	1.28202531385441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45300659-4	46.0392388171251	0	1.28029813619947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78428370-4	19.297839120688	0	1.28217675935868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31090178-4	19.6098889365307	0	1.28612880170023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161500933-4	19.4645679428134	0	1.27779527022492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5945928-2	7.28704560205716	0	1.30546407531428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33202350-4	22.0805486636363	0	1.27654222665447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33211562-4	28.7592814171975	0	1.27577568206853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132103537-4	23.2698389071386	0	1.28556335892318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57113073-4	40.5525561609809	0	1.27917024859049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112160343-4	20.8395285593945	0	1.28703758832845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92368506-5	20.7650224915356	0	1.28184623165308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96333479-4	31.2655912941896	0	1.28014746456563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3723461-4	32.0336410665538	0	1.29819055520945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121226306-4	12.7182613125325	0	1.28887452025552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52998154-4	56.7328576352403	0	1.28633758415673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33347272-4	17.9260210154636	0	1.28116224810235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103680497-1	3.37780415436228	0	1.35840659212808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61302412-1	2.16434267418169	0	1.40451046670354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95161443-4	49.0179774010141	0	1.27628164851443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119928435-4	17.5855400602834	0	1.27967168899398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122906594-4	19.564822636846	0	1.27841794925471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25412047-2	5.86412694312106	0	1.3204645899621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105431765-4	21.9119747501569	0	1.28314703437989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-19200-1	4.80364726972808	0	2.43325209634769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130807052-3	25.4910683662378	0	1.29164384367163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35902523-4	35.3788513368236	0	1.27816419083256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8195830-4	21.2625094244313	0	1.29152716370861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23380233-4	34.349449756155	0	1.27528823551856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67242165-4	19.7842094271847	0	1.28128569537353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121326836-4	26.1734362740454	-0.0948920035567165	0.411158953531144	-0.230791529022434	0.817476762460814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02401965242708	5.76630997908674
Merged-chr1-23433822-4	42.0151098030479	0	1.27739973605818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78350951-2	10.3953888919323	0	2.41509556994244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27617158-4	38.318132124299	0	1.27409167892802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129586247-8	89.1629627443901	0.239715078525265	0.212668462418874	1.12717737175868	0.259667495687645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16607987199421	6.37515698279265
Merged-chr9-96392157-4	59.1037240509898	0	1.27704660660714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47768808-8	58.652224374014	0.196674128994141	0.23315892305437	0.843519632093511	0.398937890756335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28233348197985	5.45495081932089
Merged-chr11-117138345-2	10.3695267924993	0	1.29713405648221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25745193-4	15.6983703198189	0	1.28193045235746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27327170-4	15.2872980409019	0	1.28506399866325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24034293-8	64.8062163520045	-0.657573652120313	0.277675981459476	-2.36813298962366	0.0178781082423895	0.171727599765865	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27709596954177	5.68728649012589
Merged-chr8-11767669-4	17.3877475960048	0	1.27914884912232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105455445-4	15.5584964534975	0	1.27797112778663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99345438-4	28.0747124589447	0	1.27883180082172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21183039-4	36.1603848855879	0	1.27939708961602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25124243-1	3.15308240175744	0	1.40666895214955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46231355-1	1.99889241073984	0	1.98584850399353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75796821-1	3.54870732119041	-0.859019210276718	1.28478634735291	-0.668608607218304	0.503745180574932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0
Merged-chr13-41596528-1	4.48236162188269	0	1.36525148339857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32565319-4	56.5948632485181	0	1.27430287398922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89413762-4	19.1351397856711	0	1.29449283438475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20017724-4	26.4596800271034	0	1.27996912075705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88573505-4	63.2019468909296	0	1.27582037034719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124805354-3	11.8841017449719	0	1.28308283245712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34199691-4	22.3443149141059	0	1.27898933500469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72219784-4	59.0604705848175	0	1.28113058193941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42005791-4	21.8390582490901	0	1.2793851156626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76151933-1	7.33567976616347	-4.15281309465237	1.04620768325587	-3.96939647941462	7.20549023778295e-05	0.00244979170175944	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89877858425663	0
Merged-chr16-92897112-2	4.92196077314555	0	1.35648746364164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117952665-2	4.88030585352341	0	1.34210026576379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58301929-8	63.8276643393343	0.477477508804496	0.181723580129305	2.62749340765105	0.00860165085224916	0.0986803856374778	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1492686211964	6.62963515849042
Merged-chr4-119966858-8	125.66047927957	0.0976656445869769	0.249552869321932	0.391362539137887	0.69552927800997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97870708126008	6.05705256177411
Merged-chr18-62169506-3	20.685813221519	0	1.28104061323513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8627312-4	16.862781861807	0	1.27964157603769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125619720-2	3.48871879805919	0	1.38762236349048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38367424-4	21.7609561192716	0	1.28194845260417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43399621-2	7.43607268659449	0	1.35819527153621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30620427-4	33.8111014969587	0	1.27831789224355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137881178-4	13.2869285317628	0	1.28616222768953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32194614-1	2.08594184836817	0	1.47596694238062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118612435-4	28.7513496522841	0	1.27894096101209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17550836-4	22.5664460880417	0	1.28949116288292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103478169-4	22.5120774401735	0	1.28370826358102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68939788-8	48.4372453741294	0.368914886981012	0.260544505713904	1.41593807925509	0.156793634674885	0.855530799220529	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20376746359683	5.54347762689686
Merged-chr18-39653008-4	20.1758052335086	0	1.29143629744058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38384903-4	93.4859582642224	0	1.27749843080631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67025721-4	33.8546620827547	0	1.27660851771969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24629969-2	7.85530894321188	0	1.29325252529782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104973645-4	18.1151151419237	0	1.27878622745173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20468857-4	22.4024120451518	0	1.2768310112762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129803599-8	76.354331052508	0.565576895734162	0.200923641167145	2.81488476143864	0.0048794727715977	0.0639114106499947	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22918223358697	6.79830422002919
Merged-chr18-46434638-4	12.1322518280222	0	1.30283203955165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120517710-4	79.5543807614348	0	1.27682414570403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58720233-4	31.3135393926317	0	1.28225434656538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32132053-4	14.8721214135561	0	1.28685487781375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148902518-2	12.7465599089432	0	1.28932448757214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66391802-4	18.5384249880181	0	1.2794921013926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24564733-2	8.28917052160153	0	1.33357581814391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3198550-4	30.1993623271895	0	1.28743807017928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40585784-6	20.2144677544719	0	1.27895556792471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55664087-4	23.8228802480712	0	1.28868704338666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129746943-1	2.09055244443359	0	1.45622414993336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117201694-1	5.66564924109617	0	1.32566391583095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135314615-4	22.8220768545489	0	1.28298016350667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134532597-4	47.2421538873726	0	1.27434359958061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88960220-4	17.1199478301873	0	1.31791295468677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-133986016-1	4.56212420732525	-0.635282927138717	0.913527128195997	-0.695417692075826	0.48679357626133	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01127624368839	1.92797716160218
Merged-chr11-3172038-1	3.89789849958399	0	1.36028108320252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116990339-4	32.0807016963006	0	1.28244378568331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55354244-4	44.7507175897002	0	1.27632789539682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3154253-3	18.0099866637583	0	1.2831466513126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90828914-1	2.76796316481662	0	1.41635549316994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75853762-4	26.9654269423329	0	1.28175685600784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180403336-1	9.20690377577734	0	1.28583265658942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62183239-4	11.620781326965	0	1.28187790570229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51089066-4	13.1736315771873	0	1.28233620036148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79354816-4	33.1422622710351	0	1.28302867162098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57363170-4	9.64685311488472	0	1.28863927074808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45038847-3	15.4010537911931	-2.33325222947408	0.70008428089999	-3.33281619532234	0.000859717184145654	0.0169010466652172	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58896899205314	1.15307255889252
Merged-chr5-140795433-2	5.70545664164251	0	1.3023337526182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34046534-8	130.335288328885	0.355896034399336	0.174086488377708	2.04436333753349	0.0409176663763667	0.321462341791557	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.73797081201877	7.08953534735187
Merged-chr6-98978004-2	4.13165059315312	0	1.87039739485625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122740290-2	2.59895471108484	0	1.4105045768916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36772724-2	2.8832929261705	0	1.42297189944258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45961981-4	27.1042034184333	0	1.27770914476981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10962228-4	15.1151757180541	0	1.28967243792336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116424227-8	72.3445105147613	-0.365174214753075	0.212814829144963	-1.71592466662335	0.08617583138558	0.554420190777012	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96770505436179	5.57465509770596
Merged-chr3-75299644-4	22.0464566361933	0	1.28322966348548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159638687-4	24.5961328045187	0	1.27726105590993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125581445-4	25.2442884968652	0	1.28824561079062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17743832-4	21.4348600123701	0	1.27887998181181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68717622-2	5.5620107851458	0	1.38231668370995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86417157-4	27.7390844906863	0	1.27704297485003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19257529-4	16.0011555857678	0	1.2810661616609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95508980-4	31.2134947939202	0	1.27794117313752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38025496-8	83.7498717360805	-0.251552438168075	0.191101632240737	-1.31632804606915	0.188063961407464	0.974871301136931	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.49602813918863	6.19623871573295
Merged-chr10-21605199-8	78.4240150091087	0.941819844652362	0.192895416586337	4.88254133415771	1.04727277226942e-06	8.32543632320166e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06264870991966	6.99768756673409
Merged-chr19-9445504-1	1.64565149944882	0.696381479120764	1.6998628239898	0.40966922112354	0.682048611247208	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.420961122473315
Merged-chr19-55857566-1	2.13009071441917	0	1.57417097304215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28762117-4	9.45603397581759	0	1.28777414346746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13660448-4	25.0443041293156	0	1.27547808294388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7340894-1	2.49201729288175	0	1.55041327808284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12780195-1	3.96259274847855	0	1.32668496004076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53130930-4	23.6426892157104	0	1.27989815113154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140108097-4	25.3311810942377	0	1.2804222951645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37658223-4	17.8749480041203	3.56902248798115	1.01822206769951	3.50515138219772	0.000456347721697745	0.0102829304214003	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.73775798795819
Merged-chr16-14351747-2	4.96041730965458	-0.881176060334179	1.19643879604982	-0.73649906977564	0.461427033471996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.899323202389902	0.306240821987646
Merged-chr9-65569645-4	37.5496763287685	0	1.27405690865555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154046134-2	3.25551747916805	0	1.85896107591545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79572627-4	41.5306975508378	0	1.27462020486138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103616954-4	29.6014317197156	0	1.27880937590897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-28420863-1	2.36446781466729	0	1.36784472910974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135711255-2	3.06002002235363	0	1.43391571586772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104937444-5	37.8819454980262	0	1.28007531647914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95519085-4	16.7942850449658	0	1.28145461512856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186444991-2	4.28828815306734	0	1.32319341418932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46267469-1	1.81432643147151	0	1.53207766421809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28420029-4	19.7024560748121	0	1.27684689793562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109863606-4	17.5475458587073	0	1.28091608192688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41467316-4	24.6835961841669	0	1.27632179802233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57541140-4	27.1714990904241	0	1.27815198574818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83748789-8	135.79538684928	1.32302867652392	0.194696157181889	6.79535074381521	1.08049329413109e-11	5.43122421525311e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10356116623953	7.43225837982541
Merged-chr10-60257556-3	36.6243211934405	0	1.27938133240605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167754058-4	82.1335550715232	0	1.28084303479762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49417214-4	37.2666429252224	0	1.27769556332408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23557401-4	27.7555409873794	0	1.27655902154204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105717025-4	29.1693998376246	0	1.27665864027196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88131475-4	17.6715373480395	0	1.28890222050271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48813856-4	15.7185600315284	0	1.28031298701018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117476049-4	18.8485017820499	0	1.27694760533535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14842374-4	18.5033574676071	0	1.28382215692088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61199789-4	26.4943360765687	0	1.2899242834147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45685473-8	81.114548837366	0.286256741874889	0.218563786900028	1.3097171582492	0.190291536849841	0.982832023947972	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.44411950564909	6.67041942676541
Merged-chr1-67477329-1	2.66522623587637	0	1.38095432696495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35813898-5	25.3370825154325	-3.68430895893059	0.652223829728168	-5.648841380828	1.61532813033966e-08	2.68588376603499e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04696494888722	1.29606516661881
Merged-chr14-57366924-4	14.7066417139107	0	1.28460257314344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19964331-2	3.29292312404126	0	1.41446900530471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106739698-1	2.87790495112853	0	1.37709749625572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77451578-4	21.9565091060878	0	1.28158063621165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94634237-4	14.1554371515454	0	1.297900732562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-51737-1	3.70900444318516	0	1.73622255361125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45522033-4	34.8943496448737	0	1.27830437858579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191250222-8	98.4460690309075	-0.368841925784826	0.183850973753186	-2.00620055610901	0.0448348545743448	0.342944914785805	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71834043124687	6.35798093849888
Merged-chr14-63103225-4	41.7235188981163	0	1.27620361446451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63389923-4	37.182011063003	0	1.27547422890386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54949211-2	6.44225825041351	0	1.31506169607234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-38820243-4	18.3846206443987	0	1.28073194689972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48419218-4	18.42712340871	0	1.28800724620502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56265132-4	12.9238700455881	0	1.29576296797451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3535505-4	22.5572211850914	0	1.28138830855224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44378055-4	31.2488634090151	0	1.28389637176305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122892374-4	18.6559688838405	0	1.28414380453482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165043226-4	21.497687799004	0	1.28978296316538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133583814-4	14.9975309558961	0	1.2908090961662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100024889-2	4.74892090362354	0	1.75663418114136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62349677-4	23.7203491875995	0	1.27859023152721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37321392-4	41.7736307813587	0	1.28233827655073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25509001-4	74.7497031309433	0	1.27916476353181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73779575-2	3.8148558367964	0	1.41746784014755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-98665150-4	52.8265474256282	0	1.34634398426251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122737019-4	26.2380769664554	0	1.28478567540594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98789027-4	40.3383754438678	0	1.2796961581708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16161603-4	23.5398114628292	0	1.27893846875621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117963567-4	64.3502787724099	0	1.28465553135144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145553411-1	2.22914848208152	0	1.48884700197897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80949656-2	10.7097337550041	0	1.31444132640839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-6310365-2	6.16642805586697	0	1.3022290092119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75170684-2	4.91526235340849	0	1.38915257121913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59435041-4	14.0643289791781	0	1.28742023851556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86434201-1	10.7102842883297	0	1.29178629458664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-31538449-1	2.36792129246	0	1.39951217647171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91358729-2	9.15688596019149	0	1.29396247645296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73803543-4	24.8000145842025	0	1.27552477027862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3695722-4	17.6978045294756	0	1.28553999266214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137943753-2	9.19078608111908	1.60529918316903	0.997659911461112	1.60906453664957	0.107602230697586	0.655789532471966	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.94408359324351	1.81653425145283
Merged-chr9-37041221-1	1.69301065109355	0	1.63951501018365	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182909805-4	17.0313139584615	0	1.29060897170433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8093616-4	70.0201588117244	0	1.27564765185113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43544599-7	36.7468959636976	0	1.27660689303254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73293832-4	18.5085666341714	0	1.28589677825719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50361949-4	22.0751620527404	0	1.27680810614925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129058169-2	5.89256809966916	0	1.33903053067105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94191349-4	67.3666123576559	0	1.27798848130334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120883951-1	2.15459766628036	0	1.41035486614045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170252848-4	22.7980656493501	0	1.27810133833655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135640424-1	5.98364370360895	0	1.43584154251771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26483377-4	30.417354357255	0	1.28017755317332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60239046-1	2.56560640012647	0	1.4239782028424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17660957-4	13.2138261866924	0	1.29117094518174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22666206-4	64.3733211298268	0	1.27956154916228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103059184-4	63.2100162318799	0	1.28277412056589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43056657-1	4.66486503490929	1.26211830559695	0.878691906110807	1.43636045446604	0.150899799776566	0.832477696597679	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67091456886492	2.17536435123496
Merged-chr2-79136163-1	2.70310487252724	0	1.49084981133116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35783801-4	22.1510959230324	0	1.2813188388971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46732721-4	16.7472347130821	0	1.27968119198535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102030076-4	12.582008102629	0	1.28567606943601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88952901-2	8.31088889457301	0	1.30953849138836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11333479-4	24.8321997493883	0	1.28110261944572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113681523-4	26.3314911348904	0	1.27849525611383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61397036-4	25.2833266942235	0	1.27683938062953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164862585-4	48.62517095555	0	1.27255406071769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153122893-4	14.1614613919815	0	1.28438230356273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144318552-4	24.4131859795228	0	1.28124404984934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54045755-4	15.1219647667362	0	1.28599301369339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59729028-4	30.9362321693955	0	1.28202578206678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70963772-2	15.6363097008392	0	1.36102087862344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97814386-4	10.2913745549592	0	1.28809554729634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13671359-4	20.4415718278581	0	1.28189656254073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87275552-8	62.8638581003076	0.230119509556263	0.243200687051646	0.946212415540567	0.344040254873186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77176087344625	5.90376664068414
Merged-chr15-38245033-4	31.3931279190912	0	1.27685971744213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46890459-4	18.517241301238	0	1.28482129720253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121284994-3	4.69766969778786	0	1.35222175196151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34140189-1	1.85912107555614	0	1.48561769359048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124620664-4	30.5722080523895	0	1.27434907429435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19300486-4	22.4340695704506	0	1.2786869984829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66478340-3	48.3129622030159	0	1.28005739460379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-14639-8	1062.71004294358	0	1.34825646421818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19628218-4	32.1330225966735	0	1.28428199752354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51367447-4	16.0573838070592	0	1.28656012169223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28517426-4	22.8444724716267	0	1.28560174001413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67304466-8	54.4007459877431	0.458062565921782	0.212347240136595	2.15713924808784	0.030994816331262	0.263071472656533	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68369790624188	6.16451236205717
Merged-chr12-12278632-5	59.7678950242766	0	1.2741982873159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155483842-4	26.4421010458889	0	1.27995399404836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111562032-4	21.1050707303243	3.37293420644952	1.03928647186174	3.24543260955507	0.00117272317852109	0.021465761575249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr7-67565285-2	4.70077889164127	0	1.37675637833869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53264291-4	34.2648362831159	0	1.28084744351268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106528115-2	22.6459992915328	-2.31115248769397	0.480106895560266	-4.81382898072511	1.48065532459563e-06	0.00011083035835169	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10235394252346	3.56482664821757
Merged-chr15-98867525-4	18.9781575173375	0	1.28252431424074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107968244-4	13.5158888996509	0	1.28093068471131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68706696-4	21.6352418464117	0	1.2821070154161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27238815-4	51.9429024350232	0	1.27766072677727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88243222-4	27.609770133027	0	1.27841735821439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32997889-4	27.6577686804744	0	1.28405119552063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45281075-2	8.80981516088578	0	1.29944500719839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58558316-2	3.68778212110705	0	1.39278212170773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101595831-4	12.189331724761	0	1.2906116955262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34534066-4	33.6715528985032	0	1.28132404471242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21566846-4	22.296637180471	0	1.27736810337265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118371479-2	5.86192223771845	0	1.30666440607965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24625718-4	30.8601830884682	0	1.28034932281685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25910299-4	18.057987269697	0	1.28053682554641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24506940-2	8.27391062872843	0	1.34246906910179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113186224-2	3.61908430751607	0	1.34397751411912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104110950-4	52.931639928254	0	1.27519362567466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117367627-4	24.2121674079358	0	1.29873669339311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30464155-4	18.8470985260035	0	1.28622837661593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80695368-4	50.9736086547061	0	1.27686560492903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78769209-1	4.08839668445405	-2.89242936924227	1.073836178913	-2.69354807189507	0.00706959498582102	0.0846563595278468	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45763478182113	0.683637474991079
Merged-chr7-88250577-4	21.0127102004676	0	1.28793970530899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6411507-4	32.8183672897736	0	1.27950795516441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46110829-4	22.5523032476656	0	1.31567443942634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12569903-4	29.8715142585573	0	1.27548192912948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44602247-4	22.0673582537908	0	1.27682074371653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26461001-4	21.8976243071124	-5.80444582593081	0.945534804289162	-6.1387965832675	8.3148957197764e-10	2.18210913937554e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9140607050626	0.469435083901436
Merged-chr19-5806969-4	19.1747386040506	0	1.28021365644964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22871940-4	29.1822466935662	0	1.27749759523065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57098879-2	3.87411046295249	0	1.38390345026062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124279800-4	14.2272911382491	0	1.2917681738869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97994977-4	17.2000948129275	0	1.28133141435725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63132505-4	54.9101378747384	0	1.27578578331935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14633326-4	30.4671527286224	0	1.30270644840358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99363233-5	42.8529052994643	0	1.27582486829255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40919691-4	28.1406778348609	0	1.27888919249795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97163209-4	19.2598167316952	0	1.28001256357909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3158295-2	16.2792865898547	0	1.28909774363831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4915980-1	2.93691155080485	0	1.94370247749144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37000527-4	18.9840410555582	0	1.27954850150776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111089062-6	55.6893394253251	-1.7558273315757	0.353478177785193	-4.9672863614305	6.78962914091289e-07	5.92356616611607e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48657070063728	3.78275886666788
Merged-chr2-131171586-3	9.04742906591088	-1.11808797578253	0.498563915599394	-2.24261712650888	0.0249215148729615	0.222293381229668	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19623413669214	2.96789871560186
Merged-chr3-37332352-4	26.7018774678873	0	1.27918459703173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150140662-2	9.28634860659258	0	1.30035029992386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77828684-4	86.4909951960743	0	1.2766858639211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38321211-2	4.59497208476674	0	1.33963332057883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31309734-2	3.24080138941267	0	1.517983373246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138159142-4	24.6722803937662	0	1.2800795348079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81244818-4	13.5877463140358	0	1.28167717945007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116184621-5	20.3740979630713	0	1.28132848077762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166730768-4	13.587199590797	0	1.29240882645469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117364977-4	28.5445139979396	0	1.27541069400911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83078199-4	34.0161133083307	0	1.27776087725837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101175324-4	22.7193468976798	0	1.28026137463666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113621248-4	16.3891507290396	0	1.2820340000632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113635299-4	16.0077932036894	0	1.28421070002236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145692251-4	33.3771410650768	0	1.28240466590801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141952376-4	63.2123563326916	0	1.28095039518895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40125359-4	65.9174259432319	0	1.27791232430708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143990306-4	20.6273466069121	0	1.28106868767702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59465883-4	11.5240787737902	0	1.31659389958108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66599786-4	36.8984685870313	0	1.27438319633185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57578503-4	11.4281979440238	0	1.28677071542676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98832619-4	44.3628122090505	0	1.27755844847552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63706538-4	37.1891780593972	0	1.27868761500458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164405620-4	17.109075206806	0	1.30118301013206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105393960-4	16.8477634504165	0	1.29012323517178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185224860-4	21.2293660626614	0	1.27860244254739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79178214-8	67.3687526210884	0.38636916106503	0.232972862255967	1.65842990176481	0.0972307253445361	0.607480541004308	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79802855198799	6.24593394409039
Merged-chr2-103605998-4	37.4236985545839	0	1.27714787160826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113446350-4	22.3721896238054	0	1.2928307291774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167133203-6	36.2221743016809	0	1.2778101867391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16208118-1	2.94542042639618	0	1.45778979123655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17858044-2	5.67702895330661	0	1.3217921211042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23430776-1	1.9440543242263	0	1.42588120965034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39435096-4	22.5075241789475	0	1.28748761402848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14608381-1	11.9435372870456	-0.396594443189869	0.438456776076541	-0.904523466916693	0.365717896698733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4903258305911	4.04531563433395
Merged-chr3-27270389-4	72.008832432785	0	1.28398846151862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61266679-4	40.9243857962295	0	1.28955350267114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4314064-4	56.2248395351105	0	1.27856669278735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64001747-4	30.8569422231653	0	1.27813654369205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53134388-4	15.8911202409675	0	1.28083116425421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32274970-4	21.1219182713715	0	1.27839132859241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-20694-1	3.56781618005205	0	1.77311696788646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4499488-4	12.2302278021738	0	1.27972463689349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100692468-4	17.0349309170211	0	1.27899717277962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83760272-2	3.23550971195545	0	1.46658450131821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46863736-4	20.162292340308	0	1.28679483248992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122138424-4	12.9482657290467	0	1.28291498429241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34612697-4	39.4498901372777	-5.78640604178221	0.768742994366909	-7.5271008440832	5.18793029061382e-14	5.71056349282621e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70569606773411	0.666688015277142
Merged-chr5-24044618-1	3.55657677461486	-1.40282530726291	1.18064231529103	-1.18818823372184	0.234759258276368	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30849351955396	0.563523181795778
Merged-chr1-149911251-4	21.9056563264578	0	1.27718307585282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41304509-1	2.35930445975421	0	1.42131405339134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55660343-4	53.4695743762866	0	1.28091400181549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87910825-4	14.0168005035378	0	1.28582771557017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43546710-4	14.8326782513068	0	1.28247896785104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43641321-4	14.5538596105736	0	1.2843930286851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123253014-4	38.1013281838997	0	1.27600439902749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137751711-6	45.1991562015348	0	1.28734028757447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54719003-4	19.92647650295	1.95478220011897	1.23810994735226	1.57884378871145	0.114371891904148	0.685224685831892	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr2-3355947-4	24.768016992184	0	1.27876555187953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67988273-1	3.06958612139981	-4.86173208450349	1.20007751117813	-4.05118172719582	5.09596085818489e-05	0.00184996544464607	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50291030122179	0
Merged-chr5-90504905-4	19.4820852475886	3.37674344460067	1.06131463041412	3.18166107187563	0.00146433071845531	0.0254964442121451	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.905469781553611
Merged-chr12-85701041-4	27.1699303530504	0	1.285096916818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70506652-2	3.32561363609716	0	1.36917179617217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64928724-4	18.1660820164401	0	1.28380372372546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138209702-1	4.42101439467116	0	1.39025833212014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7257201-1	2.71269246007782	0	1.61312647415071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36328820-4	35.3463348085871	0	1.27498442183606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122251913-4	10.7167403447067	0	1.28830361643175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116598183-4	10.1044252014068	0	1.2858976750367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31562801-2	2.52121017775824	0	1.46303456906445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78086788-3	24.9150828736018	0	1.2791619495093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73128656-4	12.4209716437701	0	1.29174964822588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123149856-4	9.07638993973341	0	1.28978011811162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156459850-4	25.4752740552936	0	1.27767848152676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47395880-4	26.9814640024869	0.0792073135487876	0.248435810118464	0.318824059667639	0.749859932658506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84184152347764	5.91640731652864
Merged-chr17-35210331-4	42.4804964354226	0	1.28796769139226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91522686-4	17.4944774931657	0	1.28647361468064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142367591-8	66.5124299144679	0	1.28078479794676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21863739-2	4.69640026274876	0	1.42586091805599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67596788-4	48.8745129423193	0	1.27550748449055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118709904-4	18.7870879075364	0	1.28455059010292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-6417886-1	3.85795902119666	0	1.5381906369032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6192094-2	4.53080661366236	0	1.399169216429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46081009-1	2.42145766498813	0	1.3695934428657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135731449-4	12.765867535491	0	1.28450895271374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105340013-4	29.3760220068383	0	1.27644721208335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24419489-4	31.1029204691047	0	1.27744524731859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3627189-4	26.9657654068985	0	1.28365878956516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35813375-4	41.8587466127955	0	1.27916761002055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19630274-4	43.6717366938924	0	1.27613692434147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35136801-4	31.5057325224	-0.915086547676231	0.549548152206447	-1.66516172241166	0.0958804953461289	0.600594981680228	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20554960443216	1.57215779683075
Merged-chr3-52502361-4	20.0918722711617	0	1.28026418411134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67069422-4	23.0015848272089	0	1.27864079388685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56207685-2	4.17483241205701	0	1.37343958516801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71936936-1	2.61397528800812	0	1.58487381434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121745730-4	16.0074258657117	0	1.27909074647568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102883499-4	14.7376558540702	0	1.29373511830937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114694599-2	3.6000184910554	0	1.39242411689394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28917970-4	51.479543564492	0	1.27658314573035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113999607-8	65.6762052112173	0.0371427971033981	0.208306458111097	0.17830842807374	0.858480760234519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1244497730618	6.20450390132493
Merged-chr17-80445957-4	14.540721178506	0	1.28719969463548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80166927-4	28.8727393121059	0	1.28937768837981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113490684-4	29.4385847014361	0	1.27933461055869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-48831511-1	3.30969055565628	0	1.47694936163502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131910077-1	1.97872794481286	0	1.40810544804253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82240847-4	18.61489263896	0	1.27834325776042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96374402-4	23.6760703354782	0	1.27928723470607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39771022-4	78.3663483447579	0	1.27908868466084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94960207-4	14.4453273708742	0	1.28175973209044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11513251-4	21.96576073542	0	1.27645370601735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83700824-4	17.9546076734403	-6.36004121614062	0.983518957584868	-6.46661781869295	1.00220693024557e-10	3.50215048469663e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22686203725126	0
Merged-chr10-61114406-4	33.2370412312757	0	1.27650664791765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11442055-4	61.1254221567303	0	1.27388448899347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78265371-4	20.0700696063096	0	1.28010598668175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58067962-4	39.6288560887986	0	1.27996907016527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35021998-4	17.1354864927466	0	1.27687394316333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122928993-4	12.4676019041792	0	1.29472530421612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27537422-4	23.0349237309617	0	1.2838875935671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110676834-4	58.1442280388079	0	1.27960346871793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13986693-4	32.2730323377358	0	1.27886330321565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72107288-4	31.5171694299335	0	1.27460918444869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5302338-2	6.3256973885504	0	1.38430176337395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88008904-1	2.711206868279	0	1.38275514495316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146079410-4	22.1943673428427	0	1.27755526060191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40637848-8	99.8590479841313	0.550726054100531	0.184855024150823	2.97923227475384	0.00288971633349857	0.043200961685838	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68659457948996	7.23562701953965
Merged-chr9-78532690-4	19.1108987036546	0	1.28005748100112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18976399-4	13.8818241563217	0	1.28201797527524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37314574-1	4.96895727522002	0	1.33280058377649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40598085-8	50.7103979903809	0.767755912044931	0.191573575273021	4.00762950188075	6.13312331826584e-05	0.0021528490986032	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61978950887542	6.38035192006759
Merged-chr13-8713601-1	1.35605991513155	0	1.60301955912453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83544452-4	22.7717390525371	0	1.28371739966703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88139008-4	22.7180313325272	0	1.28088801203482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62527649-4	17.4531712916333	0	1.2892532011557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34371883-4	13.346403104522	0	1.28172568547864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40998695-4	23.5273728489419	0	1.27921306116585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44702280-4	26.4639758406759	0	1.27721497819164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17181580-4	35.7897323389008	0	1.27731325255958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27973301-1	3.11264233791438	0	1.39457440150601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13587221-8	147.466654351961	0.251868206762566	0.165307233048556	1.52363694024559	0.127599430001792	0.7405073137564	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.75494586125955	6.98807599769999
Merged-chr13-5870520-4	25.3977346943536	0	1.28233245599802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58928135-1	24.6952028785403	-0.215570952995085	0.345555432372181	-0.623838993110964	0.532733328746097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11785312300224	4.89597872466619
Merged-chr2-153156004-2	4.24233987614626	0	1.33888556936293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19418205-4	23.9666240957064	0	1.31514546906794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24933907-4	24.7575907101998	0	1.27959822367554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60973795-1	7.63960709535828	0.911573862701789	0.769461111358208	1.18469127191202	0.236139534648404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73089694533143	2.43227213747251
Merged-chr8-39619044-4	11.3576819114202	1.92977928389882	1.25250369845857	1.54073739364902	0.123380712014835	0.723467756598685	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr18-80690140-4	29.6456938523653	0	1.27663558692528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131357972-4	31.2004839548277	0	1.2946816407824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100168777-4	22.0949923031976	0	1.28219524941085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183623503-2	10.040133126238	0	1.31908673501078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65227846-4	21.1012594270088	0	1.28302383686514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167805935-6	31.4104987052967	0	1.27889812116407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100409446-4	50.2941615869595	0	1.27845648194502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25284620-4	20.5600907982219	0	1.2802180298961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113572212-4	13.4013078359854	0	1.28423672001401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21336398-7	55.4994877918686	0.0787201713343269	0.229497612184471	0.343010851333178	0.731590296677831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98784596443639	6.04286614993905
Merged-chr3-144697312-4	20.9531929582213	0	1.28926052101052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167353821-4	17.5903249598325	0	1.28009327267121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15695773-4	28.8574611957953	0	1.28088835179462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86494040-4	22.8986606718992	0	1.29081136072039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94079298-4	13.7997165925259	0	1.28048229457849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53231217-4	13.5838460101078	0	1.28723962561062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52477606-4	29.230815153453	0	1.27960492610796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-139042138-4	17.4201220975877	0.694843560521294	0.670446207924582	1.03638972419911	0.30002036235401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55600946470082	1.63879159991986
Merged-chr19-29393542-4	17.4140942274454	0	1.28131149138481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96496916-1	4.8057623336885	0	1.32957198252231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32197887-4	22.8726142096806	0	1.28075940609315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25711327-1	2.88855699413427	-1.27370515679404	0.910798130283799	-1.39844946365575	0.161978138357362	0.8751962484786	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18613837311666	1.45327344926554
Merged-chr5-30651663-4	25.3245773218267	0	1.28053880941662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31081432-4	44.9888567996508	0	1.2789703031166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8597164-4	41.3173934291634	0	1.27425165420087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5035923-8	36.5622123220623	0.401972187403222	0.240192205934301	1.67354384310526	0.0942202830724731	0.593236579875282	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0467028024743	5.45647093197531
Merged-chr2-34977371-4	24.8188829065184	0	1.28737361710664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-29291182-8	86.9623668690452	-0.203184432295425	0.226236229401385	-0.898107402307073	0.36912829302679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52495989938825	5.32746039490774
Merged-chr9-13634558-1	1.43044833077128	0	1.63373581179063	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63046578-4	66.3084315236343	0	1.28095891120314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44956441-4	52.8205630786308	0	1.28435251408259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26541546-2	14.9723214270897	-1.75135720575322	0.616382790545639	-2.84134669659233	0.00449234449716584	0.059934002350306	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70214068171618	2.23285743666231
Merged-chr12-116441866-2	10.8316529196636	-1.67594379322636	1.12753891120796	-1.48637335400769	0.13718039381866	0.7784793759856	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54026400719652	0.382164212378408
Merged-chr6-42299554-4	27.0101549535839	0	1.28402204292177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135981669-4	21.627954152372	0	1.28473322015979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139409556-4	20.4372687968375	0	1.28848629196573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29418085-4	25.692599950949	0	1.28666107528941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5316706-4	14.5578984500945	0	1.30070244737307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123923489-6	26.9730021380248	0	1.28106956664076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137079978-4	41.3688329549465	0	1.27583049401463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119101646-2	6.14461523600537	0	1.45494093698411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61022658-4	74.0949066887653	0	1.27596118938948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110974913-1	2.71556475019569	0	1.40988204488988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85977891-4	12.3281410542908	0	1.32095721425895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97505962-2	4.60003899267969	0	1.40042190697003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62858614-4	35.0978588417717	0	1.28215131773205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-4356-7	829.024933355736	0	1.34052871473557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115423908-4	16.910704194832	0	1.28085319743692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8912148-3	10.7948171256211	0	1.28855648626705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132085111-2	3.47690667828649	0	1.40835154460925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75773694-4	10.469964526027	0	1.28059517068662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45361569-4	12.2758971419775	0	1.28892667177845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65245887-1	1.9622166295554	0	1.73596562926292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124013063-4	21.4859937609624	0	1.28300306779648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43363063-4	24.2485460063852	0	1.28180105242807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124282211-4	20.7021654143366	0	1.27957896390639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94566248-4	16.7672992519035	0	1.30168761311747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50545547-4	14.6177649963669	0	1.28502718296859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101841429-4	18.5883514386172	0	1.27656880665022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87511167-4	20.1732629370072	0	1.2760174148393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26835850-4	22.8135309696946	0	1.29127042868789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48878754-4	47.5519563569346	0	1.28120817319654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88648288-4	20.6533285602408	0	1.28823310839068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29624130-4	18.8417889188791	0	1.27575852089788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52722810-8	64.1632638974912	-0.000148770233058039	0.206706437527971	-0.00071971746423189	0.999425748596726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00032700163241	5.99665777548369
Merged-chr3-98025678-4	17.279699559298	0	1.28195181986838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33418092-1	3.31086079016123	0	1.36486418135047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50779583-4	21.1707262739357	0	1.28001871884247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166471649-5	25.7524386939363	0	1.27938381828713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17839788-4	38.9275954016676	0	1.2768864296024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87303693-4	16.6047196105668	0	1.28186428007117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102025426-4	79.2415848939444	0	1.28027289976085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57500990-4	26.33960258899	0	1.27424711286455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120882367-4	24.3604852757417	0	1.30096193847605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115682980-4	11.4731432845907	0	1.29580504475168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77522172-4	18.7884252970495	0	1.28171639225756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112895174-4	16.46300891874	0	1.28811162859738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19628368-5	43.6405239257115	0	1.2757534142948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115108148-2	3.39609548195366	0	1.41497875604464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25634514-1	3.13489272250356	0	1.3555913887828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80746909-1	1.62993005771518	0	1.50903963117495	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25493700-4	28.5125250590675	0	1.27905179801922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99434462-2	3.86858618467134	0	1.53304932120611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4070952-4	31.170203628558	0	1.27451836964435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133511647-2	7.15632788567615	0	1.32070201549187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109247084-4	34.3417998425622	0	1.28879431180262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-37814446-1	3.3901673035117	0	1.33332459052879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88509203-4	48.5539944530883	0	1.27743698369279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-93005869-1	2.58146134792325	0	1.42421117751906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65150051-4	57.1671267401865	0	1.28384466080374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81112740-4	42.5880099239654	0	1.27744166569187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104410731-4	27.7071205309762	-4.93741126784704	0.788255298832249	-6.26372099897268	3.75897780659545e-10	1.11146680429768e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96545084745557	1.03956264035389
Merged-chr3-147071156-4	15.1496662279381	0	1.2808975258167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85571276-2	4.17093172100897	0	1.39059058333432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120279066-4	18.6018184344622	0	1.28269607817528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72967140-4	14.4609923359856	0	1.28016415803281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36133792-4	27.3383178545325	0	1.28732926003779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120786579-4	11.1579563050022	0	1.2885313554058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102752033-4	19.5567553325795	0	1.28060290257704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40558805-4	28.8639586517873	0	1.28376956245277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51907893-4	27.6386305989654	0	1.27444937244913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112897105-1	2.72111884673676	0	1.37478085702238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83538407-8	99.9727857614506	-0.396002608636688	0.181443591233138	-2.18251086161462	0.0290718505209038	0.250161857274029	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.65727840504579	6.2573624986687
Merged-chr10-96035239-3	28.5579002493413	0	1.27580846808053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166204361-4	30.0982327030749	0	1.27840200510665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45752403-4	9.74485318782459	0	1.2887922930406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71274487-4	40.8828363528817	0	1.27871363953302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146764792-4	14.0141811703137	0	1.28376000517095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65546460-4	19.738024665348	0	1.28126342115508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40156309-4	14.2832578732587	0	1.28675613134156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21034137-5	55.3062192161899	0	1.34834222684108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128654982-4	41.6538627154067	0	1.27740114273738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134004158-2	5.18783744576385	-1.39741899112026	1.00058849406881	-1.39659710200921	0.162534762258915	0.877188352706565	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88597072900713	1.5268023559189
Merged-chr7-81835627-4	18.5994186322138	0	1.28816515846664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13304236-4	20.0882169441324	0	1.2819207010191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100443709-2	9.60480349028885	0	1.30244732062279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29518677-4	65.7258423268143	0	1.28044884604946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-11905335-1	2.87388700340768	0	1.50913505865172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99353311-4	58.5556458860902	0	1.28079665717913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144215461-4	23.4158281485675	0	1.2807824243893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107830060-1	4.58514472747125	-0.203216185805108	0.746105517132352	-0.272369230810901	0.785338128912684	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01389284277773	2.4360226934973
Merged-chr8-70833275-11	104.112478088082	0.544170408439038	0.227567740735007	2.39124581841634	0.0167913062583889	0.163516948962462	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.274252399862	6.79435304246275
Merged-chr2-31062401-4	13.592321073771	0	1.28360912139504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86779083-1	3.5055874757429	0	1.35651268446789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79197215-8	163.147136882971	-0.0410263411200044	0.160593149206149	-0.255467567096153	0.798361990410163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.63936155090153	7.55823615145806
Merged-chr11-103984284-4	49.1928387910388	0	1.27660991682321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84143313-4	17.0811714588134	0	1.28599392519518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39590388-4	20.4983010753145	0	1.27875361813906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91065074-4	21.2067962164374	0	1.28199291268047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-66848644-2	3.42967087139635	0	1.90031492694433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115600012-4	17.5643803122093	0	1.29131002486829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29808725-4	43.9699070587629	0	1.29801555322291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83045751-4	30.6078184109068	0	1.28687980236781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113835204-4	20.8092596471622	0	1.27675303762581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80145740-2	10.6958781455076	0	1.29680731981288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85937141-4	17.3355494680356	0	1.28813076933548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3683191-8	102.210973088272	0.944749679641365	0.204708958768816	4.61508712331588	3.92930448308565e-06	0.000240191141956703	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77175127941278	6.69464256382672
Merged-chrX-77433629-4	24.9359870380275	0	1.27841192115611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145813007-4	48.7361361061044	0	1.27935246146656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122719218-1	3.43274684830385	-4.35356408553708	1.10765301850651	-3.93044032092934	8.47904382352864e-05	0.00277174386039171	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91209957104242	0
Merged-chr1-138158560-4	22.9456029982061	0	1.29192224705478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94589556-8	112.034686707773	0.133721259900213	0.182897280356441	0.731127656133592	0.464701183128936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.76302398570053	6.90146171115039
Merged-chr15-77800729-4	55.4876833683019	0	1.27581324002641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-38012324-4	29.1039935164529	0	1.27592269150481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80496561-1	3.62424483864973	0	1.36219817131064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23830486-2	7.64889152343936	0	1.30304294618703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10924620-4	35.2270051807892	0	1.2755800103414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-195241661-3	45.1156437671382	0	1.28986130900118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80177410-4	26.4368271892909	0	1.28141052593488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36719460-4	32.1066557025335	0	1.27688687200353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16086738-4	20.8575393504464	0	1.2797707757253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90673509-4	19.4343434635086	0	1.27818617058304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134102861-4	17.1274755427164	0	1.28509532089633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75770909-4	15.0308835227505	0	1.28659950894002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31008340-4	19.789466449725	0	1.28161967019142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124050465-12	91.7078007331905	0.276688645096855	0.185624170258083	1.49058522234556	0.136070426485665	0.77426489804356	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.44730305256663	6.73638665561781
Merged-chr6-116198139-4	37.5342698383475	0	1.28207258230348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191073291-4	92.4120868237125	0	1.28089563969807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5786689-4	26.7272914908278	0	1.27796867704828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74369133-3	16.3062559675406	0	1.29117256395504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31930593-4	18.7299477595867	0	1.28583782369114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184675880-4	15.7942984136715	0	1.29117153388089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64360294-4	24.1257251760036	0	1.27984710176395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125189054-4	17.9283846477877	0	1.2858900029037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116237591-2	3.9843156586481	0	1.36613770596334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117953111-4	21.9738533821742	0	1.27577082590714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91741115-3	21.4869769127456	0	1.28530282159108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23076690-1	7.02628670400497	-0.00876680463676124	0.789028712284622	-0.0111108816450761	0.991134981479115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7229541264634	1.43116362910629
Merged-chr9-105459174-8	116.597599997902	0.249211386390885	0.195637886870758	1.27384010519148	0.202720088647037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.54911905612625	6.80024791723719
Merged-chr5-24750869-4	18.8658150797991	0	1.27946018324803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26647050-4	21.1316059263609	0	1.278701315026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165983179-4	39.8135744131476	0	1.27818217129359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41480207-1	3.3887327706668	0	1.37567314529941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43648500-2	5.12516224756897	0	1.38207812546278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46485831-4	18.2057537862502	0	1.28004608632759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14112958-4	15.5261857801557	0	1.28104447936486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166235101-4	14.0816746513103	0	1.28471898570988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141239547-4	13.3726991780128	0	1.2882844722232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193894284-4	24.404407437219	0	1.28005979734932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167435091-4	16.2340203555163	0	1.27928858380727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72411479-4	18.9439987209696	0	1.28185583025906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36217169-4	25.1846076052004	0	1.2826921598558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26514881-4	15.3773994559115	0	1.28657583366916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136142112-2	9.21339641298901	0	1.28473841240721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113333230-4	14.5708725946216	0	1.28148941314006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108985049-4	21.122897178836	0	1.27994726646888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28037825-4	24.4133716489885	0	1.28224761677331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108766298-1	6.45883929766403	0	1.30790127680748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138292245-4	16.7346619219155	0	1.28049109926912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56615455-2	7.67239353736818	0	1.2953296020793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86440704-4	16.0582114997914	0	1.28486221080066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115902493-4	18.9301826013122	0	1.2830265008244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166719476-4	20.475164861763	0	1.28637205040927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39781902-4	28.3606073375397	0	1.27400575155355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99260121-4	15.8427864749135	0	1.28569789690916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5006768-4	17.6399861701428	0	1.28095353292699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69143204-4	25.7107806081173	0	1.2915778364813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115209367-8	58.6020382953715	-0.0369400317949864	0.207476424347489	-0.178044478601182	0.858688044872882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64501008471947	5.60167773542919
Merged-chr6-83043562-4	12.1631072403342	0	1.28281659999434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59653003-4	31.5894674473563	0	1.28242962390145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82849053-2	4.67457890876624	0	1.50797446109294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25473159-4	40.421651749023	0	1.27638267934015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69184288-4	17.9599998111962	0	1.28199346675083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38374483-2	7.39902144472067	0	1.57484155202241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31033934-4	20.9645642194044	0	1.2781263547953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54405413-4	15.5909301705963	0	1.28597602514718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31082859-4	24.2957921295813	0	1.27617630137886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152526431-4	17.9793630385357	0	1.28568391510662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34442245-4	22.6683640022105	0	1.27660830155435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90489133-4	20.925833036079	3.35176467758957	1.04188709909465	3.21701332179091	0.00129532584000629	0.0232311970046457	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr11-101587876-4	21.8759561947993	0	1.28471479425551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115429648-4	31.7517753735609	0	1.27735823509889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98786679-4	21.7272681471837	0	1.28452929487613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39636204-3	7.41643436838547	0	1.31449686057756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81129299-8	33.3077358415987	0	1.28292504174343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96010938-3	17.0691048906418	-1.95273883372572	0.529897564925135	-3.68512513168769	0.000228590305147839	0.00604510808587238	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57068150206592	3.52921369450234
Merged-chr5-125292082-4	13.9618657133632	1.41360374961704	0.916164254892521	1.54295885488664	0.122840759292291	0.721476924026068	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	0.793480537552656
Merged-chr1-191086763-4	17.8412631388287	0	1.28695796602759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71042107-4	15.0727457169182	0	1.28434488048681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32171133-4	31.3982609779528	0	1.28400166593259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35038952-1	3.17945837762474	0	1.33708207141613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35756686-4	15.7426294550129	0	1.280114047142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5195555-4	24.6084651329093	0	1.28143700878267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126548071-4	29.1819807829313	0	1.27856174996798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53536304-1	1.35868614948673	0	1.63563196038262	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51529051-4	43.252586669463	0	1.27913516923058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121748151-4	18.460763241985	0	1.30492331981084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78087291-4	26.9045168615165	0	1.28080783619631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79287309-4	54.9159467395138	0	1.2797470753342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30935919-2	3.00844657535592	0	1.43419714373131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83044019-2	6.90847987916564	0	1.42866869316982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113124964-4	28.397389020334	0	1.2883170046326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15727096-2	3.41487275787386	0	1.44639230382422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45801564-4	11.828892231219	0	1.28238405511546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31405944-4	19.2981089142928	0	1.28176960167537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81836635-4	22.6898972652646	0	1.27607093662667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80170078-4	20.6570212534176	0	1.28048509429874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37427379-4	34.5740602679232	0	1.28199576000522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95935215-4	40.4907365674651	0	1.28164210653779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59887589-4	16.9062272211542	0	1.27921921109424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112131381-4	23.231200157585	0	1.27902352273016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78451580-4	19.4614911617285	1.26997162672874	0.52968073839288	2.39761715818098	0.0165021027481988	0.161260117568984	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88206539420857	2.68739901532075
Merged-chr10-56582217-2	4.11601516066241	0	1.44618229903048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27191998-4	22.4534476511198	0	1.27596300375294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142929287-4	18.658425696032	0	1.27754033439982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42269598-4	26.579976895355	0	1.28180253373554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11249963-4	37.5092227716006	0	1.27746009563702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72538301-4	24.5487437735823	0	1.28331261349983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72025677-4	24.1132425195014	0	1.28275073425661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148221092-8	90.6795426884889	0.354992284074515	0.210809492441567	1.68394828886993	0.0921916628605308	0.582908214928325	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19103460226799	6.55064648108603
Merged-chr3-109129936-4	23.5270803218239	0	1.281536717091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163453447-1	1.67736838301059	0	1.50447345309617	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158233344-2	3.35205025958037	0	1.47088726948204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14559598-1	2.17781411977171	0	1.39636564984537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24103333-4	16.6820594315926	0	1.29401436606646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36115379-4	10.2992791430698	0	1.29791328378713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59187550-4	11.8024396033854	0	1.3020041001463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45032338-1	2.30322256105362	0	1.59100969276867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145371014-4	12.7375629372067	0	1.28466930164642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118820085-4	19.662857581601	0	1.28671652026167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-27208-1	17.2185770508873	0	1.28912737611953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60113897-4	20.3310281043529	0	1.28028919147784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81571008-4	15.2434437287629	0	1.29096016893361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79357205-4	29.3480066061972	0	1.30137445931562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49013197-4	18.5329422302817	0	1.29172893623838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131513482-1	4.73526841870648	0.691682596683077	0.641588432450028	1.07807834695796	0.28099879379117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88548822884955	3.65525490554892
Merged-chr6-148577859-4	22.3341817244152	0	1.27744228415587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161897315-9	79.560228105164	-0.427762885742366	0.162790599435047	-2.6276878838636	0.00859673530932153	0.0986586346194108	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.81210838981577	6.39298466056746
Merged-chr10-122747697-4	22.4456786307012	0	1.28477870929463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55686006-4	17.3439776708688	0	1.29717666663179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25980405-4	34.7207292904709	0	1.27639888331678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38211656-4	31.1581043104085	0	1.2870321103963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100272194-4	14.7491855042192	0	1.29212076549905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86872318-4	18.2253877212107	0	1.27940680859406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56266491-4	35.0220477216511	0	1.27851663260842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100126883-4	11.9944090456886	0	1.28959768491889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11460965-1	3.85083205110352	0	1.32391018423229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113437771-4	31.7523267829651	0	1.28951901942956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6415479-4	102.707874380986	0	1.2760571339197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5414585-4	36.211631041796	0	1.27649532921051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112278840-1	3.85713770449927	-0.841259269838334	1.36659318833462	-0.615588660194863	0.538166037394957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0
Merged-chr3-58470219-4	13.6992147365418	0	1.28650401176274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-76025721-1	2.47529392262177	0	1.43659625877823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117874413-2	3.44723139079971	0	1.37963092831351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103400177-4	23.7520334946046	0	1.28801936611606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41230477-4	18.5966690871052	0	1.27742763453439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82902739-4	17.6571655198781	0	1.28273308832322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11045165-4	15.0555958028215	0	1.28507994183279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61454694-1	2.43673003324123	0	1.5302133750877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91171946-2	4.86003955370771	0	1.3336837100772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128839927-4	22.2699656273365	0	1.27684636913776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117941117-4	14.491547993655	0	1.28366336940928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36038949-4	16.5246622046658	0	1.28772276408354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23884617-4	114.376546239418	0	1.28173518810135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69226171-4	46.4848513522881	0	1.27544475368054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99203653-4	19.7586828391369	0	1.28765561557724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54972088-2	6.89302481663239	0	1.30831356625022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126804251-4	52.6353509351709	0	1.28236500683378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69429544-3	13.8674219367779	0	1.28243398975655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93144258-4	20.556498645604	0	1.27911777125743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37010958-2	6.50178189125344	0	1.35197709987586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34944915-4	24.4593074033053	0	1.28185399032855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-88480314-4	22.5343999892165	0	1.27642214577399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109417701-4	23.4426020176068	0	1.28419010078718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64790835-4	18.8725453790465	0	1.28790160908555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107098222-4	16.2983761038049	0	1.28195552244912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29942636-2	3.904296575559	0	1.45019331308131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11420454-4	20.3308206122876	0	1.28085071150983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-28323195-4	14.5616936607407	0	1.28468487295568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146145233-2	7.44090999995255	0	1.371374391571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9878974-1	10.232622363403	0	1.30552566367925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4797952-2	9.33723517982656	0	1.30843253994027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3880623-4	24.0941536616952	0	1.27589266453909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73067142-4	20.7366069796146	0	1.28565115807428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47263858-1	3.50275404110563	0	1.36586755368285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122768975-3	8.73724446087819	0	1.30233688622869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46394943-2	4.99475292180309	0	1.36980758670777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55098191-3	14.8807300086543	0	1.28631429525993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37474798-4	15.097850180993	0	1.28096864478647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75196574-4	29.0384259812456	0	1.28157150165319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144138821-3	12.1852547653295	0	1.30940534965311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94221895-2	5.97583001081784	0	1.31190505841681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97187916-4	69.1468371068924	0	1.27709473543916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50819939-2	7.93442617380624	0	1.29449075655099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53268348-4	16.4057408704845	0	1.29205135507348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167092052-4	20.7251439668923	0	1.28318880178364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11385967-4	28.4805124912394	0	1.2771306829187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143907218-1	5.42036884105129	1.11676218960824	0.939321869415043	1.1889025753267	0.234478006617154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581562804033966	1.775524153257
Merged-chr18-60696915-2	5.81984700270313	-2.11748708251908	0.987887890622071	-2.14344876844851	0.032077080674373	0.269838943582335	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44395712696442	0.581381506691384
Merged-chr6-113660656-4	39.9686728200064	0	1.27599320209895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13666317-2	10.8519063053913	0	1.30419618784198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91702516-4	43.8577238317472	0	1.27867865299281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70354930-2	5.74262672586096	0	1.44045825229056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70985717-4	13.3928034559326	0	1.28305277764484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52567518-4	25.7169487584392	0	1.28473758577337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39674148-2	7.0836244005068	0	1.68921840541664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31061456-4	44.7860186227689	0	1.27891126015973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97581915-4	39.9298506872691	0	1.28403555454876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98816934-4	15.0703818181273	0	1.27900750904074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32305141-2	6.17943651256149	0	1.32589048705198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25009794-8	44.4258602262085	-0.0619995743152845	0.235561325508214	-0.263199292929444	0.792396975756768	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70940265651628	5.65423132194236
Merged-chr13-4662562-2	15.0620767647322	0	1.27810921028648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-14596210-4	27.7437239596308	0	1.27705441094753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37420857-4	53.8873553620847	0	1.27887057822056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5768017-1	1.8400547437975	0	1.50952929795431	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65745097-4	17.9370973714164	0	1.27988369304151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4504930-4	23.4003919756247	0	1.27902382341295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66428040-2	3.2534909938047	0	1.35258615347593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74297395-2	5.97856495389965	0	1.33676893634988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45248280-1	4.30275118196916	0	1.34286398626327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27709440-4	29.6948075751981	0	1.27779592751608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91415747-7	61.8086249534073	0	1.27734734424732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27508159-4	37.1641937379283	0	1.2791025346241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102810523-4	18.0812451403119	0	1.28755667020536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10953035-1	2.7832874807756	0	1.40910432240576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31573160-4	23.3742432158111	0	1.28093332608499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-54929551-4	86.1160583893409	0	1.2766770023447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38374061-4	60.7067944870907	0	1.2792981441568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139224945-8	53.9255377622616	-0.537995781719486	0.241691231232816	-2.22596318027461	0.0260166477826993	0.229431021053748	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.824401210033	5.18913026254229
Merged-chr17-36001368-1	2.65133942088206	0	1.50368231094386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_GL456392-23116-1	5.88967070628115	0	1.36080581261081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-10109876-4	19.9244736538912	0	1.29422361316989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25861998-4	38.9123743092512	0	1.27302119240651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134205820-2	8.54418628355556	0	1.36548449490347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60843255-4	26.2278191453282	0	1.28108852960359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29239707-4	20.0581758232222	0	1.28859779618854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132339929-1	3.56840188933246	0	1.33825120093114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107798340-2	4.77897801484642	0	1.37055514003858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12868776-1	6.04038509774279	1.96457862927241	0.671773871310441	2.92446418828418	0.00345049779927484	0.0492198710306513	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14661142738816	2.99910770274642
Merged-chr7-19817616-4	43.3045544955417	0	1.27718683701998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41403994-1	2.43888243970379	0	1.54473667855917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57282211-1	2.65182818563832	0	1.33849040008401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85344405-1	4.61123433957893	0	1.33113866383612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105225777-4	36.1306226435135	0	1.27791275624002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11231990-2	3.29346326050092	0	1.47719707201604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72429378-3	32.3760602107241	0	1.27779537484562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39166023-1	2.79416408282013	0	1.39564709429552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11140792-4	25.5086901347716	0	1.27726462152345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31247593-4	21.998006199147	0	1.27991078279147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30762066-2	2.88040958544965	0	1.37847254486902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95699415-4	23.8212918937355	0	1.28567329741071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36052807-4	41.2697146022775	0	1.27496834414822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20941393-4	36.360051107527	0	1.27894881747098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27874124-4	20.1522630260184	0	1.28136910250233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148164271-4	15.7194289567249	0	1.28848052209086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17862430-2	3.52572806423485	0	1.89436291914835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26744551-4	28.8371313591933	0	1.2879315251478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151211075-4	10.7767050183214	0	1.28695329401361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44315044-6	54.2348726107319	1.03295780395489	0.22619106824208	4.56674886405936	4.95346870586447e-06	0.000286958657848776	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20745663895109	6.20279095001286
Merged-chr5-134232811-4	28.2087517538049	0	1.28239356913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36631430-2	3.04705523739041	0	1.52092617900529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135203396-4	40.5118352246683	0	1.28035396266506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42419630-4	18.7120458099841	0	1.29175908831186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86972055-4	29.4076326144168	0	1.27839726336797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81350357-4	16.2690013179806	0	1.29119486520501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59448928-2	3.81801404770537	0.622895010055183	1.28947208083118	0.483062037026559	0.629051688193737	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	0.773587911294612
Merged-chr17-33563903-4	22.5508779790704	0	1.27701609598336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16046863-4	31.0238934584348	0	1.27801718332402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19898210-4	14.2722101290472	0	1.28415266680543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54161019-4	10.3207348620162	0	1.28288856692305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47220037-4	27.2059042801723	0	1.2801959744188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90238001-4	47.4144563420465	0	1.29560272590621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170317034-4	28.5027765639173	0	1.27386263120828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26640657-10	138.99868185618	-0.497986899917102	0.20104846424444	-2.47694953447462	0.0132510636771452	0.136901819295926	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.92483066558607	6.40928551737013
Merged-chr13-49205992-1	21.3381676290873	0	1.27797349543794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9140417-2	4.71238995166121	0	1.40887124185044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52513846-3	10.9144810211651	0	1.31496802253326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54736304-4	21.2316625195667	0	1.28035018694632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43558027-4	33.0714015135111	0	1.28529893528426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101830532-1	2.16670765566332	0	1.45225554486121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150566413-4	33.3226305040261	0	1.27578192993186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43849447-4	27.6032836610888	0	1.29046418386794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120363372-4	17.9011749083511	0	1.2879075629308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5518132-2	4.39317669635756	0	1.45402381917166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97517974-2	13.8561706344478	0	1.31212233565951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3463218-4	25.6601091356999	0	1.27993178128977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132710675-3	12.3319903638508	0	1.29319237989265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27161940-1	2.23072685920214	0	1.45679138931727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136898930-4	13.0201062000132	0	1.28949889707503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80109104-4	19.9935521916992	0	1.29852641692896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51611865-4	14.9641580919768	0	1.28229216592666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59186593-1	2.30128632121808	0	1.39451687492614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58749279-4	17.2234917650358	0	1.28908109599412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59041212-4	11.7892485544213	0	1.29133899262823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62842707-4	28.2631286135709	0	1.27955834588958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84335668-4	22.5922125201631	0	1.28187054946114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113672610-4	43.1974815473771	0	1.28094556086481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146806476-5	44.4674608978086	1.40821218286192	0.229715539444426	6.13024345792071	8.77446975405894e-10	2.28436852808261e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83430991955002	6.25107305704573
Merged-chr2-52959246-4	17.5215187683283	0	1.28208483200662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7868838-4	11.9590139835928	0	1.28520094565626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64590692-4	31.4510921866627	0	1.28078114018576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128333101-4	21.9109675090936	0	1.27806839500201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105023574-4	40.6731441207804	0	1.2743776827341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-20550553-1	3.18666507247397	0	1.34522803682625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99173079-1	5.27205852770524	2.71988966468115	0.83090188925079	3.27341855863829	0.00106255005771514	0.0199177843004744	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05566663599961	3.33145287800324
Merged-chr3-95645474-4	25.7261729956261	0	1.28994642324669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78868328-4	20.1665582674746	0	1.27674362713366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_GL456392-22755-1	4.05540530173566	0	2.43325225974963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85490124-4	8.33376772430839	0	1.30430494253439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-9653649-4	15.3658240683766	0	1.28920549391398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42392086-4	23.4088008940095	0	1.27661306000731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58423374-4	31.7432908659793	0	1.29810294870583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70544277-4	57.5036511279641	0	1.27615458166937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76179634-4	52.2076507013196	0	1.27655248654412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130205691-4	13.1402387828941	0	1.28408762531383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145306831-8	175.858653231523	0.181618619569931	0.147148971985695	1.23425000609306	0.217109758846418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.28586705613129	7.47786624450631
Merged-chr1-20941569-4	21.7119623571552	0.475293564408362	0.306122388893536	1.55262594848514	0.12051252275942	0.712614000646372	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34015646141451	5.7418921789212
Merged-chr10-118814965-4	16.256966447136	0	1.29070399703632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22313441-4	32.4567195146192	0	1.27778748778417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51195459-4	60.5411482572927	0	1.28108272950909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112760725-8	69.8527914383431	-0.291184482636587	0.175594151776975	-1.65828121090517	0.0972607196173282	0.60755176217512	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.46779905461315	6.21977746355419
Merged-chr8-46886381-3	29.42607553402	0	1.27841422281806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-88487932-4	21.1800857910208	0	1.27787775476858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122702383-4	35.6089912275319	0	1.27531864000604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112629097-2	20.2865281264137	0	1.28324923800716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69624598-2	3.19022449127529	0	1.41931395355157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123915026-1	6.26972118156833	0	1.36718458224425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3186832-4	37.751822890595	0	1.28441765369015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90576427-4	15.3709704270235	0	1.2779987010449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108848407-4	43.5572732022051	0	1.29548712252566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94370253-1	1.76577856992259	0	1.5435927539264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27329532-4	20.941218681299	0	1.28147674522087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62464220-2	4.92921941348885	0	1.4542996942087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99381143-4	12.9687029583278	0	1.28884050634199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77545107-4	25.5114741294319	0	1.27809013083262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86665996-4	14.1681879131952	0	1.28480990634558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111942097-4	13.5475606980439	0	1.28315511488852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130075956-2	3.24468302972134	0	1.35206455602467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113777057-4	35.6099400964531	0	1.28049324944663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12875044-8	173.119876175735	-0.27124626184348	0.151087622865137	-1.79529108142498	0.0726073352575527	0.489053712112816	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.95177894706407	7.67600283924082
Merged-chr13-37779571-4	17.2387387888759	0	1.27914991394476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191280876-8	81.2325429474623	-0.00206020075257834	0.196579233606403	-0.0104802563057262	0.991638118372972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.53228541642461	6.52182626206216
Merged-chr16-3714936-4	30.0543555047795	0	1.279591432414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65930056-7	80.9687881030058	-1.24895039844425	0.242747437316257	-5.14506110652402	2.67433744751576e-07	2.80059703277828e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.76698929981023	5.47324352702648
Merged-chrX-85797716-4	29.1709113236264	0	1.28083600231435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64100341-4	26.3642999711631	-0.729023175271946	0.309755747560736	-2.35354204405522	0.0185955048061748	0.177202837962383	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18942457943873	4.3054299345056
Merged-chr2-77342138-4	17.3323460272662	0	1.28168725089853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122811474-2	19.2326059475246	0	1.28110751268898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32311231-4	17.2871109556112	0	1.27988214534986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88113413-6	72.3054094266122	0	1.27614163898085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106628452-4	14.8973318248319	0	1.28627726794869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66856099-2	4.05162955210109	0	1.36685467953888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43679751-4	29.5585521790328	0	1.27863584333741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33847803-1	2.57846200185113	0	1.50020460290922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99268976-4	42.6667340315397	0	1.27976413455848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85374929-1	2.01238989252479	0	1.4567018173208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8604972-4	44.6441485891525	0	1.27435683546416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34715582-4	50.2149196545524	0	1.27554416203582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64083344-4	33.9395819995085	0	1.27391713685549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77386536-4	14.9447496110192	0	1.2867208817383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36999780-4	11.2162336749392	0	1.28821639197052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77536894-4	63.0398504946113	0	1.27476331736357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84811076-4	19.1452102440612	0	1.27816152539437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112668150-4	22.018593826985	0	1.28041215229594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53855894-4	28.8312170221745	0	1.27299609234683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24374079-4	23.1914187652873	2.44707992986977	1.15456275810069	2.11948628405036	0.0340493916962381	0.281644499972453	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.992113827166316
Merged-chr10-94474400-4	37.945945681279	0	1.27613856145052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58552260-4	16.1755800900325	0	1.28720832395491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16161900-1	14.7255687955259	0	1.27834021694936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-78909442-1	2.30029384715895	0	1.39452023777782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38350180-4	74.6669830770491	0	1.28108458118544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114249459-1	1.94287105553283	0	1.53746225326263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83276447-7	79.0533612763144	0	1.27445341277819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11300573-4	18.3372233354623	0	1.2784411592598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141869754-12	103.281495138794	-0.569696650424339	0.208417815638392	-2.73343547277538	0.00626774031775606	0.0775557202810239	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.49297711545114	5.91016424915411
Merged-chrUn_JH584304-53481-1	2.52767720272842	0	2.43325254069989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52078766-4	29.0626433113729	0	1.29106039886214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-99104680-1	3.3719178492925	0	1.35516587116375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36073364-4	26.0437665232644	0	1.2995452330044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142577304-4	17.7858355424003	0	1.27921695130592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104256653-2	5.6222344725613	0	1.43310271446182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79498870-4	60.4703103590253	0	1.27635598851804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126852342-4	32.852134095503	0	1.27602990484872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36029465-4	17.0139388082495	0	1.28434181270195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58402384-2	4.19393068569838	0	1.51582806441754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95162506-4	26.2043596485285	0	1.2803473862409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32336096-4	16.4385836611025	0	1.29262143180784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15765663-1	3.69038879728456	0	1.37803901671581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45050065-4	26.836907479309	0	1.27679759123561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25703960-4	23.8071067893166	0	1.28526234375394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8875392-10	150.551721256402	0.138985663178938	0.173262208434449	0.802169523491448	0.422454903086407	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.52604627874787	7.65205381064388
Merged-chr18-39519647-3	7.66665612118333	0	1.29193148780039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68160023-4	39.3103064440064	0	1.27738686874863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19370824-1	5.24205276896285	2.8125363360543	1.07429512968668	2.61802949518592	0.00884391603613616	0.100875290154888	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	2.22299259577626
Merged-chr4-3700198-2	3.48162190825256	0	1.49180518357698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43794617-1	4.23144081124269	-0.203195226978681	0.81242060244641	-0.25011087405564	0.802501606898058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89388335788239	2.39866631390539
Merged-chr5-105150985-4	14.5027185039948	0	1.29504808748475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69015371-4	30.9935796938173	0	1.27700374248671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21601267-4	11.3250665161548	0	1.29733891559643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120058827-4	41.4553013093471	0	1.28031603903636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64355446-2	3.42521706233421	0	1.37422822454238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39171315-4	16.971470597918	0	1.28333039659504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53931201-4	19.2273209057946	0	1.31316322148034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55257299-2	8.65018777406321	0	1.31668765454405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-32488-1	4.29406237393553	0	1.54688809782171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55312038-4	16.7047741904896	0	1.28765525621716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118700164-4	13.4788412303697	0	1.2799641661667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96177202-4	30.3433009116273	0	1.27679107991799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124051934-1	10.8177690838847	1.42115429586138	0.46461310328336	3.05879082147764	0.00222232261799804	0.03512817943776	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0601799886998	4.25857009345868
Merged-chr11-68446717-2	4.73873185458844	0	1.43641732617009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94386481-4	54.0413572855807	0	1.28006021548043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90852997-1	2.03474458371989	0.289682269754079	1.51450989142589	0.191271296010716	0.848313048367253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	0.683637474991079
Merged-chr1-155139027-2	7.47893699260287	0	1.34394796784936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10676927-2	7.50044316915007	0	1.32814414961001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94405669-4	10.36216150103	0	1.31036147491354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40937294-4	22.1495827455931	0	1.27754910734852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128374264-9	123.026591409014	0.442349144818903	0.185435501981735	2.38546092895671	0.0170577342000632	0.165428123929553	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.81231180144737	7.24430592884332
Merged-chr7-111976655-1	1.36419566344763	0	1.81476248561693	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40924539-1	4.69274889404986	0	1.33350626675873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63278961-4	43.1021864494311	0	1.27443057542689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35870444-8	50.6888148373687	0.179497524023193	0.244652609256111	0.733683260395106	0.463141803075212	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17541660164371	5.35593265163088
Merged-chrX-103299104-2	5.9875526366777	0	2.18321355662995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66882654-4	23.3497976430639	0	1.28252488016762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113637894-1	2.44424944939246	0	1.40873709726293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42001425-4	20.5798479975152	0	1.27552476951382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82505163-4	43.8976442342685	0	1.27695472232656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49425009-4	20.8653270303514	0	1.27678144957325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105662088-8	155.791278171711	0.25399675522171	0.144431293246028	1.75859918936712	0.0786456107778785	0.519007643650851	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.73169481056719	7.95487507820817
Merged-chr10-44625737-4	35.2615802423989	0	1.28526662620973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115119609-4	21.3835100858811	0	1.28349421113387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9180460-4	23.8517419123878	0	1.28015234723365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76762020-4	24.3989364653822	0	1.28030217497169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91438265-4	19.5600505035087	0	1.27698455573687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-38013351-4	16.9808942721715	0	1.2817970841357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8636222-4	35.507968527149	0	1.27798451782538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74957447-4	19.3146177792333	0	1.28168035845775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21411915-4	11.2878629182852	0	1.28158464086576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75502763-2	21.0319514086271	0	1.31878096735761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80569878-4	19.3035588384519	0	1.28011065860684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73804004-4	80.7929483916166	0	1.27730340563428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66953432-4	12.5629309685289	0	1.29904981025444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-36989630-1	1.68307662728807	0	1.59865643409886	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86434543-4	52.3034956228451	0	1.28167396437309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96466141-4	27.1481557763453	0	1.28543160193747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27708634-4	21.7564195169523	0	1.28129292564347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67437672-2	5.6750126912774	0	1.31126924558143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114745344-4	14.1933101683549	0	1.28239526768026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158168723-2	4.37425138446735	0	1.33167097665426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95682819-4	37.8934306360805	0	1.27768737240574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20059087-2	9.72274259650587	0	1.29345880511058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107838301-4	29.372718034243	0	1.27569123140512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143999506-3	17.3841747607582	0	1.28526711313832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102046894-4	17.8130072871083	0	1.29803929501281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121225141-4	19.2861924314203	0	1.28680576595193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52503793-4	46.2882609853228	0	1.27811625010596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28224214-4	15.7084650612048	0	1.28939342524081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101949433-4	15.109732471277	0	1.29130195108957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153299155-4	30.9262545682524	0	1.27590426607058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65931177-4	17.894421969126	-0.00166522148101001	0.853228457131465	-0.00195167128697096	0.998442792600936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25068176748391	0.963545719069792
Merged-chr15-6267116-4	13.3027620441316	0	1.28686135649738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67422006-4	7.66316755195095	-0.419654945667937	1.31228282630004	-0.319790015732468	0.749127516795201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0
Merged-chr10-96351541-4	28.3037392088586	0	1.27435485172529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84273084-4	27.6357998554741	0	1.27805693807673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66743114-1	5.1749768939284	-0.261764166128889	0.695293779337891	-0.376479948343792	0.706560119759522	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53512934404932	2.74451593490824
Merged-chr10-24634434-4	61.498759495392	0	1.278674293279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116193353-2	5.39621635429352	0	1.67716306177277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118662694-4	87.1211524167413	0	1.27830034958842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91138463-4	32.6734016819958	0	1.27873471137699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86570962-4	14.5365338532183	0	1.29371463467574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128653829-1	6.70297695613066	0	1.30739867909424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120187778-4	20.1396863470247	0	1.2826696238786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86447291-8	71.4894081944502	0.186586397352171	0.18752717834959	0.994983228534131	0.319744421408242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32372708849789	6.51292284881896
Merged-chr5-41739000-4	19.1347792425674	0	1.27711956456766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-2040-1	1.35091643812578	0	2.20398597048226	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94365738-3	65.9443695649469	0	1.28029612603189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69669734-4	14.9572941044151	0	1.27988708972532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89896739-1	1.58440820840777	-0.425672206914734	1.61249517147494	-0.263983554459499	0.791792591034135	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0
Merged-chr7-55853005-4	33.5040134721331	0	1.28257301652147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120516286-4	40.7931349006395	0	1.27899288368199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31279987-2	13.0729225927909	0	1.2841396323025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11352545-4	15.3835575223584	0	1.28047793481139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88259257-1	2.25038990136235	0	1.43513204041344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58481337-4	54.742304942936	0	1.28180631086265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128381190-4	17.0262353511325	0	1.27993710251981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59552616-4	23.7656690804344	0	1.27874204474741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98896892-4	11.013670775506	0	1.28184841877313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19316541-5	89.763142807257	0	1.28113664473385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17001153-4	23.7100097986509	0	1.27689735760584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95297943-6	35.3306764652153	0	1.27379681969345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9038530-8	94.5537909398741	-0.815646575158325	0.173255580213077	-4.70776510722026	2.50447454153155e-06	0.000166827108451499	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.17003311498104	6.3636922297573
Merged-chr5-96980309-4	42.1315127622507	0	1.27519629485126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86074321-2	4.90858932791496	0	1.32417268957674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99902643-4	14.9886220285401	0	1.28491101718215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182503701-2	4.36386140173057	0	1.40107401818885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40681935-1	2.93232960293215	0	1.36746681176658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117871731-4	14.8601788726484	0	1.27892848484983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11119466-4	21.8222478185297	0	1.28450351998575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132332990-2	8.88045523282734	0	1.29780836727352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71135290-4	39.1810511594711	0	1.27982282601905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144561765-4	13.0396511391441	0	1.29162887168189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93032166-4	14.967766963087	0	1.29400588851285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45758132-8	207.080407989958	0.201037586029086	0.161514194783269	1.2447053727931	0.213240070298761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.04423743695799	8.23857522626056
Merged-chr17-83861747-4	25.9965252437406	0	1.27979211796376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11461696-4	32.1994013751832	0	1.27616451766294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43951805-4	26.6281316321897	0	1.28206749168769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55113689-4	58.355147030548	0	1.27617477703469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108165101-4	22.9246895236633	0	1.28105140297277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11690405-2	7.38089622797254	0	1.36168571060636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54013432-4	21.4454582281565	0	1.28333415833178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41003219-8	160.262353005709	0.133331128277982	0.160853701724784	0.828896859993362	0.40716277233559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.58176534930914	7.70013300629009
Merged-chr2-94045735-1	1.88005152674104	0	1.49445449546287	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120055191-1	2.66192299246931	-2.79545592364863	1.24765383743793	-2.24057013232864	0.0250539332049311	0.223261191764548	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84851638187926	0
Merged-chr3-144872196-1	1.88504780897852	0	1.54371136611939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91607148-4	39.2683492378944	0	1.27632608030981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123377494-8	36.0161700187964	0	1.27781803132796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-14603-1	4.43460345212013	0	1.45921783243511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115666810-4	31.0596169860648	0	1.28399498440456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136690261-8	130.612014417851	0.22963005487266	0.147518941279853	1.55661403803757	0.119562148835878	0.708653802977715	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.99712861829183	7.18884277385642
Merged-chr2-68434725-4	23.4791553739432	0	1.28490339997458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29601580-4	12.4677116202195	0	1.28478897153376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27923810-4	22.5588553974837	0	1.28578042527815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80647562-4	22.6405412540574	0	1.28571525256884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135266083-4	34.0365073971764	0	1.27542357063362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50698310-3	14.8098055249518	0	1.28077129770369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165639721-4	16.9078497160504	0	1.28611174800967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92620910-2	12.0533067662442	0	1.33828399686512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108380403-4	19.3020904341859	0	1.29191091548885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135699471-4	17.8683283021129	0	1.31554035563703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111246463-2	2.97176194098574	0	1.38075453835439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3646015-4	18.3826572723355	0	1.27668396557549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119398427-4	36.411591522474	0	1.28202195402375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98776475-4	25.7253442197444	0	1.28122497298254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48545959-4	60.7329373752399	0	1.27878371134875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120054356-4	14.5682400538293	0	1.28489867168966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90877161-5	25.6622911056877	0	1.28474952336373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84235867-4	53.6896091401678	0	1.27622175467437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166554127-4	17.4437183693027	0	1.28353648712998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65795308-2	4.53085898221361	0	1.4349673517918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3185941-3	18.0161253145374	0	1.29085420050352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36264353-4	22.8216013953646	0	1.27783892812572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103400561-2	8.3802220808232	0	1.32225865762566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97464174-16	160.195851316708	0.89265211337531	0.170767572657489	5.22729286060484	1.72009932899112e-07	1.95481062177832e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.84316423502455	7.72778962832395
Merged-chr7-28375692-4	65.6859339215082	0	1.27612059471522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32950411-4	28.1652987836702	0	1.2807923281146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41153076-4	18.3875260678843	0.828671966660763	0.628093789773029	1.31934430837187	0.187054031178348	0.971331271565506	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5787047628849	2.00345263627502
Merged-chr17-10856054-4	14.1050001750483	0	1.28369491505653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35305452-4	85.0231699166645	0	1.33854097353209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-11613277-1	2.55014194273227	0	1.42640652999932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55294216-4	10.981212152472	0	1.28385808475456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63410790-4	30.1699744069807	0	1.28134467042378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65724906-2	15.7039488257985	0	1.28363823955199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138683256-8	79.8435890986032	-0.239492452862733	0.191848557825582	-1.24834116856102	0.211906143829441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9324042863389	6.67239455444691
Merged-chr8-117288103-4	21.1064635751461	0	1.27566417744362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127981218-4	51.0354505977372	0	1.27442881527366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-101552952-4	23.1419877166567	0	1.28722363724713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126477783-4	30.3732338372273	0	1.27906517604746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70834805-4	39.262698259168	0	1.28074415325472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43778282-4	33.2541963263021	0	1.27983594904859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92415963-4	63.1764459135789	0	1.27722921528297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73537942-4	104.726218437729	0	1.28545899172125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156996652-8	65.7602748034161	-0.445663768628008	0.176904835248153	-2.5192288724209	0.0117612179732375	0.125477314233335	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.59235352838471	6.16023698330763
Merged-chr1-125466844-4	31.9855510139524	0	1.27708248599585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14192273-4	31.885249110857	0	1.27982420938934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84967569-4	14.3182263723007	0	1.29307996692583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95193206-4	28.84840249703	0	1.2799474390921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152903717-2	3.19813088853815	0	1.42341169259197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41587525-4	22.2029383553682	0	1.27893577451077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83269853-4	28.4145876250351	0	1.27626808087945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83737359-4	41.1179622458381	0	1.28388398154653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34185684-1	1.70084528856117	0	1.7425387226228	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93199088-1	2.65449567431831	0	1.3979788560849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116019152-1	4.74499104191967	0.319131162234977	0.941148116737223	0.339087075200599	0.734544134767453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39794563976683	1.78481374055866
Merged-chr3-104794691-4	31.9201188275864	0	1.2764171814077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97826876-4	17.5205187022414	0	1.28507541502804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43642492-1	6.6163619675861	0	1.33175311307784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25487451-1	6.24011936278866	0	1.29672944486684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43996433-4	33.2724160591636	0	1.28084843246934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70119033-2	3.56127097959156	0	1.36953503117217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46522663-4	39.5220922650556	0	1.27706412572028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51454162-4	40.7751320411725	0	1.27573141053982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41579727-2	8.30802061307129	0	1.34623183897952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125271686-4	24.6530625015995	0	1.27718459910763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75086265-4	50.2036645932833	0	1.28087708543999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55447281-4	25.6618063100523	0	1.28623049304312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94575107-2	5.10115828846582	0	1.98548944877542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111944310-4	17.2666328987081	0	1.28084605075123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44676720-4	14.2907709721368	0	1.29621410411393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23114635-2	8.27839987895581	0	1.32469922363968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47015871-4	20.1214880955318	0	1.28566075522361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109468367-2	6.06550158418982	0	1.33315027667024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122903678-2	4.39804861787956	0	1.34362863638096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57482452-8	65.8394267908664	0.314245811003541	0.179809773903148	1.74765700541287	0.0805234379251047	0.527505031836478	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03024561297596	6.33021141299044
Merged-chr11-110358456-1	1.83140447432798	0	1.55618059635357	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69366022-4	17.6314379179621	0	1.28074122752387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66793601-4	14.7027272990236	0	1.28371216607963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78557080-2	3.4917858465669	0	1.37131272381804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58744659-4	24.1911880864643	0	1.27962974149115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166757459-2	4.88035878230236	0	1.30956088781491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116664276-4	64.0854328972631	0	1.28280026448254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66555572-4	15.7564360430331	0	1.27932765000782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128536477-4	18.00955630673	0	1.2854891777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87184082-4	14.7072383085846	0	1.28705866614929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167368586-4	31.9760209312046	0	1.27637655010952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141123147-4	44.7423503743943	0	1.28055838537014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6268936-4	28.253070919376	0	1.28047813186623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99460044-4	43.9322232876222	0	1.27595544524155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88631056-4	84.6556765965453	0	1.27891742569053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17166610-4	43.1246151468167	0	1.27632630162162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83534880-4	33.8125354010974	0	1.29573257202544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74438181-4	37.0528794083947	0	1.27882633697792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67445567-4	29.8437693090475	0	1.27994546391816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94909528-4	33.8264246449223	0	1.2764635704187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88462890-4	35.0860351654237	0	1.27811003679576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81971979-4	39.1509069253738	0	1.27286883498532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120151892-4	22.3855825621745	0	1.27508836895879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16866034-4	20.7980989133996	4.12331492002795	1.00557691056041	4.10044709333075	4.12352703550351e-05	0.00156855718778867	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.38442592474823
Merged-chr18-7693081-3	14.2546455814303	1.37425845395701	0.772042749369628	1.78002896222921	0.0750712209895992	0.501287963088734	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10450937279159	1.6950503635711
Merged-chr3-152707703-1	2.68993332976985	0	1.40627657191725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92885637-4	22.954902537069	0	1.27953864492366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31084116-4	53.8189817414568	0	1.28114137161526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76763106-4	21.8817143458575	0	1.28285236326554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85703672-7	90.873002442299	0	1.27658791204496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137371852-2	4.65951003858437	0	1.38615393065762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113636137-4	18.2772637110999	0	1.27865736904151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40381374-4	16.931701045932	0	1.30289108699711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-37255585-4	12.6209911765823	2.24148559525838	0.911015630165521	2.46042495983425	0.0138772588935384	0.141448036134326	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	1.93871841517079
Merged-chr3-36853396-1	2.98415507325422	0	1.42845342905445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111933500-4	17.1276666540513	0	1.28160409503878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70395230-4	62.3301971010025	0	1.28105486064962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44686898-1	1.77845073764186	0	2.36150254406756	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49196641-2	18.6386504012744	0	1.2882762319013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110164237-4	35.8549996238658	0	1.28252302281588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130073207-4	23.9518797746063	0	1.28154701677525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118408213-4	16.1278292552276	0	1.29429397652504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63738239-4	27.8531029284041	0	1.27657550374416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123924265-4	23.3805691294964	0	1.28081143763034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132573537-4	15.0173815232206	0	1.29008778233734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156222270-3	26.476873721986	-1.68540176742085	0.866832361004587	-1.94432262019799	0.0518565585449403	0.380743671312098	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89218409259523	1.91645818320609
Merged-chr15-7115309-2	3.47679956299058	0	1.48596501497518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19418073-4	23.5873961328689	0	1.27927897234684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11455348-4	44.9452656416007	0	1.27543475159611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103181183-4	19.0972410533561	0	1.28404626532684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120453811-4	18.5001011084991	0	1.2987969720788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42099598-8	94.9515536393207	-0.964968032871419	0.189350817668264	-5.0961915282669	3.46554521168009e-07	3.46798648395784e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.49297228330629	6.54416144820895
Merged-chr11-75644943-4	13.3730080880238	0	1.27986245387461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38346007-4	19.9535005962982	0	1.29370280351043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28180968-4	30.3204652856925	0	1.27898281940406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86427556-4	10.4365245882132	0	1.28612874802209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31770820-4	21.0493112317411	0	1.28616388022827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16015341-4	13.872049295013	0	1.28095870729035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100084178-4	20.4529389848165	0	1.28022161909173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113351810-4	17.8633006261069	0	1.28049033385119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9806105-4	13.8458281452404	0	1.29694238068063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80746345-1	6.13520147018875	3.63432416118868	0.76566768470294	4.74660774353916	2.06856557235137e-06	0.000144569503626602	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05799014048757	4.26924515679846
Merged-chr8-120743770-4	22.6615179180105	0	1.28512248568491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18733298-4	31.8708515605687	0	1.28109915762863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7846966-3	12.7652564929288	0	1.29717289135583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135206430-4	18.8107972975516	0	1.28636746282951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61199784-4	22.3953644800285	0	1.27949405872182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88135432-1	1.12846231986573	0	2.05655882290215	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6574807-4	17.9741698292469	0	1.28101812843491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92441676-4	42.0575512191231	0	1.27913221823763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38395616-2	10.8494879258721	0	1.28682121826525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118578086-4	17.017094849989	0	1.29784263591921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35639214-2	7.90484191616384	0	1.310978788394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21540249-4	12.5813253564752	0	1.28883139123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50736935-4	15.893316132066	0	1.28486650897298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94865707-4	17.2406479228415	0	1.28007689690147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153571983-4	10.1077528135508	0	1.29986704434185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191198127-4	33.2929098538477	0	1.27557745490504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53796986-4	26.9035383786586	0	1.29163950842266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100635259-4	24.7076210403942	0	1.28392975785382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19131612-8	131.163618286877	-0.246384804886117	0.229221107862394	-1.07487834424928	0.282429198699834	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28120048266507	6.0452252857832
Merged-chr2-90501005-2	5.05870424470369	0	1.34286060046757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128004585-4	21.0812008318048	0	1.27757318550602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75425959-2	9.45240011200362	0	1.65491828382314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46033258-2	4.47627413651677	0	2.08708714086519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32693934-3	7.47221957057805	0	1.31809154698641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4528593-1	2.59845617139389	0	1.39746364440812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24442513-4	37.5155706379887	2.43878993449181	1.14371364378303	2.13234313304605	0.0329786486121409	0.275543123923917	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chrX-109184900-1	2.39259259211819	0	1.3826898031063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110633493-2	3.9085284160719	0	1.45208959067058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69408781-4	56.5593393488881	0	1.27948163769571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8994996-5	23.3026165589668	0	1.27913602910798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20027201-1	8.15241731344813	0	1.30309704023111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90612562-2	4.25420919119487	0	1.34842217716881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35832947-1	3.53070154315272	-2.55466132157094	1.19590065631596	-2.13618188775037	0.0326645911731924	0.273513630805155	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2683195048739	0
Merged-chr8-126807445-4	61.5552342071607	0	1.2774149870277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84342599-4	13.1515996359291	0	1.28308004757657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80272719-1	2.52833338836959	0	1.4343984685853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57592848-4	18.1492116354133	0	1.27934283096356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71165203-8	106.880278418727	-0.223150207056611	0.218924658751752	-1.01930138125578	0.308059908450902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81618222071385	5.61102775143037
Merged-chr18-60718789-2	3.56323895075738	0	1.40807943439993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13671820-4	17.7407328348306	0	1.29306481714222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44552374-4	13.5694077000613	2.45194926626116	1.16871730241515	2.09798320020951	0.0359066294454132	0.292635895203289	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr2-32499547-1	1.85296903098717	0	1.43673824402689	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84117003-4	21.4205567591762	0	1.27699340560352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34828108-4	22.8077638035344	0	1.28456695381688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106321578-4	20.7758150707595	0	1.27950745734885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27688188-4	30.624244893266	0	1.27806879253929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144317830-4	47.4866014350664	0	1.27743510445713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19299431-1	2.42566245357351	0	1.44633307269431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137775222-1	6.31452814648929	-0.00880046288199156	0.701351204819783	-0.0125478687731818	0.989988511952069	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52956052083602	2.08954570417147
Merged-chr14-19771422-4	19.6425827631875	0	1.28688001952171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79704482-8	60.1003486070803	0.436068985704921	0.23709593744734	1.8392090155563	0.0658844491473364	0.454383663744785	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38504759947133	5.82793332763521
Merged-chr4-132808309-4	21.7850804790392	0	1.27978928567668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103341358-4	58.804129852469	0	1.27720851255367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58755250-4	15.8369918797942	0	1.28201352395303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50872783-4	19.1849772263552	0	1.28170447321888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61669755-2	3.95563176639691	0	1.36052538176728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45085812-4	51.033507418995	0	1.28142012759114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47508452-1	4.72726556140521	0	1.32965595687825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-17593522-1	2.05280157505958	0	1.59956195370854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35766557-4	15.6965569357375	0	1.28036079054554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27784060-3	20.1022246867949	0	1.29166203988258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181126104-2	3.59763406634083	0	1.3833914122598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-28520112-2	8.72811311705268	0	1.28998391145722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89277793-4	31.1248114526055	0	1.2858454151795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97773395-4	41.9682208471324	0	1.27886393705119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27355237-4	24.9485348327072	0	1.3065280768781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85029128-2	8.15126262078683	0	1.30428125003767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-120207842-4	29.5121846663954	0.169307570305081	0.312774217090999	0.541309229001512	0.588294460323293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10666170256083	6.27272195720625
Merged-chr5-32714081-9	198.779677067634	0.785324836402883	0.178536475032827	4.39868008068651	1.08911234656228e-05	0.000542034542257875	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.46596018333011	8.24506609167852
Merged-chr2-98662336-3	54.6079218456554	0	1.34640626443354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28401898-4	12.9319967155597	0	1.28575727238256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29443975-1	2.8647142932239	-2.96083206256474	1.18967302326144	-2.48877801267423	0.0128182974004208	0.133720380256688	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9961446456468	0
Merged-chr4-83493258-1	2.0625208660059	-3.6637724090744	1.28953985466326	-2.84114709275978	0.00449515735577729	0.0599470515450251	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47609424411243	0.306240821987646
Merged-chr16-32124927-1	5.55386588470509	0	1.33267120759776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105994007-4	27.0052485210494	0	1.28239297599975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55227857-4	15.1449505932022	0	1.28060623561669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23280669-2	13.8287515178788	0	1.31744082076897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87413465-3	21.8701347578342	0	1.28587359036259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117343726-4	18.3704427712198	0	1.28149693918819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23731209-1	4.41733178096419	-0.398138521024871	0.920770886604381	-0.432396947836965	0.665452936051247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78774892421826	2.10370544471103
Merged-chr6-128834599-8	95.023699440808	-0.127498607844388	0.222068366289819	-0.574141242962948	0.5658722262378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.46406507922109	6.31987836201215
Merged-chr10-45277172-4	18.1081776629972	0	1.28638585491726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101905841-3	19.6743287716657	0	1.28278684253228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99172730-1	3.49040984538903	0	1.33163848908484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36747966-4	18.2659213779755	0	1.28139212537518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9538803-2	8.82153626471788	0	1.31848832379599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102451722-4	46.6222108081857	0	1.2821284312818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136966125-4	49.141236340867	-4.66077015502039	0.803640730493234	-5.79956935751607	6.64854359926091e-09	1.25565239895174e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.07530183630063	1.05016208779462
Merged-chr12-82401658-4	17.6468293828399	0	1.27742199158793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66124796-4	25.8641148264929	0	1.27770161793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148881585-4	22.2731656730659	-4.2156154327279	0.752859593295712	-5.59947096413244	2.1500694070908e-08	3.4184534179016e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20831512403701	1.03956264035389
Merged-chr12-82448306-4	22.0037126931295	0	1.27905504160144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173973331-3	17.1046628741269	-1.25330995448879	0.57583122467754	-2.17652308658779	0.0295161693124823	0.253218274897396	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09307505582316	2.58197412052501
Merged-chr17-73942745-4	14.8408223559491	0	1.28466781442666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124021910-4	12.1447156935323	0	1.29127183783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137289736-1	4.38984003735256	-1.20931390185562	0.995907727668435	-1.2142830789021	0.224639644935886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76993623869297	1.31734301959449
Merged-chr10-57492261-4	34.7878208111521	0	1.27939705347587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32935191-4	29.3788288858926	0	1.27642209861125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53112916-2	2.74676567579254	0	1.42406618127468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120038430-1	2.54201006408766	0	1.44722757974859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79286798-3	17.2157649533505	-0.909620952220657	0.684520881062932	-1.32884324990669	0.183899689904554	0.959296650155904	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80787902488152	1.40590822918039
Merged-chr4-63752823-2	4.03533417649394	0	1.3587496363441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135711058-4	37.804521786608	0	1.27867624984532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108387736-1	2.90703514066855	0	1.40880301387292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56713914-4	32.4170368690369	0	1.28356310637214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55353388-4	22.5215229342975	0	1.2752272754539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31597663-4	27.356963650158	0	1.28407506568637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63989921-8	77.6242122698444	-1.05443261048506	0.204963900585138	-5.14447962531368	2.68263364253404e-07	2.80479004808047e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.59453436625282	5.53838352888212
Merged-chr2-148468273-1	3.1849054327501	0	1.38290867643794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5539646-5	33.5012498144881	0	1.27621504292372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65693765-4	36.781522040201	0	1.27738945895233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33867089-4	12.8381325401355	0	1.28383693346439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25156002-4	18.7326746008632	0	1.27857657722896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103732671-6	29.8552313473779	0	1.28422847614168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132605962-4	34.1297651385996	-0.171250136547181	1.20530881430032	-0.142079884022578	0.88701690719639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	0.382164212378408
Merged-chr8-43443049-4	21.3250349148682	0	1.27681780684733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52185116-4	14.8027205824099	0	1.29495227905667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110602021-4	41.0715310739915	0	1.27650853045774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72106803-4	47.9325871859865	0	1.28101182749127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101761845-4	16.5079298959708	0	1.27873417705093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39004187-4	29.2199009388219	0	1.27580915857132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-95968804-4	12.4992719670722	0	1.28584850352339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143916703-4	28.4479210792096	0	1.28201128745033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-30873752-7	66.8535850848683	0	1.27472002239775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95850740-4	23.9260119556638	0	1.28661482712985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119157248-4	17.9479294177723	0	1.27785676528289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86824301-3	26.569644430684	0	1.27873598484472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90908285-5	99.4822860772753	0	1.2800105434344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165691680-4	21.465838099265	0	1.2837870280342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100081348-4	17.5638072095545	0	1.28153502479891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108850700-4	24.885111640567	0	1.28306835460212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3000081-4	13.7103547536171	0	1.3117283308096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46778302-4	40.3206100371819	0	1.27731264524493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145745497-2	3.62843888874552	0	1.4357637031499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64102122-5	36.2957607315819	-1.07518344000809	0.259983562561778	-4.13558237841517	3.54055572461332e-05	0.00138644753131139	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.57868617491971	5.46474741595992
Merged-chr11-51539804-4	17.0708815176589	0	1.29180629449561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167059678-1	4.98719341319762	0	1.3401810061872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134692649-4	13.7604059572309	0	1.29011601103777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80071278-4	53.5792133144337	0	1.27846323656183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48333096-3	12.2325527994718	0	1.29497152737235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62363794-2	6.84643640360095	0	1.32189433341957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99147103-4	25.2196614969957	0	1.28411024948851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130814874-2	3.61167997103875	0	1.39273796743826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39583398-4	20.1332203162949	0	1.28061752155176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55299519-4	28.78127519675	0	1.27642595229975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11463904-4	76.3201258086766	0	1.27973330627251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85913306-4	18.8391907399395	0	1.28461140135048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61057279-1	2.05233362983672	0	1.48505118981979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84103584-4	31.4956366786202	0	1.27880969645022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27008509-4	12.5671475821779	0	1.28245046719812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31615612-4	14.2029328311558	0	1.28155565733617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59562673-4	21.4104935947131	0	1.28316819121729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117830010-4	27.7872369385216	0	1.28765825094678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57930739-4	25.3020168474855	0	1.28841729416786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47645136-2	4.97228871276699	-0.592064153290292	0.812711744854308	-0.728504487647621	0.466304822570075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35141750544629	1.40264952818025
Merged-chr5-64239437-1	2.89455744844954	0	1.44399549306597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6109046-2	3.88385843404292	0	1.34225336270132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120145610-4	20.4222831885707	0	1.28283722177298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138776805-2	5.06968080091126	0	1.41072529983759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112762829-1	2.44283973567953	0	1.59376431429938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95729006-6	111.077447221779	0	1.27932532689924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37195239-4	40.7864288808731	0	1.27599180905636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27577816-4	16.9071334514339	0	1.28050662950783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11429390-1	16.5524293434927	0	1.28575454155162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124036874-1	2.50756640960246	0	1.37555065875216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-38728408-4	38.175932102029	0	1.27844640848602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73458856-1	3.92816424620696	0	1.37099787593805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4182069-4	29.0709098833396	0	1.29507025799512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108317708-4	20.2498257591208	0	1.27885197359836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140941064-1	2.99277938708461	0	1.42244206289089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130533521-4	28.2683771110441	0	1.27782064766142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86592840-8	54.5955837015654	0.180250387626095	0.224319981797414	0.803541379514204	0.421661889745701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02053556062748	6.18585773456568
Merged-chr6-121110331-6	45.3420172084181	0	1.27722700749597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137064104-2	3.91414593288311	0	1.48609082754876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167936050-2	7.01092765549663	0	1.3533206222267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140510420-4	12.2588286614811	0	1.28697724651266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96576851-8	71.7361842486454	0.812265972907082	0.217935831757554	3.72708776870937	0.000193705018361334	0.00532737715902345	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27203409328992	6.12859351228902
Merged-chrUn_JH584304-21087-1	4.55061309165989	0	1.4506602161917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-29026430-4	21.9453297601299	0	1.27966180544693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108690331-2	4.3401982326669	0	1.33812461482555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37223167-4	36.8330794622928	0	1.27831050966631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90225002-4	27.1067039261472	0	1.27702652560207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149790798-4	19.1206769578513	0	1.27972461522136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82822072-4	15.4821268891991	4.23624205677838	0.979983388522021	4.32276924935161	1.54082865170404e-05	0.000715106456493268	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.31776252764976
Merged-chr10-128345090-4	19.9418398195179	0	1.28421135608416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-53958-1	4.83446135788069	0	2.43325208830953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66135826-4	20.9287748643016	0	1.27728162314738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27728140-4	16.7899478422005	0	1.29045605671999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73598438-4	15.5556031402455	0	1.28184538103092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32343229-2	3.55956302974625	0	1.39696623973932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126872768-4	39.0403156957247	0	1.27567541471696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139781662-4	28.8697071544435	0.576031485961867	0.239799474629086	2.4021382317574	0.0162995478429295	0.159711903084806	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53176142544818	6.12317606216724
Merged-chr2-153117254-4	56.8860128724082	0	1.27904318292093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33918957-4	32.9288845952634	0	1.27999426160097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155122132-2	8.86375151655137	0	1.38080849404382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35752289-4	14.6984006540824	0	1.28217540252261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120116236-4	21.8507814907822	0	1.28276722627796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192078622-4	28.6979654065613	0	1.27806078924443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32507319-4	20.9974758086921	0	1.28807681027602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125749225-4	29.4445140989683	0	1.28579160543851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170953372-4	20.3599317078915	0	1.27984708563248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65818453-1	2.37349989685172	0	1.37955013807095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46640093-4	16.3290935566862	0	1.28269354202962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75922781-1	2.00376598494004	0	1.55744456793175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-37248721-4	19.436294995169	0.0681429609392544	0.263593906969799	0.25851493201268	0.796009526408503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49185149111899	5.53867082645443
Merged-chr8-46811508-4	33.3755600051015	0	1.27656711034052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-98662743-4	151.767969798731	0	1.32334177148166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3153877-4	35.6981261637858	0	1.28029228071182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165983864-1	3.22192580515972	0	1.33433187433449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5466996-4	11.9407957216331	0	1.28928732457025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97475774-2	5.28681503356285	0	1.37879621807501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5414590-2	3.29282474483768	0	1.96594325849436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99302257-4	37.0844660866858	0	1.27734412090639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97175224-4	22.7523126053001	0	1.29128931545529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88627740-4	13.7483378552569	0	1.27924974735918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66932790-4	24.1475210472818	0	1.2793197764977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53273570-4	49.890770774155	0	1.27645588965003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17694920-4	35.8722328223075	0	1.27673473496248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85437731-4	25.3719137110368	0	1.27653053439903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102886356-4	15.2869335101652	0	1.2944892245628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184530752-2	4.78004507436905	0	1.35639702431779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113626624-4	17.7592234153655	2.45638322204725	1.15739167418875	2.12234395393331	0.0338088649697537	0.280354563011914	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr15-103462735-4	18.2511695225418	0	1.28250371100064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-36335-1	1.79232935511161	0	2.11095178024588	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44546426-4	13.260206436109	0	1.28345239747649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34934983-4	31.2668715287744	0	1.27717927057424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69469183-1	2.48185185970474	0	1.58576320592607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14111118-2	3.46632700572185	0	1.39162556526079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53490844-1	2.6125905311637	0	1.46839608668813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139457145-1	2.81108212840666	0	1.32667197336599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97854574-1	2.78739798638693	0	1.4792148132694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91820520-4	16.3368377683455	0	1.2809455918723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61285551-2	2.80352655984319	0	1.39833814187493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8655551-1	1.56191647080629	0	1.75539911270996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130801105-1	6.01187471621785	0	1.36043655633551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69321450-4	10.7618098628372	0	1.28212185272337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30518018-1	1.64525521064718	0	1.59937360236482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27762718-4	38.1185955383322	0	1.28785832803793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98993217-4	23.095623144064	0	1.28236442780214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30997595-1	2.18537146992376	0	1.43529887250348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134730170-4	17.5769899016262	0	1.28390559004373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127635243-4	23.0481109416433	0	1.2807971688939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77793406-4	20.6180235698704	0	1.28608607449603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64619976-4	15.7886773608463	0	1.28155510179572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17921979-4	45.3136308574285	0	1.28002541033245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120881395-2	6.67682945556445	0	1.31208106590834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20736002-4	15.8893523947909	0	1.28099064583063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30608261-8	103.722073675697	-0.429793484385402	0.199251077751417	-2.15704471582135	0.0310021805057657	0.26309980354932	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60081288609345	6.17578688462774
Merged-chr7-80779546-12	182.689206553789	0.40380792618014	0.204112032010476	1.9783641473885	0.0478876412880938	0.359644386577609	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.33567242840172	7.7041776426649
Merged-chr5-29948280-4	52.6920393470916	0	1.27750921544675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99415224-4	33.0010922111279	0	1.27805878513982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103870524-1	3.47001361089208	-4.07069723711274	1.22966219768931	-3.31041910921722	0.000931563732295345	0.0180533835242977	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14868686993571	0
Merged-chr7-43392560-4	14.5072719924197	0	1.28089795290014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11725718-1	1.51296047127321	0	1.67012958493426	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21740579-2	3.69258730607954	0	1.42726656126724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23184901-4	27.6417164831218	0	1.27890811030777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95824430-4	25.1446444694475	0	1.28377049708725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120709443-2	3.56675583552525	0	1.39658822684452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152528935-4	53.4733346556496	0	1.27990439682803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66886980-4	47.2329427993064	0	1.27500864492653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4943409-4	22.5459683566068	0	1.28034816214067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47055939-4	44.2794200469588	0	1.28015662917046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100461179-4	23.9741246788972	0	1.2816126995655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87706326-4	26.0803190606758	0	1.2835337932583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-162977544-2	11.8917992558194	0	1.34216819608735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60836651-4	31.5882465893548	0	1.28255460851904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54807931-3	26.3164333798848	0	1.2807319874861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45950699-4	18.9942474533903	0	1.2788569738645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73461689-2	5.72007980438122	0	1.33538831404979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51938583-8	55.4273062639713	0.312554564490214	0.256160288154814	1.22015229894385	0.222407145813645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85082152864783	6.07246526294003
Merged-chr4-139214114-8	111.190037947013	-0.508322722302833	0.199227176808835	-2.5514727982648	0.0107268697292311	0.117097338310616	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.77373057592234	6.18746383966532
Merged-chr10-122853958-1	1.82024428343308	0	1.6239077856754	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27350533-4	33.6755305359964	0	1.2799499231879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22125814-4	20.1829715749302	0	1.27844290409268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120527247-1	2.52906821044429	0	1.37760497105116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59438604-4	19.3721361002908	0	1.2780187903762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38929151-4	19.9197133389415	0	1.28173237297415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14372871-2	4.27816969855208	0	1.34384536526186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3129088-1	7.31396269080811	0	1.3156384545577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79223644-4	33.5778913679653	0	1.28053802038204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75449091-4	11.0193252246921	0	1.29333709809816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120253970-3	10.8156300477335	0	1.29603672442118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78258423-4	45.7982157699764	0	1.27636653748058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172458677-1	2.6651811234892	0	1.37332051600605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16498795-1	2.58952240461701	0	1.42437705116278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71963828-4	27.988181482509	0	1.2864018134411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68275050-4	14.6783714147064	0	1.28248093018197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49313291-4	18.7269761986704	0	1.27825068419789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71041508-4	13.3077158871454	0	1.2905574906989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121796222-4	34.6228166039614	0	1.27710574458939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64211505-4	22.4043722324721	0	1.27849170913259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51422739-4	19.1273766824783	0	1.27791312161655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160335257-4	11.2451624101576	0	1.28801220517731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90641587-4	15.3336069265973	0	1.27925768551155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50366739-4	16.7188329736532	0	1.2867430390322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167319161-4	57.0066352572905	0	1.27589872706115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136140308-5	56.5805886408322	0	1.2743028138281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92482830-1	3.37314631763398	0	1.36200841826416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-44067252-1	4.87653173118062	1.79629803139051	1.12021647642137	1.60352759417442	0.108818221949812	0.661350030834487	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	1.57403368136583
Merged-chr6-38712371-4	20.7527244148495	0	1.28115553470775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31565296-4	19.2948838273043	0	1.27804935703082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87830179-4	29.3926795414697	0	1.27432368382419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36631071-1	2.03248054813709	0	1.54847154113197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145017929-3	6.85640497200099	0	1.32776444293469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87832283-4	33.0905881835643	0	1.27905867796768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65551181-4	40.0253278303323	0	1.28367288546866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3548100-4	19.0302084652518	1.90299836628012	0.561227177983849	3.39078084763544	0.000696938065234321	0.0142541830393746	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70950039067754	3.37721832140181
Merged-chr6-97431661-4	52.0659893717537	0	1.27687233994672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49462669-4	21.6572351005006	0	1.27772947479214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-64873975-4	23.9677465558724	0	1.28498649440134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-1235-3	570.771218873198	0	1.33826150806204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8663922-4	11.8922343948469	0	1.29447313206082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66620933-4	12.6168373487459	0	1.29311198065838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19417483-4	24.2644838390878	0	1.30844213206433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50170056-4	21.0206125295207	0	1.28084500591787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43355414-8	125.236814324453	-0.521599085475268	0.171210392475053	-3.04653869391292	0.00231492681796173	0.036293997800114	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.19790826118339	6.62443509586171
Merged-chr6-140548448-2	6.76697782638205	0	1.38801457976605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86885906-4	36.6748773513829	0	1.27833419424274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153319428-4	17.0323677807964	0	1.28554978936151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78105642-4	20.3595258723023	0	1.28079618332772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33745614-4	28.655619975382	0	1.27631343759952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20538692-4	34.2832629523719	0	1.27602300567146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94288358-2	3.93618167685152	0	1.3822013033435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66353252-2	3.42081703753936	0	1.45169776033681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10591294-4	26.8493838483485	0	1.28551283695396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38690756-4	17.2912672712098	0	1.28583491131602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12024348-4	17.2996856809007	0	1.28157098739224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72056781-2	4.25019424765793	0	1.40207707571373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77962861-4	23.2417485866052	0	1.28333752379412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77820902-4	15.2247495577348	0	1.28136432235371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154117625-1	3.14377232239319	0	1.35139831050785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41374782-1	1.80867618352775	0	1.5824714342471	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-49151659-4	29.7189781241729	-0.482355116579765	0.357014887484357	-1.35107843815309	0.176670307637064	0.931625074471561	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24882624979019	5.78147712643213
Merged-chr16-11001875-4	58.7371631571204	0	1.2760359006345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40404793-4	17.1582464954701	0	1.28621812522529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91972287-4	81.8334302275428	0	1.27418535414963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181257805-4	16.6339759242263	0	1.27981403313316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70969953-4	10.6646802258868	0	1.28675733880967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-49196626-4	26.8252220813697	0	1.28187807566129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73442142-4	55.1858318872207	0	1.27961092476763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36345219-4	11.6232881712613	0	1.29040527894463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36262033-4	17.8618276007601	3.10921624502641	1.07075628369174	2.90375717834361	0.00368714005268615	0.0516705669918142	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr6-3346070-2	5.47596372369875	0	1.33055901921299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78623676-2	3.89621092540935	0	1.9398720053115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16406195-4	20.0918492685289	0	1.27992551836746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33836808-4	13.5586453477289	0	1.28690477997649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96483839-4	17.7528400633031	0	1.27948678411696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110698574-4	26.0833947176448	0	1.28647596759597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37732520-4	31.5113444348385	0	1.28239326709396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95839708-4	19.6115467100335	0	1.28069318086927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5712087-3	21.1497946758589	2.56951457415079	0.601556691599522	4.27144209354321	1.942129604405e-05	0.000860409499182707	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.956714820747348	3.73712486364482
Merged-chr8-120619812-7	43.5204307903258	0	1.27510383980248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57216196-4	31.0146681777258	0	1.2829448932973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100204773-4	28.863968754487	0	1.27793360870549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145730664-4	24.0826280967665	0	1.29369154855809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107610198-2	4.3109287721629	0	1.38363487483876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-19857455-2	21.6076045337532	0	1.28398696301791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28665445-1	4.42546906664819	1.87793486641769	1.44293096389045	1.30147242897497	0.193096795880352	0.992996631810258	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40349448976951	2.48280189120016
Merged-chr6-120470819-4	58.9633277947876	0	1.2757481906555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120514447-4	45.7672990464971	0	1.28717605667484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31113008-4	31.4307636590055	0	1.28025054556342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21701998-1	4.00834432899523	0	1.3266912811889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55691253-4	25.051361106263	0	1.29175173056215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65319860-4	35.3051976634321	0	1.27448619529835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144213965-4	41.5168241386634	0	1.27562866092669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71338272-4	30.8125404829814	0	1.2752516477178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58481375-4	18.1440844191663	0	1.28391257936842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20418614-4	16.1294232569958	0	1.28673393200406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70446891-4	26.2612524143862	0	1.28056129003419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44952928-4	36.3997637759895	0	1.28093666403064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123722904-4	18.7306214669093	0	1.2996189338771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49801682-4	23.4415591181974	0	1.28360674360189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117417655-4	38.6168134142041	0	1.27560880185213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19958087-1	3.18003437550406	0	1.36414411167965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10533110-4	41.0996197214346	0	1.27534565279114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105703488-5	37.0452516292228	0	1.27313178874264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9149649-4	24.7652267596948	0	1.27802332469428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88118088-4	17.517640064393	0	1.2807974175108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62501115-4	19.0883984498817	0	1.30000657349642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87626581-4	60.7286843119149	0	1.27645574814569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42382260-4	60.8783410675832	0	1.28059790124027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90876691-2	7.89560222982792	0	1.29248498915142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86580535-5	31.6282175889002	0	1.27691638938631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80982656-2	14.3075253411485	-3.90642399354634	1.03136078685939	-3.78764060386844	0.00015208462319146	0.00441694301647516	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50605748574258	0
Merged-chr11-21014551-1	1.75897545866102	0	1.37934941670062	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8747940-4	26.4528189030471	0	1.2797074698187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18647056-4	23.5694007625829	2.42767750867768	1.16017652277959	2.09250701165834	0.0363931851882757	0.294836235967402	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr14-102833698-1	2.38328685152516	0	1.53629656507148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71344094-4	15.566979893415	0	1.28247331166585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37679013-4	52.5677733616129	0	1.27997439117789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24151510-4	18.4103377751381	0	1.28592706050336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52925304-4	30.556837642757	0	1.28069104155311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143081906-4	31.9669421634257	0	1.27664673186858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20031005-2	3.74634342135356	0	1.44090650091737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165771796-4	41.404193690349	0	1.27988493210453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37285834-1	1.94585049147846	0	1.40280151799263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28617630-4	38.4108001281417	0	1.27738269866612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170319396-4	31.4782851462675	0	1.27744359511281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119963267-1	5.56137339911603	0	1.30987772829306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159199120-1	2.81988090095341	0	1.38657092881677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126185949-1	3.30099698111999	0	1.34908071051117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67171571-2	8.01045916141533	0	1.3481327060786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5417856-4	13.6918005081798	0	1.27858302156212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60744758-3	7.19942157101175	0	1.31427606048852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58563667-4	28.1321991466285	0.811842606943535	0.666808397926502	1.2175050726236	0.22341210760952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42076575433394	2.05066483796074
Merged-chr2-153214896-4	68.4745549970865	0	1.27747167048989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69383456-4	33.1697688603311	-0.0400897365820355	0.480731270183241	-0.0833932366553864	0.933538866148182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29523463718115	3.48387788431554
Merged-chr1-21070269-4	14.9382623730688	0	1.28028805256805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110709949-4	21.3122172772084	0	1.27702772292941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160251835-1	2.69634533117	0	1.41761269098093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122561373-8	81.2592459522411	-0.912260087834748	0.207386176011561	-4.39884714294502	1.08827441198639e-05	0.000542030333274867	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.0016269615542	6.0866117864024
Merged-chr7-88054407-4	33.0817083732391	0	1.27573444016303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54970987-4	36.6606698898078	0	1.27890208622323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35222108-4	44.8652537253615	0	1.27683178600896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113614628-4	13.6212050499724	0	1.2898443415197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95105535-2	3.64176080182474	0	1.42799989756197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120009955-2	5.03142036322782	0	1.34333790183686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72458158-3	30.6343917577587	0	1.2950001138717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55227145-4	14.7333589672381	0	1.28761904647151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32355556-2	6.57691827186395	0	1.36063491694045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135620045-4	34.7177797096574	0	1.27423731917847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85497481-4	18.1095613116649	0	1.2818416083671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39761271-1	2.3606674531949	0	1.41998553675444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-88459691-4	29.3328421161105	0	1.27883988818431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122745937-4	11.7121084823665	0	1.29087052423914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118089392-4	22.4398653482008	0	1.27687460537612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30864826-4	40.4305079594133	0	1.28072045503634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23682950-4	14.319986392667	0	1.29561749672888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77442437-1	7.21362756550326	0	1.29582212440342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148487108-4	21.3579285914818	0	1.28328753727427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46899503-1	5.35633405917345	0.93954206349877	0.858409665659611	1.09451477666764	0.273729270198104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26353188638628	1.89082683942207
Merged-chr2-44992659-2	3.30265076062576	0	1.39349825022948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37620062-6	62.2179128493929	0	1.27576970966752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13258163-1	1.84530564219467	0	1.6437855180893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138258939-1	2.59942600052189	0	1.53592219527681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64668677-4	17.4986888867155	0	1.28258782645262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75300029-4	23.8754546566453	0	1.28282478204501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68362700-4	16.8748981624777	0	1.28754571208245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23918216-1	4.24074169169774	-4.08440807289971	1.05884094969494	-3.85743304891679	0.000114584050865125	0.00352358088839174	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91746899137811	0
Merged-chr4-63644130-2	4.01582911312277	0	1.5273205072162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13300355-8	71.7834485449754	-0.0817756529902702	0.200953428495488	-0.406938331943444	0.684053281660031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11719359241259	6.0853798254971
Merged-chr6-16882885-2	6.10365269165623	0	1.33689770060392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52895139-4	28.3896488184947	0	1.27626956969935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54149992-4	25.664037631061	0	1.27833261151519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152817629-2	4.9765207812702	0	1.38528768846583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83104147-8	80.4186029671543	0.584510253326975	0.185814096811862	3.1456722786689	0.00165705569710711	0.0280118414923849	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12859574434927	6.70828080276049
Merged-chr5-140116172-4	32.3407722640164	0	1.27881657089143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102860162-4	24.2273171039756	0	1.28009652947908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57407902-1	4.7194897644102	0	1.31090300627294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105615944-2	4.05628675795897	0	1.37815011491653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58761544-4	37.6311543151662	0	1.29406885115901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135644752-2	5.7602545717638	0	1.44233120381868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126725286-4	17.2039922845052	0	1.29123293559976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60946199-8	89.9900144712789	-0.408210299478071	0.190586289369413	-2.14186603259188	0.0322042639088267	0.270734572158265	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40809892173499	5.95268360315947
Merged-chr2-26493114-4	17.7848047068495	0	1.28272708268327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88651382-12	121.622091260735	0.165864790104185	0.212716316912387	0.779746436529835	0.435540139939417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.17367372934431	7.34217973788766
Merged-chr8-110363180-1	1.59265906382112	0	1.78799738227868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93405648-6	24.5127967483549	0	1.28577957003102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67828594-4	20.8760121414804	0	1.2904765785677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97107664-1	3.76708335163594	0	1.356356366114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20304938-4	30.5950133098243	0	1.2860810164726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20731438-4	39.9024757539464	0	1.27815884708816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191428252-1	1.42639325066293	0	1.63710106979229	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76588702-4	31.9667397415091	0	1.28018981296322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22811033-4	13.5350072881689	0	1.28015642541159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172398190-4	15.783656924586	0	1.28408474239355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126131929-4	54.0898545711273	0	1.27531815228088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103760919-4	29.6017090840217	0	1.27685212726879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43478339-4	24.9031803170561	2.01026203291574	0.579441017091568	3.46931261961054	0.000521791907769507	0.011346760068255	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0425828912036	3.30457403055127
Merged-chr17-29395601-8	116.944099507104	0.0696878953061461	0.206522476186618	0.337434920367577	0.73578906400454	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.43347468908092	6.51546680474564
Merged-chr8-103588916-4	14.4261150431147	0	1.28260734820986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43765397-8	97.9391044598472	0.687820044081685	0.22454069257692	3.06323115061232	0.00218960855073035	0.0347371110356945	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43762789275876	6.12663703948851
Merged-chr19-34500962-4	16.9804224715049	0	1.28659052681482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64100675-4	38.7299252510585	0	1.27738887312303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99341259-4	11.7808103656123	0	1.28627715660658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74313259-1	2.51888590042319	0	1.38140626818008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34958888-2	5.75309306251563	0	1.31307617899895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63131892-4	16.2930596090019	0	1.283346095495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19942137-4	23.287613809759	-0.563395171937764	0.629529639279989	-0.894946221407678	0.370815836767055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68325629553529	1.41926493179619
Merged-chr6-129216486-2	8.73717828317159	0	1.39083245669063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122991354-4	17.2627542732226	0	1.2834701839434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87943172-2	9.14133975099706	0	1.31529373551163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95192103-4	25.3861264723582	0	1.27898017035124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36985803-4	61.7985238534679	0	1.27602614233576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114229948-4	21.216089194587	0	1.28464198096906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67633336-4	21.03240039076	0	1.28030136121868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113484329-4	21.0436188180169	0	1.28449564627743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74393130-1	5.67233144166615	-1.22659617087164	0.937700634791509	-1.30808930415662	0.190843020841084	0.984824136451194	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65771649384664	0.733321818366247
Merged-chr11-32559026-4	23.9112053489802	0	1.28209337028483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11669209-2	6.06631163144483	0	1.41237742616449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57845315-4	18.0369937776203	0.730922330042784	0.768850321947309	0.950669212430759	0.341772321752149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.991619407088926	1.35032549026822
Merged-chr3-31216155-4	13.9398161888972	0	1.28688516097711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134144038-2	3.04175291820233	0	1.39027350099817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108902344-8	86.2252822871366	0.184497577533947	0.171489027244562	1.07585645856415	0.281991457582569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.98848176991204	7.21560829046621
Merged-chr6-113663532-4	25.0214367165459	0	1.2797983607588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126763735-4	22.3994915494933	0	1.28273329457293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88587555-4	90.0600705853702	0	1.28257451952422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88270707-4	20.3737391084611	0	1.28402307096652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145822187-4	54.5681307577515	0	1.27822628488559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54959327-1	2.57787020652156	0	1.4242377680654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85285197-1	2.4860101101765	0	1.38550638286793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102367296-4	38.3754367955289	0	1.2789319019106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102065859-3	10.8291385252853	0	1.28721366948163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56507826-4	30.5181167349393	0	1.28132000033112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43077784-4	16.9046828694847	0	1.27830623277232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-67826-1	3.06393769599041	0	2.4332524120076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50753828-4	28.1648191868048	0	1.28247585472007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110689521-4	19.9450004333823	0	1.29558759768541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73314083-4	19.0558658183395	0	1.29458429975734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62221274-4	15.8650405522682	0	1.29048338756323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123388621-2	4.06140072557832	0	1.36640555517514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80863535-1	2.64546362984508	0	1.49871835947444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41521479-4	27.9775792232598	0	1.2793977352447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87637664-4	28.2393541773885	0	1.27709776999123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117860515-4	44.9144681305183	0	1.27687561783554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97449927-3	43.6138122254455	0	1.27713330410231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29245924-4	72.1959772357069	0	1.27904879950275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146248924-4	12.9044166573842	0	1.28759174194133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75141281-4	26.056675351682	0	1.28439989600233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79112033-2	3.35609333472866	0	1.45794342974245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14350889-4	42.9145788698533	0	1.27910172186675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39006429-2	4.39323272281785	0	1.44258211576536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88712594-4	42.1489853496595	0	1.27693769425206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110600184-4	22.1889339445899	0	1.27628901711457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34187749-4	29.4958909028353	0	1.27851157797226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55457785-2	4.25834409522371	0	1.40428371773933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45288639-4	13.1131149124379	2.81506949941258	1.12961988705387	2.49205023005968	0.0127008074438527	0.132889007914289	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr2-127346503-2	3.64589014219181	0	1.3479380543386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75086903-4	55.0549691110068	0	1.3622250189514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132944924-4	15.5612035617933	0.441773933094207	0.545895214636259	0.809265077343772	0.418362689277372	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56896660481674	2.34310688897156
Merged-chr2-165852679-4	22.7188235355703	1.77329457196188	0.615945070455532	2.87898167713302	0.00398961512848062	0.0549431802288081	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37786634671167	3.00752299433723
Merged-chr7-31156457-4	30.0873891048401	0	1.2882935575922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-89159433-2	4.57427923454209	0	1.70674150277232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128489625-4	28.4388082252804	0	1.28051654757793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75045329-4	33.4011264162034	0	1.27549357772112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85562667-1	3.66125707004625	0	1.36472085522022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87406579-1	3.21094298948662	0	1.33474841587858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28513258-1	2.4432016307269	0	1.44856317569108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29462648-4	24.0399332070542	0	1.27932867458713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33101824-1	2.31645817282011	0	1.45895861152768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21406979-1	3.33482498420288	0	1.45044689306971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-17514251-4	21.5411551003446	0	1.2780352445671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57864470-1	2.1505589334411	0	1.42100063646878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73133203-4	14.3792628302723	0	1.29535533114404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4427457-4	17.3444393372738	0	1.28323588960306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75685613-4	50.4916480547611	0	1.27671620467254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35056809-4	17.420857099608	0	1.27994992605878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28525341-2	9.18121478410124	0	1.32147713772627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30602968-2	5.25399903487312	0	1.45812500379823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34198255-4	23.333087579453	0	1.27568218455137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110732783-4	37.8912490599973	0	1.27722583522053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57536776-4	42.841571564391	0	1.279360562026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76400170-1	3.97795281593664	0	1.41530047902908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130919909-4	14.0553364057086	0	1.29196994781097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120134588-1	5.66827498847926	0	1.34607837280348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29488230-4	25.1567486734486	0	1.28177137335913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75720788-4	28.0247164512614	0	1.2956307310634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37419772-4	15.0124275166065	0	1.27766655387158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120866899-1	1.77323924136586	0	1.49864038417571	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25883570-4	36.8149365153142	0	1.28310451277564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43511208-1	4.04095504405174	0.151515870459652	1.16361380744205	0.130211475225381	0.896399115959912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736070423127282	0.581381506691384
Merged-chr7-43466536-4	15.8640393999796	0	1.28153820820446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66990848-2	4.4763329542136	0	1.38497928955597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61340303-4	20.9379095058392	0	1.3208679018409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32950996-4	20.5814285500368	0	1.27549879725768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105627298-4	12.9595055468021	0	1.29446076931273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44818775-4	11.5300990972634	0	1.29159991089047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-108185457-4	24.8882897344805	0	1.2771246860542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40304630-4	15.3867409159665	0	1.28416264499293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46834042-4	31.0859760631347	0	1.27304913291731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122556843-8	58.7554867031502	0.241386184882837	0.216416258449024	1.11537916149537	0.264687975509602	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76948610736459	5.98585056485586
Merged-chr1-165433078-2	4.41783035374034	0	1.37435770736033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39413506-4	20.1609914627242	0	1.28875068236102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117861066-4	57.6056194598687	0	1.27704180745175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100053384-4	18.9611638890106	0	1.28837976046813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91024138-4	25.1811622630559	0	1.27647819650928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37355797-4	11.1098888493318	0	1.28164891667381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142459336-4	25.1932225438208	0	1.2765479407721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117526349-4	20.0363065062522	0	1.27936884075238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180387664-4	73.1145576398776	0	1.27990921221195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152741795-3	35.237969385131	4.31421068450648	0.940513423541372	4.58708039302823	4.49487629074801e-06	0.00026629391305097	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.62606662475342
Merged-chr13-113435336-4	23.983348244602	0	1.27946490235703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91964642-1	2.48812032940392	0	1.35039447497195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107317922-4	93.3752158948614	0	1.28157798263153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51734410-4	22.2263373069718	0	1.28393303762522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76048314-4	16.1982230295981	0	1.27800850616758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24736019-2	4.90193372498795	0	1.36949934185365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87542194-4	45.898733575608	0	1.27699371815616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30929071-4	22.0424203231488	0	1.28378637104397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115555757-4	21.1952265969293	0	1.28778508161661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41323510-2	3.6012519555099	0	1.35113168646495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3301306-4	20.6562603004805	0	1.27895635494264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91740394-1	2.22106982667401	0	1.38482068388732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40991920-1	2.56448644694237	0	1.57164860851412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20640965-4	33.6132107213645	0	1.27717531860664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73008248-4	30.9702453707741	0	1.27596315329533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118763001-4	18.8344238997904	0	1.27633553083879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6492634-2	6.43912125965197	0	1.60890160684456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113781063-4	14.6484622961672	0	1.28556056038199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46286992-2	12.0886576162112	0	1.2899230639631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82462184-4	15.8956809075484	0	1.28878973679192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10979989-4	18.9345977286423	0	1.28347162233864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162625526-8	124.992521785489	0.285692930496022	0.123911803885721	2.30561513541925	0.0211321468100792	0.195373693470775	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.35795640934966	7.63542987560718
Merged-chr6-37615294-4	14.458358222671	0	1.29220149439997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16191237-1	1.73031615547937	0	1.63561504179979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108743372-4	16.1870400810896	0	1.28226732771576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34655813-4	16.1897461375839	0	1.28293124728406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143038743-4	13.8352103071614	0	1.287439620697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88595691-4	49.7608691274357	0	1.28337670044832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70967810-4	32.8091584367005	0	1.28363078812881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117818733-4	42.4162411613614	0	1.28468523258941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23630864-1	3.46271244936299	0	1.41209483399755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73566720-2	3.09694315699291	0	1.40896740689816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30085188-4	9.76567779166482	0	1.2886276635199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12375771-4	31.2724277307813	0	1.27750065668097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57722557-4	20.4498345631027	0	1.2761480253065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8939177-4	12.2522515518285	0	1.28523501144259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84995701-4	12.3171942036301	0	1.28567537627852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13299361-4	14.4840146551172	0	1.28207568514021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8346566-3	16.9504528319938	0	1.2999604416164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60913520-4	8.22808029180604	0	1.31461806524464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118810908-1	8.8500901706103	0	1.28517476567702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36948116-4	15.438356289509	0	1.2899356904463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105041748-1	3.96156962382936	0	1.35371797281933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64092360-4	45.6214648768757	0	1.28152633230887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36067940-2	7.75198042647236	0	1.30465157382997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95677740-4	50.0707048549412	0	1.27403456429534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4302892-4	20.7023414145771	0	1.28341975071254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76194704-2	8.51092846619609	0	1.29903044251513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103549679-4	18.6266156987411	3.46806058992845	0.919626123914734	3.77116362806806	0.000162488078703795	0.0046529123536276	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.83977088234384
Merged-chr7-16313639-3	12.9191024678295	0	1.28135328932534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8143170-9	101.513797001595	-0.410155100413774	0.191697755055893	-2.13959261178716	0.0323877042213146	0.271883666355979	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.69113802534984	6.28761539625684
Merged-chr14-54770588-8	74.0831841815531	0.0642979131808635	0.205427889909182	0.312995052469697	0.754284421001297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12447683375484	6.18841303175881
Merged-chr7-64141489-4	31.8870495658985	0	1.27916525870707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132494743-3	41.6725664011352	0	1.27558598936425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36560395-1	2.24609866062969	0	2.35008731071508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75960867-2	5.32651940685662	0	1.42722831879902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47294184-4	17.2264524909168	-2.74572652003346	0.563216618664427	-4.87508079314933	1.08763931627401e-06	8.57332675045136e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81237727758432	1.89200393807192
Merged-chr4-32239125-1	4.29558147249813	0	1.32108576207783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117872327-4	26.5651476810504	0	1.2818089316293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98249858-4	18.8585096833683	0	1.28303020547243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77800267-2	4.54367398423499	0	1.35105111881354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46788531-2	3.50345083213365	0	1.35872648694028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114907799-4	39.3131168857332	0	1.2760027875205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3781646-4	28.6681244991175	0	1.27604698945439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75297199-4	16.7048742364562	0	1.28473351128174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21200942-4	15.8401596607102	0	1.29618958463651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59739377-4	16.9176692293992	0	1.28853002293847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100112427-1	2.48370896654617	0	1.48677119017488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58847147-8	76.0153841678814	0.410946535074324	0.192275630945946	2.13727830746192	0.0325753621451048	0.273046384650336	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05836275074513	6.45304207229586
Merged-chr16-30442626-2	2.69238821654646	0	1.49725447907165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3834614-4	17.6166712454653	0	1.27918060331859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51729071-4	41.9271709039686	0	1.27718466036423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93214383-4	33.4811667874136	0	1.29389011544621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149949506-2	3.98683310943303	0	1.3306765479856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191334661-4	42.871458996837	0	1.27746395048222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176797453-1	3.53294035400555	0	1.38957782923715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102976394-4	22.4761819151882	0	1.28612800563729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97511440-1	3.60906206191487	0	1.35418855018254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8854210-8	108.18943220435	1.03035861157702	0.256540993637101	4.01635074757118	5.91062675502452e-05	0.00208663325734107	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9841970650569	6.1785017476721
Merged-chr11-121804835-3	6.65958082227109	0	1.31740806075584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81083480-4	20.2297488737315	0	1.28639644658107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120119147-2	8.40689600176824	0	1.30492106638549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124647892-4	13.7599741307525	0	1.28109443129752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34257802-8	88.3379462773548	0.969735699732371	0.238228467568182	4.07061217171633	4.68897562375288e-05	0.00172525788913151	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43075410313418	6.40891820688914
Merged-chr7-28709682-4	11.4992061313698	0	1.28663171181494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34489983-1	4.03514108219665	0	1.47213531606393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-35293-1	2.35719090364337	0	2.00211080716501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96537003-4	11.9351783237257	0	1.29123222797393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-4867738-4	21.4689938918581	0	1.28867568370924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30487756-2	4.19105881166259	0	1.37553141703129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45236339-4	41.0922172366881	0	1.28268065414249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135726139-4	27.0186171066611	0	1.28386567335046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90885980-1	2.55190576225261	0	1.39103894286847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38775583-4	18.1698186827469	0	1.29888479383797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20064443-1	3.02510014089688	0.745128335833039	1.2081069635907	0.616773479740892	0.537384146808516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911455188998607	0.900948542443349
Merged-chr2-131258947-4	20.0120757698494	0	1.28263568507101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115635691-4	19.3305103224073	0	1.28453560273247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67713247-4	19.9676899102013	0	1.27985715862374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29794793-4	32.405511785914	0	1.27723873811129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97777437-1	2.60076825269392	0	1.39437919020035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33194001-4	18.2590020053361	0	1.27700987232498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75789586-14	150.382602898826	-0.767476245928951	0.174866881106706	-4.38891710695421	1.13916476419702e-05	0.00056351143589113	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.79183075352006	7.00117382099949
Merged-chr5-66067372-4	37.9089614650364	0	1.27987377233041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3727794-4	13.6019723719113	0	1.28838278646419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31926761-4	57.6501146950487	0	1.29013911910725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60903705-4	18.5967296873772	0	1.28046687057634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125358441-8	85.3630664357336	0.240933521958224	0.184672503267878	1.3046529271807	0.192011057138875	0.989211174692285	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93460689783277	6.16090680103165
Merged-chr3-79587012-4	17.7914277947453	0	1.27935328104302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54801970-4	20.8774729686413	0	1.2775253692683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145101100-1	4.26318837830309	0.0783197636729248	0.886043317045526	0.0883927028918617	0.929564560844367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82143157345512	1.48233004913473
Merged-chr1-94582212-4	27.7058689207975	0	1.28158532315599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142403802-4	52.062830733576	0	1.27423731173167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62629683-4	21.8566034482641	0	1.27616640397319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59578617-2	4.39529918057283	0	1.33942101612702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120142751-4	34.3751500219736	0	1.2791069772571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6747024-4	54.8415368689213	0	1.27630644980901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169994438-1	6.80032540799122	0	1.31653201377762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127472256-4	23.4806944206324	0	1.2765888443391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155054874-4	21.0287452433155	0	1.29097592001273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91719248-4	59.5106188640606	0	1.27473812582151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-200-3	324.1249212434	0	1.33380909992521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27218818-4	25.9471937012343	0	1.27640325427599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184480820-4	21.9502220948442	0	1.28248892582316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3996436-2	5.2233727346201	0	1.38185559616334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13423619-4	27.2554937545836	0	1.29347560850561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60769581-4	24.4375794293388	0	1.2898341420035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90855951-1	2.65085277074434	0	2.11822442931699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50872820-1	2.62808092314476	0	1.44051472940849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106623827-4	20.1926775678432	0	1.27997559175353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-20557684-1	2.91633702247785	0	1.35579614353205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95291324-4	14.7637899220781	0	1.28290386407937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16047543-4	17.051989217431	0	1.28573068079805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61540039-4	12.6951565791252	0	1.28461125805583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17684039-4	16.8306657517269	0	1.28448784581789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58520482-4	29.2157936751354	0	1.27635299440004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55868515-4	36.7887594854236	0	1.27667883340074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21318411-4	25.2610208626387	0	1.28403146453338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122975163-2	5.0291370421395	0	1.79821429550096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-15201713-3	19.1087673102706	0	1.31375087083582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76152700-4	25.623885212626	0	1.27777100521307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13981490-4	16.2995999840437	3.13806045328727	1.07741996615899	2.91256942682665	0.00358468504167221	0.0505055689377128	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.898163539755574
Merged-chr11-89021060-8	137.301559700118	0.871776731506882	0.189338608396025	4.60432628554792	4.13803256537876e-06	0.00024968040260133	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.15328058896372	7.01510582302363
Merged-chr7-125621903-1	2.73099387954076	2.4110632037946	1.29803732595413	1.85746831434321	0.0632445551164758	0.440835966390471	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.869764003783424
Merged-chr15-12052384-1	3.14276454882583	0	1.35850481654609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122573612-4	17.4787742229064	0	1.27599804150798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40846762-4	30.8923718601434	0	1.28064454221211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-28941282-1	2.33079001704283	0	2.354008921539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36711977-4	56.1670758760295	0	1.27814599303081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145019624-1	3.31580041696785	0	1.39390511813451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119809142-4	26.1349986878984	0	1.27567735983697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127323132-4	24.0073174281872	0	1.28872018426299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95955897-4	35.8413961711789	0	1.27719758929306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109191609-4	29.9127185591189	0	1.27761083960957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51915371-1	5.95552695933005	0	1.31815402182391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25958872-4	17.2168749499372	0	1.2796326878768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44069317-4	14.0874614774715	0	1.28340124677443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54810317-8	99.7286158743633	0.396865947117539	0.188822726339042	2.10179121344188	0.0355715691715872	0.290627810821741	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.7759324554484	7.14508680080961
Merged-chr6-122570957-4	53.5292535502902	0	1.27900630460293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97946071-4	15.6337790659038	0	1.28991826612366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128661327-4	13.2146360498213	0	1.28400856511869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60395786-2	6.29122611984946	0	1.82836374455995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138940588-4	28.5349182825965	0	1.29190127188412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43353850-4	31.8144536574226	0	1.28166801865392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89258344-4	28.7777007474032	0	1.27660397873642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96477445-8	70.0213937669944	-0.127264482845577	0.231731388639775	-0.549189661325545	0.582875298728538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32835832003322	6.24262524843328
Merged-chr11-20301553-1	2.70398765791527	0	1.36586679731362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24891698-4	31.4781318630936	0	1.27777856384738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53274237-4	45.0048215211651	0	1.27935368616652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99430860-4	23.4585259214574	0	1.28142755429856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126611030-2	11.8094326525765	-0.652416178128002	0.516680036938805	-1.26270831362752	0.206694025180438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94039543535233	2.58318860889476
Merged-chr14-103978983-4	14.2143406693629	0	1.29010828066954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21608605-4	18.6518387418798	0	1.29639276656928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24698872-4	28.0556556742443	0	1.28182994810198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42924922-4	35.2213179325999	0	1.28398104172969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80172921-4	25.2361160171733	0	1.27715196449583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52600514-4	47.6395768595641	0	1.29595815821033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139228122-8	53.4794309433357	-0.725898369665323	0.260088866734366	-2.79096286888242	0.00525515005619747	0.0677457162304755	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.29147861011324	5.52913284086889
Merged-chr9-41130731-8	59.132178225585	0.468009599956052	0.232641474973812	2.01172039512187	0.0442494194460791	0.340059104213041	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10234193346666	6.64761945324013
Merged-chr13-47226036-8	104.923238935417	0.706611819083775	0.170191695673083	4.15185838703369	3.29786316761367e-05	0.00130765877761458	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52351270680684	7.25112708542418
Merged-chr19-3360060-4	26.8019705128769	0	1.30241044955562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151576258-4	21.129097860946	0	1.27627423380146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99331357-2	3.05911861321955	0	1.87424299219704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37875148-2	3.71591830904425	0	1.42385479559674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85306629-3	6.14370121221002	0	1.30884695448997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70913186-1	2.10898406982983	0	1.5120087186955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19201499-4	41.307893719386	0	1.27459419099238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85455416-4	129.850900138517	0	1.28265830255155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145260242-2	4.04902570724739	0	1.42006677661629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112517184-4	25.2746925828427	0	1.28577570804213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59338638-4	46.1275569588922	0	1.27925622299502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75788719-4	12.8936510030187	0	1.29537214692237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38144300-4	10.6890036762962	0	1.28174762110185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7063152-4	28.8205252486711	0	1.27970261919896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3029453-1	4.49681351550249	0	1.47937416718859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-112256184-1	4.01822040718949	0	2.34135267224615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50528687-4	13.6311949216864	0	1.28905009974171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70939291-1	2.60812949058972	0	1.38162740351844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142695931-2	4.37224591735705	0	1.8082736549206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10550321-2	4.01381077717755	0	1.38946143715339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5506008-8	53.312303875826	0.620367842369973	0.19679282193827	3.15239060174953	0.00161939489690475	0.0275074028939791	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48629131254411	6.06268772996639
Merged-chr7-107748135-1	2.09442007383034	0	1.43367961497951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91061772-4	28.5250967580004	0	1.27512531103461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64830223-4	16.5396583924199	0	1.28060545970003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90574705-1	14.994343610547	0	1.30657424938526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80762613-1	2.17682687993863	0	1.55038060233244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135758978-4	25.8934944073793	2.81269188469908	1.09863549945126	2.56016839625513	0.0104621454542401	0.114881424441737	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.07938469868934
Merged-chr15-66814170-4	26.0333777727731	0	1.2806756948711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34148195-2	2.812694504508	0	1.52123249130009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140537843-4	23.9156795045262	0	1.27580145301227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33770042-4	20.0343167833255	0	1.27797431414804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75047303-2	8.80739113525534	0	1.32476769132549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82996911-8	95.7902258548744	-0.291960842999682	0.234025424259621	-1.24756036197071	0.212192102010704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95325687147118	5.65197557997817
Merged-chr4-150656044-5	25.4658964873375	0	1.28593622673101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47744160-10	82.2201595422154	-0.686559360600729	0.184410650773286	-3.72299190812348	0.000196875834076675	0.00540321220225719	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.69369624853472	5.9870186927446
Merged-chr19-40684206-8	82.6474260008616	0.943744762655568	0.249245257136306	3.78641011467455	0.000152839346588099	0.00443098489003812	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08066071726019	5.97282946036647
Merged-chr1-125473405-4	30.5724961320383	0	1.27307981311496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65735214-2	5.1258754374439	0	1.33812398729068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46774836-4	18.2235963566815	4.06079618757685	0.993076144345931	4.08910858517441	4.33034117818703e-05	0.00162626709557362	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.98439646562239
Merged-chr4-107224792-1	2.35789236654914	0	1.44164983087783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64458899-1	7.34310031213073	-0.938431784533326	0.969467057434059	-0.967987284701684	0.333050720042291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55179515598278	0.581381506691384
Merged-chr1-138348670-2	5.32125884035591	0	1.36534728540324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132364538-1	1.96176926717287	0	1.52427174005447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11425907-3	7.03066106169632	0	1.31654563481969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77284570-4	35.5927150564037	0	1.28659530700081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16467283-4	28.9382359548517	0	1.28486986921607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84420695-4	38.1834252136199	0.420067921455192	0.22539947860748	1.86365968568506	0.0623695101609713	0.436172732339344	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07567540147992	6.4626248667504
Merged-chr17-74523541-4	33.6505095370057	0	1.28165088392866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38844216-4	11.4596623709673	0	1.28811353566856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47228445-4	30.7414508884576	0	1.27868295091409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24383634-4	29.6520568744837	0	1.28155607958517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127278898-1	2.81840556522855	0	1.41505105337688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23874293-4	19.911621103074	0	1.28833428735127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86124350-4	18.5229854002334	0	1.2849708331596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83645636-4	30.3211539998394	0	1.28108744227714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40557937-4	14.5209868943773	0	1.30409134796467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45088806-4	21.607940469254	0	1.28149813801207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58136310-1	4.54122117276828	0	1.32178467468108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127270458-4	22.0195347912908	0	1.27925258613753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115900268-4	33.4071038670182	1.86497186566373	0.439281963706774	4.24550065731499	2.18105869569938e-05	0.000941692773132418	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.181524550194	4.22101576841686
Merged-chr13-19371221-2	12.8001216679726	0.000324367575348856	0.809024499518949	0.000400936653391494	0.99968009884297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1351999899511	1.0995156753045
Merged-chr18-77946973-4	18.5296113669415	0	1.28276512715473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33083594-4	13.4986555074859	0	1.28366948390779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62721528-4	14.7819482320962	0	1.28302174665375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8327002-4	8.91310259618273	0	1.30875619675481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81401885-4	31.3585198183934	0	1.2801037218215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29442235-4	14.6484069215352	0	1.28142405694246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112265676-4	36.8358605181874	0	1.27882132559808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141871168-8	125.126711456646	-0.456598560382278	0.175086758459793	-2.607841760273	0.00911150641312619	0.103206881274423	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.35576199283636	6.91477262395092
Merged-chr1-88652810-4	27.1362381648448	0	1.27680720963497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5445032-1	3.11942355787153	0	1.44785184790075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11673231-1	2.09290458917196	0	1.49271677035374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108914239-1	5.78244323997074	0	1.31135440237475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31376539-4	25.3492292608452	0	1.27961089725471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60274082-4	17.7572373315863	0	1.27791759604936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132009946-4	14.9815340810357	0	1.28169172069673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29185800-2	4.41235301036964	0	1.75224805125949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89262541-4	27.9306527769161	0	1.28344076221874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16964178-4	18.4468477296321	0	1.28090914290785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47035193-4	29.0561361296262	0	1.27508231480203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29993211-4	13.6531185096696	0	1.2854772612764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11461105-4	60.4284519297313	0	1.27831274325996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15846136-4	56.4500077671651	0	1.27770253249967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125573395-4	26.7152991232092	0	1.28208129898033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181232481-4	13.697353865719	0	1.28740032168521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117340433-4	34.488281444314	0	1.27717767295107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118522280-4	19.5736640234373	0	1.28350442193054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30628809-4	25.0912269463253	0	1.27806906963173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164081997-1	1.6366820767514	0	1.77886883085094	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119267093-2	4.56712955558818	0	1.80972056878762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95232702-4	19.0701868278589	0	1.28214096857033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43137978-4	57.6971315778406	0	1.27991139426531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122509737-2	5.19449827323158	0	1.85683783067982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22200428-1	4.45877854527587	0	1.3357437480989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125345775-4	15.020259689695	2.30286234495642	1.02373516262051	2.24947078994695	0.0244825592026238	0.219185821846096	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	1.20440436174322
Merged-chr11-97401901-1	1.96515306993937	0	1.74427732441203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37955636-8	69.2093907289846	-0.478094930585815	0.20920649408565	-2.28527767589318	0.0222965510788394	0.204031707995776	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39803355996724	5.95509370961554
Merged-chr1-82798514-4	16.1288561099516	0	1.29466980439143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19832012-4	15.0251223126542	0	1.28208344903264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8518448-4	30.8362537011404	0	1.27766282316765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55505719-2	3.49761324548264	0	1.38856865221873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14244836-4	11.2254344701925	0	1.28782613978451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90833779-1	6.28421554139309	1.05404095483543	0.761859862661345	1.38351028383806	0.166508456265584	0.892076869978754	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18875562771358	2.5003686806946
Merged-chr9-118868921-4	12.5061903996797	1.31558715837505	1.28990902433999	1.01990693417173	0.307772600603454	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr5-120605854-4	10.1076970033063	0	1.290237738979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73607711-4	26.221301402882	0	1.27639816980503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82906212-4	21.2182143065182	0	1.28246098361051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149765383-1	3.9302770383236	-2.88111461633348	1.1441212110892	-2.51819002078519	0.0117959663005194	0.125765902084147	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79727543454951	0
Merged-chr1-131943026-4	19.6133375011676	0	1.28543966024037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53328252-3	5.23687350164974	0	1.34161814679948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141273016-4	26.5237886690605	0	1.27419928897633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62329101-3	10.8207225139555	0	1.28896312895037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53312134-4	28.8344898619536	0	1.28283003218684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163251857-4	28.5590943810245	0	1.27481569577216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152796963-4	34.5815977111049	0	1.28161103986817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29383610-4	36.9066819519218	0	1.28384594331286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55805483-3	11.8031934996994	0	1.30832533156209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36879868-4	20.5339465013353	0	1.28034261927781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20915261-1	2.34105495461961	0	1.54719051310618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120666682-1	2.98635464980238	0	1.39420757791055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65881799-2	4.7766608890583	0	1.39679976552048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75683091-4	24.3475715008136	0	1.27931776098654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92791647-1	1.61639345177874	0	1.50973900239122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91412528-4	42.4542609387888	0	1.27700735091461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75185963-4	20.4170338030437	0	1.30008054653872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136185549-8	67.6926795270768	-0.794433720890413	0.217368055862647	-3.65478596998819	0.000257396617209255	0.00663242876504572	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.84763237614367	5.93117024144082
Merged-chr15-58019772-4	27.8627668025004	0	1.27725207278808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84583569-4	19.858369677973	0	1.28150707393528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47022713-4	55.884719430923	0	1.2766235777025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76537658-4	50.4111465874241	0	1.28431290932633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129234114-4	21.6461934885026	0	1.27901018560033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114834819-4	17.8708213404377	0	1.28237989392418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160067010-1	6.12563413566828	2.01833058377861	0.874280839914417	2.30856092417189	0.0209679584165382	0.194405818769453	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84549803888929	2.04403056204475
Merged-chr1-136141722-4	72.2440264650669	0	1.28062728608212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95318963-4	11.6855110138263	0	1.29081303879821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97992530-1	2.52702240234542	0	1.34416237651254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75689103-2	4.51532052034663	0	1.33317397934211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8694293-1	7.84914326854142	0	1.30325713842234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9334995-4	19.3659842461406	0	1.28003029409117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100022719-4	18.3065467118557	0	1.27611589193068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17857480-4	42.1492336287057	0	1.28018050993541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65140663-1	2.89448084906659	0	1.35772263720167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69244873-1	2.86483881076043	0	1.37201037121813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-50560-1	4.48099425639569	0	1.52916656625368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108856129-8	73.5212056705934	-0.350578925909173	0.237994117544488	-1.47305710547085	0.140735638327333	0.79226018469863	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17319961405424	5.85599144923154
Merged-chr16-57569151-4	17.3132819723339	0	1.29026401752826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112280344-4	32.7733852197944	2.86745825107813	0.984071652366797	2.91387140782034	0.00356976918577843	0.0504079769995946	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.55248074938811
Merged-chr18-80224481-8	105.657855501657	-0.697733246477628	0.147113056675093	-4.7428369870569	2.10745850009399e-06	0.000145883456723667	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.78214322768619	7.08031957861596
Merged-chr13-45903754-4	29.0087869655532	0	1.28105186764052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136142873-4	27.4321106852931	0	1.29757086072747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36538810-4	12.7443050423593	0	1.29279252382124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21041570-2	4.78816706755614	0	1.33193679467097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97857899-4	16.4616371662141	0	1.28020157011766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39378475-2	6.05195736626084	0	1.4134834189795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27690275-3	35.2122667377447	0	1.2753118182237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124259365-1	3.34839190957551	0.937578961796816	1.22239875928244	0.766999274727003	0.44308194674399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857496028466807	1.27911570690487
Merged-chr9-53703198-4	10.0843262811461	0	1.28656363014021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19777585-4	22.2438084070682	0	1.27733924103792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45487932-4	28.8351892836849	0	1.27928522664485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81751326-1	9.17804066628007	-2.92377568274141	1.0703033264707	-2.73172624099235	0.00630034675282782	0.0778118425458867	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52626708272034	0.420961122473315
Merged-chr16-24495689-2	5.73151602594356	0	1.33591680639859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44657208-1	2.06244682449661	0	1.51982636693298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36508431-4	15.3406016254329	0	1.28266600128139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60115365-4	44.8855546954867	0	1.27713562439278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37112883-4	14.904606378029	0	1.27996864562217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120257134-2	11.6793500594797	0	1.3172160763077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38644376-3	38.08897589	0	1.27750076800741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191875904-8	79.3727260520034	-0.81752066984784	0.230120064089784	-3.55258318339802	0.000381468387685331	0.00892816377567538	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.69927313197844	5.82529910622323
Merged-chr16-91001302-4	26.796447495949	0	1.2815235234568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3895656-4	25.293110118258	0	1.27756429279821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115307647-4	16.4361871418806	0	1.29677743422568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-14823403-4	12.4021094024694	0	1.28477625681035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62855649-1	6.22860752921626	-0.980739046301042	0.782893419014532	-1.25271080645377	0.210310971750664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82363421806971	2.65588440136773
Merged-chr13-51996423-4	12.8723659944472	0	1.28823999013472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120436065-4	28.1828135432251	0	1.28239246607979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95673897-4	38.4308453554632	0	1.27792920294525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124498363-4	15.9993297641828	0	1.27955439560595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145214612-4	12.8340026244835	0	1.28829151268062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35495645-4	30.1460789362211	0	1.28117633943449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79278771-4	35.3724163283376	0	1.27680242078001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67481936-4	48.6293389462102	0	1.2771960922438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121603018-4	13.271243733535	0	1.28017839247147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46886072-2	16.8313144514673	0	1.28566152245192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52046647-2	4.399631116036	0	1.34140389440992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84412760-4	18.6416625592516	0	1.28021032027749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34307259-4	14.7131777043026	0	1.28577914783349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60733902-4	14.7303416460703	0	1.28557725579503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62720168-8	82.0366450722935	-0.376126095215529	0.211732905852104	-1.77641776417245	0.0756640852830772	0.504321422788833	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23815257141705	5.88700081444922
Merged-chr6-148578281-1	5.64741956669956	0	1.3375734982525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128200729-4	96.6908345928569	0	1.28288755532677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113647381-4	28.7391197127254	0	1.28275461465366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131760201-5	24.330451207147	-2.39459403457984	0.368990350484542	-6.48958443340149	8.60734585635858e-11	3.10748962613043e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98012640041797	3.65364879963587
Merged-chr8-116946540-4	15.2958342918498	0	1.28389276987212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167484047-1	1.44210691463957	0	1.5376220947435	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49197004-4	40.9671106708988	0	1.27718849063438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23135971-2	7.47283911498522	0	1.30117169179772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37376410-1	2.2828985674926	0	1.3547011919127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79214209-4	39.0976580433116	0	1.28233325403307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25190907-1	1.61720993837226	0	1.56688796602957	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153198693-4	57.0668405070108	0	1.27821223585161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102758398-2	3.83171586924403	0	1.5380734652886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58774107-4	10.8516546415257	0	1.29272344939801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121841661-4	39.1993236785781	0	1.27327560523835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101254094-4	40.8025049327672	0	1.28141486301447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10433556-3	26.1669913438098	0	1.28488184294662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85523904-4	44.2901543141224	0	1.28282455573439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20105389-1	1.69965847256135	0	2.43324830759577	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83694426-1	3.08251351061713	0	1.40083259558635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55753592-1	2.77068960435308	0	1.35418715244071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128690736-1	3.02022041690289	0	1.40027374056302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60528002-4	24.6610828172627	0	1.27620125358026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60086404-1	1.77493934351055	0	2.0897113588536	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16330430-4	18.9328924379178	0	1.27661174261082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36720390-4	15.1352630493728	0	1.28645345714668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56269354-4	32.9786893110646	0	1.27967564754481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105895428-4	27.9434613889795	-0.56816179483929	0.597719430320571	-0.950549314641775	0.341833208727518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71683709491064	1.45575152610536
Merged-chrX-145505243-2	6.00291914344047	0	1.30407179412796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62057671-4	33.601023573863	0	1.28109682533713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151663141-2	5.30630603069769	0	1.38637667016014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37222348-2	8.45539458340903	0	1.34322309868287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88341773-8	107.279985822769	0.834043351596346	0.145640865151672	5.72671242187256	1.02395526628138e-08	1.81204006810754e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.49618314482361	7.32192788346466
Merged-chr14-73410278-4	15.3251444810563	0	1.28496376600932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32760672-4	22.9680731052692	0	1.27751682216121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23908454-4	35.4935300896669	-0.927152789557968	0.268848217089036	-3.44861051933596	0.000563478823080526	0.0120606246881821	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.89092537100941	5.90549237414559
Merged-chr1-180314858-4	14.2972289411878	0	1.28380004322178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94246143-4	22.1949353304397	0	1.28001103267282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70787180-4	25.3497074086199	0	1.27914876785637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38568357-1	1.9202994826782	0	1.74326129527451	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111559823-4	23.8989050459757	0	1.27790314200941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143059647-4	25.4977897966213	0	1.28261886902398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124240687-1	3.69422582792859	-1.02021392857501	1.25727467346629	-0.811448723262902	0.417108028365907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50565192067223	0.845523456341755
Merged-chr7-19303355-2	6.48742833827823	0	1.67891725678738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97466802-1	2.6965076446936	0	1.38310983032114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57301670-2	5.68333187910833	0	1.37653060890258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94433635-4	21.7687129319813	0	1.28066520834726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83616443-4	26.2518371970551	0	1.28160730603339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74430928-1	4.26947712716858	1.30991592606068	0.98779594066566	1.32609972579756	0.184806666962219	0.962798091310945	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3622870238676	2.30603644779433
Merged-chr17-46747470-4	27.1276688591564	0	1.28918933838536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61961015-4	14.6720156481174	0	1.28219216046601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53149898-4	48.8544439239531	0	1.2853748135873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124858785-4	22.2802198075867	0	1.2901111397584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68060868-4	29.9833475888135	0	1.27818252672094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91728080-4	11.8040414222601	0	1.28545000720397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144900058-1	1.90409082366705	0	1.46143855416478	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81982726-4	18.7367046430963	0	1.28373023202451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66360456-3	6.13412643964239	0	1.32001534693183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-95852834-1	2.84433045849385	0	1.40435634913668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31594766-4	31.8823525659717	0	1.27650817484708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105568301-4	22.2910860153653	0	1.28115719270034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29380762-4	12.8917951514562	0	1.2830629385175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-123934164-4	23.7978326003597	0	1.27607056473023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62046489-4	22.7453591957127	0	1.28110629804083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102425632-7	44.4688967914474	0	1.28020172252528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115997104-8	43.915390157757	-0.809333483008456	0.258823006212391	-3.12697659629343	0.00176613986129165	0.0294789719989691	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89811723714638	5.04290520033888
Merged-chr4-63753119-2	4.04717077419696	0	1.57144389734308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63721740-4	18.5269515569455	0	1.28632435523612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109968023-4	20.2859333112106	0	1.27887464171089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12033947-4	24.0850372244142	0	1.27678779155784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129570897-4	21.3576920179489	0	1.29243618570371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46331007-1	1.54497777297579	0	1.60333081304984	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87255875-8	111.781841131908	-0.0251894101894567	0.166688034362847	-0.151117086992725	0.879883353819384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.96282457323596	6.94183804591535
Merged-chr18-55146879-4	13.6940564759518	0	1.28764791538642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128379022-4	16.8424565245798	0	1.27897312159222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167656908-6	85.7651560545021	0	1.27407811731771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36730889-4	11.5348466120404	0	1.28225111701226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34368158-4	32.4966969558414	0	1.28353044853464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110822542-4	19.3657493390159	0	1.28606712122399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58508551-8	52.9858442349844	0.109433441339633	0.224618140273622	0.487197700089246	0.626118235048071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7311516961178	5.83028388129336
Merged-chr10-117720042-4	20.8814743003077	0	1.28165498863956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120776262-4	14.6374362842881	0.630284246106988	0.934153104821858	0.674711931966637	0.499858802258205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	0.773587911294612
Merged-chr8-26981850-4	20.9598045738007	0	1.28128830457749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86774727-4	19.4577323053022	0	1.27693990147297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121371730-4	21.7002000546676	0	1.27938514454516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140983548-4	53.2828207103109	0	1.27834468638375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83895432-2	4.00479901959467	0	1.4299718966446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56109256-2	7.19113897276032	0	1.34992083782261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150851457-4	22.4790819065457	0	1.29009447150411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116668409-4	30.7267285050815	0	1.2775096128624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72782308-4	13.9392047779331	0	1.28736923810421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12468688-4	29.3464493802045	0	1.2774517560875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29841894-4	16.0387783843096	0	1.28312303159801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113590423-4	38.0692305032916	0	1.28161447196221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111936149-4	55.8039264339503	0	1.2754007441436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136569397-4	17.7800016755048	0	1.28113842592663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37013182-4	19.3396403829758	0	1.29192087633428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103721898-1	2.17286929981485	0	1.53579035904719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66140331-4	16.1826777541893	0	1.28374579062934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115398208-4	36.9684163254119	0	1.277010455618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120316197-4	36.5556016959826	0	1.2767268360804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12170442-1	6.37877152392411	0.826972033005911	0.96354789744505	0.858257316734036	0.390750392843013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27953686405334	1.82166021832917
Merged-chr15-50703993-4	41.142840138052	0	1.29806164708689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4536845-3	9.1947567995821	0	1.29105438581598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44660019-4	46.173128277785	0	1.28065528434197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25214045-8	168.2105904901	0.689883008365306	0.188468456409392	3.66046935125706	0.00025175366774608	0.00651528521684568	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.66758413555367	7.34931325113116
Merged-chr11-69410434-4	37.3393857763574	0	1.27594674115702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32181386-4	30.5507883278695	0	1.28804229595884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32575407-4	19.9752646436686	0	1.28152237980059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52822879-4	18.4376630271701	0	1.28792679647582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7648989-4	50.2326412976848	0	1.27660105663184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34905162-4	164.412939985583	0	1.28283748514248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81433065-4	45.7760491390252	0	1.27884167640221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80775385-4	27.2197831233379	0	1.27996902116424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55652517-4	34.4254999921868	0	1.28587516766076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53370139-4	44.6529905686469	0	1.27534145385311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38371894-4	39.5012627250908	0	1.27697261480095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37464099-2	10.7889110782987	0	1.32580335089207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55514910-9	86.8761002462996	0.460869262337638	0.204214865230813	2.25678606607184	0.0240214458297467	0.216123557647065	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45493589563969	6.9278153129104
Merged-chr6-24989396-4	18.4412170601511	0	1.28553709312202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121191430-1	3.18718138834874	0	1.42549934345995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85992201-4	21.2618716813296	0	1.27799167200031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34053659-4	31.8569221422388	0	1.28346825878253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34089678-4	14.2765031237685	0	1.28846063789152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136321911-1	2.25298706507845	0	1.45185438676875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77750719-4	59.0577774506555	0	1.27620043484119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13513964-4	17.646881714293	0	1.28528753888962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84967207-4	60.1806339494389	0	1.27577208605492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39415780-4	24.8897029699329	0	1.27991649687356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31837630-4	11.9584588252803	0	1.28304855768453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95548705-4	20.3197464098553	0	1.27883115444013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63999806-4	25.9550598064307	0	1.27851141423926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153145551-4	12.1763210846981	0	1.28854969924068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79848886-4	27.5417602018846	0	1.28441024897518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55570083-4	18.2603819160241	0	1.28034276304673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79225103-4	14.3276540541217	0	1.29575644364848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71745460-1	2.49880555431555	-1.79123465097064	1.32145430776834	-1.3555025250897	0.175257504633668	0.926417804383728	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1043747452153	0
Merged-chr19-5931000-2	3.84047463456978	0	1.35409169856193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16159751-4	32.6670814785487	0	1.27683123146857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127602750-2	7.72352584589804	0	1.31912849602371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92055547-4	14.8404007898374	0	1.28304743333251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3174419-3	88.8494987520597	0	1.29129344808663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117262863-4	14.6159317877648	0	1.2806848770578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132114722-4	20.6204271448281	0	1.27948264958721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10873079-4	11.8791316903632	0	1.2986008967107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114812165-4	15.204077781699	0	1.28214153984149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149710710-4	31.8414751567571	0	1.27732241307211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53353604-4	68.5537593169058	0	1.27883863577316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-138919716-4	21.2638410998217	0	1.28132948908759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-147799170-2	6.32141036847535	0	1.33920622610508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39360007-1	3.19485250867487	0	1.38080785458934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11713655-4	11.047472947009	0	1.28708005805163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76303875-4	31.6399899884063	0	1.28388380630992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-11716285-4	48.5639039695747	0	1.27771013559202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62066385-1	1.92777501093805	0	1.45795034732911	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66355136-4	18.1647101586532	0	1.3164860155118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111527390-2	3.49793987838487	0	1.40075219250766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20835393-4	45.8147310196198	0	1.27770076186297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138207408-2	12.2295235093606	0	1.29387793249903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164815541-3	11.0832390332235	0	1.31323353332028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193160490-4	25.1490964835867	2.14790210266666	0.749043935341199	2.86752485578601	0.00413696307075454	0.0563900685902224	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	2.30735293279092
Merged-chr17-84101849-4	19.9190524567226	0	1.27950327340209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21127562-4	62.7157817536608	0	1.27690705063122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103606360-4	22.9592633245938	0	1.27794547065162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45280530-4	11.909033479515	0	1.28902294258957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145434284-4	17.6483887329163	0	1.27770166172609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117338847-4	15.1880264545914	0	1.28619439381835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146261186-4	49.6629066954043	0	1.29928519641697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62046508-4	20.848638361309	-1.10699687004865	0.767006249550469	-1.44326968743403	0.148944515308313	0.825314025043415	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35912003456113	1.04220233489076
Merged-chr4-149155894-4	32.1700306319835	0	1.27740043786377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101143834-4	20.9937714960255	0	1.29243770062023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56451848-4	27.8523070461985	0	1.28264899446331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139555992-4	18.8584271830022	0.133388445217418	0.755334108329623	0.176595289086572	0.859826294692449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3991027586223	1.41695929335733
Merged-chr2-45220011-4	15.4343022669958	0	1.28045197101001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112443599-2	4.55203701697523	0	1.52405607288663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35131755-1	4.47473408317249	0	1.45351133162967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95775716-1	2.17638558136793	0	1.38602371282209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91034344-4	14.5549433195528	0	1.28118393528062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172420679-4	40.6250237667774	0	1.29243117393566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3291194-4	12.1074444321453	0	1.2920892463953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79878313-4	18.2411681314142	1.41155393205953	0.471464518375716	2.99397701638843	0.0027536668685346	0.0415568395360883	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41689272614633	3.78231888886052
Merged-chr11-3151495-3	10.3031883897397	0	1.29156784758705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24593740-4	29.4391376166222	0	1.2813037447296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152152231-2	4.69720329617807	0	1.3375333248588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28012378-4	37.4182638782568	0	1.2759209338474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43727810-4	16.2875984133891	0	1.28512287903843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28732794-8	72.0853178656376	1.202422948524	0.263691918253899	4.55995373876507	5.1164890952674e-06	0.000294315225721253	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12396962179049	6.54858745517226
Merged-chr11-68655741-4	36.3076541632065	0	1.27656618554511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127118050-4	17.6592867252736	0	1.2847054812941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132608445-4	12.8506023250395	0	1.28291021069909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126839228-3	21.7880193693882	0	1.27711745886843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-48025-1	3.19333391997837	0	2.43325238723298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-6717349-4	45.9156304846655	0	1.27933441523492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123552009-4	18.8209131562962	0	1.27930319084239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132112470-4	20.3392345585096	0	1.30382870521089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126869172-4	39.7773657453552	0	1.275343438227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86442214-4	21.3515026744322	0	1.2763798169654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80711656-4	21.4870104571026	0	1.28069204172851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88567364-4	46.979462901311	0	1.28440642164948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98672755-2	3.26515101390116	0	1.48778953832847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53195058-4	21.9248129041264	0	1.28067337254126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128724725-8	146.341959016783	0.769577548478078	0.151967111752234	5.06410590820987	4.10321502502096e-07	4.00192073171671e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.76805274104452	7.5460266157942
Merged-chr4-144909020-4	21.0263638645788	0	1.27677697174175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58425971-2	7.47161139013941	0	1.34536818394244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11038560-4	16.4055631294073	0	1.28166263914672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111777478-1	7.99615347659093	1.21617583432409	0.816774027125188	1.48899915268448	0.136487591857329	0.775760474689832	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58301612294988	2.63003640177516
Merged-chr6-56652423-1	5.89031471960207	0	1.30821056413402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51882095-4	13.433978065103	0	1.28646700926313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26483718-4	42.5713146384132	0	1.28313604069024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47014765-4	33.8903050096628	0	1.27592214231306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61244900-4	26.088396787329	0	1.27873204779894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93757078-4	22.331087528392	0	1.28137633820932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103343673-4	44.6541541126254	0	1.27971193735061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149840489-2	3.80241975561953	0	1.35415353164825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113009634-4	18.6147358134395	0	1.31361206320133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8637138-4	39.5581622465464	0	1.28073491263677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30913269-2	4.6154788512853	0	1.45155236680308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65153736-1	3.35946254263887	0	1.37411888275621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83009703-4	45.3013426941086	0	1.27841795074728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59565994-4	16.937282870717	0	1.28418797976404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148522230-4	53.1811237864264	0	1.27931306082835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-64875978-1	1.96586773418483	0	1.4544321937874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99182386-4	96.125439367743	0	1.27787326489074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-81587-1	3.95193656745574	0	2.43325227228635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75024991-4	20.0846694524891	0	1.29561431764078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100567365-1	3.09693526764821	0	1.36363740489867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-10682972-4	15.604461821513	0	1.28968744082568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23307656-4	17.0032125870129	0	1.28645969722987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110313607-4	39.3648899113079	0	1.28005779782828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9914573-4	33.4167183595589	3.75030556330231	1.0019764993607	3.7429077086091	0.000181903052991989	0.00506892831591237	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.87496859647037
Merged-chr5-29839655-4	12.9746186129475	0	1.28397029436641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54918076-4	22.9322568278457	0	1.27998476647385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53925599-4	27.8088500389457	0	1.27444274013917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24487859-1	7.38990925980902	0	1.35578475101581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123910582-2	3.39424028877614	0	1.56828785721662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34186170-2	3.56188753447711	0	2.07312863369541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3477569-2	3.05705201357	0	1.37366295184293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13987529-4	10.9426422479715	0	1.29374429698374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70999692-4	63.9010971970827	0	1.2758534643635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88138424-4	29.9672217466519	0	1.27652602422549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67598722-4	81.3786555848545	0	1.27665279574512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102944270-4	59.4656928748571	0	1.28027237152363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25302832-3	10.2888752021544	0	1.29208781529543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11341356-4	22.5184332515785	0	1.27529654159841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-86885694-1	5.87865968580644	1.27014649898717	0.939224342861924	1.35233558269677	0.176267986356913	0.930254226819484	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918503018311315	2.24287124256397
Merged-chr1-63119905-4	15.580589068273	0	1.27793216257591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165642477-4	30.2785670672959	0	1.28415335241025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36648712-2	3.20033307438755	0	1.45481943614384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39303494-2	19.4133295914125	-3.58910384407519	0.436604832625322	-8.22048583954914	2.02680418674586e-16	4.56701884093431e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56018319183366	3.11038056962808
Merged-chr2-160208469-4	13.2004783283027	0	1.29604776213423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6256972-4	9.36964784191446	0	1.29918804875697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36187301-4	40.549190933222	0	1.27652780572359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155065460-4	25.6770795855599	0	1.27941482087042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46818313-4	17.5326525780077	0	1.28103377749019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50854596-4	15.5135505605801	4.65685199150325	0.957307028592377	4.86453337582894	1.14727147475223e-06	8.94625319679705e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.98923977879559
Merged-chr6-124505220-4	18.9679734229128	0	1.27695953758468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52133416-2	5.20015152542154	0	1.42288976125166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62165063-2	3.37870965518569	0	1.37883890579159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-168779296-4	12.2350842572599	0	1.28995673194517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46558883-8	118.780568018579	0.128874923984538	0.145925617679665	0.88315489791137	0.37715258632168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.04145731576188	7.15877445614635
Merged-chr2-68434075-1	2.68088149263424	0	1.39100108854181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64943967-4	13.4991692697932	0	1.29179907884216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73569207-4	12.7415700852019	0	1.29405095136017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67836446-4	12.7464076628021	0	1.29499145508572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104122007-2	3.99768981191581	0	1.39977486284559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52842771-4	22.2948688185159	0	1.27779132571908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120369134-4	12.1365547869343	0	1.28533273361214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26512627-4	15.1092919240668	0	1.28455026722249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133353605-4	13.6605703316728	1.95112134582864	1.24311525938859	1.56954178712944	0.116521750585461	0.694889443460746	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr17-50171138-2	5.76492291221633	0	1.37277654559613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172423555-8	115.48662999124	-1.21788059205913	0.168232254352868	-7.23928117556231	4.51069015787129e-13	3.59457998849095e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.27556832392612	6.00602804481013
Merged-chr5-135463581-4	12.1956551335437	0	1.28465135344256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80043631-4	45.8531059860677	0	1.29154612195536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62219018-1	3.15566436769236	0	1.37033380609468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97211398-4	45.2918333247739	0	1.27485964205954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52615278-4	45.4305235077018	0	1.27605064080817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11596848-4	34.3409700536967	0	1.28059417290484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154097846-4	19.8853607425815	0	1.28484576222109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31197978-1	2.40086673880613	0	1.3515061737324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148886031-4	15.4623381870723	0	1.28291965011074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48706465-2	3.42927029629131	0	1.40147999757422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57391626-4	41.2457362806661	0	1.31202218893762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70061828-2	11.8552007627644	0	1.29495337169738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69458533-4	12.1489181457885	0.95647602179618	0.698224985314632	1.36986793929349	0.170728129362962	0.909316190508773	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44065282707927	2.01888840934885
Merged-chr4-8842989-4	58.1829010398896	0	1.27703529020824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21265790-1	4.92528811147459	0.584030605111512	0.668936862782993	0.873072837818739	0.382623377860279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7801972296513	3.30983433996409
Merged-chr10-78364270-4	32.8963020377327	0	1.27512787736174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53385766-4	36.6940773361529	0	1.28361750155047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33530764-1	2.2996889530217	0	1.40092252471188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117216281-4	25.8095090356514	0	1.27926280243301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84807854-4	44.084049721444	0	1.28374766065779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127270617-7	51.9536486588737	0	1.28033861432965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103175221-4	13.5697495608793	0	1.29871385912927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109682325-4	18.6784676362534	0	1.27736854771802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92065467-4	26.3549070709067	0	1.28721770455824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110980158-1	3.98463247943226	0	1.32891746500159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16053344-4	14.9060772988784	-2.2948327419013	1.06486072508702	-2.15505435390508	0.0311575810934784	0.264041407616968	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47738935185674	0
Merged-chr18-82862322-4	14.285253094487	0	1.28073822006704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42847325-1	1.60320820639685	0	1.81022263042975	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13592767-4	29.0280498058838	0	1.27898411330236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112693659-4	45.0125907317917	0	1.27695750771015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113038099-4	24.1898588983206	0	1.27840733416575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80025241-4	42.1329615414449	0	1.28182857490556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23246786-4	34.8670980323718	0	1.27282463320302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20532628-5	42.0402381307811	0	1.2907762378155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68140576-4	21.0875899930794	-2.09847634105608	0.600096407168391	-3.49689869159179	0.000470700549730487	0.0105120977862913	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34745014856793	2.96913654244652
Merged-chr11-19929316-4	14.9948060913054	0	1.28785984938453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36216654-4	19.4505955762194	0	1.2780201825548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-42871867-2	3.58795452308284	0	1.38591858943508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-5119908-4	25.9948278359819	0	1.28828923302861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43920013-4	22.5377465497185	0	1.27773739148336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148486377-4	50.2462028768009	0	1.27474130077714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32407481-4	53.622892888163	0	1.28145497449254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140947158-4	34.9701003475855	0	1.27957190361186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111390065-4	27.8978456875783	0	1.27653198640512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101864142-4	13.6811673208553	0	1.29466788305796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14135201-4	13.2787896613598	0	1.29238451508342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152025432-4	18.6787842043973	0	1.29389484125011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47948414-4	15.8775268755188	0	1.28418894814804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-104488262-2	5.33172842839994	0	1.335664878272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62216910-3	40.9282604251272	0	1.28313494396907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107831346-8	105.614190151865	-0.371449850539992	0.181696259866966	-2.04434505592993	0.0409194711079817	0.321462341791557	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.77535505778074	6.39995789586567
Merged-chr10-96274168-4	12.8713099185422	0	1.27934302272273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95632905-4	13.1863093881552	0	1.28539590643079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-42194107-1	7.67217489004155	1.84149197559673	0.640216071580171	2.87636011862618	0.0040229045642971	0.0552154424823689	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75054936097063	3.65364879963587
Merged-chr10-51416880-2	5.87779056110923	0	1.35861669702901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108631270-4	34.1156980251358	0	1.28168841956481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55525311-4	26.8773694729889	2.46629374091106	0.721295240764717	3.41925691662168	0.000627924085732491	0.013134547793302	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760552225909557	2.36453465698696
Merged-chr6-97492709-1	6.09276138652563	2.03075817526774	0.757300729486968	2.68157430225041	0.00732766396951959	0.0869706440406103	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91189265756177	4.16531447390776
Merged-chr18-80465894-1	2.42474971900678	0	1.38256352717164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49371665-4	16.8926881120196	0	1.28085910003942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103477394-2	4.60811675208646	0	1.5881889531549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81536312-4	20.2920038841212	0	1.27682182794648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55547345-4	12.7109193501153	0	1.28762403561166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167892105-4	12.3963662367147	0	1.2838758459543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46450577-4	29.8138546797812	0	1.28747634340003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109750506-2	5.0153634885659	0	1.34597436470923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43253231-2	12.8580406822094	0	1.31190109731439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85593158-4	22.2178084641384	0	1.28034845248242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55256437-4	16.6491374040012	0	1.29289977288359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3359538-4	24.6748395573437	0	1.29989011499506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-3605-2	317.205166945606	0	1.33673243948208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129035273-4	19.10226898051	0	1.28315780022578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176075636-1	3.09896414859954	0	1.36754521866784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52198613-4	15.6972186008012	0	1.28151131884615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-2429-4	472.702823785967	0	1.33850201192048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113752447-4	12.2432466432765	0	1.28600089548446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78876229-1	1.91831202280844	0	1.6263969468589	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117891284-4	16.6855988161208	0	1.28859503652701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121987484-4	18.9199518804603	0	1.28300022496842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93969502-1	5.81397099927172	0	1.3204913985206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36633287-4	11.165894947621	0	1.29048682142815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140731233-4	15.6559086650732	0	1.2909921482601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73397117-4	16.9376914641922	0	1.28380953802507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52565252-4	17.831772183133	0	1.27729367524268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34485937-4	20.2649580917022	0	1.27939950286255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102394608-4	21.7398763880516	0	1.29624499590744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15761405-4	24.3900024382605	0	1.27571329535437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99414471-4	22.3270345699044	0	1.27877827153056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126684167-4	26.8372522557552	0	1.28009073221729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88710023-4	19.7292795855583	0	1.2899447494048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36563335-4	28.3981876196384	0.431742776176089	1.15614751616474	0.373432256818144	0.708826755552157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	0.469435083901436
Merged-chr16-44778946-4	20.8846185677904	0	1.27714919669262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90237585-1	12.8287309201786	0	1.30896885244399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90459204-4	21.3184308041178	0	1.28696606878508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52060507-4	81.6917856026667	0	1.28064140296106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86047563-4	31.1503684938007	0	1.29463315335116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4080074-4	20.6957708577209	0	1.27898316344235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177490011-4	23.7401740731193	0	1.28256269200171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17629262-4	24.5324407361502	0	1.27929983764138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62055456-1	3.34219723994898	0	1.36595391023689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98775001-4	24.2055539233797	0	1.27645273020675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98894624-4	28.7896882266763	0	1.27632411668789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20943554-2	3.08248638075435	0	1.3473347092736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24638804-1	2.04554228483151	0	1.44742019494271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46371231-4	45.0167781539766	0	1.28338811788388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44466032-1	2.35320972440787	0	1.52555168370992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20787087-9	121.184015318473	0.190903445045867	0.201003182823934	0.949753344020856	0.342237597671413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61618268118391	6.81513420947662
Merged-chr11-103223602-4	17.1730018515822	0	1.28476058506437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111579727-4	25.1111697476916	0	1.27991066220454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85594620-2	4.32645274222706	0	1.40621351230725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9082361-4	29.3821876278011	0	1.27519416871269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116482917-4	11.8391914538399	0	1.28497120939544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105655685-1	2.04477803321571	4.28089968721163	1.34318586004806	3.1871238482651	0.00143695230758399	0.0250865844219566	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.23301905435935
Merged-chr3-61344265-4	22.9568591282566	0	1.2949172263263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8837661-4	27.775111000107	0	1.27915844880473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132695794-4	13.8083688205435	0	1.28057553861918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80614894-4	21.7662806383117	0	1.28192236095684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111178357-4	12.4918332546414	0	1.2929229623968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30468985-4	65.1720784385956	0	1.27591396080057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149975566-1	2.89589318177521	0	1.50064299591642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112232828-4	44.7875577972434	0	1.27624469793668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91928056-4	12.731197620479	0	1.28005541143928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80054207-6	32.3885705526083	-1.54325245530581	0.381802854784951	-4.04201392411022	5.29940849422158e-05	0.00190691160497469	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97896011151949	2.74749383896444
Merged-chr6-140561234-2	5.02020159685163	0	1.33745291918007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107758507-4	20.9803449115616	0	1.27948473802434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39241173-4	22.1730684272263	0	1.28242439575291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91617403-4	18.3271657233578	0	1.27914382685298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100032749-4	24.2341376602781	0	1.27531988204179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-44254-1	8.61226217030367	0	1.31596907412723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80054475-4	26.7017740088624	0	1.28267759225338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49190829-1	2.70904246963186	0	1.40331261261688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143043141-8	55.2960546985555	0.637989449361615	0.223332264617747	2.85668284631238	0.00428093355055829	0.0577382629091398	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58142584267849	6.20975319881589
Merged-chr2-38282334-2	9.73769935174258	0	1.34992288207312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65934992-4	12.4165585157246	0	1.29390196272424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101826497-2	4.08172529507277	0	1.82508765155601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144290514-4	33.5080430542303	0	1.27486463042727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101293213-4	32.7256520286516	0	1.2767018835581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85385913-4	45.3295135134767	0	1.27955189796064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25854211-4	23.5507986022874	0	1.27733647027465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31390143-4	20.3293275160861	0	1.27941400714718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16038733-3	8.36723981942636	0	1.29737489711015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60341783-4	12.7039241274132	0	1.29112618164076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60999283-4	24.6967894833169	0	1.28004777374844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89248280-4	19.7157816027341	0	1.28230942885501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98815340-4	18.843953678203	0	1.27883294309142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69423011-4	20.0977737973555	0	1.28003965886834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30641953-4	22.5321206660948	0	1.3013576738139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132601504-4	22.6748077052218	0	1.28036369703596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66852116-4	28.9128275647067	0	1.27447789622164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161406569-4	61.8947544635103	-3.24068074886824	0.542524372234804	-5.97333671023663	2.32449440927591e-09	5.06321372228479e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.98168459794719	3.38948412729021
Merged-chr3-96226927-4	31.0587205672043	0	1.27560784775723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126019166-4	31.6068870822602	0	1.27992395532689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140765026-4	24.8464491122697	0	1.27605124286832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105623098-5	43.5251725514949	0	1.27520538760534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45750137-1	2.31184392027556	0	1.45629215939321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57742930-2	4.2257408112854	0	1.32731419697752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55798221-4	19.8175131064364	0	1.27988681411797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20887023-1	3.91404255958936	0	1.32098338501656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25120576-5	65.0036871235186	0	1.27312043407285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110645491-2	3.50839511562895	0	1.35413115738902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170939453-4	19.5835869147656	0	1.27665626165616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88607577-4	20.6612704412571	0	1.28528623904729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95797378-4	22.5908281901537	0	1.2801478942886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8376830-4	15.7665477435472	0	1.28793533670602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98785891-4	26.7972078638125	0	1.28200717140581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46265606-4	40.9490248127525	0	1.27769280078607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33160666-2	6.70993683963124	-0.465091594657093	0.66262705882342	-0.701890435146014	0.482747494325115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70804570303062	1.97815176992225
Merged-chr12-114378936-2	7.85751947526652	0	1.29376183144409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61135380-4	9.88402682201142	0	1.29053344968637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116655310-4	18.6190608179437	0	1.27955139454968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31009511-4	16.7770265702655	0	1.28681679078304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26577004-4	13.6654083260603	0	1.28289780485525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21220692-4	22.8200243983915	0	1.27928689225354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9759291-4	20.6660970654205	0	1.28589601568401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12005727-4	14.7950269294599	0	1.28410636176376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62756015-4	15.9751949368978	0	1.28717974050912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69201116-4	31.7712300097221	0	1.27560084467659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124251011-8	44.9887194741517	-0.0838346028076079	0.316037664260885	-0.265267758523881	0.790803200021914	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08627325409275	5.28437721836205
Merged-chr1-39754804-1	1.47506898210711	0	1.47188367499257	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115015652-4	20.6962214714464	0	1.27969231137032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179829101-2	4.12407573706924	0	1.37386718045365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138192201-4	27.2664919141762	0	1.28112078778748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84408916-4	11.4699217893229	0	1.29380653462678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-9824-1	5.43905599341516	0	1.34870782569335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-55469-1	6.73668900073575	0	1.34327864321955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136151762-4	19.3323120981234	0	1.29280592497114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140733486-4	29.4763712485493	0	1.27718451436009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9191371-4	31.7767652018311	0	1.2823534475173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108765932-4	17.6241836304063	0	1.27930571131778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61120743-4	25.5356350477559	4.2259139446204	0.974540980738736	4.33631220045462	1.44893109242674e-05	0.000682145901770303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.31776252764976
Merged-chr17-34965795-2	4.53577672280573	0	1.3695583666747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174204916-1	3.72747475298442	0.790470572826494	1.37693688780814	0.57407901540411	0.565914332875646	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.733321818366247
Merged-chr2-157500572-4	26.5728515158489	0	1.27984752482405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160268041-4	25.8919932691249	0	1.28056167744956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6555730-4	27.9576073400097	0	1.28156706458782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45646066-1	7.7559332008873	-2.4397830527375	1.11549702843945	-2.18717127032664	0.0287300233537108	0.247807828150949	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49756453897479	0
Merged-chr14-61448113-1	1.93759056546163	0	1.49260261292308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136921138-4	27.7491664106488	0	1.2849401472899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117412839-4	25.89422490512	0	1.276748406023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150203176-2	4.16270492164038	0	1.40350670450485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136936585-3	18.310423598149	0	1.27966605455177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160210735-4	28.6335514155991	0	1.2744511211418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180124875-1	4.93491221656627	2.27626378512685	0.816897973512256	2.78647255708084	0.0053285129681619	0.0683946196066603	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34563605053486	3.62238446349995
Merged-chr12-25209024-4	13.3326285762683	0	1.3035333702647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23874604-8	65.6669563768059	0.520534497341295	0.187638439409547	2.77413572069396	0.0055348582038814	0.0704618827568349	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.116080243263	6.62568395558765
Merged-chr9-55255862-4	19.8480123112319	0	1.27857114330872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34386544-4	31.9694251143454	0	1.28226932381622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88407030-4	24.171206555166	0	1.2797803174045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125328225-1	2.49698702148731	0.246526236391837	1.36940624011883	0.180024180677345	0.857133584885231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0.581381506691384
Merged-chr16-36997835-4	19.9412162360996	0	1.2845929118967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49252288-4	15.6017649795223	0	1.27709727550221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153791585-4	15.2292458285706	0	1.281439378733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55008386-4	38.8862943006087	0	1.27568929537917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99270551-4	41.8380801849933	0	1.27381923809278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88202172-4	18.1878045536209	0	1.28293004230987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57874338-4	21.4289215372519	0	1.28080753931889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38185564-4	15.6970500525695	0	1.28315828483066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64703053-4	40.1404807080843	0	1.28088621971217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21408572-8	95.8034977371336	0.401487173488861	0.178123167691866	2.25398626518585	0.0241970320464616	0.217165122388145	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.95177193070459	7.35200449499326
Merged-chr12-88446032-1	4.72064457450502	0	1.32613028833153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108478295-1	5.37447993478482	0	1.36471830248836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30590265-1	1.35557808173264	0	1.55853342125805	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84317918-4	24.2562835567403	0	1.27984686206105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85250512-4	16.9056969715041	0	1.2868292914912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5726181-4	14.2180806415693	0	1.28523513436588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79036494-4	22.4085664428303	0	1.2777959028175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127815008-4	29.5111645655444	0	1.27692070156635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5875655-4	20.3264748922068	0	1.28088430263066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47221450-7	47.151040702448	0	1.27569327196512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91046418-4	28.8415260616454	0	1.27965786807812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60991708-4	27.8113733462802	0	1.27790374635209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35050702-3	12.3033996124797	0.152150558726404	0.618535267497883	0.245985260213032	0.805693642646895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22115346945685	1.61981563456346
Merged-chr4-47333737-4	15.1096600416146	0	1.28384228638292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142608834-1	2.01564426428998	0	1.41889043979723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59735871-4	15.2662367123775	0	1.2811498238396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126438490-4	23.0414811713466	0	1.2801629141548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61146299-4	15.034940980021	0	1.2959635681031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29385144-4	32.4672347038232	0	1.28314153360115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134518786-4	17.797583563028	0	1.28413293441957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51895670-2	2.39896826544916	0	1.56963358449942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76531012-4	25.5884740119873	0	1.28699375601141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58692059-4	28.588668123994	0	1.278069267354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41377827-4	19.421122800825	0	1.28307647606718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101853991-2	5.02708210590503	0	1.49266553788601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5951070-4	21.7654739906983	0	1.28121519181926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21225176-4	36.5702230121776	2.44846745309725	1.15134937093251	2.12660684490076	0.0334527632975335	0.278188377505806	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-68981488-1	2.08059097002185	0	1.40434898248007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141781388-1	3.86891509268623	-1.80439764723647	0.912413498121519	-1.97760954978348	0.0479727711062273	0.360118173544805	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81839143353408	1.64538595732494
Merged-chr8-108694017-4	22.4057197599415	0	1.28122329630883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61592506-4	28.8621447479445	0	1.27512373727131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41235823-1	2.23984498693377	-1.99288832078861	1.28653226893986	-1.54903873684475	0.121372408397166	0.715765079211712	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12751608310997	0
Merged-chr3-135720120-4	15.9631356928553	0	1.28226814172573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17880019-4	58.8763895930375	0	1.28005327725632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74278131-4	19.5883694836702	0	1.27739435054011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28053633-1	4.1574388584367	3.2731054076281	1.1509815604336	2.84375138589975	0.00445858223025299	0.0595687005557374	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.15554725514874
Merged-chr3-149086270-4	24.8977907490494	0	1.2767298877189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55918517-8	142.016608280809	0.420681558638286	0.148898691330351	2.8252871457745	0.00472382619152621	0.0622973050073606	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.18120769887054	7.60398231307027
Merged-chr10-59589571-4	11.8939818414697	0	1.28002118346055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91679223-4	19.6656653491899	0	1.28095979180599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65603907-2	2.64738285721038	0	1.42662598258406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25138376-9	133.626729057811	0.97029131580033	0.17862677208183	5.43194787932368	5.57422055481359e-08	7.60444710594674e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47098647793495	7.40333819781255
Merged-chr10-66814580-4	26.722585636036	0	1.27744924465058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120128757-4	15.4803880536348	0	1.28463293104597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78400749-2	8.62377960500249	0	1.31345369612839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9159504-4	31.0978750637455	0	1.28039954367306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-93572229-1	1.72959291112626	0	1.62347404201486	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72165862-4	15.8048745094663	0	1.28311982021348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95827635-4	45.4344050669938	0	1.27730722139089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18687086-4	24.6786571250319	0	1.28730635313343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65956124-4	29.2472928859321	0	1.28518951525868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52602273-4	19.8009522753625	0	1.29632147161506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55330796-2	3.79005573142844	0	1.99959202440197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151250949-4	35.0501941708472	0	1.27552993208505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24007131-8	94.8507063127719	0.204242623165199	0.184187734114427	1.10888286968292	0.267480714662967	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.92334229067864	7.14556765915387
Merged-chr10-95152778-4	14.5418857770646	0	1.29635068407808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61416142-4	44.4042307785479	0	1.27919566983461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59980987-4	29.9111928324183	0	1.28232062335908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84023286-4	25.6697200495097	0	1.27817989891615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35482001-1	2.61517058767183	0	1.51787299637558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76610910-4	38.8450118813912	0	1.27307298149876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90044241-4	37.7453187087471	0	1.27885647712917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171786277-1	8.09696824306276	0.620569837973169	0.543302990627213	1.14221686366341	0.253363888003981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40490166154954	3.33387018775109
Merged-chr5-92525045-4	25.357675021733	0	1.28420233503545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69993189-4	16.3000055645457	0	1.29400666029074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20077332-4	18.8994650440956	0	1.2783284582098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5180923-2	3.5231579034026	0	1.41539971027264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34389524-7	77.1122508675942	0	1.2762914872556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154904648-4	19.1728666618529	0	1.2861251391326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110697183-4	22.3458906717272	-0.509625087040249	0.640245514923326	-0.795983845511639	0.42604142502596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31521666226174	1.75485430327507
Merged-chr12-32128056-2	3.24177667617463	0	1.38807869292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5692797-4	12.9237490148873	0	1.28772344727934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66490825-4	23.3364708941944	0	1.27886481749718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60870999-4	13.0580289473495	0	1.29561960829079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19046215-2	6.75417714965719	0	1.6899813579953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107012395-4	17.3345933225611	0	1.28827662575319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57576397-4	55.5318177715336	0	1.27698086075566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34249746-4	30.6359565319827	0	1.27783034702185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119499602-2	3.54816085230766	0	1.3928830988976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31189543-4	16.5607940309696	0	1.28025566862266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150823211-4	18.9225191702621	0	1.28076318262993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36726574-8	97.5647448625248	0.0412065340731274	0.157634265236707	0.261405945028836	0.793779472915295	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.76150740183943	6.79713350033117
Merged-chr17-44459177-4	31.8323169775197	0	1.2846531815385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28374574-4	57.165007615811	0	1.28267436527463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132341931-4	32.0805511530046	0	1.27767154152839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88526389-4	13.1248681294473	0	1.29019455937304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11535605-4	44.4814875045947	0	1.27881190741419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51915716-4	35.0972231896634	0	1.27628350815021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10694084-4	31.1357457556397	0	1.27911334505647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119713593-1	3.3821903987803	0	1.38437918276459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64078531-4	18.6510083791105	0	1.28952098493119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144240161-1	3.88398432179052	0	1.39865388032052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179645885-4	13.0031634070821	0	1.28945160952583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9474597-4	19.5356058132065	0	1.28180051620455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117343177-4	21.2654955104598	0	1.27782851594571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35735488-4	52.3744366034703	-0.390885731098238	0.251039318550928	-1.55706975845275	0.119453924115624	0.708176660757586	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.91727632589447	6.49592170736452
Merged-chr11-34010971-4	61.136661844841	0	1.28413806555119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19927205-4	16.055869402924	0	1.28287660489704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99377673-4	25.7860303915387	0	1.27757618977176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-26559-1	6.88119208283375	0	2.43325166659531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61585628-4	30.5567496402518	0	1.27910117903132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26442014-4	46.0786577203088	-5.69904138174778	0.709016882483827	-8.03794877462284	9.13548033699273e-16	1.70562028028893e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.51343417569253	1.36759862365701
Merged-chr4-154944371-10	122.098484670331	0.277110417796216	0.224264405548406	1.2356415505108	0.216591832702249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60452946917764	6.84987569147439
Merged-chr2-21029843-4	22.0339054165011	0	1.27695499828974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-59185805-1	4.82091754567225	0	1.31597541022728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104425246-4	33.1700757273661	0	1.27807939315464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4113325-4	25.251272992123	0	1.27911585041175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36447152-3	19.2556857023609	0	1.27982449411497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55380188-4	29.1591240102443	0	1.28033102849532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5605625-4	14.8127726807696	0	1.28918866580537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31871027-4	14.1565134966803	0	1.28480668548523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10840743-1	1.92495052790025	0	1.40532138127815	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-46109004-4	42.9172658590654	0	1.27562074573635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167331352-4	27.2288410722242	0	1.27734883936103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33358700-4	21.1604284567194	0	1.27848662902833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16233740-4	17.3581588085914	0	1.28169043937091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79352320-4	14.7080589152141	0	1.28540627649642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100431910-4	17.8374870215281	0	1.28157312190421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46795821-4	18.0264535152051	0	1.28677040531177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97584339-3	15.8930181661967	0	1.28356301573801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44631768-4	24.3781884194479	0	1.28219006762504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39957831-4	27.6712357014695	0	1.27956088319851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38171553-4	21.9040158828353	0	1.2932222409497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27182359-4	30.925486306259	0	1.2868203588178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98702626-1	2.26173173092853	0	1.48125269890405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28926665-2	9.99938024845451	0	1.54260810342953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79173522-7	240.602210654008	0.561979521272952	0.196016766550164	2.86699720214562	0.00414386675978859	0.0564606166149176	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.48065935407284	8.03318125585068
Merged-chr5-99983922-4	23.3744798717477	0	1.27839396458996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37642604-4	32.1867183602738	0	1.27689729836056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26453123-2	7.64687230234135	0	1.34533857605514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114908275-4	21.6888133732561	0	1.28602627939885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70057533-3	31.8962571474717	0	1.28503508701963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23913259-4	27.1718436326528	-6.45807518251254	0.995595380455807	-6.48664639198695	8.77679991010293e-11	3.11700416807384e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02849643272947	0.306240821987646
Merged-chr8-13625659-2	7.75093608967017	0	1.38410449567755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92752006-4	17.121031270274	0	1.28604093298109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47377180-8	74.970742830224	-0.491654362487837	0.24792252044239	-1.98309682238844	0.0473566154871631	0.356598916296861	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68688913914721	6.15571061807567
Merged-chr2-13500555-2	2.07248051839725	0	2.06578250191133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3029761-2	11.4443856859702	0	1.41852742008707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36262283-4	35.1350498051324	0	1.27993976122435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69919193-4	18.6717119588463	0.131066240363639	0.616805850660673	0.212491889017024	0.831723304935311	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37040836477586	2.38835823208704
Merged-chr5-52431672-4	23.8508990146786	0	1.27499060887152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95708844-4	48.6130615717747	0	1.283165511759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61728211-4	18.1509826895433	0	1.28521370882715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130893216-4	30.7070016463971	0	1.28124312456027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50415480-3	16.5554519464146	0	1.27992397560591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84089811-4	11.9076604558806	0	1.28678122314141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44363632-4	27.9842460663014	0	1.28295200612478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30441969-4	25.120602918088	0	1.27897198139611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39231643-1	1.70681651127922	0	1.55460827511666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83650842-4	14.444137797645	0	1.28476720483992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30509488-2	5.30754693519054	0	1.38668437844953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75164054-4	17.3468392907849	0	1.28049698271184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40953832-4	18.1044742923023	0	1.28627770035845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54742606-1	5.58892731876182	0	1.37609296531552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110944885-4	35.5409754245946	0	1.27653384519367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11017987-4	17.2955670096805	0	1.30863221315866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31126549-4	79.1777427235317	0	1.27833209318885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55361141-4	24.3162699162472	0	1.27824860806399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92637042-4	23.500800271868	0	1.27806164222755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138190923-1	3.87517438311973	0	1.32029312828012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32686047-4	17.4759091050417	0	1.28064870551443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35342811-1	2.95358001556916	0	1.38517926253643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165661902-4	73.1199455212412	0	1.27920568323368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40372494-4	23.8163323863125	0	1.28142484822695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91082115-9	147.401569300583	-0.453313262526295	0.219317510916434	-2.06692689804883	0.0387410427427081	0.308728314520122	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.92925536654045	7.46906280214805
Merged-chr11-3183969-3	13.0248417586696	0	1.3035386325901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122754094-4	24.9673612724892	0	1.27618047919464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184471557-4	15.2124277126013	0	1.28762361943858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32396414-4	19.8546578573356	0	1.27722103559626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68157354-2	9.33462905845147	0	1.39351272866036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131083789-3	9.75028118466886	0	1.31643305382435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113592018-4	39.6265160247615	0	1.27696288226398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123058889-4	18.2517891146346	0	1.28443223553833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130648287-4	23.4767704256503	0	1.29681613916634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29550319-1	1.3312486990447	0	1.64339020335934	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191817973-4	16.1499634361542	0	1.28993140453705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64342325-8	71.9708498410764	0.210384167625258	0.189842179921722	1.10820560379156	0.267773031255098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18069230180406	6.40268716906997
Merged-chr11-83560604-4	10.3189368152885	0	1.28659380346545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36632313-3	39.2726480928331	0	1.2782805881548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97232535-4	30.272489448624	0	1.28453544450738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29264567-4	35.4718690781064	0	1.27667562405751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152806218-4	50.8274368868364	0	1.27659436861721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116942545-4	25.0008329719398	0	1.28593003173807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172400104-4	38.0579406826863	0	1.28335809319502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140817027-4	22.9531305767998	0	1.28051202882021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49764218-4	17.022132427033	0	1.28458313799933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65991367-4	42.0966674449091	0	1.28966394960008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68844647-2	3.79605305169992	0	1.3925633139227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86191664-4	42.6509765900471	0	1.28136107097282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77910137-4	18.9958156857413	0	1.29363726645929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29786779-1	8.99942086701537	0	1.29558158233126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143021947-4	24.2521700523744	0	1.27957990015813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73056283-4	12.6839840322749	0	1.28905427774946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35496118-4	16.7655526130595	0	1.27920007471328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90445603-4	9.81142696556025	0	1.28651576142661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26812075-1	2.78014069890317	0	1.40192842731554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53783467-4	21.0213961332724	0	1.28310423411837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124705100-4	28.4736839087393	0	1.28512343882436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74494594-4	11.8283338079793	0	1.29111918766289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63177439-4	12.3877850537414	0	1.27959739756006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73233594-4	28.865077425772	0	1.2779105359582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33642000-4	16.1473842488158	0	1.28544067881188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9806655-2	7.40416440938306	0	1.31590324147722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133830583-8	58.9176583311709	0.135038488695721	0.217714171873752	0.620255849830608	0.535089356977714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11904267664433	6.29435811645346
Merged-chr5-31936093-4	38.0606284849253	-3.52950175801379	0.550972074942349	-6.40595398302737	1.49432033265646e-10	4.93170992210955e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.41802374647567	2.48475512893435
Merged-chr5-100637020-4	15.6410627265816	0	1.29554116226363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69222528-4	30.6237696820607	0	1.2777976166107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38731110-4	13.2050710999965	0	1.29478837528696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127594718-4	45.8520451293687	0	1.27993258019035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4475232-4	32.7875622346251	0	1.2818992438786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70601552-2	9.58324789245312	0	1.31397413971475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86888728-5	32.2782916456679	0	1.27765106164531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84524196-4	28.3204198512286	0	1.27402241383647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92216871-4	34.5023447219294	0	1.28488600050547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12208316-1	1.8778169337515	0	1.4412239372222	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70287512-4	15.1803447784219	0	1.28473495114092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58742647-4	38.2487276947798	0	1.2816742525802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139384795-4	33.0208022882122	0	1.27780744126865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21522661-4	23.270486737905	0	1.2807921624143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46406136-8	93.2560512390769	-0.959329412333044	0.176514289957131	-5.43485409915556	5.48412872479653e-08	7.52869486660828e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.86906598726286	5.89512665262609
Merged-chr16-55555368-4	25.5688008955109	0	1.29486252636472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37559849-4	15.8974299314046	0	1.29854036344159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167588965-4	39.22115585803	0	1.27915209269386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-49894961-2	11.7560886013144	-1.97236971035041	1.11743661151127	-1.76508420256867	0.077549615251225	0.51365413109684	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961036207701452	0
Merged-chr10-99425461-4	27.6878441492434	0	1.27838372569751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136137246-4	44.5295086369472	0	1.27990758920993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34823563-4	16.2584671932485	0	1.28403745778845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24791547-4	54.2916022782239	0	1.27901003812049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117358052-4	29.6508757296848	0	1.309997984319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80083339-4	10.1980698543895	0	1.29062948995922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60927479-4	18.8483246056039	0	1.28409613305557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3359309-4	15.3743469764745	0	1.282197612275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115500574-4	36.2847137611545	0	1.28164910977463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57873264-1	4.0320946067081	-0.840834449763525	0.911681141768505	-0.922290054319266	0.356377300397117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59670096422343	2.48211543439749
Merged-chr6-140750610-4	21.5341933567714	0	1.29284520903906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17024600-2	6.59283055694663	0	1.38696477585571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61108665-4	57.43014944807	0	1.28103186106581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72351512-4	13.8588459382705	0	1.27955574792651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118083214-8	214.998196102862	0.376498357151106	0.1680971742073	2.23976612888688	0.0251061098863446	0.223573706273246	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.25060905593961	8.62706759687896
Merged-chr1-37639308-4	8.9032668245675	0	1.28728540967407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9492311-5	42.5540852827841	0	1.27534776708593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167944939-1	2.00677135654856	0	1.55309711333167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31002831-4	25.459937826109	0	1.27699076092543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101751947-1	2.26121213144502	0	1.38956574945992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52703416-2	4.93548332015216	0	1.40374263165713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33587764-1	2.50840734510823	0	1.47301272789002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120744098-2	11.3348060154964	0	1.29798905139282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64795996-4	45.9194752220204	0	1.27773710435372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63824478-2	4.61671069616487	0	1.41753577314334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57745626-4	18.0142850026155	0	1.27675308771751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111046407-4	25.290950523728	0	1.28115316139286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137947025-4	20.2255722162004	0	1.28374145293078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91851846-7	48.9406086601598	1.95205151391623	1.22811287076905	1.58947240142011	0.111953780088115	0.675102602115927	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr10-130542210-6	45.0388710634124	0	1.28755528140925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12856118-1	3.06659493681302	2.3652619503843	0.836941328889432	2.82607856577336	0.0047121704857328	0.0622063621334738	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04171051405144	3.62396845196869
Merged-chr10-44327319-4	25.1035029034559	0	1.27858435090694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24164714-4	46.0219183760664	0	1.28072319737877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16883717-4	17.9066809841987	0	1.28204011489627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37228090-4	28.3189145356448	0	1.28655368528278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23007761-4	27.8001125406388	0	1.2823555145373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73138731-4	33.2682453064763	0	1.27630725418396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99211687-4	34.1295351178263	0	1.27741612275208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36065058-4	30.1418851454893	0	1.29219721322798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6646575-1	2.18404640173176	0	1.48858362838999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95702391-2	4.52879633994022	0	1.34007239707114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83541165-4	21.1210019751877	0	1.29785090218451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135942362-4	28.0449280811826	0	1.28132950737862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34484575-4	15.5579767273921	0	1.28208137126107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75757524-4	17.9258088594093	1.48219833453802	1.12474059960728	1.31781348966646	0.187566091040184	0.973448795577149	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	1.69486619385668
Merged-chr16-13373143-4	10.8933061000203	0	1.28443265627175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19002162-1	4.33508328409762	0	1.43381117035324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129229360-2	3.69757929062598	0	1.38889162992078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121842821-4	20.278310778745	0	1.28814846239607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64914768-4	13.0846721081218	0	1.29513716463591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53104641-2	3.0635082244904	0	1.37862335465688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165736269-4	21.8739271464934	0	1.27797342586901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81446323-4	20.3140981480888	0	1.28495941298038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38085025-8	204.292560171458	0.382381541046097	0.191047198495195	2.00150300060911	0.0453382107343341	0.345299617557785	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.51635833151026	7.89541504924291
Merged-chr5-99248746-4	32.8693021160167	0	1.27830702531526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5615020-4	48.786561855074	0	1.28038640152873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12036794-4	15.946404037949	0	1.28818207156121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88059325-2	3.35841132097651	0	1.36289996711581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95451079-3	26.0090486646869	0	1.27913879054914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54811792-4	13.1627008640445	0	1.28744328954267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126919241-4	16.0493524378317	0	1.29281168021669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30676578-4	36.1310692340085	0	1.28103744233016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78895965-4	23.2851262035587	0	1.28407326342463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156660853-1	2.42269122913602	0	1.46366042315969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160171285-4	25.7448767039536	0	1.28405683412915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32146439-4	16.6697985174198	0	1.28390380816534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-16380343-4	14.6244460092812	0	1.27985504582739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46405246-2	17.0287966872442	0	1.28033733133129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134764470-4	17.0760491955392	0	1.27971231644655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59419406-8	71.0730053054404	0.197033607093046	0.246005266751629	0.800932474718009	0.423170738608556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26139845913186	6.49017668244006
Merged-chr5-65832396-4	40.2081518223686	0	1.27942504583243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69538060-6	43.5673662212626	0	1.29035047200124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39619960-4	22.2967695317772	0	1.27615565276794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5845831-4	25.6579144502474	0	1.27624472575822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16990349-2	3.21534068050417	0	1.37881898424087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112633161-4	29.6403751865751	0	1.27824712113942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70021598-4	33.3580411556584	0	1.28297111060157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63541224-4	20.2639804709041	0	1.27627948623858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41466841-4	22.4279516038851	0	1.27684142129462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21567903-2	6.93947997481249	2.20152249104357	1.09302109737909	2.01416285222902	0.0439924384238968	0.338721560180036	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.793480537552656
Merged-chr8-120319630-4	17.669690585478	0	1.28321448042736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34193027-4	26.0675983616729	0	1.28856627923477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73533643-4	12.2439845155775	0	1.28491036202859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118655162-4	28.422495042633	4.35596828568279	1.00100529447114	4.35159365264313	1.35151569483085e-05	0.00064370367780187	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.86719832675847
Merged-chr5-43187494-4	34.7356270866592	0	1.2818600346913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73769938-4	38.6889497549242	0.802857494223626	0.508421012204915	1.57911942061915	0.114308667933859	0.68509714893203	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2957311111319	2.54473282581218
Merged-chr8-122564747-8	41.719528957733	0	1.27454057483584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100602444-4	20.0598832404729	0	1.28711835866407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40318309-4	8.30537794534991	0	1.30081098681361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17876852-4	32.1395748995164	0	1.28347427816775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108937081-4	45.7035984821384	0	1.27833477928406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35106772-1	4.29203083540377	0	1.3230432510158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127266216-4	27.1761740120425	0	1.27560111260683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96122755-2	3.53643035643703	0	1.36188456351992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94632106-4	15.5527587175871	0	1.28009901242329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38395294-4	23.9375175735992	0	1.27821380994868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129233013-4	61.63582477929	0	1.2810334620024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48196562-4	27.2059547205201	0	1.28160827723931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115516258-8	122.03432205866	0.532867636927953	0.155532479645482	3.4260859091462	0.000612346670850649	0.0128761584642542	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.08788120805757	7.60694496703915
Merged-chr8-126551192-4	52.8871900352547	0	1.27808094236423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21412281-4	30.0570845039074	0	1.27590709713197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16434797-4	19.4999691453784	0	1.29445092406588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45339513-4	55.2494386637104	0	1.29160885765798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146616058-2	18.509416649728	-3.29208889945911	0.441435899822971	-7.45768275933004	8.805737474465e-14	8.71848062130894e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27593526208544	3.13000510991743
Merged-chr10-68735937-4	50.9631207052904	0	1.28063347498128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95708350-4	59.4882359941796	0	1.27824198380822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114667625-4	31.2884636535478	0	1.27971229082805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173412125-8	145.738711267343	0.226127723659528	0.12805807680639	1.76582164357668	0.0774257761961739	0.512974224000323	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.17161029824397	7.40887886843395
Merged-chr12-77060200-4	20.3871127104955	0	1.28410976994932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73433773-4	20.3459567457511	0	1.27896950746701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5269333-4	22.2793469026324	0	1.2786632649608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87033713-1	1.97139145799134	0	1.48045379984434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139287298-4	26.34974954354	0	1.27915457619859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84751600-4	18.7787298979578	0	1.28503453969354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27258599-4	21.2086445494411	0	1.28269650728777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128980494-4	21.3616517775061	0	1.27886142365755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136657697-1	2.18448062806545	0	1.3950062611247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64202775-1	2.02641893308867	0	1.49920430457807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55793617-4	17.4793935061045	0	1.28670936207354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83005051-8	103.593040797921	0.0762492232826077	0.178115889766367	0.428087709539128	0.668587264516907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.48766607716485	6.56819909067819
Merged-chr4-120879653-4	34.7489478165343	0	1.28297076282347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66872731-4	27.8547590605457	0	1.27730650869571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52188804-4	14.0540057315955	0	1.28239009627823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157933829-1	3.22711601082386	0	1.3237913160816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44206326-2	11.2270562869401	-4.55629571834032	0.75373492990701	-6.04495763371672	1.49449268017094e-09	3.60365751580998e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75374496218194	1.20275690226768
Merged-chr4-132600679-4	28.1952360663361	0	1.27967047290373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39491608-4	22.362461744559	0	1.28450463746497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11321274-4	17.9906166725291	3.91742141005268	1.00370397466644	3.90296492683965	9.5021476413883e-05	0.00304376146948117	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.99834080004871
Merged-chr13-119631912-4	19.0125842418233	0	1.28016721912893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103692327-4	39.7548601492958	0	1.27669754202044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64876475-4	27.7204327336661	0	1.27519093501836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76587501-4	43.9092023583615	0	1.27569005123934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-16141-3	225.405433956709	0	1.35014706713277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65138288-1	3.58264796667792	0	1.34962980295943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12364240-2	6.56271637214649	0	1.38769340384466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143114691-4	24.9365501683617	0	1.28025415552982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-98666868-3	70.6972704754496	0	1.34533407216817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111449482-4	16.275054202924	0	1.27934955144647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68032618-2	4.55185581557781	0	1.35842930609516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22028836-4	15.7980450832763	0	1.28020572137902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59055062-1	2.10797900614618	0	1.59103186049866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89462012-4	13.4653226352525	0	1.2798240012298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75855594-4	44.3718254042064	0	1.27914438543128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55097887-2	8.6429067999856	0	1.30631823493364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-7632-1	4.01441363966969	0	1.6502562468942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101134524-4	28.1938427556447	2.88256794104345	0.711732278611392	4.05007335998223	5.1201579174102e-05	0.00185466651480647	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	3.23984995384639
Merged-chr15-59752460-4	14.9563501303514	0	1.29001287551416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54122005-4	18.8042211998949	0	1.29303880162681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22095945-4	15.6739432903611	0	1.28070683323939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178369048-4	36.875845351978	0	1.27795867836817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84272723-1	9.20677670943498	0	1.28806827189241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55735977-4	25.7484760766352	0	1.28817309392813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116989492-4	29.0959597284691	0	1.27771265736503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131184530-4	15.7138202398502	0	1.27901674378881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120112638-4	45.0032897217385	0	1.2767166176885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6461592-4	18.3968321512173	0	1.28835144627511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67610908-4	17.3447027470477	-0.971189706235328	0.574670596898472	-1.68999373115119	0.091029153965439	0.577681955426394	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91303678046397	2.21307952544685
Merged-chr10-96094157-2	3.93405382936184	0	1.4667797911764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35567479-8	113.795879120399	-0.315175221510542	0.163468518529254	-1.92804843615279	0.0538491017843087	0.391173950220663	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.59771803882757	7.2584286011323
Merged-chr13-55895754-4	38.9068308122922	0	1.27759442539001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156028595-8	71.6705073306127	-0.340684157539482	0.185060814286592	-1.84093082510642	0.0656316964911434	0.453118736282119	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24235712965927	5.88187138252659
Merged-chr1-130918445-1	1.88343397657673	0	1.47757852753519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39784073-4	45.9578804728035	0	1.27865287165755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81112353-1	4.10037464422182	0.69099652282079	0.86736702536764	0.796659894383125	0.425648582140796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04330558830477	3.23943310347417
Merged-chr15-96638286-4	81.3495239591545	0	1.27913738989994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107708423-4	22.3125540285747	0	1.28399123456465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36465210-4	30.8259476523902	0	1.27844608812677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26605842-8	159.633405444375	-0.529356542064847	0.153736347629675	-3.44327512801318	0.000574714319443287	0.0122489503973715	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.79246444789093	7.25877163834986
Merged-chr19-60165485-1	5.03340339798949	1.27740250512404	1.05139673696566	1.21495764654038	0.224382245451149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15884989792392	3.36044541526662
Merged-chr1-184022571-1	2.37752642707309	0	1.47488667641275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43354620-4	36.7542251435174	0	1.28105126784907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8240839-4	33.5435947999933	0	1.28117220128881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73475832-4	24.0874056265355	0	1.27849650054273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34783268-1	3.00414175011328	0	1.64977399115482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3133585-3	21.5322620696927	0	1.29529514080483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129788911-4	19.3355157737008	2.81642898033389	1.10286176845434	2.5537461365454	0.0106570925558785	0.116493537998735	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.04220233489076
Merged-chr15-66950357-4	13.5780533579347	0	1.29004359998435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-98996161-4	18.5747592753599	2.24421122161392	0.926585169359393	2.42202367987983	0.0154343447631051	0.153185402929809	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	1.88903407179563
Merged-chr16-33347350-4	14.5419718248226	0	1.28411356834601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8772598-4	29.9411141156636	3.37373716841486	1.05264691847575	3.20500360491254	0.00135060789015376	0.0239048816874289	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr1-180261152-4	49.4417592730849	0	1.27579604968484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59051277-4	25.5232242571613	0	1.28101536340377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84355444-4	17.919537220901	0	1.27939515829663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87831766-1	3.29879906000629	0	1.36953511699195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115045321-1	1.62060029000143	0	1.52981603040444	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57571808-4	23.6271076746987	0	1.2796573737264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99641124-4	13.2342917576135	0	1.30033398869725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107624740-8	72.9223443640764	-0.784100443842288	0.268560344035318	-2.91964342933361	0.00350432093298809	0.049694738647361	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.49029816968616	5.7091872692259
Merged-chr16-24822673-2	5.079575031917	0	1.3635144199097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9531863-4	16.3715008299831	0	1.27998973161679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46686924-4	19.9977677294198	0	1.28507344060236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38473722-4	19.4871709360987	0	1.27855389379693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117304571-1	5.13959326830975	0	1.3158447392188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-44383199-1	2.75507617938478	0	1.49326921335831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32405498-4	13.588401459659	0	1.2864220491709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11026456-4	22.8696489869753	0	1.27935291853776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98688851-1	2.95450854127429	0	1.36980040999404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155404824-8	67.4998063881755	1.07341490811085	0.180716949842042	5.93975777617472	2.85443514043412e-09	6.05603632100026e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64817512608258	6.78234866300542
Merged-chr5-140379415-4	18.4215057888497	0	1.28241406148222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30270327-4	31.848901948625	0	1.27891468929752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-145178705-4	23.3532531135516	0	1.27874931510067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27411940-4	18.6123526763152	0	1.28423697819994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48424811-4	22.5944930444712	0	1.27603602570503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158136029-1	5.87019725368424	0	1.30514741137668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-35128134-2	8.49034049754844	0	1.44852260476714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135468540-4	49.3069731011097	0	1.27925850647329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52802545-1	1.86625688123508	0	1.55658702166333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96377730-4	28.0704089720681	0	1.2808104297796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18195315-2	2.85357252783637	0	1.9129847958594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125118140-4	26.1080558411617	0	1.2773683072421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56104456-4	27.7802087071432	0	1.2858233073091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113918882-2	3.53113520156449	0	1.42046267017156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72552824-4	60.2843163452104	0	1.27811917455691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84057270-4	53.2683534852729	0	1.27742075020007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94296120-4	16.22234927123	0	1.28729275034029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86202869-4	37.5516343613574	0	1.2775671652455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4488575-4	26.7080471343585	0	1.29083993636525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119065634-8	89.0057850243302	0.271065825368312	0.222841083879889	1.21640866508447	0.223829284738683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74639407929129	5.98939975118692
Merged-chr16-55790545-4	16.1887441623932	0	1.29034118730714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99179087-4	19.5212290053747	0	1.28232974682363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45251806-2	10.0527280446765	0	1.31672192257932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83659022-4	17.6119342964679	0	1.27983785766798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6451405-4	11.7015426706359	0	1.2911735387824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54441515-1	5.47738580958546	-0.711784503633223	0.837212093242996	-0.850184211835831	0.395222678051299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68141065781008	2.42139546294927
Merged-chr16-55757770-1	6.45692780936862	0	1.34670661479458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77964218-4	34.981823869	0	1.28225474418497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84380526-2	4.45036795856702	0	1.33395138102998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54691405-4	34.0816042541773	0	1.27639893757867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60848682-4	15.6187699368657	0	1.282090420446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144330514-4	36.6662736291513	0	1.28003636105521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17891738-2	5.10970396861911	0	1.35421976593568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102365254-4	28.467088921625	0	1.2762216007658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6104692-4	11.4107366280624	0	1.28513478397217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84882048-2	3.8800249139356	0	1.3705367016889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3105547-3	49.2991294636707	0	1.27917357454147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50760135-4	23.4744279291334	0	1.2816392737113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180231860-4	20.8502193500403	0	1.28267000974357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135439427-4	29.4649342118709	0	1.27587395704912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63831235-4	13.342564260684	1.35922898380904	0.798951553810854	1.70126583686553	0.0888930800063699	0.567044826834854	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857370518835178	1.9069419865589
Merged-chr2-132266331-4	32.3385255890388	0	1.27962230379917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54954254-4	27.0978167747408	0	1.33053276906863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116376215-4	25.2761362561017	0	1.28078869209584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191990201-4	22.4878066601156	0	1.27932157489883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117304138-4	28.2079313781498	0	1.27810229481829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84982096-4	19.4446506101239	0	1.27672268855702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144904133-4	34.1003262108509	0	1.27708206241406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59237835-4	28.9072862553975	0	1.29637223501117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89028073-7	56.8784119873604	0.897314615531969	0.235025305803576	3.81794893304768	0.000134565770202099	0.00401797849583454	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56278343842293	6.43711825078826
Merged-chr13-60876738-4	17.1076117164279	0	1.27914808671571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135070017-4	25.6232477226741	0	1.28249295857991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139366353-1	8.00522561136287	0	1.31675249588084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101027343-1	2.38291872886929	0	1.63578334238325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126740336-2	4.69058711832177	0	1.32798216175517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94969159-1	2.74149259635998	0	1.38603460270814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60795312-4	17.3800898108673	0	1.28252526986801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39490810-4	54.0650932363144	0	1.27501948918088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77868107-4	12.6533719399414	0	1.281470846823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69222138-4	11.4555465701767	0	1.28944351230689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19838396-1	3.35175023946188	0	1.39286310511914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136485967-1	6.1022071502828	0	1.29944518617917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90235433-4	18.6004675485468	0	1.27885216522841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108997206-2	6.95666109663081	0	1.32474778053955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68474741-4	24.308877085164	0	1.29999503978724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90559130-4	19.4526389396933	0	1.28168427092238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93599934-4	33.0399906104029	0	1.27839207710483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129434431-4	48.082825427727	0	1.27625622410157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90115691-2	4.78330655301284	0	1.40279633792937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94187518-4	14.228557148786	0	1.28319480844408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34850308-4	10.556312109844	0	1.28714451963123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55464996-2	2.15646892454393	0	1.44803828864857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85395671-4	33.070177707941	0	1.28179373023731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51938901-4	19.1498128151364	0	1.27923836502448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180250245-4	17.5262659028231	0	1.27771070655808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160225661-4	37.7198727639135	0	1.2749382009044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72538909-4	25.8687163535468	0	1.28008332294692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-93511032-4	15.5094299115134	-2.14657514584021	0.996972605962059	-2.15309340798668	0.0313113382320765	0.264932112924158	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95864583065558	0.729295484888209
Merged-chr2-153170627-4	27.1087309798008	0	1.27804158850773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33009956-8	70.9871156987006	-0.194464105940323	0.210039070573811	-0.925847297881589	0.354525343104236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13633455004354	5.8651184850561
Merged-chr5-65724505-4	24.1595924836117	0	1.27840491239168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-42512505-1	2.20464413483435	0	1.78273337041731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17182339-4	14.0686172663739	0	1.28099440965914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191119477-8	67.459775850271	0.0641413272434816	0.215187090759642	0.298072375145988	0.765647925198403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.36295923370346	6.41215891787948
Merged-chr17-48418432-4	14.1758032116164	0	1.28309188823703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-26441699-4	16.6084067584286	0	1.28214361436509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80553848-4	15.6098806546888	0	1.28427159798278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123952224-4	15.3618335575898	-0.0812318820534669	0.524855475436265	-0.154770000229008	0.877002642536797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65373926725942	2.23349578644154
Merged-chr5-64810094-4	17.5627221248345	0	1.2845750607191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74115686-4	15.8391844974443	0	1.28583736979098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135713641-4	41.6575453750542	0	1.27441223593214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51326978-4	25.0565552037831	0	1.27836450990219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137880397-4	18.5050391142722	0	1.29158021852048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120108039-4	16.9493948742482	0	1.28898530765952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73770731-4	32.9511620036747	0	1.27934542930803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71668307-4	24.355719467995	0	1.28587931376629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150914528-4	52.0243863074371	0	1.28089287865006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109413783-4	30.8996887913708	0	1.2841941609311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21332351-4	18.1338113988577	0	1.28057007217556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67690210-4	19.2550008306157	0	1.28043963292317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63078516-4	38.6113135905924	0	1.27862646149864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21814032-4	13.6018424480073	4.26792917810791	0.998922947022488	4.27253092025708	1.9326674384698e-05	0.000857094292870868	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.43913759844939
Merged-chr3-79552341-2	5.19187713872175	0	1.42998086861428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-4319581-4	28.4725443371761	0	1.28232765382728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140790574-4	26.8221587975116	0	1.27894685877562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-53607272-4	17.7664419002295	0	1.28051282094305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80454201-4	12.5522726404748	0	1.28688312936039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117352472-4	25.3114550951532	0	1.27933157058877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108639310-4	65.2044181615569	0	1.27592101238107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33756151-4	30.512053998312	0	1.27934946239096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57541622-4	20.6782180094742	0	1.27754345481724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34291763-8	94.9245663832675	0.598183113666122	0.238781669531417	2.50514670929301	0.0122400610950352	0.129402852663998	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71371193340619	7.2693225139945
Merged-chr15-34043895-2	4.5739191104943	0.242759745318556	1.08955836568095	0.222805636636855	0.823686780876006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0523346541408	1.03956264035389
Merged-chr12-95292815-1	5.50516729927163	0	1.31609857114409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65630777-4	12.4878298999989	0	1.28710653225258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11480204-4	14.6964854149897	0	1.28210545969758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110994833-4	15.4549867998689	0	1.284345645891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73779409-4	67.4158857092661	0	1.27926072083395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100152813-4	33.6166318467138	0	1.27856963162169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89742571-4	12.6482860966888	0	1.28088297452505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122853811-4	22.0450611786584	0	1.27820253235636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8912416-4	49.4114564767911	0	1.27782893533913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90177661-4	13.3245653015429	0	1.28449582367742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47214307-4	11.923413716357	0	1.28599397089741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-150478243-4	24.4302914311285	0	1.28033408470759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74381678-4	80.6205606682192	0	1.28015003212484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145103980-2	6.83288803599346	0	1.38268232113973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31468021-4	26.5090346825518	0	1.27932187012295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107341552-4	15.3819193860268	0	1.28591221172146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10857575-2	3.75665964061103	0	1.5733975997895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62756972-4	18.1965541629328	0	1.27635221818805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-129770857-2	3.86218083921233	0	1.34805048976069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38863588-4	17.8859611954977	0	1.28213728934008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167589486-4	53.5615541729699	0	1.28460618199856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31385055-4	29.4255282245769	0	1.27606231377743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133497971-4	15.8669716790221	0	1.28265295569217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24624564-4	32.378748725471	0	1.27860455690245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114194462-4	10.418273620307	0	1.28178320820825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5818109-4	33.2250753332488	0	1.28244397922867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42528367-4	36.3051036748222	0	1.27762754732916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81021585-4	28.5868533288589	0	1.27795970261599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65990269-4	16.2381041920524	0	1.28814200861325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107323442-4	20.7607775368894	0	1.28677993295134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39652376-1	3.37950025531136	-3.01060524156009	1.12395675327157	-2.67857747444192	0.00739356256895461	0.0875967237422647	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52660582253943	0
Merged-chr12-116054525-7	117.687850193262	0.209158382187577	0.184471158373091	1.13382701139956	0.256867118211841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.72410305587296	6.92769669178271
Merged-chr11-82023938-4	19.3241162534487	0	1.2841463637844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121461562-9	114.515065458373	0.282129050339651	0.151287818309112	1.86484975124173	0.0622024674322986	0.435377296147277	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9848615914891	7.23843794128742
Merged-chr2-158130834-4	18.8993524632895	0	1.28793840905129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142071052-4	20.4496614930891	0	1.30384030332977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80846091-4	30.9954583573496	0	1.28091231416803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22474816-4	20.3735274463063	0	1.27994296151567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107318704-4	31.5891255175755	0	1.2802184800186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58824819-2	4.46702869030137	0	1.35135020083725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17788689-8	64.1506917950803	0.417839830807414	0.281857691939623	1.48244962886065	0.13822069698481	0.782683679824039	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76604717724617	6.17111921199162
Merged-chr17-67474170-4	24.6187985338715	0	1.27813226642652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119424991-4	24.7086681755872	0	1.28041873080557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44608178-2	6.20557138019566	0	1.36569163048354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49905381-4	25.7076736563345	0	1.27955637789939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58552185-4	29.2357203969046	0	1.28015026597043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35294924-8	66.8993717103625	0.109413246057562	0.22643735543482	0.48319432916649	0.628957761475542	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39413354872209	5.5265943982725
Merged-chr15-79883481-8	51.9542492097352	0.0795660990070112	0.234730526812214	0.338967837236886	0.734633959470783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91691157199897	5.9332285017299
Merged-chr14-121873371-4	15.9070648279935	0	1.29127331334283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65674770-4	21.8067457917518	0	1.27598731970603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95279678-4	23.4622191327699	0	1.27754731948983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149193749-3	58.5151034410714	0	1.28143561142421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77540843-4	13.4130000325509	0	1.29246684750406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5416240-4	22.5075605465055	0	1.27909008862202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170934596-4	23.2481404979377	0	1.27703118050654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53505714-4	22.3422122135453	0	1.28625570619314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21718987-4	23.9721175378374	0	1.28926640544011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31593235-4	11.8423770679633	0	1.28688738193074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100925187-4	13.2395314392639	0	1.28675848150138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73222763-3	42.8742374317569	0	1.2770882531013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95900074-4	15.5968307129517	0	1.27923010449303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5828871-2	8.01460939127131	0	1.35194020149048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108248453-6	18.7181840888898	-2.77225000905233	0.951464309414113	-2.91366684133366	0.00357210901149296	0.0504153424330494	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4764476147008	0.469435083901436
Merged-chr18-5740518-8	95.5714374405294	-1.33321914464524	0.280289599538971	-4.75657729305032	1.96902869203674e-06	0.000138800592135742	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.05353939625217	5.69638142522932
Merged-chr17-45613163-4	30.2410021311301	0	1.28829938779214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17510334-2	11.6107512709621	0.737348414107186	0.83924268173806	0.878587838955173	0.379624791932547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4366045761601	1.51789747318134
Merged-chr8-66334449-4	19.84539350093	0	1.28039469702439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30593372-4	51.1282537229477	0	1.27708546134127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39526993-4	28.2068572825046	0	1.27689514237523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70224797-4	13.7726873381596	0	1.28288507149451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118818167-4	55.0610983791574	0	1.28231344559796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22811581-2	4.21871975804181	0	1.38698890432504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50870322-4	30.5668108688103	0	1.27409402471106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99033700-4	32.1580227851743	0	1.27961989050988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46719768-1	2.07504138579633	0	1.39600728601992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37893445-1	2.14258021411346	0	1.40067199161455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32306577-4	23.5716094719551	0	1.28249325509127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120978448-4	13.6555363568278	0	1.28046722413314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71027081-4	21.4894843612912	0	1.28033208103838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94292364-2	13.4720419495839	-2.47626738085822	0.693968564890873	-3.56827024470138	0.000359345765638478	0.00855127764071813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00166434392585	1.29451429493117
Merged-chr5-99382970-4	34.033712307869	0	1.27531499269575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97397170-3	14.1720761150889	0	1.2831290286064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25358110-4	14.7840289794991	0	1.28459347420534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87650704-4	29.8113383189135	0	1.27877906680463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33969435-4	22.3484693252917	0	1.28124075235536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19965457-4	27.3750411881827	0	1.33132210231098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92467205-4	16.5583486793622	0	1.28450509605194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50092976-4	12.172854929845	0	1.29639165724922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140505979-4	22.1068340922827	0	1.29742522122313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152914661-4	14.0092055795046	0	1.284102133926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146657665-4	66.1529576483517	0	1.27990692165229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27562340-2	4.9012305207399	0	1.36026900371385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20809887-4	34.2331604792212	0	1.2780365157935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30897945-1	2.13703003511371	0	1.39180649107433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54156094-4	18.3359925534597	0	1.27810110902072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59653862-1	3.6865183639021	0	1.33823064857207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3355199-4	16.515978714219	0	1.28684015853924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80150259-2	7.36775880938784	0	1.341689588347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137825242-4	18.3456034621949	0	1.28104977350294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79209272-4	17.234476936429	0	1.27818748007491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3198794-7	61.9048727848215	0	1.27741708685451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113766510-4	51.1785514335604	0	1.29244542409604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75792562-4	31.9303218457238	0	1.27656961395568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-100548131-4	19.2095042517417	0	1.27858070558361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32799784-1	5.00212183964071	-3.81081629102445	1.11253776584753	-3.42533656654915	0.000614038239749561	0.0129019108728858	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54723820890267	0
Merged-chr2-90504198-4	13.5162466001745	0	1.29668620017998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58197073-4	20.1669738577959	0	1.28300047338494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135686680-4	18.7447919878898	3.09569677601878	0.85561182982781	3.61810889950152	0.000296763531870603	0.00741012982560811	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	1.77720628303105
Merged-chr4-141929014-2	6.70929346527029	0	1.33600968106101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157457660-4	20.1851305795043	0	1.28717152338168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108918983-4	26.87098489902	0	1.28338764247735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70257669-4	17.1638393499988	0	1.27799274844011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16910124-4	23.3283668451769	0	1.28860389056681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-75124964-8	65.7970682534535	0	1.27479657680457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67108683-4	42.2023107736224	0	1.27751299997788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6824667-2	7.5761361625997	0	1.35921220181854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31394130-4	21.509764461597	0	1.30293849009367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6582953-2	7.50309269579077	0	1.30630058641889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3395085-2	3.81450218625768	0	1.54292715382965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82526104-5	59.6005436838041	0	1.2777815639126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55410841-2	4.07733772859192	0	1.87512425867649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141022279-4	25.414292484251	0	1.27719989605524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88516156-2	5.32810238488175	0	1.37353191537904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106674819-4	20.5075537750688	0	1.28941501066397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-29482-1	2.73589942971469	0	1.93489492879697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115142151-4	16.3987845179888	0	1.28466442367784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3145814-3	26.5804622283236	0	1.28535008741825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50570340-1	2.3490364497188	0	1.6007350389802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53532392-4	17.5312848903673	0	1.2874478657512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153351034-4	19.4628332963307	0	1.2808184780105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157715635-1	2.16877398123367	0	1.50211940648872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63372144-4	15.3220714755135	0	1.28589377917915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10449241-4	27.6299652767133	0.173558387246209	0.494509302438467	0.350970924895401	0.725610161168072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78199064368829	2.93016308902745
Merged-chr1-72428730-4	17.2781953013999	0	1.28491923639323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12211715-4	40.152703126661	0	1.28787511658745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58073032-2	12.3881336366933	0.427509804742844	0.679258133055714	0.629377528127114	0.529101926224668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05956455456892	2.63063970350352
Merged-chr18-5123484-4	17.1274702002592	0	1.27985554952599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119075520-4	29.8163010432072	0	1.27948580396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166472274-4	22.855968701319	0	1.27928251933502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19656201-4	21.3050742295635	0	1.28460220404164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75434291-4	29.2352428494798	0	1.28722590892637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115880824-2	5.49967556554412	0	1.38071049721325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142252299-1	2.07025755486026	0	1.51541007787644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93031787-4	16.0461176782802	0	1.28352713865007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162165182-4	19.746881134438	-4.37269156753533	0.799845143167149	-5.4669226973371	4.57915630128568e-08	6.43504403578095e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37589961105632	1.08186277552917
Merged-chr1-171631665-8	54.7731477653549	0.626828066235645	0.240297480009579	2.60855031110046	0.00909266443453207	0.103118578642647	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.085189947335	5.72954025153472
Merged-chr6-38968191-4	17.264748159719	0	1.27979294153519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27926653-4	14.0474300408398	0	1.29317043457814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29007424-2	12.0479633851908	0	1.29771304686547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30974363-4	16.1692119523232	0	1.27970280688462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108307450-4	19.2991614514581	0	1.28065693109889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128803191-8	184.740072993817	0.775266533331778	0.186928170926113	4.14740340897155	3.36267261376772e-05	0.00132932368190723	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.27931864998737	8.04791402652795
Merged-chr4-128660313-4	24.7782334129421	0	1.28199147911683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24245254-2	3.84514631971096	0	1.33889886159383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77268044-2	5.34015381475195	0	1.34632799166794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120540045-4	28.3849527606362	0	1.27615943404732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137815176-1	2.519196733567	0	1.36591992705237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100845649-4	32.3595683978812	0.947909989755692	0.875047287721578	1.08326715945127	0.278689857588334	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.932482832638212	1.4217268527323
Merged-chr2-60019310-4	16.2618532517908	0	1.2799216903178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-51926542-2	2.80909291832763	0	1.49160541730458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73935416-4	42.2970547254665	0	1.27771602706803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17394167-3	13.5627360747986	0.296461008213675	0.664784697327615	0.445950409817534	0.655633067652396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83197069115335	2.01628926503709
Merged-chr10-14103323-4	21.4575780208903	2.43031568758777	1.16034141032562	2.09448328393775	0.0362169506180649	0.29386071279898	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr16-55777939-1	1.37140235963544	0	1.56578765675186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12813411-4	47.7117407836518	0	1.27739014213118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64276496-2	8.35657529937626	0	1.29956344059736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76219559-1	3.11971738935974	0	1.37329502553288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30434034-2	5.49955980345629	0	1.43520405913179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67324011-1	2.2707427313697	0	1.50317063526511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-160509240-2	4.5495441131257	0	1.35607608630917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117865837-1	4.04126801890729	0	1.35272659617558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86579088-4	69.0203123516876	0	1.27412555473548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55215626-4	25.2142561227521	0	1.28174073490017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139493834-8	64.0693336910967	-0.120082743541336	0.257883819711505	-0.465646676381916	0.641468426654796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87517613589143	5.74721558947515
Merged-chr2-84405037-4	34.0418214229588	-6.27177412567083	0.816367223414043	-7.68254033943487	1.5596440755586e-14	1.95993272618178e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.90844404527753	0.683637474991079
Merged-chr8-36238250-8	82.9260440027435	-0.908366720977245	0.177822859364103	-5.1082674310017	3.25126265100902e-07	3.27865754927215e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.05023337665295	6.14428470451915
Merged-chr11-69419021-4	84.7782278753889	0	1.27859089368799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106819665-4	26.9859250757081	0	1.27595043379611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82383514-4	30.5414615862251	0	1.2815650489661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44937903-4	13.8579425118194	0	1.27814067035996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17800920-4	25.585884208694	0	1.27824055839723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66310828-4	20.52779710354	0	1.27547529738126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24039595-8	89.1855084979991	-0.376819611071474	0.203515234792918	-1.85155480598245	0.0640897778677428	0.445008930359005	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71696078167824	6.36365359145153
Merged-chr1-191190099-2	6.1153685583986	0	1.42122577052215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24593873-4	13.3049136465716	0	1.2836664162084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19327291-4	45.1038382357495	0	1.28132366989211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3156372-4	37.0422712859815	0	1.27693327373777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25830617-4	32.5160959317874	0	1.27962572782315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10023854-4	11.9681597890384	0	1.28820887724896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-67448002-2	8.71964940687079	0	1.30395866554096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107781486-4	15.821118642009	0	1.28109940168298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128811572-4	21.0425841172463	0	1.28697808686937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83666764-4	17.1412809753437	0	1.28374151383328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40128682-4	55.1703048152096	0	1.27617152946063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173459694-1	4.9505272872637	1.1423097105353	0.779393123492277	1.46563996538343	0.142746397391535	0.799786168562743	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45711357096226	3.58419536379139
Merged-chr13-101540663-5	55.8513357923906	0	1.27430482340493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27742324-4	22.2139090583113	0	1.27829136519267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105801417-4	15.9043564711882	0	1.28402681371462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119978380-2	13.0949942609786	4.62508786194462	0.958059509794453	4.82755801144014	1.38217432974559e-06	0.00010490077090773	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.3639050967461
Merged-chr16-32124543-4	25.0470950663674	0	1.29355681452695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115513925-8	90.8733625404326	0.433774063957573	0.189190567784303	2.29278905940026	0.021860152199976	0.200991334389836	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.54613555886577	6.95793540758453
Merged-chr7-34342247-1	2.29645967577114	0	1.50108564662922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86836859-4	17.9429541137885	0	1.28782079014472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127490164-4	27.9116514399874	0.129320003522265	0.611330498894359	0.211538609240257	0.832467007974004	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23621940541721	0.993458951033742
Merged-chr15-9131716-4	49.1730211599751	0	1.27655027115218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103785293-4	18.1113344316512	0	1.2786370892174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-37067489-4	11.5679490719249	0	1.28724439479291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101999224-8	70.1724423184272	0.34144894514495	0.222796883012201	1.53255710101767	0.125385018253999	0.732339059959405	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31333898225336	6.68764305466546
Merged-chr13-94743660-4	19.4378645494998	0	1.28070656972636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84365542-4	11.4913566553039	0	1.28948091885227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101800043-4	17.9508553787428	0	1.2847723839547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60262554-4	29.6028618536536	0	1.27945845508117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31994300-2	4.98248290745603	0	1.34259753553158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116616044-7	58.6691468567357	0	1.2823742854878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53774855-4	13.759676265074	0	1.28606433679464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59380033-1	2.04599655757374	0	1.45451137078737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7897248-4	28.2572580416566	0	1.27740393276875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125470965-4	20.3837671441015	0	1.27790951779054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31583262-4	15.3333451394981	0	1.28204270359681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21809710-4	25.8233441634791	1.54535976636012	0.481529682329856	3.20927208242487	0.00133071501548583	0.0236576679723283	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13140044632312	3.73991810985299
Merged-chr11-74837775-9	86.2631372161785	0.111452232342232	0.236971398701028	0.470319342136493	0.638126880492922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57200931134795	5.64950951954349
Merged-chr14-98956966-2	6.79001005773338	0	1.32871488563584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20401810-4	13.0411406388454	0	1.28803882123868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165643233-4	9.29298074244444	0	1.2868564044833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70950122-7	75.9302480486548	-0.77774491644715	0.194522169970583	-3.99823278017496	6.38171740638301e-05	0.00222055221319225	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.09978462435446	6.31526596895802
Merged-chr10-68737505-4	25.0795347897327	0	1.3020238904107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43385377-6	77.0843853595294	0	1.28157261971266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145740191-4	13.52029980695	0	1.28396455945821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45049460-4	71.362311650884	0	1.28174550997503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107869140-4	24.4235297144579	0	1.2768280275549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148489505-4	14.8999743636341	0	1.28075096562473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31168945-2	7.08990540715411	0	1.31886951018335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180973897-4	18.3847529821345	0	1.2817217998402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116462591-2	8.79464588175172	0	1.30787027606743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66147514-8	63.6888372934948	-0.214736426612639	0.22626437321474	-0.949050986514967	0.342594680922766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25000744627888	6.06729576201863
Merged-chr11-79118996-4	23.7611400582809	0	1.27719869455877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62261301-4	14.7577618527158	0	1.28343596413935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21889592-4	25.9678010502608	0	1.2796367500664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16015870-4	17.5932691619112	0	1.27952407328476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22883007-3	5.67501226000262	0	1.41807971015648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83714927-4	14.624667430919	-1.32703978797546	0.866962522534963	-1.53067722477236	0.125849185302328	0.733943228651035	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23189901584142	0.683637474991079
Merged-chr17-31305652-4	12.1921358216402	0	1.29511272710086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121427876-4	14.2680299792434	0	1.28771391528511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77406869-1	3.05925669973659	0	1.36839617030694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91206433-4	42.3618862457664	0	1.28338991767429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166623693-4	11.6422913613319	0	1.29326534581976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8842478-4	19.2472140120101	0	1.27853128815584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106230496-8	74.4425603418687	0.190769210188339	0.21971685988009	0.868250212079541	0.385257371546483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25851762518261	6.46737531873738
Merged-chr7-68830078-1	2.89499595410962	0	1.3617796755289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77304737-4	16.9759149151123	0	1.28054279406904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36642864-4	45.5153207804963	0	1.29290484921795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70644553-4	32.699362518913	0	1.27719319649094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60757918-4	11.708703982309	0	1.28771994700033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133468235-8	113.758578329741	0.156810992227375	0.1916125437018	0.818375400680524	0.413142863674363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.056069796959	7.19962640847633
Merged-chr2-102942260-4	48.7838276698727	0	1.27911417805248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72972005-4	19.0551043758872	1.32153543087933	1.28004952916337	1.03240960663692	0.301880273502095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr9-95571671-4	21.3915636225548	0	1.2891195349091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8021535-4	13.5476051654247	0	1.28363189512641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103721659-4	36.0939259741243	0	1.29206296552005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30645796-4	12.3681290222988	0	1.30020224277781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51908248-2	7.08667743874301	0	1.3115464022218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35762812-4	17.432877839959	0	1.27735373757704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58549075-4	20.0755088026825	0	1.29413083331683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37037688-4	25.6144526064562	0.146508909380765	0.24972012946911	0.586692429209589	0.557410293312263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83536469594004	6.01602741704375
Merged-chr2-167864414-4	18.3979964387743	0	1.28427805457913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94228997-2	2.17162460034071	0	1.78846056241142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-59817941-4	17.5496948689511	0	1.29780849340667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140811128-4	14.6068343349105	0	1.29366560087379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125572701-4	62.1825182061718	0	1.27810595904447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98708174-2	6.33683964267006	0	1.33414878343174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23314460-1	5.18012148988754	0	1.31540004477479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-103551-1	4.01487831691703	0	2.43325226455777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167337910-4	31.738594257611	0	1.27664953488228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84061828-4	22.4773300219447	0	1.28753396226934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4544589-4	13.6627871407781	0	1.2862024456954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66937329-4	30.4064362991918	0	1.27943679619657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131659748-4	26.3546455428569	0	1.27709340785685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69502526-7	83.3084061166723	-0.451018052353474	0.197181563486897	-2.28732364414711	0.0221769394029955	0.203164766890249	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56145624543622	6.09837580228292
Merged-chrUn_JH584304-68983-1	2.0530262540665	0	2.06035020493638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-59996828-4	24.7730964071122	0	1.27610021034011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13846238-2	4.30335556461943	0	1.36486556274393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116676308-1	4.27594738322914	0	1.3581637508635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-61999817-4	57.6015019415467	0	1.27710574245297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69667571-4	12.2854955782614	0	1.28344151826967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129536396-4	22.3612516800698	0	1.27947011618492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70497932-4	26.8626625484686	0	1.27874502794116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127084988-2	2.9284180385866	0	1.32771019512188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67290781-4	13.0716610695154	0	1.28263250543522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71250856-4	22.4071094531623	0	1.28182456241023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133467288-1	7.66488527586426	2.20107703357214	0.642584990374661	3.42534772293513	0.000614013023424885	0.0129019108728858	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04862768901207	4.50811240335397
Merged-chr17-84118402-4	20.8575344817307	0	1.28028953600788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72165042-4	12.111030760684	0	1.28136859912247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100881874-4	13.9325011742103	0	1.28906300249785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120499872-1	2.50811804527307	0	1.3897086653543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114913105-4	32.5734732277312	0	1.27773345497348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62576128-4	26.9500324060325	0	1.27944339265812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32917728-4	47.7534179277753	0	1.27737141227156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24608276-4	27.1246416812497	0	1.28275790114502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3685407-4	45.9459206878609	4.36905218675813	0.964334956907224	4.53063757096432	5.88059466391109e-06	0.000330415596653426	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.75033869392915
Merged-chr12-110776227-4	27.4420880468058	0	1.29277828879706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11375282-4	29.8099527378304	0	1.27582168585476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94241332-4	34.4936669760805	0	1.27626908164814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178342248-4	15.3388695312883	0	1.28195312664547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5764411-5	23.7938583898896	-2.22913032081177	0.41432872116399	-5.38010088837042	7.4444106956956e-08	9.63292002615693e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39404313914186	3.20674035406241
Merged-chr8-26697769-8	95.8688545511418	0.538840927548988	0.19397340706206	2.77791134212841	0.00547095435619453	0.0698619214213137	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39645450946858	6.94621398268577
Merged-chr4-133625024-4	33.4803746176142	0.114454383316544	0.291581969147218	0.392529015601635	0.694667376705947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39530016403684	6.53270721768928
Merged-chr9-116102100-8	89.4766447268734	0.151739251268311	0.215362188769687	0.704577029678056	0.481073497504963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45659238248943	6.59056623862371
Merged-chr15-43382633-4	19.3329149937959	0	1.28778742653578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108345499-1	2.10557963797456	0	1.49597240847197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103347616-4	27.3350906061277	0	1.2894500227651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105049964-1	4.17046991487656	0	1.40230010806335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51946373-4	31.0904580028956	0	1.28046020188019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53150711-4	38.5839516797779	0	1.27364024948724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68066394-4	22.7594299498625	-3.41425479941128	0.604645537647525	-5.64670470023646	1.63552401006109e-08	2.70569498636588e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58650866957402	1.64254215594465
Merged-chr8-11452787-4	57.5179603668113	0	1.27690506248749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11739755-4	43.2709306130324	0	1.2776780239734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4555425-4	32.4988356371076	0	1.27916176095166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81143297-1	2.36763561537889	0	1.36239536932294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48314823-4	18.6383804969108	0	1.28093675386363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22746954-4	25.3265443528291	0	1.27809099222457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109419189-4	14.4061371388208	0	1.28684420678337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12961885-4	47.1457328882091	2.34164669252499	0.89621374836051	2.61282165868208	0.00897981471005105	0.102157899032555	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.26927213904674
Merged-chr10-80665740-1	3.03145328239354	0	1.87069482109081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21628415-1	2.18522839909432	0	1.47516441829177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119372552-4	18.854345292206	0	1.28687035400571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113600814-4	34.725358017578	0	1.28183073128817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17900929-4	60.2087887883141	0	1.28132062840555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10418024-4	23.0288748416061	0	1.27675603980975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34034083-4	30.6669499880162	0	1.27957620492633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99339487-1	10.9855265786702	0	1.29467763208753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64619250-1	2.285476107565	0	1.41426628882133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85340489-8	80.1878493931478	0.0617145955425232	0.165864671731384	0.372078001290529	0.709834774801125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.84454135799201	6.9160763971326
Merged-chr5-66034489-2	2.41197253736586	0	1.41786946563321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120141313-4	15.225509883546	0	1.27827831691972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131001021-2	4.16694022949213	0	1.5533446228939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7884966-4	18.0435260683371	0	1.27776634894969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43530311-4	30.0340462657918	0	1.27946129304876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80417072-2	3.53871959058397	0	2.08090357192516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46881496-4	18.7917243017166	0	1.28214256039463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25302341-1	2.90021417889498	-3.55017127587058	1.29530169803864	-2.74080647099151	0.00612885949773788	0.0760972707123405	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56335845574247	0.382164212378408
Merged-chr4-102574407-8	109.086661181773	0.0655360733205024	0.232389316457666	0.282009837282865	0.777935967264808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16950456136625	6.20679694226297
Merged-chr15-72837562-2	10.3915022547597	2.77225465922599	1.12832620830526	2.4569620370601	0.0140117492574168	0.142388056200977	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr4-21755300-4	12.8112179352139	0	1.2873359670228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37261300-4	20.3803285794798	0	1.28453496715006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55666371-7	74.4832099908326	-0.784196895321994	0.239930826860191	-3.2684290951031	0.00108146270831843	0.0201624143046437	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40986577784597	5.67688917414631
Merged-chr10-86727785-4	24.7785745094574	0	1.27837480951766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105435459-4	26.6387263188902	0	1.28293932211576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89889632-1	3.90957076135719	0.412018484113339	0.893200890586409	0.461283109382973	0.644595501498471	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28322822149285	1.41959898789419
Merged-chr17-10725075-4	28.9327424804295	0	1.28302867116201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38365106-4	18.3734152887301	0	1.2846931141299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-36864238-4	19.4115608044085	0	1.27958500056113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-26362280-4	12.8529104548347	0	1.28501883230659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22801550-4	29.8771438000333	0	1.28019275504497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5816118-4	30.9257937772308	0	1.28764117029056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108765063-4	26.4704636001361	0	1.27508395301223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120454828-4	42.2683930138237	0	1.28009144688863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87433091-4	33.3416160875986	0	1.28063057334403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149792514-4	86.0919082914213	0	1.2855723945076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68160834-7	38.4922941991264	0.529798309571721	0.378665252979549	1.39912047752724	0.161776857994164	0.874614922022557	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41179197260129	3.77326394234573
Merged-chrX-38462316-4	16.5502361770807	0	1.28085871566126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68264477-1	5.44337402210685	-0.783557792187611	0.588894879699372	-1.33055629994204	0.18333504971104	0.95703883674849	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43001162302359	2.56481436735453
Merged-chr10-80982567-2	4.21621860143407	0	1.39315931283744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93564839-6	47.9242332394324	0.124048629119226	0.284181879102408	0.436511397246845	0.662465731893885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01397430358688	6.173802912495
Merged-chr14-103477446-3	25.8647819560592	0	1.27925711456933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95679908-4	44.0732335415531	-0.436923401093399	0.228533365644324	-1.91185825256431	0.0558943776334524	0.402520828833544	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.83241951225935	6.34591718737496
Merged-chr13-32904599-1	3.83563417365942	0	1.36193306077032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34945721-1	2.73171509233893	0	1.35560234320852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126827120-4	31.8515681034851	0	1.28312733951608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157513800-4	16.2471056040955	0	1.2780824637211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13980484-4	16.0743140877168	0	1.28162884931461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191894590-8	125.549290256702	-0.576506031801245	0.157963083713446	-3.6496250785219	0.000262623339419289	0.00671941454099173	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.25657573889909	6.68132247098367
Merged-chr2-32078715-4	23.5500288608422	0	1.2860517808878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50157934-4	24.6726744559438	0	1.30492990891398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88446729-4	34.742875353478	0	1.2786755656091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3159839-3	28.2697254455426	0	1.28384265946942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131435907-2	7.31537456200171	0	1.34009565069182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75709413-4	12.9402384800875	0	1.29138666980008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-43301-1	15.5757409784077	0	1.29078382874091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107381641-4	10.6540699804621	0	1.28712260628701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84095303-4	18.5953057642266	0	1.28319359820008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35776898-4	35.2109687612479	0	1.27759357734501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142504276-1	1.58350698122862	0	1.41730963567017	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21348600-1	3.2846479291929	0	1.56284335960035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40068905-4	17.287810820015	0	1.29405647421597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36640701-2	3.65807827628046	0	1.35499577091278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177709025-2	2.6535260248612	0	1.9195304056342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79140361-4	16.2825345886884	0	1.29265805386437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91523132-4	24.1600067951235	0	1.2774745770499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22807471-4	17.9365025464979	0	1.27976205982786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5804792-4	29.3109554137018	0	1.28151195375025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94160607-4	16.5329100518507	0	1.28705190752022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102417859-4	15.2713760777066	0	1.29344173323751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55321872-5	27.2435869036458	-0.979207335894771	0.316216419303173	-3.09663659481247	0.00195729661941081	0.0319274849955114	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03558551989571	5.07808350328669
Merged-chr5-104960551-4	20.2047998357911	-2.23450465029418	0.577956112156245	-3.86621856451638	0.000110535885415608	0.0034330218480838	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2564460252155	2.5421157536329
Merged-chr12-51845144-4	35.8082593194572	0	1.27528803556726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44234650-4	17.6556170031937	0	1.2821443925855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65524156-4	12.9711071924821	0	1.28545283008024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51916255-4	25.6071009092355	0	1.28605911211147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118103428-8	130.501547969444	0.546282817775785	0.230361918456248	2.37141113182533	0.0177203075110159	0.170562853824546	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76931090897707	6.31489821070286
Merged-chr3-103206632-4	54.8713496301362	0	1.28060610717773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84338942-4	38.9138732030719	0	1.27438576173571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5774044-4	25.7965947512496	0	1.27784414798314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103037224-4	58.6882641709659	0	1.27660557435994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62582439-4	14.966229806687	0	1.29016885890964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117475149-4	12.3176629137998	0	1.28206218611422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36641211-4	33.3178132764878	0	1.27931010708256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32583599-4	16.8921594602833	0	1.28447534083248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99165084-3	34.5320385910208	0	1.30599682702333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25632918-4	41.3910819572439	0	1.27879368094894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173018126-1	3.51043199314125	0	1.32213622331959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135314030-4	45.2897842872906	0	1.2838627385881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79580300-2	8.32130398959151	0	1.36364708557129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75512674-4	23.3754179709704	0	1.2818268964029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100440197-4	26.7446731365589	0	1.27774885897417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27941253-4	37.8709029809508	0	1.27380484857636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21189704-2	11.9086880295619	0	1.28738370934076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166639213-4	31.3759433411204	0	1.28328110896502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108995147-2	10.2476351969283	1.47364327391867	0.768765149499504	1.91689656441641	0.055251073637635	0.39889919985912	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581562804033966	2.08364730863447
Merged-chr5-97000715-2	2.88781679496792	0	1.40638630051637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94512449-4	21.6718881594471	0	1.2826206635813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83927988-4	24.9498763579761	0	1.28086421493508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127948524-1	3.2187935507448	1.28908863601752	1.35493398057464	0.951403282004047	0.341399694914332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-166138359-4	34.3641748381488	0	1.27579028609663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11437690-1	2.51090547258702	0	1.50709534362978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43912477-4	16.6709335851263	0	1.28000173814157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101155718-4	40.3492411165792	0	1.2735351628457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138237438-4	14.8818150350204	0	1.28151655211096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-141008662-4	11.8229990649452	0	1.28549086400376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70029176-4	13.5434529395054	0	1.2856858722655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8433085-8	58.7946817165368	-0.119106289021541	0.207193836889187	-0.574854401124116	0.565389771079581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20189805072476	6.06334415890626
Merged-chr2-11333073-2	9.088863126341	0	1.29531816613132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78482129-6	32.1880390791431	0	1.27646428173125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122868261-2	4.3410682446691	0	1.37503687194509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138521064-4	22.0090700955257	0	1.29615989461991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85792568-1	2.78603034147289	0	1.4042889772815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46366540-2	6.5103255748755	1.26416469200465	0.924712185333624	1.36708990327467	0.171597127635996	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	1.55500983080492
Merged-chr12-80832407-4	19.405036521566	0	1.28240690096393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68085780-4	19.9333044365338	4.07377774128073	0.978773693590407	4.16212426627141	3.15300677474574e-05	0.00126170471955012	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.9450324219075
Merged-chr17-34391666-4	11.6292159824399	0	1.29366341370823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8666697-4	28.4048470763267	0	1.27854555016913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146177475-2	5.10669685743725	0	1.69211107700126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108529568-8	114.261136351025	0.38260899597217	0.180279722185935	2.12230744164093	0.033811928979538	0.280354563011914	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67871284662506	7.0592969029221
Merged-chr17-26465209-8	107.300544830955	1.43980798225547	0.199546765294709	7.21539123988823	5.37791288383118e-13	4.03936891157279e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4960557128756	6.91142535082481
Merged-chr6-89412743-2	3.99081777731256	0	1.42422688313305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49173260-6	25.1170926260789	0	1.27713917566261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39251060-4	29.1241558930965	0	1.277776867717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127300920-2	3.67427647176611	0	1.34878210140704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26800048-1	2.19821570177058	0	1.48348968606713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6501044-4	19.6432964719297	0	1.27967508833383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37257696-4	14.8186805200654	0	1.28915596549856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81480535-4	25.8863211137965	0	1.28242584532782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55829019-4	22.3843394294101	0	1.27998120448519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51594944-4	17.4021433531979	0	1.2853823648987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114679802-4	28.408115056631	0	1.27832726123699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37883666-4	25.6407190520073	0	1.28140715286192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135471937-4	30.4106772911854	0	1.27787290848305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99241819-4	38.7904276915247	0	1.27729054394085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4266176-3	28.3092183592848	0	1.27821286376423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32168742-4	21.754042448137	0	1.3006170846021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-141080550-4	18.8833768031639	0	1.30390624822909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31280910-5	62.287138199484	0	1.2763822055236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120824522-2	6.17876931049678	-0.599144971078294	0.723499795694678	-0.82812044266442	0.407602293344342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50919286974425	2.45857341618675
Merged-chr1-162206890-1	2.54393324350383	1.28096285435367	1.37282806917636	0.933083233883904	0.350776995015142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-136127109-4	18.2473680761443	0	1.27734344417476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170709701-4	44.7696077959522	0	1.28315324566773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116146567-1	4.45381713903453	0	1.30593837254767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69571639-1	1.75457159564663	0	1.39831913072136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9767181-2	2.84458275019704	0	1.44029008437427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6357234-4	30.7693263301687	0	1.27780682210897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25285240-4	16.7566205544333	0	1.28599330727236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70805928-2	5.20386941560818	0	1.33696769044897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16086723-4	16.2740689357169	0	1.28989603672912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3941143-4	14.8370339716388	0	1.27952655729731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62543074-1	9.39719706929718	0	1.29555518655051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134189975-4	26.620610599053	0	1.28548492225032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114792821-1	3.27103888904415	2.25549283688375	1.25218392402227	1.80124723981334	0.0716639196178546	0.484276162497242	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	1.67113172082159
Merged-chr3-146655417-4	12.8874966057966	0	1.29242470561381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27490864-4	72.4555368472445	0	1.27735157088558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31882495-4	13.2792890655764	0	1.28365141907477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29485527-4	21.0243779811216	0	1.29214936538398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124478551-4	20.9038503832153	0	1.28275748427173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44118229-4	18.6790841449038	0	1.28310930839533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86471965-2	12.1149633589312	0	1.28320200044987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16295003-4	35.2767583573566	0	1.27738381292794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97380006-4	17.5768651635884	0	1.28071270657934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3173889-8	96.4072545001179	0	1.282648248249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83994121-2	10.4534707542304	-2.65509733055779	1.03827581248074	-2.55721774372649	0.0105513147861134	0.115627404999727	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23296906604359	0.727201944460961
Merged-chr7-25181645-4	11.4130222739583	0	1.28747772891503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51501481-4	14.9520551625133	0	1.28218348566239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-132426040-2	6.5645382158595	0	1.30490907282133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31233570-4	19.5627596360716	0	1.29062877230023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13685828-4	22.5480116421561	-0.674094015002541	0.644643762612942	-1.04568453787597	0.295706703913358	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0902839653809	1.68807364458303
Merged-chr16-91847710-4	22.5887438434197	0	1.29659263258866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149856953-4	12.4220119051786	0	1.28280518731598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111977938-4	26.2740263812516	0	1.27708103937363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58699314-1	2.35776845597443	0.0957133151924777	1.44182327418853	0.0663835276527534	0.947072484301631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr2-66180062-4	18.1539930168201	0	1.28279856403051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132323639-4	14.6666244677452	0	1.28239757717724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91734862-4	26.9277988640369	0	1.2802347249711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163664131-4	18.3013467028645	0	1.29202185963442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32996768-2	4.12933797496856	0	1.36382329697314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-18468211-4	27.4087907104551	0	1.27643625973537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68732433-4	19.2477710510625	0	1.29485947457723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81719387-4	21.1251564898302	0	1.27806821502678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108222818-4	35.7239626159284	0	1.27584943022155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51921946-4	24.4362098669416	0	1.27734420828846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77923713-4	12.5664048589936	0	1.28162945364496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31169533-4	22.0735670668833	0	1.30045264528608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12783406-4	31.4137476585077	0	1.27721316544105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74817048-4	19.2512826048658	0	1.28217641684551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62282658-4	14.2892088432016	0	1.29072594142993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66438683-4	25.8629580337528	0	1.28431253167902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17177799-2	5.19428739160455	0	1.35442621441464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44314476-8	124.875407538144	0.948626249890365	0.23905938510858	3.96816150706445	7.24292427147702e-05	0.00245868119191656	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87551677795096	6.78194529499317
Merged-chr12-84761458-4	44.3128859022712	0	1.28675383513244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97593270-8	41.7186542444399	-0.127948428059997	0.235029532990652	-0.544392980881625	0.586171074915739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74717182738945	5.60513141284921
Merged-chr16-85133687-4	31.6177796354104	0	1.28956692056801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53124841-4	27.6310300674532	0	1.28638578272941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49982630-2	3.15896325826678	0	1.36024472843201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13926168-2	2.92750899762796	0	1.3837828455884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54393377-1	4.65792406266856	0.262646360767792	0.742588007476829	0.353690549972944	0.723570805447288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56933968567161	2.20901759158499
Merged-chr5-115525366-1	7.39257235287462	-0.696592289965724	0.818283229687215	-0.851285062058516	0.394611020840755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47156348852587	3.08126271691723
Merged-chr2-66192047-4	17.0805583908741	0	1.29161586542468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72838248-4	32.7688287484564	0	1.28325440647501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49904539-4	26.7251434182472	0	1.2841311516578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17788056-8	77.949334453653	-0.347118064913711	0.273952609371928	-1.26707340262071	0.205129044844268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.36955699261222	5.98299343731022
Merged-chr7-19326548-4	46.9039073393558	0	1.29077466121193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37018647-4	20.985605889843	-0.640360564635809	0.790148750247071	-0.810430396093868	0.417692853962576	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43463693079632	1.03295826569721
Merged-chr16-24608617-2	7.02731966221996	0	1.32046374073945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17347985-2	8.61940049599462	0	1.31911559414269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189657619-2	3.75143134199049	0	1.39332454957317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110840542-4	27.9170099319566	0	1.27573991797745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32647763-1	2.6934797599032	0	1.51093016139144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35447603-2	6.04553052811394	0	1.33058494641636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-26361904-4	16.1325582970794	0	1.2810257338185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4541952-4	67.3308404963259	0	1.28145404267882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52061617-4	20.6514725630986	0	1.28930480406955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61469048-3	11.3734050119268	0	1.28897277952169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80032763-2	6.44261300168531	0	1.33328824782225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155201009-4	43.1262245566431	0	1.27727396431452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151686891-4	27.5698008106528	0	1.28215095587163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113677573-4	40.8045398716971	0	1.27518872975271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134060998-4	18.3417122155338	0	1.28002307078198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37356786-2	5.64622438677576	0	1.38558604007321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120526159-4	17.6601160892375	0	1.28489349240497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5803053-4	39.7612695873842	0	1.28155662746131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4530435-4	32.5817917596734	0	1.27915916974211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120150726-4	20.5722341889308	0	1.28081555185069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25909961-2	6.06786470527031	0	1.36169785268569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164868685-8	79.9897402824908	0.186544226019994	0.186689892828441	0.999219739182238	0.317688255727132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.63459936686069	6.87120035627822
Merged-chr11-11777033-4	18.4561357989304	0	1.29142972331017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99196419-4	17.0378325403055	0	1.28557001963867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99268461-1	8.03019137076106	0	1.31461896769683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94505457-4	17.4543657083649	0	1.27746587967441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114078147-4	25.9659344700638	0	1.2889523725101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44124510-2	3.74339857916249	0	1.34339845576254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34675080-4	22.9252136118017	0	1.28164278108683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-133047473-4	13.5609607205156	0	1.29279960008008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29947903-4	18.5434659309701	0	1.27901799497275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68194648-4	37.7673007828082	0	1.28821289252283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124690535-4	30.3432956489049	0	1.28390874124344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152543782-2	4.52229144460018	0	1.41186404594001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4065100-2	3.40733584783276	0	1.44075315315003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78205202-1	2.39826096425471	0	1.39318091558639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22398955-4	16.6775036081936	0	1.28198423584156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84202631-4	34.9183989659651	0	1.27789804493197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61706167-1	3.06269181202902	0	1.35038034383404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129616379-1	4.53816915927135	2.34351139921094	1.06608598529056	2.19823863323015	0.0279321049383029	0.242590554133219	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.48316304163271
Merged-chr16-95724375-4	35.3742341677825	0	1.27546969699489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5576917-4	21.1326344384356	0	1.2819368318952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40522647-4	15.7285888419075	0	1.27789468568823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109262034-4	29.4077642650789	0	1.28192391620535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30610842-8	109.06150816844	0.453498213764088	0.166831736293361	2.7182970329257	0.00656189010189953	0.0802532791687679	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.43145901011977	6.87834205936855
Merged-chr8-77443349-4	28.9971379627603	0	1.28037945976801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7040295-4	23.551935264736	0	1.29958769679841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142394440-4	13.4862182094644	-0.00949203115129473	0.998094884529597	-0.00951014908343943	0.992412113254021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	0.581381506691384
Merged-chr3-145105610-4	39.9286283363015	0	1.2744061948207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19669094-4	20.9296119561244	0	1.27934995179064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123573054-4	18.9621036148704	0	1.28437772611332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52630404-4	12.5736447285686	0	1.29245560905168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75504278-2	3.82979079984717	0	1.85192861499969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64721269-4	41.1039012313031	0	1.2797575965844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-132467218-1	3.09320872716273	0	1.43313804567714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-113656308-4	67.7205244658869	0	1.28034166070609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5874921-4	17.7797964991224	0	1.29430214317121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68871960-4	22.4509884431481	0	1.27821451934325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40098616-4	17.6057497975135	0	1.28793032414746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-87925578-4	18.5548321482223	0	1.28862985217452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20505698-4	35.0632774852497	0	1.27364013006153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92874222-4	17.1922065815569	0	1.29185993931435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117876633-4	22.8107120085086	0	1.27860467694121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26494697-2	2.20584902003718	0	1.60921540218667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114875253-4	38.7118372161961	0	1.28109242048661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91766495-4	109.722461854317	0	1.28157876080481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83981376-4	29.8783811093685	0	1.28451894809958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-71489078-4	14.6188605434094	0	1.2908625353664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89980891-2	3.88811456922187	0	1.40449236108415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39137590-4	13.8281596071371	0	1.28013454577982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31160689-4	45.165003040273	0	1.27736159111206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83616773-4	29.2705161989399	0	1.28459787027354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70842508-4	19.8138023795194	0	1.28058006466372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3868268-4	27.0986274245309	0	1.27417005886484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97348613-4	12.3987495729846	0	1.28512383435155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81751320-4	10.2617290466195	0	1.30272317486145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36709069-4	62.5144052405305	0	1.28084742485193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21937483-4	16.7359949444492	0	1.28744446449541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92921012-4	20.5327707695707	0	1.27733245621033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75155078-4	22.2953857532209	0	1.28785326876139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29678747-4	15.1199471480098	0	1.2854527011281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49046512-4	15.6772069431025	0	1.28589214889606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121147045-4	18.0684306298227	0	1.28887761376102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56094958-4	14.4305118055313	0	1.28645600094213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30676017-4	13.8790361758138	0	1.28169464568543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70720174-2	3.47402671590723	0	1.36591799111019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102366260-4	16.0964524750806	0	1.29498760494987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170898603-4	16.791622148979	0	1.27963951241248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153406397-4	21.1281652457563	0	1.28166967327064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184614936-4	24.8473369106863	0	1.27803645662281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97580427-4	15.6975750777896	0	1.28783637789594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128295103-2	4.48848252331064	0.0268040956215315	1.25962451687301	0.0212794330869901	0.983022750143762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.772096888724258	0.73596151290311
Merged-chr7-99377379-2	10.2530926196175	0	1.29314567286194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121315014-4	30.5553518622753	0	1.2800305177869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54089102-4	17.4724016285944	0	1.27931950113678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110968257-4	19.1263773054064	0	1.28323716972824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76957878-4	22.5396001283721	0	1.27547542646973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90881193-2	5.15131603426676	0	1.32692891648189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43795693-2	12.2764563599194	0	1.30972499180263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121600611-4	26.2261570289143	0	1.27948325951201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9826343-4	11.8765248566451	0	1.29781933066464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28209115-4	19.7593319208228	0	1.28539144089775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31110455-8	70.2380620413715	0.735273689345907	0.16281870477957	4.51590430191266	6.30471335977182e-06	0.000350032114874808	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20776702454744	6.9314436169633
Merged-chr8-46789977-1	3.2877825409598	0	1.32867026189489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74260190-7	47.8348237759445	0	1.27637888529958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127391566-4	11.5082470498878	0	1.28500528645217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82822142-4	18.5618838277138	0	1.27936555227634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131643006-7	48.4427378189786	0	1.275792846011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102922703-4	26.8973901959227	0	1.27591380055671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56265690-4	17.8363757590117	0	1.28256761433131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26498351-4	13.0856377673162	0	1.28683763250331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19830935-4	65.7411141862342	0	1.27702240924073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66444380-4	13.2121691720001	0	1.2902029664735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127600356-4	32.4771032187789	0	1.27576446212149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106691966-4	26.718787336765	1.50499869793373	0.407216706705101	3.69581766453316	0.00021918023785558	0.00586880615786086	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44120552124725	4.24943345517823
Merged-chr19-29420148-4	21.0593096719043	0	1.28045923929457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128321356-4	30.0627981069918	0	1.28158307162215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-92255389-1	2.33888652003894	0	1.39030112305071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-156087590-4	9.45615975718706	2.07900427078896	0.95825571413279	2.16957148298399	0.0300393236585601	0.256863339936178	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	1.5893535768094
Merged-chr3-10342719-4	32.327743755882	0	1.27700321704345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76149637-2	6.0712891554534	0	1.37089883714753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8969734-11	89.4919729196161	-0.158461134490401	0.171739217730059	-0.922684617904057	0.356171584205306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.43060640657843	6.27191228027382
Merged-chr16-92039689-4	19.5389683727051	0	1.28320758865978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82004949-4	41.0246484154682	0	1.27697759903469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67098359-4	11.6295925085292	0	1.2843168430611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136658982-1	2.9023774141677	0	1.36059101787872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25747709-4	15.834944170244	0	1.28598665655564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88404309-4	33.9054900948091	0	1.2792208142475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44381145-4	30.703619257161	0	1.27457720920721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180772342-2	2.62566378693906	0	1.47201799214862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55855789-4	28.1216074156506	0	1.28314609787696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55631805-4	17.5242940870871	0	1.28958000463708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75960779-2	4.73657714961533	0	1.36835229244646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19062722-4	65.9320440387171	0.378114241290457	0.23591276660717	1.60277142576211	0.108985127590697	0.662116154515644	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69486851908442	6.05638951898838
Merged-chr3-27280618-4	19.2113553499843	0	1.28193945006653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151536848-4	33.3225655319767	0	1.28229135517825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95834541-4	29.2201961368419	0	1.28513418807232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19419346-4	14.7302209220393	0	1.31976587787081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-164382125-4	16.8427288838786	0	1.28248796974978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42421645-4	34.2703802414502	0	1.27656327054903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41584690-4	12.4813994465324	0	1.28306913666443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73686939-4	16.7330500942205	0	1.28081964964067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97441660-4	48.9571858134315	0	1.27814009858976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76063277-2	5.46896950043459	0	1.46185359000745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50948276-4	12.1729360272262	0	1.2912093172066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56822318-4	58.8611896026587	0	1.28171830215937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40921417-4	32.2827489189846	0	1.27740330560947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57976568-3	18.1153279550497	0	1.29042966143045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25278938-4	24.0052953470733	0	1.27901710260329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95802938-4	21.015578854508	0	1.28330019081271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-30961579-1	4.12249112668629	0	1.37368847403484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122459407-4	13.0576155564526	0	1.28570395371315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29399389-4	19.695149501441	0	1.29244011725189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37230517-1	2.41073645288892	0	1.39426587970516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81199959-4	12.1312492257366	0	1.28772895220912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53265072-4	32.1423259538596	0	1.28722102578851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119432439-4	21.4681985586181	0	1.28451485904717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136126404-4	15.8000575131135	0	1.28746910666426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46174557-1	1.95209084301077	0	1.52655872320626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67706304-1	2.22035569959688	0	1.62245764655825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63255680-4	22.3141359053354	0	1.27916167114457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38788793-8	60.8101282670998	-0.168028704631981	0.217298503633234	-0.773262133988679	0.439367260703245	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77422100765419	5.61073097756734
Merged-chr14-8111736-4	33.7061919234962	0	1.27979112279815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63586399-4	32.0038923207966	0	1.27807210826374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64338776-4	17.026039128226	0	1.28234052314778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5349069-4	16.3398835710327	0	1.27726575312457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138125468-1	3.55948270418176	0	1.38959509868219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117088639-4	30.3936688191692	0	1.28211465474461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66477631-1	2.23588234330891	0	1.53448784275694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38565047-4	22.3183061986103	0	1.28034429602599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165477354-1	2.50875463380796	0	1.49941176282532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46789602-4	21.9733141539707	0	1.27630635461173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121706746-6	22.6984061928677	0	1.29196901864399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7987154-4	20.2768891096773	0	1.28191140882697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126773527-1	5.37440174098395	0	1.33442797390803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110459315-4	20.7118089829529	0	1.28451798774457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36165080-4	32.5143818460319	-5.23990624336725	0.811619801165032	-6.45610941951598	1.07428948171463e-10	3.71431325249334e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86114406795908	0.581381506691384
Merged-chr1-149947182-4	23.5054569920423	0	1.2778089147171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60847195-1	1.66267441584315	0	2.30749788316171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5636956-1	2.11327426825812	0	1.41281952262033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80014029-4	15.0481733911513	0	1.28382580251127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32561900-4	37.4709212416677	0	1.28610763432661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45949685-4	49.6759596693785	-1.98447116361231	0.291129442788962	-6.81645643464116	9.33135065328863e-12	4.80131054952598e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70657866950195	4.61666161647878
Merged-chr10-40077800-4	16.8099450506428	0	1.27923467181592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58735959-2	3.08026238828849	0	1.61227376545149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95540641-4	23.0893280422746	0	1.2822738143557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51817965-4	17.6620374669674	0	1.27767763435495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112395170-4	23.8245784733507	0	1.27685758976379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97531891-4	9.73703852744496	0	1.29301004911045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64040924-4	37.1499545590804	0	1.27673179140007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43411573-4	24.7319653938034	0	1.28002995918832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96636766-2	3.96376895325004	0	1.38919475174604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34059630-1	6.48355211956227	2.35969989597503	0.882440550674551	2.67406103920682	0.00749388103636933	0.0883926263903592	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961706022068083	2.57167923429536
Merged-chr13-89384882-4	44.4632837846135	0	1.28094617167863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134094443-4	20.028309659011	0	1.27837810492754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128491409-4	28.686525272611	2.63510508833976	0.774427442958351	3.40264941835419	0.000667358530840882	0.0137829363325943	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	2.88854826306555
Merged-chr3-95263423-4	21.4266822247839	0	1.27956625584589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122891717-2	7.91079768457647	0	1.38507538564692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114093390-1	2.1682250945016	0	1.38911551954724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95831730-4	41.5488662618579	0	1.27516014314265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166181161-6	38.4083119895048	0	1.27718913782068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31101039-1	2.99832007442188	0	1.47655642105307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72140634-4	66.7108784156526	0	1.27974171983631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52273226-4	30.0440111679435	0	1.28340150543097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65604515-4	13.8931865195594	0	1.2856452416574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55651294-8	123.047304242074	0.81513962185927	0.213267643494284	3.82214389629675	0.000132296448068949	0.00396016660353346	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11335119837844	6.93059679198035
Merged-chr11-23805986-4	19.0827279458697	0	1.28114740084114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54601282-4	38.264714104448	0.232832841929672	0.528071778551152	0.44091135218111	0.659277174906292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.577651410308	1.7864504728774
Merged-chr2-150837053-1	4.25426057019399	0	1.40501787684204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92832658-4	24.2845615946847	0	1.28015715344224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60852524-8	46.4861440788587	-0.226114929472625	0.238694450728619	-0.947298643862077	0.343486621689051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70188576101523	5.49349445384709
Merged-chr17-50157538-4	36.9722390336876	0	1.2772795230383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62265676-1	2.13149593749451	0	1.46305917497992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88953398-4	31.6242713488297	0	1.29298375037351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120578490-4	19.9962244384604	0	1.27679440230898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102976101-4	40.7018475912993	0	1.27808226984426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29814712-1	2.9673100540961	0	1.43137359420163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99169934-4	32.5168332498521	0	1.28021182540213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17773871-4	30.3994050688322	0	1.288045072224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68905829-2	4.46213741699878	0	1.3168107064883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97083952-2	8.26084810860173	0	1.33453392361348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105616792-4	18.1996462877394	0	1.28184326739592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22474288-4	12.2081856892223	0	1.29870738489341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25706992-4	41.225777566989	0	1.27980338306943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146120355-4	34.4254099657145	0	1.27509229969861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127288164-4	20.0098492349061	0	1.28501567876851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83404267-2	4.53808943957699	0	1.41879643706122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4261301-4	10.729495136533	0	1.2897370589857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80753868-2	6.60818885611962	-0.873383244020982	1.17644815694574	-0.742389912266459	0.45785112972948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.792886178910224	0.420961122473315
Merged-chr2-165987141-1	4.14686482256739	4.54464410882005	1.09224420000891	4.1608315327131	3.17090935961302e-05	0.0012668968794928	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.39996568317471
Merged-chr17-56074649-4	30.2560021476627	0	1.27892955371569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44120317-4	11.1054081240179	0	1.28317826429925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65089194-4	17.5198301288183	0	1.28401039251387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26230909-2	3.6032109559705	0	1.31835122926015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49592489-1	2.24793946322707	0	1.56552290700677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16238174-4	11.076054190895	0	1.29482304782845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64374925-4	71.2288860821361	0	1.27730351564506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3759653-4	20.5649979308558	0	1.27899859715051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3660129-4	24.047759455705	5.02365492120669	0.937535112363111	5.35836456145549	8.39786551778348e-08	1.0694118925473e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.71969401386909
Merged-chr1-134788418-2	4.0639782699232	0	1.90705686785037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-77741695-2	5.4117532363721	0	1.37687087947568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3209455-1	1.30739733375352	0	1.53332094694563	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66182784-4	14.8412581580609	0	1.28924279442111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167266495-2	3.51698059415959	0	1.52047230899074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12754768-4	35.6705548971147	0	1.28086112109814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19935454-8	35.4682273627797	0	1.27765961290822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120327279-4	34.8734782721276	0	1.27772697264859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79357779-6	54.2703666980761	0.743113366788323	0.57802538046311	1.28560681226998	0.198580318068774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81873897229011	2.6585960826409
Merged-chr17-8506229-2	5.08845327660391	0	1.32830357770881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40240714-4	25.6805536208415	0	1.28657554046455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85697663-4	25.4845485548119	0	1.27924136297109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36471746-8	63.4542873901153	-0.0731402064874913	0.193097707434113	-0.378773044275771	0.704856406031968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31921546735311	6.2035620848314
Merged-chr12-36036906-4	24.0861389595837	0	1.27553207676764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39681486-1	2.53440997108061	0	1.43123995305831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-93552944-2	5.8492208287533	0	1.33502657773185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119230769-4	20.2999236373659	0	1.28118330337232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91681265-4	25.0108647336249	-0.102605143841723	0.56734545282766	-0.180851266772894	0.856484321459489	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33048837705611	2.39460173764953
Merged-chr17-12755272-4	57.5202603926492	0	1.27770884926123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40152735-2	4.91642165572097	0	1.38793986533091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17866811-8	88.2643412597602	-1.26530654723382	0.274791390888441	-4.60460767399918	4.13244165566939e-06	0.000249573505019752	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.10747231790496	5.80117590463285
Merged-chrX-109142473-4	13.6174271304295	0	1.28289222284837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126251890-4	16.2103882050477	0	1.28066508572505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52628899-1	1.60596103527957	0	1.51193296716766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118042855-2	5.2805528207001	3.42712842777554	1.11250514014624	3.08055064565819	0.0020661821207607	0.0332062805861359	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.60572551668653
Merged-chr2-3752498-4	12.864837846058	0	1.28717815899803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84539361-1	1.35675063301681	0	1.60009844967987	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-5102780-1	3.04857079616395	0.604518437113558	1.04166433465528	0.580338998851883	0.561686033046666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09358799995118	1.72220530150145
Merged-chr7-29307941-4	17.0496768656131	0	1.27962333700829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16228757-4	33.9774309280832	0	1.27861582355144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149326877-4	26.4579086919432	0	1.28098587307792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38564668-4	16.4646007518349	0	1.27958926023338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-6717733-3	24.6688040748484	1.17388869811217	0.844424827404614	1.39016364750925	0.164479189542382	0.884031676249093	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.679533914075134	1.11779166918352
Merged-chr9-58271352-4	31.3075992202681	0	1.28063474499388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126852894-2	12.4480528923798	0	1.28299841183158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60260780-4	36.9050122373868	0	1.27509221048052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76599432-2	3.59020785310307	0	1.82614707673546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21339530-4	16.3262332819536	0	1.28262665924033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135489267-4	19.9078957515037	0	1.28008416594534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79161590-4	22.8251257764044	0	1.28687469680911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59003923-4	23.4529788615298	4.30212878424546	0.964892331903202	4.45866201025738	8.24728487568968e-06	0.0004337559953704	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.18907334447161
Merged-chr18-23882316-4	19.6402757605784	0	1.28045387038985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74390876-4	15.4765916186798	0	1.28167701785991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81971350-4	22.8510365532975	0	1.28206330186646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59261723-4	21.0248158653272	0	1.31728778591228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75834779-4	34.5084437430515	0	1.27754933862724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50083105-4	47.9554978274973	0	1.28223388508032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129436226-4	26.2742073986748	0	1.27984771784101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87407663-4	17.5594816581572	0	1.28315327487851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122863063-4	36.9552962725352	0	1.27744363897015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45591983-4	41.5071422637583	0	1.29405461624941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59236674-4	44.0128997201878	0	1.27736064607129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29289893-4	23.2356466211645	0	1.28166462799184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5574844-4	32.1137779024489	0	1.27867861556031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180777773-4	18.7716866950708	0	1.2800319623007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20000069-2	3.99879033493167	0	1.35445542248181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49852178-2	6.83896936762651	0	1.36213580820055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148465566-4	10.0392831424528	0	1.28501845197392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127240164-4	17.6703235372691	0	1.28476839442791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133481161-1	2.12021644206083	0	1.38627146751433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46804642-4	26.6522736606072	0	1.28288398304583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118107244-4	14.7520796823905	0	1.2888685341941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31352735-1	2.15454161289968	0	1.45120776162579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54884609-4	18.1921148707216	0	1.29119095668943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31331974-4	23.310337768914	0	1.27625601613999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30242756-4	17.773091809609	0	1.28676212525816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83536265-4	13.9215891202863	1.57733429143275	0.985334015185207	1.60081177258077	0.109418615334244	0.66407252137378	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.15307255889252
Merged-chr5-100861965-4	27.2927600618736	-3.4729270032977	0.58084442430798	-5.9791001823515	2.24373542923837e-09	4.9366712242091e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87287257171391	1.89431931278994
Merged-chr3-104442174-4	25.51926436382	0	1.28100717812891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85357602-4	16.4227417802317	0	1.27834708533268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90565804-2	5.47330936170672	-1.86943212957829	1.12398953131693	-1.66321133559666	0.0962701393550823	0.602285162881494	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7226517784382	0.306240821987646
Merged-chr11-50134369-4	32.6273550017711	0	1.28996277871578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75961658-4	32.5896401636242	0	1.28821189199988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82826325-4	28.9690820251151	0	1.27614584392802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3165735-4	24.505637317745	0	1.2966934628711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20423096-4	32.9023915406867	0	1.28093895565289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115423239-4	35.388389235711	0	1.27584198314375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78134600-4	18.6711324236828	0	1.27973341078231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105823409-2	4.48892313652739	0	1.37866188393047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131087080-4	28.5178635093132	3.75442533819974	0.99802555741645	3.76185290076005	0.000168659236767504	0.00478350975946586	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.63412505265868
Merged-chr5-118354312-4	22.3948747772851	0	1.283859132362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45651860-1	3.04362663326059	0.980013796828069	0.902676975578529	1.08567496827974	0.277622819060922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12038470799318	1.84001395625789
Merged-chr18-32361620-5	42.4586426365864	0	1.27511741490181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117962335-4	22.4093774846699	0	1.28145283290894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76319074-4	37.9908166913157	0	1.27892454988109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20829961-4	22.1421833945779	0	1.28303640274982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96466690-4	16.8396698602606	0	1.28013767671373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94178956-4	13.430226686176	0	1.2926728947231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74440689-4	20.4147885447213	0	1.28460492323627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105300148-4	31.3151740125043	0	1.27812694086297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8992352-4	36.1605385133795	0	1.27508180767665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32396989-4	79.592995948506	0	1.27718254783358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19888637-4	20.0870315342845	0	1.27730484963208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35752828-10	92.1852778409765	0.346849553056043	0.202157940347451	1.71573549107153	0.08621046579397	0.554588412854181	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30633341189995	6.65516563865649
Merged-chr1-64295546-4	42.8716945093335	0	1.28304834001504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91849065-4	55.1141957755919	0	1.27966998231199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91727148-4	14.2315535361737	0.739544283618476	0.600965373053607	1.23059383581574	0.21847481186317	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99662452815067	2.22281280114811
Merged-chr8-79415044-4	28.0910431244336	0	1.28101769172379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136454147-1	2.8863386255991	0	1.34933562693251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49251282-4	23.3086170905709	0	1.28464706464513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105506474-4	17.8551471658114	0	1.2787266024729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56025274-1	1.50442895985671	0	1.74490695003557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44482862-4	20.6589325353938	0	1.27760856457304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128845494-4	24.599897886968	0	1.27894921844989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34609667-4	25.9257670166186	0	1.28088399238286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70811052-4	28.3703350887664	0	1.27834516324826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53641286-1	3.56425638554779	-0.209442316852554	1.55934168333848	-0.134314575881886	0.893153827792397	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18464872609212	2.00209815734856
Merged-chr18-80169573-4	27.6788901142415	0	1.27510896965559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41161584-8	124.896593384136	0.523413394819572	0.209100297833254	2.50316905448391	0.0123086734856361	0.129939027074697	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45889845337426	7.01597974075192
Merged-chr19-9954618-4	28.6488052899778	0	1.27582196075243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8902194-4	22.2439439627767	0	1.28604646375937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7733981-2	3.57892653272516	0	1.45852625187019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125478811-1	2.65775584442793	0	1.44352275067581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9123200-4	18.4335655068045	0	1.28393137624438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119423956-4	16.0292742203821	0	1.28134735867844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76604144-4	35.8274726626501	0	1.27508239775021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87713148-4	20.764364660755	0	1.28136184532401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52165027-4	19.4974044758032	0	1.2810526492474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81691796-4	14.9354813799203	0	1.28922457992547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108151911-4	12.0300135045513	0	1.28642510026418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87408390-8	40.9489279542839	0.226892470837074	0.244971009460164	0.926201313931273	0.354341369850072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43437009991809	5.58367503218932
Merged-chrX-19202757-2	5.24694741543663	0	1.36825570305845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97429935-4	20.3184641570867	0	1.28298427595304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16868535-1	2.55779615211266	0	1.48900848505655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105900900-4	17.4173929725279	0	1.28535965311525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58743522-4	46.7232531224771	0	1.2763696288606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86114370-4	15.5419058310885	0	1.28884074123787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50834178-8	179.801991211831	0.0314523035163248	0.159197408552031	0.197567936578849	0.84338312318349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.28741238053331	7.31711295754176
Merged-chr8-117067146-4	25.5394812428494	0	1.28523340380345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22073297-4	20.0902983956064	0	1.27829448012494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123025407-4	24.7863764765054	0	1.28053250414159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101078906-4	20.6160064056634	0	1.2764437492654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103436478-4	9.87002512788816	0	1.29208774687344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103007909-4	69.7591117337152	0	1.2771610490979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82876997-1	3.15606687908986	0	1.36470115266774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46458470-4	77.8092797920953	0	1.27590811932396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98880270-4	45.426497510415	0	1.27528423332668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166650621-4	15.6702948988463	0	1.28385047685189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3960027-4	14.867956185136	0	1.28406825243243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75153390-4	16.9223400320094	0	1.28557519192548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72837159-4	39.6027537354362	0	1.27769261914362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51312239-4	15.9583175497864	0	1.28277840609572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131916606-4	11.1046040340399	0	1.28709825813938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86579441-4	18.6178444448822	0	1.27952300637126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11458418-4	112.159683129958	0	1.2798719271147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14207863-4	28.6238306826213	0	1.27536604777323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135192070-4	12.8705865887488	3.34596850094822	1.05676779423847	3.16622868258339	0.00154429335052354	0.0265491695036335	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26501898168246
Merged-chr17-34296220-8	164.457149393709	1.61746210896171	0.194223523515335	8.32783835699492	8.23318237012819e-17	2.24168972982665e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5922337680002	8.21364188294922
Merged-chr4-72379714-4	44.9388353802461	0	1.28080037167555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122387885-2	3.40981770679423	0	1.38891566884786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93243298-4	21.5924803286311	0	1.27707412865354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100814702-4	16.1298684960302	0	1.28046015879271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58978930-4	30.9099314122045	0	1.28184381534301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-74601013-1	2.09933673090761	-1.27059911696936	1.26540015008295	-1.00410855561071	0.315326292017022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9773197489919	1.4217268527323
Merged-chr5-92486927-4	46.9398891843905	0	1.28333716489112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54088443-4	11.8232508992402	0	1.2857999669938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79662055-4	16.6422288104569	0	1.28602096574145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143289088-2	4.21476069874642	0	1.37430907999331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77838074-1	8.74228491058431	0	1.30602692492111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46121094-2	4.385688174476	0	1.38883599837308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184852444-4	31.1347840792106	0	1.28505795175991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22724350-4	35.8225200527287	0	1.27874070886305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21457456-2	3.85386605474445	0	1.33238059349687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192537393-4	19.0698160892412	0	1.28682023997461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26941699-4	48.0833091638658	0	1.27566419884166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96627411-4	23.9045265768133	0	1.27988306027194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68068427-4	22.6551147596443	0	1.27890949435594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137953354-4	16.0974734767256	0	1.2768582362215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39261308-4	24.8804034328029	0	1.27533223871568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126144524-4	22.3191362461133	0	1.28037922201008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19186437-4	36.9516596364726	0	1.28435455299867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7734567-4	23.5147830452817	0	1.30991184276368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169987029-1	5.66696580561451	0	1.31681730606127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34101933-8	66.4344931533973	-0.135995773611517	0.264857619671745	-0.513467476525936	0.607624355624001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74162396515211	5.57676808918595
Merged-chr4-88864788-4	15.1641394945836	0	1.27715457367333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171983811-1	8.43023861551327	-0.568245452204764	0.942040136750328	-0.603207262659731	0.546370816824157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26204533803634	1.1517642783294
Merged-chr1-134065497-4	104.553215147253	0	1.28013306800213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24463959-4	20.1425421536693	0	1.27671689539941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82022804-4	23.6485623470714	0	1.28382941940901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19206541-2	4.8274530971972	0	1.43098125279439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51468594-1	2.06277523218718	0	1.50307122801718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97396766-4	29.5273853693723	4.80058792269053	0.943022712425701	5.09063870831081	3.56859409371668e-07	3.56020381142e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.1331985207636
Merged-chr1-67398251-4	23.2315506911029	0	1.27990922669087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65115068-4	29.6777267911353	0	1.28315276451265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71365226-2	7.28754770187162	0	1.30696340075434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124903769-4	22.5616790318841	0	1.27790254069354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58759827-2	9.24835706506772	0	1.32718053420749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84407114-4	38.4513062253706	0	1.27869361168945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98066686-4	24.5126316449603	0	1.28051462017363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25267174-4	20.5274048218759	0	1.28268009541792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40956086-4	28.2772430435682	0	1.27352051290447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127477974-4	110.658769449738	0	1.28039602427001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22781590-4	12.5820523831262	0	1.35379613968624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46277504-4	24.3205331338413	-0.528951752722881	0.251203701950321	-2.10566862118731	0.0352331473489736	0.288550601161302	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88630280883812	5.37030144991542
Merged-chr17-80112944-6	39.2953583996639	0	1.28303183469218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166623323-4	21.9829976366569	0	1.27680785894111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106345469-4	24.9365263946476	0	1.27608901203399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25541565-4	22.4830280652723	0	1.27606254843356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105558765-4	22.5476808831686	0	1.28902054272737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119055418-4	19.1458527758802	0	1.28325910042241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93889558-4	25.3201487708526	0	1.27996380986823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-44070369-3	15.0979432954335	0	1.28817745730275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146410066-4	15.2153372136789	0	1.28327593232492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96435310-4	10.9252979037331	0	1.28642360940004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16046576-4	15.7117330752148	0	1.28083238156859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152536672-4	88.8403834191714	0	1.27563982324854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124273410-4	40.3954787532414	0	1.28281478946218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122297832-4	11.408266878443	0	1.29574777277505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122870544-1	2.86452301030714	0	1.35889483243053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116189541-4	29.0097142651769	0	1.27541581876606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73620918-4	27.242341173619	0	1.27918270310994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112798198-2	4.320491299572	0	1.3730822443185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64376613-4	26.8856608673859	0	1.27804026259412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80779714-2	4.1070606125621	0	1.46673864097983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63080390-4	54.4377470560729	0	1.27720215737736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14586292-4	40.7250498151278	0	1.27848467026677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25705930-4	39.9902007836389	0	1.27562586396901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42270878-4	47.3508324839523	0	1.27555443817437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107724387-4	15.0345107754069	0	1.28174223057357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73149817-4	18.2430567519647	0	1.27552662945732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10288726-4	31.5654947247723	2.44239701036308	1.15414469760523	2.11619653534854	0.0343280957721397	0.283161290876829	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr2-62656282-4	17.0216918618858	0	1.28010311141833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159557695-4	17.611864725112	0	1.28279883022825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43811183-4	19.9033461489067	0	1.27846907910764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168541408-4	25.627216660992	0	1.28478439550572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47295944-4	20.8230091878927	0	1.29284168162231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25534749-1	2.88301675499395	0	1.55861282146159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101172919-4	26.4203563066516	0	1.27654434758624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8512021-4	14.8043128145594	0	1.28493554816762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44264408-4	20.683612795701	1.2800835671048	0.544805595024341	2.3496153101137	0.0187928222302307	0.178571435430661	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07417503468919	2.60391341779232
Merged-chr1-173803068-1	1.70410129286297	0	1.59673008620104	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32344029-1	3.49347211045837	0	1.35858598521824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3181568-4	23.5845541787531	0	1.28732884854797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19953339-2	3.08389846389301	0	1.44544688043317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75288753-4	14.7140561480083	0	1.29000214481453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15956576-4	25.0719740221366	0	1.27712497001877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-57707039-4	22.7119315015518	0	1.28040375186547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59604281-8	79.5470938666724	0.286541856721481	0.198862062113777	1.44090760035234	0.149610788599684	0.827812581865786	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74046426052783	5.99402290851668
Merged-chr17-47754394-8	90.4480306314311	0.0660506298487871	0.184537158961629	0.357925906199309	0.720398762997384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37136459462844	6.43248462476769
Merged-chr4-150349858-4	17.9416100773146	0	1.28115147660061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115516798-8	107.3087053474	0.648363585443094	0.203330529544109	3.18871734066105	0.00142905537723599	0.0249851793225939	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.4102883098271	7.02731213491409
Merged-chr8-115555638-4	17.2438439032236	0	1.29579531420277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21764136-2	4.47231416312523	0	1.34558423094381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57929556-4	28.1600540800129	0	1.28374831388367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75790529-4	13.2501162194012	0	1.2894920762298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-13602-4	459.939676970512	0	1.34159092829396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97479430-8	193.984956404055	0.850156500552124	0.167951933340917	5.06190362707189	4.15090848790165e-07	4.02441047552554e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.1133305331455	7.95441431621357
Merged-chr11-70683755-4	18.9659437308377	0	1.29756902967591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-117770563-6	61.176337515037	-0.0580152063534333	0.232814870119759	-0.249190295807096	0.803213585537795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1496585133788	6.04317385347765
Merged-chr13-49272463-4	28.6298658957944	0	1.27979304998367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78980998-2	2.7916149971309	0	1.43918734503554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32248482-4	11.9001969363899	1.95390296200605	1.24820773978932	1.56536680531707	0.117496927105735	0.699585803977346	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr16-13160434-4	52.7878526425387	0	1.2760193387487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38335073-4	27.3576818929764	0	1.27683920600572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72269720-4	27.519734897297	0	1.27531708199981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38239931-4	12.8600145443889	0	1.28369969177138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4677479-4	60.0536196002361	0	1.27905684537782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95590310-4	32.0981084638371	0	1.27502496000938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99485354-4	25.8964489442905	0	1.28352024006487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5125542-4	17.9213309598936	0	1.2793506677201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40821795-4	17.537742334217	0	1.2991140718841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43966015-8	74.6835375678101	0.912771570780545	0.193643122678192	4.71367925778311	2.43283506804092e-06	0.000163052349083284	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72784257274486	6.68863124520628
Merged-chr19-16140826-4	28.5728611506026	0	1.27906382323322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32130358-4	21.1311415975932	0	1.28269604811047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6256422-4	16.7398037725931	0	1.28304527983242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75731277-8	110.342763697085	0.868504270560039	0.178096139945482	4.87660356269316	1.0792803591039e-06	8.52801140822293e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.63141163282908	7.4899570622203
Merged-chr10-128780965-1	7.31929744715261	0	1.3258703018682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20842813-4	18.0962265489927	0	1.27892514506272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59526878-4	22.9330233425245	0	1.28483050660413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31385755-4	16.5511995444127	0	1.27993528140268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104005476-3	47.2216919662747	0	1.27487124336732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21953042-4	51.3922117046111	0	1.27689166595829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145257519-4	15.3052468539492	0	1.28930417443885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173427574-4	37.1546276565545	0	1.27412214979912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24553629-4	19.7721635318424	0	1.28784302342795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123924832-4	52.4647172973207	0	1.28093623940498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3747782-2	5.06590408451121	0	1.39599389737884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34555710-4	10.9014159341118	0	1.28072966387442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108844511-2	3.34299742047821	0	1.41058016250176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138323288-4	50.0728738955628	0	1.29095398085366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121885062-2	6.63421186850263	0	1.30505657233656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117120567-8	121.003696643273	0.988459201064823	0.199328667617396	4.95894149537053	7.0878306434826e-07	6.09422870038176e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98167801704805	6.9616395553199
Merged-chrX-107004774-2	3.37744654821162	0	1.35887677083199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71051292-4	20.4218491762193	0	1.27800715968879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150080514-4	21.808013191447	0	1.27692748347962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60935474-4	32.3944006402996	0	1.28081665805487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83828454-5	32.7622066071493	0	1.27731398919889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194677981-1	1.4120832288521	0	1.55035731910911	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29670229-2	5.3767064268397	0	1.40982396979762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69752857-2	3.61212321129519	0	1.38118591724489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13155503-5	34.0648163208786	0	1.27461445168235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103383735-4	37.7222008095366	0	1.27766684975757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70197844-4	20.8368905970809	0	1.28327908024773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113783845-4	18.7774591683246	0	1.28352200681099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-168653883-1	2.64206407213172	0	1.39922550614369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83136256-1	3.37021726568808	-1.27708813257704	0.934607465468472	-1.36644332488495	0.171799858157548	0.913758223275526	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00015297859992	1.9091002533888
Merged-chr13-43777545-4	26.439413091181	0	1.27780711541382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104629467-8	100.122654448141	0.938640020981459	0.187806327338848	4.99791478956896	5.79535819978545e-07	5.23794573890982e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04311371256977	6.96912806025931
Merged-chr7-68708076-1	2.86982328275907	0	1.44934694601805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166739727-2	4.36664724607475	0	1.41580512893873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10801258-4	20.1574481931191	0	1.27720710440911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36218573-1	3.56701821694402	-1.24930059397292	1.23658556190147	-1.01028237144537	0.312360024554346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.802668310139227	0
Merged-chr4-101284135-1	2.29832485588582	0	1.39249491516934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68253010-4	16.6422887358797	0	1.28288199477648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145803045-4	65.7847466370922	0	1.27981263467252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11886536-4	32.3579719485505	0	1.27733193451218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121446445-4	24.1927478621496	0	1.28117303632512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45837867-1	3.81524134243125	0	1.32428804966955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38572725-2	5.52649071326315	0	1.39307091492465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88417879-4	24.997337144103	0	1.27890363557649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37337486-4	39.1728438517968	0	1.27680154069363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101687965-4	24.173505983856	0	1.28559752294552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53196172-4	16.2890655112739	0	1.28217609024827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24936045-4	13.8852086414905	0	1.2854903594781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158136493-3	35.8278233242753	0	1.28730639547736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93009316-1	1.92786160854421	0	1.50314695884715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113378491-4	18.114930641338	0	1.28068432082869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146620969-2	6.4757501128318	-3.15266682661882	0.762636123818863	-4.13390702086337	3.56647807991415e-05	0.00139332204283802	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63759685000634	1.41695929335733
Merged-chr4-147922359-4	17.594637377691	0	1.28533340675301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80080629-4	43.9957758291109	0	1.27465336766964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130796679-4	12.6294049119392	0	1.28428359633768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30876230-4	15.3064188865798	0	1.28850385576745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8806026-4	25.8284031620583	0	1.27910033413198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84246396-4	14.133489925125	0	1.28255129900519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8888533-4	32.5881427454394	0	1.2777008824202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88828204-4	58.1903472493549	0	1.27472619533633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31239308-4	20.7760672088154	0	1.27844118147571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8687391-4	37.0648355958807	0	1.27812554044301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120716209-4	45.563729643849	0	1.27635618852541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164359899-4	12.7073047541409	0	1.29170799198794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52922531-2	2.96858771996029	0	1.45614009767404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-141004416-7	37.2512021255737	0	1.27585576545119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12436347-4	40.7330591231468	0	1.27622947308142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69439905-4	19.4050884298353	0	1.28238705281093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12294559-4	18.8485878691572	0	1.27887992037479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34057406-4	39.0915762400169	0.664425791485349	0.482005396620001	1.37846131214411	0.168060904702502	0.898258455642869	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60218100631089	2.64775197177295
Merged-chr3-38382952-2	5.69303988798419	0	1.49752076559432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83858158-4	21.2544294454087	0	1.27993084423437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35625879-4	18.2476216089809	1.93826261753487	1.23962023064041	1.56359388918131	0.117912970872244	0.701232343885845	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr7-120835096-4	20.3144377861599	0	1.28328592674714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96098767-4	16.0252586859644	-2.13822341256376	1.08721697750395	-1.96669428164443	0.0492184665426557	0.366528871363085	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15064534104528	0
Merged-chr8-106577356-4	15.2398883062534	0	1.28255881346231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44539016-2	3.24198480635591	0	1.38623038839566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75717991-2	3.91633760239053	0	1.82582060548622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143629893-1	3.07987950361668	0	1.36605179630944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136239859-4	15.7237284441875	2.46143819071664	1.16842278169855	2.10663317188871	0.0351493890398195	0.287954041399816	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr16-91717157-4	13.6787385039658	0	1.28293604434487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116459248-4	40.1232610008709	0	1.27998223490854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41460120-4	15.4912339721513	0	1.28415487914329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32496327-4	21.0391782332588	0	1.28357223468427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167800250-4	13.206086792563	0	1.2872392696155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37028875-6	37.2479995260258	0	1.27742720194485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110071263-4	15.0739955287476	0	1.27911886854325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20185266-4	20.6281093007934	1.56868094671994	0.522408542833868	3.00278578564286	0.00267520663023242	0.0406828141631761	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29905204320523	3.63709836799149
Merged-chr6-115901269-4	28.9112628027607	0	1.27744505505498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102724155-1	3.01946767315977	0	1.36245044321247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58459030-4	25.9745674980933	0	1.28075133086688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40873451-4	23.0757724885955	0	1.28404809834557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46595815-4	32.8594145155002	0	1.27467099267673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104408011-8	61.6948192099474	0.771608972617743	0.271624991925761	2.84071420360551	0.00450126320334189	0.0600162304194203	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04053907326189	5.74801646403122
Merged-chr15-6751289-1	1.81202528198921	0	1.47818505888121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9460630-4	53.9103990894712	0	1.27710419775013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88603904-4	28.2954200834011	0	1.28621163212423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37364704-4	16.612943538636	0	1.27980016354189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58374372-2	3.52178365646098	0	2.24079678620606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86407164-4	22.180189058779	0	1.28691444844577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85478369-1	4.42811860319399	0	1.39081804082632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18060027-1	1.7046186450455	0	1.4831161342727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39427485-4	18.667137367384	-1.00959438451103	0.337866990846604	-2.98814152273726	0.0028067955162715	0.0422318350923963	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86708940626176	4.89359825128636
Merged-chrUn_JH584304-22491-1	4.19231985243633	0	1.59393857302302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155050344-4	57.912579703611	0	1.28052574656166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165616831-2	7.63010193649651	0	1.36347359498025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114783910-4	29.3894076009401	0	1.30364203353275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84995277-4	23.521923929655	0	1.2809790087052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80939852-4	28.5659518892839	0	1.28563408774257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4302412-4	25.3946448316174	0	1.27629392859479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32186637-4	25.5317955724232	0	1.28404082899606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78135177-4	37.0318882303655	0	1.30128253470919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58261811-4	53.0290398780269	0	1.2782725098065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101128016-2	3.94515391538419	0	1.4040436805406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18616267-1	3.18414540628025	0	1.35207250795842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23873451-4	38.5703039760891	0	1.28017504806932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64511122-4	18.515642664272	0	1.28633364533204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44529526-4	19.9051757460673	0	1.27882466025028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95548330-4	25.3811567097532	0	1.28197257612772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117914102-4	13.2929824434708	0	1.28648365943827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26799071-4	31.9526054636554	0	1.27786956024723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135909680-4	24.4149990901137	0	1.28144894360821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38535500-4	34.3967867296546	0	1.27863630557769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96130318-4	24.2188730632001	0	1.27972452752878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180302900-4	45.8611984278988	0	1.28196551277101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-36038963-4	24.3260752518759	0	1.28686264890176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102456635-8	58.2027353445917	0.479426803102135	0.2010599631505	2.38449662274766	0.0171025049864339	0.165813099531678	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91169916293674	6.31533654280702
Merged-chr6-137565550-1	1.75199660568894	0	1.57508836810438	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78236996-4	32.6438987773301	0	1.27579075283551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69181438-4	55.9904594819392	0	1.27972183208693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70824659-4	22.0904048608144	0	1.27934704326772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63031591-4	14.9790715653924	0	1.28072352034877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44089491-4	32.608276164279	0	1.27927117818316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36278976-4	33.6243552071594	0	1.27598050241926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141558731-4	13.5722029152079	0	1.29525463174018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125324677-4	17.604849456636	0	1.28265713714205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39527464-4	27.558937073321	0	1.27787970249113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78808441-2	3.03667556564425	0	1.44485422521138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46693469-1	9.55987246340844	-3.61580952727809	1.05153092037767	-3.43861455446259	0.000584699095682199	0.0124252836118533	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10329476946888	0.306240821987646
Merged-chrX-100508342-4	22.9081594140989	0	1.28049369431635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116679795-4	35.799479673004	0	1.2820184084412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30658605-4	28.9297550714407	0	1.28714829153868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23134649-1	5.5002065137165	0	1.299326162813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72262155-4	32.3621781251744	0	1.2745421296343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108760721-4	14.4364145723368	0	1.28341175358098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126607255-2	4.54544375634213	0	1.42645471786014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117198300-4	62.4075155488611	0	1.2784347642849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70791804-4	21.9337437338346	0	1.2865151536619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167761780-4	45.9568160058546	0	1.27624524810989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115328761-4	16.0146710414551	0	1.27817224443114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79287664-4	17.5017802060072	0	1.28347365426729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-120028369-2	7.36688633646805	0	1.30079593635367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10279832-4	53.6885237959229	0	1.27767627162932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64279737-4	33.9114661680648	0	1.27792765661578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-61065993-1	3.03753178695261	0	1.43339689268629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132019421-4	15.0439943141994	0	1.28231437771871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112894731-2	5.35609383776073	0	1.31772948029145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67890068-10	77.8715327253705	-0.668144652811257	0.208581175943892	-3.20328356472104	0.00135870125580192	0.0240351088959481	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70524861596973	6.0096745449027
Merged-chr16-30395338-4	14.0496680463699	0	1.28130648100488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13298979-4	15.4605046420604	0	1.27964573600796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25711961-4	33.932379030594	0	1.2854976056205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115692206-4	20.8938723835114	0	1.27906962497905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141467689-1	3.26376427236198	-3.33973776615488	1.16729651321035	-2.86108775992981	0.0042219016617285	0.0571307488066495	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16764039545911	0
Merged-chr8-76991844-1	2.04607431378352	0	1.53900134711743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112760841-4	13.3687766039935	0	1.29925180571467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52800462-8	112.830242649613	0.00584390829131974	0.155619975014618	0.0375524304689728	0.970044536131401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.00570228315464	7.0124438161178
Merged-chr2-3668893-4	33.7813872285933	0	1.27995697551521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53825103-4	25.6141868088505	0	1.27812746755894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167352729-4	28.919113438657	0	1.28080773841254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130796134-4	16.6856110907797	0	1.28558746685741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75011195-4	17.9082058708259	0	1.27958481659155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62846970-5	28.8898399274851	-0.406555169275469	0.464084671031246	-0.876036625756374	0.381010123096545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83651758965106	2.91991443973346
Merged-chr2-68793755-4	14.3633264698596	0	1.30835891723339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97825188-4	33.4263436171915	0	1.28374216819923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41006961-8	89.1858320004209	-0.558315980164959	0.172772816996908	-3.2315036003317	0.00123140772619159	0.0222963616724067	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.28303313697432	6.7258818476928
Merged-chr18-37880356-4	16.5668189360442	0	1.28393760783519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72270160-1	2.53169172197402	0	1.36783357033504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120353828-4	43.9353806758872	0	1.28159280548004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19933619-4	29.1818233351958	0	1.28089529980321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113378069-4	36.0099497315445	0	1.27621404906586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63424268-4	13.6629780608666	0	1.29243727944617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120570445-4	34.5577368939617	0	1.27761515115983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61965713-4	21.5803955922996	0	1.27776865144497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44380682-4	56.5007293860734	0	1.27708832965298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76228150-4	15.8360931018612	0	1.29422376377962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6746247-4	38.0439426959172	0	1.27760638775034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17498959-1	2.80457364368717	0	1.6869965480549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113722192-4	15.5895303242293	0	1.27672194603863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121488845-8	130.338301085826	0.521921977879541	0.178789501356271	2.9191981291984	0.00350933099544895	0.0497334077702466	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.92133084830258	7.40667577343466
Merged-chr15-95804425-4	25.8836808283723	0	1.27508205731424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91984728-4	34.4890245469286	0	1.27619495200478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83273886-8	80.9230616039336	-0.162811964648662	0.21858717119983	-0.744837694522433	0.456369844358998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78514618581286	5.61986129968572
Merged-chr7-30216976-8	53.511368301175	0.14684487254394	0.215546249425369	0.681268511678669	0.495701603838068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85343484432476	5.92480806542925
Merged-chr10-60745091-4	9.98257424969773	0	1.30059553004425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87743480-4	15.5856791960669	0	1.28909161028111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111732650-4	13.005227395187	0	1.28123502857289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59815611-4	22.3078741360381	1.64432303800242	0.876732102645055	1.87551366379944	0.060722091513049	0.427442183778057	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.68348383313306	1.35032549026822
Merged-chr5-151333257-4	28.4014792265215	0	1.27486315409572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99942709-4	17.9675313371875	0	1.2827069125499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44981817-4	34.0408959344035	0	1.28218212999745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100839403-4	22.9748929373501	0	1.27652815360633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59554373-4	20.8546170204176	0	1.29333103844243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44355788-1	1.61765034965124	0	2.43325017751999	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60288805-4	17.3923801566081	0	1.27802054004076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144319600-4	37.3214640872389	0	1.2768642391724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113601301-4	54.0591441863551	0	1.28281292217516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32904754-1	2.23455693164437	0	1.45625080625692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-146968173-4	27.53118670606	0	1.28243299259371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72407360-4	19.8240000739442	0	1.2840970398194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170221142-3	9.9882739392476	0	1.28491758965262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37439475-1	4.43825083346263	1.2873576156092	1.37081498689064	0.939118428030368	0.347669943841048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr4-53384941-4	20.8466996573714	0	1.28771261838388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97337110-2	10.9788663261263	0	1.29822457707291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23885106-2	37.8911403911659	0	1.28431715535066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110797904-1	3.65235509962569	0	1.42389523202727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68739193-4	19.0990793493535	0	1.27659892560985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117910645-8	66.8818249677998	0.211837588702553	0.20345624018881	1.04119484615446	0.297785127191628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17523201341872	6.36406365346255
Merged-chr10-60934488-4	45.0596947995053	0	1.27528971106282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90197889-2	17.4434630954616	0	1.27770429357331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3369524-4	9.29555420003519	0	1.30085501644163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-47391645-4	16.8367466298926	0	1.27934243815549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60350946-4	16.506394183652	0	1.28182824786988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-4600-1	1.84414072922023	0	2.09888016365094	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120453262-4	19.6094368496648	0	1.29042409629925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144417790-1	2.4547565145939	0	1.50691906010853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122587461-2	2.93937534020036	0	1.41264839270499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23657962-4	26.2201530232937	0	1.27596200925845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156257365-4	22.787884450029	0.429991839625839	0.600887591405341	0.715594473535699	0.474241787052345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45891694371266	2.94640134381309
Merged-chr12-100026892-4	18.9645655955244	0	1.280232318975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31111666-4	32.0919027963499	0	1.29272730935918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13162321-4	16.768047987614	0	1.2899229191669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50836154-2	4.73921804712398	0	1.3409535876462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38441769-1	5.60345403248785	-1.63055781887399	0.972333923239359	-1.67695251590291	0.0935517675767873	0.589778561945525	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44398950010446	0.73596151290311
Merged-chr4-59083617-4	12.3951668415786	0	1.28885444075596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127599635-4	28.1848734116829	0	1.27814817773793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22302542-4	25.47249485751	0	1.27701240315547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53475758-1	2.48916152984098	0	1.39922944322856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3169122-1	4.2672674550987	0	1.39589020183472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106027805-1	3.23964878634036	0	1.40962900659893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49500953-4	11.8389511268176	0	1.28577015173291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160152307-4	39.0014100112249	0	1.2742185325263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-89177751-4	44.5606963475173	0	1.27586792764857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55457221-2	2.95016210427636	0	1.50002903472665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102982990-4	20.4728485499216	0	1.2933946884613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136673524-4	17.4010888125313	0	1.28287292113982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34254882-4	38.7141735138004	0	1.27963337030064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9429827-1	2.84231904985671	-3.78140227731046	1.14230008642523	-3.31034053332182	0.000931825307446334	0.0180533835242977	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17205578846774	0.306240821987646
Merged-chr5-122318322-4	15.2292167040849	0	1.28823830621872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55776517-4	40.6684721114495	0	1.30624420766327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-59557268-1	3.3554483324218	0	1.32308783979835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90227679-4	16.1519044108648	0	1.2820966947779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34515900-4	68.7330165642395	0	1.27619871069563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91355393-4	60.8104336043872	0	1.27924596004847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176826327-8	91.7089676660122	-0.529045115272451	0.198657329725201	-2.66310392878163	0.00774234974334828	0.0906037941133303	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88389463586888	6.33262235929281
Merged-chr1-77832391-4	48.6485684296573	0	1.27688183144499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108342475-4	55.3240377879657	0	1.27888877597382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8762933-8	108.849437758333	-0.394506935160002	0.196607670363992	-2.00656940001185	0.0447955322718504	0.342764502556948	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.99282658027847	6.58369587785748
Merged-chr11-101979586-4	15.0736585019473	0	1.28500703949633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126494592-4	40.1268137859654	0	1.27727861788926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76224832-4	34.0464467484444	0	1.28464434083932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7714620-4	25.962201130782	0	1.28290162203158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101827798-2	4.41328692444334	-1.21335473674482	1.24474896579167	-0.974778666293669	0.329670061614032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	0
Merged-chr1-131038258-4	27.2908272955402	0	1.29131029340868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68183946-4	21.2354829004263	0	1.28537687467802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124649208-4	14.2288412591943	0	1.28336460834884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23754471-4	22.1122677261495	0	1.2988319318998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50936769-5	13.4534579265994	0	1.2829915536149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118682814-1	1.88555451669813	0	1.38494325398855	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24792576-4	28.287610571331	0	1.276462529734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89570685-4	25.7778741905004	0	1.28312078369935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66059009-2	6.25188040760727	0	1.46372095026193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99199496-2	3.35916339734152	0	1.56888403897863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110003193-4	26.2321273038608	0	1.27530001643379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4312253-1	3.40947024678069	0	1.39971391226267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158156663-4	11.9286121632549	0	1.28901014015179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46395536-4	20.3500142966805	0	1.2767936617257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12089778-4	11.0237257447886	0	1.2824830509498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45048839-4	22.0207732995267	0	1.27759929525608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58469683-2	10.7237402994061	0	1.38158084555755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21152270-2	4.63942777148631	0	1.34039566616125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9644435-4	19.8888648337643	0	1.2766177582269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166345784-4	29.8278990918212	0	1.2752822068913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6455303-2	6.26487182832414	0	1.33441681062346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46366001-4	16.9441052194178	0	1.28199734266475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23135068-4	41.0148020444531	0	1.28143896202645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155070642-4	22.2045764578093	0	1.27941414142042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25010502-1	5.24675055050766	-1.54355865101369	0.926166103667434	-1.6666110375898	0.0955917727015086	0.599360965165302	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10145021753398	0.918668513615376
Merged-chr11-82567525-4	14.8742940029647	0	1.28199739430591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46745900-4	20.0982038118449	0	1.28771106657683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84748338-4	25.6260300701913	0	1.27943424568579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40576502-4	22.4059333142219	0	1.27844172855457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64754383-7	72.7286646414317	0	1.27476028321581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131976109-4	15.5083645252386	1.92251044615853	0.804054851892747	2.391019022686	0.0168016823188827	0.16355172542972	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.89544522622072	1.52572753666912
Merged-chr9-56103811-2	4.93932297435585	0	1.358360839562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76203137-4	22.8110947764274	0	1.28649432381089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5211064-4	20.3043220717199	0	1.27992914272687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-5860675-4	52.3970887764821	0	1.32542309695812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21813431-4	14.0389272102527	0	1.28034912223601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180888837-4	28.3706333954866	0	1.28199263693421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10436439-4	26.1238489825471	0	1.27708880022419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90504972-4	69.6463365466966	0	1.27901029305588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122219214-4	26.0156957547535	0	1.29291513355438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-18956854-1	2.47808915777277	0	1.43094144068735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6383653-4	76.3151150981086	0	1.27926661546742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53266537-4	63.0447729489614	0	1.2794106066961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122054636-4	46.0034015366128	0	1.2780321905498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49792675-4	27.9489547344187	0	1.28347302735715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33751747-4	39.351185356022	0	1.27413090987645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146568014-2	12.5230471237258	0	1.36900170064156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5824852-4	13.2890944504969	0	1.29221402700569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96628532-2	7.64996529795679	0	1.63868236091893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79132345-4	42.3276105742143	0	1.28136865900818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110372788-4	15.4253971275664	0	1.27963267636444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105169121-1	3.09445990708217	0	1.39631622048558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29419640-4	19.3409774214983	0	1.28095080222536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44715429-2	3.49595078435926	0	1.51549085203754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4839804-4	28.3250633608156	0	1.28785070640404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32856997-4	32.3467716593263	0	1.28364198089608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165672679-4	38.6780106118209	0	1.27993080899467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10946185-4	25.6644504763523	0	1.27772162342778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128310612-2	6.63826280163342	0	1.34826260007488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34838500-4	16.0407122490609	0	1.28403855829983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34063878-4	30.2111187482769	0	1.28111656700005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50299233-4	11.3027640265468	0	1.28627058829447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24640493-4	13.9410956911639	0	1.28593538669545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30530909-2	3.80127924006376	0	1.36225033341161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99449840-4	11.4763062055281	0	1.29341912621509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27665797-4	32.4644713056345	0	1.2825279253995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31410189-4	21.2351420875082	0	1.27684076471735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100089471-3	41.8821728512557	0	1.28071715567617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44977329-2	7.35625851521078	0	1.36231488321995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8667333-4	34.6769228696048	0	1.28004947839521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62372602-2	4.79786976732116	0	1.43341341286904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66048974-1	2.0388084164705	0	1.45673108028968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36135949-3	10.3704307542892	0	1.30709787007137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121574606-4	13.166403723066	0	1.28638569856368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49930344-4	10.345917120704	0	1.28471841685973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66475877-4	33.2874753672362	0	1.28497726664797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127323798-2	3.95632669908136	0	1.39388230617781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4154466-1	2.35566233480601	0	1.47145529656381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32224538-4	16.1764513098445	0	1.30778221953617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98944098-2	8.84489743485276	0	1.38034306700287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96302842-4	28.5680478290765	0	1.28347196903113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113615181-4	29.2008095886793	0	1.2850523020423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122575903-4	19.2747837536622	0	1.28856406045665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121546165-4	19.9474771738736	0	1.2868735979465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109773314-2	6.678116250849	0	1.34745589109965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86772528-4	43.1668698704339	0	1.27330567177368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54117991-4	59.2452983685114	0	1.27464818169254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141550567-2	13.81690454328	0	1.29908126439542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80313082-4	32.1167754412169	0	1.27769008952019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120244882-2	5.12806874645518	0	1.30842444137726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53118597-2	3.44152191506705	0	1.45740092208722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91736422-4	26.1992723206314	0	1.27952672310429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19691957-4	57.6390937142474	0	1.27888790740323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28929359-2	9.217450736028	0	1.6996673384578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31078600-4	26.5081468487021	0	1.27774159536112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170343332-4	18.2289194638194	0	1.28509053919439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28444809-4	30.9211036344272	0	1.27951804430083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54719141-4	14.8748641137274	0	1.2791975828812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36598476-4	18.8051741638965	0	1.27803557659102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58916733-4	30.6469755207028	0	1.285712863323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78589079-4	64.0550879081305	0	1.27935941563622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114805225-4	61.9882839817227	0	1.27893195934967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111980468-8	84.845628475876	0.298555082820355	0.184381172013299	1.61922760095494	0.105398301442166	0.645972369727985	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45094612882882	6.72010417378124
Merged-chr12-11272740-1	1.57921802238845	1.25291522713561	1.48921108490639	0.841328163505018	0.400164117154939	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr15-6391378-1	2.78683208379439	0	1.33077962266395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17468590-1	1.36876255182752	0	1.81868914321264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123244387-4	21.4906012222625	0	1.28329920940899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3699469-4	20.5144253275677	0	1.27981850705179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170136590-4	13.5289946623442	0	1.29078699108657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102445621-4	50.8082594616833	0	1.2772027517087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120155627-4	22.8342254542589	0	1.27816992794154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37620665-3	11.9746157869228	0	1.29879943757316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170147841-4	19.5134451673644	0.787790750462168	0.580018069603514	1.35821760001491	0.174394647509885	0.92357505763684	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82309339588691	2.47044523122567
Merged-chr6-29803170-1	3.00423820363531	0	1.42089607335401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129209997-2	5.2260327542563	0	1.34169242269744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44383151-4	26.9512010853494	0	1.27610735454068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98918428-4	32.4597829937039	0	1.27740373696952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43925833-4	34.1647382250717	0	1.28453446309533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134548347-8	77.3448058072391	0.169692211302439	0.236743519973948	0.716776583034302	0.473511962916279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42389069075353	5.61619137692536
Merged-chr1-60627611-4	19.9352231452799	0	1.28015153852156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52000271-4	25.4322070133576	0	1.28528411586027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56507293-4	20.4700165235731	0	1.28226735043418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130800741-4	28.67905140142	0	1.2769083356688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130900284-4	22.8826251711127	0	1.30859304071175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61295022-4	20.3825302430655	0	1.27900887720861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113433680-4	25.7097496808459	0	1.27901195866137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101362918-4	54.5442299483987	0	1.28116939252238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102887661-4	16.1504589270089	0	1.29271594453389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21717386-4	11.3833328296136	0	1.29327066968481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-101097783-2	4.15204405179397	0	1.38925784695715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139015214-4	43.7304530874128	0	1.28025227488567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5935957-1	3.93175170901409	0	1.32738273677684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191193807-4	32.6327802605791	0	1.28921528166623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30638321-4	29.8116326663054	0	1.27889439900897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6299668-4	53.3205145613636	0	1.28579505308928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123931973-6	61.6647298668094	0	1.27889183212973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136831891-8	55.3538007116849	-0.0834870986252984	0.252580202832457	-0.330536984645141	0.74099425176175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10392676726605	6.02358808673834
Merged-chr1-134093604-1	8.55232154671099	0	1.29822891040935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11391061-2	3.81323947501447	0	1.47517771485289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34012141-4	25.0212931933798	0	1.28363861560032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12926606-1	2.62134903953205	0	1.35647560624487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11939830-1	4.1994575961049	0	1.37773649130196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66437983-4	32.79448502663	0	1.28037669824915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47459055-4	21.9518915917053	2.45060969902583	1.15378375685087	2.12397659827913	0.0336721004606339	0.279585397293594	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-99467578-8	20.9042567820927	0	1.28161953324388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65294435-4	12.8658147343338	0	1.28690298966781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5020937-1	2.46522178576807	0	1.43745624500337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43614379-4	14.7396714375013	0	1.29477791703196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98871356-4	24.5424743799442	0	1.27592600926325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17764537-4	24.930235983905	0	1.27977030007871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21804508-4	16.0738651447247	0	1.29195048575598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45697603-4	15.7955146190816	0	1.28349668672666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115692981-4	40.2668644310597	0	1.27644343123657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191732868-1	3.71094055541242	0	1.39486366166475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34872037-4	22.2987791948169	0	1.27963493279758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64928104-4	21.7246355474397	0	1.27683563575783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4853738-1	1.35730509334005	0	1.62065042254415	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59784467-4	27.9157746963284	0	1.27823211581723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114965633-8	173.297541728445	0.152070652057579	0.158115022472247	0.961772320427496	0.336163984984687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.98311997032649	8.13627520081627
Merged-chr18-30507198-4	23.1659067007129	0	1.28561639717666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119001168-3	38.1026515584265	0	1.27764619893033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62553693-4	38.6556424977087	0	1.27455616133929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122635538-8	72.7982804424078	-0.258423170753217	0.209337907714148	-1.23447861677349	0.217024609946035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.29282388814847	5.97933405563844
Merged-chr7-118382152-4	11.1823639311094	0	1.28192562208191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39447987-4	22.3606951561977	0	1.28767440011841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101694688-4	20.9358061005991	0	1.28319915093158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45912056-4	16.5175307295525	2.45099906364814	1.1712413734878	2.09265068595502	0.0363803484088894	0.294805338185427	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr14-68611000-2	4.79033152112476	0	1.37081449026808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36342092-4	11.2116441737764	0	1.29619880413577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115612325-4	30.8771570041715	0	1.27782752810791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140617903-4	67.702254315822	0	1.27942599550229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12412285-4	76.8186689541379	0	1.28199837968379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-49419-1	4.85876814880879	0	2.43325208139759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51454583-4	20.131297387288	0	1.2859277217367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46606118-1	2.32082151591606	0	1.45529606449954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99398561-1	2.82072583093252	2.94275257023655	1.17564162497189	2.50310341836265	0.0123109564832278	0.129942135737846	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.5668077711644
Merged-chr12-111071943-4	27.9599793180118	0	1.2743795608201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50690276-4	24.7607437699415	0	1.2835872518359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118554888-1	2.9256142991992	0	1.39509841227821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117991929-4	43.4558118080033	0	1.27631933412184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104992878-4	19.8733586747674	0	1.28130063254015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36675517-4	10.5692884586443	0	1.28650852791189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108749209-1	3.88208745214306	1.29611265357396	1.32407419452143	0.978882194771895	0.327638190746488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr5-29993797-4	14.1536662673713	0	1.28894392667075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38950043-4	19.5337634699256	0	1.28502865723814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55289112-2	6.06428181593079	0	1.34354907806015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43511752-8	103.030172729625	-0.0859062835906577	0.170750537785027	-0.503109885948427	0.614887016550841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.3996359401002	7.28576222081402
Merged-chr9-40622283-1	4.97202318274542	-0.237455858945271	0.732538752021789	-0.324154672076937	0.745820937209986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98422993768873	3.45893158977142
Merged-chr18-77055021-2	9.20631259258829	0	1.35858052604426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127850310-4	37.1811617001179	0	1.28379158418266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143853632-2	4.27131779591994	0	1.31956108893281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19851566-2	4.01086156552825	0	1.37362196463916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19628731-4	64.1157315668503	0	1.28045997679872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73162110-4	14.325985520026	0	1.2816321833248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46987806-1	2.38296703989611	0	1.39057880352781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16252900-4	17.4529489480233	0	1.27839601313995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143278500-1	1.56168916259173	0	1.67919112519483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22864877-4	15.5406772183474	0	1.28661327460932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55859679-4	16.5775446566333	0	1.28991961853817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107339603-4	16.4712083056463	0	1.28038460049008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63408921-4	19.6191403786528	0	1.28138525357963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128747541-4	22.2098720984659	0.967773452740058	0.398401423321542	2.42914155444416	0.0151346220122448	0.150691301236043	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49159806592358	5.48059845332638
Merged-chr12-85051373-1	2.24485820713537	0	1.47731854259647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13463278-4	18.6702255448274	0	1.28529360620415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21738603-2	6.56703777227784	0	1.34605022955895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25052116-4	22.0795338287266	0	1.27561632367652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16169056-4	16.1679942735368	0	1.28954245292103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95662093-4	15.2137495623452	0	1.28917744323738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128680784-4	29.9156058863707	0	1.28442867610942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60714935-4	18.3027523463387	0	1.27653233428529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37259255-4	14.785573109923	0	1.28614923549835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137871631-8	180.881804897477	0.125285444210614	0.113130055626889	1.10744614697101	0.268101083551421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.07210874506457	8.20804246665375
Merged-chr3-146142690-2	4.2426364751364	0	1.36607774034628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74792521-2	9.77883666435059	0	1.29954175435376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159145402-4	14.0415620589295	0	1.28498593254401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116047529-2	4.7782478969828	0	1.3465356497646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139702422-4	28.6155990314623	0	1.28026665721642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21913508-4	20.3182911557229	0	1.29673895365329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10817611-2	4.80208293948406	0	1.35912521577264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59759820-4	28.6132308423229	0	1.28236606932434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66729656-4	14.2009790113057	0	1.29338808553689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83309086-4	47.249294923156	0	1.27770272285716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-59189780-3	8.50229309311784	0	1.30321182978386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21819825-2	5.69293941541993	0	1.38823546195152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99183473-4	52.8825780236146	0	1.27778929048803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6951604-4	34.5265718976326	0	1.27822697526564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120516757-5	80.9063782067315	0	1.27643744758716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41179251-8	78.5713334981689	-0.612066997701283	0.207144142414898	-2.95478786204511	0.00312884110824743	0.045821885042478	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.19830504857387	6.56697859910734
Merged-chr1-151608015-1	1.57338329563255	0	1.56769953256759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12461380-1	2.29387550290688	0	1.41282780964919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103329887-1	2.67646441932646	0	1.43551582269932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58927778-1	1.90413335913712	0	1.46304473350709	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6565332-4	37.1608289800953	0	1.27545859347753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87025584-4	15.8355989590436	0	1.30690604298029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46842848-4	22.7633730391169	0	1.27722427390025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107612907-8	79.6436612792884	-0.0334126423108416	0.255940306662081	-0.130548574965007	0.896132425671379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66298447461997	5.6204778683693
Merged-chr10-98958947-4	16.7131410327379	0	1.2875920380043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74397492-4	72.4250653587077	0	1.28055122776266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86894618-4	65.2415034784315	0	1.27928698714432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45019596-4	46.8699253403838	0	1.2725828367946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14808245-2	4.24051550734164	0	1.40794486644817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16798469-4	20.4032640805271	0	1.28541452817651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21818231-4	15.0628895204051	0	1.28862274059799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3157958-3	30.0029141245933	2.46407853537982	1.16931635938183	2.10728133204472	0.0350932005405349	0.287548624767623	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr19-56703872-4	38.384122853041	0	1.28101164152563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-90237341-1	5.06223296947777	1.70442334480317	1.10667092388897	1.5401356519006	0.1235272910382	0.724077355595819	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02490887495075	1.62042974503458
Merged-chr2-118008209-4	57.4241163144011	4.77985583921056	0.940396481078345	5.0828091505931	3.718933235798e-07	3.68766936610707e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.93460027930195
Merged-chr7-139377589-4	26.0288986254735	0	1.27728622141439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148336368-4	11.9946182323461	-1.72960597540904	1.14609266689773	-1.50913274760826	0.131264862348798	0.755339353209276	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.781596303653021	0
Merged-chr2-131530743-4	10.2980838956607	0	1.28920967740605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82783090-4	12.6897497606255	0	1.29015271613111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144698148-4	31.021415195984	0	1.27725983291565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21246061-4	16.5848924853435	0	1.27969114924921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44691753-4	38.4352232709099	0	1.27704894799024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115480913-4	17.8972976279884	0	1.27981452195555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129398454-4	13.2431112381565	0	1.28609587737455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47550308-1	4.74879289485367	-3.78475269818108	1.15173596687337	-3.28612877173193	0.00101574563015558	0.0192279588494052	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88204365478572	0.423054662900563
Merged-chr5-74126685-4	31.3562842096121	-0.772778171356784	1.02317319298974	-0.755276014511974	0.450083387164101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00194012663835	0.609949614787909
Merged-chr1-58727186-4	30.7733276998708	0	1.29224536572931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108369396-4	28.9290404805615	0	1.27419358451491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-20894345-4	20.9497351626223	0	1.29485239263471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114752977-4	82.0079505232543	0	1.28132215177517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31938973-4	17.8083814590717	0	1.27685854087522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72933153-4	38.0212548008066	0	1.27550040713833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104157754-2	11.2393628908574	-3.68050466015687	0.563477697960283	-6.53176633872082	6.49985076823387e-11	2.43238098734348e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74021928273595	1.54028618764495
Merged-chr14-14643748-2	4.34974028976722	0	1.33935552389935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97934039-4	26.2976577576402	0	1.28459847831699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44420018-4	12.0850343195624	0	1.29051066053654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80237051-4	13.4734954787221	0	1.29276189431564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82802502-8	59.1166019965312	0.341230923814273	0.242637730052103	1.40633908725159	0.159623458609825	0.866629654895119	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26572031491065	5.61575094626401
Merged-chr17-13684009-8	100.870734279699	0.233411036757189	0.178840773434587	1.30513323262137	0.191847484377443	0.988589104882748	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.50619205806508	6.74890924838291
Merged-chr2-145824944-4	20.1688922692145	0	1.27648915664043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29624939-4	24.9507494380996	0	1.28676887738797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92465701-4	35.4468887043717	0	1.28139165004691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44692138-2	8.4869564773303	0	1.30575318317789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83640359-4	31.244478397812	0	1.27840251708217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40845682-4	20.8267771872189	0	1.29970493060599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103059818-4	18.3595384034099	0	1.29527407601468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117328740-4	15.4083877910352	0	1.29337700717702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134693340-4	13.3073574514917	0	1.28245056792967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116137017-4	19.2994520987601	1.32022709259221	1.28137897306287	1.03031743172473	0.302861018746702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr10-75330675-1	2.07303522180634	0	2.08937424400871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65975550-4	22.3985658691654	0	1.28029110952191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19417843-4	30.6937239450382	0	1.30910613182162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43973682-4	59.9852409762824	0	1.27945125256683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77897417-3	9.78869647342398	0	1.30209452347002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3871044-4	19.2189271944081	0	1.28586418946817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155062206-3	9.95157209064236	0	1.29588442840635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73435061-4	47.1180550287063	0	1.2750501470632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85947371-4	31.5692658618596	0	1.27604500030805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50109027-2	12.5129925727391	1.73520718930786	1.13306669367281	1.53142546594783	0.125664274248238	0.733380161206159	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.989878296978726
Merged-chr11-87423051-4	27.3437775381682	0	1.28739102262615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62538968-2	6.06639429844524	0	1.45480447273967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84956546-4	28.5615482719418	0	1.2804986988127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-48567-1	4.4643506419856	0	2.43325219329826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80158508-4	33.4261236127212	0	1.28190900565915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34172313-1	2.2352768107526	0	1.48488687027672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81704937-4	16.2043023984968	0	1.2904014010609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108999297-4	17.5712911720866	0	1.27731356051073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65883602-4	13.0273872356222	0	1.28915526669925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55726406-4	15.6891947605723	0	1.2806246463476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90279212-4	13.3287194096553	0	1.29075642083057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-19973650-4	14.5017715247544	0	1.28502629927476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70688444-2	3.79232240050034	0	1.53038117709865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163845632-4	16.7418219527104	0	1.29964328031997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48324503-4	44.9624903714015	0	1.27852416556765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80390885-6	28.3206506809722	0.288259310465718	0.410924530522949	0.701489663074811	0.482997483357431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1182547325041	3.49972584710748
Merged-chr4-33290301-4	28.1443933662248	0	1.28048674951022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122572654-8	134.194089780416	0.404229642960942	0.162799310847408	2.48299357569042	0.0130283437227919	0.13524227941375	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.97879269203567	7.38977590293307
Merged-chr18-5134373-4	52.4460155050478	0	1.27868684690228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54382832-8	90.3211921714494	0.44878576730578	0.186753946248209	2.40308585880864	0.0162573698949453	0.159440806416794	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.62281392536502	7.06313770365153
Merged-chr9-118669873-8	140.110215912375	-0.110636514922545	0.192418864499656	-0.57497748575864	0.565306523697638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.85062267251435	6.72901301398436
Merged-chr14-61861534-4	31.7729037036284	0	1.27794884989227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45231783-4	24.9109978524618	0	1.29905449536413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72366739-4	32.4505531653498	0	1.27678950226534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160318454-4	12.9203067269087	0	1.28332240180383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53402934-4	49.4351943317028	0	1.27599670707509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10845626-4	28.5555424145265	0	1.28133431117623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79764937-1	3.07443279244282	-2.40505153264457	1.3594517113883	-1.76913347675181	0.0768716024274084	0.510389324550033	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51418390646525	0.609949614787909
Merged-chr17-44783333-4	16.8954379008441	0	1.27943272216801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128707581-4	15.4384007099196	0	1.28642438256342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65649287-1	2.05387263615425	0	1.60912634578657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72753007-4	21.11520209748	0	1.27913544352531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124201798-2	27.3799403918692	-5.28682340498054	0.809072407521075	-6.53442554193499	6.38541517012057e-11	2.43238098734348e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89354912746578	0.581381506691384
Merged-chr9-84578016-1	1.9982486305968	0	1.55963724818964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55789100-4	22.5922277943222	0	1.28705668666406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26663116-4	22.2057600192791	0	1.28016019759351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111230189-1	1.768690729267	0	1.64482412106525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132686671-4	15.8348699542804	0	1.27733033057716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3541672-4	20.6059327361412	0	1.28413609010002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129380384-8	63.4514726089227	0.860226100223519	0.175689820855954	4.89627740544405	9.76691658438788e-07	7.8793695200421e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.73309936798996	6.58244071912464
Merged-chr6-15729024-4	22.2617944842771	0	1.27501802108745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51395934-4	15.8965188022788	0	1.29241927639415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106136328-8	61.4327310108972	0.688749494717484	0.240327232479315	2.86588202099305	0.00415849191692292	0.0566008774845334	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16037570507659	5.82976733429649
Merged-chrX-85719481-4	17.0071434780614	0	1.28907736472796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-147927866-4	20.8067171386402	0	1.27996226180329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15842056-4	10.7767678218163	0	1.28457567688357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123985071-1	4.32719048897818	0	1.34297795379104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100442653-4	22.4206974830535	0	1.27847840182995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13645131-4	23.1107606826781	4.28925401599106	0.894349813438309	4.79594667717446	1.61908349161064e-06	0.00011901083221911	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	3.55641822173189
Merged-chr17-53587282-4	29.8170808894683	0	1.28271306789002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84573848-4	21.2568850911841	0	1.28144044749196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134522046-4	22.7544671157292	0	1.27962851445868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55443322-4	15.9291286390997	0	1.28148760512179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21132104-4	37.8495432443727	0	1.27651834240549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21924181-4	36.9360030536043	0	1.2744562870275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138960079-2	3.48305554860605	0	1.47834975573575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27195349-4	19.3112369162307	0	1.27856398065955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39602679-4	23.3646822014994	0	1.28703233890949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3664323-4	29.4189372702546	0	1.27797658120462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60706460-4	43.4088991288304	0	1.27711020742828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75168720-4	11.6605384990039	0	1.29034312630339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20819333-4	10.8415078705497	0	1.29821728158731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111620050-2	5.18856746187204	0	1.34925637924966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10457227-8	126.661075389166	0.481926247702466	0.172498843493999	2.79379407966426	0.00520936389523522	0.067274919584593	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38567505396986	6.90480615540139
Merged-chr1-58734219-4	13.5168405640684	0	1.28108395293407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37147350-4	22.7299588341798	0	1.28426197203006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105047789-4	15.1768991881	0	1.27922554753015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72104206-4	19.0369186741954	0	1.28461338271904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7858066-2	3.80636371209221	0	1.49976985833689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39611073-4	23.6232789376722	0	1.27752177856387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140495910-1	1.70198549227591	0	1.46236990194906	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58021295-1	6.86648291827899	-4.32222743642792	1.15774641649209	-3.73331100391055	0.000188979010058507	0.00522707611086646	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03563444563408	0
Merged-chr6-100416225-4	17.6543355577193	0	1.29228847641323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23820749-2	3.4904805530445	0	1.36784940036335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34031186-2	13.2818241619719	0	1.28349686775983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120620545-4	19.8323325291217	0	1.2835252414515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6341643-4	18.3500830733373	0	1.2786752649338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95528933-4	28.4147051402161	0	1.27868505684496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20788245-8	95.1911434477468	-0.86307268452441	0.188511750340232	-4.57834953506456	4.68659095699178e-06	0.000274663652623843	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.41577232430761	5.56076634094673
Merged-chr2-92008441-8	79.9821302630949	-0.30424887274452	0.21672234282317	-1.40386481975587	0.160359107398759	0.869395688382916	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96054558514125	5.63845700684039
Merged-chr8-86878731-4	20.4472379810896	0	1.29461098282225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55405643-4	19.1715351442002	0	1.28686950006824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126758050-4	34.065347981751	0	1.27963581249997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119334493-4	18.8033230550928	0	1.27889585870511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27236945-4	24.7826178241804	0	1.27631427859066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-10599459-1	2.01291158012065	0	1.51766228234495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129515211-8	66.0650178060272	-0.111673829488196	0.208128177345025	-0.536562761048297	0.591569672751578	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75167311114193	5.63860318324242
Merged-chr13-51239118-1	2.40881948991871	0	1.36086389035395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8944073-4	15.3123133183081	0	1.28477204795317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85482031-4	15.6925235354564	0	1.27965891966159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71434251-1	2.35605023835875	0	1.46792573713658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6157350-4	28.7848228314132	0	1.2817428518032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13557324-4	15.1952819268946	0	1.27876578691105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125561479-8	57.3286006127962	-0.289942115674854	0.208093151968155	-1.39332848261737	0.163520481375975	0.880834999257641	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1322105408623	5.83424721650926
Merged-chr6-33515494-4	15.9640343969966	0	1.28319166589614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152479064-6	28.2623760006422	0	1.27719457907325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40276088-4	18.8631874532367	0	1.28183678453721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84243626-1	5.5644773084785	0	1.31633047791284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-40705227-4	35.5147774470336	0	1.29334992501175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64780983-4	23.259366291804	0	1.28417821440595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149464792-4	56.6748199911746	0	1.27843756924441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6366823-4	29.6894021633518	0	1.27640758274974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25472733-4	18.2748579774298	0	1.27896382182528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119440569-4	21.8537182857754	0	1.27813352511482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27702871-4	25.413527355025	0	1.28526777402156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102787425-2	3.80184608613145	0	1.46028189795248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73168807-4	30.9404158172305	0	1.27898379025628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70720151-1	2.96749687554795	0	1.49001116315225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51397969-4	22.2555646462886	0	1.28544462729243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59331882-4	34.4893169446074	0	1.27693679128263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36571784-4	59.4817727159916	0	1.2775124076299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140998000-4	18.4845189597105	0	1.28246077221736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124309167-4	26.4538150933968	0	1.2806608465227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52943850-4	20.2555887219806	0	1.28515658710522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106839067-4	16.1942480641748	0	1.28071314881411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-44905-1	5.74819704858877	0	1.34913207007987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76287950-4	19.2371055562974	0	1.28022920909739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4530996-5	30.289811863899	0	1.27596816021974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99089042-2	4.45321540959212	0	1.34602709473607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95918654-3	8.21599511864067	0	1.32086255236044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137006828-2	6.49261321099748	0	1.40032808232053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89294793-4	46.8446271815963	0	1.27652008541759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29432171-8	113.550047964679	-0.726392886162464	0.210924322404968	-3.44385549224529	0.000573482128708887	0.0122306668350558	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52193370829478	5.79300484392505
Merged-chr7-120684849-1	2.59906290722397	0	1.36476458878961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86834690-2	8.12382438073306	0	1.34332275045592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50470013-4	20.2866321576023	0	1.27854698811005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44969480-2	6.11406361927771	0	1.34377694120929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81633704-4	41.4849630018173	0	1.28050943705508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133207798-2	10.6316949448112	2.01003159453865	0.761803775297583	2.63851618975434	0.00832697242524644	0.0960689159781345	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49388366125291	4.49049261434799
Merged-chr2-79966871-4	37.9035623092372	0	1.2855080182827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85071899-8	103.144139982259	0.0515785485232079	0.184447961693665	0.27963740043314	0.779755709955614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60161658678334	6.6497270333149
Merged-chr5-108669224-8	93.498179645754	0.967547965875605	0.20779533473012	4.65625451664848	3.22013817792735e-06	0.000204891089946291	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.14324684567757	7.11039404185057
Merged-chr5-146781836-4	42.9583422396946	0	1.27882050562023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67195242-1	2.5261234154924	0	1.42367302716502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113355128-2	4.66692464173066	0	1.38350479069961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88515288-4	27.365171118246	0	1.27919466113456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-98666405-5	175.465461946841	0	1.34400764233274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103358797-2	6.37156507174519	0	1.35291355394431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-25748825-2	7.75559122576118	0	1.35217985863147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75877354-4	37.1011198938703	0	1.2758849922136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135534929-4	23.5558326196586	0	1.279070498663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156911130-2	5.45364108660955	0	1.32688196865753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39781508-3	10.7017318819199	0	1.28892211528192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73667762-4	29.2851934453211	0	1.27473137277448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36477091-4	46.9706595763647	0	1.27510107698184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78476978-4	26.2325490604767	0	1.27691485659003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87552600-4	41.631619789503	0	1.28175537089897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106581994-4	26.1032926894435	0	1.27937221392792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111430678-5	52.9907191003494	0	1.28030069833747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97213310-4	15.8106525284578	0	1.2818129163684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85394193-4	18.7973056510295	0	1.27824531324309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58844283-4	18.1349566377936	0	1.28040224488179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25108897-4	21.2151684751412	0	1.29396380235407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11340501-4	16.9417606854509	0	1.28147997237231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34058373-4	27.839230541617	0	1.28222968403974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149841054-4	49.7315368264819	0	1.27417920788009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79143891-4	23.1447043220264	0	1.29360611353575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75171143-1	3.08614849069852	0	1.4352624108631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139233160-4	51.8564643090167	0	1.27887288741705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43769117-4	26.1785586006364	0	1.28290449693507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38423951-1	5.10792698572861	0	1.33975304602146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-65407310-4	11.0157948196398	0	1.29675683582741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-68672014-4	18.7077564751241	0	1.30580077936567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91181771-4	45.305725773249	0	1.27719408826182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111290776-4	23.0806333530393	0	1.2860098676185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-9953-1	34.0280725384075	0	2.43324923322187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111617964-1	2.22705813254997	0	1.74102321422271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8866906-4	17.7793487023026	0	1.28170855667554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-18800578-4	41.9037245450112	0	1.27995425571682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60273571-4	19.3863006847816	0	1.27729987079109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19554031-2	5.93239178681708	0	1.32925572827531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119063598-4	46.4013602524358	0	1.27508828843635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97775071-4	24.00247951261	0	1.28515113260849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24884526-1	2.09045782308234	-3.89795696954791	1.18433665923579	-3.29125754839262	0.000997405519566375	0.0189963454041342	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41074241568305	0
Merged-chr17-46857262-3	7.66867974001871	0	1.28785086162737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9382018-4	12.3167628282198	0	1.28963696595698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46533812-4	22.9897560869357	0	1.28764496812704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55293266-4	26.6596827852345	0	1.28383400408682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50539930-4	10.960954840314	0	1.28119428855621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25789377-4	21.8055232215522	0	1.27947854995934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46934378-4	15.3338353776544	0	1.28168033946554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113945039-1	3.68247711772996	2.34166876580841	1.28857125467261	1.81725981960024	0.069177339257764	0.471175986151537	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr8-61517969-4	44.2354228466751	0	1.27568040664829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115650399-4	32.1749362095433	0	1.28292467197799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12306755-2	7.6919370648083	0	1.31962897561089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9462878-4	24.3699552700019	0	1.27993751739576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36605006-2	4.98996221162254	0	1.47465771038312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89863849-4	24.5230801562125	0	1.27569431525471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53126920-4	53.3543941805351	0	1.28024403863814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91452325-10	42.3260012340882	0	1.27606843555024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140508849-4	16.301846890294	0	1.28010642735991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120220145-4	32.8212144531599	0	1.27893853843012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119484121-3	37.5753214136628	0	1.27743289550135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110058157-5	35.0560355215317	0	1.27654484773573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44496294-2	6.2652313736648	1.58606881352589	1.00436165896458	1.57918096471444	0.114294554813358	0.685075397067848	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.41959898789419
Merged-chr5-30655715-2	4.02042495857112	0	1.41070560503054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116894788-4	12.7547312598155	0	1.28144588552333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128061117-1	2.66149198829018	0	1.39439859021293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9069073-4	24.7862581312088	0	1.28397814878134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5592051-4	11.8735821523037	0	1.2834441274649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103719443-4	17.8767504396729	0	1.28429681137289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38471898-2	6.1176752999881	0	1.307221953973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8675769-4	19.5102571294522	0	1.27638296456139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143518329-4	32.2748546973927	0	1.28355012764474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131679816-8	161.515597902223	0.15495866775858	0.168394456476903	0.920212404853325	0.35746177311698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.64220399199488	7.77221775559277
Merged-chr18-34856392-4	43.0311871882288	0	1.27464360846747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139366016-4	30.7231147791094	0	1.27949083553947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15139745-2	3.69788138370393	0	1.79208286950708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118275424-4	10.6774491835747	0	1.28981109405322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117080578-4	22.8820058973516	0	1.29855998945339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110710789-4	32.9345247389042	0	1.2762075733954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63875084-4	17.6020814515471	0	1.2813091465837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-126817466-1	3.2751586262755	0	1.3338581650864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80785324-4	24.7840489022589	0	1.27664432470536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40574195-2	4.33472199154877	0	1.37719311126496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42424706-4	12.0462651186682	0	1.29821068467954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167775426-4	86.2691459131078	0	1.28270885539078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140778373-4	15.6070228886109	0	1.28714819415762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37145660-2	3.15896712966063	0	1.36637285649766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130858160-4	42.537966733519	0	1.27821914907854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34927706-4	16.8450063636443	0	1.28954440213344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50462539-4	14.1145485598419	0	1.28542846640697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-32865-1	4.26826923855525	0	1.540807113232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57765648-4	31.6834682721215	0	1.27735668435427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3502827-4	81.2157205341129	0	1.27570605958073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70622538-4	48.332717933685	0	1.27560719887149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27249311-2	9.59844653395371	0	1.33755337640146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51520203-4	18.8878035957154	0	1.27840824617622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98708687-4	37.215689138359	0	1.27912583941745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53761893-4	17.2156568124766	-6.03497475544628	0.997333826365606	-6.05110806021529	1.43852908847916e-09	3.49450266973083e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88622088392421	0
Merged-chr3-88237882-2	6.05552834011576	0	1.32543290945072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49987155-4	14.3472167669119	0	1.29315609790558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22717473-2	8.34250697484785	-2.41314043819686	1.16022666421669	-2.07988707088202	0.0375358921882555	0.301588640223011	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.99726316646396	0
Merged-chr2-151533858-4	30.1256483083632	0	1.27897200826751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72968561-4	37.1410977898762	0	1.27467723094644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93246953-1	1.27852507337371	0	1.82653345755509	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23669433-4	18.8485502989071	0	1.2771261371173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32147660-4	19.3142619364572	0	1.2912698437806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77910725-4	89.1859933935048	0	1.28116185754386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50867083-4	44.0915731803387	0	1.27411261925175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167833815-5	41.8882942046126	0	1.27700884814567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17875830-1	2.33840101627177	0	1.53031095232503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39714920-2	3.53388299355848	0	1.40187240035861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69185598-4	22.9335101620379	0	1.27791010455354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144268160-7	31.6643510473244	0	1.27659954851188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77452159-4	35.8883285945483	0	1.27954425835417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97016201-1	2.15690881765779	0	1.47584434980467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52041541-4	10.3298082352597	0	1.29392638495834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35899190-1	2.79034161715368	0	1.42837812707881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21336017-8	187.82724572845	-0.124321247308213	0.160477037131727	-0.774698047335979	0.438518105117459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.84805147908555	7.72755827813994
Merged-chr17-74432793-4	18.6966148791411	0	1.28182964076706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141379763-4	22.2040018898014	0	1.2792344116807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101608059-8	127.068611925646	0.703039175015053	0.164197051374223	4.28167965947664	1.85487877772825e-05	0.000827364563886896	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.7525417345921	7.47473355721729
Merged-chr4-63840632-4	15.8023170356421	0	1.27916802314603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107561386-4	32.0884830838607	0	1.27506062382191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108071476-4	26.3851386410754	0	1.27642108398366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4252195-2	4.32972764942817	0	1.36537218181517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65343891-8	107.98185435243	0.32306925824879	0.232147716601615	1.3916538270467	0.164027250611187	0.882546292172795	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61821939690797	5.95325945743764
Merged-chr18-26863679-4	19.5485256789658	0	1.28690672705598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105981469-4	35.4684850178383	0	1.27525283000338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88207614-4	15.7873531246352	0	1.28349173072301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-49303119-1	3.09694383533822	2.45216511622899	1.7980997457659	1.36375366383498	0.172645108138384	0.917059603024777	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.843323834477631
Merged-chrX-155584810-4	22.9971408387718	0	1.27778915532756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58498615-4	83.5384046135923	0	1.27888238453577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141024948-4	15.1272907520548	0	1.28270656914223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38212833-4	22.1485954559255	0	1.28369970658482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43848630-4	28.9311067731482	0	1.28180042547921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28732921-4	29.2544003189005	0	1.27502413644458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35732233-4	30.2629782919682	0	1.27588948927457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129949556-4	19.9123036688715	0	1.28176269022672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127935489-4	43.2260826733218	0	1.27900526010374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23999700-6	31.3651992688348	-1.30209091791908	0.444404461638656	-2.92996814909973	0.00338996749045368	0.0486217769164149	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53306904408332	4.04986436022924
Merged-chr12-102426503-8	105.972191704236	0.141215889218215	0.150742544842527	0.936801812426185	0.348860512855454	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.78380805851537	6.93723503599698
Merged-chr17-5190262-4	25.9259749109982	0	1.27953262140333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86548127-4	20.4839037087827	0	1.29350489863346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120955374-4	15.2440456181483	0	1.2855891357462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35028878-4	44.4261893762788	0	1.28385451446904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70803030-4	23.9662983368745	0	1.28498827317348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186575852-4	38.5546790091734	0	1.27917717186227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17750768-1	2.49917976673632	0	1.43738668561242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51220082-4	25.5336018493429	0	1.27906766501413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37613719-1	2.35034119988628	-1.68997298625242	1.29539567537183	-1.30459983646875	0.192029143997757	0.989226365287935	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50777107767047	0.581381506691384
Merged-chr18-82867732-7	31.186447375491	0	1.27638181645983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132078563-4	31.0062773039488	0	1.27642949520443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27625512-4	34.663952013089	0	1.2761618201504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62627795-4	40.4916077034413	0	1.27836420596649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43557284-4	30.9673076372706	0	1.28929795676159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33996742-2	3.67598789664861	0	1.406106749241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95195982-4	23.7188160718754	0	1.27756173058068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32771255-1	3.26733876645193	-1.39262718625098	1.07124187096808	-1.30001190580094	0.193596888642111	0.994792976740377	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05138994712257	1.0023426291647
Merged-chr3-117319846-8	68.461466807177	0.504605801922134	0.219417128851035	2.2997557417895	0.0214620621541517	0.197919829738244	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23765880622641	6.73576999630942
Merged-chr5-32881373-1	5.03512441295043	1.15498168832787	0.648540165873683	1.7808946139395	0.0749296686880214	0.500774681438373	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42888275427099	3.41064498239285
Merged-chr16-11433969-4	22.2376706633193	0	1.28543691923095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31109412-4	33.5726523308188	0	1.27599799208319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19666049-4	13.59543394245	0	1.28419244866949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65730532-4	31.2638784568978	0	1.27902605245505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75146221-4	23.7221488986639	0	1.27558777111979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60835341-4	14.9720227548566	0	1.28130992078604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117312877-1	2.10267629043984	0	1.52095069049593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70261854-3	13.3056568536574	0	1.29633464454087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95651112-1	12.913710548518	0	1.30504140271268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44529484-4	22.7869839709725	0	1.27749093653728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117476759-8	35.3328493003525	0.376649850638917	0.230278813339081	1.63562528908948	0.101918034297174	0.630317610182013	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24149069500634	5.6194594348772
Merged-chr5-136217327-7	37.9077664578527	0	1.27704969179516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80391886-4	14.6262495579421	0	1.2871905990577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87327160-4	25.5091766212663	3.36455676986478	1.03663023029321	3.24566723171203	0.00117175719847089	0.0214540896305069	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr10-88008969-2	14.0497154781962	-5.22959298915729	0.810708456572321	-6.45064566276764	1.11374626160198e-10	3.80550790295928e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81856278122249	0.683637474991079
Merged-chr10-66931739-4	27.9843918244424	0	1.28106839468283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111930105-4	12.332050798306	0	1.29580560177753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132780503-4	21.8192447938336	0	1.28676646690486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19215923-4	17.0980729639281	0	1.28367869709671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85256282-4	13.3748035041659	0	1.33593224030829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25437751-1	1.8849092052147	0	1.52659024086884	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99090674-4	31.4306425320598	0	1.27842510143461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145653457-4	22.9026656932955	0	1.28341706909139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167381818-4	19.7764824918013	0	1.28016121969072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25382346-1	2.07447668713287	-0.838562981136086	1.40738908766021	-0.595828821246723	0.551289587706438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40892271875444	0.666688015277142
Merged-chr18-39560949-4	26.7505318591472	0	1.27735868981042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85705532-7	94.1471055020738	0	1.27584407968278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52239826-2	3.97516073924187	0	1.38283212490596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105965366-8	188.765082429453	0.386041299796556	0.151335792931108	2.55089223983048	0.0107447542049824	0.117205168894528	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.3710459258604	7.76266067878844
Merged-chr6-135296558-4	27.5172498389037	0	1.28019311268279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62322859-4	16.0014225029153	0	1.28213898789648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167649502-4	44.4419978212159	0	1.27522249436664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99109784-4	24.657223676325	0	1.27865809519384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40845176-4	16.49246638819	0	1.29010847867932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68863976-4	31.3776791531225	0	1.28678423798614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55471613-4	26.793081755853	0	1.29299267413982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54435345-2	2.9097363862467	0	1.44492845804513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86833900-4	77.271664210832	0	1.27827033111601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59207874-4	30.2768058884677	0	1.27596868181378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53700631-4	17.8220239202468	0	1.28357091185652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125387753-2	11.5376480475387	0	1.29180539416529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143081526-1	2.59440584806313	0	1.33848084392382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119978021-4	39.7684276113625	2.42440048188335	1.15420595722343	2.10049208870445	0.0356855758245883	0.291343033212587	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr5-90700381-4	35.6268317958611	2.04269451920625	0.51654703804103	3.9545179214521	7.66891236241121e-05	0.00257123010381797	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61661456274436	3.56349751288543
Merged-chr11-72696879-2	4.53650630291229	0	2.13653053605301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81163326-1	1.2111296326318	0	1.5904208937544	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-126996580-4	30.1901867474786	0	1.28044539754042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110568719-4	44.3469541638518	0	1.27806907955716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91534655-4	21.3417308775064	0	1.27897142357304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53780024-1	2.71834161815159	0	1.47687787540766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94430954-2	4.26957716734198	0	1.40008501471821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98171542-4	29.4424503837154	0	1.27865029566292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30337074-4	23.4428260242024	0	1.27884818603052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99379757-4	43.3315313362259	0	1.28319666942398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3153179-3	17.0617731829498	0	1.28675814950752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143581182-2	4.09935046088646	0	1.33529093881226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56266056-4	20.0551122411029	0	1.28981608938041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37157167-4	25.3391544415315	0	1.27694394627183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110845268-4	21.2084710399803	0	1.28396713493524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131287050-4	20.7748530790652	0	1.29384311214577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25543856-1	4.3333298985356	0	1.32010199718409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4506950-1	2.58137925143686	0	1.36252639057695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16571543-4	28.5157366041365	0	1.28052671946156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78392360-4	36.4662883296871	0	1.27533094043137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35156627-4	13.0805607172907	3.13392575050775	1.07456526782884	2.91645918990091	0.00354029034253153	0.0501161611636622	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29684500016202
Merged-chr13-34793256-4	16.2435855382886	0	1.2776508725822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117211551-8	50.9434684251396	-0.327057714274983	0.225460301277979	-1.45062218235812	0.146885094993583	0.816553377360337	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56172071054056	5.22429701144239
Merged-chr3-149451637-4	29.2482292474253	-0.98912531421547	0.289620189538164	-3.41524986843202	0.000637235263169433	0.0132910231430162	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.66240465265009	5.68884294254469
Merged-chr11-121734407-4	22.8651569982042	0	1.28408800981017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73148360-4	13.4976534954947	0	1.28093529236127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96331323-2	7.82820944716976	0	1.30556192315846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20111467-4	15.2818574972723	0	1.2794950902918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10834253-1	2.44877552304642	0	1.49109351846605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131026016-4	23.6402542296994	0	1.28417338015855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113397866-4	17.2925531599656	0	1.28293303767888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80172022-4	29.9343445522277	0	1.28215012175917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86960701-4	12.6864217645816	0	1.31411297539729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10876535-4	47.8469804757457	0	1.27722637890738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141653286-2	8.25371518153263	-1.43782637758157	0.858294460361156	-1.67521339585083	0.0938923701710586	0.591486630791284	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56506917466391	1.04220233489076
Merged-chr11-64655312-8	121.574527868028	-0.409759490374026	0.222494400523396	-1.8416620346854	0.0655246008208751	0.45256063933604	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.26656725165428	6.81568470556857
Merged-chr2-128396129-4	13.7969309724714	0	1.28425769287875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-80547382-1	1.81489589630929	-0.382169714084741	1.6263339178086	-0.23498846694392	0.8142176846647	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr10-98881666-4	30.0671981546739	0	1.27972770169308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21135695-4	12.1276359302402	0	1.2880737014705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53141168-4	16.4464951661771	0	1.28996594216445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138261739-4	31.8810968306763	0	1.27514877172397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84311921-4	15.4242380493246	0	1.29442360077156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47031584-2	5.23773305777476	0	1.34423132127629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17584081-1	2.11863699388406	2.4374801046052	1.37058927855481	1.7784176067504	0.0753352930837273	0.502785573882993	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr19-41900708-4	18.0100649959357	0	1.27969630723082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124723834-4	48.1280625610016	0	1.28299519874741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119157914-4	26.1447798117196	0	1.28475937139927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31733082-8	132.423775363937	-0.373431778187303	0.164620534906868	-2.26843982980961	0.023302412468465	0.211283397414224	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67324927495108	6.29147953962284
Merged-chr15-12233229-4	21.5843819888061	0	1.28675218381443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73876538-4	14.2252227610518	0	1.29742450105347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79225795-4	21.198065174694	0	1.28326021702356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98683942-4	12.1598563363659	0	1.28183770976349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39800427-4	43.4849217123976	0	1.27886794932459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-17024931-8	61.9410252664061	0.671714799183468	0.220484891115207	3.04653437152065	0.00231496010208544	0.036293997800114	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69558701024073	6.35892737932957
Merged-chr3-89196675-4	37.7886646540265	0	1.27420924973286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97546327-4	22.9693756504422	0	1.27738463101214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61441543-4	30.4083178123155	0	1.27945871241123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28738158-4	18.9874004357727	0	1.28318867945793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35124403-4	56.7585257754677	0	1.28816540438255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154878012-8	51.1164606069291	0.724287061752175	0.267355531197951	2.70907827680554	0.00674704194003687	0.0819065753182596	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16945388486517	5.8373099894839
Merged-chr2-91206777-3	18.7038833780717	0	1.28682057256218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180428079-7	38.0699306739273	0	1.27626477579178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116366354-4	11.1830708810435	0	1.28639732101602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18821784-4	33.8816449711619	0	1.27713633442572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127780271-2	4.11374135396415	0	1.36890459012409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4908461-1	6.17773046085863	0	1.29648944292559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62217468-2	7.46089425002881	0	1.31867381577956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18036385-4	19.246122549415	0	1.29225975449507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57801396-8	74.9492437367748	-0.109937723121331	0.196795429183599	-0.558639616668966	0.576407696959606	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80538886852594	5.77415786599935
Merged-chr15-3234320-4	19.751316168264	0	1.27805863908102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117121256-8	69.422430284486	0.112168379828352	0.181211882675668	0.618990201813147	0.535922813714974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55661685958586	6.64634344706398
Merged-chr11-98710671-4	22.8490988105755	0	1.2821453154669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157063581-4	19.2022862636816	0	1.27840835589632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137386551-4	29.2229174543676	0	1.27568114745765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101686578-4	40.4510377704837	0	1.2806483822978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63931754-4	13.5163786410035	0	1.28877384199337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25165792-7	52.0506588300956	-1.37596596404992	0.279277197434522	-4.92688259796978	8.35519221264769e-07	6.99972295291892e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19870428934307	4.72293868426448
Merged-chr14-54756540-8	92.3755052280313	0.703514339118713	0.20257557804243	3.47284873091346	0.000514965512352714	0.0112319547297064	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1499150409993	6.78780935845623
Merged-chr7-49070801-2	9.41576147333344	0	1.31330395533533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137558973-4	31.2687871402888	0	1.27862271360032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37320235-4	25.6334350317847	0	1.29092299602296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85255632-2	8.22022421814875	0	1.3050232691762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3135434-1	5.42966479442879	0	1.36885699436792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21161499-4	39.4896036145258	0	1.28732596807958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25570485-4	55.4506810711012	0	1.27524049931103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30738659-4	33.9699222753927	0	1.27930321476795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83266159-8	82.2709284412603	0.00958035389487819	0.200734713976561	0.0477264430505869	0.961934259604899	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.86333246284213	6.86812048862212
Merged-chr6-140609754-4	9.31800687905607	0	1.28433740109081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105751909-2	4.32342034973295	0	1.41950962410201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75961242-4	46.2343412270214	0	1.27963062950425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130428865-4	19.5630350300095	0	1.29674562078829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3139528-2	6.37556071902216	0	1.32149978639837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97447180-4	22.5696143355628	0	1.28008646581003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-5101421-8	79.4822276930845	0.457408170979316	0.211346674460123	2.16425535035149	0.0304447574121598	0.259616745120057	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94175133193445	6.38482989104381
Merged-chr2-167925511-1	17.6307311251432	0	1.27902351813072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25481080-4	30.2545605425859	0	1.28508119345544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21934949-4	18.4053238751996	0	1.28256299469078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96765800-8	67.7805536326259	0.85772006877845	0.250968282468898	3.4176432987493	0.00063165832193354	0.0131957623737433	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60868016647263	6.33853060830194
Merged-chr4-9118468-4	34.2754060621142	0	1.28829429770428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60892974-4	12.1855246543316	0	1.29017317582969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47190183-4	23.7605400713771	0	1.27665175608602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68514157-4	22.6315633990588	0	1.29535534254481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-28944454-4	39.7194247102153	0	1.27722879663351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46798516-4	24.9088016609993	0	1.30124835414628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110379522-4	22.2747190460168	0	1.27633389123585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99392148-4	30.271935881237	0	1.28012106364941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81298097-4	33.4233601825121	0	1.27644780076632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72263021-4	32.8377791096785	0	1.27620306471045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25708183-1	7.44528477306059	0	1.295516040024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135517119-4	34.8321068940496	0	1.27649261170819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20372317-4	24.1190510994112	0	1.27609666592537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11915682-2	3.52560865055151	0	1.45610930474055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83845400-4	44.6454091763859	0	1.27837992833945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36082413-4	32.2324934503475	0	1.28062369137683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93435712-1	2.0965908379501	0	1.43708950162043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131473979-4	16.6288090557847	0	1.29296554475819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119113961-4	17.811385216155	0	1.2811193997924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71179076-4	19.3982846674577	0	1.28878884804589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117158739-4	75.7230993921066	0	1.27668332449333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64925868-4	45.2311641944923	0	1.27711709793006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124272315-1	3.01264674147198	-1.72935218888384	1.05196084209866	-1.64393209297961	0.100190230103596	0.621691271137553	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46561742049689	1.72320011534497
Merged-chr14-102806735-4	29.265809212804	0	1.278359948258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37971927-3	57.6196857438674	0	1.27763538100267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156523200-4	25.1649390547893	0	1.2766825201733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116389377-2	6.46324595067686	0	2.22037944608159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38187624-4	17.6747573504992	0	1.28412787442171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132243055-4	53.2878213076214	0	1.2805029673023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67329591-4	41.9921280353304	0	1.28151343978348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167225136-4	29.1410855164729	0	1.27675693584005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63384893-4	20.7653855377374	0	1.28303584114355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39430913-2	6.65957836853149	0	1.30856142742855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31374576-4	16.0514691450475	0	1.28330471320581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45247794-4	31.1033627318855	0	1.28268432187902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21283195-1	4.74154702089384	0	1.4095820751136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4367315-4	25.1178013065894	0	1.27755698594375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21158756-2	5.57830106382777	-3.34403183199877	1.07857367976159	-3.10042039291922	0.0019324615203125	0.0316567135889548	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49392496622848	0.423054662900563
Merged-chr13-113623035-4	38.4420271837441	0	1.2741547343926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3164536-3	19.9596400530494	0	1.27927686992418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78217109-4	35.2379447318374	0	1.27780258084457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102025949-2	8.52258287587413	0	1.28981545654957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73612210-4	19.3655439421625	0	1.27872483744815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171117137-2	5.18138906689615	0	1.4462373474428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48234675-4	15.335057486196	0	1.279831631335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34010038-3	13.7252391691528	0	1.28580948577032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116314802-4	31.4282280991439	0	1.279830835574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-59854981-4	12.6208008756401	0	1.28570863448118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5980237-1	1.8699919416114	0	1.38841870571113	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120519918-4	26.0604539272513	0	1.2828341840662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178342790-4	26.7673107807258	0	1.27772715415747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167336622-4	12.8858929950451	0	1.28664720980074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83855042-4	18.5916267068075	-2.79331356621233	0.499486522390037	-5.5923702462408	2.23990535954475e-08	3.54404008776782e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64216030688094	2.95988517553914
Merged-chr10-60932157-7	48.716682529871	0	1.27499774805188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-19144649-1	2.57631677567504	0	1.40440523276944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21895709-4	22.5448181697039	0	1.28154539067343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50182631-4	22.2568072212964	0	1.28510731568804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80782353-8	68.1555500306186	-0.240712562760565	0.229379937037416	-1.04940547926517	0.293991537467463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92987968430918	5.66088166801418
Merged-chr19-42000080-4	17.6073306539912	0	1.28584277401668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27764620-1	3.66699660337479	0	1.42860258742288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35050227-8	110.699209428647	0.619334770595883	0.2164531676239	2.8612876281488	0.00421924074847198	0.057121840964383	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20958592074237	6.810509282465
Merged-chr12-41275032-1	2.44285153403438	0	1.39738442968529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12009369-4	48.9385255964951	0	1.27445454825378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117717776-4	35.1150009523797	0	1.27860825343627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92410328-4	27.6067362309209	0	1.27461726275514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98562223-2	3.51495619896998	0	2.41752991022663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79016002-1	8.75069880898202	1.36585602574335	0.553118381198386	2.46937377634078	0.0135349759536193	0.139049770973925	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33689596885212	4.11754644797313
Merged-chr9-69109800-1	2.19496253584369	-0.844416892584584	1.43756184676881	-0.587395175019823	0.556938333580031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0
Merged-chr1-172513122-8	61.3314898360467	0.284759359839264	0.245361104933855	1.16057253620548	0.245815779524959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84006388395125	6.11682711932013
Merged-chr1-35869751-4	20.4520842286528	0	1.28537784105244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34389432-4	19.9704363949129	0	1.27653995381321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36631783-4	22.1837693546818	0	1.28758379189739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32508877-4	27.3316443941594	0	1.27916169309097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80919260-4	20.8326339587957	-0.332112256822278	0.771148954502961	-0.430671992593621	0.666706886154352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39090212978678	1.19380919831911
Merged-chr3-20027520-4	46.3435377119749	0	1.2779413579618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46245912-3	11.0779641809509	0	1.28427187274984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83274278-4	42.3917458550854	0	1.2851682929981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83868108-4	10.0071565703771	0	1.29076312918996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134302942-4	18.1741664989178	0	1.27860085474252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167072027-7	28.0446078818694	0	1.27804663943934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55541895-2	5.25959360907788	0	1.36019357580797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63714905-1	2.39977182838271	0	1.4439023014134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150583657-4	20.782140005451	0	1.28273540164028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8509866-8	99.429510136243	-0.667915871221199	0.174011606729946	-3.83834092318771	0.000123868421940322	0.00375605842232589	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.73694380140316	6.04902874462368
Merged-chr8-75067500-4	30.1075521635528	0	1.27811043542461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47184397-4	29.8966168114971	0	1.28023050475254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40679852-4	12.8406449260689	0	1.28477569833276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12016376-4	12.9925600112433	0	1.27906059324737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99563860-4	18.6527179026869	0	1.27831998406919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120441936-1	2.65882386942048	0	1.5508689638428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25858725-4	11.7696823486717	0	1.28437286679973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101498677-1	4.55412381499595	0.120289149374013	0.926193102104551	0.129874805913243	0.896665477407646	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58630956684567	1.41959898789419
Merged-chr9-25486458-4	36.9777129647384	0	1.27638529737328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68203534-1	1.78778493176796	0	1.66751852145761	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48787939-4	34.1964853960593	0	1.28081499871186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99833991-2	4.17292474386194	0	1.37151597784113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4567466-1	7.28988595495386	0	1.32337413819269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39741388-2	3.29465558492662	0	1.924177128147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81351650-4	17.9141483323073	0	1.28127815558993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64664162-2	6.33786970384778	0	1.36650729674733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34866444-4	10.9632443140812	0	1.29062928763919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16215140-2	5.15669004974926	0	1.35818305693978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43321639-4	34.2941943357356	0	1.28148996664599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8610088-4	55.9049292222171	0	1.28265087338314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148583533-4	23.7676211110138	0.261586983653	0.312944664457086	0.835888939365097	0.403217385360252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46471858663412	5.73408535086829
Merged-chr2-20899521-4	20.0914799405181	0	1.27940651446696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88714383-4	26.0774162472385	0	1.28242876353473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58531454-4	24.7264589010498	0	1.27887976830277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9737843-4	55.4750131474063	0	1.27657687876198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75783319-2	3.53183833232698	0	1.41232742242055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22358997-4	23.9675012383025	0	1.27427579080944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143631759-2	3.24118199051994	0	1.46782811688195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55467771-2	3.8418088823071	0	1.38406946774725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35130849-4	49.3639511921437	0	1.28611282063354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55476421-4	23.7070610273236	0.543589050729	0.299122152136918	1.81728115703106	0.0691740736839973	0.471175986151537	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72590710655537	6.21374113223896
Merged-chr6-22490949-2	4.36563133433449	0	1.3792565703362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7222726-3	38.0746471975651	0	1.28232502193719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124478174-4	23.2510874063359	0	1.28501015638706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9110570-4	18.6403981976176	0	1.2811873533737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56064570-4	16.1853250173778	0	1.28278520895845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92658773-1	2.65696601425886	0	1.43631129523759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30616854-4	14.7035088991254	0	1.28118265630195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80833724-4	16.4682842667292	0	1.28598930365968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75152842-4	17.0603413071644	0	1.2849189127537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72336250-4	21.3551944762731	0	1.27881543524354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25355493-4	36.9771856513896	0	1.27444751756554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-20033107-4	18.2910151820916	0	1.28019025866182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28751949-2	5.87991751710225	0	1.34323055845826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126826611-4	10.3630409746864	0	1.29257899506518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104384184-4	16.2219314397288	0	1.29407320490567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25440453-1	3.27308741997002	0	1.36100871318451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78919476-8	53.1741872167276	0.0849474318434109	0.21357489495882	0.397740716949855	0.690821320474353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13791160539557	6.22318391819147
Merged-chr5-118466549-4	16.3111164426029	0	1.29012426656816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35172658-4	19.2463959587225	0	1.28029776561499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48433692-4	14.6619695835991	0	1.28066902596519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91485898-4	16.4845402226866	0	1.28605472829852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20698227-4	10.4442273855664	0	1.29169240280963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169778829-1	3.59472104870819	0	1.45426145130549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66494599-4	34.2542378700813	0	1.29468799741914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3134517-2	7.00642593152202	0	1.3423490499398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50840635-4	42.2655995608387	0	1.2741385319688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29887692-2	3.66040250085657	0	1.57460468248386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78149289-4	23.8851856670461	0	1.2820730515239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151819409-4	23.9811081909922	0	1.27650184192839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71662193-4	16.2769485607935	0	1.27821927895466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125183762-2	4.42074176582529	0	1.30888239460256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108446340-4	24.1478491958322	0	1.28883281197551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106500159-4	38.4709395488889	0	1.27875740425342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43772871-4	32.1571086868012	0	1.27704248800595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24989018-8	71.7023746995501	-0.461508601536632	0.216178171345471	-2.13485292554863	0.0327730255566735	0.274210771834364	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30045420249606	5.78665271613187
Merged-chr11-52076462-4	39.9616282318451	0	1.2743768778074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53400507-4	25.2247703134825	0	1.27951463812307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86556855-4	22.3633916676115	0	1.27643962784679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107810617-4	17.8236758827562	0	1.29208177799242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89421694-4	34.602981866247	0	1.27834645453605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5336044-2	2.58863332620275	0	1.44910876344092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32608251-4	18.8222527545208	0	1.27920375196093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79626871-2	5.96476961182705	0	1.30218842557158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52061357-4	41.6142731074506	0	1.2736898887917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33353639-4	20.9163156969319	0	1.28435605972641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73941961-4	18.5159405865748	0	1.27998966867132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24879319-4	14.395955526437	0	1.28655812934773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166697477-4	14.7007727751344	0	1.29646492673911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60818854-8	98.1884450038091	0.363093490564924	0.204826206509739	1.77269059829832	0.0762799898481865	0.50733763019029	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32177550899452	6.72931259791367
Merged-chr8-80948589-8	96.6037322741975	-0.291419562652315	0.222535842748488	-1.30953988828523	0.190351535316403	0.983064208234069	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10565805981877	5.81081901113544
Merged-chr10-13273934-4	27.8998877224202	0	1.27558902274436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8769274-4	16.1450937463494	0	1.28663748447376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9605650-4	49.984348097727	0	1.27687945714389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115763447-4	16.209613285085	0	1.28411259395393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75172256-1	2.29744494990922	0	1.39296042124886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3427857-4	14.0225323183473	0	1.28456800060958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171129451-4	39.4678654223057	0	1.27985654073493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3871847-4	11.0825562541149	0	1.28325569376705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27012128-4	13.920212990304	0	1.28130061491185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70140744-4	22.0096179885476	1.30070480693207	0.576968790634761	2.25437636843594	0.0241725006590461	0.21709403904151	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41639921586504	2.89188180851871
Merged-chr6-17598726-4	19.8670125166401	0	1.29127913407538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122939818-4	13.7451195680531	0	1.28992012638274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64592531-4	40.4050418169931	0	1.27794327766091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55733964-4	23.3827203368434	0	1.28160785194253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69081620-4	11.9296863625092	0	1.28941695893985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55507223-8	68.8604478434425	-0.238550299833252	0.204441346218859	-1.16683980146501	0.243275070209477	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10393752187125	5.84710786777629
Merged-chr6-31157164-1	3.84593059840152	0	1.35565264560346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12224136-4	34.8509112593962	3.62475315707759	0.973662224079457	3.72280352203722	0.000197022840128407	0.00540497670488283	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.22772873920999
Merged-chr19-34517408-4	14.4387637573556	0	1.28376438307114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142448243-4	13.7708792164494	0	1.27939203197924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25582247-2	3.19031110274621	0	1.37881280078275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4113849-4	19.9734654562571	0	1.27943716993343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132567529-4	62.661548155206	0	1.29581144426262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_GL456392-22150-1	3.80854205144366	0	2.4332522906392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22799726-6	34.8525426020789	0	1.27398913732706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16048307-4	44.5677686194527	0	1.28254757264131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69516705-4	30.2618322684886	0	1.2753537286005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54237191-4	18.2624145375197	0	1.28209249635861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120518287-4	31.7565564463259	0	1.28933447906782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112897700-5	45.1539439923778	0	1.27467969015663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115066930-4	25.124476361039	0	1.28641613057185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148527237-4	20.5347967413615	0	1.28259142093919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34495185-4	20.35639512051	0	1.28346702526962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80831701-4	13.1016828547462	0	1.28458398067737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48998868-4	24.2431527133237	0	1.28099473280637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101909183-4	52.0986302077763	0	1.27869985487283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151625453-4	13.2132822631437	0	1.29103236937788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19170792-4	20.4690931419396	0	1.27785387408881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47508132-4	24.9224810965515	0	1.28033663177246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34907358-4	32.0280589474427	0	1.27936659405468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42841751-1	2.36016421442843	0	1.36518863534104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140642267-4	26.1791214383882	0	1.27539880246564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80933786-4	41.3614135374853	0	1.2838768626566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63616661-1	8.90975992324002	0	1.33841753286657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60515598-1	2.10680278984581	0	1.48511373401774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52538544-1	1.4625640115961	0	1.73043212585428	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9125397-4	41.0201696637658	0	1.27707817753122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44070829-4	11.6494778474068	0	1.28347465733367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28616844-4	40.6749969110899	0	1.27695470283977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75863918-4	27.4695397371597	0	1.27757788449194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76202082-4	20.493578210632	0	1.28744079043446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3360154-4	24.0534898071161	0	1.28072520597639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5864576-7	47.8014978277779	0	1.28153469357264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159736438-2	3.3838495182562	0	1.3503622903418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125463033-3	27.7806300766118	0	1.27615343701195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108554756-3	10.5999687081082	0	1.29087073084851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93917135-2	8.17221062353744	0	1.30414809418141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109750863-4	41.3473942573485	0	1.27794726410442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135655378-4	37.616002129212	0	1.27428534919519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99194848-4	18.1960984922243	0	1.28182828599883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101686418-1	2.26545468530078	0	1.49532090983501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28644264-2	3.56137958657282	0	1.39195315428141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160210035-4	30.7959510347338	0	1.2749099697701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73058911-1	2.16511234247146	0	1.43042313509879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137909629-4	11.7524661774898	0	1.28423197541526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16571133-4	31.180586211377	0	1.28100284681561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171827862-4	32.5433889204855	0	1.27972859926556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156986401-8	100.303963420615	-0.374076220734684	0.15623435703773	-2.39432752070242	0.0166508727807641	0.16242244107058	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.15191605067402	6.78539200127178
Merged-chr18-39636285-4	12.4347336826492	0	1.28656488994409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52914730-4	39.5899842040029	0	1.28001626630959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21925477-4	11.1986396894617	0	1.2845961541668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191850037-2	22.8641432289917	-2.24598228323088	0.433750797317605	-5.17804761886422	2.24220006886846e-07	2.41381887479866e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3711699031622	2.62358588376636
Merged-chr5-72291473-2	7.1457569165992	0	1.37306164006969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91433708-4	17.9285615907233	0	1.28538772106904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58487433-4	13.9869017122425	0	1.2951695927078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124756910-2	4.78147462793217	0	1.37769676997942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29498282-4	19.4251437004439	0	1.29112323968958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65960465-4	10.1773414406552	0	1.28562925831718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16879922-8	75.7037376274968	-1.29848057428832	0.245108547700914	-5.29757361164227	1.17351602357624e-07	1.41745985354184e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.99731884237619	5.74140496853731
Merged-chr8-104373831-1	3.15872313018268	0	1.37391818363266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73767342-4	16.3895532928655	0	1.28183992168573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21213620-1	2.95800612045101	0	1.36582620978196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6444053-4	12.5316970013873	0	1.27918518655234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16210749-4	31.5139871808162	-0.339564735390188	0.230472865396694	-1.4733393226388	0.140659562616776	0.792103414631529	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30825859947308	5.90021687821239
Merged-chr6-82714411-4	11.0489114169685	0	1.29007386486008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173771946-4	12.4942187415707	0	1.28617690011252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18013439-4	19.1149180981874	0	1.27634455774554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155091542-4	42.645188649654	0	1.27476101935132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86214416-4	24.9345376187713	0	1.2877916007031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36720130-8	79.7350032414888	0.497354531717566	0.168621593504904	2.9495304923868	0.00318257165843695	0.0463800908992464	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.29893188097755	6.79854431772732
Merged-chr1-177569713-2	3.29997526235575	0	1.39544721219271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135300472-4	13.6253377284864	0	1.28098723540292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52059944-4	15.9711436556588	0	1.27836887127422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43094580-4	18.1265861647099	-0.172183772105461	1.20933883652693	-0.142378435972462	0.886781094452756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	0.382164212378408
Merged-chr11-70442088-4	24.8950122220194	0	1.29215577202821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92052442-4	18.5104476053107	0	1.27855685738163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-67576453-4	26.4663986395476	0	1.28533126952308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75186442-4	15.8611046384903	0	1.30560797763168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123845274-2	6.61670830599294	0	1.33269554290169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73172714-4	56.0570627097063	0	1.28458722939613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86065141-4	29.4376071946426	0	1.27839012816107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90713353-4	35.7993040472984	0	1.2796854630645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183320944-4	20.7524466671007	0	1.2824990914126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45262154-4	42.5403602507734	0	1.27737484713541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91073697-4	12.7648453780683	0	1.28634348627679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33311265-4	26.9196503391901	0	1.27745317955955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54936664-2	4.73143316138153	0	1.54225600211192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85596088-4	21.097034278652	0	1.27918934170865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130834472-2	11.6958741422718	0	1.35524709334971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13438608-2	6.75555628532088	0	1.31639876538917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28109544-2	4.51469515452615	0	1.34782398956365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51881363-4	13.7550345572677	0	1.28265436868487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22282995-3	22.5351812921279	-1.0161975888044	0.46084804476919	-2.20505999827633	0.0274498846034782	0.239310284555193	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38573755635274	4.14675645184521
Merged-chr9-119568864-1	5.55624902160878	0	1.36777294809822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23274536-1	4.30299919257869	0	1.33350472590006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84084138-4	11.4918941710839	0	1.28712796144202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138262575-4	11.3107054581364	0	1.28557004644443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84108175-4	21.5792386624697	0	1.2862719303852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34135527-8	103.657414622502	0.196560285190161	0.188588643541059	1.0422699983383	0.297286517839054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37560541660602	6.59448046490835
Merged-chr17-56075099-4	36.5396087658451	0	1.28039414166439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53434859-4	19.1041154789973	0	1.28330693476708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38536557-4	20.8592458355281	0	1.28404950855823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54823076-4	13.4760626320273	0	1.29957038881083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32192236-4	26.5679602357214	0	1.28362712187117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31336858-4	49.6164881669317	0	1.27448180377077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110970026-3	23.4297010274625	-2.58106157923852	0.481009849125545	-5.36592251474845	8.05365129370789e-08	1.02787870593484e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55668603555723	1.83247173307855
Merged-chr6-31080331-1	3.7368352157617	0	1.32273012076029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73148922-4	18.3484916495707	0	1.27716324523267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13558791-4	68.2026269425397	0	1.27544429300539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31039823-4	31.7126031665847	0	1.27719692519692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88635758-4	26.0538127621199	0	1.28842526366037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132620183-4	18.4209137288745	0	1.2900544356483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150828893-1	2.51723905251659	0	1.36188841710989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45959832-4	28.7956327391806	0	1.27772591563723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36941358-4	24.8221022286249	0	1.27931220948975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31079856-4	47.9977487136793	0	1.27601465085235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97430498-4	14.9191608999385	0	1.29118276322062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85524609-4	30.2600906146219	0	1.27996738352685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16314054-4	35.57375752939	0	1.28327417302162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38871207-4	23.5437025742144	0	1.27772618185815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-59845923-4	16.3788278004991	0	1.27806176037821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71279593-4	17.7621426191723	0	1.28770559699824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38463351-2	4.01652377468546	0	1.45845315755127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20661162-4	24.0982626561429	0	1.27711195222811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14842597-4	21.3150597479491	0	1.28326595012763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8224086-4	21.6726447071196	0	1.28227272614884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21289823-4	22.4838098222668	0	1.27823097910613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180957298-4	67.6121527007627	0	1.28284794586639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91712982-4	71.5648789549734	0	1.27979454035436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20377512-2	5.78638913265253	0	1.40279303606637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60481193-3	13.0248325999902	0	1.31486937119972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108582377-1	1.78776437773958	0	1.40047291591593	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113418309-4	38.1265637853001	0	1.28282684718236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12802993-2	3.96101053469298	0.10476360740009	1.37117409952851	0.0764043074005807	0.939097442815095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr2-170330015-4	17.1915095301198	0	1.28539407940296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84119835-1	4.64821340737941	0	1.36244264561439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77030575-4	44.5475381248217	0	1.27678537372361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58415397-2	4.97705788653483	0	1.72653526608364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113635062-1	3.09788511881631	0	2.04905256647175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140529294-4	22.4577706615266	0	1.28483007313715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144241100-2	8.25373555649616	0	1.36039592042519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60940158-4	31.170240760539	0	1.2760531827352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127240293-4	25.7388050841727	0	1.28274567784651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69586201-4	14.1867166154135	0	1.28584850249577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105073190-1	1.70429678093948	0	1.62314950122054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17756973-4	22.3138983486183	0	1.27710632202613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88287766-4	15.9376835207915	0	1.28352661073964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39278522-4	22.5918552177675	0	1.28602685354726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52924504-4	14.227510643414	0	1.2917905424653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51709358-4	55.5807131449865	0	1.27383256072685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68061222-1	5.52749397267353	0	1.29931326932218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105723583-4	25.1935507289393	-0.626184538502855	0.641238772493204	-0.976523200660783	0.328805256456668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11604132580481	5.14237932350266
Merged-chr14-33857168-4	12.0085490991035	0	1.29135193694142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95571998-1	6.29053585200269	0	1.31490083733222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73490104-4	31.3908645866545	0	1.28317624092738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117022026-2	5.37555422618278	0	1.33743975310367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39266771-3	8.33339691453908	0	1.29362151721152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144316422-2	3.76159597290854	0	1.35120169949751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88654856-4	24.8699163217742	0	1.28711931180879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4567793-4	14.1082666912771	0	1.29797091699716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119000197-4	28.0280727455881	0	1.28979423936297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26498456-1	2.18703424765176	0	1.47399034393401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43786767-4	22.7961335560471	0	1.27779116408371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181274000-4	34.5189557424591	0	1.28460189395462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23984390-4	12.109342040071	0	1.28095126205395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11804648-4	12.8491453183027	0	1.28645346030202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145808533-4	28.6017135006439	0	1.27970791401645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170220591-1	3.46174565964785	0	1.32681788775257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128750001-1	3.03811287933872	0.0379220848001346	1.27555314363764	0.0297299136373007	0.976282454828525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20617892157811	1.03956264035389
Merged-chr12-95747047-4	30.0526738239994	0	1.27479168417473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59004250-4	16.1936005263122	0	1.28527289906128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116634008-3	13.4736356536479	0	1.29235628006942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54112718-2	7.48061823911683	0	1.35091199852622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17730463-4	13.4670183132314	0	1.29295027904184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119813172-4	72.1332873215694	0	1.27767686901746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11461603-2	4.69517839791463	0	1.3638132990634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116409677-4	18.7744020835878	0	1.28268250723886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134093158-4	95.1998508232845	0	1.28227312402587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91354730-4	38.0197512523219	0	1.2779634472099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13601295-2	8.92522042594009	0	1.29932153541884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130839950-2	8.34436445785182	0	1.30328413231785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59049041-4	17.5781778139918	0	1.27953031335107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100499960-1	5.25780482263538	1.64374196674022	0.925266640563111	1.77650624661001	0.0756495132506212	0.504321422788833	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24057496461362	2.38963397465878
Merged-chr2-35661556-1	3.59539391337399	0	1.33115312326967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120009442-2	5.32821909381583	0	1.45466865454553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32113734-4	31.7725157198806	0	1.28222678083096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46062013-4	19.0872862236872	0	1.28353976048124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25548580-4	22.5048821941711	0	1.28354596435491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101973918-4	20.5510748840763	0	1.28133443764316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95990561-4	38.9154008748014	0	1.27841785700695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51734763-4	23.3493913481484	0.836711858491567	0.407879474464857	2.05137034558884	0.0402308946516437	0.317541737155007	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10238435626017	3.96383044218457
Merged-chr16-55505262-2	16.1126592454515	0	1.28794416768404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13144789-1	7.88840826594573	0	1.33091993404651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125720247-4	12.2208222672394	0	1.28228189278296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14631779-4	39.1313428456608	0	1.27489057457669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10390924-4	24.5707241962992	0	1.2865143581304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62681127-4	18.1476842604849	0	1.28961788741075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43448741-4	19.5757356594923	0	1.28990527156381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60596171-4	22.8919905244172	2.45227805506012	1.15541277295163	2.12242595241137	0.0338019847513889	0.280354563011914	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr8-115614375-4	25.7379064315581	0	1.2770365603493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43553984-3	7.18312403775293	0	1.29782640699577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74867022-4	32.1757842818268	0	1.27526316453369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166493095-4	44.0428955589055	0	1.28241350639461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128392484-4	36.7333425655846	0	1.27677619559189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87448946-4	17.0377633876459	0	1.28992036787228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25590973-1	2.37708411195493	0	1.48217236139429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8640982-6	57.7307325836647	0	1.27904385636896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122619687-4	24.3623691368898	0.899043369642935	0.430894103037393	2.08646013789823	0.036936962415616	0.297995732266684	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90669052365689	6.10348034871524
Merged-chr1-156666008-3	22.478553464774	-2.34015758148352	0.471624007298905	-4.96191361183269	6.98020418200784e-07	6.04340877584918e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84902868735675	3.26324053676785
Merged-chr17-10359603-4	32.7143037265211	0	1.27592211991873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130821791-2	7.75083682252293	0	1.34675269819372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102309186-8	92.6647987787273	0.0384944492095459	0.197076996987614	0.195326952399042	0.84513699845812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34567779491289	6.37123813181003
Merged-chr10-7064289-4	24.307476209154	0	1.27792585195391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142794797-4	28.2551506345135	0	1.27711356155766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135659668-4	39.6742214402333	0	1.27732063162192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52903375-2	8.16389369482025	0	1.3418632402384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95213169-3	9.38079769639529	0	1.28835058059779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85498037-4	37.53879147739	0	1.28384590627341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18007278-4	26.3978822779599	0	1.27972444237838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115331147-4	15.0023125004297	0	1.28767451429002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104111333-3	22.3180659089824	0	1.28879384603456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88865372-4	16.8940659741889	0	1.28589690718703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102245280-4	28.8055931310214	0	1.27839794408271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167735066-4	13.1013542851784	0	1.28444571751113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74847798-4	15.8293067001222	0	1.29594839543514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160044751-4	19.4122841232335	0	1.28460675995399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63176627-4	28.5857034112179	0	1.2775804354961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105922034-4	18.7189213572868	0	1.27782490959302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143162204-4	67.7052145743813	0	1.28279993194348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9302750-1	2.23260650899754	0	1.43278708089975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87635524-4	16.8283841993496	0	1.2865268337205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141766563-8	50.85495613997	0.744793633195123	0.225755815565898	3.29911161459191	0.000969913385323649	0.0186137915058324	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4041567641968	6.14318360248583
Merged-chr15-84994670-4	24.727616156771	0	1.27761651338769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67345673-4	17.6683052442695	0	1.28111564477646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121660888-1	2.07216492068691	0	1.52332253047938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103661838-1	4.18216855049691	-2.11064780962753	0.981073146035123	-2.15136640744621	0.031447290479472	0.265600962087576	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34778010041209	0.898163539755574
Merged-chr14-102911777-4	27.7821161859242	0	1.28413922118572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93124291-11	168.511069969255	-0.380398789568521	0.151271409045491	-2.51467737339661	0.0119141354876506	0.1266126358068	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.55926919910296	7.17078642655202
Merged-chr14-121423117-4	19.9335051346061	0	1.28100681058635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122902959-2	6.31028336626099	0	1.35369572917511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57606430-1	2.41868523797809	0	1.42917471985354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40585024-5	86.0811397003569	0	1.27691954243695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36712045-4	23.6500979421288	0	1.27878088702262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63815865-4	17.246978917981	0	1.28863211112743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76171477-4	11.7169778415857	0	1.28231469722503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3221336-4	35.6778857700285	0	1.29051973334378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58734339-4	31.4600101241517	0	1.27809515185703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47354269-8	53.1402295873459	0.254162140889989	0.242300671466152	1.04895351445815	0.29419951377271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75986304893663	5.96327999847886
Merged-chr1-151620412-2	4.85316977358616	0	1.3355023710684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54218513-4	40.2256617082652	0	1.27353667110007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99388285-4	43.7773027916259	0	1.27262342294806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145112548-10	108.813894217662	-0.378988099675049	0.173141898260006	-2.18888728542138	0.0286050334294521	0.24702319472459	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.87905294079069	6.41790242924491
Merged-chr7-31031918-8	80.5343754237545	1.18711718328936	0.170068476879407	6.98023058165641	2.94695985872874e-12	1.67453946894338e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78121971470973	6.97696121064763
Merged-chr18-77944890-4	15.1039079307642	0	1.28250812273584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107101178-4	12.3230268019248	0	1.28733926132214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-63956684-2	3.14504155435805	0	1.37148141671627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71190804-4	14.4840952503031	0.814514091383371	0.707127333399133	1.15186339561792	0.249377211969193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17789877512918	1.8131505516485
Merged-chr3-97993744-4	10.351630068109	0	1.28427857496023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167370089-4	14.968439492138	0	1.28407042454288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83483653-2	3.94158888776221	0	1.32249071353023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103382421-2	9.19786405876916	0	1.29305646481849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35133181-2	3.15697787129872	0	1.41618327039031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98878015-4	21.8336246314061	0	1.28332986414407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185294821-4	17.3269815871994	0	1.28912439070634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8239699-4	26.3799586148698	0	1.28131939010463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30678267-4	23.5442086356883	0	1.2862928668621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44926437-1	7.53451104324224	0	1.29543066201107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53820872-2	8.2660055794547	0	1.32902353753012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38102689-4	22.427963632414	0	1.28869899803072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110970851-1	1.9103493999284	0	1.67000202387582	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94412681-1	2.57151199123796	0	1.3453991305461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82799131-4	17.4653000881761	0	1.28024008648611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45589314-4	57.7882036106949	0	1.27813022475135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71048341-4	18.1481799903921	0	1.27843588354321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13524317-4	14.9640692221988	0	1.28999943834624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40295379-1	8.71754965407004	0	1.29250125937677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57927936-1	1.93277139271955	0	1.39400251596844	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99050136-4	32.0636879872267	0	1.28001427222578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36562962-3	16.2745277421413	1.64874034894531	0.512401913727802	3.21767016237404	0.00129236342084669	0.023196143960101	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51237565097188	3.85662470721994
Merged-chr2-33755827-4	26.3873636477046	0	1.28959072044466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95128159-1	2.02435466175024	0	2.26247388968692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39451267-4	38.9145768208083	0	1.2794495033851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165982679-4	23.1981445970354	0	1.27933899889081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67138753-2	7.31283036396621	0	1.62620862478031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55421463-4	14.6576016901395	0	1.28412268202582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75504931-4	23.0595870975495	0	1.27668105724414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59287357-1	1.51918680398063	0	1.61528251360177	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67696105-4	26.0329745886571	0	1.2775727642047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58232626-4	27.3563942223085	0	1.2824415085395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125411139-4	24.619442208484	0	1.27774979454783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91756801-4	24.8698696764021	0	1.27448332870638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82753243-4	35.450850532654	0	1.28674259041685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-190998298-2	4.27562232590914	0	1.34912736353223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116487691-2	2.44899184953786	0	1.47540434623627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86967485-1	2.04915286221042	0	1.56657613727633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18999593-1	3.22910895143977	0	1.36321226482207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159784883-4	19.4630136897023	3.57051270314287	1.02586103198427	3.48050329608154	0.000500472666090619	0.0109802460660223	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.40918939303534
Merged-chr13-98819290-4	11.7973311924078	0	1.29345014017436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83407300-1	2.32441425392352	0	1.44528428036537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7134752-1	2.19296285442294	0	1.39349322718831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36365224-4	15.7003173922896	0	1.28949280345509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5814033-4	21.7457878726163	0	1.28436406200038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127597480-4	19.7413047515653	0	1.27600655399987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25052982-8	90.1216083363626	-0.0314939695853959	0.178167537458435	-0.176766037375036	0.859692167158587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.82336880018801	6.73797563089991
Merged-chr1-149954171-4	19.6846205929527	0	1.2800611419929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61409871-4	17.357797500325	0	1.28475944493375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57793175-4	16.6135587560654	0	1.28593872167015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81352484-4	44.0847233027948	0	1.27684342881122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91183667-4	15.8931964538171	0	1.28207976280103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85389173-4	28.733525285034	0	1.2818525381013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117486302-4	21.4462555802026	0	1.27936341699156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6016567-1	2.13362548486191	0	1.45553479967842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74529349-2	6.76102204600407	0.0930506100145001	0.968679361270949	0.0960592469859311	0.923473517771621	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30389630122695	0.958904680953568
Merged-chr6-134120908-4	18.3662951901216	3.74464462450849	1.01159327516282	3.70172945634279	0.0002141348807523	0.00576549563973623	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.78481374055866
Merged-chr4-138068786-4	25.2162917064623	-1.92234424834178	1.10134559076036	-1.74545053293817	0.0809064759948204	0.529423611176588	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05954461216879	0
Merged-chr9-114743651-2	5.85825212568058	0	1.33182490067956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64794132-4	16.1885844406458	2.42710114342367	1.16369790749349	2.08567973508817	0.0370076432923737	0.29840837346785	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr13-54215974-4	59.9247629892656	-1.33767438448513	0.505029730414279	-2.64870423249701	0.00808010113604721	0.0937837102728491	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62679086370539	1.8763281121661
Merged-chr11-117947157-3	13.1378917084423	0	1.29610219021201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152581355-4	43.5897700748799	0	1.2833076841755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134690399-4	12.1856561567651	2.84338880396191	1.04520572239972	2.72041067421031	0.00652008850200905	0.0798893049054299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.72807534006943
Merged-chr2-70964925-4	29.2311878950351	0	1.27559842909056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49943901-4	14.8657911003834	0	1.28547424402027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106353289-2	4.12988098858916	0	1.36452938928335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138775260-2	7.26848599046677	0	1.36647959078076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143035159-4	20.8799470696034	0	1.28521199965429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92837398-4	38.5113107149796	0	1.2773380801525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51526348-4	41.8507856591341	0	1.28188788493952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28099384-4	25.5001825252271	0	1.2767460362074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55955689-1	2.15888822031903	0	1.56243623420559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132735368-4	21.7097828138151	0	1.2809129743696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13393455-4	36.9673496575343	0	1.27500680248771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148402430-2	4.68044890363336	0	1.42005178054429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52420751-2	7.89636795886381	0	1.33297955433951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63117728-4	29.3299901959783	0	1.27555526156251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104687500-8	61.2045895652674	-0.788735590966688	0.253868038784406	-3.10687235283096	0.00189078022633576	0.0311221472720748	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.29092690533659	5.4647819873481
Merged-chr12-102333289-4	13.0084507453323	1.16418829365476	0.811026257278975	1.43545080471335	0.151158677498388	0.833694711327622	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.928670148753437	1.50690972966086
Merged-chrUn_JH584304-33210-1	1.91201652356088	0	2.08918707618563	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150145243-2	4.62589870250432	0	1.35825455573186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82566295-4	18.5236527213692	0	1.28013583097199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84276811-2	4.77784565685294	0	1.38464102423406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167253693-4	31.3517730044633	0	1.27759236971026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39503391-4	31.0347430269823	0	1.2832389685044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9104145-4	11.9941579328695	0	1.2842543739776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129308028-1	1.94135175330189	0	1.39360673877717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101844201-4	13.9101685192372	0	1.28655422286878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66051797-4	21.5870597043496	0	1.28181487057097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68709500-5	32.5528886756391	0	1.27547365112238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84551665-4	13.8861669895549	0	1.29451866929303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113061192-1	2.35628097707844	0.165251810260091	1.47588405037867	0.111968016876185	0.910848765904296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.950964095041303	0.683637474991079
Merged-chr11-79611156-4	30.7926368200407	0	1.28050961716752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113379120-4	34.8872114236641	0	1.27784257504788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117481894-4	41.4947816658984	0	1.27615889481558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49205593-4	89.7965448517219	0	1.27813409094779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54946726-4	27.9581758576822	0	1.28084402945346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140392859-4	29.3906824850707	0	1.27644710635711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155019868-1	2.73305458078512	0	1.38676879197614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107502222-4	24.9373204106718	0	1.27854834486298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124684742-4	95.1859330090473	0	1.27960611826651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152889982-1	9.57856107357685	-2.10407556499258	0.756249843809283	-2.78224925560871	0.00539835620646543	0.0691010743717317	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03661025123997	2.5281157213591
Merged-chr10-99926767-4	21.2227693653645	0	1.28826724740548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109017331-4	14.2325539578464	0	1.28504308430163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10500930-4	12.0257627224499	0	1.28705743495016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16892109-4	27.2823392437417	0	1.27901585297683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142392379-1	3.3857820419197	0	1.39873912774159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14279422-2	9.21805991918222	0	1.37740314152549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35417754-1	2.38288862083583	0	1.40698022237129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10551053-1	2.49417053402521	0	1.35564361047069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5420200-6	88.2721732105625	0	1.27595500030002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22897369-1	2.77815075829379	0	1.35835753569636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50820362-4	22.0076488815136	0	1.2788814970574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63500580-4	28.6254626243841	0	1.28968326579491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139973094-1	2.87609420371557	0	1.38470126486163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144688427-2	6.03988203599569	0	1.32135521772916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86509608-4	22.3977787607379	0	1.2816867735546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55504308-2	4.55440534629584	0	1.42297442236517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7312870-2	7.02906659699169	0	1.35073596298801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132551942-4	19.7202799234277	0	1.28364828940911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33817700-8	96.9466930709465	0.151311894879855	0.231406342317228	0.653879635988656	0.513189354660051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93933444165978	6.091370595058
Merged-chr2-128364359-4	25.5925952953894	0	1.29840148981839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12370087-4	20.6945250581151	0	1.28056907483779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76765219-4	26.1737758326148	0	1.30366864223298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3658033-4	31.9616047568133	0	1.27483638388169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91476350-4	20.7778064650235	2.62909047957499	0.602831008711685	4.36123962036002	1.29327636888275e-05	0.000620943700227862	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.872977137785575	3.71594332969903
Merged-chr12-32292990-4	16.2151063521602	0	1.28193664500291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31350084-6	56.40360299353	0	1.27683463178391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191093403-2	3.90566083518861	0	1.36179020688398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5935049-4	23.1195628088006	0	1.28867739176344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111127679-1	2.41904334971136	0	1.38407944252348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86229601-4	41.0499713050995	0	1.27499711760282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83600805-4	16.8071756397557	0	1.28369501812711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118663159-4	21.7374086802538	0	1.28248176006492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50099857-2	3.82408107236258	0	1.48198756926137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25484216-4	40.983934589197	0	1.27707179915179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62908063-4	21.2388773333447	0	1.27805318931043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19816438-4	59.9739644894464	0	1.27839231183167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89210284-4	31.2860102415081	0	1.2896934845766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97718662-4	25.7764371296612	0	1.27688002024878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63094438-2	4.75898254000094	0	1.41251310925444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42353387-4	42.3580432873496	0	1.28003936879048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128061616-1	2.01543361334918	0	1.44416870549123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105906610-4	25.5071284923888	0	1.31440130211969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55810420-1	4.17243130113429	0	1.57742897518966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110663051-4	10.3565197928548	0	1.2863472293239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95209530-4	20.0537100939788	0	1.29177919216652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34855203-3	11.7383412172563	0	1.29223911323369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73369153-1	3.46684920053144	0	1.4181460416898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116122901-4	15.871842233871	1.64221312243635	0.585214789787448	2.80617159903427	0.00501339861327227	0.0652990922429518	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83851873286955	3.16176894445096
Merged-chr7-83722655-4	21.8401358723713	0.403958148076019	0.744561118950782	0.54254531668974	0.587442898077706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27934897961144	1.41695929335733
Merged-chr16-49965780-5	31.7373242866358	0	1.27787681094438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125445573-8	139.217106641185	0.180420654686446	0.173268190355316	1.04127973124474	0.297745740831587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.77417064362606	6.93864759270614
Merged-chr3-135516999-2	7.85302662091394	0	1.32393340391354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57727885-4	44.7593201614998	0	1.28013294034994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183905521-2	5.40055560145278	0	1.38207977956643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36987346-4	22.2274152877525	0	1.28972176650474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-15214461-4	23.365865702513	0	1.28530614867082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142550394-2	5.52382528301937	0	1.44332617966979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36857762-4	12.5851334017223	0	1.2828367592838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127478905-4	52.8357568837249	0	1.28427546894169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89733844-2	7.40404244388102	0	1.35297532504343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94456681-4	12.1884023671472	0	1.28333245080603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102094675-4	17.0477111384952	0	1.28439629803273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148918043-8	65.8885403247984	-0.16813736670953	0.206127752346888	-0.815694950316904	0.414674627862625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40724802613768	6.2432323220917
Merged-chr13-5887003-2	3.52743401635762	0	1.39402900789727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167777738-6	134.73388814707	0	1.28042399846531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61469541-4	36.287269970119	0	1.2789299583803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117215923-4	16.0646199929272	0	1.2864435961922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-84079807-2	6.6088313268128	0	2.2656059359922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60356363-4	14.6679508065006	0	1.31861747575047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99784976-4	10.6673140126638	0	1.29359019370198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4240441-1	13.2646259085826	0	1.30783428457381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78217884-4	25.7476585303596	0	1.27989982195747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55649584-4	56.1379063267068	0	1.2816100703423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82900268-8	138.328546072312	1.168911419029	0.213472437213716	5.47570184837844	4.35780898631655e-08	6.19055186999655e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.33026371839797	7.50888085472164
Merged-chrX-107298972-1	2.13638382888429	0	1.3701965722437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17394508-8	67.8814382393946	0.366773977907733	0.190726277097529	1.92303852143133	0.0544752122429243	0.394255977320427	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19504127447557	6.519250212418
Merged-chr8-13674463-4	24.3078629531934	0	1.28218931231036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112012077-1	1.7975154865271	3.15608146433783	1.40879107347253	2.24027644962173	0.0250729811715516	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29606516661881
Merged-chr18-39619503-3	36.3465078323889	0	1.29112455107051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94298620-4	24.7056320132266	0	1.27917843521285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32595368-4	15.8884114848406	0	1.28182507464589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27783288-4	20.2521607958711	0	1.28392637559162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7939855-4	15.4044944795291	0	1.29041141897727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155235447-3	14.7403867458931	0	1.28462319138936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38470705-6	116.696026621361	0	1.27770308359362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9876993-4	41.0451586507751	0	1.27468877379953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148709723-1	1.29120464695334	0	1.8021435082486	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98815060-4	16.4921791745932	0	1.28189834539391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43965138-4	14.3482034751342	0	1.30313917187599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96714295-1	3.04271253376328	0	1.41925140536343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191138920-1	2.54551661860453	0	1.36369101093059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36717692-4	53.3409226415935	0	1.27652450722813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118622073-2	4.64535858980072	0	1.38943398811734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164941228-4	19.7982014874889	0	1.27622547646052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-4817305-1	4.52939021546235	0	1.30794687163981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114806208-4	19.2166602815791	0	1.2828913227134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50470648-2	5.07494115883792	0	1.37165137338028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100085096-4	16.3209072777777	0	1.28150623654123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20782631-2	4.78989205342911	0	1.37466604744873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80772712-4	34.1517145803337	0	1.28273354972487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70001352-8	88.4511130074234	-0.376935494979758	0.227587366961181	-1.65622327817542	0.0976766108154972	0.609625196786006	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10821066450294	5.62698486276448
Merged-chr2-35196408-4	16.8509026865447	0	1.28133655411927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36512402-4	38.9871923812259	0	1.28129405504418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95914242-4	27.1569502437818	0	1.28109928288962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122231373-4	25.0856947462343	0	1.29446097432846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79531995-4	86.6369133621111	0	1.27446291829323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60758550-1	4.10117858529533	0	1.36954974090271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43364288-4	14.2380106926006	0	1.28470021673786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4318350-2	2.60366301908353	0	1.56892806998452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181274897-4	46.0491187775581	0	1.27764662724186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77912065-4	15.269392125504	0	1.28092526785543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52062097-4	16.2728218531656	0	1.29042061528303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87842700-4	10.8188221299553	0	1.28492809643384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39650571-4	23.622220484156	0	1.2811694602257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145276765-4	20.4692513550539	0	1.28176614749547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150835913-1	1.9884105187909	0	1.4514108533658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92865605-4	23.2105807224473	0	1.28266288419654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89280775-4	70.6868316297899	0	1.28071020996466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89801659-4	24.1773200801716	0	1.28909580962427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72254759-4	37.7759807254487	0	1.28055140463751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101977536-4	45.4682056186839	0	1.27803769805709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14133128-4	17.609614127547	0	1.28541693145681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10501018-4	27.0188760471037	0	1.2771830673398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27615604-4	12.4167630125971	0	1.28055817873548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53429447-4	30.3390927462064	-3.78792326042353	0.618873719403795	-6.12067234665047	9.31813355025883e-10	2.3972549408473e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.09170355187489	1.53609721040214
Merged-chr11-11749181-2	5.92536084489146	0	1.36852313844611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18898095-4	36.3736357223381	0	1.27775595195984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55381860-4	43.3321393857429	0	1.2754170327826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17903246-4	17.6286756839986	0	1.30178968552475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9878676-4	27.4942407483273	0	1.28065859176013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25470390-4	18.0732785759738	0	1.27942860002135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57389813-4	23.8967753856954	0	1.27648953005062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93268206-4	14.9440676753871	0	1.28818303911092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80837942-4	18.6262359291839	0	1.28283720017227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44366794-1	2.11421465746637	0	1.49838298303084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-118070338-4	29.668318326172	0	1.28629993017081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125725205-3	48.9504427230543	0	1.27903469042802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39519960-3	8.42794245770264	0	1.29007939653898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33120528-2	4.83311203936428	0	1.30899905235389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61695606-1	5.50794372900317	0	1.67078569062528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3147489-3	20.0156860531731	0	1.29464134170895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76607402-4	22.7188717678063	0	1.28377068057322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117431500-7	73.3567486201432	0	1.27473711607297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115035264-2	5.36318686556786	0	1.31818187611515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159953865-2	4.23240654953122	0	1.43709189262842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21022610-4	13.6752835191551	0	1.28419181828315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54492247-4	25.6047552028121	0	1.28963587717691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117272199-1	2.72051344743149	0	1.44742805784903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40968757-4	54.8512170990324	0	1.27764545642242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54998645-4	12.7844590733675	0	1.28382292512159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91476551-2	6.05842840952418	0	1.29492285575173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142340230-8	64.1302694081875	0.783552676552084	0.230550201708527	3.39862065071055	0.000677265835063793	0.0139259324285962	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47678745433978	6.34157215099616
Merged-chr18-61322737-2	3.19470466863941	0	1.4000089748131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3157640-3	46.8230455521489	4.21129094736136	1.22180597363127	3.4467755423107	0.000567319711877791	0.01212341148802	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.75520908275751
Merged-chr13-105307905-1	4.28537168597182	0	1.41807069662088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112140031-4	26.9767920473623	0	1.28334780342198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7847894-1	2.61240635784985	0	1.3866712508134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113716324-1	1.79206230763923	0	1.50687683330513	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101262672-8	80.4513811654735	0.0797391624148038	0.218324515475473	0.365232288463554	0.714938017922704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76858358766679	5.81473790680736
Merged-chr7-142398161-4	43.5672191218774	0	1.27727889978038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32189302-4	32.5719372822707	0	1.2788811795647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70330249-2	3.66867091947925	0	1.59803388532082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118981174-4	11.1928493226775	0	1.28422639973622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88515388-2	4.80219419023439	0	1.33432541235254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9750044-4	17.46941275261	0	1.28150229489443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49744528-5	54.9609747966099	0	1.27530608982714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49191837-4	24.1196481045844	0	1.28222535698646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58928556-10	126.826038735172	-0.224097477995136	0.156627182484938	-1.43077002624807	0.152496136187582	0.839371000279121	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.10946419979061	6.91402768626253
Merged-chr15-66816649-4	43.3491538562926	0	1.27928234730207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40958335-4	24.1831489462757	0	1.27704126685444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39601720-2	3.30650045758382	-0.435919726706249	1.36536462332893	-0.31926982672469	0.749521911096656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0
Merged-chrUn_JH584304-35963-1	1.71271444397463	0	2.43325287836778	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45974847-4	16.2394852418612	0	1.28720896168328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37143895-6	34.2716877840484	0	1.28641667066264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186585948-1	3.06046927560371	-1.51018617979533	1.36662425327939	-1.10504857218175	0.269138542923223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.867941679574229	0
Merged-chr1-74370097-4	12.8277939634947	0	1.28052227940248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66083516-4	14.0668474850809	0	1.28718739712939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17976089-4	76.5375534176773	0	1.27904225168424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3681788-4	23.5377528133381	0	1.27692108557364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-42984257-3	16.7721998736686	0	1.31028545607548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70798761-4	20.3071977216832	0	1.27904964281862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90897608-4	32.4416980654848	0	1.2809393117682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5419470-4	35.0085704679966	0	1.27350681578892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37203954-4	30.488812328861	0	1.28328323811258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120897690-2	3.1677747429318	0	1.39662329345208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87959539-2	3.63253516707147	0	1.44740961671569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23233610-4	18.8692899206289	0	1.2901276788637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32358806-4	27.196357653515	0	1.2837647841509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5509958-4	57.7388987117111	0	1.27651797861044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57290933-4	29.1279844323221	0	1.28536226072777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86779396-4	22.2873135276739	0	1.27822894347655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70594405-4	13.7556890662999	0	1.29237591371964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117879457-7	86.2022825757063	0	1.27796385482355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34054552-4	15.4980753653708	0	1.28102132652966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-75119646-4	22.7133789535996	0	1.2748266908036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3147066-3	23.5935150683425	0	1.28865126732054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67702918-4	21.0461540444864	0	1.27776291373935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46935055-4	13.2761016329616	0	1.28164555852586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70786077-4	24.2178016698314	0	1.288012626713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11794440-4	27.1323763299602	1.46255469582859	0.892599521104235	1.63853403597984	0.101310339988083	0.626974663970192	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	1.27911570690487
Merged-chr6-145303100-8	95.8179588311423	0.564041722634282	0.195785395929393	2.88091826234933	0.00396518455458619	0.0547105046249977	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.46412614420894	7.07925781719758
Merged-chr8-120104863-4	11.7838075928311	0	1.29172353650179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16470069-4	70.4365343758207	0	1.28050497114971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4586747-4	115.333627087616	0	1.28265142829403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117829061-4	29.4124503785323	0	1.2882578619674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118472693-4	12.264772169074	0	1.32529755040631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58507082-1	3.41001342376701	0	1.32438020030484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3152232-4	19.6395099023091	0	1.29451640840744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38477093-4	25.3456175329848	0	1.27576880612917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8661440-1	11.8627022983326	0.394801584167688	0.599844098067516	0.658173657854762	0.510426549514485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51841757900203	3.13054261945269
Merged-chr6-29245535-2	10.7653063740827	0	1.29473867787245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45625536-4	18.4924906345049	0	1.29532730989966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62750580-4	12.4976409793627	0	1.31980871515937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11496970-4	48.2953770426379	0	1.28388453761413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57730071-4	18.7391147251099	0	1.28411712411604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113654817-1	3.3051050256833	0	1.41179113082957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166459141-4	13.1019512883568	0	1.28710206566982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77856787-4	16.0229998212826	0	1.27709301414453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46152501-4	18.2410165749861	0	1.27664553747083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132084575-2	7.44406170600145	0	1.36104895042573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39651921-8	53.1717018447937	0.00156677022427521	0.202651475741366	0.00773135363827697	0.993831333752107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67472520266282	5.76439195636485
Merged-chr5-21131365-4	48.1368595948903	0	1.27641651058828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125776988-4	33.5661125996828	0	1.27953878857005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166467340-4	21.4166006621082	0	1.29957608446628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115958583-4	21.8052866752124	0	1.28431016502679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57727550-1	9.60222165190715	0	1.29208256100569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83074420-4	27.7565289949486	0	1.27836436108344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38515414-2	8.91253538177471	0	1.30551163837004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106145511-4	10.2799470747305	0	1.30611075548156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74431722-4	52.6201708126093	0	1.27804564973278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3378776-4	25.8112619212169	0	1.27871642380021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80853821-4	24.1917732896479	0	1.2802613851113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5803793-4	46.8952426503668	0	1.27332449820322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99929405-4	28.359890907674	0	1.27803093737849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54494981-1	3.63476763591737	0.0578895017870583	0.800821321478353	0.0722876629710503	0.942372982533573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.434892061918	2.41264002021269
Merged-chr8-60883643-4	15.182114068657	0	1.28854404548289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26813331-2	4.89014633192999	0	1.38553396078056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126758553-4	23.0244549791377	-2.51351799074376	0.390423206129543	-6.43793184237562	1.21112358677612e-10	4.10062600525764e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80946071176477	3.33026084877685
Merged-chr13-49200870-4	74.8280935403341	0	1.281845399352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25285218-1	2.04870345919952	0	1.54803574473608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40212609-4	21.7388635659235	0	1.28317098423451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35016516-2	4.1206848740242	0	1.53366957098756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87659448-4	27.6700618725564	0	1.28033422999194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35153211-3	13.0493176509471	-1.43178362471321	0.4804400270884	-2.98015057860649	0.00288106722064767	0.0431209845626299	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59312313267784	2.76778958584463
Merged-chr1-182489954-4	30.3266497048858	0	1.27928272818484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45252638-4	28.701864519606	0	1.29625902982841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46486903-4	14.5271856077757	0	1.28099122891432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4082988-4	20.2165260510339	0	1.27979241140448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148483461-4	29.1200205949205	0	1.27452802243887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108990629-4	42.1775049400699	0	1.27795887146848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73371750-4	14.7348565315105	0	1.28586858195657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33984649-1	3.24377208580075	2.55790046802609	1.98772858637096	1.28684594343743	0.198147989755826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	1.52572753666912
Merged-chr11-43395098-2	5.74781690576616	0	1.31564748356629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142440695-4	38.5388112596661	0	1.27899918791995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28260072-3	57.6064895461022	0	1.27409314713429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99090101-4	17.538278252758	0	1.28103387413375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16489985-1	1.86843478189932	0	1.42730625647849	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40844381-4	32.6753281364554	0	1.28008189012495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19044065-4	32.0674715640681	0	1.27883002962562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79450374-1	3.11741941280501	0	1.36873392200499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116524742-4	16.7463167055144	0	1.29509360986526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73541029-4	23.5484942117098	0	1.28504024885428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79323603-4	36.1290240670767	0	1.2779368389682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90742251-8	106.57096549554	0.734809718851068	0.166175736606839	4.42188332578047	9.78442904346551e-06	0.000497566770641476	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.15923535134834	6.91542849420914
Merged-chr6-120927091-2	4.31836829788212	0	1.76936609069606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52419449-2	3.62077840609915	2.76737490387115	1.24357078708782	2.22534570014448	0.0260580397467369	0.229664434104763	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03295826569721
Merged-chr1-171380078-4	24.8683955583162	0.790629686135281	1.27960421455321	0.617870492409511	0.536660711297249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.420961122473315
Merged-chr2-13557633-4	19.8270981239041	0	1.2765743177314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114884875-4	23.8180665728796	0	1.28586940981101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20108421-1	4.39546646005128	-0.921127036011678	0.802483345730161	-1.14784567295109	0.251032278785414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52980834093438	1.87744667331019
Merged-chr2-25228708-5	21.8866332063958	0	1.27886226928252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrM-3155-3	543.201755563703	0	1.33463377501149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99200194-8	96.6911579268796	-0.47594272161178	0.193251285161021	-2.46281788612798	0.013784991378841	0.141013470044105	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56216565876297	6.06473722358421
Merged-chr8-111659257-4	24.3780219365997	0	1.28198547809819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58015370-4	48.7343145937639	0	1.27526932333485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27210445-4	18.4892785404736	0	1.28103297560931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120080878-4	24.7395564980241	0	1.27626950605502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33883565-4	16.4099017827169	0	1.28009924220272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53139076-4	55.1580606282087	0	1.27852355863393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47251319-4	17.7153381220055	0	1.27968351757864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35331532-2	3.86348148487899	0	2.043029182068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18954154-8	61.52525934597	0.00732009474784146	0.224482485327276	0.0326087567017507	0.973986586707229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74839795389661	5.68736259258093
Merged-chr1-154034337-4	17.8868912054226	0	1.2807742566389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115522710-4	18.2399702835632	0	1.28354590717214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8829004-1	2.00238989764172	-0.411411581525093	1.51482928220738	-0.271589403741649	0.785937747903615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11698580247857	0.683637474991079
Merged-chr4-122872150-4	18.3321538637607	0	1.28481352970481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88838452-4	11.5968162064186	0	1.29366465962785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134099329-4	65.0781515921197	0	1.2840516092046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69719525-4	40.859115420717	0	1.28827582092584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36932820-4	20.1987710279262	0	1.28500727118617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115468137-1	2.73194965250869	0	1.36562286329971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6291311-4	31.1648017419336	0	1.29680435804234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35568998-4	30.1229682895753	0	1.29258537925311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98324450-2	3.31118671661058	0	1.40733263085467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116603367-4	19.8471047450264	0	1.28111891251735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29854607-4	23.697468512717	0	1.28241940882841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10268641-2	6.08254986148061	0	1.42936077871703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130387448-4	15.6884969777904	0	1.29461306348643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105017622-4	22.5214885376112	0	1.28385529673274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23856600-2	6.70404914871382	0	1.36897212053927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43462348-4	44.1112387838617	0	1.27766739977299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125845461-4	41.5261371403926	0	1.2793839978873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5569274-4	39.7708824115343	0	1.27409843311779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83947761-2	2.45365982245234	0	1.60522903397082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129633425-13	240.803271059368	0.426075588927464	0.142035052039214	2.99979183173624	0.00270164177989468	0.0409609011018556	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.82058647609281	8.23901994458088
Merged-chr6-100211392-4	18.3925790686635	0	1.282859877056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112629492-4	83.8978106173704	0	1.28028668946247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27361525-8	99.3378412913954	-0.0114841766280277	0.237859324156303	-0.0482813808908378	0.961491993143315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8173797812961	5.77257493169637
Merged-chr11-101972249-4	26.7883139636802	0	1.2829016326626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90542884-8	106.862375643139	-2.79968427542585	0.32669849767348	-8.56962702725376	1.03820742651579e-17	3.23060488062385e-14	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.46221093237089	3.70552459427422
Merged-chr2-73496160-4	46.0570256275126	0	1.2836407384502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106352886-1	2.05333056973841	0	1.71660215824242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23993440-4	22.1553739198826	0	1.27992580385687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12578883-2	9.12683256503738	-3.45144069883405	0.640886237009329	-5.38541865860634	7.22762158309178e-08	9.40829003921743e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34735299803696	1.87496859647037
Merged-chr2-117018617-4	19.7216797445286	0	1.28499522863107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107612314-4	18.8938005274961	0	1.27899688581812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90508150-1	2.8625772531593	0	1.41554550345105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63858674-4	14.6867852064293	0	1.28045129942866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59225105-1	3.62074185307675	0	1.37273042008776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88510141-4	78.6763733901746	0	1.2841371717421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114356655-4	37.8282334728427	0	1.27536133221292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7824213-2	6.56205091355339	0	1.31214698430785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53218302-4	32.5637431303079	0	1.27498887254156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37617569-4	20.6196471892701	0	1.28121002291227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84848314-1	1.88727665082784	0	1.6313881943627	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120033266-8	36.9646932170621	-0.339889423697424	0.258651291500933	-1.31408361321172	0.188818068022208	0.977671146859387	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32612781989567	4.86490015235839
Merged-chr14-55794058-4	10.4662392896186	0	1.2837830795028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27954755-3	9.30646342630456	0	1.32390232484001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53748810-4	11.7608729251186	0	1.28836173137922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98783513-4	41.9161723685115	0	1.2777468628218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151601550-4	28.0835366425169	0	1.29532991902299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30099545-1	3.46675512373917	-3.31304903108095	0.983147129775371	-3.36984051597436	0.000752117002304816	0.0151925309528935	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68004238098688	0.851599296279844
Merged-chr4-88537558-4	29.7351654326628	0	1.27858455490816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124626639-4	17.8878914850359	0	1.28398323848767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147748182-4	40.2264454881392	0	1.28294198581352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134173542-4	16.5932970887098	0	1.28130157108033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-2690-1	8.1131455576957	0	1.32698422834298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125637133-2	2.08123751018963	0	1.69615277497245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152599513-4	29.4213333866847	0	1.27693919520474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114258947-4	48.1912763356445	0	1.27478036877635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153168338-4	18.4827396453892	0	1.28948847151947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116457212-4	32.2478613593467	0	1.27856341517005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153120304-4	18.4720698591295	0	1.27738179257236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5362202-4	32.9370052158364	4.19394284343127	0.979075293558434	4.28357540122215	1.83913732378021e-05	0.000824510563152505	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.63767395945907
Merged-chr18-76237529-8	45.4827077307367	0.347759434180618	0.230044742121436	1.51170346678492	0.130609316303725	0.752826707522558	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30720122019998	5.65602322138328
Merged-chr4-58613219-4	13.8550784606666	0	1.28689622454595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164867404-4	28.0748784657943	0	1.28026389710526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45868866-4	27.0061518568818	0	1.27935172687925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84555010-4	19.533513125478	0	1.28387569969909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24707310-2	7.58205038670393	0	1.33212459011363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96459387-4	40.9357378281667	0	1.27512652357311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54245283-2	5.34278247914041	0	1.3326333161635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95951307-4	35.1044357771087	0	1.27940918938684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97933468-4	16.1219664015032	0	1.28847055274539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60624367-1	3.13406164159074	0	1.39735338193352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130787719-4	39.0167478084139	0	1.27534033460248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57769192-4	93.8408086193209	0	1.27533592020655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53217703-4	20.1922674051374	0	1.28398391778486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71974923-4	23.0908855645305	0	1.27835465745263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86593654-4	12.8597032243365	0	1.28871140953195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13835458-4	29.7985346466997	0	1.27515839157934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97966130-1	1.53589336696022	0	1.60345128672217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43471459-4	17.1233918663233	0	1.32103918496129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12270703-4	37.5620646986487	0	1.28532235528353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102895982-4	15.2369997880557	0	1.28059607739643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34448188-2	5.50960272199736	0	1.38686389266095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96623402-4	12.2757410647008	0	1.28812807394927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44436720-4	11.3911425565624	0	1.29012488511788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73031015-4	10.7681375992209	0	1.28771085016568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87679255-2	6.79354279916334	0	1.62366976571189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58640543-4	20.4898772847758	0	1.28075910795399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54727548-4	15.116585283738	0	1.292115176175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4188412-4	12.4489247723635	0	1.28398493407059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107359545-4	17.6538204688081	0	1.28209510120734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5952197-4	30.1929817054596	0	1.28250860049608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102827939-4	25.7084384534675	0	1.27617612848681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134073131-4	15.3977582393423	0	1.28832966652293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99461835-3	17.4503910031972	0	1.27803605141585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25282521-4	30.7278368666677	0	1.27590661122065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9635679-4	17.3553021831369	0	1.29022261891144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104867758-4	21.9874833547683	0	1.28377555080914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75585126-4	34.1122533857963	0	1.27865605062422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153752689-4	14.4103844502197	0	1.28804808005781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60580101-4	23.268396250257	0	1.28156692560738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169123932-4	24.0875098022687	0	1.28192700509438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40073816-4	29.8967979876078	0	1.27466652619944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78651801-1	1.96040064566848	0	1.4247980514553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114045114-4	15.1266313263345	0	1.30477485938395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-85915199-4	33.1469650014015	0	1.27492862750308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31188877-4	39.0459337027399	0	1.27626894030621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103719037-4	13.1558192247319	0	1.28112096503509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122649631-5	40.6033627053422	0	1.27585581016661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44271836-4	21.8381991450996	0	1.27962830394471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172514179-8	94.1580352279674	-0.190970511452942	0.234517495387928	-0.814312429599536	0.415465990907532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82860246961753	5.59574401735184
Merged-chr13-5823413-2	4.9318499093592	0	1.43861770046958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98716190-2	8.41489233921336	0	1.3003447931138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120745454-2	13.0020678167587	0	1.31834240141657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137952451-3	53.9475537751428	0	1.27980617603609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9657246-1	14.9512047640075	0	1.28299274767377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76766476-1	2.75552499147057	0	1.41428951114938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151587500-1	2.77580681147651	0	1.41359505500254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51925772-4	24.8182467793807	0	1.28120226932632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31106761-4	19.6696357061286	0	1.28234002425148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8643250-1	2.29602611964817	0	1.41811946505727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56566205-4	14.5504092755439	0	1.28470735602648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105825834-8	71.1878309437237	0.974238234301738	0.17975950510947	5.4196757701822	5.97072212685084e-08	8.01155663452145e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49579955016258	6.49570940206315
Merged-chr10-26797493-4	30.4407925739563	0	1.27608710324887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93750051-2	2.70871541777708	0	1.37475603311953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124755433-4	19.2089626206309	0	1.27796297700853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101907949-4	53.4996253107973	0	1.28043148434611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68378130-1	3.63951186402506	0	1.42754496541563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12032705-8	63.7529603468988	-0.67254643588363	0.223399265060286	-3.01051319798272	0.0026080661329885	0.0398193199827726	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37181838850885	5.63862906456458
Merged-chr14-8112114-3	24.8510932993516	0	1.29250020557582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118646064-4	26.0825065287126	0	1.27943138719683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142524256-2	3.58702624729466	0	1.56826592335792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63780718-4	25.6264791757872	0	1.2761849992271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17012785-4	19.72455930675	0	1.27938071815743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21567765-4	24.7952930019727	0	1.27987353894315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19784671-4	58.8931490450738	0	1.33996829887691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110943127-4	26.3339835644863	0	1.28180352250436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49301113-2	5.96292781450454	0	1.37025761062279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79214121-1	2.5170093054225	0	1.40438016819544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57774012-4	31.4481194674806	0	1.27527603292852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27374281-4	40.5101586595854	0	1.27899565438033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30690487-4	24.4905155043812	0	1.27998417426317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46447804-3	79.6678483895178	0	1.27912366425787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34782091-1	3.29491081627181	0	1.91743283219534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104146200-1	3.42846139716454	0.760976090373389	1.36931203485065	0.55573607111135	0.578391293942766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.423054662900563
Merged-chr16-93816609-8	136.843718461663	0.845002847315396	0.172911574822704	4.88690735817904	1.02432262959205e-06	8.16285201869785e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68111014741037	7.5094502436335
Merged-chr12-99616392-4	12.5638051409816	0	1.28695331949251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31809968-4	24.4309789913006	0	1.29000342482893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19146424-1	2.01612684113409	0	1.36576223842941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53882727-4	21.5521847442022	0	1.2826925780345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107756449-4	43.3333929990376	0	1.2789499239472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34768576-4	17.6431888164605	0	1.28482619520608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60723365-4	17.4048492379306	0	1.28772790089287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35036352-1	3.26881020315388	0	1.41002316481595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94591761-4	14.5171426312327	0	1.28044246791068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4456611-1	2.99561341281863	3.30281095301446	1.19021441982603	2.77497138162484	0.00552065655489218	0.0703496145155976	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.27911570690487
Merged-chr1-148764886-1	3.31045266718688	0	1.43426236787224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32181976-4	21.6603750245391	0	1.28317179823347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66848957-4	12.7960993973074	0	1.28325141421466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21179338-4	11.6334219736342	0	1.29450314387476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68683487-2	3.22456815872931	0	1.34292204148606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-5015533-2	3.21722074827387	0	1.71318650423343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95849535-2	13.2737354603612	-1.45107262785366	0.714695434729688	-2.03033706015274	0.0423222895807022	0.328923921853065	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0540443707448	1.59982791176663
Merged-chr2-118842008-2	15.2930654022067	-3.06212454132747	0.574294658231186	-5.33197461867178	9.7150520044842e-08	1.20779560914999e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23047625415656	2.08137696679909
Merged-chr4-141273475-4	11.5988015218065	0	1.28015766946692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101257031-4	19.7671767210111	1.56599623997985	0.989214818798074	1.58306993609596	0.113405525042551	0.681371592444884	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	1.19133112147929
Merged-chr3-97204044-4	15.0403055195999	0	1.28120991220128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121574085-2	2.69150644905936	0	1.51369832687354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8910559-4	19.3263671068415	0	1.27785734444909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55040226-4	17.3518007578597	0	1.28060505335801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110711070-4	13.0093438129985	0	1.28348434369699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125603386-4	15.2312175540591	0	1.29199824405243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57335878-4	12.0435567524191	0	1.28328066797191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33933478-2	11.4218707896223	0	1.29933476723909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71287290-4	16.9152389547195	0	1.28098814307521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120940499-1	3.01715320459662	0	1.36507923389586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127657315-1	4.48117026346415	-1.84220471125831	1.0924833193279	-1.68625431497814	0.0917468263250402	0.58078292195918	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78687736278227	1.63657599924846
Merged-chr18-25241810-4	15.1530483177598	0	1.2831013664665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28796792-4	28.4658623386108	0	1.27789797917804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86504240-4	47.7607883321871	0	1.27972026039873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74434762-4	37.0597021462234	0	1.27793513617782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61583098-4	27.3541130174477	0	1.2783861266618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38941234-4	34.209347074657	0	1.27824437831822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87002920-4	19.4114680704372	0	1.28549944967552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19979521-4	19.4008879644876	0	1.29158334726607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141372236-4	56.9225259555335	0	1.27503340616526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72725588-2	7.48561155227456	0	1.63169010917093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-73557240-4	33.3877195089309	0.772724340096899	0.482882147540952	1.60023381280909	0.109546723676682	0.66472654892529	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0618020229702	2.70826009548996
Merged-chr3-118081989-4	21.788365253807	0	1.28172265488584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75985303-4	16.6383966338638	0	1.28346393086505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117019325-4	24.5463608713322	0	1.27785767657501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99090085-4	32.6928686806569	0	1.2883375096941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67244090-4	22.3884580894116	0	1.28523018225937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65663901-4	16.270083135652	0	1.28190322809123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72559002-2	4.81274424320447	0	1.35687450400433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31804589-1	1.60136140412017	0	1.7441137995886	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63109486-4	21.4093666043519	0	1.27599851770984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4663025-4	38.855619516239	0	1.28193446830426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103383375-8	71.6612223704384	-0.25929546482584	0.176552909574772	-1.46865585761432	0.141926156076936	0.797076970402679	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.97232572017808	6.71457071483949
Merged-chr11-3175298-3	17.4958941202323	1.16810824988213	0.902920894459726	1.29369943374838	0.195769261021059	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	1.31734301959449
Merged-chr18-57656262-4	26.8820580593148	0	1.27947000600215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122256861-4	16.2520086341664	0	1.28742329532961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108120886-4	17.166409527002	0	1.28268846213796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70829411-4	24.7237164394516	0	1.28418042882105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65113677-4	35.9546566172235	0	1.27862445168799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116767917-4	25.2464395250789	-0.0741132343613326	0.269771388797126	-0.274726073405314	0.783526697961335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.15536902899129	6.05766941120242
Merged-chr10-37204591-4	13.7180964902409	0	1.28559603843915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13684551-4	24.5321557282549	-3.82786153034471	0.632354963725991	-6.05334305876245	1.41870286724083e-09	3.45919990905669e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74676081649352	1.46894927517136
Merged-chr12-8547470-4	25.5224091719854	0	1.28057208158619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4333187-3	12.0699552833295	0	1.30185168783264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10887659-4	16.6240667221379	0	1.28653219844082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28407650-4	13.0671628656672	0	1.28143554846458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49743773-4	17.8209818370556	0	1.28185301948751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36205612-4	12.5579596143206	0	1.28811601409253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45126584-1	2.38117115555644	0	1.48531682555818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46893125-4	39.1949046205521	0	1.27625213317738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127254236-4	41.1675675295018	0	1.28213025142399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10952592-4	21.4884921039948	0	1.28203122225294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65102850-4	14.8740565434083	0	1.28508377441826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9682692-8	139.209620210858	-0.294810457837584	0.148131476911555	-1.99019454868196	0.0465695085928401	0.352091994505118	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.36838094126707	7.08623839518744
Merged-chr4-53082093-4	21.6998561499963	0	1.28440519733629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120163703-4	35.3063081173408	0	1.27653582987527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123610719-1	1.89849284882718	0	1.45324596769936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53995373-4	54.0800538625247	0	1.28541133405908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179842738-4	29.7732761772089	0	1.27886672393406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120528464-2	5.62302727253815	0	1.32513245388873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13551326-4	21.5441459463161	0	1.278258559534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94687370-4	22.2313503449601	0	1.27906448369718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111103301-4	77.175666948656	0	1.2761651351593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36578694-4	20.0236006125261	0	1.28850984392176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27689623-4	38.5678905245424	0	1.27617884294115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171847197-1	5.12561992573519	0.124689277972678	0.780323568234285	0.159791762095338	0.873045113593322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3840052484688	3.18630051868871
Merged-chr1-16216774-4	16.4553871602065	0	1.28432962730677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69186069-4	30.9586509732935	0	1.27618199853935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79630385-4	43.6714856802428	0	1.27792617767934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6297841-4	77.9082880102734	0	1.28375876484718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29705419-4	21.5235412154927	0	1.28079555132946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94098525-4	33.4660554544089	0	1.27513689642416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62720372-4	24.6318928321015	0	1.27650122271204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180830005-4	35.0231464702594	0	1.27680748212067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22644156-1	2.28600238211153	0	1.44668831489853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77301495-1	2.56802157221261	0	1.47022431478892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51197283-4	41.0005156201722	0	1.2793046947393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50022624-2	10.2242027517984	-3.24611082367221	0.599953032577876	-5.41060824332254	6.28110434484404e-08	8.39355919260079e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15966626682465	1.77338015316878
Merged-chr13-116949717-4	21.4250781901278	0	1.27870008116104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122565600-4	20.5555779851885	0	1.29694370274311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67580002-4	21.0384417565952	0	1.27712474389013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62416911-2	3.49989316327124	0	1.47804884339933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95198074-1	2.66061794774096	0	1.38264839659631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142699477-4	10.0311143102127	0	1.28602374378711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82015310-4	25.1053385680611	0	1.29006079234184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114996738-1	7.20965291938106	1.1658687927733	0.689057944716538	1.69197496627503	0.0906507468478103	0.575615946313965	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92955128122781	2.55270831896051
Merged-chr7-68129204-4	34.4503121642707	0	1.27923097323083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75691796-1	2.70124457173333	0	1.55690628917172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116084213-4	24.3801497020326	0.244815347708099	0.529853685570819	0.462043304359309	0.644050266376382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24668748582349	2.31193049927473
Merged-chr15-78257857-8	89.0541022752333	-0.3742472405639	0.174771894828669	-2.14134681626458	0.032246080377987	0.270936552947963	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.78962633682848	6.36278693344601
Merged-chr3-105047039-4	71.2335186623484	0	1.2762613922787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5207000-4	27.8021947033894	0	1.27781471114016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55840964-4	15.3170490683956	0	1.28138613346628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63827955-1	5.59169006513931	-0.0105682614518137	0.724007156895207	-0.014596901910658	0.988353770907524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91792066482502	2.12616253549792
Merged-chr6-134220488-5	67.295851170495	0	1.27416731869845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151598103-4	41.3238077561406	0	1.28476476660423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50793848-2	7.42508035181724	0	1.34669829883804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140206033-4	17.4122524779576	0	1.2878096102654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35353186-1	4.60293421981743	-0.889359695357261	0.919784906621772	-0.966921384504711	0.333583335489333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90013454770146	1.0023426291647
Merged-chr7-126770992-4	19.9979312154251	0	1.28482735908778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140610339-4	27.4226842267816	0	1.2763085024579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101382417-4	59.5098134794613	0	1.28299139030739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8347604-1	3.42477212041771	0	1.34482568191003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126695535-4	28.3185481121649	0	1.28122429088329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13536879-4	22.8771750093918	0	1.28492023061468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57746448-4	35.7524570010111	0	1.2798902695241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-31834437-4	10.2084510400807	0	1.29688055092796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81196822-2	6.2948001153538	0	1.29911919163718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109251983-4	13.8236066955673	0	1.28839102544482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125649620-4	27.2855006218043	0	1.27792657671331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73618489-5	107.258146396922	0	1.27913467374643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26962664-2	3.29193674907429	0	1.36497718423728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47760227-4	22.9657849584998	0.632611762156445	0.485968235418233	1.30175537422113	0.193000023398281	0.992740831941442	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41518210454833	3.18272394346079
Merged-chr10-12869389-6	39.4468086652603	3.35046793259002	1.03550496808032	3.23558846733621	0.00121392261561073	0.02204696699269	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41959898789419
Merged-chr14-60736749-4	37.2026763187028	0	1.28562045574257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-39324-1	6.84702150719829	0	1.3330492178272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92899884-1	2.08370710608936	0	1.53488660903687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138614685-4	16.9554765872685	0	1.27898656250879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53805952-4	42.0414503667117	0	1.28011652555141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78265210-4	16.1599814410175	0	1.27890139836792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86445069-8	142.348767570449	-0.0547793005168339	0.145953822614275	-0.375319395790023	0.707422942980426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.5753520514867	7.52101910341159
Merged-chr7-113612827-4	28.0652303044958	0	1.27573327731524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90016676-4	17.1378661407381	0	1.2874434330161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120715403-4	17.4648916701546	0	1.28277597118064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149229171-4	37.0832210284723	0	1.28731638684949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86204100-4	36.1133544519831	0	1.27972172460967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60120860-4	20.8294649017944	0	1.27705563370811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77841698-4	21.1739434883718	0	1.28490382863176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54901050-4	12.9257020774349	0	1.29521904092946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45451512-4	19.5839855321518	0	1.27970740508706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20697266-4	19.7521664036347	0	1.27949884593619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10139510-4	29.2346645232835	0	1.2755014632567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33288101-2	7.33034283241828	0	1.40418210518837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7085295-4	20.9530487608655	0	1.28364647990479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59225303-4	12.2832513218928	0	1.28484366330916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85019075-4	37.3308174450598	0	1.27827818505833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124143831-4	16.9498363323809	0	1.28155029836213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138613804-2	3.4732497484545	0	1.38174576997345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94696878-8	99.7553531427155	0.79677439199728	0.16520396638681	4.82297374223878	1.41433595663283e-06	0.000106968978497834	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12090531735952	6.93026422585269
Merged-chr7-92980961-4	15.0885361498913	0	1.28691042354715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88845726-4	21.8844602875273	0	1.28043379370682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37924442-4	25.0077136695023	0	1.27778822920008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87031022-4	31.6630597872732	0	1.28084132912467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42938935-4	18.2667917316054	0	1.27915471045894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47320104-4	16.9049039940991	0	1.28014483708185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24341631-4	23.4207109281403	0	1.28266570952877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78332135-1	4.30491055886993	-2.16590979460233	1.01192414393011	-2.14038750591558	0.0323234633939009	0.271527065038932	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64817765138412	0.581381506691384
Merged-chr9-7825017-4	32.6523584619195	0	1.27438688977106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86886610-4	25.3996051903136	0	1.27515234141926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61705802-4	13.9608435607372	0	1.28557859887795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39021036-4	19.5837153562597	0	1.27759226405701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98898216-4	38.0954465144307	0	1.2765088214374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79370811-4	11.1197642570739	0	1.29350024262756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103108599-1	3.3902008979953	0	1.35560456535774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25464481-4	18.8567591484945	0	1.27745044076314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109414998-4	48.6060010832886	-3.50433146057419	0.419628236067909	-8.35103827476254	6.76654876526359e-17	1.92246476354311e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88379203881874	3.36806638008192
Merged-chr17-67450310-4	12.1268057301677	0	1.29230473524697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53818940-3	23.8101584509972	0	1.30071436862215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120323249-4	21.3387414097222	0	1.27966639799828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68915889-2	5.53013992174472	0	1.7892205306489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118611350-4	24.4107246947897	0	1.28950224247287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143307523-4	16.7336583386856	0	1.28935795845141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32352112-4	20.6020764411601	0	1.28587260394208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100426457-4	32.4541353186976	0	1.2780511464061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26531741-4	24.503512909185	0	1.28257456145875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87561751-8	50.2880010991371	0.637872870456814	0.225977224955851	2.82273078882809	0.00476165366609412	0.0627075817139432	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54327444757677	6.18220977987288
Merged-chr7-35065057-4	28.2545807097074	0	1.27742091259189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95293833-4	56.4809195633539	0	1.27688132012267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39511979-4	14.9502942680314	0	1.28290047082742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3894770-4	28.0250018830735	0	1.27648933929275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46831436-4	19.7632048459315	0	1.27724269478436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117020766-4	20.2204531201425	0	1.29514220216726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24444873-4	17.9761183678224	0	1.2827003303392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101292194-4	23.6594821644213	0	1.2782093621855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16114456-4	40.1187628260558	0	1.27453287784912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62543699-4	102.650326307215	0	1.2790268913493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80442131-1	3.13381361523463	-0.548854215898225	1.02383718519163	-0.536075680622497	0.591906246989221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55315743236371	0.989878296978726
Merged-chr11-115072018-6	57.7202250541515	0	1.27740250795587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53285243-1	2.83851144781864	0	1.36024700558406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127605139-6	98.4594699928315	-0.000802190244642508	0.240402974388586	-0.00333685657044265	0.997337578601669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40347582726215	6.18872920377116
Merged-chr18-20741669-4	22.043460355118	0	1.28576477861735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92433652-6	34.9188522017679	0	1.29380190630187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69778174-4	18.552846669102	0	1.28370705686586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167774992-1	15.1302200564573	0	1.291776283104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75659522-4	13.1064687956383	0	1.28190268395958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44392611-2	4.80407883612603	0	1.3484377154478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22299503-1	2.35070175019591	0	1.3687016494828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53594170-4	20.3359205804393	0	1.27875802216434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32202828-4	29.9326946001957	0	1.28035973586829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59974272-1	3.98878705425284	0	1.37289837858357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170120661-2	6.80024385177796	0	1.38654281977065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112398294-4	36.8151574957667	0	1.27833477604864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38375044-2	6.7276687087512	0	1.45294624120154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51477555-4	24.1794973049377	0	1.27651463568699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99242638-4	16.7116074077683	0	1.28689196341916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46497765-4	15.2537676347547	0	1.28685550220135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76767802-4	25.7691903944005	0	1.28001880206447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71327941-4	19.784763011308	0	1.27885305373154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59366389-4	30.9302276638542	0	1.27854780948451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60172000-2	4.32608213650198	0	1.37023210776012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51718841-4	19.1429827883708	0	1.27956025124078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45277446-4	14.9340190061046	0	1.28240129517763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36875084-4	15.9953645978906	0	1.28245692985155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170436491-4	22.4531116383378	0	1.28202594285438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96595786-1	3.2577292237293	0	1.32895737239822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84235512-4	22.1879770054605	0	1.29774591237266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7232967-8	43.6091736413468	0.104302930710816	0.258968203492404	0.402763464024554	0.687122241337715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40270768461846	5.4626436501091
Merged-chrX-151929591-4	11.7063050591518	0	1.28545741594044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113645015-4	54.7412540060905	0	1.28289423393854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19508220-1	2.19579975956409	0	1.48063127475502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51952592-4	25.0814987866088	0	1.27515788085969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70402596-4	20.8728557632116	0	1.27655795232616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54383407-5	41.8376861943521	1.2984706910567	0.315158485244235	4.12005626328112	3.78779892850718e-05	0.00146111335604779	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63738450689968	4.98262531445404
Merged-chr7-24601139-4	12.0848809236887	0	1.28666308923104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172401262-4	76.3702776097224	0	1.27982585954627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29945466-4	28.7669535522258	0	1.27464757298584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58475032-4	21.0992161030979	0	1.28386443569048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128082783-1	1.76263312076561	0	1.69983867866785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10663967-4	43.203800349475	0	1.27823792092955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73942409-3	14.6602354274839	0	1.28434221635631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8983478-4	19.2888455074601	0	1.28423171229334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72350221-3	15.6004653469367	0.40204853577215	0.488996049228005	0.822191787452839	0.410967752092222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98427031231439	2.80345337275093
Merged-chr1-86492908-4	14.1931702590674	0	1.28759881480835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67334470-1	3.10755759852768	0	1.37531922427912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55368595-4	16.3146353336359	0	1.28054797006009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91999748-2	5.14591304689828	-3.36589971471149	1.11363186983484	-3.02245275650262	0.002507352176118	0.0386427913444827	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69328808163529	0.683637474991079
Merged-chr1-40295017-4	44.5111333061249	0	1.27582233060571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50291889-4	11.0671152467438	0	1.28580135601645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119785298-1	3.40751790984211	0	1.4111552692807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59364496-1	2.13536624760748	0	1.57088433141755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7601128-1	1.82672777736824	0	1.41245262424272	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45056018-2	5.69843344188776	0	1.38465228267736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103569989-4	20.9892570912517	0	1.28568712598229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5042685-1	2.04660726699532	0	1.40742006717891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75541155-4	27.1842031665103	0	1.27908333922447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6569274-4	65.9212518954465	0	1.2799604478679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103774868-2	10.1688408133054	0	1.3341460049136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27199457-2	3.43516646500087	0	1.51943036052471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110436937-4	15.8587138192154	0	1.28322165545605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95945346-1	2.48967944455665	0	1.5169831502909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118666254-4	61.210535790448	0	1.28108033125755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111544100-4	54.7933191404443	0	1.27679361463514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91172402-4	18.4018931567576	0	1.28361321513863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83038864-4	25.233378738973	0	1.27818590951544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103323572-4	12.8128808011319	0	1.28205006785688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21406120-1	1.25083832226264	0	1.67741212280495	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122301530-4	37.8512277017705	0	1.27892353508366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96709936-4	78.1512584208834	0	1.28200118103225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85730040-2	2.86192660680651	0	1.40914566202617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56465526-4	37.4531697857871	0	1.27710810022844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58745662-4	28.6981105547525	0	1.27518622072487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40324464-4	84.7430294874001	0	1.27648782290353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43880785-4	25.8501288213723	0	1.28550070619977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55553555-4	14.3013236284425	0	1.28489752159024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17653551-2	4.62121752331025	0	1.35920066152313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122009703-4	34.9157215180736	0	1.28602609783947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46792857-4	17.3939117257072	0	1.28364688587558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9129038-4	60.5424771334988	0	1.27624773915203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74017848-4	14.7719922458754	0	1.28295705527305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124818048-4	15.1071707826169	0	1.28289929056853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90234672-4	17.2232457167792	0	1.29290069587563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91522225-4	30.8571098411419	0	1.27574461465597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82796287-4	14.0372332120217	0	1.27877858613968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30856108-4	16.6194124922019	0	1.28420056768844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118404574-4	66.2237083302741	0	1.28126730101261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20133976-4	20.2103207200415	0	1.27820077571115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76183742-2	2.83509834220629	0	1.47343481435509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69331363-4	11.3322789658629	0	1.28368375252788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104223371-4	34.0202200125859	-4.17131277347761	0.5797563983202	-7.19494047079716	6.24880222828525e-13	4.53704700455031e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.36897724277867	1.62128842389662
Merged-chr5-143818182-1	3.67608973749506	0	1.35734395002268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51333467-4	31.3375339915882	0	1.27544461788236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137848556-4	27.0681909301401	0	1.28584623209714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102684890-4	15.6551732318443	0	1.2807217549452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102739048-4	18.5850136855843	0	1.31786933782328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137336658-1	1.68704741748965	0	1.54584709572569	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3334257-1	2.38745064200966	0	2.3978571892513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31596693-4	38.0378392052626	0	1.28151549672443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116914186-4	27.0082543766282	0	1.27832049346215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17584649-1	5.20255600746489	0	1.37695716247088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4798585-4	28.4488256265735	0	1.27915848055075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75084005-4	47.5110755441866	0	1.28201147460862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140844609-2	4.81301532522863	0	1.3306802044294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105502577-4	30.5016237046102	0.127761360185147	0.62093906273507	0.205755069784774	0.83698223929885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34925959344373	1.628416560482
Merged-chr3-19460837-1	4.60975351546917	1.7054949453593	0.847229852754098	2.01302508382493	0.0441119905598926	0.339282266375558	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63235104680335	3.21017871366514
Merged-chr14-7997364-4	17.690558324136	0	1.28206816341511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8995675-4	15.462655946196	0	1.28238005737401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123335099-8	100.11249538335	-0.812794329838928	0.158415443776661	-5.13077709130955	2.88548453082711e-07	2.97972024656884e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.58328403953536	6.78984326955138
Merged-chr11-115139067-4	40.3813195374698	0	1.27692023640789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32706825-2	5.12625848294067	2.06984938511047	1.68145633465062	1.23098610558957	0.218328060980087	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr4-145267943-4	39.6154944727696	0	1.28905503806712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148804067-4	43.3664777924873	0	1.27957563924589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38396313-4	43.7280161978451	0	1.28245109947057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26140235-8	64.7718582967738	-0.434952055879289	0.20237462093468	-2.14924210293976	0.0316152133668769	0.266502545494316	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.09584121440791	5.6605225302481
Merged-chr10-122687019-2	6.57229242214598	-1.87859536372751	0.984233433730801	-1.90868883269548	0.0563022446150566	0.404892575879807	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18853569849505	0.73596151290311
Merged-chr3-116085671-1	1.7134560585535	0	1.53922374034636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-81454688-4	19.0331702190196	0	1.28217840005549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34451153-1	2.51179888199783	0	1.48075786656109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4066394-2	10.8167223559732	0	1.30308261885623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74493334-4	22.9716664126066	0	1.28549393752373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13208152-4	20.1447082893625	0	1.28568078956703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112344518-8	103.346375200966	-0.129886072100107	0.164632937364231	-0.78894341666728	0.430145078464326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.87586490210973	6.6930889814188
Merged-chr11-3159531-1	9.70925708526362	0	1.31869933360553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124025353-4	19.141423007848	0	1.27975071985891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3490578-4	21.9590714336826	0	1.27877525146778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93028845-4	36.9203673586278	0	1.28063192550914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110970345-4	42.4682555508154	0	1.27776681946594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37232063-4	55.8721186611142	0	1.2797035753086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172636463-1	3.68427780853449	0	1.35858217419606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131698341-4	57.208633984636	0	1.27775424093768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92847963-4	20.5740017168868	0	1.28476112756821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9490705-4	23.7941426490866	0	1.28337288603177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155059683-4	29.9543195548673	0	1.2811766126288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81845897-8	168.338005176417	-0.28442449324774	0.172407026972283	-1.64972680199088	0.0989988258101385	0.616053449327617	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.31735129752812	7.03748087209854
Merged-chr1-128705373-9	104.288624021495	0.956203922785406	0.195612400716085	4.88825820492463	1.01732046143991e-06	8.12444276374611e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49343494088527	6.47838354483454
Merged-chr14-60444385-4	16.962665260239	0.94183197657842	0.895176157589345	1.05211914838608	0.29274488791145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800023534112536	1.19380919831911
Merged-chr12-69447445-4	31.5454092998166	2.44923866014981	1.15421775337295	2.12199011234444	0.0338385683701667	0.280448608528708	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr19-32292641-4	11.6882933833751	0	1.28802411457499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55362170-2	6.02553657684817	0	1.37820293022251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87122075-4	13.0189431480686	0	1.29076431232368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34539201-2	4.20775402914615	0	1.33410545741855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88128356-1	6.18865767128833	0	1.33861155855926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9873624-4	58.849709151435	0	1.28068901592068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120137595-4	13.3653500248972	0	1.27986980758608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72195308-4	18.9436635228668	0	1.27811477441931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73541742-4	14.0136864358707	0	1.27908123136352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24133349-4	15.3666492023457	0	1.27984331722568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56749602-4	13.7076039261637	0	1.2860601742006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63716322-4	34.8972159618854	0	1.27803711573657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63864420-1	2.58559938084323	0	1.4012438452607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-39846575-4	74.3979978772629	0	1.31796570790553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72581192-4	25.220718380568	4.17128784599968	0.969363360690915	4.30312101235865	1.68408805319178e-05	0.00076903157179504	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.67113172082159
Merged-chr15-67413800-2	5.82314227524897	0	1.33975463023656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101766804-4	16.9298998492715	0	1.2825666351994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41801531-3	5.89334970405247	0	1.37414627250261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132529515-4	18.1148006530948	0	1.28889166884977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57589407-4	33.7243888170225	0	1.28370108785336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10859467-4	11.224561748857	0	1.28667768384606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85359322-4	24.031654246463	0	1.27910703548345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34995457-4	15.7158354511159	0	1.27812792144996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12012449-4	18.1295184480199	0	1.27844252290769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148918583-4	64.548075697891	0.386770306017635	0.394648206128023	0.9800381707352	0.327067277208377	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40123755550455	3.59102064112776
Merged-chr5-16356049-4	26.5965567482607	0	1.28121290453838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12841656-1	5.10049566971844	-2.2491598865473	1.21359289452189	-1.85330673630335	0.0638384062037671	0.444021766023562	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.933762630890042	0
Merged-chr16-10498327-4	26.5084172331672	0	1.302021411517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27577140-4	14.8001806248283	0	1.28052768712502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83328214-4	15.2964334525261	0	1.28410813386657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105595723-4	16.2585052485423	0	1.27761919100376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-49074923-1	4.95098148441538	0.102605510462894	1.33541458366069	0.0768341994451097	0.938755443921268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr4-141269254-4	31.5992894460041	0	1.28054362327206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77084269-4	46.1727885299092	0	1.27587421036881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103890981-4	19.6426595530719	0	1.28211135292658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117852619-4	18.1794039028027	0	1.2899271258079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102835439-7	59.7820755803953	0	1.27384481831405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79071796-2	3.94196911904216	0	1.45914694306545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162625081-4	38.8158947180806	-0.5451310848409	0.243805571551798	-2.23592546048556	0.025356654224522	0.22490279409295	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12466717765208	5.59945392457258
Merged-chr9-64089271-4	23.0276328080493	0	1.27924858102049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75164557-4	25.6977114976891	0	1.27809322654012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140794242-8	48.0871976844641	0	1.27878252123016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96502190-4	20.5725534755045	0	1.28189695482724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76579971-1	2.60107448465069	0	1.35784776171112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116588157-2	4.57072463600276	0	1.38076460802256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46443286-4	14.4925400543116	0	1.287581832841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96633796-4	27.5532470979574	0	1.28148363525622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51988324-2	5.65385475725802	0	1.39910145458842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70789478-4	14.2271474417717	0	1.28558619063921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61265534-4	35.0667560622553	0	1.27758089177845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145110818-8	108.612067241398	-0.511819351707533	0.177794492185529	-2.87871320093228	0.003993012797632	0.054945588742655	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.01635234171634	6.51075505638028
Merged-chr2-69802975-8	59.3732570998585	-1.40667959263681	0.237904114512842	-5.91280060673719	3.36339244291443e-09	7.0670174461314e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24154172327632	4.79507956873204
Merged-chr8-122407823-4	28.0139231636925	0	1.29015160225682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17688904-8	54.0927104060147	0.556001863651286	0.221145564136155	2.51418953766112	0.0119306295365088	0.126705496130782	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37488043278544	5.93235762055301
Merged-chr10-24635543-4	48.4363549171546	0	1.27526632871942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91765336-4	28.7312132010678	0	1.27879493023962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87304549-4	42.1324307080541	0	1.274546259119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-77335745-1	4.01980584150124	0	1.37174458949259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50252858-4	22.5104707288539	0	1.28684702745833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117960116-4	58.6969833245349	0	1.28149947562069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80092632-4	17.6769290124731	0	1.28049108819946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108836421-4	35.5896060471867	0	1.28289093148182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167753455-1	5.90831404852656	0	1.31186952903505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88142197-2	5.89976724122446	0	2.20297227853393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12949673-8	134.671087970826	0.706427724486659	0.204611402302044	3.45253351738356	0.000555348477230417	0.0119217482237512	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03147280133056	6.73685909569358
Merged-chr4-129032860-4	26.71235921962	0	1.29291163964793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131106155-6	32.179333983127	-1.22033890457717	0.283506537803004	-4.30444713562522	1.6740325851815e-05	0.000764974358820073	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2776320462801	5.1179262682702
Merged-chr18-46404822-4	48.208767686139	0	1.27749280972661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83634703-3	8.45821958059137	0	1.32479787327101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117996897-8	96.1895250419332	0.203469804458874	0.150878023995858	1.34857150876034	0.177474637181909	0.934509076655038	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.93639465816242	7.13841154684913
Merged-chr9-78533473-4	26.8592355282216	0	1.27713035909321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94226215-1	2.76952542843105	0	1.50261271859804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114879849-4	20.9266429515436	0	1.27768372241807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33345208-4	13.4217386420089	0	1.28672862221529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46791819-1	4.37028077425511	0	1.31060946888717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44011590-4	14.6716348248185	0	1.27975315093659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52624300-4	15.8804125780724	0	1.28363784841218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3981525-4	33.131696232472	0	1.28073431001236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94138662-2	4.14500496828073	0	1.40694587574715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134066299-4	22.2295908346258	0	1.27773504618665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43642790-4	21.2784624018093	0	1.28277095146841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16216426-4	30.8390065823548	0	1.27702529275036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44927199-4	96.9996818375725	0	1.2829403314268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57423145-4	36.9082708922045	2.28849154386543	0.612548878582365	3.73601458411243	0.000186959829686801	0.00518331651706138	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37580656090278	3.31443673173493
Merged-chr1-165675330-4	55.550292917871	0	1.28156834696721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77442645-4	33.4495087981437	0	1.27594282239465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38763719-4	19.9889459980078	0	1.2896007005332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16323161-4	23.3865884720146	1.32681899285068	1.28314357969037	1.03403782230735	0.301118481887807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr8-128435971-1	5.93900946697931	1.83118984198685	0.891417848083826	2.05424408533343	0.0399520735038883	0.316028107394393	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14243070658662	2.70287015972834
Merged-chr15-100041819-2	10.7955263759712	0	1.29149922371422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80326195-4	21.0276426971427	0	1.29037031351845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103234765-4	20.1657780050688	0	1.28179305307261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-55090-1	3.15740888910562	0	2.43325239399516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36234644-4	27.1392860601525	0	1.28204748146073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59265824-4	28.6360822593339	0	1.27867415171904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16088593-3	57.2473432311307	0	1.27575336547443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52513054-4	28.3649142271131	0	1.2850932460351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35445695-1	2.38164744013741	0	1.46739758836926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37715370-1	3.37365864323267	0	1.97825919104904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47314098-4	39.7596881895431	0	1.28232288623766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125370234-4	61.4039935815236	0	1.27798149732654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87830836-4	27.6027745534612	0	1.27910016873335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13511297-1	2.51892733514597	0	1.47092440718605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69441012-1	1.62451744792169	0	1.72919186663852	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32637493-4	31.0424220524697	0	1.27556928540512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95799829-4	19.019302578861	0	1.27983763449899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91041769-4	53.809152328851	0	1.27908774502525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82825686-4	30.7104607094923	0	1.28679692520754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16215536-4	53.9347265006787	0	1.27893197935997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73818956-2	3.58418031211795	0	1.54904349962603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27194126-4	40.8875545654604	0	1.27583112828914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112866693-4	23.4800407278837	0	1.30550213935263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41768567-4	10.6969864098149	0	1.28696352357991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3711333-1	2.21758822941093	0	1.52482181511448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191849649-8	129.256594001676	0.411098742078811	0.167814456318806	2.44972186006326	0.0142966603521479	0.144662367199049	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.76866760712078	7.16534135592652
Merged-chr12-86800935-4	21.2863699887697	0	1.27851787896642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32173960-1	3.74969269430752	0	1.37328666338434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60852219-1	3.73292691089475	0	1.32570987033286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103486857-4	15.9016302020774	0	1.29504693017318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106408105-4	28.1288082149405	0	1.2771124365612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110503583-4	33.6540420297265	0	1.27656721190077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30729997-1	2.49766708976129	0	1.46160360906431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85366597-4	38.4670839382863	0	1.28385728485694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52090407-4	24.3968274565838	0	1.27706590075485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93780827-4	14.1948937152641	0	1.28100014060975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78137342-4	25.1491008599801	0	1.28989706445803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107402289-4	12.2673004231991	0	1.28496167195263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69089329-4	68.3601089753593	0	1.27882672279359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43767902-4	21.6165905948214	0	1.28210203097475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70803722-4	29.6647086633197	0	1.27638066280732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5952608-2	6.48956437297343	0	1.30889321075132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-65446-1	2.69163449082898	0	2.43325249647762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28027114-4	12.7724007468226	0	1.2952966665509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49929515-4	13.9475972761436	0	1.2870633273446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90383850-4	17.9468081991135	0	1.29184747628266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10982325-4	14.1608834204664	0	1.2872608439923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139295822-4	19.7163828104839	0	1.27849351605024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84639484-5	65.7523329747944	0	1.28060866783149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32881817-2	2.98662457147086	0	1.43465089635443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82762832-4	22.3770711401649	0	1.28462324921509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9913990-4	29.2170956827838	0	1.27524496135705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58408191-1	2.879563058909	0	1.35782328147878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55483160-2	5.36910259965356	0	1.49010218714263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19277026-4	32.1954708577156	0	1.28977822087999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123032916-4	16.8140910683147	0	1.29523937566104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70978470-4	38.4544971908514	0	1.27624011533501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86201202-5	44.4167831184863	0	1.27621712912138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117050967-4	19.8016203167625	0	1.28055248436498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118879300-4	30.6597641968224	0	1.28422739481065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87130845-3	9.76190447952845	0	1.29907850582129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111540174-4	61.8021774164081	0	1.27833206859838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-37165424-4	16.7786718575195	0	1.28786489982028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109191138-4	26.6550485217543	0	1.28601589006864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4257724-4	20.0801516835849	0	1.28410931265445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38753693-4	15.8295825377119	0	1.28120126182263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66356375-4	18.7597083219282	0.794909626813938	0.547348880663392	1.4522905863085	0.146420823875412	0.81485395647783	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04510312679751	2.55093367249462
Merged-chr19-36006475-2	5.63058986530919	0	1.36003628441889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38377031-4	26.2082015522124	0	1.28816371571312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112018750-1	2.3349390482679	0	1.64872996626789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11728128-2	4.01387022016255	0	1.46388577938277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24766236-2	4.14179246152232	0	1.37867112863185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23882683-2	6.26200818623177	0	1.30231366561902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30778489-4	24.2131589683565	0	1.28048633947278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136147025-4	16.8550721308182	0	1.2773103234882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20803233-4	14.6439658555784	0	1.29615052467401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82812534-4	19.6492750522022	0	1.27923670249004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67271858-4	19.5116721608649	0	1.27725203928376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37959480-4	21.0587900962446	0	1.27914790249346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90043064-4	24.749566417899	0	1.28936117549543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116972757-4	14.1915138468917	0	1.29975632590583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110164959-4	22.3635715859736	0	1.28805129305663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72014743-1	2.30909062575425	0	1.42955172232436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106785296-4	29.5949252161381	0	1.27650149448133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117417173-4	33.7416730245635	0	1.27732834157859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13946696-4	39.1914613262433	0	1.27961607929861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34953875-2	3.4041932680831	0	1.64485901300876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15726635-4	26.1911426179387	0	1.27987932939726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173680353-2	6.90049622603002	0	1.63340603833175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165987450-4	12.8930736037485	0	1.29107549182618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50842059-4	39.9632952446568	0	1.27534533363235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8334648-4	12.3757817640556	0	1.28218263256486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99354073-4	19.3813473128792	0	1.28090974316501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-26365616-4	14.3527081558636	0	1.28708129850927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103443950-4	15.3201331968746	0	1.2967387633569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148489105-4	18.6783870298405	0	1.27729692125521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134262171-4	51.9004608353915	0	1.28346401411895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92267390-1	3.07736716581227	1.955237500464	1.34145333403299	1.45755163512525	0.144964169011522	0.808192866498328	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr10-85194703-4	9.45069298422581	0	1.28578434230028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33245105-4	15.4312102681739	0	1.27880088354589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54812903-4	22.8281144013365	0	1.28197948247544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8890241-1	2.00572394041279	0	1.47681099748897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66223798-4	51.0714143493273	0	1.27625310189393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128204232-2	4.35238479397139	0	1.32089919909105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67500149-1	2.8569836817517	0	1.47748285164884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39714187-4	17.9502441093118	0	1.29046763972426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13361855-4	55.9201967775932	0	1.27508997240011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31413905-4	21.7742154367031	0	1.27709047005735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32358598-4	15.5751013954385	0	1.28601672833243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167376314-4	27.45544869805	0	1.27912207967754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68712709-2	3.87744865736685	0	1.33638516771545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35557055-4	12.917395571091	-0.414162750562847	1.26459336760257	-0.327506660380498	0.743284706235758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr15-84351496-4	24.4980066740843	0	1.29777588081631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10431033-1	3.17203492645702	0	1.40940234355485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14932076-1	3.23717067616492	0	1.4076738818712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39420999-4	47.1130170859199	0	1.27615735591053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144204897-4	15.822956808471	0	1.2818081455347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83645211-4	22.8709898230399	0	1.28705157809434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50087924-4	19.6329850687219	0	1.29000823981339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47232342-8	81.6604348178841	0.671488276409363	0.206588139825941	3.25037186052946	0.00115254195055544	0.021197299831409	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81858479882843	6.50460984567132
Merged-chr1-106375206-4	19.316408450277	0	1.2767360727492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92118025-4	20.9225370677437	0	1.27615716982622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70643803-4	19.4048779164903	0	1.28629755131261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81480942-4	13.528647733675	0	1.28710979980121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117946705-4	45.009024125406	0	1.28311609125994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165949842-4	21.7119108539207	0	1.27623700148932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85381837-4	24.3756608797121	0	1.27666554589155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37276097-4	20.7498201664914	0	1.28500945738825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57013437-2	7.47058912191835	0	1.34676739577712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37633155-4	17.6496672255292	0	1.28353034420574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170897101-4	22.3207799641231	0	1.2762563611185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58469833-2	5.11925049709436	0	1.44105027304806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45058477-1	2.94836221233053	0	1.33327075775591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114915205-4	21.4714773277183	0	1.28772700775797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12250046-4	64.708217669167	0	1.28156724380703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-24589211-4	37.6078103000283	0	1.27838300564611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99339880-4	73.6514232640906	0	1.27975111136972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127080086-4	18.5191833323407	0	1.27703526964289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53081094-2	7.83022419117003	0	1.34606020308419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52699257-4	14.3533069220423	0	1.28291547048939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97751240-4	39.7311389061669	0	1.27693929378612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88129135-3	26.7584176515877	-0.132502581244217	0.272730203288451	-0.485837577380736	0.627082329321291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71600005128098	5.5536431213215
Merged-chr11-97415514-4	16.1223531121468	0	1.29046613116709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105980993-4	35.2385501241807	0	1.2750782505483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78790193-1	3.78055746259662	0	1.39337971031389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86576176-4	12.5697934440095	0	1.29403668336902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191443741-3	11.630751527232	0.0623462546106286	0.687831281106264	0.090641784290989	0.927777229504836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74542347050229	1.93994840877528
Merged-chr4-123921303-4	31.3976155190283	0	1.27613209407627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28600979-4	28.0019822806423	0	1.28123912358715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94356920-4	29.3299804557765	0	1.28432584661573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38423563-4	15.3884851019592	0	1.28212933984071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93340834-4	32.2190674779837	0	1.27799415466638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21017309-4	14.5238417151492	0	1.29155976726287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98792533-4	16.8440774466005	0	1.28027275280617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100609022-4	19.9420657037166	0	1.28083049564047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-31661-1	14.488419930359	0	2.43325097552219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120127705-1	2.5999432625167	0	1.37059848305858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49000993-4	20.3681715248473	0	1.28433650376712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33782141-4	23.1598342928543	0	1.27557195195907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86690440-8	80.1001282969136	0.268261819093127	0.231528892576681	1.15865374773596	0.246597351028648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6591075479143	5.92284089709123
Merged-chr6-113330762-4	15.5294149371149	0	1.28743132810986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5159538-4	17.3175455089	0	1.2820503609725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5442911-1	2.18346180909459	0	1.39134643566307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59799617-2	7.98774129896597	0	1.33879980000597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98754221-4	20.736242595596	0	1.2998840113261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95530003-4	18.181788186066	0	1.27880269447705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69861595-4	11.0868225828265	0	1.28460654453319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22814166-4	22.664362610162	0	1.27626524428948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9131820-4	37.7218321714442	0	1.2796201886953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108387365-4	14.0735461653027	0	1.28205815024766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12445200-4	18.0404211111127	0	1.28109627804663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5189853-4	42.0136938254034	0	1.27781089897738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39967892-1	1.66701408281175	0	1.50273068757804	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115623723-1	1.94750402209192	0	1.47575771208103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90023103-4	50.1534384079325	0	1.28078871627755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88257204-1	4.61361692017824	0	1.34403231270284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65536265-4	40.844392939716	0	1.28177544724956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5793983-8	80.8047669143427	0.327749374699947	0.190135790503842	1.72376475692158	0.0847503193145058	0.547296606969631	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.46827173249185	6.80161670158034
Merged-chr1-180972369-4	15.1951402130257	0	1.28885052467188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43654707-4	18.702732932276	0	1.27772281024788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80202780-1	2.86925132329364	0	1.35021086693571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23418388-7	39.2906920918664	0	1.27563274164094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146222160-4	35.668607095275	0	1.27706221284888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3147985-1	4.09115440985586	0	1.33307276399632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32528293-4	31.4114064333172	0	1.27416986307067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6877117-3	12.6353126131204	0	1.31362427311656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95745239-4	32.62448397138	0	1.2761569856339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89164919-2	3.50459840601835	0	1.42018253508485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51460826-2	5.01303930462128	0	1.39255950468534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121269556-4	42.0961381772053	0	1.27818201960001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75089773-8	75.6194728917476	0.722281295015982	0.178829359327545	4.03894135578179	5.36929860497913e-05	0.0019235865495667	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05931577699739	6.78771734704345
Merged-chr18-88820300-4	30.3700877876051	0	1.2847158826831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144248426-4	20.077919667027	0.0162917850065563	0.853739114073139	0.0190828611902636	0.984775003730539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23172330808469	1.10669213789164
Merged-chr13-101664166-4	30.2072061809459	0	1.27712842562167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-26220010-2	11.0668278088113	0	1.28794216997426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85468861-4	54.738713564801	0	1.27724263191295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51455985-4	31.2435592935051	0	1.27892728144675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167949387-4	27.4994591215513	0	1.28210324184721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167885805-4	18.0682744856264	0	1.29027877417661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144981301-4	21.52624587823	0	1.28960208703388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184728889-4	24.2650789372566	0	1.28777034600043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39171883-4	17.0611247971396	0	1.28316261664064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77375159-2	13.6891361446019	0	1.35753899724294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28389263-1	1.80607636602973	0	1.53145355932166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122924425-4	17.3775345205069	0	1.28902295753909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81983741-4	19.7689482975262	0	1.27709222028392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85706124-2	7.43894161623905	0	1.33814299971847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97772315-4	78.9176171218446	0	1.27943922485366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3739601-1	3.38642647660625	0	1.39873699218375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129500893-8	162.974126600529	-0.20327502391124	0.222547885972545	-0.913399033304308	0.361032713812558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.68471810867767	7.48844848914478
Merged-chr8-103577350-4	49.5784599585869	0	1.28239161043128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80402165-4	15.207571617079	0	1.28821650252812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34319410-2	4.56421271188459	0	1.41850348581134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103249711-4	16.8497070722874	0	1.2836505490805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17018086-4	32.1825797989943	1.27993576017923	0.622417761466645	2.0563933734205	0.0397446145158152	0.315078418709096	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64819834231029	6.71573924321118
Merged-chr4-99336328-2	6.73908990020048	4.93854057532897	1.09971588821762	4.49074222555169	7.09754072161843e-06	0.000384397227831953	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.67810954354252
Merged-chr10-25126239-2	5.11621731366703	0	1.35392622983431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71193210-1	2.40923082057336	0	1.52605612942323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5939545-4	24.7785582348347	0	1.2811275046837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118507327-4	18.9278992521653	0	1.27865856310335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102724738-4	20.9186421731548	-5.28472427281408	0.829183484792809	-6.37340753854328	1.84873753063898e-10	5.86444673189975e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86173945431485	0.581381506691384
Merged-chr13-37874694-2	3.4799195498957	0	1.41335976172997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52434239-2	3.11344194492394	0	1.39031232492446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34906993-4	44.3180978479911	0	1.27846920727553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13383720-4	18.5898214355679	0	1.28323868820766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23272329-4	41.032255711535	0	1.27639145446866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70258026-1	3.41649886910795	0	1.36939867253866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44030398-1	2.23559083873959	0	1.36636623756123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43915367-4	21.4687166208025	0	1.28318638332177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94544802-7	31.2617184292543	0	1.27882120384003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110424354-4	22.5388261422874	0	1.28134537494225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75363417-4	29.1417903789198	0	1.28041171493779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128779637-4	54.6374820907772	0	1.27799592029562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34331486-1	1.91613066287986	2.41974803031857	1.43417695031358	1.68720326302099	0.0915642741978816	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.918668513615376
Merged-chr17-4908347-4	28.8102457721203	0	1.2806504205626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-27098198-1	2.42610088364932	0	1.50436985070997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89255642-2	3.20540022056597	0	1.40449095498426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14234235-4	20.0306371424619	0	1.28670682755566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85354535-2	11.9997363217757	0	1.28968241442249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101050926-4	36.5483207540205	0	1.28016629839683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75222759-4	113.659319820739	0	1.28109879931381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46932056-2	9.72244256194751	0	1.32736653637539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123190219-1	2.56643274275953	0	1.53574065991013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137688302-2	7.40232421607087	0	1.34508233181663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96857266-1	2.74046988264748	-0.378137116778139	1.34323719187918	-0.281511797815194	0.778317880475222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.796855916231748	0.61242769162773
Merged-chr3-126744586-2	6.8883704475067	-1.83578964696054	1.18154980036491	-1.55371330636557	0.120252817637502	0.711585676115205	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05701419036887	0
Merged-chr9-102521557-4	20.1101254677942	0	1.2821268302458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53158839-4	11.8418726681264	0	1.28301971510095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171055410-2	4.43102299027341	0	1.38037661045221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44130648-4	18.5175941111996	0	1.28747314066408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117405471-4	20.6127098979758	0	1.280547178274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52967682-1	3.11109611744911	0	1.36061284909067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41615612-4	17.8059014711272	0	1.28340550958123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5804475-3	12.0053543151068	0	1.28527953741694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14206995-4	28.0375245525637	0	1.27590845221191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36792802-4	11.9999791433103	0	1.28432369985524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38425875-1	3.75466578750405	-2.34810591668504	1.31778038449009	-1.78186437157632	0.0747713518284359	0.500000896088925	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20382730742941	0
Merged-chr17-7917370-4	22.2685338308935	0	1.2779100850777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123430021-4	21.1908248481863	0	1.27817117270816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117250445-2	4.18733087512285	0	1.43774683266541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63828632-1	4.7891261409582	0	1.32477939810632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46464677-2	4.24294467925857	2.49756639062602	1.24036715515877	2.01357024026191	0.0440546735325444	0.339113105265699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr17-45585453-4	29.8463126662269	0	1.28357282724117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5446587-4	29.9654768893105	0	1.27830191099916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45635406-8	83.9020465292014	0.0582906774875738	0.216969483104651	0.268658415245699	0.788192555371134	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.50040667800759	6.56296988895094
Merged-chr7-100992220-8	89.6299336328667	-0.42157736293133	0.223113186064968	-1.88952240056566	0.0588218641060748	0.417983202683293	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.63900287190163	6.17672570888197
Merged-chr4-140975644-4	38.2048456790206	0	1.28294029560286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145270344-4	39.6323259611447	0	1.27946253677579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102502572-4	18.7609949330375	0	1.28265552264062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3491373-4	16.8382251603136	0	1.2829554211543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43737165-4	32.2049380684597	-0.305194878635001	0.235115132892486	-1.29806565353903	0.19426477548723	0.996892258441066	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39554885382516	6.05179823455461
Merged-chr13-112787184-4	15.8903907628552	0	1.27949449401324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130839584-4	14.2925069008631	0	1.3075476498949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151210532-4	15.9949596877421	0	1.28044347582729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143149134-2	4.03998223801102	0	1.37407898251791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21067341-4	8.6297145022603	0	1.28966930378431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34771370-4	19.5483997389738	0	1.2811991300099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146172429-4	11.8074325437218	0	1.29415641712422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85284414-4	16.2695468056552	0	1.280237789606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62056594-4	54.1243048783848	0	1.2761822704336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9814622-1	2.70696933153104	0	1.57653279574207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118478420-4	25.5232621343274	0	1.27974160996843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20830252-2	14.4834556658096	0	1.29040374024785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77032559-1	2.94416415338097	0	1.36972977723439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7769869-1	3.73142521508722	0	1.32821168332024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52603001-4	43.8361358995712	0	1.2787658023486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60716881-4	18.1959278168373	0	1.29864758992511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68382571-4	20.9980597933137	0	1.28262386333222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122921037-2	3.10053150142717	0	1.36673845798414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70084799-4	19.0913641034945	0	1.27757237692339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104995835-4	18.0197071437935	0	1.28639944578567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53616080-4	22.0219873325453	0	1.27596292843579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67611099-4	17.8272723779128	0	1.27971805858922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30953577-4	48.3176784459663	0	1.27672887683795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106540409-1	3.42125404440233	0	1.35763321156591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119925444-4	14.170712154942	0	1.29588013327021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118804817-4	52.8291344291088	0	1.27943374876065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109456997-4	9.71566372265053	0	1.28755318604008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103258361-4	17.8745061472076	0	1.28297686691475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120938031-1	2.63278495777654	0	1.47572268912802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34943915-4	14.295490232054	0	1.29293296876487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24779721-4	26.3213238831622	0.312844198086151	0.280985541736125	1.11338183506945	0.26554447311185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43272760185571	5.82616938282155
Merged-chr15-53259422-2	2.69578985176927	0	1.47341055921842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46535343-4	15.8793096857178	0	1.29264526617312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105637102-2	2.74783720682215	0	1.48455413511679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69156649-8	104.9953707593	-0.22342170277342	0.18653875932299	-1.19772268017805	0.231024996785193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.06258762226597	6.84604017190273
Merged-chr1-182944903-1	4.98167672803081	-3.87118992299243	1.07417007675098	-3.60388918550175	0.000313490756739902	0.00773032716600968	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42613330519089	0
Merged-chr14-74841899-4	17.231627746265	0	1.28414946323362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97241486-4	18.6951089927627	4.45490978719712	0.969236744614025	4.59630715813522	4.30044611756484e-06	0.00025771072296592	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.08137280208315
Merged-chr5-118463757-1	3.28827245847509	0	1.34801073104737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31235601-8	129.687488471299	-0.548530677215727	0.145965877917715	-3.75793771147631	0.00017131951212921	0.00484566782937856	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.42396390548523	6.86086810299928
Merged-chr1-191111452-9	159.69984994733	-1.02860994269868	0.177311144573091	-5.80115787518742	6.58585559092003e-09	1.2483240759146e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.90132264339955	6.80831041687587
Merged-chr2-153238099-1	3.45901342562855	0	1.48670476808558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145252771-4	19.3183808932381	0	1.28911461414098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128360749-4	15.297782274205	0	1.28950155827749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55129511-4	38.2630511983321	0	1.27805995062689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58355452-2	3.10272373315517	0	1.38870003367752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117079512-1	2.51224711451604	0	1.41313849140771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100325225-4	25.451942545678	0	1.2832576340168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65516890-4	15.3021146957775	0	1.29087527257849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75872435-4	31.6928717541384	0	1.30387901798521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31283252-4	29.9335479358809	0	1.27912284672319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82958521-8	156.32942873005	-0.0763025782827715	0.144463639594163	-0.528178429514347	0.597375499316998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.42410880836589	7.32460089761024
Merged-chr13-52636383-4	47.6425201350538	0	1.28234100155573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81146497-2	6.45561473448001	0	1.38654025644614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122310931-4	16.2267495317518	0	1.28112971352866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9341092-2	5.0052296786406	0	1.30133733249788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145254571-4	37.3879047040222	0	1.27940180218949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55450541-4	51.9436026563897	0	1.27722562485425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22547782-4	19.7456672043233	0	1.27933876673703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141182150-4	21.5165343632862	0	1.28177663490005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34189450-1	2.49384100418844	0	1.46130063271378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103333102-4	21.6769778493062	0	1.2818578846217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127576527-4	16.1137096477107	0	1.28161632814489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72603097-4	22.0569793893973	0	1.27611709728797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88149189-4	15.5106807795649	0	1.28038892473573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80046819-4	63.2015998283685	0	1.27519403090306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36083116-4	33.2422587948756	0	1.28027733365316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120832039-4	18.2101575048619	0	1.27964299765244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128983924-4	38.9081941628468	0	1.2772973509603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77279762-8	81.7848264557786	-0.0192835724145298	0.186355436522129	-0.1034773805069	0.917584100853132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68606351844056	6.68838971670145
Merged-chr8-95037208-4	26.1397253273531	0	1.28225857506741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90048931-8	75.1093847462569	0.0839605018573594	0.228972723534799	0.366683422205088	0.713855173680438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.41139376409333	6.46968428336473
Merged-chr1-80648159-2	4.90327666499179	0	1.42482015649562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40329280-1	3.75712696590235	0	1.33407555296287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101659208-4	21.2054446735008	0	1.28431247956837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33951109-4	23.0857274280678	0	1.28248636225693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41444544-1	2.19187767544691	0	1.41210019577883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-139861854-1	2.82454697272978	-0.683703416806307	1.1785032781787	-0.580145536686946	0.561816477835736	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97456020110686	1.20539659680455
Merged-chr2-32969574-4	20.1485702482298	0	1.27716388059736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23446223-2	5.93005976160094	0	1.2970578588291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134557059-4	34.287624452068	0	1.27963928877705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99333138-4	31.9835816939215	0	1.27809390331841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66144968-4	17.552267137097	0	1.28363817967869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140964871-4	17.3536668594016	0	1.27694428289538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83859254-4	12.3996174016054	0	1.28978920549553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111237457-4	15.5104586112181	0	1.2830909763265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31997071-4	22.9424720748437	0	1.27925188322906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71008529-4	26.0848438541917	1.15112257072512	0.874456235802691	1.31638671393139	0.188044279449893	0.974846607293351	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	1.26501898168246
Merged-chr6-42339378-4	18.1364134112133	0	1.29208151222663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66147801-4	16.9829281366314	0	1.2850951520334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65837248-1	3.96381067995135	-0.171288367169006	1.03977692779247	-0.16473568761779	0.869152026059325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69496726258169	2.29043377261676
Merged-chr3-105036520-4	14.0832769009188	0	1.28062140792477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107776400-2	2.66504367094312	0	1.44813595673486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181860876-4	50.1032278499171	0	1.28017125703561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5286092-2	4.88925962041276	0	1.40973296358939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12091203-4	16.7101970110534	0	1.28411039392591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133856275-3	6.91939605215697	0	1.32590766846105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-13679-1	1.91488088524153	0	2.43325276927719	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22212447-1	2.61603304855516	1.05914845479134	2.13908913769309	0.495139934156076	0.620501346598209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr2-120348301-4	17.8735487595879	0	1.27578940925107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97192865-2	4.02908907947149	0	1.33752640964518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96854667-5	34.9736926635322	-0.0720527438257451	0.61367280142223	-0.117412314280115	0.906533326183487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32171492902459	6.20899432370262
Merged-chr8-92840044-4	21.9530041335405	0	1.2781347905902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12013438-4	36.690039883969	0	1.27659167348276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36495616-4	24.4386354836495	0	1.2817053133498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117237342-4	17.0981444550829	-0.461975843175535	1.05958913431402	-0.435995262894632	0.662840166532677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.984600738149972	0.469435083901436
Merged-chr11-93821746-4	59.5337417796613	0	1.27767193806751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66041054-1	2.01519430264065	0	1.47556889262283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135907504-3	5.98381999946664	0	1.33926146821234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34887525-4	50.1767247561388	0	1.28143970618381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-114140035-2	4.28630422867378	0	1.35683040522496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65541820-4	44.4055392433354	0	1.28142814815971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63129156-5	82.6000975514762	0	1.27628655148245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70374515-4	13.9429075563833	0	1.28411373228694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35752305-1	3.79570544555839	0	1.35108090109906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17854693-4	60.0805279006217	0	1.27593458291061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102379168-4	13.6157014474528	0	1.2950631864916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121637033-1	2.74061353259846	-1.31034758882535	1.29060794730296	-1.01529483958598	0.309965303554797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.750829579971268	0
Merged-chr8-4335805-4	27.9645200622771	0	1.27615328986953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59744672-5	52.1668183248176	0	1.27390830256542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-65650851-4	25.8222464086292	0	1.28322412429402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83597213-6	34.6060694064577	-2.8331350808981	0.486829606399239	-5.81956200620778	5.90020331644712e-09	1.14748418427546e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27757737421871	1.79248826455399
Merged-chr6-100800624-4	27.987708358863	0	1.28235360709993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89555179-2	9.27053030687481	0	1.30560028247253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112950979-4	16.8865601702474	0	1.29655106494172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61978063-1	5.48199379423885	0	1.36795270991523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53378822-4	25.6163634607433	0	1.27839721838811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59245763-2	3.21592227287077	0	1.44116846521004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87541140-4	40.4274393611037	0	1.27787987806784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86787421-2	5.34211472421835	0	1.44471425378583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76588209-4	49.6413030694983	0	1.27989236242391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165134028-4	16.1616649595476	0	1.281150938446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4526503-4	25.3424397077255	0	1.28228983127957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165737671-4	15.9413064138751	0	1.28412160343258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5819860-4	17.0990953044578	0	1.28869815621036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84174507-5	44.7048866813995	0	1.27945647137029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25891775-4	20.0764456382315	0	1.2831430948998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70215006-4	9.70362521341745	0	1.28759346405137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25557382-1	2.47673729972973	0	1.38084352097659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90737616-4	17.7693822539142	0	1.28084309039001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183320303-1	4.04016873718009	-3.30002399534201	1.03895723426546	-3.17628472713329	0.00149174459347112	0.025871415622628	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3401484452274	0.688405034366054
Merged-chr16-76225322-4	55.1175433540459	0	1.27983157802171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39687531-1	2.60000894570602	0	1.46564616920431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73388754-4	24.7105001243907	0	1.28294787195202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81514383-4	35.0081730030027	0	1.27888476390464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90882373-4	10.3253971903222	0	1.30569640855113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113487282-4	64.0234730589138	0	1.27691708621295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6390853-4	20.8213671737052	0	1.29198757422938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95628668-1	1.91856615141479	0	1.60910563707635	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127243018-4	18.9276910986397	0	1.28063825840911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192753485-8	79.3029252073736	0.474357287902858	0.226612230820462	2.09325545309458	0.0363263569473784	0.294477375149906	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06302252453871	6.58927481749756
Merged-chr7-101027806-4	21.2917453278286	0	1.280979315872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32652435-4	16.4151784662172	0	1.2803942690457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88824731-4	26.1287157645869	0	1.27640088228533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48546676-4	100.549971094944	0	1.28322584766171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191125988-10	100.168439784281	0.00820524831381138	0.187280577058187	0.0438125962804037	0.965053786346761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.94000611072901	6.86268047459854
Merged-chr11-16999594-4	22.818534830102	0	1.27651051411721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-130092643-2	10.5636206296639	0	1.28796301454277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153237279-1	2.2014401499034	0	1.44912961287669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32224896-4	21.0133740291196	0	1.28229317013825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155051128-7	36.6184493463061	0	1.2730070619702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75063632-8	75.9960014571909	0.184167413870442	0.236517219254381	0.778663872554517	0.436177742950168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50500464585687	5.69009397589654
Merged-chr15-8340813-4	19.3838637597298	0	1.27757017842825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6740160-4	26.9051070131454	0	1.27619501284094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136609046-4	13.5896401475549	0	1.29043111723912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39552638-12	329.554654277582	-0.0417540955697466	0.167994633250144	-0.248544222883447	0.803713358318713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.66228142199368	8.59572706088082
Merged-chr5-113634394-2	14.2643487077452	0	1.29193491791146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111457964-2	4.49713278355392	0	1.36943106543544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63130828-4	23.9798005367165	0	1.27491905537531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46618544-4	42.069291387521	0	1.28002776719912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86225250-4	47.5372657068637	0	1.28161359192863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116682718-4	25.5762788374445	0	1.28014305705004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50446661-2	4.56411327921296	0	1.33476396602272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112739196-4	15.7353720726249	0	1.28351899180005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87301757-4	22.315795311458	0	1.28244157827039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108580696-1	3.21267743189462	0	1.36260121061169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145340870-8	214.617404993046	0.368044491749318	0.163928281417301	2.24515555563235	0.0247581481532023	0.221135934757228	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.46198289529938	7.83005746465125
Merged-chr18-5990109-8	121.947863563695	-0.588608138742176	0.167982683169441	-3.50398105112095	0.000458357971646795	0.0103211095848489	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.17278313553146	6.58841973141215
Merged-chr1-125450689-2	4.14436676389269	0	1.48759744772212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13437242-4	35.5228842694683	0	1.28413383200002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100677946-4	19.5738569210525	0.948704742906353	0.547925929063473	1.73144706717548	0.0833720580517464	0.540908509278139	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07639081225668	1.89010511185031
Merged-chr5-139061277-2	4.17942538625637	0	1.41657894319702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68718261-2	9.82081502659136	0	1.31261197522918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194981056-1	2.11781449439024	0	1.37495549478571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177681384-4	33.3662596128954	0	1.27796346155089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7337327-4	15.7586922610331	0	1.27848877353771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52366554-2	5.79961746808017	0	1.33539804443369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145234007-5	57.8914078060822	0	1.28559749246705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57463030-4	16.694860719455	0	1.28379536792356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69309291-4	15.0688241107655	0	1.29212224512317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5850005-4	19.4079891374246	0	1.28374650235475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167860713-4	19.9656958061431	0	1.29325847880319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70489890-4	49.5836344686804	0	1.28003816101197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182908550-4	44.1070321602569	0	1.27589061962216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58046761-4	13.5069202381356	0	1.28415175249202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102748791-4	22.6118259958883	0	1.28055713757856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65568938-8	119.715831540061	0.928284747010886	0.172777229117344	5.37272620792194	7.75550431048622e-08	9.95660480693581e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13064970179356	7.02312711400157
Merged-chr9-104269465-4	17.8049579069054	0	1.28287724273359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3156953-4	71.6086502140446	0	1.28263892712508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79520108-4	26.6044358918559	0	1.27991900440962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100626810-4	24.5770202685767	0	1.27524566665354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150674051-4	53.4046060557225	0	1.27338420532883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131426654-4	12.1099128031754	0	1.29205854401805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141993811-1	5.51892336810165	0	1.2988387207584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49840278-4	71.6260824070605	0	1.27512149888282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118795205-4	19.616303071238	0	1.28652976227982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14189281-8	62.3646402647552	0.0821987760549033	0.237265286841078	0.346442487012272	0.729010199668727	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58349595755016	5.67658451719019
Merged-chr6-83381826-4	26.987040936425	0	1.27512972595326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87512648-2	4.04062364422837	-1.27141823129181	1.29833741241231	-0.979266421145113	0.327448357262216	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.709714069046076	0
Merged-chr12-4208906-4	24.949815680371	0	1.28480305261823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41605132-4	23.1840081358892	0	1.28079764089404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165405449-6	68.9882516418048	0	1.27474218537169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120567676-4	26.0173331505138	0	1.27609580223349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83649243-1	2.09979386340629	0	1.52810211537743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22398589-4	16.2151440747213	0	1.28666925532343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33247888-4	39.8557364043167	0	1.27768202440463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121596710-8	54.7823510963616	-0.204901518934262	0.236137949338286	-0.867719566077556	0.385547871930039	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79098995329322	5.58121947008911
Merged-chr10-50634369-4	24.6100406300635	0	1.29582040945864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134425536-11	98.1997252110633	0.298052539743133	0.178245131657402	1.67214967933041	0.0944948103752604	0.594226735939872	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.54407420060026	6.82794520337707
Merged-chr3-48101053-4	20.3539957294274	0	1.28183425897224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13230816-4	18.0634235494428	0	1.28402812262608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50756879-4	16.4018631653294	0	1.27764951716565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101186494-1	1.98582471852483	0	1.7039378802278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-41387-1	2.96810213533158	0	2.43325243197156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47068041-4	71.2364145518937	0	1.27824745153555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131053378-4	17.1808212727615	0	1.27923158997401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76524838-4	22.2467484393038	0	1.28054413661965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62187230-1	2.76310139275177	0	2.42972201433301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64191740-4	22.4405177168491	0	1.29110629441492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117231814-1	2.59701447891065	0	1.46000249271613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-190174835-1	4.60224324029598	0.128153141644803	0.81427945640134	0.157382260644483	0.874943593184548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60499152794271	1.78917914819163
Merged-chr9-118658817-4	61.4390576807922	0	1.27930587129543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71864177-6	46.1562336436522	-1.52313233127743	0.39700200195977	-3.83658602162862	0.000124756509888902	0.00377133855847929	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34455596598742	3.62843519411555
Merged-chr5-3420630-2	6.08743006777098	0	1.29782054521364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127596921-4	61.0916220159801	0	1.28009459017983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85980185-4	16.458609923953	0	1.2794347708178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103103109-1	5.95969963600492	0	1.3015502807507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20004768-4	34.9358911412484	0	1.2776236958094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81694142-4	17.3341471105919	0	1.27871226593666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171114083-4	37.3051827657878	0	1.27888911149061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118277658-4	32.0357024004712	0	1.27876838319097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14650949-1	8.76798307784083	-1.06939625083065	0.93936603786538	-1.13842337036237	0.254943739973851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2593705725926	1.20997209872237
Merged-chr15-27670334-4	41.86874658492	0	1.28036149732731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30925234-2	4.14248225034436	0	2.03396381054878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50452624-4	13.3152034379731	0	1.2790117538825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73122663-4	39.6637119451962	0	1.27840403097442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57948162-4	38.7770515108208	0	1.2781658281909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35507341-4	20.0525199089704	0	1.28419879589984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50069178-2	7.61455959189685	-1.52949450329848	1.07560560015402	-1.42198451093921	0.155030747497985	0.849292771927996	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72018358517624	0.729295484888209
Merged-chr6-15816677-1	2.29422761942077	0	1.3946155361271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47790940-4	19.6410511275144	0	1.28002961172606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30435551-4	18.3341842999136	0	1.27551390204461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26437743-4	34.7412461070268	0	1.27840917744523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49083286-2	4.93540268669563	0	1.37388299868089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96743421-4	10.8023479113616	0	1.28920258770903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46941440-4	44.3378693139201	0	1.27795849908787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108832574-4	42.5953414301035	0	1.28134821501837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47171357-4	24.3371732906876	0	1.28578026762373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20967330-2	5.75970397894914	0	1.33374595454531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73645781-4	33.48094396692	0	1.28274455340153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95887946-2	8.10162031267445	0	1.69472298061921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95151288-4	25.3066565718672	0	1.27938281665834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75473631-4	13.6343996537206	0	1.28283279571142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8580024-4	39.0917211583066	0	1.2920350508383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117872724-4	43.6309661931672	0	1.27985934955692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71952754-4	13.4932388563382	0	1.2901346187875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45270231-4	19.2104421454989	0	1.27769173409714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29845257-4	28.3389751246868	0	1.27839998484817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63082285-4	40.7649744369058	0	1.2755216325216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39232835-4	10.5167733420824	0	1.28305852250421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39552147-2	3.54704214029252	0	1.35006748221068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123564681-4	11.2277017730947	0	1.284480088351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17728847-4	28.1510800985229	0	1.28171811168745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167375378-4	72.5637717618576	0	1.2776277900511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95887578-4	20.9640409950088	0	1.28471650265708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81788827-4	15.0921757310713	0	1.27995431673621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141065317-4	9.73067944596288	0	1.28918212226147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103897803-4	11.840222747805	0	1.28101763598607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100737847-4	24.8876825106732	0	1.2812519426055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85154147-4	9.31625773916748	0	1.28811127979444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95552216-2	6.0688268191733	0	1.29844163020415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4198944-4	27.1083081961741	0	1.28271011208702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16199695-1	2.0640025429979	0	1.49447338031016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31349212-2	5.22180871277999	0	1.36958999208086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71377640-3	9.07438265808448	0	1.28737395350396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54908827-8	41.1790595980861	1.33407265698039	0.323861133662787	4.1192737204751	3.80068449802648e-05	0.00146398429597043	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62689376091651	6.22317064093585
Merged-chr13-30549028-4	13.7309772280593	0	1.27980106090483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97446813-2	3.97645952024327	0	1.3740239488811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131517734-4	11.9520404537859	0	1.28669015167075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-20280-1	2.6485014748686	0	2.43325250759818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29463834-4	17.4156889723583	0	1.28092519297343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73459845-2	3.4850369975056	0	1.35721315993039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98283299-4	17.6075216719111	0	1.28144850610594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22727303-4	16.9341883315932	0	1.29427571465624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91242728-4	16.5176105956891	0	1.29173140723772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54246642-4	17.793326060534	0	1.27888632674691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117339564-6	62.5358256751921	0	1.2814320700545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167167473-4	14.2104982614081	0	1.28350032486769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88458277-4	16.1598354706088	0	1.28144870635269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80323929-4	17.2960363355565	0	1.28051777939629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153501991-8	42.5959768192427	0	1.27495846766923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181247386-4	37.7051863453738	0	1.28070931746989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76615455-2	9.28916626125209	0	1.29981003718168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94262116-1	2.71827950996751	0	1.39513462487662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20997346-5	22.2123015217451	0	1.28247196082722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84715209-4	34.6801075443546	0	1.27567563712008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35657011-1	4.98010210022791	-3.44124742503954	1.2762988964562	-2.69627078311717	0.00701206388955911	0.0841988840365912	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96948547530708	0
Merged-chr10-81297321-4	32.1365671987422	0	1.29289087311898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114316611-4	20.5659174142892	0	1.3027601909587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48718016-4	20.3525931556475	0	1.28415995172661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21031993-4	19.5137070347352	0	1.3072588293059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43789141-4	60.8478755388417	0	1.27661656421513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180393262-4	18.6893485203474	0	1.2785640733991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94183341-4	31.9411479281149	0	1.27584956977763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117866856-4	24.8059202590399	0	1.28178853867568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49183953-4	22.7198751749176	0	1.28497442586285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135631640-4	34.5814938012851	0	1.27421983729489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35890704-4	32.9505921903056	0	1.28601119464085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-105065002-4	25.1596957599278	0	1.27669182865221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32869676-1	1.78618137138019	0	1.86661298992384	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120011268-4	30.375875630076	0	1.28313475420201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121376573-3	25.6796983040007	0.919023769508969	0.535533263669514	1.7160909169521	0.0861454034251751	0.554333582690448	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99245006301899	3.23310585692455
Merged-chr13-18785904-2	6.71576972899156	0	1.30058822863771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27160024-4	13.900431445593	0	1.28286268356825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49159133-4	29.184131211195	0	1.28448032947084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120835919-4	15.7598328191645	0	1.28294537323744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124652943-2	3.53684151905312	0	1.38991576412926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71237603-1	6.6143649510301	-3.21192370840948	0.865840746425896	-3.70960101111894	0.0002075861255613	0.00563093522662047	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92420919593771	1.40918939303534
Merged-chr14-32798153-2	5.17116861622973	0	1.36506173492711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65630242-4	38.688919703533	0	1.27748068091933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9058703-2	4.39950865966742	0	1.37811642107392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166481100-4	29.6420665915435	0	1.28565291320896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57341733-4	20.4594731021948	0	1.29409803819124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40814835-1	3.76128249872844	0	1.33143599708755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141552618-4	21.0838618608519	0	1.30278147044563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10325744-2	8.10780207895862	0	1.29885008065475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110190252-4	14.7158153589141	0	1.28868718106038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34570256-4	34.5468857241596	0	1.27934511591521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5603702-4	16.5348019175979	0	1.29017952167296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132816606-4	15.024274879333	4.07144079368119	0.992719691641885	4.10129951884739	4.10836364185275e-05	0.00156539434717498	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.0900981927122
Merged-chr15-88743546-2	6.05769030032146	0	1.33542977927443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79871336-4	20.366318301053	0	1.27607750135012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33045874-8	110.326164871982	0.869609408474387	0.168829370044534	5.15081829805443	2.59352365085661e-07	2.73141067963564e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28336184160189	7.14278624735747
Merged-chr10-86990008-4	25.7791186607181	0	1.27772369706789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25076188-1	4.35569289386205	0	1.31871821025503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117188635-1	5.41412365457041	0	1.34455818418911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21715458-4	35.1134606464545	0	1.27600573714598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3732801-4	28.7365594126379	0	1.28237422268468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126517321-4	39.6226408075748	0	1.27764876528427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20358062-4	18.6752759785174	0	1.28014225829588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112443362-4	13.526999102537	0	1.29512747744423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75025542-4	11.2507836474543	0	1.28953675108611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17345051-8	58.5366690951189	0.721602189693793	0.227776430525845	3.16802835143172	0.00153476552711206	0.0264131651658322	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36246551266224	6.08625730303333
Merged-chr6-82997914-4	22.33389690483	0	1.27878892655961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166140618-2	2.43759614856319	0	1.52610555763081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53554659-1	4.95616771312591	0	1.38636355512846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19876939-4	25.4541067457365	0	1.28774307011403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80935519-4	33.0883895660011	0	1.29155693246081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78403417-2	3.95417950363878	0	1.41020741074712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86059589-4	15.5522052278467	0	1.28444669513234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116460589-8	89.7173365879066	0.625987468968369	0.188193314183957	3.3263002550477	0.000880070713026019	0.0172244756778853	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16174193312656	6.75904579339667
Merged-chr6-134065260-4	29.9745887387648	0	1.27548299600157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-72109140-2	4.54748424454881	0	1.34068765423795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150798958-4	36.0820789367187	0	1.27931023446588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134116587-4	21.2900858075277	0	1.27994103024112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90197557-4	23.1601559275778	0	1.28202529501792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63051274-4	45.0544246597451	0	1.27798916201794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121804404-4	38.1091775399282	0	1.28123648556624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92902084-1	1.17453957844752	0	1.8942273654017	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15995734-4	13.0825333720715	0	1.28369814723844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126890089-4	19.5231341254918	0	1.2891500561096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91666795-4	16.616048467018	0	1.2770052039887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70257274-4	17.5249136417051	0	1.28985635735524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65600056-4	23.5272657978598	0	1.28051463835914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4032590-4	24.9759948760826	0	1.27982843238214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14835511-4	43.8536502641345	0	1.27687534363739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11691299-2	3.94307692051549	0	1.43988875310121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26571581-4	34.6311001860398	0	1.27746010614845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4894515-7	33.0108021760592	0	1.28555071370725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41883831-4	16.0923633114588	0	1.27979867509862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74462764-4	17.5211237714821	0	1.28745702402017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145888522-8	111.108160103676	1.01872412599109	0.155483657636989	6.55196913600737	5.67832797627129e-11	2.20866678534181e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1505802315543	7.19367031428948
Merged-chr11-110427331-4	32.6387219583886	0	1.28367426315454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46873604-2	9.14558352481848	0	1.28852414964381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-119906726-2	5.23553902634953	0	1.38127616226549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31280471-4	50.7112840358754	0	1.27769598727197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21024753-1	2.60012623794981	0	1.48650404514432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35208523-2	3.36790648382168	0	1.41861240956425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94564637-2	3.18149116890085	0	1.38084615226147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10429838-4	15.7029635644245	0	1.28732976121262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118363254-6	36.5113920528057	0	1.28201247112542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158167869-5	47.4028425442757	0	1.28411786300912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89552650-4	30.5719716904715	0	1.27840015393022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97659654-4	50.3856537265813	0	1.28217847936574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66220539-4	14.6698584720894	0	1.27930915984412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16228409-4	46.9492135187827	0	1.27683219926245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55232369-4	97.6996890480973	0	1.28250437099972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10583577-1	2.31759611529561	0	1.43658871021252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22108364-4	22.5857568983291	0	1.28226464349391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66375640-2	9.8529089548218	-2.12769799040032	0.527713864785474	-4.0319160294666	5.53239556041116e-05	0.00197336201032002	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15533539120231	3.07370578505094
Merged-chr8-11455622-2	3.13354112558492	0	1.4499549391751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24530213-4	14.926180711299	0	1.28406222454641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73380508-4	13.0477059541169	0	1.28167904632528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53397771-2	4.11487065132349	0	1.47215279215396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54954810-2	16.5409003094717	0	1.29296895498544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35955494-2	11.4831588627965	-0.221848067820098	0.530302875368872	-0.418342192969976	0.675696944913597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77296082015308	4.41102395105928
Merged-chr6-121338312-4	12.296653298297	0	1.28534487359073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107982820-4	20.0776628414833	0	1.28153606171699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105558036-4	79.9964578773237	0	1.27972821807247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125764600-4	17.4585352267236	0	1.28222631940298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25087723-4	33.3835179735087	0	1.27807795863758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78015652-4	17.7778532175318	0	1.293031130817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100436899-4	39.7621913113336	0	1.27698191072616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88441383-3	38.1031720962334	0	1.27738515396431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126565419-4	31.8631424655746	0	1.27554995900716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44437951-8	86.5171272234987	0.885830468876656	0.181154745763327	4.88991036444591	1.00881904770198e-06	8.0690132114277e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17589419006606	7.07440368179062
Merged-chr16-73647568-4	29.8059871413339	0	1.2784757812155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47303574-4	26.8480482636765	0	1.27865503065573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72835336-3	11.5279811627314	-0.783309418717976	0.643076623711551	-1.21806545260045	0.223199100985382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84520688232711	3.64556326003117
Merged-chr3-121330356-4	10.1773232688382	0	1.28974483774188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52070056-4	31.2464819633908	0	1.2762505034552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34557651-1	2.41844895681052	0	1.550724229192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103945097-4	23.3837131131335	0	1.2786606584512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119377790-4	15.0090497972926	0	1.28287134570177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110731845-4	7.85067818157237	0	1.33849958697476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-95698231-1	2.45898223200982	0.441695655147446	1.03439980505152	0.427006707648642	0.66937444209817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60961720436602	1.82166021832917
Merged-chr17-5210425-2	4.22711907217502	0	1.35479400077488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174018189-4	28.8643506432037	0	1.27567781763116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49411856-4	16.1866926379845	0	1.28478545489057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85812679-4	16.0182611744525	0	1.27968694142194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60620800-4	35.4747398177227	0	1.28273971152529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79455611-4	11.7655771711589	0	1.28513079320524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8495368-4	36.0759119274719	0	1.27705651609728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-18882620-2	3.19456756827005	0	1.43783497310459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39802282-4	22.9883827905361	0	1.29108284819555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103007096-4	41.5867318578565	0	1.28088483342391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128719532-8	62.1282678555165	0.764572612716592	0.169984677626294	4.4978913593464	6.86307495869032e-06	0.000375606780779378	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91538600612935	6.65344616306216
Merged-chr5-105567057-4	31.694132961982	0	1.29692967984719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65535461-4	78.6946593785879	0	1.27645457907609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64885231-4	16.4416206678456	0	1.28103926326362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56370894-2	3.23116269023925	0	1.79418250222732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64884428-4	34.7675599306097	0	1.27753156967673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46516016-7	30.2437582431784	0	1.2762006804327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95851105-4	39.0766399725136	0	1.28254694297028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142370170-6	37.0636765059094	-0.0582063718803345	0.231420429836878	-0.251517862625018	0.801413753602862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55574030732176	5.51216198126962
Merged-chr7-29005987-1	3.44247951625982	1.656588956847	0.984041043001793	1.68345514511632	0.0922870156561399	0.58334178033141	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05492522478848	2.5224352130397
Merged-chr3-138521459-3	11.7802995865226	0	1.28408195328878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53387574-5	29.1510232722963	0	1.28306421549955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121250216-1	3.04524636426739	0	1.5619306795503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53289323-1	2.24946725160627	0	1.46493746319288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113242314-4	9.37606292162687	0	1.28951118278539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57387170-4	14.0245538052846	0	1.2884669998421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85099267-4	19.9315524833288	0	1.28329212105601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55551159-4	56.7497954247529	0	1.27800966180184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14125469-1	2.84504828459082	2.38078827400272	1.3083829369817	1.81964179347596	0.0688135727108394	0.469328150687769	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.890396206374751
Merged-chr15-99017449-1	2.88275173248003	0	1.47255427939702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111805915-4	13.8065722094574	0	1.2833571156173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79841485-4	21.9086622340063	0	1.28222537461759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3144940-3	21.6146412764271	0	1.30083866060426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43643352-4	39.0074370962739	0	1.28345230088078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4756636-8	74.5014418580102	-0.173844402356296	0.169862832738444	-1.02343991062472	0.306099897265967	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.73188240990768	6.56407538063493
Merged-chr6-92101184-3	17.6422803888138	0	1.28577465984665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139169524-7	92.4342759844365	0.914066046121697	0.195910462874705	4.66573368624161	3.0751777917364e-06	0.000197010360763536	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11419016172893	7.03063744723358
Merged-chr3-149394023-4	17.1933391484966	1.75052008702909	1.07302170392886	1.63139299104535	0.102807422874213	0.634556895734233	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.10459859746439
Merged-chrUn_JH584304-9526-1	5.74327216784141	0	1.35124171223904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30712183-4	27.7571483680325	0	1.28031578226928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32642673-4	18.3033861031782	1.95483734023052	0.676925684780616	2.88781676361425	0.00387925785132272	0.0538452240850187	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	2.80580015938179
Merged-chr10-8759372-8	68.3879233283743	0.412157159906658	0.234379646216222	1.75850235530448	0.0786620711706612	0.519007643650851	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18854591291522	5.59926301601131
Merged-chr19-6296741-4	24.1349195311634	0	1.3274945186274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29259546-2	4.31006733808305	0	1.45526992757897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113436506-4	14.6722196381235	0	1.28670067715426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95808063-4	20.4581636532643	0	1.28003874659809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73054032-4	15.788714665318	0	1.28207733369244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88075289-4	42.3373492888383	0	1.27707409943232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63911444-8	62.7788011650283	-0.255899737414356	0.244211582613185	-1.04786077169683	0.294702758200948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04961460691647	5.80639030204633
Merged-chr14-63422773-2	4.81329936613613	0	1.38513433860931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19950971-4	24.7896552192884	0	1.27600546664865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117860078-2	15.2957076174045	0	1.28636994985181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38483500-4	30.7024027112082	0	1.28270253944296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75137274-4	40.6960773945232	0	1.28057698848807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19896069-4	37.1609568610438	0	1.28088102033031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87260734-4	20.2317781226713	0	1.28049895697539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11588189-4	31.6162221352431	0	1.2740850085441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80146143-4	43.8223515183516	0	1.27676219388007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75176825-4	32.8277037009481	0	1.27994476917715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43786103-1	2.95592765268051	1.40716130903572	1.24943760329045	1.12623576025718	0.260065740763831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.683637474991079
Merged-chr2-167760194-4	61.3872165339907	0	1.27742848823487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108900379-4	23.3839411708609	0	1.27606807636623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73553061-4	18.343294088561	0	1.29420350432849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44248279-8	84.4196044844123	-0.00742189209373794	0.247090439038308	-0.030037148028165	0.976037426685079	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32500840753308	6.29763806349832
Merged-chr13-41600193-4	18.7249467049586	0	1.2906766521822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85941115-1	1.1101599114297	0	1.67389904464201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5929732-4	27.7660334873502	0	1.28360366675103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12533116-4	27.0072130905875	0	1.27828784138292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132652997-1	2.42138427494864	0	1.36267511707269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20123591-4	15.7751369701532	1.32242907793995	1.28168868515494	1.03178649640657	0.302172146536002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr10-99081733-4	45.4110986582691	0	1.28526532111021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63026760-4	24.3535160195687	0	1.28617289180712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85569068-4	19.1330967054108	0	1.28256512768776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75573345-4	29.0902596583558	0	1.27985611702319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86470698-4	16.5608975623551	4.27990890610744	0.950872804661549	4.50103198358988	6.76243282117081e-06	0.000371342802632124	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.87080228804603
Merged-chr3-9342266-1	4.21969813913782	0	1.35394539637387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33074229-1	4.09433729190623	-1.47267955180416	1.17652100253157	-1.25172397996748	0.21067045899518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29218595271465	0.306240821987646
Merged-chr1-64343447-4	9.41247241356053	0	1.28664580451279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72145679-1	4.26671096938214	-1.15412863210845	0.944204883894331	-1.22232859816219	0.221583388689098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50675185257402	1.07982873328226
Merged-chr3-145913477-1	2.40966108759192	0	1.37968127695549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110598576-4	12.5605173413235	0	1.29058601740422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46790879-4	10.8083656156824	0	1.28973827902509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-12304050-1	1.26752833028449	0	1.51931365683647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59346688-4	36.430418457697	0	1.2771579477688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34716620-4	22.2067032565662	0	1.28190028190974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43917051-4	12.4998677954232	0	1.29423415917844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4509939-4	11.0094141825328	0	1.28016303043602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51833604-4	27.4434906125224	0	1.30706982251044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14098787-4	10.6492511924089	0	1.29362464109806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30730242-2	3.17521729231146	0	1.4183287339479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19419079-1	11.3453819731391	0	1.32143773416325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120452572-4	16.3326708248322	0	1.27941020492277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11548773-4	19.5150791997683	0	1.28225928246816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41368422-5	21.3075342427094	0	1.2804059915941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119131312-1	3.49362512601568	0.442519098385887	1.02370144720549	0.432273588743944	0.665542580503176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05755081291805	1.10669213789164
Merged-chr17-45752890-4	81.6725173213522	0	1.28186226980661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182380861-4	32.5849484193704	0	1.27506691375881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70998822-2	3.34102945844463	0	1.35701688141362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63091210-4	11.6010912902371	0	1.28632196116529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94521887-4	24.1644424722854	0	1.29139242930396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74839139-4	23.7722006223153	0	1.28674397079885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27449629-4	20.0137414373858	0	1.27912296396606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23984833-4	12.725071455897	0	1.28478947372328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126537011-4	20.5265225796594	0	1.27792138270773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97659128-8	129.633891657106	0.149401815335137	0.253778095867664	0.588710443367202	0.556055531052695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22696260380261	6.38777790639645
Merged-chr7-45095558-4	29.6036170261631	0	1.28080184576634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72512661-5	58.2739813468379	0	1.27475199507875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-40500603-4	36.4928771404793	0	1.27870552624461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11098581-5	67.8756751488551	0	1.27666680632186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148556671-2	11.7207160841102	3.15083147762608	1.07620114065703	2.92773475012531	0.00341441197777908	0.0488758302519061	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr10-44071295-4	10.81467483518	0	1.28626274073125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69145460-1	6.97955271180475	2.11175496966193	0.800576452473247	2.63779300919733	0.00834475000067885	0.0962570226909726	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00094035035971	2.31653289104558
Merged-chr5-68049745-4	12.9754634199359	0	1.28446936562149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50763170-4	18.6330873453983	0	1.28041473106071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97951314-4	19.2086222319809	0	1.27784197762204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50753268-3	10.8337123395342	0	1.29124855914515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110411701-4	10.2461477522199	0	1.28642503385456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65309063-4	19.63819686988	0	1.28020248631826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109369296-4	80.4118905747673	0	1.27366339264997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164681665-4	18.1451458565515	0	1.28092239820711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-48928-1	6.17091042328571	0	2.43325178913462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31510630-4	13.7017321277891	0	1.28320078787582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-64726521-4	33.782529639011	0	1.28096144548751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126541021-4	18.5242270791501	0	1.28611024409063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20968044-4	17.2884921166218	0	1.28302580235494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82888646-4	19.632985397673	0	1.29035780385144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41344839-2	10.3480543565085	0	1.29084169131028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8927825-4	51.4536935863099	0	1.27709010680275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83817632-4	21.4340976373117	0	1.28130603494322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31291083-4	24.9081546287984	0	1.2799154053675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63747855-1	1.92674936457323	0	1.63165632990161	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73193296-4	18.6803562491775	0	1.28508482946229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40551494-4	16.4489394909072	0	1.28256626052057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83636114-2	5.598472704998	0	1.37209107903063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85479343-4	27.382498843907	0	1.38474773139335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122840411-2	6.18960389143033	-0.556022162432998	0.852146840432082	-0.652495715587077	0.514081435853885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62649546083242	1.79795952835561
Merged-chr13-112753517-4	20.5578944955315	0	1.28020626774711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152526926-2	5.37645833328658	0	1.33622223072883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90039986-1	5.84876017672252	0	1.29859572309777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144200717-4	41.9236373448997	0	1.27467472871311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91393369-2	3.86230760181832	0	1.4215641497927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41331840-4	18.6536875025913	0	1.28053895791863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129032346-4	16.7715314078444	0	1.2820719060745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84597783-4	25.472441890098	0	1.28157178669386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27540277-4	57.6988111734228	0	1.28302194830009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119177893-4	35.3673748541856	0.960404512904747	0.50276388136024	1.91024961917779	0.056101081181073	0.403742428508634	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37204680365694	3.08320653278703
Merged-chr10-118709872-4	57.9778442883672	0	1.28135682429105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31234250-4	46.2384058544077	0	1.27880384164961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155177387-4	16.963434973061	0	1.28372005307415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37845819-4	14.1429213081641	0	1.28289397724356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5626486-4	27.8319189768748	0	1.28002054638032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80846994-4	27.3664644404481	0	1.27900310672817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88179493-2	3.95471127700719	0	1.36152999517849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96167720-2	3.76512148021784	0	1.378675266329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64122531-1	2.17645892385577	0	1.58713605821351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12302056-4	40.7025287708842	0	1.27722871857543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77837702-4	52.4425977090016	0	1.28011650497846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21974314-3	9.74824711488849	0	1.29128171732891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66845533-4	55.8199073385116	0	1.27762953913042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35783163-4	12.1424177731264	0	1.2843974834646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27401727-2	5.29345476910758	0	1.40815022429634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63076499-4	40.1468032589148	0	1.27557116497132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84619270-2	10.6708884239374	0	1.3275119782889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89796512-4	35.918500710709	0	1.28333330759003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137963797-1	7.44509783674658	1.39608608907112	0.860730717724848	1.62197776879785	0.104808108295029	0.643562360895221	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90638602229946	4.01788589397739
Merged-chr17-71179434-1	4.34937916233841	0	1.30926352458438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110960428-4	24.9657583772671	0	1.27923168763492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91000135-4	15.0538424228526	0	1.28037936824633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52576255-4	47.1358191473095	0	1.27786561106134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117540011-1	1.91227629703834	0	1.70725267509451	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127236769-4	53.0147706943356	0	1.28271468288105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94601838-4	49.7784633196911	0	1.27894503210835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67464821-4	23.1036897492218	0.412129207198246	0.415052104297125	0.992957758631704	0.320730540349539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28501842842155	3.51026811465286
Merged-chr6-86556535-2	3.49216447700888	0	1.32173541851175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67306029-1	5.09692633788319	0.157579923709176	1.0912970599224	0.144396910333819	0.885187056439049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7505983540275	1.76620369058164
Merged-chr7-64011919-4	52.4098270644275	0	1.27476885917533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59184684-4	25.5621612056955	0	1.27732325387201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9454921-4	26.7689385880737	0	1.27797604209358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120263583-4	21.8392850171665	0	1.28276889040339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86487481-4	65.9285326271477	0	1.28325471962301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64753288-4	15.7490362537622	0	1.2778047604608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127183035-8	65.9110449392438	1.35388662278244	0.220038368584243	6.15295701151363	7.60514251759399e-10	2.01200665163845e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31411764793865	6.69129338469293
Merged-chr6-34608784-4	24.95615233555	0	1.27964749668408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65718792-4	12.0079693727463	0	1.28274164299516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51757406-1	2.16935371397581	0	1.66798152257343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114680469-4	13.0035857079262	0	1.28755857135404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19295983-4	10.3082683041122	0	1.2824836211782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115668256-4	20.9057772968624	0	1.29068846185402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127596132-4	25.5666457195986	0	1.2783288608508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36645880-4	13.0198402433117	0	1.28812620978779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132110902-4	30.4335351332673	0	1.28447473779056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63756309-1	1.90454581128272	0	1.84674290080812	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95840126-4	14.3927250019795	0	1.2978203048424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21947107-4	90.5644110779822	0	1.28302281642162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138244144-4	34.9758399703476	0	1.28032485774341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99497637-1	3.55183677685778	-1.8208973163164	1.1959818892698	-1.52251244994031	0.127880728282484	0.741678713974191	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00973535428425	0
Merged-chr18-80408830-8	60.7656723536328	-1.0923314081357	0.214721829800841	-5.08719308674323	3.63401804522863e-07	3.61443749137763e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20717025194508	5.11765630601485
Merged-chr11-11774184-4	19.1196510689453	0	1.30677146037096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109924001-4	10.0023035387986	0	1.2849859460206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38761605-4	11.5584094086532	0	1.28705528709488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72791846-8	42.4409358677137	0.157853020858374	0.30549971666255	0.516704311816877	0.605362585657351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49189917083685	5.67898299753544
Merged-chr17-80100035-4	15.0909464211613	0	1.28440829783166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67958236-4	23.8753975692294	0	1.28152801836878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17176908-4	13.487119827498	0	1.28319463280754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79696111-8	72.0445463369243	0.880969031619143	0.226974251103424	3.88136111182812	0.000103873468183755	0.00326436512188773	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42681735995288	6.28523200515066
Merged-chr1-151041196-4	21.7793164184499	0	1.2975402416149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25203737-8	65.3103269993343	0.0723592781281776	0.269823820835407	0.268172312971273	0.788566685725338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00256049364304	6.02597754268566
Merged-chr18-61767905-4	15.4065815227692	0	1.290855787636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-141081077-4	16.802656488363	0	1.28986078948184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121469588-4	10.6925599301514	0	1.30704160976617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38864139-4	9.86953310892832	0	1.28893579086976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73512226-4	21.2688216290753	0	1.28107488749188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46639201-2	4.59741311674762	0	1.35726474891483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46713194-1	8.49567602355801	-0.790578104259991	0.620768140095305	-1.27354813044789	0.202823604793048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89179784031745	3.9367696272132
Merged-chr3-144669577-4	14.9783737456073	-1.83976802899134	0.643995970964226	-2.85680052661934	0.00427934679118774	0.0577287769234009	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02711565777026	2.15579102048539
Merged-chr11-116868340-8	43.4326131489492	0.43267492799505	0.241950097821816	1.78828168242235	0.0737305736291178	0.494965899359804	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10481934752588	5.5000160423297
Merged-chr3-9027552-8	81.0604005753901	0.750298866876415	0.195116812992448	3.84538295480182	0.000120364308705022	0.00367080986361439	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84047108354761	6.6394197017316
Merged-chr8-88229021-4	11.454372451434	0.537142695564109	1.04139285712571	0.51579256751064	0.605999294185365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.709714069046076	0.581381506691384
Merged-chr3-84345163-4	10.3385705757791	0	1.29795041601238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11282912-4	13.6715535373191	0	1.29894436918726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121735206-4	12.8471427324711	0	1.28970490960225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34293743-8	66.344693902249	0.485850169030837	0.282350553495769	1.72073389981195	0.0852991218839544	0.549834416522055	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83951931235494	6.32456546411328
Merged-chr2-118961698-7	49.6709110964251	-1.24493132581813	0.301179729127011	-4.13351632072531	3.57254913981286e-05	0.00139449694613862	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32101497301761	3.92894682220723
Merged-chr14-76857568-8	43.0099270548789	0.0895771951396059	0.258095048647792	0.347070568028784	0.728538304078703	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80273287998612	5.87844071063988
Merged-chr17-71082119-8	72.9987806628955	1.98278341571824	0.25873273538371	7.663442404293	1.8101446551766e-14	2.23180589881453e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02801099517584	7.00078875063496
Merged-chr3-127293077-8	40.3587977824886	-0.0757173332304109	0.259710790488382	-0.291544810625795	0.770634677611982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13917092830173	4.82924173409088
Merged-chr15-77798135-4	15.311809855867	0	1.28522409002717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50294349-4	12.7891830147102	0	1.2834622490893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57570699-4	11.6763626549098	0	1.28905937101184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49084898-4	13.4835351929869	0	1.3019958099939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46524330-4	11.6801731013568	0	1.29179715136119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87019657-4	13.7172224953545	0	1.28026532573436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85574770-1	3.36261308726547	0	1.32369931540697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33186544-4	11.3545688615024	0	1.29250438042442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55766952-3	8.0489270754457	0	1.28856594383702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102521079-3	12.284125668142	-3.41403745068581	1.22172135402711	-2.79444853724809	0.0051988314701522	0.0671920176520106	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27868872876226	0.729295484888209
Merged-chr13-88459969-3	11.1661684867551	0	1.28601140005424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44518418-8	39.3836832797911	-0.200325831034182	0.333446849377666	-0.60077290101275	0.547991255703081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68987287880899	5.43531862784922
Merged-chr8-128491876-4	11.3952673396789	0	1.28659405002472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64189687-4	11.4735433097471	0	1.28519465368401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64029933-4	15.3978527102076	0	1.28361611767856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54699632-4	19.7865850238279	-2.95860047209725	1.01645474363894	-2.91070555832654	0.00360613671667986	0.0507312400189801	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3396617710571	0.423054662900563
Merged-chr11-100571290-4	16.1983650174657	0	1.29005029314239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36218925-2	8.26444960005062	0	1.3053572222439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135768769-4	12.3754855510535	0	1.29321747212104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43531536-4	15.7400938918445	-1.94596762758564	1.09029076693726	-1.78481528652404	0.0742912829844876	0.497656399580146	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09378858392908	0.306240821987646
Merged-chr5-100582681-4	13.7069606340986	0	1.29661256774128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113269986-4	7.69268042099309	0	1.29666598816902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60628015-2	11.1027610320785	0	1.30185013646623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23846146-4	10.1856050815269	0	1.2884548997678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-64756517-4	9.92540633178585	0	1.284365187947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112266401-7	30.0802247734684	0	1.27463943400205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180422262-4	11.6518076959091	0	1.28204448885528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-116505509-4	9.92320554515391	0	1.28421571497121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51930839-8	52.7609509319265	0.44796749137887	0.24308681921352	1.84282921150649	0.065353950346736	0.451755776950111	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5693422246622	6.0682123701357
Merged-chr12-40656106-4	15.5718102088962	0	1.28273230339558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16119611-4	10.8539016643785	0	1.29682907635439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17905764-3	7.67836009261007	0	1.32983060938196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59265776-4	16.4742412941226	0	1.30599977827651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5849709-4	21.7423730721759	0	1.30551361663268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58269546-4	15.3630110138403	0	1.28388341229785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120763421-4	10.2431982919478	0	1.28540125672276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121313796-4	12.0688774698088	5.40472945627978	0.939109019458915	5.75516723222807	8.65560655245976e-09	1.56678466974248e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.41561343388903
Merged-chr19-5850375-4	12.175640660379	0	1.28718716557685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45442656-4	14.1362905112888	0	1.27888185399707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40018308-4	12.6376695812714	0	1.28968621356182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136915232-4	11.6329435688305	0	1.28992069928395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99049437-4	11.2496207505762	0	1.2896173345403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62224121-4	12.2265107486871	0	1.28591725317013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24264276-4	25.7903542094955	-3.35499154134211	0.563190008613563	-5.95712191272939	2.5671873921957e-09	5.51827063586908e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55824614846716	2.05402110133586
Merged-chr6-89311713-4	13.6118641405778	0	1.28224933795616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99460936-4	10.0567552035801	0	1.29230540547581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113494557-6	40.0130540998437	0	1.27795622036918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53742287-5	23.8926001662478	-1.88201100776169	0.634566608573879	-2.96582105382335	0.00301876079444501	0.0445391607301431	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10235105184137	1.27911570690487
Merged-chr2-102812943-5	22.781872882018	0.980636901910663	0.564117190483414	1.73835670753149	0.0821479799927285	0.535198594277651	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76206021164793	3.08392302876793
Merged-chr10-13837864-10	91.190517977304	-0.0696108322741326	0.189994983572031	-0.366382474765402	0.714079695091185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38067496917303	6.30217066004256
Merged-chr10-126990532-4	9.00929126689171	0	1.28341082222775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55418228-4	12.7828857196187	0	1.29849151320347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73716054-4	21.0523478823716	0	1.28460233499228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45060370-4	15.7885280483239	0	1.29581145177318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119125659-6	52.966844662725	-1.18688260952884	0.312025093645646	-3.8038049942122	0.000142490365141703	0.00419044797504489	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16788808157915	4.03879677247611
Merged-chr15-97663837-4	11.7541001057954	0	1.28287997731038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24165856-4	13.3430162847863	0	1.28058424711877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19466015-4	13.8130261487461	0.317825885255725	0.813229419580345	0.390819463245358	0.695930687318702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.912753244509864	1.15307255889252
Merged-chr14-70060552-4	14.8793155044584	0	1.27923073418434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141655978-8	48.1156862361586	0.600209174422616	0.243362643083634	2.46631597527624	0.0136510853472439	0.139994322520558	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24120877398545	5.6650981389054
Merged-chr15-59737398-4	13.5032588898967	0	1.31311994156667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60752195-4	18.8512717577095	0	1.28698679124072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23015922-4	11.693849812494	0	1.28470096841315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54132845-4	15.1434754355292	0	1.29118011535955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5927982-4	11.6698513592822	0	1.28776714651062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106820691-4	32.7016702031252	1.68976481225735	0.70942028226523	2.38189526645871	0.0172237952747295	0.166741648299626	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2628122582971	2.26276386882201
Merged-chr9-85331691-8	40.8538000517254	-0.0475633230270397	0.328144717287294	-0.144946179296245	0.88475336559386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93332973260612	4.73852207507414
Merged-chr1-120057265-8	61.3889229428052	-0.54511918232375	0.295710872917075	-1.84341947574114	0.0652677886865657	0.451321578784373	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46502517132967	4.99004468405036
Merged-chr8-13673410-4	11.6308772132547	0	1.29196254276442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122804672-4	10.867427592829	0	1.28798399596281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32479367-4	25.6902477465934	0	1.28771440757551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76933488-4	9.99699404028031	0	1.29035474483413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66820451-4	11.1354303558459	0	1.28301455915996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87696698-3	32.463736473794	-0.547075985382191	0.619448609607089	-0.883166055904455	0.377146558543131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64994487525042	1.5268023559189
Merged-chr5-140765671-5	24.3232489452549	0	1.27883079081365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76715349-8	48.9847176429639	0.739124932432771	0.238512423696201	3.09889489603365	0.00194243915630841	0.0317651788213738	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08116421816212	5.73757699593433
Merged-chr10-82953623-8	59.4611243957452	-0.742035987277287	0.227081465441731	-3.26770829065173	0.00108422052758915	0.0202080646308729	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0797513026705	5.28277043173845
Merged-chr17-32528914-4	9.79115943608692	0	1.28981042545478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24599946-4	14.7623319338297	0	1.28883956327108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123612157-4	10.7420915659851	0	1.28216442590091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57902700-4	26.1379115693334	0	1.28691546908953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96483069-4	21.4915539278434	0.880945064676549	0.632398339640015	1.39302241871479	0.163613011443402	0.881000534287247	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60437823299071	2.25795226179178
Merged-chr5-63827153-10	120.737756892714	-0.013101340734635	0.153901000095566	-0.0851283664596049	0.932159338982114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.73351413723274	6.70423005955588
Merged-chr1-127242325-2	3.49418857138926	0	1.36299642680037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8637373-2	3.40301436595785	0	1.41264303197284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122852909-4	16.7756536670003	0	1.27908355130985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102624284-8	79.6345502422179	0.366022967554195	0.285744642109305	1.28094428946171	0.200213234830875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3717776492788	5.72255821263727
Merged-chr10-118812136-4	15.1553186884463	0	1.28340130112985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148511946-2	3.68500078591727	0	1.37571592659786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34410068-4	9.74390629353549	0	1.28211939086023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64398286-6	31.7267849596233	-1.44332347421077	0.362593663990441	-3.98055348879129	6.87549911391023e-05	0.0023634211735801	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98975966702814	3.27427622865857
Merged-chr1-156025262-8	47.7155445756936	0.0338023902227315	0.230053180851957	0.146932940016526	0.883184951711686	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41128523489582	5.42177085620541
Merged-chr6-42376403-4	11.9983801433661	0	1.29216194210932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101549452-8	51.7072006215766	-0.367534354311975	0.238361317119613	-1.54192114204311	0.123092757636339	0.72256731409488	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70788340355316	5.34454393045559
Merged-chr3-127796529-8	58.0877070653166	-0.747308318217264	0.246356415226628	-3.03344371012137	0.00241779812867417	0.0375459687538836	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12217433683346	5.39719750457193
Merged-chr15-79414740-8	52.7996546108877	-0.00943448867111675	0.253845679741764	-0.0371662369070626	0.970352459047963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24357872909091	5.22755946079563
Merged-chr10-82178473-11	65.7480039094467	0.520331354818506	0.266952503871923	1.94915330357099	0.0512771196368238	0.377592366439925	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1795108922034	5.7972569490353
Merged-chr13-43802973-4	21.3681523010401	0	1.28602987323027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53398390-4	16.2543107901073	0	1.27939504745265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105718764-4	12.4213502328557	0	1.29457339746574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127008906-4	16.9679448732585	0	1.28926719129477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136948134-4	17.509081304021	0	1.28871533822783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95546881-4	14.6634024696167	0	1.28521476516413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15243923-5	32.7507708544459	0	1.30286830514584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127441298-10	130.315408635557	-0.826551228453642	0.200034225197256	-4.13204904130066	3.59543682875128e-05	0.00139849651792608	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27079486234393	5.46380016353804
Merged-chr10-127607300-8	62.8532033138461	-0.712120213044579	0.260062580528003	-2.73826481148794	0.00617643201033675	0.0765804396310822	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30206232944524	5.56858381740403
Merged-chr7-19461760-8	42.967352244949	0.756248722610064	0.280415776331945	2.69688365077879	0.00699917206406038	0.0841302774979559	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16186567393927	5.74349071053449
Merged-chr11-68458328-4	47.5574748563779	0	1.28359639410292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128166317-4	12.9329582890893	0	1.28819169018641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121264074-4	22.8556337941624	-2.72971631953816	0.478335017742447	-5.70670391731165	1.15184891503994e-08	2.007165845392e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52597148607875	2.27360810621371
Merged-chr5-114965591-3	10.1348582212316	-2.52063524596795	0.551939509773165	-4.56686865378395	4.95063996771522e-06	0.000286958657848776	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75214341242772	2.03247245696714
Merged-chr12-111471341-4	21.1338599198171	0	1.32814648306193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135706002-4	18.5241259415695	0	1.28293425918464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76328939-4	13.5164847556808	0	1.28972471071497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104794085-4	17.9375357762363	0	1.28488449091382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156002495-8	104.980408446386	-0.0617426445948513	0.205556910037005	-0.300367643120031	0.763896741879688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.74878105448337	6.657415135906
Merged-chr16-91382590-4	20.1105453977966	0	1.28053073791489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32460579-4	15.3603105261114	0	1.28814567973977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102115907-4	12.5248920368331	0	1.28848068834046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42367843-4	20.9707138704553	0	1.2779053628628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125465806-8	79.2275169341587	-0.289604679428188	0.239068896283725	-1.2113858554167	0.225747557807222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82757714321213	5.52294863530066
Merged-chr8-35642149-1	7.06191060322069	2.2089778532113	0.761410173557553	2.90116671660722	0.00371776023855354	0.0519993066242551	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44452193873182	2.8631871709571
Merged-chr7-101003956-2	6.24788244699277	-3.8890441349352	0.912353232073633	-4.26265178684798	2.02015187608325e-05	0.00088596539929219	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43709071335062	0.581381506691384
Merged-chr19-55654601-4	11.7266049373065	0	1.28660456682442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94389191-4	13.49927945771	0	1.28408579725626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104602898-4	12.1615896045996	0	1.29005822110767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60792166-8	40.8430571515603	-0.314923306700305	0.283600388374314	-1.11044737458063	0.266806293340623	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05301126277351	4.53562802578936
Merged-chr4-133756852-8	43.5626873948308	0.385781999998775	0.264735463628761	1.45723581839325	0.145051296505847	0.80860962476293	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28010737442324	5.62308199411469
Merged-chr7-92698918-8	121.248629648677	-1.42750485921768	0.271699100775632	-5.25399184297084	1.48837475215573e-07	1.73135540188198e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.7505268150373	5.32758820579426
Merged-chr13-93996640-4	17.5992151007695	0	1.28428815894404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97195909-4	13.4264383544803	0	1.29150892139522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70839237-4	10.4285545324263	0	1.28595697977965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99619643-4	9.48151648271081	0	1.28375017963015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43139791-2	7.03854042440217	0	1.29799257470764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55734520-4	12.2049066722685	0	1.28284870036176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98055966-4	16.9340918840084	0	1.28204276439618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28247813-4	10.2952469527621	0	1.29129149815722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117836543-4	11.750670089747	0	1.28651688710997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103008359-8	55.1205069991889	0.0668464634590599	0.238169364357187	0.280667766148164	0.778965234226506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.614191858093	5.82083163246715
Merged-chr13-60877514-4	17.849037023412	0	1.30761661414426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106560287-4	8.3037254000203	0	1.29192140842103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55655518-4	12.8040709034559	0.503834137161791	0.722727882126371	0.697128407000761	0.485722438006433	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56341678304257	1.64536602019594
Merged-chr7-130943422-4	21.6513752867611	0	1.30093746058503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172241084-4	12.3284904245242	-0.190728025164637	0.953549070440835	-0.200019098205886	0.841465644722561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00572841130107	0.733321818366247
Merged-chr3-97680747-4	17.2054046536024	0	1.28276666160283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93428456-1	5.67852215498492	1.60928928161068	0.73586264292872	2.18694249134015	0.0287467224761359	0.247919140415148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32199264231459	2.44823763137854
Merged-chr6-137697059-4	16.6215051913048	0	1.28188220356465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-18213777-2	9.25816149404263	-0.463711955936133	0.738012432454427	-0.628325398793018	0.529790796425029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23057871082968	3.3009007084372
Merged-chr3-69163275-8	48.6806399817732	-0.593204143965124	0.212418334292478	-2.79262214319194	0.00522827247970884	0.0674524567540087	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07081045510391	5.48423024225156
Merged-chr17-63422841-4	13.9009302807212	0	1.2913566402962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13601779-8	63.1879847921023	1.25629731853569	0.237127243135337	5.29798812622585	1.17085578368613e-07	1.41686559334729e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03401771508059	6.2235258044408
Merged-chr18-53877587-6	31.4946434669488	3.93332209878696	0.98911787458943	3.97659591423281	6.99088093526054e-05	0.00239301260133858	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.64254215594465
Merged-chr15-94557625-4	10.3542466875724	0	1.28093706555511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-6410251-4	12.7011510148891	0	1.28013113150182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85647486-4	13.626934908187	0	1.28144637916844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31076536-4	10.170049661975	0	1.28284191113239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35170968-4	21.826802267128	0.680233776496409	0.672552589252853	1.01142094665354	0.311814999888237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47952548959495	2.61093010937348
Merged-chr19-10803954-4	8.06423892111929	0	1.29765250886911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106371815-1	1.62579611197554	0	1.62559154863868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81203738-3	21.6062125619019	0	1.28617217623687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36330832-4	6.97899785155146	0	1.3111699581944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21997586-4	10.1261570740323	0	1.29322098905956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37705881-1	4.8168575708941	0	1.33816092366068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-156194129-2	2.85720995676081	0	1.41956082545534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68784904-4	8.45206677528376	0	1.29148081757794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77280688-10	75.8612766631524	-0.385421363127672	0.254544317686571	-1.51416211774271	0.12998472704827	0.750086716151205	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93119323207662	5.48756918825847
Merged-chr19-36768287-8	42.3040000706726	-0.375049208015509	0.262989062352284	-1.42610192477555	0.153838923283235	0.844702857846482	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35628692311137	4.83826277850262
Merged-chrX-143052147-2	7.06955247331982	0	1.28770647650363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19584280-4	11.8214202671144	0	1.28102368593966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43589193-4	11.6221564605351	0	1.28854628754156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8859635-4	13.0532178908999	0	1.29164372469809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27302346-1	2.62905364630399	0	1.36903228163915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59840955-4	8.62477016494088	0	1.29013137724531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164938889-4	10.1318192075808	0	1.28267255452509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90614264-2	3.8827688256352	-4.22127162056183	1.13538471641482	-3.71792182819868	0.000200868401979583	0.00548743586779174	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59190781832294	0
Merged-chr14-25505434-4	11.5095773136147	0	1.28826663219097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8460301-1	2.48680527316587	0	1.40591416672802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92059615-4	12.989820050469	0	1.29690848520249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21657536-1	2.29886059218728	0	1.43224491617139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113450501-1	10.1865331427878	0	1.29428777646687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31127411-3	9.25379522559332	0	1.29364842820086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172504086-1	3.7693875553407	3.56068497499006	1.20440569331978	2.95638338040027	0.00311269917822685	0.0456263886272795	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.40918939303534
Merged-chr5-123398028-4	10.6934191972247	0	1.28665039568622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99386039-4	11.0263744158707	0	1.29438014818033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73880645-4	19.0103868243703	0	1.29221713943381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80210290-1	2.6410396476177	0	1.37954880467098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6193744-1	1.70625034359172	0	1.51919112976738	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32376639-1	1.86531293590671	0	1.39094149767934	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28795991-4	9.50470355755611	0	1.28740923641376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75451912-1	1.27177145803979	0	1.77478631196328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142079879-3	16.0371352862089	0	1.29800791766192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124898530-3	11.5181775944453	0	1.29512775138483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73794239-4	12.8881057492347	0	1.28440724574046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76429062-4	13.3879509900969	2.24709924709056	1.12106847084284	2.00442640706963	0.0450244029242124	0.343750979493584	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.666688015277142
Merged-chr17-50530358-4	13.8224749722488	2.81858075821766	1.11346375858555	2.53136281848828	0.0113620252387636	0.122252797529316	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr8-4524654-4	14.1819522813819	0	1.29787259328137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19338221-4	11.0401913250479	0	1.28266980651532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124621602-4	12.5261183287741	0	1.28231846789677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74524368-4	8.74079517122168	0	1.28790439310527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22935786-4	15.8403242864191	0	1.28259822755212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99091380-4	16.3566784747213	0	1.28499646073264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145806875-4	13.3336331607122	0	1.29367257625014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68275525-4	20.8877788606038	-2.13801214409695	1.13591348573083	-1.88219628603264	0.0598093697479686	0.422693184441569	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32720880109184	0
Merged-chr5-99298155-4	10.5553966871891	3.85869912271631	0.981400304067277	3.93182996451546	8.43016858876955e-05	0.00276406320422346	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.75033869392915
Merged-chr14-57887299-4	9.63017884176304	0	1.28870258081176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194989193-4	13.678630384487	0	1.29894369918185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78182321-4	10.9588494537212	0	1.29055293396298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54160883-4	13.0952284475168	1.95057167367597	1.2416734073538	1.57092167885993	0.116200842342468	0.693638462017991	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr15-58616905-4	14.3590284001646	0	1.29131812489503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80691649-4	15.0656810478113	0	1.28341061673233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36749363-8	68.6706154433727	0.522500912518538	0.284167975319913	1.83870442096902	0.0659586728154225	0.454778463085402	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97804601541973	5.43511522544595
Merged-chr2-36238474-3	24.8716029028426	0	1.29392999582684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115633115-3	7.01859217461384	0	1.29498603157538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100461864-8	77.0234195296239	0.0884194619301378	0.258503075138572	0.342044139640274	0.732317674741915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3732639842341	5.41852889640663
Merged-chr10-77391276-4	15.2047958827874	0	1.28441303820976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83640803-4	12.2411689368694	0	1.30325750754088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152315829-8	66.3217700747615	-0.954385190743359	0.219793618916987	-4.34218789174137	1.41070807071231e-05	0.000667034222784128	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.42206832745837	5.49149933661205
Merged-chr18-76378892-8	59.0045456862074	-0.617097780056061	0.207610501201184	-2.97238230477593	0.00295498480151356	0.0439354805096031	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.69574977968099	6.03345411506544
Merged-chr3-84069527-1	4.60892577070519	0	1.35321948944534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44360103-4	14.3637656949259	0	1.28964539991414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4200226-4	9.92669008682274	0	1.3040536749735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43423212-4	11.8142604154403	0	1.2827143776492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37210431-4	11.747800925761	0	1.28297543867727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102497420-4	14.5661721604458	0	1.28390036948148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116788240-4	19.0442792871754	0	1.2847684383945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170903600-4	14.6874795430305	0	1.29591420344929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12058705-4	15.923969322781	0	1.28904946870676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13860066-4	10.6970423810905	0	1.28443334631185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65490576-7	40.0751945060918	-1.28039940747921	0.279732756510078	-4.57722371685519	4.7118747887711e-06	0.000275898001744656	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25247312235602	5.05095202836937
Merged-chr11-8762391-3	8.93263005584004	0	1.30364642843412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129782445-8	48.2640918357829	0.244717443995056	0.257007983762532	0.952178373653824	0.341006526901071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18401883252315	5.47005104595535
Merged-chr1-89450259-4	23.7545093072211	0	1.2911478976305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77193446-8	58.1654522364525	-1.08485073791517	0.228911827935836	-4.73916419128528	2.14601563428111e-06	0.000147459030113284	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10073835105964	5.08017247784118
Merged-chr12-100445483-4	12.9528650814492	0	1.28823589872109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9173612-4	19.5163533656263	0	1.27585320770614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60269354-8	52.2819656966758	0.71991544855787	0.309954821616492	2.32264639344318	0.0201981562535475	0.188595154560396	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9352173562208	5.59870357568971
Merged-chr1-131700584-7	64.0710963492611	0.248918513574461	0.216682958712766	1.14876829748493	0.250651535043533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51120692218182	5.76600586312356
Merged-chr6-128843820-3	18.0651325267249	0.224164306260246	0.612557746125724	0.36594803947551	0.714403848583831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96261286842464	1.90990595114556
Merged-chr8-35428317-8	57.4194893997385	-0.611010719968215	0.217148969288106	-2.81378595519624	0.0048961817612359	0.0640712099195962	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84970799924933	5.259775062297
Merged-chr12-106658438-3	13.3241141779138	0	1.31433360644762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26438947-5	57.1287987248844	-0.928874070878884	0.185934306679321	-4.99571105229603	5.86193752814958e-07	5.29080344909479e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.44175233360298	6.50973376785246
Merged-chr17-24463966-8	43.8023830234882	-0.189696804697374	0.211335030094527	-0.897611742892435	0.369392576361756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24071221808827	6.02286969075205
Merged-chr8-40584864-8	81.241178602039	-1.48545719313525	0.226037378442731	-6.57173253100528	4.97331419579692e-11	1.95774812914787e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68116450049644	5.19697092707461
Merged-chr16-77251623-4	18.7832321916212	0	1.28097776144778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122934145-4	20.5280007151888	0	1.28894513711284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98781164-4	15.8954055288251	0	1.29248372929777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47272246-4	10.8662222131214	0	1.29181679814211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27379544-4	16.3313066933791	0	1.28236323737658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91734985-4	12.1941606454267	0	1.30843882039902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62382451-4	10.8866524929542	0	1.29111659769703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72255459-7	26.2267802894503	0	1.27871614534168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148940809-8	44.8659977893323	-0.32717290680035	0.281500875189605	-1.16224472332451	0.245136072821944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38785576534634	5.04095119038329
Merged-chr9-97105579-2	6.66252399722508	0	1.34112370052614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143046542-8	51.0993228599441	0.728358869843478	0.236015387452205	3.08606518289396	0.00202824353845329	0.0327495928499552	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01225695223867	5.69127179352223
Merged-chr4-3626791-8	55.5902327812193	0.0490730155428988	0.262403677224368	0.187013444559845	0.851650091681462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1388969291867	5.12509971538285
Merged-chr5-134352928-4	26.4545076688808	0	1.29011619988953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55665044-8	46.8104740604378	0.859419868566408	0.267355757961636	3.21451789600032	0.00130663769733339	0.0233580938583316	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1204884286552	6.00047307003475
Merged-chr12-98820798-4	10.8433714767878	0	1.28809101827229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85488910-3	15.4150503099012	0	1.31025893056113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31209694-6	29.9213727178455	0	1.27844678280741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122054660-3	8.66640900448242	0	1.29360939578531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141676621-13	116.348568437512	-1.16934088767081	0.159766097714668	-7.31908023289888	2.49676293257902e-13	2.14675619200406e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.77417631486918	6.61853409284867
Merged-chr2-163770045-1	9.64319565953575	-0.853615339193451	0.652036804023412	-1.30915208148711	0.190482840265074	0.983450268775741	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77829378252147	3.78730055031641
Merged-chr17-34348204-5	45.889679969402	1.14387397748579	0.271157985749269	4.21847792653058	2.45957044538717e-05	0.00103625461201979	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94774430199984	6.03667831347535
Merged-chr6-29474637-2	9.6053429855156	0	1.32616965352088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93387630-4	10.2775371213539	0	1.28746406662204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89843322-4	21.2923952671145	0	1.28965695307776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21316939-4	22.0613603162338	0	1.29311616817614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28259578-4	14.9548098778913	0	1.28445062647599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104239269-4	10.7696439000197	0	1.29076146124368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134243773-4	11.8920339623375	0	1.28464018543849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121369058-4	16.5159904578863	0	1.2784255796912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100750944-4	10.3718634694203	0	1.28917914824628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22461174-4	11.7466496853167	0	1.29159704499782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8466149-4	8.67606090085624	0	1.3199247649774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54404322-4	11.425214083533	0	1.28703995983668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-164941747-4	15.8083327570385	0	1.28031891246714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50482535-4	15.2132507259629	0	1.30555980009837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148490778-4	10.1917381438447	0	1.28616682765573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11813280-4	21.9572784232699	0	1.44892833635349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103614385-7	27.786549278925	0	1.27688417023194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100411335-7	64.335757687206	-2.32792737857864	0.342760018438415	-6.79171214071138	1.10810485880181e-11	5.48562273509569e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.09724967306228	3.63925430270747
Merged-chr4-28967883-4	23.5337043356077	0	1.29810828936816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17554136-4	12.4207216508314	0	1.28690456519469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8968845-4	12.8738312598636	0	1.29661482455636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4480377-2	5.58253134808916	0	1.40409800513301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31938606-4	10.5113913077438	0	1.2876926845509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5511982-4	13.1944841676626	0	1.2926242018551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62401320-6	21.7275224629933	0	1.27647263368253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26637875-4	11.555102874062	0	1.31035272752257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99608472-4	13.5446902435016	0	1.28788721387996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8382485-4	8.05972970772243	0	1.29656379858531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10452720-4	14.1117903173799	0	1.29090495014833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55876703-4	14.654214979708	0	1.29297892854734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72429588-4	12.2208368774379	0	1.28472486596684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45107211-4	19.5612565854134	0	1.29129988814668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118152557-2	7.05149861659981	0	1.31947582587193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66183334-4	17.7444962563123	0	1.28743853496335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27202946-4	22.6000123774113	0	1.29290666834265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58359256-8	70.6546064220719	0.7324656571455	0.261941246685498	2.79629751485813	0.0051691790850917	0.0668352149771275	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86973699287189	5.6868618936438
Merged-chr19-41381984-13	112.641269731044	0.569321325372799	0.193300079514321	2.9452720702612	0.00322670790121868	0.0468509184199184	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61743803887693	7.214987015035
Merged-chr9-48422478-8	40.5785966840825	0.401304195649101	0.260393777669281	1.54114356817998	0.12328184824696	0.723222520472742	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58909097797742	5.13567577834003
Merged-chr7-73595449-8	53.1424233078501	0.228241417365071	0.267100810165955	0.854514133533551	0.392820181717665	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91087290413306	5.17327223400957
Merged-chr15-62152866-3	6.73019371666914	0	1.31000486185981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159954229-3	10.0486975668493	-5.29910296484016	1.06461491018154	-4.97748332675198	6.44163288518896e-07	5.67401596586097e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80644614864836	0.306240821987646
Merged-chr10-19062212-10	235.054335382957	0.483123321385438	0.189157777046478	2.55407590916407	0.0106470042058187	0.116437415847098	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.44163254592928	7.89717971308768
Merged-chr7-101363634-8	64.1728068061896	-0.541211579452769	0.212776813731348	-2.54356463921911	0.0109727752591822	0.11916685592264	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31496264378667	5.77699035629459
Merged-chr5-134520331-4	12.3470716049014	0	1.28796126636569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128131507-4	16.902747817177	0	1.28762644462581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180601945-4	12.1407778735732	0	1.28187232944263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37137324-4	14.5339180894257	0	1.2877486349377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51518625-4	12.2487658419861	0	1.28283548227574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100740444-4	9.9234581469868	0	1.29004657453787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97928016-4	12.6478344009827	0	1.28386868625142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87639947-4	11.6672945866567	0	1.28951613559641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39403969-3	22.7113209839172	0.786602889756066	0.314417250690312	2.50178031907937	0.0123570574344362	0.130281425477681	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36220477629345	6.2009048339302
Merged-chr1-177258695-8	62.3528809642629	-0.49818859443388	0.281367998749941	-1.77059436981898	0.0766281788845007	0.509083466590746	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53594388859948	4.96727963662743
Merged-chr16-55526683-4	9.39804338138794	0	1.29084867577434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35971527-5	32.7141735414762	0.139101676681946	0.39165983815974	0.35515940908195	0.722470171841952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03438433753418	6.08657883818473
Merged-chr8-90795598-12	80.9269329923495	-0.393346704370818	0.21607511262548	-1.82041651901208	0.0686955986873772	0.468823247188026	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88102400564839	6.35193403411563
Merged-chrX-100637646-4	13.7830137838596	0	1.29496732706611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155178475-4	14.1545651032412	0	1.28522491893291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73881677-4	13.3955140531313	0	1.29076988149442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122068072-4	11.0359480575858	0	1.28894265023017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30595595-4	16.6314734643097	0	1.29871109959211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57828846-4	21.1806840681337	0	1.30832276672956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118349069-4	11.3390590902389	0	1.28785472860073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130783134-4	12.3768079128289	0	1.28418013417113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13765869-4	13.2484228534986	0	1.28917222321214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72225316-4	16.9428387042501	0	1.2864399632724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58117289-1	6.29388669088178	-1.01963801607365	0.592965551832662	-1.7195569167927	0.0855130132664167	0.551023899507669	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90771808786519	2.90012233499004
Merged-chr12-52307743-10	78.9527101171385	1.06432483069415	0.222705457320411	4.77906937485991	1.76108425860998e-06	0.000127160013218926	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47893199261805	6.60215635127767
Merged-chr18-39517384-4	18.4675272400281	0	1.29702375902113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112251640-4	18.7284690668189	0	1.28804831807352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16895245-4	8.85564600169695	0	1.284370385546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33898580-4	13.001812122694	0	1.29325076551161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3327534-4	11.9003731839797	0	1.28981062822658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94122728-8	52.8066390976623	0.145750856064155	0.212330762378219	0.686433065240601	0.492440059622857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79094486781418	5.92495031753996
Merged-chr6-82702867-8	35.3700136292062	0.0832670438567941	0.242066236897615	0.343984542924972	0.730857910535895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44243814794548	5.48095147558182
Merged-chrX-73580349-3	8.69832784582897	0	1.29571203580871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105696191-8	57.8287504806515	0.407513941831384	0.284246061783321	1.43366609646127	0.151667571654586	0.835797822556403	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84032167389135	5.28909029629514
Merged-chr6-97420255-4	14.8694483978734	0	1.29778846943949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88813104-2	6.87432364400979	0	1.30605509846698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90426397-4	15.4025094938667	0	1.28528684709722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191253835-4	15.3802136433122	0	1.28927399899144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25024800-4	11.9076255682966	0	1.28691247391299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-103632677-4	8.86144783752765	0	1.2991816543312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92021177-4	11.9304905333713	0	1.30019824301805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87661133-7	122.009697628314	1.02388603152938	0.2343590905278	4.36887696237208	1.24887098662551e-05	0.000602723216337008	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8293956642588	5.83061298018164
Merged-chr2-131254145-4	10.0106811857172	0	1.28774563145153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94566046-4	9.64571618822236	0	1.28661480963048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59601067-4	17.4651212376294	0	1.28896682314292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155246783-4	17.9906588323595	-0.0192933850784988	0.618510050834465	-0.0311933250760745	0.97511536314332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82349365324801	1.9450324219075
Merged-chr19-11234440-4	12.5602628443236	0	1.29313431270651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8803284-4	12.0887632364546	0	1.28965541397453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150621819-4	15.3404013633133	0	1.28552629119909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20107852-6	36.8662686501019	-1.96125576058528	0.404381436788427	-4.85001432350964	1.23452559256123e-06	9.54753215191129e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88729179255375	2.57431100767806
Merged-chr10-13935868-5	45.9701229063166	-3.07628863516835	0.586048718252635	-5.24920290644202	1.52758744813951e-07	1.77284207632751e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83720363650405	1.40264952818025
Merged-chr7-44745355-8	42.9451399851866	-0.585251099611545	0.210719066026152	-2.77739983689426	0.00547957259933487	0.0699395942721574	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18358739326883	5.57287747492844
Merged-chr9-48407738-3	26.1130608069469	-2.20653250058848	0.831467045550792	-2.65378226641177	0.00795951682532494	0.0926969500031516	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96863237167124	0.73596151290311
Merged-chr8-11452201-4	12.6717394036533	0	1.28527013606809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60743361-4	12.1600453051422	0	1.28289907352368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96430361-4	11.2409594091246	0	1.28829698812208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92066926-5	20.2554964493876	0	1.33283828467588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83984209-4	15.1186462592198	0	1.28875328845376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132656793-4	12.4574189015497	0	1.29378393565943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70877919-4	12.1482559336884	0	1.28589065601329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32359274-6	29.6702721772086	0	1.28858494061717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162574323-4	24.5660476231543	0	1.28860892960794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94549715-4	12.8437388334345	0	1.29079357371181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30873708-4	10.308877252047	0	1.28491159239506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56023563-4	22.083575791002	0	1.28687678490172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90245823-4	21.6417364530789	0	1.28157387141696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113738074-4	12.2721327066076	0	1.28323082535365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26584603-2	7.2122525748856	0	1.30315544611678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147046465-2	5.14435362360777	1.95494708826898	1.32304114547482	1.47761624417764	0.139510523911952	0.787467608508645	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr19-53404843-4	28.5089743394678	0	1.31934122677817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154061559-4	11.0894292232095	0	1.29725752350949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87207854-8	80.2904239530508	-0.43473819137743	0.188040543548365	-2.31193860203671	0.020781067062178	0.193083976716207	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.96701739119246	6.57071273889953
Merged-chr16-91612723-4	15.4125100097539	0	1.27878750461201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-61998984-4	19.7040518194886	0	1.29041165713423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66812705-4	11.3352216031971	0	1.28366034447492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27192421-4	13.4837915979875	0	1.28805313159343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40495855-3	11.6591097663301	0	1.2973112480703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6340590-3	10.6189926427787	0	1.30417018480415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30513825-4	12.1804555304104	0	1.28957870780249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155412938-4	13.3952959347391	0	1.29346372787051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70457205-4	13.5504171586583	-0.764936178155877	0.914734409208811	-0.836238552365707	0.403020713986468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19584631645522	0.869764003783424
Merged-chr7-141525447-4	12.2159858542519	0	1.28441555209565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32967518-4	11.2732639891917	0	1.28016562569233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69538722-4	11.4388399983556	0	1.28397523614899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123990840-4	16.1973661783004	0	1.29370736048691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67072071-4	12.6191543492111	0	1.28866178757039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114683932-4	13.0727545582423	0	1.29425199228228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69156136-8	57.0270274275964	0.621788151448179	0.258051987165908	2.40954606967788	0.0159723793636841	0.157164749570742	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10793134982838	5.6829863795853
Merged-chr7-49253203-4	24.0319892639603	0	1.29687167218004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54492758-4	11.3386719001524	0	1.28445041844143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99540826-4	9.63052097057411	0	1.29480965436256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53644194-4	8.50794578618389	0	1.29558080536539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61921243-4	9.96785235362418	0.536602697169747	0.851711347717745	0.630028822097572	0.528675727085396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17099483890549	0.898163539755574
Merged-chr18-20734399-2	3.4101184387199	0	1.56414799514218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88256588-4	11.7787069336399	0	1.30980711769739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94505747-1	7.08106732058069	0	1.29419051643356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17616841-1	2.24816259576106	0	1.44745137476982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72788976-2	5.62517364529578	0	1.31946374165883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61423019-4	12.7470824997319	0	1.28522320515157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66851641-2	3.09224858779656	0	1.33621948123463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64084510-4	14.3479327360763	0	1.28869173054893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-71785167-1	2.97017511267999	0	1.44386408664792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122955794-4	14.5324236331234	0	1.29133375130107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112950548-4	14.1813974463482	0	1.28636861021614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46963601-4	12.1495828090377	0	1.28856963876705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153250791-4	10.5600879767893	0	1.28667209485501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40956687-4	12.5440766644411	0	1.2940642982329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35131589-8	36.6827650436742	0.565501434335727	0.277913476372027	2.03481112797396	0.0418698809434891	0.326339365473907	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16073694809693	5.70504136677613
Merged-chr4-63410212-4	20.1771285479621	0	1.28963670968664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41321401-9	94.9773534070658	0.445536024456045	0.227525479991516	1.9581807913235	0.0502088022623085	0.371904828001906	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2177654448008	5.63495330994224
Merged-chr17-17910272-8	105.390865687668	-0.539473195683485	0.249892500169118	-2.15882107433552	0.030864050859813	0.262336403158863	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74986159315492	5.21133380771546
Merged-chr2-144337922-4	10.5808942714766	0	1.29251932933802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17013135-4	8.5533736481634	0	1.30681401854433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44704326-4	12.0898087391341	0	1.28694500599881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111577646-4	9.36307202538918	0	1.29179426872041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122598620-4	11.7690998417983	0	1.30086245092829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16099966-4	18.7546443047729	0	1.28907316699861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6384743-4	15.1802814083807	0	1.28901081165034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153914064-4	17.1814932719773	0	1.27949669068431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88746052-4	11.462997008286	0	1.28995294182766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63595821-8	64.6031667687539	1.22762734510792	0.224527141774718	5.46761222453752	4.56138412532753e-08	6.42388377270803e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89247230864882	7.09562466803976
Merged-chr6-50114454-8	46.5844883761214	0.15028668384783	0.230009424603968	0.653393590747833	0.513502569685904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13352702265899	5.33599813804044
Merged-chr17-78366281-4	15.8534441588987	0	1.30509431617845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-148904277-4	10.6608712267011	0	1.28498117971241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59407947-4	24.1930812925001	0	1.28535103435943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20714009-4	9.07340806986687	0	1.30020323506417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32472536-4	10.1458885120332	0	1.29612967946808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100872164-8	62.3385952488087	-0.872015088546456	0.245887701488775	-3.54639570530235	0.00039053929558961	0.00911066135460063	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30651781523099	5.39086950367052
Merged-chr14-121894659-2	6.93661698394884	0	1.3002388995813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102037003-4	22.6959431329488	0	1.27749643863383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-18624013-4	15.7387543478077	0	1.28871902164857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50702539-4	10.4367139862582	0	1.29312169494531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122261438-4	19.8229825495309	0	1.29223252216737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62675910-4	9.65374963302421	0	1.28264137948615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130417452-4	13.0051721348787	0	1.30200262817402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82971272-4	21.0514375888986	1.02935151095796	0.533933340108228	1.92786521019517	0.0538718940220362	0.391189330677184	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90112109137283	2.86738604325439
Merged-chr12-16877746-5	24.9412493701851	1.1256527647746	0.734071263308474	1.53343799306523	0.125167973616351	0.731398229807212	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21190027973509	1.44027592657175
Merged-chr16-58499802-5	26.3059694069713	0	1.27595029404091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47873604-5	28.0573103527955	0	1.27853611019394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91367280-4	13.5208631464657	0	1.28545061048507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25143647-8	97.6564127337712	-0.768069663591812	0.22021408058995	-3.48783175687116	0.000486954388256851	0.0107756591449482	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.33816376137374	6.54632541614824
Merged-chr17-64579965-3	9.42163955305132	0	1.30591728807291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22027477-6	37.8271937150259	0	1.27963093211934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123112951-4	11.0135311712027	0	1.29451487544442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50111297-4	14.5294860314033	0	1.2819342740142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180705320-4	12.0285125047504	0	1.28819180447092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99523111-4	12.446454908656	0	1.2856421118088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67559758-4	17.3971810424328	0	1.30330760197091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50687502-4	15.7215436268596	0	1.2897715721578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41552847-4	12.9427970934448	0	1.28578322970043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134747721-4	11.1447833295032	0	1.28337960644084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79506876-4	13.0527301589481	0	1.29224346009655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5092967-4	14.5934393486343	0	1.29549895953093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126996944-4	8.19427735843842	2.45474496976092	1.20413155455668	2.03860197872206	0.0414897675983792	0.32434386331902	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr8-22658070-4	15.4752178533584	0	1.28923857466876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143832459-4	13.2056674179944	0	1.28250147198009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30495985-4	11.5927269462616	0	1.281710534318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119826376-8	45.6987427555907	0	1.27615845206487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66226057-4	9.39520979437925	0	1.29486104978841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8956995-4	20.0636765392814	0	1.28513623803096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50111430-9	66.802947747845	0.162170032538307	0.205950019688919	0.78742421478405	0.431033576241983	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39698096348747	6.57729401991766
Merged-chr4-9634301-8	39.1001258704768	0.726808584578064	0.234213951782526	3.10318227862415	0.00191451682445258	0.0314257765412405	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88036546418544	5.57019036727595
Merged-chr6-119358326-1	3.98531445434236	0	1.38558764223279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82913475-3	10.935260707799	2.23591640404412	0.902664733626327	2.47701756892799	0.0132485380254293	0.136897369672628	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	1.69736543272236
Merged-chr11-95849975-4	10.6636880313478	0	1.28736130510412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37511089-4	9.11860682055223	0	1.31014667421642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21728563-4	16.5915086077406	0	1.29849083995044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83410365-4	16.1779331783048	0	1.28440377384285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148805933-4	13.7906123412948	0	1.28620528170902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99323795-8	73.688457993817	-0.95256576773798	0.226428464919641	-4.20691704144196	2.58878119004994e-05	0.00108093607440897	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19432998678442	5.22564483235229
Merged-chr10-10468869-8	46.1286914723015	-0.456321820018514	0.242621129476938	-1.88079999875646	0.0599991303467285	0.423768176787432	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52556438775102	5.12750328226545
Merged-chr11-68867344-2	6.5190663843191	0	1.29704714376968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24164318-2	9.48083877277357	0	1.29171472696653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28702961-4	15.8800907835818	0	1.27886785762845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13786179-4	15.1796963960984	0	1.30399733515375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8649822-4	17.7280175333623	0	1.28139160329203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43856540-4	24.8762023320529	0	1.28272036946171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71179522-4	13.3421103842886	0	1.29280315129914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119709429-4	19.0223699991441	0	1.27904587575431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57854480-4	10.1413962149075	0	1.28647080636894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45415194-4	20.1374968628475	0	1.28281121959479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6165984-4	13.0034589228879	0	1.28589101730527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78237957-4	12.6536462020956	0	1.2828823894808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146156385-4	31.5099656814266	0	1.29101069001378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90789794-3	12.3890213132116	0	1.29101628030325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62736666-4	11.9523302939813	0	1.29928563526027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8718512-4	9.5144984692	0	1.2953448093553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116975195-5	28.7492051702977	0	1.28649360306694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47234766-1	2.58160085483761	0	1.43022329395803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80936603-2	3.19887117579754	0	1.37894934195028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72837478-2	2.8164710806584	0	1.46141413616252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68105464-8	72.889157942832	0.295513091666462	0.187374360656578	1.57712661770242	0.114766393676592	0.68689547180716	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.50264027285133	6.81929377111477
Merged-chr8-126778851-8	74.5610448739867	-0.168598096909917	0.225139526246348	-0.748860494293823	0.453941293597424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69555749984828	5.43641148418704
Merged-chr7-97136595-8	58.9059403000839	-0.509045226991072	0.267956419440215	-1.89973141175164	0.0574683759002736	0.411273492489473	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01052631334407	5.40054134352949
Merged-chr3-69679946-6	26.8629894811744	-1.25389712800187	0.402416969157044	-3.1159151430131	0.00183375032296368	0.0303593231832746	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7837178144529	3.63303927324872
Merged-chr14-54757211-8	56.0698767728727	0.276732490753037	0.300280300613322	0.921580570512987	0.356747396961452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15637990347298	5.05413144295671
Merged-chr10-81303570-4	11.5200533223552	0	1.29126518566158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22347691-4	12.6018169076078	0	1.28212559337916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20713604-4	11.803093160733	0	1.28365787144921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68249619-8	81.6820409732105	-0.504396312532912	0.264456090602458	-1.90729701624132	0.0564821363747761	0.405680554357674	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11978148239429	5.53557862634669
Merged-chr16-50046163-5	19.6063248505499	0	1.2791879504212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117386737-8	62.4009395030239	0.867232051548656	0.232966629192263	3.72255912598085	0.000197213706952625	0.00540608911547864	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62449207053621	6.54053057262515
Merged-chr8-71296426-6	38.2889101016485	0	1.2780850214293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43855998-8	69.8059427306042	0.388746422681444	0.263904975783835	1.47305453990328	0.140736330058178	0.79226018469863	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4410269028912	5.75732128547604
Merged-chr6-113714486-4	12.3890200880915	0	1.28197989784506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78144335-4	11.0569338651595	0	1.28395870241993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34958559-4	13.5393056847829	0	1.28522631535795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94849552-4	14.0317830719918	0	1.28610463093119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97821640-4	23.7951964011122	0	1.2849300302565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62858490-8	62.6992742092292	0.0844751803641091	0.236259173000916	0.357553018116176	0.72067784292238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48321962542187	5.54212592424802
Merged-chr1-51494001-5	15.3396472372409	0	1.28170166083614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5986020-8	41.9167496591998	-0.957582186781465	0.267985933698521	-3.57325540772123	0.000352570567457564	0.00844066813010524	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97909202921063	4.92258005283017
Merged-chr8-119784474-4	9.82805294688343	0	1.29832180190301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75667428-8	25.6497963409748	0	1.27826523895872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29498084-4	10.4563514227489	0	1.29168392485194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102647271-4	8.53055952785756	0	1.29189546456821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47282154-2	14.7905529435294	-2.15402575951748	0.471036884607013	-4.57294498564499	4.80916442968679e-06	0.000281342577280495	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80069706377927	2.81960882153758
Merged-chr5-150216233-8	55.0685359303065	-0.252883838974871	0.25117870353285	-1.00678853508692	0.31403640529992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08160551090956	4.77660575526781
Merged-chr9-16215166-2	11.040925144912	0	1.29672212739692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164456988-4	14.416955719901	0	1.31631344651137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177714217-4	12.0050788841937	0	1.28619274821227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19059480-4	9.32412430687814	0	1.28715707858516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154677261-4	19.2239966844869	0	1.28135472638398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111094808-4	11.3074812743766	0	1.28772961178139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5572951-4	9.04700912456368	0	1.28594327048722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90034124-8	60.0553283867545	0.733746762932226	0.245822787200089	2.98486064408255	0.0028370754241606	0.0425893707023198	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91834382353418	5.66481950944925
Merged-chr2-154314100-4	17.8742866083026	0	1.30202889127184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58482810-4	14.3922662446052	0	1.28352741380991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107683832-4	16.9778434658286	0	1.29340241189012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43788576-4	13.4414956108003	0	1.28656392539543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134083818-4	18.2774362481258	0	1.29515184906325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9769757-4	9.90373121928924	0	1.28715995139322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9880565-4	15.0686719512328	0	1.2913492528157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35055827-8	41.1023698908646	0.364676101626722	0.255639358421236	1.42652564878456	0.153716668718494	0.844311123315014	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96145831198921	5.31169158095631
Merged-chr2-154732914-4	16.070870952005	-2.32060854039127	0.473879965510136	-4.89703872138405	9.72916724729118e-07	7.85861758889357e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04822691822644	2.40436455841047
Merged-chr11-97127195-6	22.0220883386796	0	1.28745596962682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65533072-4	10.2324952531485	0	1.29513655205437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119004080-4	10.8310967159871	0	1.28968479179047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124193181-1	6.8154166702708	-2.53594672460967	0.637577238053245	-3.97747374475419	6.96513105856594e-05	0.00238767534375275	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78709218303855	1.99468681090207
Merged-chr7-63912185-8	57.6773050201867	0.881653174282809	0.204074531694519	4.32025087580534	1.55851914596168e-05	0.000721267649518498	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22574276354939	6.12842557728031
Merged-chr14-103898795-4	12.1723003464569	0	1.29464656640621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46408193-4	20.5002665673969	0	1.29818115086481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124059844-4	12.6371581491191	0	1.29415872953322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45013504-4	10.2533004606903	0	1.29035514412512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101976168-4	16.4111855863571	0	1.29770670356705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87379089-4	17.5067498805508	0	1.28918926242391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55147658-4	17.8393607039381	0	1.29132350476795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46462182-4	17.1055607566528	0	1.28253210398991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106821167-4	9.79498252626239	0	1.28778807530313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74260781-4	23.7288322536852	0	1.28308687946715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140912433-4	12.1602773262162	0	1.28950578275155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32509472-2	6.05159859487886	0	1.34216048863908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17838138-11	166.390687456173	-0.193409371042117	0.245139472467174	-0.788976859155215	0.430125531758287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9001137317007	5.69813619149018
Merged-chr16-17410411-4	13.8072339039497	0	1.28063181763763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49190941-4	18.7136275235613	0	1.29864926612094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66453584-4	20.1395671358408	0	1.28604480409949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80085845-4	13.5450012526027	0	1.28287057264462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37854076-4	11.1088394463245	0	1.28624209850043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101177999-4	20.3644056519548	0	1.28202587341149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140678822-4	10.5866759663153	0	1.2866157148752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191557326-4	12.2917203902392	0	1.2909742076437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25044311-4	11.1683605825082	-0.808962475306713	0.897966828899258	-0.90088235920513	0.367650871612339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62489741718091	0.683637474991079
Merged-chr2-66120175-4	11.940415344763	0	1.28773816523588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70111040-3	13.4089639850095	0	1.28815924084444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99100664-4	17.8390750768828	0	1.28984778984768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127378301-8	43.7776228926931	-0.107533692702273	0.260838635899628	-0.412261367382907	0.680147861556786	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4227906933951	5.22103273410248
Merged-chr17-80553392-4	11.0042899128353	0	1.28549129078928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105779510-3	6.67074354112554	0	1.29215748122116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114528145-1	2.40171205308904	0	1.47596855856607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61029437-4	12.5343092913396	0	1.32243251374986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21474825-1	1.45855648138616	0	1.59051359079663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-98437033-5	19.2974260922427	0	1.28155238847308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10033273-2	6.37016444448668	0	1.32568641305047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95851840-3	9.56406022738898	0	1.30104169623503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37656555-1	1.42752636632545	0	1.65444738439328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80065221-4	12.1218078182845	0	1.29353861443382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51330510-1	2.55473390958723	0	1.40678701092684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84360305-2	2.25371212188239	0	1.6149642324353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84531834-1	3.7597912468522	0	1.33101835993942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78587485-4	12.4538914012237	-0.734406537107798	0.862617390265276	-0.851369964709325	0.3945638708084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43164043171053	0.666688015277142
Merged-chr10-125321748-6	31.2517212751753	0	1.27683692122963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11550537-1	2.11815321169799	0	1.39572566331879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86950793-4	12.0730305213014	0	1.28662349030914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78463539-4	9.84508816994849	0	1.29474553160778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38520109-4	17.1972973485856	0	1.2798975493044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39493277-4	14.0109241413266	0	1.28560447176173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6179948-4	22.1083064232767	0	1.2848417095732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65927926-4	16.2684079021705	0	1.2865261090861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38202461-4	10.0366267338677	0	1.28757028048328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120914043-4	12.7519514108405	2.59218047658426	1.07846024479601	2.40359391001434	0.0162347965532321	0.159315064659484	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.13132003301738
Merged-chr13-65241049-11	122.743077932742	-0.503446556792454	0.188335701130348	-2.6731339505515	0.00751462377589399	0.0885954930201531	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16193267635634	5.60653704662948
Merged-chr13-89505046-3	6.94999658942897	0	1.30995211471286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143706893-4	10.7295659650441	0	1.29567982178682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25119288-4	13.4951686340007	0	1.28233606436658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84847713-4	12.3372107376414	0	1.28847526861632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116081987-4	16.2496922114594	0	1.30150004347059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45628612-8	45.7653552548275	0.560716526318117	0.237702788423546	2.35889755453358	0.0183293150239323	0.175109271864602	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20745400965625	5.80890955914134
Merged-chr17-23983094-8	68.1903695238614	0.216175824432264	0.227368609614028	0.950772513405594	0.341719868602648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24734939189359	5.49064546468508
Merged-chr1-150372116-2	4.22076102690467	0	1.33394665627338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50560982-2	5.44901500645563	0	1.31376054742349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145750551-2	4.98967118188713	0	1.31564306806229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100370496-4	12.0349458186016	0	1.2897082828784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91305959-4	21.2052047463514	0	1.28270486407792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73041117-4	12.1729881764708	0	1.29687746798859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115314749-4	17.0676956953508	0.964300243505277	0.687413820761249	1.40279437855556	0.160678163799156	0.870692038445943	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38097909314006	2.15292080626044
Merged-chr2-167939750-4	29.0518717719686	0	1.29743218461578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82761934-3	11.1286173369752	0	1.28161070373104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94373277-2	5.057915080926	0	1.33829391585492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77112936-4	11.076143742298	0	1.2945382449101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149989173-4	19.4809127569008	2.8153882648349	1.10436486842625	2.54932798509508	0.0107930740911447	0.117606173013163	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.07938469868934
Merged-chr10-13184283-4	11.9029725918961	0	1.28684979585818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149380286-4	13.9176992412654	0	1.28182539084438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43882076-10	124.382891429524	0.915707160545294	0.236086075956971	3.87870041396339	0.00010501598910461	0.00328972906233453	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88329082046209	6.79862547819599
Merged-chr14-26675961-3	7.85590123052971	0	1.30908779997709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9059623-6	21.8584767095119	0	1.28592592040119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45664460-8	49.2980466455701	0.556653087156047	0.252324642361535	2.20609878585884	0.0273770837178915	0.238785759827728	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94779014690474	5.42412019417598
Merged-chr10-67049028-4	10.7011160867569	0	1.2839649972271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60616339-4	8.99917724483728	0	1.2909459416561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56962624-4	13.8976555713952	0	1.30717303938596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79228201-4	24.9672603701485	0	1.27878288046635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113844084-4	14.5267506962868	0	1.28989865442903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153350691-4	11.9975478840198	0	1.28945863334763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23696044-4	9.23826431805118	0	1.2869881807915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97445341-4	19.5004722876647	0	1.31429462483279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26504286-3	15.6966875564824	1.62846995791105	0.821458581759727	1.98241274005872	0.0474330648592347	0.357114368176997	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860429154817231	1.6342703608096
Merged-chr8-90938625-8	48.376979845464	0.715843812763979	0.217226564855322	3.29537878224401	0.000982890974971189	0.0187936540238954	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27144797682992	6.00806060968515
Merged-chr15-73732711-5	20.7022727647322	0	1.28468376173624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53250881-2	6.17233645230132	0	1.31061300191369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19117137-4	11.5936808911943	0	1.28568504150927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90689904-8	88.0577535075579	0.0131034178327291	0.263642493979851	0.0497014636560469	0.960360290074043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28884730957746	5.23970617003387
Merged-chr15-38468439-4	18.6928714245286	0	1.28454859183759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11115413-4	22.6618822367267	0	1.29352542288329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10441563-4	11.4624243173539	0	1.29542763894245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69503816-4	10.747041094605	-2.138090702205	1.09905634857877	-1.94538770006638	0.051728333991448	0.380015841314869	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38272089293872	0
Merged-chr5-3358926-4	12.1701398590426	0	1.28286891509219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55815993-4	17.9598721055627	0	1.28144517740531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116756544-4	10.6017087927734	0	1.28705612586332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69401126-10	99.3095952962982	0.618368859097155	0.158477613067073	3.90193193303234	9.54279948003297e-05	0.00305229454146958	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.80406678431441	7.41230321004031
Merged-chr14-45669878-8	43.2328137796612	-0.259562390933667	0.263801422767182	-0.983930974332705	0.325149452859997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5295027975694	5.14728829249135
Merged-chr8-71310595-8	44.1964730299191	0.786787212671079	0.269424742703402	2.92024854427426	0.00349752322901739	0.0496522165812232	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70747246541633	5.46161182330283
Merged-chr8-80913158-3	17.7345857110362	-2.15399332562201	0.490605145780959	-4.39048253803622	1.13099397950505e-05	0.000561168812336653	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94274136209848	2.4360226934973
Merged-chr14-66846498-10	97.6123720078648	-0.0436624434299842	0.244984726021074	-0.178225165866986	0.858546146607164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.44252217026352	6.36402671773185
Merged-chr1-189707200-7	38.5890930459613	1.57834546213436	0.326651937751752	4.83188764468272	1.35244577025967e-06	0.000103123595453196	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06928597665124	5.72739562070572
Merged-chr15-59807955-10	106.943160883334	-0.181564941183252	0.210533313949315	-0.862404803198808	0.388464798322892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40965769544517	6.18623691822554
Merged-chr7-35086745-4	10.0786560648422	0	1.29565757322154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61696610-4	17.1247524794865	0	1.28335180485231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-3832156-4	14.3589763619708	0	1.28502619916216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67595455-4	17.8548923922203	0	1.28345312196343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21187492-1	4.61453590452923	0	1.33136635102325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69692379-4	12.310238050073	0	1.28865633706608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16112649-4	18.5715329267316	0	1.30227588286908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79885491-4	16.2429369091063	0	1.28286450210786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59295454-4	12.8773098205498	0	1.32317236556194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3686670-4	19.4784820404327	0	1.28219557592031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71294885-2	5.05910988114527	0	1.32038850228585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83655853-4	13.9860629722725	0	1.30124091640037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137817653-4	10.4212940996302	0	1.28216136169383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102520399-4	8.32698936317182	0	1.31081034811959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9893287-9	75.327586497965	0.709820763451322	0.186709516637142	3.80173853071889	0.000143684316733899	0.00421986308372734	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84279264087229	6.56696263786024
Merged-chr5-134214586-4	13.7412937140202	0	1.28318056358205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54941333-4	13.2411340225554	0	1.28579748020053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21841118-4	15.4300340699693	0	1.28655416886925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55817116-4	10.1165884986109	0	1.29202899904041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50536574-4	18.4344086316514	0	1.28493521386866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90199232-7	34.5816497756012	0	1.27364250537211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92216409-6	48.9700890224051	3.28045840388089	0.446991042120231	7.338980191461	2.15227460000795e-13	1.9266100823578e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0733963361695	5.37407990370662
Merged-chr8-115276476-2	5.16283973030826	0	1.31228262574233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121769011-4	11.4116445943112	0	1.29527355696036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145720357-4	10.5514218771637	0	1.28424460046738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129019027-4	11.9034407980165	0	1.29127342016789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22814578-4	11.70229566381	0	1.30006656867678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77737529-8	52.4643434534879	-0.224927213626556	0.217611006229114	-1.03362057611065	0.301313576316021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97798284201407	5.71646416404667
Merged-chr6-24645501-4	21.5271042127756	0	1.27802425873325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89120569-4	12.3901785280678	-6.05434210912438	1.00825319596804	-6.00478345452853	1.91587431465622e-09	4.43952918317467e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91547685401998	0
Merged-chr1-191277873-4	13.3327210675941	0.429166265987644	0.544561788753619	0.788094711841441	0.430641308168001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68034188737041	2.8692000926858
Merged-chr6-119883353-3	12.0299482202453	-0.635495305734677	0.501756532083462	-1.26654117106535	0.205319399121431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32512438328498	3.69192818927546
Merged-chr2-163719372-8	60.763550990219	-1.34795326629007	0.20490342133345	-6.57848101080009	4.7527855615182e-11	1.89375320306688e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.66635744398758	5.33819131011522
Merged-chr1-80613569-4	15.5104395880834	0	1.28718660620503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53509292-4	8.10089729779775	0	1.29156539493618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152122250-2	6.58667645025074	0	1.34870386950517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11197169-4	23.5432859971491	0	1.28375908649584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142391150-4	11.7054082372587	0	1.28878863359274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109045712-4	10.1041887889948	0	1.28769306614243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68874656-4	11.8162263307477	0	1.29308628429018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-8168401-3	15.0029520035238	0	1.28666410883301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100588331-4	12.4017196234222	0	1.28462421789901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77911656-4	16.0355504948234	2.83162565510144	1.11713406713475	2.53472321577666	0.0112536204549644	0.121349683539621	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr19-38015742-8	74.6510401003774	-0.471555366557349	0.166483834305179	-2.83243936881552	0.00461943258739237	0.0612543510259216	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.00450835172973	6.54533476478664
Merged-chr7-24389599-8	125.790702723527	-1.40296390622515	0.158719856130807	-8.83924633266368	9.63664398235561e-19	4.49797241193578e-15	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.64946955246595	6.224185908255
Merged-chr5-123080312-4	11.4151012407483	0	1.28787052777789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10914513-4	15.1024804718245	0	1.28956127805393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51022662-4	11.943700589261	0	1.28692378977364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31757869-4	11.6149237009885	0	1.29060891511263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49272583-4	10.1582541883616	0	1.29061584005712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59615668-4	11.3061034084585	0	1.29125300123363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78373414-4	10.820209843176	0	1.28528007405682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81088603-4	11.0439159886316	0	1.28718224954062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63020828-4	13.7260514219448	0	1.28791214889602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138014319-8	51.5683197285487	0.3526637939937	0.221305743580146	1.59355915616344	0.111034808735218	0.671312549345754	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17911401526681	6.54226652607505
Merged-chr1-105790503-7	40.9474949153006	0	1.27461455465434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9393606-4	12.3696502187621	0	1.2883246789822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167337337-4	15.9125852379869	0	1.28251470356516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42912391-4	20.4145582488019	0	1.29224334757114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82874354-8	97.3564869184777	-1.22543704806422	0.196120350796397	-6.24839310702852	4.14696880520093e-10	1.2097670693958e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.41586475326614	6.16864251025269
Merged-chr3-27439844-4	15.9689517517873	0	1.28741474030781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68058556-4	12.6107653474665	0	1.32251654464129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52024939-4	12.0208192792736	0	1.29375230990444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9828800-4	17.2415791561928	0	1.28675166244337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92318356-4	9.50494949041689	0	1.29219290040721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116638125-4	15.225457810095	0	1.27805205959187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9535007-2	5.1118561058988	0	1.29957008255143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126566159-8	58.3737099671604	-0.0271580988720958	0.226936271636092	-0.119672799223765	0.904742348548313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56664074113255	5.53141951582749
Merged-chr10-80692618-9	47.1865264717292	0	1.28102206312882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167754812-3	7.99162438813078	0	1.30158429285774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4977623-8	33.0544583739547	-0.186702243663972	0.363509380498182	-0.513610524735567	0.607524319716367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84098010996224	4.66589917582395
Merged-chr7-111373568-4	19.1065563490386	0	1.28345804266455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116893127-8	43.3461356337083	0.589032950151279	0.244374007034585	2.41037480744798	0.0159361395655259	0.15690266325883	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75850588328539	5.36633785013889
Merged-chr13-110569267-8	76.6952662706665	0.0169211048211604	0.264894353672006	0.0638786919637868	0.949066818970621	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00980221595008	5.00568449868812
Merged-chr1-176068134-2	8.09233279459561	0	1.3358555512932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149031409-4	21.5353108270765	3.38273623409212	1.0523106884385	3.21457937399807	0.00130635792342275	0.0233580938583316	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr11-117087160-4	8.87760388689785	0	1.29002363108446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32312417-4	10.2100634877149	0	1.2874498034207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52589245-4	12.9102133929533	0	1.28563061168296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84334058-4	14.6570299505482	0	1.28254110939444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121573415-1	2.40706602575237	0	1.38777134956597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-110968716-1	2.19763866103418	0	1.46426775832326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81241244-4	14.1942269023782	0	1.28775462323592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72401407-4	11.7568917257933	0	1.28918560193443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-69689200-4	9.85260187322855	0	1.28162855689677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40992281-1	9.46732807139903	-2.90108153281874	0.611370932402335	-4.74520684426257	2.08293377068094e-06	0.000145100055788898	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20078267991089	2.25887686095708
Merged-chr5-64701949-4	12.4740737354879	0	1.29200464902178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27563953-4	14.1984833533937	0	1.28818208023675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37262731-3	11.8404748269376	0	1.30544873901974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-18925096-4	19.5555472310671	0	1.28852862319741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185187494-1	5.84546771571812	2.21217216454308	0.772504566581327	2.8636363592424	0.00418808507167429	0.0568143257408404	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46465229860512	3.24934517694232
Merged-chr12-35885361-4	13.6914137678671	0	1.29084404746348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29008342-3	14.5368265379494	1.12062371218611	0.441296652894483	2.53938865123018	0.0111046387330255	0.120199390864384	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57601994305448	4.65009241760564
Merged-chr19-17224919-1	3.85648028031866	0.32057190414636	1.18761158916956	0.269929922434086	0.787214166559921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58888361880484	1.80659218898308
Merged-chr2-12084532-4	14.6012421183362	0	1.28547846893827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52476712-1	1.80125173804127	0	1.69726309317973	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29917572-2	2.47832017697555	0	1.54242788099042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40932463-1	1.77121264640294	0	1.52022291497655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118092404-2	10.0874017197788	2.44483368616348	1.07225988061095	2.2800756890862	0.0226031998075711	0.206317739157081	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.34805514843284
Merged-chr17-27935308-6	39.4649836201009	-2.6214633006787	0.425026419891152	-6.16776552702312	6.92617446665282e-10	1.87023882933015e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50416536111533	1.7337995627857
Merged-chr11-103418699-8	64.4924714245439	-0.882616507159652	0.238393883942462	-3.70234543170024	0.000213615503518093	0.00575388239608134	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04453203449457	5.01548385071419
Merged-chr8-68914720-8	47.0270308812311	0.696011631860831	0.251049394154144	2.77240912771723	0.00556430528750541	0.0707313672963069	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91263114826282	5.58930862485868
Merged-chr18-3891074-4	14.397104335057	0	1.28314571448708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53137550-4	10.7878079371018	0	1.28875671874556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59121225-4	9.59032387680351	0	1.28860065335004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34313528-4	21.1564353966658	0	1.28262924338195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9573822-4	11.5100209335834	0	1.29534519649314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38285739-4	25.7245713017794	0	1.28464773858054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12008278-4	16.3170175717374	0	1.28176871570745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30943501-4	9.31645078103755	0	1.29006688261994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28269911-4	13.6094946549292	0	1.28274254642378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9657590-8	78.991044543138	0.630229279350313	0.255082942023291	2.47068374839729	0.0134855018658213	0.138666184881819	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87879653216168	5.51140290610293
Merged-chr18-60843916-8	50.8099192967134	-0.653225654701851	0.222715665587115	-2.93300272784961	0.00335700942467433	0.0482578738149252	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82721561276209	5.16836973501101
Merged-chr13-81133608-6	35.4594915201919	0	1.27636522865628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79684224-3	13.661384279878	2.59550151019908	0.764052853081685	3.39701828182505	0.000681244154904377	0.0139857306146344	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10450937279159	3.21704889399714
Merged-chr2-12023558-4	12.2629874346714	0	1.30415544825502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99576082-4	14.0718291623282	0	1.29582657662929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67693773-4	14.3522297764456	0	1.29692579039736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77309499-4	10.8499124643809	0	1.29241858679892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103021490-4	10.5293410719004	0	1.29670924988259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34174266-8	45.4277509835244	0.449958609701982	0.280941031945699	1.60161229061389	0.109241371254623	0.663303636745709	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17914094577874	5.62015372924723
Merged-chr17-6828038-8	77.488862083984	0.523201084009682	0.21498162087217	2.43370145730171	0.0149453161109063	0.14919288520979	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8200488692376	6.29381224357141
Merged-chr6-122669595-4	9.00857187026607	0	1.28703468590736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25651475-4	14.8270431051061	0	1.28944782586146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54888683-4	19.551116932716	0	1.28269227928224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103487127-4	24.1011863315965	0	1.27810031204533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145888161-8	37.0963865922971	0.252118512638351	0.270769776652409	0.931117629727189	0.351792720048128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.252434999932	5.45210597343746
Merged-chr18-70522463-9	75.7156578705135	-0.475114874125739	0.267920959657815	-1.77333969963585	0.0761724344362772	0.506732537922234	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.43609360874952	6.01240898432713
Merged-chr4-132760501-4	15.4523929523922	0	1.28125057049716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75991067-4	6.60732275035665	0	1.29915840743203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129413768-8	54.6963549363242	0.4562275034909	0.257702883042399	1.77036243485036	0.0766667833821956	0.509288159692279	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91614734482716	6.52147179216795
Merged-chr14-60435777-3	24.3396868613093	-1.82242511854231	0.479501850654892	-3.80066336772899	0.000144309239328551	0.00423250967377177	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11373818236257	2.73893482823591
Merged-chr13-5888952-4	15.4930165377232	0	1.28231346903607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41552134-4	13.2993168196705	0	1.28996472757081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140814606-2	5.20458496247105	0	1.31664340922916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91278690-4	18.8660188304928	0	1.28898534106188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21068567-4	12.813306755045	0	1.29697057486333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59734042-4	12.2542251727731	0	1.28177724201753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85853483-4	9.33591422500215	0	1.28924302708903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70287916-4	10.1080790481526	0	1.2920157956575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93175504-8	47.8871407653591	0.567499065695371	0.271821338960651	2.08776495570689	0.0368190422074558	0.297585297722747	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05858388507891	5.59799772142802
Merged-chr4-59244926-4	11.6265246056888	0	1.2851436410085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172470173-5	30.5571156590625	-1.16841695235981	0.413306652052559	-2.82699769422349	0.00469866662158805	0.0620782590081465	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14767006714723	3.20191471427944
Merged-chr13-113508539-4	16.0533542978727	0	1.28146489390151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17614506-1	3.51676159897525	-1.30440931560831	0.863880241714654	-1.50994229595908	0.131058148922923	0.754540964230047	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5973537658773	1.52860153008918
Merged-chr8-105332772-4	7.80174836845551	0	1.33244202595168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59755397-4	13.0489519421272	0	1.28243458930681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52145048-4	13.8488561604129	0	1.28279715331006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58276067-4	11.9020860051077	0	1.28355080528917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3421410-2	5.45370626216245	0	1.3602602176087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108608209-2	6.8777305904806	0	1.29746076722973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-42094925-4	15.5376300833312	0	1.29939150593311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57800542-8	39.9056977800985	-0.377284563133083	0.302364881978269	-1.24777904320317	0.212111985343291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60444864538023	5.08124350192955
Merged-chr13-116000283-4	21.8872663670429	0	1.29515558296177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55110650-4	8.9028937564813	0	1.30089425315959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125122715-8	29.308839730658	0	1.27847302797084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70297030-3	7.64572429019381	0	1.30000186284626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-114949008-2	12.1973156048733	0	1.30657364388212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99999598-4	15.0148177518447	0	1.28478957593484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98803904-4	17.5542604151878	0	1.2841520295173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13627767-4	9.4073859094198	0	1.29706480023689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73434272-4	13.5354641740154	0	1.29553464071539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42254058-4	11.4159605347859	0	1.28223117846931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37506286-4	18.96300473091	0	1.30438317037358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32932356-4	13.1840095129234	0	1.3030578269819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-21705-1	5.51833494188588	0	1.37368712986572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64226253-4	19.4710458825434	0	1.30454350787846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87488109-8	44.7275051318278	-0.435686383907398	0.208747451261012	-2.08714588501791	0.0368749494033472	0.29777934301917	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.961071349797	5.52280364920329
Merged-chr17-35257589-8	37.2254289377787	0.331252735642962	0.289820244244799	1.14295927293183	0.253055500977613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13247054198607	5.43473788057232
Merged-chr18-32311948-4	14.386806508668	0	1.29168398598473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95648193-2	2.88849428775449	1.28075053342884	1.39626042456836	0.917271957933473	0.359000147981746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr5-102003635-4	10.2535457875362	0	1.28839217738853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98024598-4	19.1081763969648	0	1.28114668849201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83884714-2	3.32613857107465	0	1.32957613524474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86168350-2	13.1517056413617	0	1.28598952935579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-39373265-4	11.2549337645371	0	1.28909702891132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137831721-4	14.6770925509559	0	1.28380300751252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105976367-4	18.0635786366839	0.961878158253444	0.431689727717427	2.22817013353411	0.0258691718887511	0.22840030271204	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71061539241845	3.75225060332627
Merged-chr12-104271645-3	12.6789494483168	-4.03277950960574	0.876457753814781	-4.60122520686602	4.20013002135226e-06	0.000252494660878827	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71399583492428	0.73596151290311
Merged-chr7-129994950-2	6.61351381198924	0	1.32472791497897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103016084-4	18.3668118228456	0	1.29915347405408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24400369-6	31.0578890974544	-2.21284171939272	0.366479394361087	-6.03810678974336	1.55932861675043e-09	3.73245010220416e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69061304928524	3.43248415910497
Merged-chr10-123360699-3	9.78921073232579	-1.91362741246032	0.656564150140278	-2.91460843856837	0.0035613506049713	0.0503287233201675	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49872952286047	2.12139497612295
Merged-chr12-69446682-11	98.5306369289851	0.707696601308962	0.131495259252699	5.38191722903834	7.36966528281692e-08	9.55516349279952e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.77259233534515	7.46640068402282
Merged-chr4-89381980-8	37.5898665478293	-0.605386675623028	0.248433379222628	-2.43681697490627	0.014817176869108	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85454022251218	5.25949328162796
Merged-chr10-67490060-4	12.9877809906761	0	1.28798502776174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131430643-4	14.4494774815776	0	1.29811759887377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21808740-4	17.108602512773	0	1.2808166743736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119357503-3	12.2746928670785	0	1.28941886513487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35708030-8	52.0945402171697	-0.0212984656937307	0.231291566310677	-0.0920849213547287	0.9266305685623	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76409771994925	5.73306572920137
Merged-chr1-180884468-4	9.84651210499532	0	1.29162138065638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159650830-4	16.8964342260306	0	1.30034319086912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91751503-4	10.0683983816022	0	1.2893452022463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116457937-4	10.1081394512559	0	1.28797490428682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27318398-4	13.4859147145063	0	1.29582834679304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56600973-4	12.8164581445015	0	1.28489899910923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121369637-4	12.6790419082728	0	1.28612680547392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70392794-6	40.000540422215	0	1.2788879153038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4521719-4	11.1340693932402	0	1.28885675224652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75490940-4	9.89214210369091	0	1.29427808462774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9717212-4	14.3614834453403	0	1.29389853434393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59886683-2	6.21635263683163	0	1.3263204231962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-163758011-2	5.53513333981331	0	1.32370572613422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121906571-8	50.2709224451154	-0.0288779329097678	0.246601240234818	-0.117103761855657	0.906777828719724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13008371464402	6.14018253250539
Merged-chr17-10344771-4	9.0219081328485	0	1.28774010992438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52684475-4	13.1661977811338	0	1.29362038568499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45825377-4	10.5413682017454	0	1.2873465974573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135670566-4	9.95294839497071	0	1.29095280072906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88077301-4	8.01976188191727	0	1.30454864133519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83168605-6	19.2240411782924	0	1.28954200422618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45826998-4	11.6242748741967	0	1.28866845800272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5625520-3	16.3690967167907	0.636468675504225	0.507915411427876	1.25309975083244	0.210169406721683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72190624448202	3.18987721073584
Merged-chr1-45861804-4	10.7941600116781	0	1.30019207116075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70546583-4	16.8657733235451	0.0771039779138248	0.74729257481332	0.103177765325831	0.917821886416071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53601963382306	1.31734301959449
Merged-chr1-144241936-3	16.3680751507882	0	1.29196520939994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35740565-8	57.8784640697836	0.772257342018464	0.251478613987448	3.07086686129505	0.00213438300875497	0.0340760791815544	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7528927177781	5.44190123035124
Merged-chr14-33175300-4	17.1042065130626	0	1.28739312960664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146293468-4	13.2820963584899	0	1.28367637283545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3780476-4	9.29763703023711	0	1.28520763195189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21036704-8	46.3893242902021	-0.108155723420249	0.255997137901788	-0.422488018056445	0.672668844635631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67589001108003	5.38082067285258
Merged-chr17-17871869-10	106.937450000911	-0.28026893011337	0.20207836912555	-1.38693186869121	0.165462539036531	0.887856386589027	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.93076760190371	6.62244713266179
Merged-chr4-34466029-4	12.7257992551788	0	1.28948813435746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32738629-4	12.958647554792	0	1.28742499818869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97345356-4	11.2585655626233	1.88844378297454	0.975948460614843	1.9349831053423	0.0529923689174351	0.386563891413119	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.958904680953568
Merged-chr17-26532736-8	93.3159396454445	-0.0808823775590212	0.237908584462157	-0.33997250558181	0.733877233365103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66126926490659	5.53253231575847
Merged-chr11-53795406-4	17.9358106096102	0	1.28730698053015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12135240-4	18.5929878950112	0	1.27898946219078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22357980-4	9.16818581418734	0	1.29796803519508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111243758-4	12.1027058098631	0	1.28578442146786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12424238-4	22.0827007219121	0	1.28088397186059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39493808-2	5.2677092616465	0	1.32200047522061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122348653-8	40.8988182117401	-1.2199995356637	0.305029487743505	-3.99961179061343	6.34464726814538e-05	0.00221118570871588	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94728280127668	4.69968839414707
Merged-chr12-32163894-8	71.5919695651455	-0.613662777896186	0.215513153713803	-2.84744929634837	0.00440711140042655	0.0590315421569884	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12150984257955	5.44110165086748
Merged-chr4-137465326-4	12.418615049166	0.589048960038312	0.606054359559021	0.971940801592315	0.331079999918228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6547693912011	3.04259702247068
Merged-chr9-65200777-4	10.7559889437858	0	1.29256735615701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170160341-8	34.9028588111556	0.0563828699934376	0.244620935107161	0.230490779412391	0.817710427592915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24087883562482	5.36521410314677
Merged-chr12-33314200-5	18.5850256412877	0	1.2960609167129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56313823-8	53.2267240224783	0.899206106741124	0.276983520982222	3.24642456544857	0.00116864413926254	0.0214150925194194	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9763281550024	5.92744766273076
Merged-chr13-60644799-8	54.1320810078042	-0.532771014071932	0.261947613328165	-2.03388382624614	0.041963310050235	0.326911624482747	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56683905698107	5.0676559098257
Merged-chr2-102968449-8	70.0170270269901	-0.782538593653605	0.268736969954961	-2.91191269211957	0.00359223026680238	0.0505900601324286	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45577439228224	4.59823448218493
Merged-chr12-100203628-4	17.8875678137336	0	1.28372386137663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95335896-4	10.2254046875135	0	1.29253397206646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25896997-4	14.885833434482	0	1.27827266898105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21630795-4	10.6672343922248	0	1.28501537731186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64134648-4	11.3763711710077	0	1.30509094398694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4593625-4	9.09490882773132	0	1.30519149911975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87025079-4	9.78852665564924	0	1.28967703627188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23134200-4	17.6352111189903	0	1.28698124173851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61093905-4	12.5296987824075	0	1.28840959806314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108994604-2	4.28826570584695	0	1.32872866396992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71257361-5	36.0269299657813	-0.243097507793912	0.3742891523072	-0.649491192291858	0.516020937604083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50033420274699	5.28743657527961
Merged-chr11-3182665-2	11.3342860998767	0	1.32694413091854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102879720-4	9.36751695444521	0	1.29206211767153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60598445-8	47.4778293263712	-0.629286484286244	0.226988830665026	-2.77232356518414	0.00556576822816408	0.0707313672963069	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77108019830293	5.17147104339279
Merged-chr11-118146509-3	25.0668398684804	0	1.28354329515563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171713546-3	12.5169032873233	0	1.29289474864037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135715789-3	10.4157560145917	-1.35428145592165	0.507426742804516	-2.66892014487968	0.00760955397918732	0.0894019982603334	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65887662214513	3.1302480415236
Merged-chr4-134758677-4	11.3039223987203	0	1.28697901965093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121091201-4	13.1430177222627	0	1.29480510225317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129401448-4	12.5557074813384	0	1.28509983247543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32591892-4	11.400007500678	0	1.28086708664782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50490838-4	12.8335397365008	0	1.28066848402119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149504953-4	10.5525067486226	0	1.28734378682042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5769873-4	14.7432164340028	4.04448952101069	1.00212298456059	4.03592132235559	5.43884415388053e-05	0.00194423802012843	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.01585784396829
Merged-chr7-140999062-4	11.0652128606948	0	1.28343559182598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36648066-4	10.6034952567542	0	1.29169541644346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110692648-1	5.16346576182288	3.36266946367699	0.929044902280118	3.619490786101	0.000295183320836139	0.00737913132492667	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.86081654425478
Merged-chr6-145301875-1	12.0807453559172	0.436612716898624	0.454063554661115	0.961567411470591	0.336266948010337	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87486125977306	4.10610386290133
Merged-chr4-133690738-1	3.03282150097712	0	1.3714534279206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68981046-4	15.1845928019713	0	1.28671382726489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56070853-4	18.846433923605	0	1.30167452571769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70056332-4	14.1771726672022	0	1.28222872381368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65195785-4	18.5559340379485	0	1.29959866050084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9801841-4	10.2784259972159	0	1.28873055512808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5511539-8	46.3894407193525	0.1878227476766	0.2458907240071	0.763846413625498	0.444958774030054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87182147432255	6.05486113376622
Merged-chr18-50096664-8	76.1455154085815	0.115284803498093	0.243161761535719	0.474107453285406	0.635423283912144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33314650854502	5.33539518350439
Merged-chr1-21014638-5	34.1745271509899	-3.59011228522932	0.498278558396313	-7.20503064949039	5.80307952055463e-13	4.30918220852458e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95385501047813	2.22781771998735
Merged-chr7-34448567-4	15.9837394173322	0.478095949213387	0.844422999050629	0.566180634292177	0.571270993163492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08108331753351	1.14490468848716
Merged-chr14-76927531-1	4.69688282249553	-0.0935835686605629	0.71572499264363	-0.130753529110251	0.895970285686011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40785918072127	2.99624464073807
Merged-chr15-73442587-4	10.9332092963515	0	1.28739605763697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43395488-4	32.1110197927132	0	1.2852799623282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105498887-2	4.20789674241982	0	1.32166846013055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48204629-4	13.0627552643749	0	1.28553390044987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34269215-1	1.93947948361393	0	1.42646912667753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21768692-4	10.3042889397826	0	1.29362914195765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111774045-2	6.58692221795354	0	1.31788808922929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13600933-4	9.75380551182191	0	1.31305704586378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114874281-1	2.18219686931155	0	1.36559471666512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78373002-7	42.8959582565391	0	1.27623968552768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100729233-4	15.865230589155	0	1.27927906207046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151817082-4	15.7820806753326	0	1.29015465211884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25794974-4	12.1918858015975	0	1.28257704367972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86394466-4	15.6652431581225	0	1.27932033354658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98328488-4	21.7919042137271	0	1.27764517324474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110681331-4	12.5748301197796	0	1.28540910924238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125685623-4	9.56494373313322	0	1.29142674702656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61424451-4	10.2862901972537	0	1.28687017039604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86378848-4	24.2360989469618	0	1.28180284087621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122811904-4	11.8042749426487	0	1.28775815977492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151270767-3	9.5022527450822	0	1.2918291402333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83442655-4	12.1333019954335	0	1.28772539498353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68175876-4	15.5996725522984	0	1.28571216590385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31029923-8	76.504124721967	-0.0966988319517564	0.223366668233868	-0.432915227309167	0.665076357141999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55993213265429	6.41263871948489
Merged-chr13-28843026-4	12.7785441508295	0	1.27936800952604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135240575-7	42.2476433298917	-0.192176216319477	0.274100479653547	-0.701115943183977	0.483230661423881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56572497049255	5.46053669914228
Merged-chr4-40823792-4	14.2223280574349	0	1.29724540863094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102558037-4	14.0572798099254	0	1.30086785483184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8644163-4	24.3232698677012	0	1.28646680506811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25129012-4	10.6267513528785	0	1.28680118151668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5302577-4	17.7366381261958	0	1.27954664350472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43398004-4	14.1095217939227	0	1.29632031516944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37903354-4	9.06092570776893	0	1.28827820800223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121230098-4	13.0644181542781	0	1.29012433329198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60738729-4	12.5976860721913	0	1.28258397173198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25283921-8	54.5871611619874	0.156985055560542	0.224117039421833	0.700460152273671	0.483639982018192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40969153676686	5.53036115659367
Merged-chr9-110685772-4	12.8327577594372	0	1.28381187323694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144003008-4	15.4026193175973	0	1.27951993343508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55969643-4	20.8979924966947	0	1.28368719724184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114968928-8	126.159919605424	0.713238246521767	0.206323608010807	3.45689111099884	0.000546445604770095	0.0117654149882394	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9590199376718	7.69346403893849
Merged-chr1-39469189-4	9.60950545206816	0	1.29403610460854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121793734-4	13.0249458515243	0	1.31268140562252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160091242-4	11.4022162125297	0	1.29589758574284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46869556-4	13.6801571672762	0	1.28977343221475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159591764-8	23.2414970520621	0	1.27828249288873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63370086-4	13.0119311076229	0	1.28620868197575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108651275-6	31.0378187247542	0	1.28131986801497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54867581-3	10.6554763113231	0	1.30517105697973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44284235-8	70.2375704356262	0.599790764821625	0.263963882979101	2.27224557410043	0.0230716820470579	0.209487910446611	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07374471680755	5.79454174372278
Merged-chr17-27826336-7	68.0349291880104	-1.01604121594253	0.344314610782497	-2.95090938381455	0.00316839856189013	0.0462354114393194	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70363311981248	3.47010273003485
Merged-chr18-80464944-4	16.1390729123645	0	1.30029472395184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39140745-4	10.4718047830681	0	1.29436470061649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46640022-4	14.9795905374358	0	1.27868707967319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92287149-8	48.1056169461599	0.351999219278319	0.262003619712772	1.34348990927761	0.179113391279992	0.940939276998342	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43633962935991	5.75319650075086
Merged-chr19-9082675-4	9.41960853531079	0	1.28611002707825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119827954-4	14.1839224599254	0	1.28716530476371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64023904-4	12.1104440954416	0	1.28659605780676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28294626-4	15.8556037743983	0	1.28665421491285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40784217-4	15.8050245933676	0	1.285656762434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87394046-4	11.6326116185227	0	1.28208598130088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99216882-4	37.2562686248925	0	1.28797716699736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143537216-4	9.77053598843379	0	1.29536810882211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-31050501-5	22.3026894806588	-2.101802200321	0.570509611492416	-3.68407851153082	0.000229531490940276	0.00606508888272677	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6550757959037	2.35476919581267
Merged-chr19-10290502-7	31.2929950554696	0	1.27954645337559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20108060-7	42.9629117175475	-0.81755752993566	0.36019654029106	-2.26975397730091	0.0232225143738141	0.210675888417501	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80411927002567	3.74568385460741
Merged-chr7-90043628-8	53.9721121950882	2.13557237682999	0.296499845943297	7.20260872323824	5.9071305507695e-13	4.3371612693324e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23866297253241	6.37236922659363
Merged-chr19-55689715-8	47.1795049768664	-0.265933263292975	0.252553763631732	-1.05297683736264	0.292351608021084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11000199459413	5.84775452927386
Merged-chr14-73474994-4	12.4875752940279	0	1.29079181775484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151997774-4	14.2076759527897	0	1.2866386226388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115150024-4	16.1270478352033	0	1.28088886817858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125390188-4	22.9210331792958	0	1.28363622990491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149947807-4	9.79490755092466	0	1.28836196531775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153275135-4	10.9411675913598	0	1.29537832767094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76590017-4	16.1251119997015	0	1.29223502026658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118506817-2	3.35489659886704	0	1.36655442903723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25331468-2	10.104525241141	1.92266816227413	1.26211534707656	1.52336960859212	0.1276662610371	0.740829366284554	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr19-43520584-8	50.8461770795051	1.35543306140242	0.260013347276344	5.21293647268753	1.8587456362754e-07	2.07272341890874e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92278409427407	6.27218392484049
Merged-chr6-91705610-5	25.3181108410947	0	1.31967179001589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17600182-4	11.5230890406856	0	1.29062826065332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115192361-8	58.6908440097957	1.47684734812171	0.259664851973501	5.68751348862734	1.28902424609391e-08	2.20504131898567e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89689467749131	6.5643358149455
Merged-chr17-87302513-4	11.0417828485548	0	1.29378781109538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6469395-4	10.005950807458	0	1.29566570621358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127163002-8	59.9033275756306	0.541824978341947	0.246612879363725	2.19706683503265	0.0280156732887658	0.243057911142816	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88456296613147	5.4101029452758
Merged-chr2-169700455-5	23.5556390456668	-1.20931770047801	0.633705109713481	-1.90832878249125	0.0563487351715233	0.40494495199806	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26800133399831	1.76171389311731
Merged-chr8-70865751-13	122.48022391762	0.99230707265796	0.218323359426047	4.54512552054279	5.4902526441877e-06	0.000312513980215234	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28858644985458	7.28292005915062
Merged-chr1-87625478-4	15.5210303758995	0	1.28098617328231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59636894-4	9.79028158013664	0	1.2860998543993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38641395-4	13.235761202536	0	1.29557449206565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130030050-5	51.5639142443509	-0.99664626645318	0.346898550885213	-2.87301939979266	0.00406569149513643	0.0556148437678034	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70852627588972	3.81775761019942
Merged-chr13-28824210-3	9.84963300361815	0	1.29412328296776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19845291-3	9.26116797448084	0	1.2963618895994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84199103-4	11.6557782092033	0	1.2895190049974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105967751-8	59.4843559401532	-0.400313856120408	0.233754790381743	-1.71253755042478	0.0867976507171181	0.556994921315997	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68410648045712	6.25165197126314
Merged-chr12-3344901-4	14.0911331710253	0	1.29598105074629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143991367-7	17.5101493678201	0	1.2780227451196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99288054-8	37.5567093622596	0.438865247502764	0.257134441391891	1.70675404324348	0.0878677776062484	0.561930690493042	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84040716404739	5.2736673501114
Merged-chr12-51968068-4	15.3186415293804	0	1.28738087601911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20151757-4	14.598088790547	4.83129157042257	0.974542420753828	4.9574974547393	7.14069775018796e-07	6.11906773930922e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.52352953733079
Merged-chr4-8666859-4	8.31709390335399	0	1.2873770822924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12121930-4	15.5080187048817	0	1.30214910077497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95945636-4	11.8205813840938	0	1.28546813510445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50244024-4	13.6788445159617	0	1.28556503740356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43847702-4	21.9013579262318	0.109313863850915	0.685397578212217	0.159489714183187	0.873283061486937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95625988062023	1.81518459389541
Merged-chr10-75675825-4	12.4041225894189	0	1.29807946074179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59829948-4	17.5400038559736	0	1.28036878608179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170742602-2	4.78480329048273	0	1.36471810166483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23445901-4	10.5359351744931	0	1.28638036124276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92145613-2	2.25831900100708	0	1.62305672650579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121747148-4	10.2671033231185	0	1.29236093775789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58586197-5	32.8931031750328	-1.85569533475848	0.404609636691353	-4.58638442211413	4.50987876459743e-06	0.000266780195414627	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84939900439784	2.45391569783273
Merged-chr14-66844824-8	72.5289644260539	-1.13508678415519	0.234761510215953	-4.83506339310498	1.33103210814729e-06	0.000101847335057369	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.08149834150926	5.94822973454276
Merged-chr3-148325107-4	11.8801033797663	1.93438158920515	0.806829289022401	2.39751037242209	0.0165069136147265	0.161283010925227	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84549803888929	2.07721457594951
Merged-chr16-24773957-3	9.77249899215435	0	1.28962126357239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106007328-3	5.79102498983468	0	1.37617799765729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73745149-8	70.2104108415745	-1.11141903665352	0.266823662608949	-4.16536908978119	3.10849253909649e-05	0.00124771224483906	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32194440841224	5.18575805173859
Merged-chr3-101601033-4	12.5856304496756	0	1.28266211266665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115321534-4	13.6099800649938	0	1.29858754325308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-100211266-4	9.80079139626087	0	1.29866803500253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106305999-4	11.2007156671508	0	1.28245795145636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115693706-4	11.8379441382635	2.46096005929556	1.16441144375246	2.11347979487802	0.0345597225979557	0.284497308249687	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr5-139465097-4	10.6106716427344	0	1.29458765270751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86233984-4	11.1440891559405	0	1.28678173921623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145342974-10	69.3104727716296	0.440015091680368	0.19541567710846	2.25168777751721	0.0243420095920357	0.21831635448822	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7774019618415	6.22101188627599
Merged-chr18-53904430-4	10.3571906812802	0	1.29382420821946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146675019-13	208.14895141427	0.606820637477838	0.146744274616868	4.13522530308031	3.54606560677898e-05	0.00138755211461425	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.1856736181847	7.794203163026
Merged-chr7-16207552-13	114.881889477711	-0.620839857509325	0.200250199048359	-3.10032080097657	0.00193311147085718	0.0316594241039181	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12164912167005	5.4100012293617
Merged-chr5-59847851-2	4.52722538285304	0	1.38833538603369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50437931-2	6.76290116628933	0	1.32263044706226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92021843-4	9.56170511601288	0	1.28434522238249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118156739-4	16.4839129396108	0	1.27948950072927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98026214-4	13.5339416809939	0	1.28526153016542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5802461-8	48.8934310755444	-0.712104527244286	0.302143069996249	-2.3568454747386	0.0184309146139207	0.175874203615838	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07240628567982	5.14512194554955
Merged-chr1-39580966-4	9.94271944483146	0	1.29873926651728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150176426-3	17.9726091277684	2.11948765940364	0.606489232001664	3.49468308350415	0.000474624960251103	0.0105780500179292	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63096030824886	3.65707512103572
Merged-chr16-17727404-4	10.8472167354228	0	1.29644786712974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72182939-4	12.8550845118854	0	1.28781584580855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17902426-9	76.9047403814729	-1.55616696052136	0.309575429883965	-5.02677800077559	4.98789206051178e-07	4.64300277188323e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52787559998656	4.93185285441602
Merged-chr2-60046221-3	9.56317108489777	0	1.29220180248159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23935555-1	6.42337451373137	-1.18545832242663	0.724415444055986	-1.6364343584246	0.101748713263739	0.629449154305814	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14478028630917	2.0837505008635
Merged-chr18-34989481-8	28.5102508101663	0.00388934649337527	0.276444992575174	0.0140691515413058	0.988774811523704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1968688675631	5.2521266736587
Merged-chr5-134106057-4	11.0911864125328	0	1.28392002545298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100622428-4	15.509943897329	0	1.28675090661752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135535507-4	14.351820291877	0	1.28394063596718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79321102-4	9.37696726697403	0	1.29397719560076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21565536-4	11.2024909741344	0	1.28815572376171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141409043-4	9.93725945681263	0	1.28807632600605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78481126-4	12.0927445406724	3.76481979771574	1.01330501880525	3.71538651032707	0.000202893316066621	0.00552597713627922	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.88086620139027
Merged-chr11-106122897-4	15.926795753748	0	1.28393083468936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180343051-4	10.993643811033	0	1.28954933138811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23983607-8	38.6213282049805	0.242402856821488	0.319416663782762	0.758892331886442	0.44791696637403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49916030620989	5.57341761406087
Merged-chr7-141048431-4	12.3966528575161	0	1.29901238482178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106759238-4	11.3986585674494	0	1.28627180106069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57557437-4	12.5090483695484	0	1.28640479799491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71731211-4	20.2039237633886	0	1.27903490037713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30938873-4	11.3379079191229	0	1.28284410624068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101725180-2	8.29127906590402	0	1.32049831243658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6695608-4	16.8709310527822	0	1.29426693712518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111418212-4	8.93701940726982	0	1.31270152054721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130903100-4	13.0807088665936	0	1.28662678103455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21125720-7	25.5167489192245	0	1.27415800435008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155563074-7	55.762553222779	-2.94704688397613	0.384784400633485	-7.6589562339957	1.87450258929691e-14	2.26835641111474e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.74907891051941	3.77439072745571
Merged-chr12-12231892-8	33.6057327251792	0.687301856172854	0.261473668854624	2.62857005519353	0.00857446923503938	0.0984376786073232	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39718498494246	5.13051222816662
Merged-chr10-119055845-4	13.935687589145	0	1.29261917238129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12300343-4	9.34606936567532	0	1.28637922169618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55815557-4	16.0821660915147	0	1.29732383832365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21988208-5	19.6530823332172	0	1.27967829435809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45472169-8	61.187023583908	0.740500250730102	0.330680891251255	2.23931975001078	0.0251351187225774	0.223704849905604	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02602697529401	5.74788399748099
Merged-chr16-91613151-4	14.1217761970872	0	1.28098411354791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159912284-4	9.69062318109189	0	1.28655923886379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123891900-4	12.4005144580186	0	1.29878892535449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78115506-4	13.1180677259318	0	1.28151245129264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45880997-4	10.9058329427974	0	1.28634774172259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125441866-4	12.7417650137138	0	1.29343783325414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58604809-2	6.06624352639614	0	1.33175176317571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47174987-7	24.1521490416298	0	1.28187341538017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80816613-4	13.7212134090192	0	1.30297337386847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65583253-4	9.66817968490786	0	1.28934556559467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57926145-4	9.38030255996195	0	1.2842180130246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136654537-13	143.501000658916	0.225696115348533	0.16021755910514	1.40868526901239	0.158928252675756	0.863788205884549	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.32053184434092	7.55990053866947
Merged-chr10-81390013-4	7.8785865409602	0	1.2838035375594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70830338-2	7.51133692860322	0	1.30328592560449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79744311-4	12.4543620268583	0	1.28660871244206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80032979-4	16.5095750979829	0	1.2828966631116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116268870-4	10.5685924615734	0	1.3034370617624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99198103-4	14.2810168673174	0	1.28628391993952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32565133-8	37.2648196588803	0.529211482460968	0.265024832291663	1.99683734495704	0.0458428552873222	0.347805320051707	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97581091061558	5.47226754583912
Merged-chr10-118883548-8	74.7459272984139	-0.39109581239468	0.331210277984762	-1.18080820068233	0.237678925555284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49474302436747	5.12327869723762
Merged-chr11-96862128-8	47.3846745070405	0.47192250979305	0.26612172888704	1.77333324778363	0.076173502892451	0.506732537922234	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16710384472137	5.6447648987925
Merged-chr15-39670188-1	2.79289895026266	0	1.420538244912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44381677-3	11.5199138080493	0	1.28424475684989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35215000-1	2.46219371658224	2.32958933885897	1.30491828801336	1.7852377120146	0.0742227673513925	0.497355922640979	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-87632344-1	3.19592420271141	0	1.35327432886467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105626395-3	10.8516593447528	0	1.29166747901976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61322580-1	2.26845877779703	0	1.51703353549234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44390225-6	45.6792045791245	-1.92667032886926	0.458149042979691	-4.20533526893051	2.60695412318398e-05	0.00108574903845494	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25187913856114	3.0526081795128
Merged-chr9-56107753-2	2.66030205005367	0	1.40729650837467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44378509-4	9.00950459867487	0	1.30341357772839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38025180-1	15.6901794227918	0.230632857840336	0.477620609147815	0.482878781658602	0.629181808450066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39517431072522	4.27112514778619
Merged-chr19-6459705-4	14.1673207264462	0	1.28214336950912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117082927-1	2.13414223709069	0	1.45761964375159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73324520-3	5.18214934894438	0.167245941366592	1.14655541624185	0.145868170868519	0.884025458754413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0.73596151290311
Merged-chr15-27672346-4	8.48292629648596	0	1.29717040500553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85513818-3	19.145709343783	0	1.45518693395749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51839459-4	10.6035275720079	0	1.29307994864137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60978718-4	9.73184483201605	0	1.28666772430236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27405187-6	23.2021188896534	0	1.28003798702051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117684900-4	14.0544842035606	0	1.28589195427879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12472103-8	69.7404768676603	0.455453399699335	0.208876948965164	2.18048665473037	0.0292214070008657	0.251085083744717	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22261213892421	6.72631920431449
Merged-chr18-65440416-2	2.94646039262906	0	1.41108107348164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-34069158-3	7.89732307312246	0	1.30126336825605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34176463-1	2.91034657330627	0	1.36644158546393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-101229123-2	2.98116935079335	0	1.95949483725058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77468634-4	9.55082339466691	0	1.2883062544118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43670777-7	41.1886849163567	-1.60111277940201	0.338914328196345	-4.72424045310481	2.30976997167971e-06	0.000156246613425862	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22332817509194	3.65525490554892
Merged-chr3-9034657-7	78.0041153858757	1.95240593487907	0.275351738395904	7.09058873662122	1.33542654994511e-12	8.6400775576944e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47299965497523	6.35144962773896
Merged-chr12-80063953-4	13.7375114587804	0	1.28218267539626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62245699-7	26.7549582960847	0	1.27886082382281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40595317-5	40.7533618846238	-3.68487289572723	0.56094291565143	-6.56906931688038	5.06307125632466e-11	1.98114643302869e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18837977206481	2.58707500045288
Merged-chr1-84883133-4	14.3645454734865	0	1.30344487431218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14640736-4	7.90071261312019	0	1.30061406332504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86166377-4	14.1801011618296	0	1.29290457823844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116227886-4	15.5566292921812	0	1.284854217173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40900184-4	16.1728262653255	0	1.28243344366757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146158191-4	10.2318442831075	0	1.28542035523266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91483638-7	25.8403860938835	-1.13599288364293	0.373835056056271	-3.03875429882621	0.0023755851511952	0.0370312469680347	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89638962925113	3.82478561311438
Merged-chr4-83264947-1	6.2539114184086	0.339695889577166	1.02064210563428	0.332825667001128	0.73926588228735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15728980876493	1.20539659680455
Merged-chr10-9739301-1	11.0872992559188	-2.51094753985504	1.05838464335494	-2.37243383643178	0.0176713277738378	0.170241867125049	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53842679403808	0.306240821987646
Merged-chr8-35433965-6	25.3905195615476	-1.76944977721812	0.380636351728058	-4.64866208701548	3.34095026234352e-06	0.000210745682068586	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2310767219019	3.55237769814203
Merged-chr18-23894376-6	32.4469223537836	0	1.28599438895365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45038484-4	16.1629704220672	-2.70979046705997	0.58490047996123	-4.63290860564791	3.60563742759237e-06	0.000224394269850906	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88940211052876	1.36540726817539
Merged-chr3-105721978-8	64.0787241971699	0.061701629923759	0.245751423184972	0.251073337131062	0.801757409654714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47159137202695	5.51053679954144
Merged-chr5-44052744-4	27.7718970214692	0.200622040729755	0.493078680361446	0.406876323638028	0.684098826174831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11965340923693	3.11586815623841
Merged-chr10-117839104-4	11.5747839478072	0	1.29538719320607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87817046-4	16.4398812717018	0	1.29072579185067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122164248-16	134.650901393717	-0.51316489084661	0.147267933633234	-3.48456638309756	0.000492935169122098	0.0108638588740144	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.59278076865299	7.07896096431052
Merged-chr1-59186497-4	19.9936910569969	0.990317686609134	0.336447055180971	2.94345773386679	0.0032456813850754	0.047068862802738	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94178981078113	5.8835377722347
Merged-chr11-20159148-4	15.5484047855899	0	1.28821864585289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97757396-4	13.747877937794	0	1.28230877820469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83929325-4	13.1785508796247	0	1.29047106559818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19171999-4	11.3460102004975	0	1.28830537355841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108691963-4	19.3606047514576	2.84252702933883	1.11255656094719	2.55495057879917	0.0106202875783868	0.116227317383564	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.825079211029734
Merged-chr14-30746520-1	7.10461009504481	-0.230489150646939	0.925787007252824	-0.248965635552493	0.803387363431415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43311181118753	1.07982873328226
Merged-chr1-105805779-4	13.8457488374179	0	1.28619459472429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65010319-4	12.786651855418	0	1.28234763425408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54776308-8	57.0550936642734	-0.765740557436386	0.229321951424838	-3.33915071225688	0.000840349583188231	0.0165851657695615	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37033969401461	5.60898315772452
Merged-chr12-110458878-4	12.7903625206772	0	1.29135824796585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17631578-2	12.7014232367984	-1.11098944208799	0.590630694516387	-1.88102218933555	0.0599689004661387	0.423646245390303	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92928457107021	2.90726132930557
Merged-chr1-170702495-4	12.5635463354547	0	1.28927027676758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114723310-4	17.6278893011361	0	1.2984411895126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36708602-4	9.6453639526378	0	1.28737036708272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121196947-4	11.2565322581189	0	1.29217054909175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119844827-4	15.2899448946972	0	1.30971343093413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33073168-4	20.616607251531	0	1.3010089607705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61451058-4	18.3638224167604	0	1.29036825490195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69205812-8	102.812616330733	-0.150236165958734	0.208610596075169	-0.720175143474489	0.471417166079254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.82057535805483	6.64961114756717
Merged-chr11-32324758-4	13.4972339623122	0	1.27972246097532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31385455-4	11.1894308872409	0	1.2830268627209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133512801-4	12.2924163197109	0	1.29515698501939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17691894-3	4.70611825659735	0	1.34372862468626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91210189-4	9.42768067185691	0	1.29295340559146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-38741593-4	14.0534236441339	0	1.29897717950527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78626839-4	14.6507802933579	0	1.28096498087211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158154198-4	10.3722131742575	0	1.29399568832628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74908485-4	15.6898048886757	0	1.29586410859205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150913963-4	10.906974385136	0	1.28617885042827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120825185-2	11.8529020341338	-0.763528333582633	0.642453542223199	-1.18845688194116	0.234653457676763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08533240591676	4.04570681189271
Merged-chr2-163932392-2	8.02334044895019	0	1.32031403031879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72917614-2	6.98960928284836	0	1.33298621799999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66895486-4	10.0418701836405	0	1.29135189392572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84409063-4	10.1333449615669	0	1.28414349784343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29004180-4	11.401634591337	0	1.28783727656717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116139775-4	16.2069552358388	0	1.28888331575518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79058704-4	11.8029590930606	0	1.2929551383946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49791205-4	24.6244090646547	0	1.30200379690737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113776347-4	12.7624108643673	0	1.28538623552053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-82073588-3	13.3053479372138	0	1.28627654363908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87026699-4	12.6902919313543	0	1.28470205022393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134619293-4	24.4227385857542	0	1.28303352310768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44005061-4	18.9006944412518	3.77372678805101	1.0149816316701	3.7180247112862	0.000200786633275012	0.00548743586779174	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.21225560339436
Merged-chr7-121333176-4	13.1710207230072	0	1.28655825458593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66857188-4	15.8057209338023	0	1.28421813119356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59214881-4	13.9900899988492	0.824300180590671	0.529235582626865	1.55752978002584	0.119344755812068	0.707686244400672	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14825816897782	3.05750724623645
Merged-chr13-111896526-4	19.0878831960476	0	1.29903760936733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4346975-4	10.8825392544586	0	1.28505764908386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163413402-2	2.74397303327939	0	1.89252258585501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34433108-4	7.29976630695578	0	1.29652110510342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29114079-4	20.9331399742861	1.31903116001842	0.307736996716439	4.28622874107604	1.81731866537529e-05	0.000816182168437209	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69121371106833	5.97222934150899
Merged-chr11-75054924-4	25.5970941589416	0	1.28285538781233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105500785-1	8.83064417075095	0.696050488043727	0.714436830196151	0.974264565633638	0.329925193736864	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56251120876573	2.04449627883859
Merged-chr18-78312303-4	14.5431918213822	0	1.28480331855694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65528108-4	19.1570697609446	0	1.29353382776851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71289684-1	3.87689273790254	0	1.36764342294065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32403347-4	19.004768270194	0	1.32123149291156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119040422-4	11.0468425256038	2.57301130321415	0.76151477220929	3.37880681651045	0.000728011460142318	0.0147832930001429	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.775671219155393	2.32240838767146
Merged-chr11-116620767-2	3.2197825736094	0	1.51135268205356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64242496-4	10.8172055401557	0	1.28744747896778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64927154-2	3.72251004586277	0.058508452043894	1.2483788278428	0.0468675459235373	0.962618794258563	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.881031715718093	0.581381506691384
Merged-chr7-55870531-3	8.00972616127349	0	1.29396203160476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5614383-4	30.5125566180963	0	1.3040131540187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23217602-5	20.7589135189362	-0.377462264713311	0.47241564881489	-0.799004575018247	0.424287759187246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47132086428186	1.98095685408011
Merged-chr15-11972052-4	9.96625028801705	0	1.29074656132377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88069977-4	12.5761558266697	0	1.29318829168526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29290323-4	12.71176345387	0	1.28798802290439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-19980011-4	13.2744194379979	0	1.28391377022569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102906071-4	12.1339353755277	0	1.28359792376996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165642026-4	9.09139020841194	0	1.28772847416838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135820385-4	9.58842772541956	0	1.28439451118007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116073127-4	18.6416220989593	0	1.29567444777438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21036649-1	6.97832808865985	-1.41981559134796	0.695506763522631	-2.04141162360064	0.0412099300670522	0.32297665145094	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79697641377484	3.05264649967201
Merged-chr17-88511445-8	36.5559899446174	-0.337107326706275	0.255163049304783	-1.32114476459173	0.18645309947068	0.968980772865521	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54861916469695	5.28675418472595
Merged-chr7-123170585-7	30.5943307319495	0	1.28091886062072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8635621-4	15.3913111077495	0	1.29619677728748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142826905-4	14.0129046528095	-4.36555124008231	0.849923865162646	-5.13640270501982	2.80047229852317e-07	2.90475655268723e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96363062238178	0.683637474991079
Merged-chr2-166469162-2	11.7225841439329	0	1.31769374836422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50964249-2	5.50305822694092	0	1.33304056064385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67252573-1	4.52308939121786	-1.78174773646953	0.807622810829847	-2.20616321453173	0.0273725738835642	0.238778295687543	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76453463220608	0.961371261847668
Merged-chr1-173977817-3	10.0553565013208	0	1.29339989939318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31108409-4	13.0969304847506	0	1.2882461971578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22022458-3	6.47037541700592	0	1.31779427115855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145952870-5	40.0021330561008	2.87856794092117	0.427990126491538	6.72578118686596	1.74652859790322e-11	8.21069480277582e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40605596464074	4.92389665011585
Merged-chr15-25605576-4	23.8753502692348	0	1.28133194262723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77467279-4	10.6432126709103	0	1.28556069328673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77656082-4	17.3868127282445	1.21080151588405	0.475590840228392	2.54588905728837	0.0108999824257981	0.118553637083257	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17062484810334	3.59379492644403
Merged-chr6-125360198-8	82.8781631032222	-0.358792807663503	0.209236799502804	-1.71476914441475	0.0863875607553989	0.555225633402788	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.08824362265004	5.66179439021815
Merged-chr2-120632187-8	50.2582064953677	0.614640757688342	0.26472287914863	2.32182711092096	0.0202422468262182	0.188964265872294	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90875541741258	5.45018107782385
Merged-chr15-53283157-3	8.3226465476758	0	1.31184241493604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103471746-4	27.3897208919549	-3.36971514725493	0.671790671318178	-5.01601955954959	5.27529606159833e-07	4.84276617586199e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96949233871363	1.41959898789419
Merged-chr7-110796806-4	15.2255233221753	0	1.27834783402723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59438111-4	10.762119959099	0	1.28543630662335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127978242-4	11.4781182324145	0	1.29098371556485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86130013-2	7.39560857650849	2.47893573505093	1.19111817324029	2.08118370682507	0.0374170943058665	0.300930147016758	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr5-141056215-4	20.6307574552989	0	1.2763484392047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32903411-4	8.44343204349232	0	1.29058416389107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64957714-8	63.289564504188	-0.150432435748278	0.248608498444711	-0.605097720670773	0.545114068651203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89771026937155	5.80826626632778
Merged-chr6-83475675-4	11.9573538371123	2.44351331051248	1.17217006120514	2.08460648448932	0.037105035400207	0.299009204989756	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.869764003783424
Merged-chr6-129703526-1	7.23640280396963	0.323368543713182	0.927447917664862	0.34866490889037	0.727340891588656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30918646721259	0.735627456805112
Merged-chr19-46648758-8	62.4298232600286	0.990608764790044	0.238923419676069	4.146135050859	3.38134434934771e-05	0.00133508959427478	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31770675473546	6.29568960842565
Merged-chr5-123061481-2	9.92958374698699	0	1.29230979531762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54735719-4	12.7107277230369	2.42230833644485	1.17213794276464	2.06657275399814	0.0387744303568113	0.308895280655451	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-106162802-4	13.2924707029886	0	1.27994600257153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106135063-4	23.564364768234	0	1.27695396544836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77270874-4	11.6879553817216	0	1.29762933308512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125214003-4	11.2216874308245	0	1.28818831904996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32676758-4	12.708933215121	0	1.27889164197329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-121028830-5	17.4689712131325	-3.05779720177673	0.674715460750512	-4.5319803378678	5.84332899154608e-06	0.00032860428251426	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29800555387033	1.42539729206526
Merged-chr10-59266297-4	12.1658754698185	0	1.29031715961632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10702986-4	25.7121335453548	0	1.28185187560207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150896024-3	22.2383794145073	0	1.29023908431048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55741538-4	19.0896515969889	0	1.28559874604139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101783504-10	97.3054684645679	-0.0805048231518471	0.172816483006574	-0.465839957805324	0.641330061324712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61313877165137	6.54470222468651
Merged-chr2-181659725-4	9.45503795287936	0	1.28342962545031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9022817-4	14.9259433801478	0	1.2826686474472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48818033-4	13.2411418597924	0	1.28203119390301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65655645-4	17.376901190297	2.45913486131795	1.16485796982591	2.11110274816205	0.0347634812825512	0.285599000237565	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03338881410105
Merged-chr7-19267277-8	42.9181053536615	0.0963981577675646	0.22703847266502	0.424589527211071	0.671135928822328	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24996998038361	5.32939099873796
Merged-chr10-13301162-11	141.702511711514	-0.396844692193564	0.193175837567169	-2.05431847580616	0.039944877680756	0.316028107394393	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.27265111794291	6.85411521040723
Merged-chr10-118096244-9	128.405517976612	0.832634489296019	0.203257171289675	4.09645811762959	4.19519344762254e-05	0.00159013405468876	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67650744700492	7.51200671817105
Merged-chr15-6626268-4	15.0345515928867	0	1.29825931045707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99177154-8	55.8067726998925	0.757020800566405	0.240633323582443	3.14595164666395	0.00165547372519349	0.0280097818415377	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85342420180113	6.6325369537239
Merged-chr4-126153064-4	14.2674082136987	0	1.29065265887718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91002411-4	11.3875318131221	0	1.28819549857689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91209101-1	2.52145206264956	0	1.43765865091751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98799006-6	31.6057740013855	0	1.27955972542128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96305159-4	10.7046077996194	0	1.30531933038219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57837585-2	5.12386756878833	-3.2397378988372	1.09006562190105	-2.97205767592887	0.00295811108641431	0.0439719579283051	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72046141391115	0.306240821987646
Merged-chr19-41780324-1	4.74818585340459	0.306678848210985	0.859652747443523	0.356747360050906	0.72128094707798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57628164730877	2.27641180929709
Merged-chr10-17215660-3	10.2314161513748	-1.37229842946017	0.627270431913568	-2.18773013941339	0.0286892652918431	0.247488941222545	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46785891683051	2.35972355266179
Merged-chr13-9454534-4	14.3416542036779	0	1.28903169566096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38527119-1	2.12740195765601	0	1.537067133243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83075160-1	1.62531263064234	0	1.6200381985333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85477937-2	11.3783523370723	0	1.35898054143601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32518525-1	1.19149265913235	0	1.70235653735487	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125575889-1	5.77998927772442	0.924569704982248	0.821570146629476	1.12536915901257	0.260432634409472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13506381703702	2.49077112886706
Merged-chr17-81524874-1	2.43471940544486	0	1.38332851101392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119396417-4	12.738551501041	0	1.28350052151996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34188481-5	21.4402698670114	0.911592218527861	0.57201782230375	1.59364303520563	0.111016009762817	0.671312549345754	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70025126331795	2.45400388430303
Merged-chr2-167260575-4	17.8668617461539	0	1.29370340249058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109464787-8	61.7802320724442	-0.126610261491718	0.329587055319011	-0.384148161914825	0.700868636807452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72336860130574	5.77117545181261
Merged-chr13-45968362-4	15.9296166314694	0	1.28270867870122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76195494-4	25.6092689155713	0	1.27880760330417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108710125-4	12.1158480979407	0.768981080097689	0.788485255028785	0.975263741703853	0.329429451019465	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00113496145082	1.76628008406346
Merged-chr2-59462259-4	10.8374888928004	0	1.28944501913878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97839726-2	8.5538650423666	0	1.31563017737958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34173528-1	6.88773450498152	1.09732350906958	0.690400007186392	1.58940251687067	0.111969546747045	0.675102602115927	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43729705920155	2.4555271198677
Merged-chr5-64298448-7	32.9285885543914	0.361781048927253	0.361389307565614	1.00108398713918	0.316786205878389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28260357623047	4.24587967066357
Merged-chr1-36436834-4	16.4984559063551	0	1.30083513964241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90397081-4	14.3918777902784	0	1.28863199110402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50588144-4	9.69166751756314	0	1.29291136373413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66264975-5	41.9474450718549	0	1.27645333944309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59731316-4	17.9491555350446	0	1.28301298363881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41005902-1	8.1659232434981	-0.791006941753247	0.607269997840981	-1.30256219567162	0.192724271288696	0.991970267735788	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26435672529022	1.9852853107353
Merged-chr15-35152682-4	12.4251875902555	0	1.29700243819785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22124443-3	15.8243649326646	0	1.32398302484041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66915616-4	13.2217992810785	0	1.29884711645794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118798339-6	25.9925548107191	0.166224206290032	0.639995240497673	0.259727253847658	0.795074168363688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93846727568443	1.87496859647037
Merged-chr19-29063990-3	12.0675584297171	0	1.29130014077075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121423641-3	13.6434222947054	0	1.2942712580489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3501821-8	91.8953666171265	0.901318360273057	0.234218173473627	3.84819993643468	0.000118988925696234	0.00363678687490464	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41284890832493	6.29601764375311
Merged-chr10-21622274-2	5.96280631205299	0	1.29593180132665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10476746-4	14.0587559184864	0	1.28428823704589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70992909-4	8.88486418514314	0	1.31347518628773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80490781-4	9.69438281647692	0	1.28944092622121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99493470-4	25.8634937091615	0	1.28117872999166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87984647-4	14.0123993311218	0	1.28125588406839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36814755-4	9.28049494439574	0	1.29260270033243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61024919-4	12.4629693743456	0	1.28477459963312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173961681-7	105.467876880512	0.578739634456299	0.187557778131418	3.08566053736672	0.00203100551165436	0.0327779911495593	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.42954688100615	7.9916042248779
Merged-chr14-20765894-5	27.8228311238538	0	1.28154094679538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144123633-3	11.2144672283271	0	1.29606055828394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78995330-4	12.1237678397106	0	1.28922397563229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98892339-4	8.0348310449726	0	1.29652427746898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145200259-4	23.2002347736242	0	1.28166403645151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38400057-1	3.68973143768794	0	1.35680135205235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110466405-1	3.40425276768757	0	1.37700685015054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80830668-8	117.108430496931	-0.0985788361996164	0.246738916111631	-0.399526907847065	0.689505001165434	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65397503548182	5.54957744456434
Merged-chr10-67748781-3	9.04122987420219	0	1.29533452532203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4987415-1	4.40509456078158	0	1.35148950756366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65102193-4	11.6955595360307	0	1.28393860379467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5602186-4	23.0018674699938	0	1.29603219634884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112396738-4	11.4284443030281	0	1.29305235884113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62015876-2	6.02178764001357	0	1.31380272926379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50157196-2	6.50560367672269	0	1.32678179166962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57396455-4	12.1143680302092	0	1.30140803176539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-113868048-6	42.2208296022505	0.238669508301093	0.244171037961859	0.977468541286926	0.328337244664189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06164363075938	6.30352882716368
Merged-chr14-65890806-3	14.3210046516858	0	1.29285284009861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113857714-2	10.1664640144283	0	1.32194856334566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67311699-4	12.5571064099986	0	1.28413479652578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73746722-4	11.0983404737595	0	1.29978073486237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61087148-4	17.7344836604163	0	1.2828803840077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80938844-4	13.3893950626778	0	1.28193099849242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37926171-7	26.9408826521343	0	1.27633693442835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55419134-8	38.1454015579518	0.928803569817358	0.27543958080013	3.37207734313005	0.000746034948426447	0.0150930030154411	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63538222327133	5.52151164555899
Merged-chr9-71805842-4	16.2050488778552	0	1.2926504083238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51689696-8	54.8616958139686	0.427040272372781	0.291725924009719	1.46384067107644	0.143237486952945	0.801918850447835	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86257628630015	6.29659796818466
Merged-chr2-73548768-3	10.0652954257638	0	1.29919273558618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107594150-3	13.0467331784803	0	1.29712079933082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65201493-4	22.1043783247012	-0.366285388975302	0.57088584877335	-0.641608808069654	0.521127212526535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75326577161001	2.00129118555875
Merged-chr16-91789913-4	8.73610879136345	0	1.3030840357185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68438100-4	11.0136432455884	0	1.28807592192271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138531727-4	10.5380873196353	0	1.29032786482143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48645230-4	12.966469960184	0	1.30683561898637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3481848-4	11.7769507932081	0	1.28746818753664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151265001-3	5.58790651246568	0	1.31303745367588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116607287-4	10.6199833119668	0	1.28703705282984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73472721-2	2.69771509066214	0	1.38287809376885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19541111-2	2.54847297217147	0	1.46456290903246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29517341-4	12.2870865562182	0	1.28139575133222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129063307-2	6.44049936919093	0	1.30826419783255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134268252-6	74.6985290701365	0.21147445529716	0.254703554284298	0.8302768129459	0.406382294651135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.12398339202779	7.34763569442379
Merged-chr4-129031629-4	9.48492811283924	0	1.29066457564231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93756043-5	27.1352445970566	2.12074068659781	0.344029720681128	6.16441126772146	7.07458537609027e-10	1.89465514748359e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63352178636066	5.04848903595792
Merged-chr2-118490805-7	30.2996495299625	-1.60771256424884	0.377543430764965	-4.25835131336109	2.05940125930169e-05	0.000898982697448646	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07551460536685	3.46941575194059
Merged-chr10-93950114-8	83.6487646286504	0.109009333690645	0.229018759661038	0.475984298631191	0.634085564006884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89534363670213	6.18613066123723
Merged-chrX-144338592-4	12.3199924739264	0	1.298030423871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94507272-4	13.7639774078991	0	1.2878501410551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59205282-4	13.5402820300033	0	1.28459766760472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117405665-4	11.2654335005333	0	1.28626580173815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80988252-4	11.0072835544768	0	1.29091184333897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80702657-8	58.0888130211237	0.336258111743571	0.242224464526447	1.38820871129166	0.165073500405779	0.886569652134134	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75662979587461	6.10501072190845
Merged-chr6-93758279-8	80.0410773345107	0.216151705938999	0.181806760546217	1.18890906636033	0.23447545205228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71611873075281	6.91201191565227
Merged-chr8-35666000-6	66.3249787819009	-0.446656839711204	0.198583706282205	-2.24921192213255	0.0244990163183893	0.219303112375544	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.42308712465446	6.97848041695613
Merged-chr12-98265221-3	7.41406684773763	0	1.31848629667383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107277171-1	3.06436164000631	0	1.42311871256907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120296295-4	17.8249187112584	0	1.28745515823373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73459385-1	4.22766207126201	0	1.3634512403473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3659082-4	9.11753015237378	0	1.29595653601439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22484984-6	29.4043735812302	0	1.27810139528169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68985471-4	10.5358082345622	0	1.28848209651417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82354451-11	57.2754578432149	0.774784272517494	0.210016440751098	3.68916009502196	0.000224995609385555	0.00597665166297093	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15213522688077	5.96113377890121
Merged-chr1-61141109-4	15.4272343404216	0.885884331133378	0.645482532504935	1.37243734186812	0.169927332110353	0.905789333883933	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1483701013677	2.30712077184164
Merged-chrX-102032017-4	12.0204176474002	0	1.29410839529184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87805904-6	33.2263639359832	-1.44403364893551	0.41813870582167	-3.45347997884552	0.000553403380891819	0.0118917123734814	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91340210124786	3.49959394815356
Merged-chr17-46857698-4	15.3023683973557	0	1.2886484769233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12591545-4	13.0879190589698	0	1.28542505838182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22856646-4	26.6581677154843	-0.0912461887641153	0.581044186654844	-0.157038295640531	0.87521466696225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10065350327419	2.1439715376394
Merged-chr1-138127007-4	16.6661882981958	0	1.28384212625952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99327588-4	8.07405544502378	0	1.31341137013328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65662869-4	15.1437415689755	0	1.28675595086921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112991380-4	12.4083692611637	0	1.30041823111322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78440158-4	15.0729605741848	0	1.2841029873177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101592519-4	9.97275251202875	0	1.28940320255207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66088641-12	74.9214713056088	-0.751893125729504	0.308899822229982	-2.4341002215589	0.014928860896041	0.14907416627639	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03891843190968	4.95131288910843
Merged-chr8-36164387-4	10.7918223689529	-4.38511251506775	0.963333402805905	-4.55201958355769	5.31333883242851e-06	0.000304566174863047	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35561511153274	0.469435083901436
Merged-chr4-97751971-5	36.0730267264967	0	1.27992105810694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173491610-1	5.83144860777529	-1.32618183102299	0.965337104839084	-1.37380177802661	0.169503229002461	0.90414508944564	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33175447047053	0.963545719069792
Merged-chr13-60673034-8	136.091951937038	0.648037147247792	0.28092833960469	2.3067702893901	0.0210676293816019	0.195025543217192	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15682250939738	5.80584506778418
Merged-chr5-3493262-4	16.738703214545	0	1.29255308420056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120172225-4	13.7835203540415	0	1.28488041423365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21646242-4	13.9506101200528	0	1.28287675743287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20028798-4	15.5983786889126	0	1.2827010354151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135402502-4	11.4086093639893	0	1.28243026860107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83602167-4	9.04599425276848	0	1.28886692125419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56285055-4	14.6937780015187	0	1.29296998359033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88284675-4	10.318238732975	0	1.28693223844527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144698210-4	14.3944093046886	0	1.29533604057068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79562004-4	14.5788876994992	0	1.28047857657698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23867552-4	15.6946809051394	0	1.29297384935896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120310981-4	10.5610247279095	0	1.28868738624178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-51930148-4	13.1629458996318	0	1.30567929086724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27827181-8	46.8928529795646	-0.365884360256019	0.328824327636499	-1.11270465566188	0.265835295363216	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43786693954136	5.10071971505225
Merged-chr18-73749580-3	7.58038242072174	0	1.31228653632391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34682897-5	32.1947648533965	-3.20230882257912	0.453861431327947	-7.05569718318987	1.71737457628336e-12	1.0488183089889e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11060309082735	3.04983561184268
Merged-chr11-4260667-4	18.7105754571338	0	1.30488474153617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88551717-8	49.2816852516464	0.409134537317212	0.243513057972288	1.6801338734113	0.0929312716378716	0.58644972249622	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39371108846377	5.78831448678779
Merged-chr11-105460088-4	11.2798953565751	0	1.29180599868742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48325952-4	13.7640620199735	0	1.28816349306958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126882489-4	11.9809042442884	0	1.30309131670401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63616992-4	19.8219923266535	0	1.29812515835286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135633621-4	17.7383574636997	0	1.2848815568658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132117982-1	2.3500284263591	0	1.46807705350675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20733396-1	2.18408871979539	-2.94655882663702	1.23745655370201	-2.38114123507772	0.0172590933400322	0.167009138663963	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33045274100818	0.382164212378408
Merged-chr19-43631051-4	11.050023871152	0	1.28545900058057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95772492-4	13.6452990578533	0	1.28493250538149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96715225-4	10.4915979244267	0	1.30629192977418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86724148-4	15.9494504134888	0	1.28328730509449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72863307-3	5.98580208110471	-0.0229685073616955	1.24027294547601	-0.0185189134742275	0.985224889381979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	0.61242769162773
Merged-chr17-32193168-3	6.28165612051355	0	1.30600232651419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22729147-1	2.03701472168084	0	1.38496211347282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74218253-1	2.50627231991457	0	1.44942469438489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33212024-4	11.3921999987921	0	1.28492236985228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108558144-2	5.07355108975703	0	1.31294001351539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22115942-1	2.21689701903532	0	1.50759517128871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121372078-1	2.30224788570482	0	1.40851993763953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15727778-4	13.0486383886455	0	1.28603876485092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25403974-4	17.7260405693929	0	1.27939545031321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65737290-4	9.76744464281512	0	1.28292621705021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25519929-2	4.94835873946371	0	1.30539363130893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64141830-1	13.1015073219532	0	1.28413966959442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99170545-2	3.41262734432255	0	1.37690489399343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135628190-4	7.70528710449596	0	1.28962297360097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38485201-3	9.58466983176714	0	1.30581494585991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95181110-1	2.251520633294	0	1.44278460911021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120872571-1	6.76543309215942	1.82790122934985	0.651673786307849	2.80493287862028	0.00503270588128249	0.0655219515984901	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65385559320378	3.24997699552959
Merged-chr1-36072099-4	18.5943733985442	0	1.29364241300059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51183694-8	60.2881670590827	0.117128274398431	0.261015943945853	0.448739922273594	0.653619281973778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87055066936171	6.00380170641241
Merged-chr5-115260508-4	10.0770459312952	3.10249260983758	1.1187876236204	2.77308449283511	0.00555277012709989	0.0706348679629101	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.19380919831911
Merged-chr11-76628803-4	15.5097824175345	0	1.28830697240547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78528072-4	10.5406974765543	0	1.28613835101471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55529078-4	22.6174556335521	0	1.2946769293941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33835409-4	12.4041997028807	0	1.29670703544639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51708784-4	9.99065053354987	0	1.28699949932001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25081767-4	20.3630760031151	0	1.28658636959726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106148374-4	17.5911017673528	0	1.28496762496282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34531841-4	15.4305440391645	0	1.28594580239942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114699165-8	90.7822054073468	1.09761976952254	0.21891739782823	5.01385353750536	5.33506027550911e-07	4.87802918152801e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4557969393138	6.63745593019718
Merged-chr4-6227219-7	37.7268379362148	-0.26846184560012	0.340058772920571	-0.789457196750004	0.429844837489865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99091131110183	4.00929850205299
Merged-chr13-115209595-4	9.65537956362007	0	1.28649989845706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85992644-4	18.3639189603042	0	1.28931935717115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46120116-4	18.7292226566419	0	1.2908976299547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31077678-4	16.0057361194206	0	1.28299010096531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43185689-8	54.2342757234579	0.204966835820464	0.276542384419549	0.741176931162581	0.458586168780348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91953128304846	5.14914098305959
Merged-chr10-93945572-7	40.0390435387251	-0.13870761673935	0.319760765085132	-0.433785604379639	0.664444136239498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03231010886173	4.88593050669671
Merged-chr1-55807128-4	8.95933062763305	0	1.29445372890237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119360462-2	6.35153690800255	0	1.29576122294713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51288064-4	8.44072714939953	0	1.29723803291667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-138392872-4	10.0852621034821	0	1.30245747793001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68468201-6	40.6451558902165	0	1.2978276479338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37073435-1	4.40256721345752	0	1.34875059110639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27925838-6	26.145155852916	-3.09975595017691	0.649768293208244	-4.77055587749874	1.83718211207649e-06	0.000130491850321468	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41122834517155	1.41695929335733
Merged-chr10-44729620-4	17.4979432924143	0	1.30237757223649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42887609-4	15.3304197685886	1.59653420026643	0.815984417930614	1.95657437223536	0.0503975305340583	0.372880098536976	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648566509472229	2.1199222003366
Merged-chr9-110645389-4	10.862801078225	0	1.28929024389926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36467800-4	20.9204229411	0	1.28394762865509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97142427-4	19.9185512852304	0	1.28835758186266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32698963-4	19.6441996869743	0	1.28586779005389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-10280387-4	11.2761188792969	0	1.27996718874221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6567987-4	13.2825531978935	0	1.2853480638709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3537873-4	14.1362090554855	0.297950172520222	0.834013508445354	0.357248617082494	0.720905692802952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04582716505043	1.20275690226768
Merged-chr6-145348359-8	40.6724389611572	-0.27833620771254	0.292214422557577	-0.952506742399742	0.340840048150797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7510619349204	5.48137978061836
Merged-chr19-21913937-4	14.2926365313348	1.92814350053343	1.25435249206908	1.53716241066569	0.124253542769405	0.727160308598381	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr15-68401666-4	27.7907805834123	-4.21082759860184	0.679140234299982	-6.20023286198338	5.63796802026834e-10	1.58801145798472e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53463712341681	1.46261730325446
Merged-chr10-24641949-4	14.8508978404387	0	1.34753702739503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29673032-4	13.2831461705469	0	1.28947480217602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180695366-6	35.233449971091	-0.911723307190495	0.297199848135158	-3.06771121489897	0.00215704962462337	0.0343372873984504	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00994471688124	4.09829006238487
Merged-chr19-44388588-8	76.5182429871443	0.792778322975736	0.233001717496814	3.40245699256091	0.00066782865196605	0.0137838857361578	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52157379253047	6.44019787889105
Merged-chr2-152805040-4	12.7735909916919	0	1.29647187725818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67821445-4	11.5976175547184	0	1.28594365980766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22354251-6	53.0318781573185	0	1.28477849685756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36296644-4	9.5571318177093	0	1.29270135086485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56334505-4	14.2750347841849	0	1.28847436687877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64609134-4	11.013296274765	0	1.29028172062874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4510042-4	9.40735846584679	0	1.30399056335392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79370842-4	15.8834794401037	0	1.28012850756756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108268028-4	8.00185150472356	0	1.29116831071424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102316403-3	8.386412332716	0	1.31379070811779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123267087-4	9.5204587482703	0	1.28294728168062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94381090-2	7.80354211873969	0	1.33500406733942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3170130-2	5.45882488576492	0	1.3150284993138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45552380-4	9.61447453758636	0	1.29830361838676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66179154-4	11.1530772005763	0	1.29543196077627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109776289-4	12.8187724143089	0	1.28038180308299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133814598-5	30.6308908654791	0.839373851480356	0.316373247182021	2.65311260973161	0.00797532587073147	0.0928148965892821	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66055098931885	5.45321598165703
Merged-chr10-44665880-5	20.0920450502864	0	1.2914466942684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96912980-8	44.2020006294931	0.332230915094322	0.217109184527607	1.53024809068857	0.125955331790506	0.734291828992987	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85927478353414	6.10157330930184
Merged-chr9-21901643-4	7.60685383332298	0	1.29399656883881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34034962-4	12.8748375394362	0	1.30818561567407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33050543-4	12.2742694828213	3.63051151382788	1.07629941762218	3.37314269095175	0.000743154296613693	0.0150440398595162	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26514550294121
Merged-chr8-20550189-4	22.9930135995572	0	1.31619529540859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122922297-4	12.4419157073346	0	1.29307193925019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43343358-4	11.4129325086305	0	1.29336579642928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45282677-4	13.1974454669878	0	1.29118250220723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77931084-8	43.2196044993452	0.837009523129933	0.258147613710909	3.24236784953307	0.00118540909670299	0.0216598949792256	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85349064928771	5.62257448510507
Merged-chr13-113359074-4	10.7809028954202	0	1.28777968625411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73039518-4	13.8913034665303	0	1.29576860670468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80030689-10	96.1372189524081	-0.0262224109673819	0.15538308188387	-0.168759755885007	0.865985614369432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88425540720174	6.7779618447595
Merged-chr17-24654183-8	39.3213616519984	0.738159419568298	0.243455978108479	3.03200367188926	0.00242936248694169	0.037698675153572	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9222940770306	5.54825807215687
Merged-chr10-21777328-4	23.2136165713808	0	1.28053561632291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47752001-1	5.06046473124124	-3.39508037484099	1.01754717109167	-3.33653364806526	0.00084830159347139	0.0167269510944422	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01005420716666	0.992113827166316
Merged-chr10-44604954-4	16.2455644750997	0	1.28011680996582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62761369-4	10.7416928467465	0	1.29273297791134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60736645-2	7.25274547924689	0	1.30060609718568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54749505-4	12.6610221234907	-0.091710847955939	0.682183667530201	-0.134437179195409	0.893056883718085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66183756919659	1.428339764855
Merged-chr8-10139747-4	9.08226129518282	0	1.29629826607691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98087746-4	11.233292966077	0	1.28739028614627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141998820-2	6.26259360587381	0	1.30105994367379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101905856-2	2.58150354968144	0	1.43752576665743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191248646-8	57.5793830947231	0.277160966462811	0.20476251269481	1.35357279423459	0.175872711426638	0.92902609174027	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8398766111279	6.08985200456933
Merged-chr15-58746334-4	13.6705257874883	0	1.29353627999981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44973613-4	9.16227776824915	0	1.28696445513336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108504955-2	10.8248869251066	0	1.3295398766698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21808397-2	2.62533452793716	0	1.42327133005363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97782032-4	9.31540131852893	0	1.28959784417941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17264929-10	106.284887104214	-1.10030386110013	0.180383679130882	-6.0997972011746	1.06203121135926e-09	2.68990277277062e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.54156460972607	6.43332797435733
Merged-chr3-152114992-3	9.9083091431701	0	1.33200086334579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90528355-8	54.9675141082275	0.0177088900986127	0.31134448455424	0.0568787660522299	0.954641769159935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49306378259435	5.41405211273116
Merged-chr4-9243673-4	13.9119273037116	0	1.30759061045204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105164242-4	19.5931726599471	0	1.28561325082685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38974035-4	21.6151391115653	0	1.29051009471756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5769874-4	13.8106539755729	0	1.2916485073823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95950855-4	12.7867093023114	-2.11671703917284	1.05591783690708	-2.00462286476093	0.0450033803622336	0.343710950578602	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87877064866006	0.609949614787909
Merged-chr12-102380329-4	11.6051163011097	0	1.28001561825251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94363517-4	13.5906029815685	0	1.28777310180282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113662057-4	9.51353845202918	0	1.2973658502953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101329317-4	20.3553507569226	0	1.28533398622272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26612697-2	6.54313749184862	0	1.30148411183015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34600104-2	8.08952858831835	-5.68078369159753	1.05776734642161	-5.37054174608001	7.85004578667912e-08	1.0058217489732e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28657687940729	0
Merged-chr11-95827646-4	6.46135230031598	0	1.29044027503677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54904339-2	7.32661215228824	0	1.33369882188407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6452403-4	8.3071273830826	0	1.29029353171065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120172449-3	14.4208536456451	0	1.29364786645095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34938616-6	24.374481167194	0	1.28914852305201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53512684-4	18.9314331131285	0	1.28107002287955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21030414-4	16.2272426353909	0	1.27900297338697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25606725-4	15.4251586605099	0	1.28849171417462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52619708-4	10.208818030848	0	1.28504427797511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106563760-4	13.039828547253	0	1.29201172141107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11180081-1	4.52937648394419	0	1.31954587887061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3649171-8	47.6102358389934	0.763172327447343	0.274249237016066	2.7827691910867	0.0053897133368648	0.0690174814248025	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89579597067319	5.62359148741995
Merged-chr12-85490556-4	11.2963345005577	0	1.29385353773843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-14628780-4	8.28787945358312	0	1.28691803009663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35123470-8	60.0362157593241	-1.27271349764988	0.281874149615499	-4.51518345824181	6.32619757243752e-06	0.000350926745813669	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11505893042677	4.768214528362
Merged-chr15-38278281-4	19.1383653200428	0	1.28586308960222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69419963-4	13.0180133912521	0	1.2881406444492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51571401-4	7.06416624434694	0	1.29227886785382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79642062-4	11.3551052586016	0	1.28545805603072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21940447-8	49.7543541660635	-0.660333784647698	0.266199821822612	-2.48059439005833	0.0131163531412621	0.135832204812823	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72590248617574	5.07319404336523
Merged-chr5-27195202-3	11.5847563753848	3.13509858965934	1.08778949821161	2.88208205246845	0.00395056843818624	0.0545664437035971	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.4217268527323
Merged-chr11-21015164-4	20.2748258904191	0	1.29740878837074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33691502-4	10.5029869652564	0	1.28657349862252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140614065-4	24.2504179677096	0	1.38542161193007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5116467-4	12.4007193737982	0	1.28394249369466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71104136-4	39.386394037118	-3.00893335670815	0.424515731341211	-7.0879195623723	1.36143057515876e-12	8.72196493767885e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19524274960166	3.24095438322535
Merged-chr7-74645734-4	14.4281955044856	0	1.29281726874895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52100160-4	24.5773231531435	0	1.27969957371932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130089839-6	42.8302149745843	-3.07441595973065	0.470710300335748	-6.53143973594317	6.51404328933843e-11	2.43238098734348e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81236854306409	2.43049365066179
Merged-chr14-79290801-8	39.3538736001418	-2.12091297250836	0.326958759726417	-6.48679048783717	8.76841352078713e-11	3.11700416807384e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01424056721679	3.80667869667468
Merged-chr9-99180538-7	36.8514689600374	-0.827228697666805	0.289902832528128	-2.85346883455008	0.00432447694020532	0.05816481180325	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36964597617282	4.49739329772685
Merged-chr6-72522510-4	13.6130319579171	0	1.29615908691403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126661193-8	82.8841610893795	-0.993854541990438	0.226741463964088	-4.38320598542069	1.16945442341252e-05	0.000574580216182816	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.22169738283441	6.21431897546897
Merged-chr8-117054304-3	7.61040902762953	0	1.29579335181237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67563372-4	23.9020883847908	0	1.30024982356912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135947625-4	26.9648739038277	-0.504024407817066	0.554976797883283	-0.908190053601244	0.363777818211659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81456000587533	1.69735600200997
Merged-chr6-129402622-4	11.3328267429352	0	1.2936965875303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71382133-4	8.75766308798387	0	1.29566112282203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67461008-4	10.5657447170089	0	1.29056772265761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116162383-4	19.8619635764022	0	1.28609706065857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89580146-4	9.4645496972069	0	1.28765889559281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66210089-4	8.02306252096373	0	1.29113755920772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180793677-4	20.9191101576398	0	1.28864923280661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38348773-4	11.1721095685412	0	1.29145606353365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34501029-4	14.6645220246869	0	1.31067791264157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34234035-11	152.753729698966	0.662923992776343	0.171214615996816	3.8718890260436	0.00010799512218802	0.00337173877424669	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.07815488295898	7.7380488297532
Merged-chr11-3382790-4	15.6299772165305	0	1.31704619901177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22656804-2	7.27729380779419	0	1.30281318519552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59680836-5	21.1234482856293	0	1.27803901632267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27385010-1	2.10843635196963	0	1.420474078954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137825532-4	21.8443747959845	0	1.28185236458425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53721567-2	2.74413196340696	0	1.64715037022452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104367938-4	22.4461118975534	0	1.2810276313852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50650390-2	4.12752848817579	0	1.34310590958159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21796548-2	5.81438728338595	0	1.33781320003091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15989047-1	2.94669163461672	0	1.37039496433982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152806734-3	7.79660567972849	0	1.30035707025261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46483133-4	16.3597556843758	0	1.28140603543144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118705019-1	8.43712634815273	1.90598116550735	0.539745702644117	3.53125769444813	0.000413588600207949	0.00953310781981962	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60576163229634	4.28525990207753
Merged-chr9-110997423-4	12.258456167954	0	1.29167397414829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80047000-2	2.62149189092811	0	2.30526716463431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72735372-4	13.5288446197856	0	1.29494553889483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80315020-4	15.1026530817858	0	1.29142237988325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103604395-4	12.623250316538	0	1.29107615917029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63771365-2	11.8677197552163	-1.71684443117396	0.537425314703646	-3.19457305825031	0.00140037835849044	0.0246124594443025	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07566026917859	2.11480110409737
Merged-chr1-52799759-12	75.0163993385032	-2.13239212834273	0.225270439901771	-9.46592073630502	2.90986028600954e-21	2.71639614642257e-17	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.0373994349479	4.94765251085556
Merged-chr5-146819775-7	44.5314270687147	-0.230238465787743	0.221438996944612	-1.03973766574337	0.29846179621216	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84650635014134	5.63331805403119
Merged-chr4-62662247-4	12.7219229786719	0	1.28532391389696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75778325-4	11.7988717029324	0	1.28405269361841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48924975-4	10.3381842197082	0	1.30049874156851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5208047-4	13.1643087231974	0	1.28807655050373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124071693-4	11.364727841684	0	1.29922403208305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129315993-4	17.332893116408	0	1.28757416656049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58876173-8	36.071143036589	0	1.27976782313034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69036015-4	9.93914069645896	0	1.29781056418762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119063226-3	17.0232490307143	0	1.28407477312405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31559071-4	9.14916960760783	0	1.29027002466701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20018257-4	10.7368986391428	0	1.28615294659756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35520604-2	4.68680371776188	-2.21092838796056	1.23798356749179	-1.78591093292135	0.0741136804990119	0.497027151671637	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26054434455505	0
Merged-chr7-88128655-4	11.6410980513621	0	1.31156903846281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165617357-4	14.6148348873713	0	1.30011411714722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46553958-3	12.2521862138127	0.754909899523341	0.6812775330194	1.10807983961779	0.267827336836947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91080065852963	1.62319166842064
Merged-chr12-73304833-4	15.1853911877282	0	1.29404111442634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62001746-4	23.1918030462309	0	1.28526460388597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128020578-4	11.1955783175582	0	1.29072825193358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45033739-4	25.8219285680192	0	1.295629821191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98867994-6	22.7386395312536	-0.241770419358516	0.383812583108599	-0.629917907850634	0.528748295718633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99484332363074	3.53873698183212
Merged-chr13-95844760-3	20.482989098396	-0.768442346121207	0.473630575881787	-1.62245088313936	0.104706841750138	0.643121842372826	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2684499758914	3.59485125810271
Merged-chr2-3519982-3	11.693750666003	0	1.28383247468635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107584131-6	38.9592667864072	0	1.27732674221792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154933125-10	80.7731494337371	-0.632825378670248	0.256367004428617	-2.46843535922522	0.0135705159417291	0.139343012999408	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.48266640780371	5.77982697109957
Merged-chr4-86580200-8	54.2005246576608	0.218404843524716	0.247467354980627	0.882560221091843	0.377473928973975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3480620258251	5.56715476642764
Merged-chr9-106908916-6	37.8697849229855	-0.834432672393395	0.416979260849217	-2.00113710857944	0.0453776162568803	0.345438689646098	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86141700139088	3.90265069314093
Merged-chr11-18970051-4	14.5122279124727	0	1.29613463973054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77238783-4	13.5643793841154	0	1.29871701744469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27215917-2	5.57605445769453	0	1.30637170473445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122146014-4	13.2348115258415	0	1.28671733577647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84685839-2	7.87724801953341	0	1.29819897558229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116003684-4	18.9696177292327	0	1.28040513047638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-177206497-4	17.241209290505	0	1.30502989366915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161528353-4	10.3673506180877	0	1.29807550079764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59743077-4	19.4897437957471	0	1.28865237654602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103662319-4	13.8028897091755	-2.54878840356273	0.579060420195896	-4.4015931924694	1.07458894505623e-05	0.000536031215294993	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72757806813675	1.3492022585148
Merged-chr5-122637119-2	6.53588676475613	3.38000522505867	1.07121934130093	3.15528771255555	0.00160339903101179	0.0272995604691235	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.80756150444367
Merged-chr13-53219643-8	32.795765051027	-0.703753892750692	0.376087054290811	-1.87125263877472	0.0613100717616746	0.430792252617031	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4466568036042	4.65125081181642
Merged-chr1-161560562-3	8.62672782507344	0	1.29081995112677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31123578-3	11.6674478041094	0	1.29231029962751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91083034-8	56.102014325023	0.20970095442642	0.256890470276936	0.816304918591786	0.414325761950272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93617747333368	5.09911593283376
Merged-chr3-27863505-4	16.9597022550385	0	1.29884333214552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36792083-4	10.8411416643825	0	1.28495861406605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29484892-4	10.2076689285055	0	1.29432304672877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33352544-4	10.8966016653957	0	1.28237523798187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31380449-4	8.71981867658011	0	1.29751602958179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-5357039-3	11.8381764915532	0	1.32203658324216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128694664-4	12.3055036936509	0	1.28584128017127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122924042-4	12.1358323687968	0	1.28326882776047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70713666-4	11.0817129652457	0	1.28546361013292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35644698-1	3.50525596213407	0	1.40487992580672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75701948-4	8.76722755294501	0	1.29073121957507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104118065-4	10.6702545687451	0	1.30227674020212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121506832-8	46.5391694969337	-0.767557362011846	0.276452586654821	-2.77645209002952	0.00549557337886264	0.0700709732712504	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0564684014148	5.23826420153957
Merged-chr6-34874675-2	6.1592398647808	0	1.33525189854462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45454969-8	51.3050424351559	2.7555345389305	0.739156006121124	3.72794716691913	0.000193045833854775	0.00532044414132187	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716345901999145	3.04997081279711
Merged-chrX-38461078-4	11.5208021599935	0	1.2829563856105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125294215-4	12.7532740741149	0	1.28512213416737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118554564-4	8.28222217975922	-2.19736596967722	1.13947115200884	-1.92840860060683	0.0538043228954992	0.390971489937432	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00883436684376	0
Merged-chr12-91764487-4	16.3244732101776	0	1.29053362776977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111821352-4	22.743659238304	0	1.28288569053335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83144691-12	100.179071528606	0.538831488880748	0.17164607138676	3.13920082485681	0.0016940930320234	0.0284874429414825	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.02917527073673	7.56471232419169
Merged-chr16-93812475-3	15.6889004758759	0	1.28686395774095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87299172-3	7.95923188774144	0	1.30730201165697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122576683-9	77.417368898901	0.0679174709313112	0.231465717475633	0.293423456708923	0.769198498234503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37164146594615	6.44004261924787
Merged-chr1-180432055-4	10.3767725698215	0	1.28353049845099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119977129-4	11.8412734676508	0	1.28448352250603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69418218-8	73.2803343078596	1.51298664545495	0.278233495695527	5.43783070285192	5.39331835049685e-08	7.43526963990648e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74607013411949	6.25439392089262
Merged-chr2-156857488-4	12.5865931700446	0	1.28503024546482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117832383-6	29.3327909370931	0	1.27971300486538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91371013-4	19.3676644964448	0	1.28134549401037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128796669-4	14.531222778368	0	1.28177727137765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57947753-2	9.11871652995912	0	1.28787712382646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37231061-2	2.66079062986465	0	1.59509985008725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146671597-8	65.2768259548794	-0.531272570629252	0.162321403741962	-3.27296683235811	0.00106424965263561	0.0199382046448183	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.0847985686812	6.56821709398267
Merged-chr2-167744167-4	24.4224570830927	0	1.30956192361961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142098541-4	10.951925938068	0.973050133942305	0.833386758571191	1.1675853065035	0.242974079928418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	1.46928333126936
Merged-chr7-64341914-2	5.4492714991732	0	1.36908684416665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111156623-1	4.43984800932128	0	1.32543150647078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17878625-4	19.6195504891867	0	1.2908216368939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68443534-4	18.365659666388	0	1.29970698843836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38769764-3	13.1494712270443	0	1.28568604882355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40994094-8	97.2707918086936	-1.72657195718449	0.287693202622314	-6.0014346583334	1.95581648317328e-09	4.50016844751553e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.64931716180485	5.88310952728394
Merged-chr16-92801068-4	12.2459877476054	0	1.29072507799211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124704396-4	11.6013018168785	0	1.28367865928706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56884966-4	12.2611987551789	0	1.29652714309079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174041718-4	9.42374829907001	0	1.31247962533374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41369967-4	13.8848090559215	0	1.28226552564247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80009001-4	13.9456155445322	0	1.28804404108114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54642603-4	14.5816162171584	-0.563525443559265	0.419599980880892	-1.3430063613831	0.17926991401117	0.941383140547568	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32329961656703	4.45955806537768
Merged-chr17-35209953-4	11.3777193744268	0	1.28629562235812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120665936-4	9.89817984748216	0	1.29931346237313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96311683-4	9.96279458558545	0	1.30811170433102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45371795-8	45.7758980839894	0.246307069399514	0.256141690891626	0.961604760795176	0.336248179141679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07785640348492	5.28158625767522
Merged-chr17-17454863-4	16.4513531744938	0	1.29245444377257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8629397-4	8.3286692744735	0	1.29475835203371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76623482-4	21.3734443344469	0	1.28034691575239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66134364-4	8.14402287674762	0	1.29267937116326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97676389-4	15.2670691988949	0	1.28495294325396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92440404-4	17.5179066668647	0	1.28030216756477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55761233-4	17.8374771723385	0	1.32593043816022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166710088-4	17.7833370205406	0	1.28319684435586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7226782-4	20.8503813142424	0	1.28205036747756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113949888-4	39.3657123215059	0	1.30602778997674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54446211-3	14.5026817381732	-1.54867739804393	0.502774697334178	-3.08026121094669	0.00206819122322147	0.0332222280414528	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32009926006315	3.82432570933726
Merged-chr3-21633999-4	13.3741060575945	0	1.29608627365215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101781490-12	105.93342647004	-0.601828086363547	0.205146227566015	-2.93365417197292	0.00334997235030703	0.0482084464461823	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60953890418266	5.86411853760201
Merged-chr13-55432528-4	10.8970182404311	0	1.29114828192013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96562761-4	13.2845366876288	0	1.28377065307642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91178830-4	10.5191344978969	0	1.30051212666453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104742463-4	14.3088522145645	0	1.27916271444419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121371622-4	8.2811796814692	0	1.30165070220329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-18339327-4	9.97102733243945	0	1.29104271237215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75047936-4	41.197467295441	0	1.30087827901647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60268723-2	4.64276693427097	0	1.31287178664749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118259976-4	13.5679696496344	0	1.28695716632597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4080732-4	13.6455921387115	0	1.28540400739665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30587405-4	11.9008327720651	0	1.29306968125221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32705285-4	11.2660759229256	-3.75142218192883	0.862927287730695	-4.34732130420192	1.37810266422734e-05	0.00065398327303268	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44687314022765	0.733321818366247
Merged-chr15-97174814-3	8.59759236251111	0	1.29637891438107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12728997-3	12.9044814657477	0	1.30087901947247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30152283-4	11.1153460212986	0	1.30021922977196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129230442-4	20.3558328965408	0	1.30936920992768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31176552-4	13.0461282142311	0	1.28425973216509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91272972-4	16.5439331017431	-3.55555458433376	1.01996293502055	-3.48596450150626	0.000490366071875075	0.0108181446573292	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83173901486195	0
Merged-chr5-92491013-4	15.2288656839769	0	1.2893264780463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3420306-4	14.2363028051514	0	1.28307047126152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94955283-4	9.1370951015253	0	1.29382047921527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167007028-4	26.1856602266507	0	1.28373475712102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85367080-2	5.36552893031292	0	1.33671929508063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3025531-4	14.9443182835157	0	1.30438075208804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143146949-4	10.233897533282	0	1.29406154704763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111047457-3	8.06463606143991	0	1.29375446039399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43352021-3	14.8558662188775	0	1.2898720193684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150377474-2	5.2509058786571	0	1.31026194682448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128622670-4	11.2418111861238	2.43319379305683	1.16576622139572	2.08720560640681	0.0368695529196169	0.297772562734555	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr3-122964505-4	9.86345735163146	0	1.28597932028094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10476090-4	11.2137563830929	0	1.28953338270614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27725208-4	17.336502924802	0	1.28270478410568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98881266-4	10.6188619859932	0	1.28970755898187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130816114-4	9.60923652084522	0	1.28867887916382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60978104-4	14.9637118765077	0	1.28600049796205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3357010-4	14.7701579970038	0	1.29974937830857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108958139-4	10.0692571436351	0	1.29079187467739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152788960-4	14.2792010397001	0	1.2930788737364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119486814-1	4.64372252919756	-1.45177120184478	0.948506486534692	-1.53058647721929	0.125871625933908	0.734000291654214	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34593273501108	1.15307255889252
Merged-chr11-44415481-6	40.4275780036595	0.757820256566418	0.253087404870728	2.99430252941073	0.00275073049696072	0.041531708653973	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43428794678409	6.18031742018008
Merged-chr10-13832961-11	301.464034408996	-0.575195805908621	0.121895592561993	-4.71875802741671	2.37288860223047e-06	0.000159689782287696	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.66878361690862	8.10337333392287
Merged-chr15-79720989-1	2.72099583810391	0	1.3826735530723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91776521-4	15.1862835892275	0	1.28698058616442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103759780-2	2.58037723986689	0	1.5317980156245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88509364-8	95.5832353409981	-0.00532160690048313	0.229151113144822	-0.0232231335359907	0.981472285688877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64085150779445	5.59717270616815
Merged-chr4-130821118-1	2.66752121744864	0	1.40149652169919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143593751-1	3.10274732719243	1.682381405499	1.13154206590045	1.48680411996898	0.13706655306779	0.778057048938527	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	1.40264952818025
Merged-chr2-168578247-1	3.79059197206769	0	1.343221730499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62940569-1	2.38719594298109	0	1.41170160693937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42449305-5	57.3522586733564	0.392202042175712	0.400217281309772	0.97997278101578	0.32709955464184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42880113843474	3.93427423341103
Merged-chr3-136426765-6	43.1918689116371	0.848807275846056	0.253714256924806	3.34552455244019	0.000821270876851493	0.0162972264557357	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77367609623715	5.65961957584592
Merged-chr8-81806961-4	11.2288961228826	0	1.28737403545726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144007520-4	9.76605856153407	0	1.28403933284833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79786880-4	8.45198519605755	0	1.30674865407121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51931384-4	9.76460286583884	0	1.29962292389399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163761603-8	59.3452971554813	1.12218911432546	0.21982945189897	5.10481695983667	3.31114854188169e-07	3.33390312200001e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92449551944542	7.04925424060535
Merged-chr2-6471922-4	17.2301617082173	0	1.28062631709259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12006248-2	7.355157684848	0	1.30010073630615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75823442-8	52.3972538729689	0.571577181989462	0.252275947576698	2.26568243021142	0.023470834044141	0.212280293626081	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38162338884521	5.93972877737523
Merged-chr6-146162784-4	15.3493466673229	0	1.29043196202596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58463180-4	13.8739037742667	0	1.28914587730118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21081284-4	11.208789695351	0	1.2999758076367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81307721-4	12.253684412553	0	1.2882042833111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3481929-8	54.3618261642354	0.0439784435088923	0.220130832829538	0.199783205939841	0.841650136262939	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92914575032162	5.95887552117827
Merged-chr11-23855560-4	8.84370979953323	0	1.28872116716585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92667027-4	12.1319152861546	0	1.2855942416792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16034005-3	12.1718169320764	-5.68133917585768	1.00121450053295	-5.67444755627639	1.39136932679277e-08	2.36188380115775e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52591213192211	0
Merged-chr19-55218618-5	31.618332076718	0	1.28312173350198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30190543-4	10.8846798580475	0	1.29293713643615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83166858-4	15.8602130588554	0	1.28303884657952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170155639-4	8.34141750909253	0	1.29529377759134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135898561-3	9.40917757106903	0	1.29384094014914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82260329-3	8.89493221424026	0	1.29566275616919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51853518-4	14.0033016843759	0	1.29565803531597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56566176-4	9.5990692478765	0	1.28863983308981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36129538-4	12.5242695536222	0	1.30823332312895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113875924-4	8.98124644434186	0	1.30173565847134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92419225-4	25.482304784156	0	1.28782901454974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84722287-2	6.98748094743876	0	1.30766588017771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157069648-4	14.226144287555	0	1.27802600040724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154094502-4	12.2689261922535	0	1.28207602067361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46792119-4	9.45583024902153	0	1.30784167055598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13717151-6	33.211561075151	0	1.28168184543579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12229784-4	19.7093122699671	-0.464273842165059	0.390611106564572	-1.18858331051657	0.234603678529556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65418111879342	5.32170473756352
Merged-chr15-53104138-4	13.3989094903345	0	1.29862150321093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122650749-8	52.0076235822053	0.126622847343063	0.316924520535999	0.399536290625009	0.689498089077363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92639730955315	4.96122758000579
Merged-chr6-83598178-4	17.9585824754874	0	1.30078788308514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8574715-5	32.0381467897533	-0.121651906046447	0.581650388397122	-0.209149531184339	0.834331509328273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47093590650149	2.30868691370583
Merged-chr11-70489354-3	10.8086832084206	0	1.29033280676802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99165015-4	9.84272414877296	0	1.28828403494808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23332927-4	12.1725361670993	0	1.28505891265498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3183482-1	4.19104698245504	0	1.37504557240635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112990936-4	12.9875587997817	0	1.29737107888244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50038533-8	41.2798004477477	-0.604084772591997	0.222801754751758	-2.71131065940238	0.00670178040024755	0.0814955192269009	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1262987808608	5.51882248649629
Merged-chr5-114597884-4	11.7790470331722	0	1.29124473052874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54828009-4	12.5494437793408	0	1.2998951742597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113636041-4	15.7070605935054	0	1.29251803946784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83141533-8	45.0097197388131	0.662779845470822	0.260991319045748	2.53947084483161	0.0111020298181358	0.120199390864384	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81505304478418	5.4906595758695
Merged-chr2-71814204-8	35.2223245330621	-0.703351009518078	0.299237303393746	-2.35047903968239	0.0187492636089546	0.178289764502582	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14612945077099	4.46479308343871
Merged-chr5-146750018-4	9.70554417525291	0	1.29816569773572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12053439-4	13.7279528474515	0	1.28556695996214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137854083-4	12.5308741194902	0	1.29203664509949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107335331-4	9.30732500450664	0	1.28821290608958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75106800-4	10.4352261034087	0	1.28582828757551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73611640-3	14.42907071703	-3.90472369204329	0.829154936649893	-4.70928112400787	2.48592003631697e-06	0.000165929449124789	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57236082461702	0.73596151290311
Merged-chr15-34580066-8	36.9864307780018	-0.0438276005709548	0.31077475288639	-0.141026901844169	0.88784869012857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19998215622502	5.15628324313139
Merged-chr3-68708427-4	11.2695336566899	0	1.29495604190443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38259452-4	22.8612325389919	0	1.28582516713927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74471924-4	9.8927710582516	0	1.2919694095162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66304138-4	10.9608021543823	0	1.28888982428282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71980246-4	14.3873692863984	0	1.29127205974067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55308668-4	11.0004139091357	0	1.28386167546835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22701501-5	34.4083738904864	0	1.28480854178013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112623960-4	10.2765471289601	0	1.29050266690036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54900507-4	12.5341428699572	2.83301346092073	1.11649352578632	2.53742041085773	0.0111672757203239	0.120557872000709	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.10669213789164
Merged-chr10-13304075-8	48.6567849023761	-1.26333231734506	0.311279117835251	-4.05851933188045	4.93848458553377e-05	0.0018018437393986	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9679291336166	4.44755550837484
Merged-chr1-131068387-4	19.6465956318773	0	1.27902840231106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102700960-4	12.8121472881751	2.45180358797973	1.16709631918137	2.10077227361961	0.0356609614482865	0.291178456428806	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr12-38645544-2	5.02783247314604	0	1.38033196226205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94688668-4	7.95471691921684	0	1.30454007444746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38692243-4	9.74900919517606	0	1.29397877234674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161500518-4	14.5742070190013	0	1.29190278592582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59251275-2	6.40686931051292	0	1.37036787627672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133584536-2	3.62886766180701	0	1.35420635832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17136460-1	5.98899901410187	-1.09823122854214	0.785813990186637	-1.39757148925448	0.162241784930824	0.876258507156756	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65193301936759	2.43512432291587
Merged-chr5-66038379-4	12.444938816398	0	1.29134248555229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115480470-4	11.85734029833	0	1.29233618409607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95574531-4	12.7219355103876	0	1.29288779876654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43507993-4	9.55894082230877	0	1.29730286516764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126885721-3	10.4344320312216	0	1.28346498590788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20749657-4	14.7428239199416	0	1.29305388685596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115650031-4	12.6709371405186	0	1.2841895776226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63151916-6	13.9490609092939	0	1.28715813710078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90226618-4	23.0970385398675	0	1.27872325294566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45673151-4	12.8269693146634	0	1.28311299433439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69012511-4	10.3904292315906	0	1.29331830145993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-117487077-3	8.70397033716618	0	1.29767029774011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24471349-6	41.7686451485699	-1.03939881296494	0.391503892585682	-2.65488755705658	0.00793348484877632	0.0924432062995966	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49789101291593	3.55292144533106
Merged-chr19-9931520-14	124.908366508978	-0.166489775491816	0.195196836491765	-0.852932754875054	0.393696596148597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.83243336219281	6.67059649967222
Merged-chr15-30520257-4	17.1095359395903	0	1.28806943344713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34050622-6	31.7322336982789	-1.90975980145946	0.45367027177071	-4.20957669103051	2.55849588617858e-05	0.00107171456524503	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37491212328392	2.62400334963741
Merged-chr5-99327159-8	91.7861722809599	0.892681351637309	0.204179905184188	4.37203333419139	1.23094725302407e-05	0.000596717204718926	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4434680446024	6.30727292115852
Merged-chr12-32111781-8	40.7621333637579	0.268643773420509	0.236331400131701	1.1367248417722	0.255653331067272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1578176272101	5.44367921213843
Merged-chr8-54562323-4	12.319459129358	0	1.31941634463909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100119599-4	10.8622907290452	0	1.28685270073496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62294533-1	2.50331997793755	0	2.44430259433701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-61723185-5	15.1777231435752	0	1.29589933013901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135597180-4	14.396119321635	3.1301209082497	0.888255820991108	3.52389574521125	0.000425251533892546	0.00972645667964379	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	2.43014059632518
Merged-chr13-81793975-4	11.2119658363672	0	1.28604956705798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112507014-4	15.4104009307249	0	1.29064690723473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-98109245-4	11.0204526802232	0	1.30208467983303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10744325-4	10.3512692613143	0	1.29549394081194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6081510-4	12.9004822808752	0	1.30058382078748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62059228-8	38.8134198214382	-0.21341461161938	0.343432927338207	-0.621415696140321	0.534326147248408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29551878846428	4.87449462894489
Merged-chr1-92666856-4	28.2614635710583	0	1.28995440951047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16047921-4	10.3528200191699	0	1.28862956568867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108642250-4	12.4674210609992	0	1.28379217166439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12464175-20	141.897109518888	-0.0359245357867723	0.192976843054015	-0.186159827356678	0.852319426348775	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.37066460355056	7.31547073935551
Merged-chr13-10107032-4	13.3560263934713	0	1.29481481904434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119992000-3	7.48179999545767	0	1.30391055160336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25140515-8	77.1341477647626	-1.10641843235061	0.257752724882055	-4.29255765523679	1.76626665987301e-05	0.000800405417171023	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.93036085155811	5.82983228691355
Merged-chr9-118705697-7	75.3824127251394	1.55238846223122	0.279259958597749	5.55893680578571	2.71422941369203e-08	4.18311403931885e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19320870754487	6.70640263048823
Merged-chr8-83141016-8	46.9503500502269	-0.559338043197904	0.24234571923523	-2.30801701372323	0.0209981902160843	0.194546939429048	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82268186578231	5.24741493768085
Merged-chr19-41774423-11	77.7619787066799	1.28204426762847	0.243508169688242	5.26489221807155	1.40271626978494e-07	1.64563550027589e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39496484148573	6.54810557196375
Merged-chr8-124242452-8	69.4260295475027	1.09314849768009	0.280922134007039	3.89128646464255	9.97141219921069e-05	0.00316153275870753	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3526990007862	5.51041350964688
Merged-chr6-108537146-10	76.7011423265844	0.430748361187473	0.200180993614813	2.15179450061237	0.0314135431833293	0.265521846185207	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43357041689602	5.85396735677088
Merged-chrX-21568196-4	12.2488481511736	0	1.28485798455947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150486241-4	16.1254023304771	0	1.28809241326426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-39923354-4	10.6959690963205	0	1.29251874972142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124627894-4	13.1745864332835	0	1.30058337012835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77709148-4	15.6980707666208	1.09139708449239	0.493575907153798	2.2112041302541	0.0270217045073116	0.236285334234549	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58425068827141	3.47275255634029
Merged-chr18-38930580-8	44.7823011488062	-1.14777437962978	0.223195917232099	-5.14245239726415	2.71175164777338e-07	2.82189471333084e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31532331580845	5.17269766740212
Merged-chr15-25632373-4	14.3345463618941	0	1.28734146174805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72797225-4	9.08479800582731	0	1.29481784736451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16326084-4	12.384864246548	0	1.28961757874911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62164518-6	18.3320314008993	0	1.28266801171268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112264846-2	15.1225590950027	-0.983352563395954	0.495482079717155	-1.9846379993345	0.0471847614251194	0.355647070893158	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71345406782803	2.99783254049031
Merged-chr15-53556295-4	11.7285186321591	0	1.28718431116709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144943503-4	15.991477296428	-0.69010013843056	0.62516853289685	-1.10386256204041	0.269652761149849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75200727926811	1.88086620139027
Merged-chr10-85970065-4	14.1379161379373	0	1.28654402781976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101540153-6	23.2869566723258	-2.18588645380736	0.442721869381855	-4.93738079137444	7.91787751367498e-07	6.68820381597137e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91104071827788	2.35204052049844
Merged-chr16-93914262-15	128.35263621666	-0.1421535489272	0.167734199381635	-0.847492934960548	0.396720423370844	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40084305703775	6.27627556637794
Merged-chr4-40364417-4	11.1449393626846	0	1.30587339846128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123399114-2	6.23772149594812	0	1.2950296110191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-54003736-4	23.6566919536187	0	1.28267423445691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115267007-1	2.61897117898344	-0.205999846283865	1.39183925330049	-0.148005486837201	0.882338438066056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	0.382164212378408
Merged-chr5-150118499-6	54.4378243408086	3.01239894729022	0.408643975765027	7.37169547562931	1.68471505002641e-13	1.57270556655752e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93173167673335	5.1968144668742
Merged-chr9-32633168-1	1.60501062300929	0	1.49556135116189	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19794672-1	1.57600626772321	0	1.46614916779885	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142926538-4	9.5122996785829	0	1.28660980522146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35052025-1	3.40769341649314	0	1.31687891450796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25451364-4	8.52837577904293	0	1.38945337124805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54897006-2	3.13578091134885	0	1.50891598010227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54959778-4	10.4658573115449	0	1.30310968100648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79441634-4	16.4651580470759	0	1.28580681284999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70831828-5	36.1616394435809	0	1.28270109099753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65740528-4	30.7335211938427	0	1.28804026893155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117728502-4	11.4682721911162	0	1.28657043615181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12230166-8	65.6154716804261	0.438609216964168	0.186642310467613	2.34999886073676	0.0187734685301357	0.1784394290284	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60153596876242	7.07758141331878
Merged-chr7-141480968-4	12.7779506866781	0	1.28705487687894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83573303-4	9.27065005932996	0	1.29901320414435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53770334-4	12.376588608457	0	1.29827788666232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53415992-4	13.3398510120015	0	1.28836252413302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152810837-4	20.0642208730327	0	1.28581931746634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72272608-4	11.8637947527589	1.26132907047788	0.93714649847259	1.34592518089078	0.178326647027202	0.937861817033363	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.659012160579651	0.900948542443349
Merged-chr6-145139987-8	70.0910566117118	0.826129950714217	0.210001318954945	3.93392743829128	8.35690212521574e-05	0.00274831467677075	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9914897260263	6.88276802663781
Merged-chr17-73944939-4	10.169671890335	0	1.30575924482466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128379559-3	16.8644465891139	0	1.28455256448783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119377134-4	20.3690164072053	0	1.29824526756725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35633860-14	117.164683736808	-0.0660281510706433	0.196647810541495	-0.335768554395934	0.737045404806569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.02130776757343	6.93907233512285
Merged-chr1-156617092-4	13.7357327348206	-2.88230304610686	0.592348484515141	-4.86589080829021	1.1394241583419e-06	8.90631711136477e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8174924596884	1.9272926343824
Merged-chr4-141643711-8	32.6089263455357	0.282672257035094	0.314080121383984	0.900000470547156	0.368120000282257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81376164472703	5.01409089321149
Merged-chr16-20316956-4	12.0124635489426	0	1.29675587380109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13295011-2	5.21486385993754	0	1.31567706257699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157417478-2	5.42581971899088	0	1.34333638410817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30137316-2	4.12760236356545	0	1.3396008135835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46994955-4	17.5111473517223	2.44566999420393	1.15631019594203	2.11506393594625	0.0344244984338268	0.283634254779579	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr5-36720939-4	20.7038571442179	0	1.29737094067221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167895212-4	10.5829569512756	0	1.28757333115549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137582427-4	15.0477747207968	0	1.28895666264459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95367838-4	14.4829250069	0	1.28052928268328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35493572-4	9.60172524114606	0	1.30324416157774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62630186-6	27.5866928249874	-0.708259260817327	0.349646600273933	-2.02564320734832	0.0428013604462606	0.331818448181439	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58559374535794	4.04474562072845
Merged-chr4-148656138-9	46.7142089332038	0.474238113906192	0.258301000533811	1.83599023203983	0.0663591013172548	0.456789406370729	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37335209003937	5.80378880708545
Merged-chr8-14643281-8	35.5305826509334	0.0790277537139068	0.297000342858911	0.266086405669399	0.790172664419547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98791620184324	4.92360588856804
Merged-chr16-37682797-4	9.80457303711091	0	1.29121418618287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91182123-3	11.8725725764408	0	1.28883078992378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143023603-8	46.9735288608868	-0.182540277505724	0.327804671832937	-0.556856851627649	0.57762523712174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32707431353051	5.15598279309645
Merged-chr16-33591897-4	20.4860431753191	1.61658536194884	0.563433750737006	2.86916671185253	0.00411554814123008	0.0561450122832612	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46437595142484	3.26193464270395
Merged-chr12-108204094-4	14.9782889948049	0	1.29132912571185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17885459-4	11.1472080794915	0	1.28517838823672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61794982-2	5.71058676001284	0	1.30943429681934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66106595-4	13.633572885303	0	1.281973730701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9409225-4	20.3470454866285	0	1.28108586908543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63108845-2	8.31874364992823	0	1.35569764241208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94556467-4	10.7307198270735	0	1.28970962865289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47745799-6	28.0782307827664	-0.175952708624087	0.304320723583775	-0.578181816052529	0.563141374166188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.379720173717	5.21700416730748
Merged-chr14-87190876-7	45.8386297447082	0.836007896855038	0.264200752289258	3.16429037242007	0.00155461607725806	0.026705557882362	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61883628943229	5.44193538100185
Merged-chrX-71053974-4	9.13901668997177	0	1.32329438303413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30577810-4	29.9970148780587	2.17380546977887	0.818052263710776	2.65729411947135	0.00787706869893438	0.0919005411891744	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	2.09282686802642
Merged-chr4-123996034-8	51.195770361483	-0.681098902577129	0.249520581639616	-2.72963014955153	0.006340541559383	0.0782343332211936	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91488174830558	5.08845831488963
Merged-chr17-50499559-8	44.5501109770622	-0.52383238229686	0.256131739886388	-2.04516778174082	0.0408383196453212	0.320982390801455	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82288986020383	5.17094744417344
Merged-chr8-75226989-1	7.09625684010367	-1.14957780197126	0.749241425910868	-1.53432226544828	0.124950390764343	0.73032274015087	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10942793830916	2.65704874563126
Merged-chr6-101555401-4	19.7188077370561	0	1.28563751995919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90932914-1	4.26494415171833	0.402797975602219	0.771657703264712	0.52199048088041	0.601676958375227	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81167412866227	3.03717289800416
Merged-chr2-144720662-3	10.1307041940916	0	1.31828743599489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94370985-4	18.4968481546068	0	1.29053200562768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84617981-3	7.66958906053524	0	1.32694692479075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25548045-4	13.6332930370502	0	1.29250856909708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49047389-5	23.6925890230012	0	1.29754072567393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35379389-2	5.89355370839199	0	1.30575739661097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29772804-8	72.3577087908861	-0.158373685720791	0.257676887200352	-0.614621231424806	0.538804889752579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.51859812852199	6.17952603857122
Merged-chr8-85142722-9	95.3734296026557	0.687600955786349	0.19723731742487	3.48616055401516	0.000490006817574315	0.0108172906232747	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75271778019632	6.4375494951728
Merged-chr2-30591077-4	10.6513712942586	0	1.28751202957445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34480991-4	8.48336871062894	0	1.28951347193681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53566457-4	11.7539172601513	0	1.30165750344031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25897740-4	9.52160265640617	0	1.29320327708196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33125739-8	42.264066170368	1.08041392828579	0.263966873365067	4.09299058822268	4.25845011922794e-05	0.00160851260977497	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78484923015077	5.88659259521761
Merged-chrX-48428770-4	15.4937658979691	0	1.30003993102167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86943487-2	3.36936130814072	1.41008915702591	1.37004049724098	1.02923173429222	0.303370793342418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.683637474991079
Merged-chr2-118263576-2	10.9200097691686	1.31272784093897	1.29782902682587	1.01147979726539	0.31178684573311	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr11-114927701-4	15.4314655900672	0	1.30248975821514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97417135-4	10.8637158745901	0	1.29014542976908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37356766-4	16.0901950165983	1.57818151902056	0.469471662360306	3.36161188320958	0.000774889567073283	0.0155468018575286	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10435712644	3.91296185529155
Merged-chr6-134172535-4	14.8947207875268	2.0721050089727	0.593545578609573	3.49106300113762	0.000481102791535136	0.0106823455710686	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11139172742353	3.26397892821813
Merged-chr13-10107514-4	9.98764260236077	0	1.28396151070837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8865048-4	16.7361783521785	0	1.28206591974285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80852191-4	13.5981227489937	0	1.28573543678797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137292592-3	15.7972372666968	-2.38742490790946	0.681259674481863	-3.50442716241091	0.000457590724282005	0.0103073848565777	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99233099123026	1.46928333126936
Merged-chr15-79243343-6	22.3182950736861	-0.725207816677886	0.41167701631788	-1.76159413310048	0.0781378958997398	0.516435617018751	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39395303065718	3.67376140570993
Merged-chr3-107134671-4	10.9360792893967	0	1.30119748031835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97660252-8	62.4428047166951	0.521482522867632	0.278664048378839	1.87136634919868	0.0612943198125174	0.430727887135043	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77733904599008	5.27587580369447
Merged-chr5-32112725-7	44.8313188728024	0.776876546069254	0.292005302508669	2.6604878041425	0.00780275530141493	0.0911963598508782	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5329644219767	5.28437383319217
Merged-chr16-21719910-4	10.0972666557337	0	1.28392246270322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12499860-4	14.7944843076999	0	1.29389328268894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105999183-4	9.29871777729673	0	1.29684195478178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98754901-4	13.5844805699926	0	1.29629077101108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171130070-3	5.74164377444743	0	1.31201900207649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53633654-4	12.134096928507	0	1.29156349834765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31129669-2	3.72804049172357	0	1.35573931833923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76828601-2	11.1096521533733	-1.35128459040233	0.860485109494991	-1.57037533304369	0.116327817624686	0.694142778787572	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16622784181908	0.793480537552656
Merged-chr18-32395801-4	12.8232625862436	0	1.29201633280013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123891446-1	9.2922648031117	-2.15801735980971	0.672811494514015	-3.20746208619472	0.00133911710379843	0.0237640194046452	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89343743663219	2.32304776864408
Merged-chr10-40066639-4	10.6365160452871	0	1.29036826179335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35549295-4	14.9754329450183	-0.0222875823563504	0.32309666559542	-0.0689811586736051	0.9450046169701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0573160516515	5.09912043084031
Merged-chr5-25010540-4	10.1325914486306	0	1.29354636854396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148959529-8	53.6809104775495	-0.630582855180933	0.248286100879585	-2.53974287302839	0.0110933992279474	0.120157345590825	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60596686728061	4.94491287337422
Merged-chr8-117209318-4	11.6041361927685	0	1.285821434261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74442095-4	10.1614981800258	0	1.29936235000748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84504530-7	35.8211083646828	0.475605405873686	0.300812822895276	1.58106759311674	0.113862583534554	0.683112778520836	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53978297936396	5.88976530410634
Merged-chr16-30968624-8	99.6090201164661	-0.247948182093718	0.160864501546868	-1.54134802712504	0.12323210590392	0.723125466271333	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.54139376505634	7.29492489925849
Merged-chr10-82922160-4	13.0618034457596	-3.18498156549834	0.684867999753751	-4.65050428205658	3.3112436979828e-06	0.000209261635095149	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1144791656917	1.88086620139027
Merged-chr13-12575157-4	12.2237550766837	0	1.28856258237113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105047491-4	8.95177937245161	0	1.3053568228118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79539086-4	12.7981804924327	0	1.28821783249629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120682888-4	15.1384695028992	0	1.29372264572761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-53766737-1	5.92081807462386	0.0896112333219428	1.24504271463322	0.0719744248680991	0.942622261050488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.61242769162773
Merged-chr5-121722042-7	41.7597340594573	-1.17225579567287	0.304098074590358	-3.85486095974789	0.00011579542015577	0.00355414162775903	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27335364612301	4.1357369947725
Merged-chr2-120008839-8	40.574810414994	-0.429652801428466	0.282799896816875	-1.51928203038449	0.128691520902134	0.744860595648434	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26075449136625	4.60824287492742
Merged-chr2-168563415-4	12.7660066803433	0	1.2822367242332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101551658-8	77.1081985953016	0.40959484917736	0.273154894392383	1.49949665038395	0.133744837030727	0.764828049410161	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97988134260121	5.40029206713229
Merged-chr8-53496422-4	19.3502291135385	0	1.29934328076552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126696614-4	14.6100232613084	-0.208241935277148	0.511290298716456	-0.407287084851638	0.683797147354865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00597093383308	2.83556479495308
Merged-chr16-92676213-2	8.5592077087046	0	1.31854753392811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132653230-2	8.11235149409532	0	1.31239077804882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95965226-2	4.01733530643307	0	1.3735333622457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43036316-4	12.5521313972506	0	1.28698239659211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65484595-4	16.1346280660828	0	1.29017632082027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22748174-4	18.5598762838699	0	1.28378518915746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10945927-4	10.9146654469293	0	1.28365675978619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6259339-4	12.0235768699357	0	1.29250848684449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157139531-5	25.7531598383977	-3.39507130338192	0.509143035810742	-6.66820729065993	2.58946877469958e-11	1.15109813980625e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89015122047427	2.70071892797997
Merged-chr11-83714182-4	9.78053665635629	0	1.28858111541782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120629559-4	9.80820574822295	0	1.29026419950027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141672423-8	49.2687487009859	0.613160100697659	0.268018282867445	2.28775475365952	0.0221518071240468	0.203005100055398	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30960909564243	5.90081424994642
Merged-chr9-103208092-8	56.6164974147412	0.0487973858073737	0.239402178233118	0.20383016632312	0.838486218366932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2893194283042	5.32653672909712
Merged-chr12-70911960-4	19.4544814898117	0	1.2824713515367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164942969-8	88.6037961691427	-0.367685115521612	0.228817204872985	-1.60689453280277	0.10807750593607	0.657662745681973	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71661928709035	5.36743358696001
Merged-chr4-155770194-7	32.17125741371	0.000250846202929187	0.617781940980183	0.000406043275611441	0.999676024348274	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91843634184526	1.56070666783485
Merged-chr19-10495841-3	12.3981598401605	-5.17666818802727	0.990918527897681	-5.22411080455829	1.74993972717894e-07	1.98229036685969e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62197988634894	0.306240821987646
Merged-chr18-56531619-1	7.4589890509622	-1.05615669472816	0.778592485329917	-1.35649484759749	0.174941773620734	0.925048158198776	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80911382174817	1.41293295987929
Merged-chr10-34193874-4	10.8468299512788	0	1.2853219716977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80427921-4	15.4226732515753	-1.32262035398334	0.627201976319563	-2.10876305228581	0.0349650392955081	0.286930234560376	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07216020653723	1.354969417986
Merged-chr8-11473220-4	12.4771015928009	0	1.2844101175357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78887121-4	24.188143545485	0	1.30239530949419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55254052-4	14.8762334115195	0	1.30203427320639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54681768-4	10.9146506982485	2.81297630059411	1.1141997764873	2.52466062187024	0.0115810068399522	0.123979762936356	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr5-65326354-2	7.15983659674709	0	1.29396173188502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25268676-4	7.99363378288371	0	1.28430621561822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122112420-2	3.34886231001335	0	1.45228818569877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34760694-2	13.3285019908874	-1.56157231728886	0.622789693121132	-2.50738304525078	0.0121628825115292	0.128711857586783	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92088255415062	2.61924261089574
Merged-chr5-125364069-4	9.99780034976421	0	1.30446343744644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86344531-4	8.89900471135971	0	1.28544201588334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44415080-9	93.0407616220359	0.17674416685011	0.208515472247229	0.847630945297676	0.396643534848195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70256176130097	5.90923619373876
Merged-chr7-83863771-3	8.16552479089111	-2.26188184616595	0.807723023375651	-2.80031864971863	0.00510521839783816	0.0662573190516648	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6557695673422	1.62635771927786
Merged-chr8-86921165-2	7.22921888616986	0	1.30264657807569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128711603-4	12.1020961149514	0	1.28159496778278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70652320-4	10.7246019482134	0	1.298074848021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6459584-8	52.5105346871452	-1.13837901632238	0.329282715410279	-3.45714780353406	0.000545925333057086	0.0117580872821188	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.21020790336072	5.05505915932979
Merged-chr18-4009310-4	10.4222051329861	0	1.29177039753258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81431921-4	10.7452999220703	0	1.28553977559261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4190784-4	12.6553711830812	0	1.29340449028336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10287633-4	14.2095885045385	0	1.28309602278833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118513155-8	65.6585659792902	-0.402739443069419	0.244500645258265	-1.64719173908113	0.0995186412660531	0.618463635964955	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00854386424237	5.6149305880709
Merged-chr16-24637566-4	12.6454379820389	0	1.29358503546203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79520119-4	11.6719105180653	0	1.30227271699762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17409849-8	77.641322817395	-0.175074678574863	0.255071168629551	-0.686375804507839	0.492476158011191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32803291344577	5.13428760152212
Merged-chr6-97829313-9	65.022100293195	1.6215916563803	0.271603598994625	5.97043508400783	2.36621719537418e-09	5.11996122016295e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48720380404092	6.05473558598634
Merged-chr16-31066896-9	54.388335333397	-0.155537011449783	0.224522383781552	-0.692746125487033	0.488468887032193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71312212580298	5.52135481517591
Merged-chr4-149780647-8	65.8128691744623	0.991602034262196	0.292007873398129	3.39580581414743	0.000684268863811089	0.0140390057063107	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50997280226764	5.4586172814634
Merged-chr17-47441538-4	18.0431434635921	1.1338807701798	0.814942051246022	1.39136367849239	0.164115172904531	0.882655974371974	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18613085803411	1.68598010415578
Merged-chr7-12780686-4	22.6466221540777	0	1.29814324630261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32335811-1	2.02980690374031	0	1.61822481684922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37022915-1	2.7788648572139	0	1.3816249039544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108447381-1	4.95002313302939	2.07043794387045	0.693165682159681	2.98693082643622	0.00281793475463503	0.0423506818022955	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00855414784312	4.0359240131647
Merged-chr1-37472479-4	11.8343777084558	0	1.28135682918431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121255148-4	13.8764715166699	0	1.28657787864774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118910126-4	13.4384213055257	2.30872725834533	0.789016082970831	2.9260839014237	0.00343258349181743	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	2.63617674289933
Merged-chr18-67194743-1	3.80122225776733	-4.08119546777146	1.0629239591526	-3.83959307025607	0.000123238405424692	0.0037430736841255	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98630051334329	0
Merged-chr17-26497725-7	94.8259692166662	2.85906099966356	0.506123990873719	5.64893395930111	1.61445857664035e-08	2.68588376603499e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51866835976122	4.3163687519925
Merged-chr17-48043713-4	13.0290351874627	0	1.27894475586481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15671880-2	5.87817298429171	0	1.29525765854962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79356885-2	2.87941801239098	0	1.46001222900008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86596357-3	9.07006664371913	0	1.32931767535946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83109957-8	46.8174951553813	-0.122654564025464	0.251093483759276	-0.488481669014767	0.625208706761462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56428055011369	5.458756833582
Merged-chr17-28420565-4	15.5813859682871	0	1.29188155685255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65424890-1	8.67381380165933	-0.309231468726539	0.89056726461854	-0.347229772541655	0.72841870541765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62210305337496	1.38268966767817
Merged-chr9-23570353-4	12.3918689717691	0	1.29841445243797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51889791-2	3.62304953916436	0	1.34560275952979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124053752-4	14.7880672766273	0	1.2841320616484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87509293-6	26.9226232335609	-0.601318961899776	0.411040136635719	-1.4629203046239	0.143489187322466	0.802915262439963	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18618101152917	3.60029881927397
Merged-chr18-79759058-2	11.2286110911132	0.440419790359105	0.581436628158782	0.75746825884322	0.448769375252776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73270395250511	2.94950034359837
Merged-chr7-139131659-2	6.75846382342591	0	1.30876403536127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24348189-4	16.1368713064106	0	1.29269837257531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120629020-10	133.337354044001	0.159734933651704	0.192709893101777	0.828888081876221	0.407167739947478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.51935026448955	6.61462503799658
Merged-chr10-99204740-4	8.62917861092535	0	1.29906921357596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40229589-4	10.0440524168113	0	1.2871316581305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36303575-4	14.2376200704562	0	1.28595925476533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165946375-4	14.2637744283712	2.2182097388481	0.728477172941072	3.04499553485328	0.00232683764406096	0.0364365043586886	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993154488678392	2.85894914094816
Merged-chr15-98992692-4	12.4464056954548	0	1.29100162278653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79633648-4	19.7498471849446	0	1.28112721374835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93997188-4	9.08743950280834	0	1.30678669119003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124377349-4	13.9885985623817	0	1.28069642607027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42031225-4	9.06283031422752	0	1.29372680429656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53256395-4	15.1301976238744	0	1.28961498006746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64471753-4	6.956902968564	0	1.34319199483635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100642643-2	5.14224591905224	0	1.34440722402113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131680255-3	17.8872356358964	0.270194914167842	0.4420463707292	0.611236585252648	0.541042966268552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2898657932327	4.50987620327687
Merged-chr11-79305683-8	41.9788719586949	-1.87120205529308	0.384241238469675	-4.86986264864635	1.11675848131286e-06	8.74489988148668e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05438898175996	3.2180769473006
Merged-chr6-145830337-4	16.0792428141752	0	1.28832555359636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81155153-4	12.8076786150166	0	1.30700477582368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68473005-4	12.4843175470782	0	1.28875547950387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23592723-4	8.347839040418	0	1.28997837036919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100400551-8	36.624218330143	-0.106606858465074	0.261161855861883	-0.408202254932104	0.683125192815393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49632910881671	5.35724981086939
Merged-chr17-65726519-2	9.85020042805439	0	1.29993794285436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80138987-4	14.4271684919145	0	1.29679897976134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39781110-4	13.0585841391432	0	1.28281292625246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79330291-4	12.9495975352488	0	1.29616572073924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64156376-4	9.50639557315228	1.31214620387645	1.28333923187988	1.0224468879942	0.306569438210668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr11-53560149-1	4.19432023954333	0	1.3432578969067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105650911-4	10.4951108290423	0	1.28298554561032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167361788-4	12.0120070657859	0	1.28243303242347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64367791-4	17.539381232528	0	1.30172869597535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116433943-8	97.0932578711268	-1.16070483451898	0.193397860838426	-6.00164256981461	1.95331321081736e-09	4.50016844751553e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.92137617085032	5.79294621635037
Merged-chr9-44567796-8	54.2664294625886	-0.413130995226201	0.290137590394147	-1.42391406320349	0.1544713503194	0.847245665433229	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20959911948549	4.85826946103061
Merged-chr1-162563457-4	15.5800668527586	0	1.29652611675516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117168833-4	9.72844319551995	0	1.28697036401851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-15848196-4	14.6932611873753	0	1.28778805377593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33077306-11	94.6351446278171	1.35423920442089	0.245269145676803	5.52144135653085	3.36230034352581e-08	4.97087959837189e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54530181216139	5.8405434130342
Merged-chr18-54978857-4	13.3344389810331	0	1.29274441099319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181739546-4	10.1959411018733	0	1.28808633058175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145468913-4	20.7799275494755	0	1.28168588359021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119798352-4	15.4713586303639	0	1.29090800945579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37426044-4	14.6394548847446	0	1.29679442203192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-75127114-4	16.2701898056423	0	1.28469383169637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104570611-4	9.91513425108387	0	1.29044064103266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34538115-4	15.4426044841749	0	1.28222314777199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121748501-4	9.34905441207949	0	1.28939409996186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136497999-8	46.6834156023866	1.19056142786486	0.216262735546963	5.50516215775102	3.68828619465356e-08	5.34400775334438e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1454074644118	6.32538715019126
Merged-chr13-43775401-4	19.4390897830444	0	1.30270134736024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-117470665-4	11.9228011930896	0	1.29620334443414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126607675-4	10.6863063148828	0	1.29113865027254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92478489-4	11.0483007955362	0	1.28973728739835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8700379-4	14.2902808795983	0	1.28613945687451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146135611-4	8.69972976307712	0	1.2973606849728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131974270-4	14.3883144438739	0	1.28665048667113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-67587626-4	12.9368050384306	0	1.2857153775851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8630042-4	15.1529881090798	0	1.28089012456977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61489725-4	10.1833966447837	0	1.29524024220804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78791659-4	10.269122091074	0	1.29176888774192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94776501-2	5.93042955561117	0	1.31610016157463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101381961-2	5.13935540201951	2.4868226282174	1.20850797276789	2.05776269934052	0.0396129183171814	0.314220169987198	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr7-96539394-2	11.1899750642275	3.52341501239971	0.987024361704673	3.56973459734518	0.000357343080002285	0.00852535264907971	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	1.78348390616087
Merged-chr11-20193273-2	6.70957173344301	0	1.32009941467555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10408377-4	10.3374966976432	0	1.28350942049945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118665684-4	13.1459144384539	0	1.29152391028884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17878617-4	9.34576765626693	0	1.2911711622826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34536066-4	13.8981891930006	0	1.28677659868854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69613458-4	11.4410285241871	0	1.28701734276072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132212496-3	16.9112970636583	0	1.30874177305186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12478545-2	13.5146331233214	-2.64316773066303	0.613105419031483	-4.31111461196741	1.62433680451892e-05	0.000747492343859813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93148208291853	2.16286647593625
Merged-chr6-52672811-4	20.4349833841316	0	1.28930272281048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59120686-4	9.38726911968767	0.412577980832106	1.18051250146418	0.349490564750808	0.726721053037918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	0.469435083901436
Merged-chr19-10510962-8	53.3478342613324	-0.292508544013049	0.234656424556264	-1.24653967845195	0.212566331640825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74324430710999	5.36983680614918
Merged-chr9-66383587-4	8.59942178383136	0	1.29714590360569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132247691-4	18.0420168789965	0	1.2831534782093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160360641-3	24.7288550206381	0	1.2849881473048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17408291-6	41.2821995944812	-3.60285763044953	0.446154377637099	-8.07536093118891	6.72773446141812e-16	1.29303098857597e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12209259169159	2.73430231295182
Merged-chr1-149891268-4	14.9851080639821	0	1.28977117970458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-6406584-4	11.0639078578978	0	1.29927191208699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126110863-9	73.4998784073928	0.0122662522095486	0.302297285469493	0.0405767858302073	0.967633291135151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29640167777866	5.32832393751154
Merged-chr8-35654430-8	37.9548174267388	0.623706490012766	0.32092884774695	1.9434416519158	0.0519628188169644	0.381266648238735	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62307464112652	5.24794999376712
Merged-chr3-96578340-2	4.53025031592774	2.66419746757417	1.18709887437437	2.24429280920535	0.0248135679163475	0.22151194112864	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.47954504644696
Merged-chr7-123455295-2	3.81709161579837	0	1.35504721307726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100314450-2	3.42999634925475	0	1.51937016587609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83742354-4	13.686178353027	0	1.30144818791623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96910113-2	5.06068027109966	0	1.3150072059535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11293403-2	3.31476119642173	0	1.37499106244107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60273913-4	13.9265549381871	0	1.31260287444011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99739167-4	15.4548212731911	0	1.2783632806498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36208678-1	3.89712905959212	-0.0394459790305712	0.932750236372098	-0.0422899694820717	0.966267541327933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25762182619703	1.38660038197036
Merged-chr6-8339669-4	10.7417162515268	0	1.29277053883448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126305619-4	7.28920861049198	0	1.28610440494855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93946092-8	91.2439180218608	-0.867439175408223	0.293763132349591	-2.95285241708252	0.0031485245089869	0.0459967544297469	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2687923055867	5.314436350909
Merged-chr2-167951456-4	16.2086926070613	0	1.28300841186695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47365263-6	29.2131078486689	-0.66500127080234	0.400587160717053	-1.66006636261628	0.0969011029196376	0.605826585475185	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12399826977478	3.70381930644174
Merged-chr10-96075604-4	9.33681593462716	0	1.29622778469722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75268053-4	12.752993880493	0	1.28445601569965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36265419-4	10.8069741475443	1.00647670684353	0.745851455929425	1.34943318651746	0.177197867309636	0.933436437105699	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12710965379399	1.82166021832917
Merged-chr4-132962834-4	13.6526356933026	0	1.28345316885559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97355281-8	53.7989296695397	-0.626110576611678	0.252175613408387	-2.48283554523459	0.0130341246498951	0.135280798820211	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65969964100054	5.07603338364225
Merged-chr3-158062396-4	16.5440311339227	0	1.2892157393292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4920783-4	8.68258677674678	0	1.28988681486648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90216483-5	28.0586149291057	0.515312833214395	0.494438161394685	1.04221897387699	0.297310168167774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51290558110662	2.77752175629353
Merged-chr9-105034163-2	16.3883728068672	2.8642007091091	0.433358725666759	6.60930665397883	3.86124149152234e-11	1.63842004224038e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6483559760141	5.3043850388071
Merged-chr12-35833497-8	43.9592453721163	-0.349957816107796	0.283246997569489	-1.23552171465451	0.216636400011082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28350028884489	4.64559400838592
Merged-chr8-86873267-4	15.1054901227334	0	1.29826617828845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41432472-4	10.1939671575141	0	1.29400826760088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79927794-8	56.0394476840101	0.21517982787765	0.207574906379768	1.03663699832758	0.299905063645442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17510181070078	6.35787102509515
Merged-chr3-41412861-4	14.3188329211756	0	1.30189393055408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38982273-4	10.0060580273603	0	1.29423250601952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32564641-8	77.0441260132434	0.245465916957684	0.248043921410596	0.989606661440234	0.322366412751654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43449877233267	5.64921523967539
Merged-chr2-167771776-4	12.3900689124465	0	1.2916903830511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79321858-3	12.3811603392316	0	1.29529587511841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3308525-4	15.7770412004065	0	1.28834213011339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184615490-5	19.9617368543672	0	1.27627277096775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19872995-4	12.1856298208526	0	1.287286679497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165751374-4	13.1301436501431	0	1.28947216767723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56467380-4	10.6658001642526	0	1.28906364304921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100432057-2	3.71700804941666	0	1.3363505991008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34495507-4	12.1746318550623	0	1.28884948604239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12833306-4	11.064671129229	0	1.28179844481854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83131901-4	12.8840937766806	0	1.31900070088619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21036346-4	13.2257015534089	0	1.29399452285888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121741091-3	10.879576939288	0	1.29242526630162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106031807-3	10.5493081327357	0	1.29086442934675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20803744-8	28.7698309326912	0.310823792264002	0.283953559742586	1.09462896871508	0.273679218996531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44394564581081	4.74581172624082
Merged-chr2-29661910-4	10.5084200347941	0	1.29788215689884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53421424-4	20.5833676535501	0	1.2783241031914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101412935-4	13.0931979028631	2.58678178410832	1.0805891813254	2.39386237509384	0.0166720032042539	0.162531511470263	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.29948469469889
Merged-chr5-124075094-4	23.113597462562	0	1.28741929796397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12344703-1	4.72495197839628	-1.31598625596878	0.941391252965739	-1.39791638367461	0.162138178133625	0.875916120066124	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35995287127487	2.22392366263603
Merged-chr14-55696808-4	7.95269182811554	0	1.2935530587946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143803740-4	11.5422024713758	0	1.28712860041945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8624739-4	15.2534331060971	0	1.27922801503713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156450737-8	60.6420216161017	-0.162300358922948	0.219099195738833	-0.74076200223213	0.458837758086983	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47286453513222	6.31814291334894
Merged-chr10-17698099-4	16.136106756591	0	1.28952799705089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142490643-8	60.2199132185285	-1.03691353802883	0.178236302212981	-5.81763381059032	5.96864783142597e-09	1.15735092341947e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.03986750575974	6.00038520340672
Merged-chr18-12188818-4	9.2274467437693	0	1.29235142731026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104139772-4	11.9947028172396	0	1.28952661033408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80731279-4	10.0637887589015	0	1.29212340056068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125735959-4	13.5048709203856	0	1.29098881769938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100143963-4	11.6661637402418	0	1.29083113724867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55747395-4	24.7615967389933	0	1.2826264119751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118279704-4	12.3250918238864	0	1.28619889351454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75845966-8	52.3766447869634	-0.544898695510153	0.239170975651367	-2.2782810248031	0.0227098394660617	0.206953689073992	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62544406175721	5.05953816393629
Merged-chr7-29492086-8	57.2272542236725	0.35014631172194	0.217350127247416	1.61097817680759	0.107184479073629	0.654007705596279	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16904593175247	5.43681699832826
Merged-chr10-14053283-6	23.7564744087443	-1.20359273522289	0.429106533229015	-2.80488093752824	0.0050335169256637	0.0655219515984901	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65510241549033	3.51925904886557
Merged-chr4-46630555-8	66.4794636337928	-0.740500731899913	0.255909654185553	-2.89360217478546	0.0038085035733106	0.0530753837708583	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.09776704929676	6.30402019997663
Merged-chr18-34538369-4	10.9999507662694	-3.96950017182708	1.03228714982459	-3.84534494350879	0.000120382969695554	0.00367080986361439	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52971537130409	0
Merged-chr10-8768930-6	40.8649285959618	-2.61985577461579	0.521432916556321	-5.02433906919033	5.05169192615528e-07	4.68903211088839e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11557848453777	2.18907334447161
Merged-chr9-96395381-10	86.1487284307209	0.684534375445196	0.189968894080635	3.60340243468826	0.000314078673161632	0.00774190304655602	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77595226541649	6.49542574937714
Merged-chr18-4908359-4	15.3329022764393	0	1.31269252407118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54519576-4	12.2285365849722	0	1.28013565680978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-89162556-4	16.4336930514098	0	1.29349852532053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31400360-1	1.95283000442181	0	1.45701561615285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154286591-1	3.50074635775828	0	1.38150012198105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137830383-4	10.9102160395209	0	1.28437024249133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54934059-4	11.9540755870381	0	1.28812706608507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94273797-2	10.7145093127531	0	1.29253569050672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27976474-3	7.82508973773919	0	1.34479916748635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166127355-1	2.10674898536568	0	1.5590018301995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110770079-2	4.14373602998341	0	1.34252252760013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14132410-4	13.2695648728113	0	1.28616108501458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52120358-4	15.4753733483898	-0.147448572038939	0.773770189539724	-0.190558610337067	0.848871420050743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6347504284007	1.15307255889252
Merged-chr16-24625194-1	3.95352825459734	0	1.31048419283441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96231469-1	1.58845739408627	0	1.49218249573065	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55430819-3	6.62222289056803	3.88529898973305	1.08306276952443	3.58732577562338	0.000334086815528499	0.00814294556043464	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.6342703608096
Merged-chr13-59875923-8	104.923823304494	-0.254321743827193	0.25506751570211	-0.997076178544869	0.318727534794542	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29802143327636	5.06739673657722
Merged-chr12-117479191-8	51.5719229972682	-0.591865019083707	0.257287317038121	-2.30040495542971	0.0214252883494153	0.197700662727672	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23109931314476	4.63086394735638
Merged-chr6-83008780-8	62.2631099188532	-0.32536983247756	0.217487173403998	-1.49604147860785	0.134642846518427	0.76828252258061	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87509125158502	5.44944612260649
Merged-chr11-69931163-4	9.4790468407266	0	1.29197430334461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91485111-11	51.901080937268	-0.650917440393983	0.267987381421204	-2.42891078282122	0.0151442584659739	0.150741312066646	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35158332656921	4.74316698334105
Merged-chr7-45099020-7	29.5241662489358	-0.668095286428984	0.308820212083812	-2.16337940422004	0.0305120103389933	0.26003011194526	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53574118032523	4.81195487683729
Merged-chr19-53303567-4	11.6111434797246	0	1.28211974154418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99382694-4	12.9591902043819	0	1.2914407758784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30850458-4	8.62866878154981	0	1.29083480785695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90215413-2	4.68685994817308	0	1.31985760773532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80754220-8	39.8989798042641	1.07129084189018	0.264863494233695	4.04469043568892	5.23923063093032e-05	0.00189150698789377	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87247751117712	5.92163980979454
Merged-chr2-154992761-1	6.71014375880794	-2.79833823681569	0.710495095391626	-3.93857502320019	8.19669652503668e-05	0.00271063426682716	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61258976984	1.8405601103675
Merged-chr17-10392557-3	12.6618157500589	0	1.28741653855915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139166455-7	68.0070032973234	1.169684892173	0.270638631825596	4.32194356098712	1.54660755722561e-05	0.000717279044957164	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37466259111018	5.37067459261208
Merged-chr13-48550742-4	7.91162771950341	0	1.30626389627421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72449602-2	8.87459783338884	0	1.30127666162238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37793104-6	37.4610602439648	-0.628906960821138	0.371360211532494	-1.69352273423645	0.0903560112588735	0.574470121786568	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.90073461353331	5.20690156123302
Merged-chr14-27123712-10	102.499985985574	-0.779113383490099	0.240520605041249	-3.23927916012219	0.00119832224539999	0.0218364655459866	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.66068386232053	5.86965010966344
Merged-chr6-34293038-4	7.59241996301219	0	1.28712705606246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73547433-4	14.3065891936535	0	1.28367603410668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97394678-4	13.364734335968	0	1.2874216686058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134785118-4	11.0985811099236	0	1.28652242275074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-118296410-4	12.8490295369927	0	1.29642184691733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94711516-4	11.8104734751274	0	1.2899774816207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48975217-4	10.9330086156613	0	1.28434485484911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21066582-8	43.6388671202415	-0.246980145685051	0.281433869176594	-0.877577906339612	0.380172823429972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68373160679306	5.50423446611211
Merged-chr3-31342754-4	10.632178488337	0	1.28473531893603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91231990-4	8.04711051287453	0	1.29468374054366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118135449-4	11.4640048114051	0	1.29195658836484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105926569-4	9.9650475790187	0	1.28908442458036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120118390-4	12.6436518799058	0	1.28631734738421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56744411-4	13.5462844957204	0	1.28266303156105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167227373-4	8.85825056797248	0	1.28241675562361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41311293-4	22.4113107384575	0	1.2858046124435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7632727-4	10.3446972923672	0	1.29027224519322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85519748-4	15.6385135011165	0	1.29769528953164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143130579-4	11.3215209019425	0	1.29939880594396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19968895-4	11.7147696873556	0	1.30374630023893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19068543-8	41.4506450768133	0.216189909878263	0.239562353994583	0.902436907441439	0.366824822821596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36363794689129	5.53436447014713
Merged-chr8-34918653-4	13.6585830220049	2.46266883194068	1.16816708414863	2.10814776872051	0.0350182095883946	0.287150902847755	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr11-87461936-4	13.7725808841321	0	1.2891949616642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32506857-4	10.6135371196234	0	1.28972332792451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108997945-4	10.4646536821793	0	1.2953128891512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4332909-4	10.0281447998757	0	1.3072521255032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101653631-4	13.9709356022811	-1.93527885183168	0.77909653325771	-2.48400393175864	0.0129914373615419	0.134923468821888	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90063012846656	1.29281866668399
Merged-chr10-40094933-4	21.5976749835616	0	1.29122980936664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126666588-4	25.5562510647414	0	1.27972056041114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60710156-1	3.83974073387524	0	1.34875494204135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144299330-4	9.3059714545921	0	1.30689939496884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7857350-2	6.01898432396346	0	1.33264348080815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139198188-8	39.6253974961201	0.889100721518271	0.271139628102808	3.27912495764415	0.00104129516754823	0.0196433239083738	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39213011033328	5.32370049938039
Merged-chr3-98057211-4	17.1432996083903	0	1.28776717144176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94162733-4	11.7834548213584	0	1.29001405834406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120425002-4	9.14647085261603	0	1.28671232410146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31342187-4	18.6391818540858	0	1.28611404190961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31038590-8	61.3157201503122	0.27986165868083	0.230730756060848	1.2129360795187	0.225154260063563	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1964727575926	5.43785836819306
Merged-chr4-126110208-4	13.3006760821637	0	1.30310517577402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62005156-5	14.194087670063	0	1.28758679963573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40435573-4	9.77999242048964	0	1.31424280201115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17770770-4	8.95743905720845	0	1.28907335587968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56264475-4	10.1073853159512	0	1.28980580817173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59316808-4	10.7044573054177	0	1.32042623568682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62374973-4	10.7999256174432	0	1.28793812278254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40392531-4	12.9855879283231	0	1.30385076684718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114742876-8	70.5761410242938	0.971921095392947	0.244573594933216	3.97394124111535	7.06930100248897e-05	0.00241605932692806	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50892966848576	5.4350388766044
Merged-chr2-60892369-4	9.94839220134608	0	1.29622923701236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13347394-7	24.7478448716825	0	1.27641020025744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150922321-4	11.4071414589968	0	1.2914600089889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93963208-4	15.0439690357466	1.39837553741822	0.837928093265133	1.66884909177494	0.0951472908012538	0.59720438619717	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.674898740693665	1.40000983364339
Merged-chr1-40393421-2	2.55656027442409	0	1.49637488134026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11187387-4	11.0243886690734	0	1.29250969488263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55574765-2	2.49571924510615	0	1.59358187803595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61330934-4	11.5151315824032	0	1.28584549592482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120043265-4	26.7885576527237	0	1.30019979198582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135313572-2	12.2598451620593	0	1.29112926671426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36025057-2	2.55385015415719	0	1.55069318315148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17766631-4	12.9177493894503	0	1.28483876013989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78487880-4	9.76752000341921	0	1.28439368349353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64210955-4	11.1518985228814	0	1.30405938543927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25370405-4	11.0116536190235	0	1.29431094683183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91302313-4	16.5425519265531	4.09421905800458	1.00080412422993	4.0909294425169	4.2964784151291e-05	0.00161633666387465	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.95160684218358
Merged-chr9-105123582-2	9.24168787550001	-0.883472673564404	0.421244038617848	-2.09729418714905	0.0359675411223892	0.292949637564956	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58092346176451	3.57893522550495
Merged-chr10-20834721-3	18.9133306927755	0.83528758264014	0.560894084618019	1.48920733084391	0.136432780979977	0.775651340344317	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95226161891889	3.21486150294643
Merged-chr2-152112114-4	13.1934258346693	0	1.28787383626583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39650161-4	13.8243952760073	-2.94187426732204	1.04475822935235	-2.81584215818593	0.00486495619680187	0.0637637891258417	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69112517750379	0
Merged-chr13-111655439-4	13.4309091939915	0	1.28735787208883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4493309-4	10.8602306226178	0	1.28620260649031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11929732-5	39.9386739549174	-2.60424537398412	0.499452518779134	-5.21420010124278	1.84612104895931e-07	2.06250349273711e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13898210719855	2.2046848628481
Merged-chr16-30024897-6	45.5474965685984	-2.11916516202006	0.351807516384935	-6.02364947683878	1.70527471301603e-09	4.02284770385364e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91552932523787	3.83547202501241
Merged-chrX-107330073-4	9.85920876417513	0	1.28610379616423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100110201-4	18.0300369140599	0	1.28312939417471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132180899-3	5.42781686214767	0	1.32269712301957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126833647-4	15.0108707817626	0	1.28868416878252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16296971-8	52.6204312829405	0.0261409654215968	0.249847638874587	0.104627626418029	0.916671292303077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14482566473793	5.142388296675
Merged-chr2-11212202-4	9.87361945836751	0	1.29032835066535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77786217-8	35.3116195772346	0	1.27525345930769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96807429-4	14.4521053407121	0	1.28287785019484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45699041-2	5.59608523865075	0	1.30944895916155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33878351-2	7.04694308534413	0	1.3050395845563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111721217-4	16.3067122073385	0	1.30115519380455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170217717-4	9.82645876884537	0	1.29623569496184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129810405-2	4.88084902563566	0	1.31370055875501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129948587-4	11.0631892193614	0	1.29700729715952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97673061-4	11.7430911824097	0	1.28022637316703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-81973825-4	10.4816002219904	0	1.3032755002381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79141686-7	43.4052377467246	-0.527275311547691	0.271007279335055	-1.94561309512208	0.0517012328073539	0.379902030701602	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53019616191644	5.00608169993613
Merged-chr10-13935553-1	5.81409535693497	0.21483910798601	1.31884019414764	0.162900030602162	0.87059714673308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.306240821987646
Merged-chr7-118482574-13	96.6577827002496	0.399453867069626	0.180205379225968	2.21665895205454	0.0266464057929628	0.23369158944396	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.6047931974331	6.96439135355378
Merged-chr17-30570355-4	12.9076843420393	0	1.28365536805363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110557193-4	7.4263142316025	0	1.31910360262227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96338798-4	13.923878658272	0	1.29715590743661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81997379-2	6.70401561114622	0	1.30235474341235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-81572187-2	7.4071189436441	0	1.29770571053594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135196553-4	9.26498741871223	0	1.29385194626997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84850641-4	8.73903772764421	0	1.28357525630588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121507516-4	8.85497736740345	1.93046780765727	1.25142352277372	1.54261748522872	0.1229236130349	0.721768929587438	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr7-104400924-8	80.4142790463897	-0.933660901351709	0.257584151004038	-3.62468303159332	0.000289316065124633	0.00726302250927171	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.78467959292707	5.74516997681916
Merged-chr10-20076935-3	12.5807422115181	0	1.28606741418714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8007453-4	15.7315794786186	0	1.29550413201275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25058005-7	38.1328074232868	0.360571900346619	0.244480340905646	1.47485028452974	0.140252798783491	0.790522109799014	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6479157561287	5.9273349785519
Merged-chr13-23518159-2	8.51309322987767	0	1.29852245940497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103159210-4	8.4547738488701	0	1.28584804666031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120754867-4	9.06192888172537	0	1.2884635230114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94994963-4	14.745825874625	0	1.28324263804532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110778038-4	11.9362519359789	0	1.28935767681142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150227378-4	13.656952853525	0	1.28160910316573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81102310-8	72.9128580285438	0.486316093984867	0.212768924205827	2.28565377110437	0.0222745217604953	0.203944360229974	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04816759086977	5.62342246847111
Merged-chr14-77794704-8	90.7710507510334	-0.228473286331665	0.247934890149886	-0.921505183048438	0.35678673645814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95481384996966	5.81573768118247
Merged-chr6-134135067-3	10.2947109741073	0.456825371682729	1.19160808656003	0.383368807945493	0.701446327545646	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	0.61242769162773
Merged-chr10-117899671-8	70.2500601367062	1.26111344343761	0.280136857714377	4.5017762165499	6.73879143000058e-06	0.000370355815630629	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31576831556986	5.62063141152439
Merged-chr14-63111819-4	9.84076681675044	0	1.29368768349241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59238813-8	72.3953546336737	0.148769937210741	0.234721561705003	0.633814533825039	0.526201867062024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26285019708583	5.34200014088989
Merged-chr5-77460526-4	10.7407827495356	0	1.28659022895015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3894935-2	8.69419983438192	0	1.30459063348888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43019992-2	6.78458208150308	-4.67469805783783	1.01135307175289	-4.62222164385734	3.79652055320716e-06	0.000232913859137154	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72844215276937	0.688405034366054
Merged-chr1-64407491-2	2.13308766793055	0	2.4332485529674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103939738-1	2.90224844315765	-0.0766559756856536	1.14083566405643	-0.0671928289943977	0.946428193857854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19745807053211	1.31470332505763
Merged-chr14-25527501-3	13.0253328739979	0	1.30742628163894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52952403-1	2.85187051824302	0	1.42875489351588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127603193-1	5.83585947052647	0.104553389091878	0.745321800174965	0.14027952632988	0.88843913998598	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05337725042456	2.62235589016187
Merged-chr15-63155923-2	2.14536657235145	0	1.54007764286364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6889649-4	29.6975695095462	0	1.30302891069826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122575062-1	2.58698650815634	0	1.4552928295662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14635481-4	12.5534152297134	0	1.28313789215187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-47510-1	3.6197441615094	0	2.43325231699677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114520311-1	3.36024958650696	-2.68884088361495	1.20072971709676	-2.23933899971784	0.0251338671429368	0.223704849905604	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09465966716934	0.423054662900563
Merged-chr1-151036689-3	13.5908525129396	0	1.30432285165685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26442818-4	12.4781262043918	0	1.3028210264877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183669097-2	9.00053981372607	-4.76721869727244	1.02483383103916	-4.65169918565099	3.29211074239907e-06	0.000208657874464413	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43678643438254	0
Merged-chr14-72589666-1	2.85877816949803	0	1.41711289882034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84070368-8	33.8429475938321	-0.200812104108936	0.253228352834622	-0.793007978218307	0.427773174506533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58866287117825	5.29790144412098
Merged-chr1-161076451-8	68.8881840341899	0.325109479205046	0.206186799723006	1.57677154716889	0.114848100777018	0.687258607451925	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39186768342262	6.70714809691775
Merged-chr4-6222234-7	127.660913719765	0.462051552702113	0.214676242207835	2.15231805788172	0.0313723125298717	0.26531061661408	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50667291800458	5.95995924442148
Merged-chr1-23983299-4	15.8607844141259	0	1.28602223641257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167769959-4	14.270915231004	0	1.28829488160983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66189033-4	9.17869227468194	0	1.28424709597894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48856746-8	24.2728077434757	0	1.28107533299013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65136388-2	6.24918853548196	0	1.29903602564735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126630286-8	49.9442264078473	0.825458613698001	0.237277535232196	3.47887385499947	0.000503525547672175	0.0110266020235208	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57963104048408	6.54054347379582
Merged-chr11-68475852-4	16.1404007257548	0	1.28837242658549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78219363-4	10.6235073382015	0	1.28942949834862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94107311-8	39.3103835278437	0.0868383917034296	0.321437511191088	0.270156371549946	0.787039955550833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25416338918108	5.21196692784746
Merged-chr7-43346382-7	35.7170670842783	0	1.27580470447869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79258971-4	16.2734243829894	0	1.28468274770493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6459810-4	14.4808469694163	0	1.301934551407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39680829-3	8.49252418593874	0	1.29098578112063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167716982-4	12.4049687196364	0	1.30019157838368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67386141-4	12.4371655516729	0	1.28178307983838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101252798-7	56.2724726631487	1.64166164173689	0.239734411101379	6.8478347943244	7.49760759434099e-12	3.91950932687845e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5921219272738	6.20750443551711
Merged-chr7-35171992-8	36.6440114456253	0.595451482079046	0.273599917691631	2.17635841086095	0.0295284710403988	0.253257313112732	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93196635264839	5.5168770607004
Merged-chr17-34341189-8	49.7819657910481	-0.858759159340839	0.232244394461726	-3.69765290280176	0.000217602149607595	0.00583960167074246	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79241631782386	4.97877987405772
Merged-chr9-66882049-4	12.2092301525813	0	1.30631261165832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33531358-4	18.0887831057232	0	1.28491356391903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21079964-4	9.81152460499385	0	1.28429640103379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67604604-4	10.3310094648902	0	1.28438120647928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118768195-4	10.9595803160266	0	1.29191240861379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60982134-4	13.3822658897534	0	1.2857589071182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88668780-12	137.21177404135	0.412891009291694	0.194832160135555	2.11921383515136	0.0340723995906075	0.28172782786889	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22725502561955	6.6514394003287
Merged-chr4-87683044-3	19.5873101754226	0	1.28781448378415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34886672-4	17.5332577225733	0	1.28789119637994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82151189-3	14.625141602563	0	1.28154605612581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57530837-4	20.1364512115251	0	1.28576208597629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39666370-3	9.54531062981765	0	1.32505253516582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101375092-4	10.1259626320283	0	1.28493037104798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102055159-4	21.7718279320257	0	1.28904359784113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113444691-4	11.9766415091903	0	1.29146256172521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50061905-2	5.33771849936461	0	1.31136984711115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157153413-4	9.82854263127859	0	1.28630718214327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165667601-2	5.47691099135347	0	1.35574798542103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58116931-8	34.9138697165564	-0.353661474392298	0.2518858844001	-1.4040543607062	0.160302662637605	0.869161781672495	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54200493888483	5.11521696137156
Merged-chr9-110938062-2	15.8333979645561	-1.87736266003977	0.419275171752949	-4.4776385212382	7.54732550867946e-06	0.000404252075975548	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42265015501703	3.29969394493008
Merged-chr5-101968276-19	291.588891962566	0.464614274268075	0.118532640682565	3.9197158824153	8.86534186795134e-05	0.00287501056924639	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.00022695465243	8.43861859639728
Merged-chrX-121401228-4	20.0228983450628	-0.657800058922869	0.27532809061566	-2.3891498228603	0.0168874140724474	0.164263911875283	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.99906598866224	5.36709533016959
Merged-chr5-107754945-4	15.1370501310224	0	1.29808041065712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155529502-4	8.00430957418714	0	1.29919879707111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81173302-4	10.1212023232059	0	1.29368210515706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60537228-4	12.5809754701418	0	1.28952734022277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29453490-4	12.0826222573254	0	1.2886926564478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96026025-4	14.5061407717483	0	1.29628587916823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79936888-3	12.1910420833236	0.556030471534961	0.361061739036932	1.53998724156725	0.123563463386895	0.724224421784918	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57021484394131	5.13751415893475
Merged-chr10-61121932-3	6.98661205675486	0	1.29448443248746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40733453-3	11.8866008629059	-2.502152845306	0.538253871996104	-4.64864811102391	3.34117660794931e-06	0.000210745682068586	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77685387462701	2.06184626282042
Merged-chr2-27266033-2	5.65891521316827	0	1.29750931765439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88244637-2	5.38274668104891	0	1.3281772133845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-178506225-4	15.6230016527231	0	1.29568162930142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19526523-4	12.2264902512217	0	1.28519068987272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70214506-3	9.96571820789423	0	1.28858558090228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115745227-3	18.7134110811908	-0.825137730681818	0.7217888725224	-1.14318433283441	0.252962065728347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33448343638262	1.56586581096048
Merged-chr17-32576522-2	3.41391187979571	0	1.39062118987606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24387424-9	79.7407086232502	-2.29225087164637	0.308263135495165	-7.43602010004962	1.0376405599056e-13	1.01202477653121e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55688209358684	3.4931004368132
Merged-chr17-35809700-3	16.8992544174689	0	1.29162000898739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90461129-4	10.1049706668084	0	1.30006503462157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108629735-4	13.2005007118074	0	1.29154469124893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-9006331-4	14.1918964344142	0	1.27924889070876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83647802-4	12.4506048485407	0	1.28462539373153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-138389247-4	14.8404225611175	0	1.27796693555022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126625318-8	47.1810285878511	0.0556419857230892	0.270587532927373	0.205633959263096	0.837076848720065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43172066534736	5.53486711813175
Merged-chr17-17634262-8	57.5071463415928	1.18011343864953	0.225903290643196	5.2239763099045	1.75121194023109e-07	1.98229036685969e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6679480576559	5.8728314824298
Merged-chr4-66894793-3	9.26952255217808	-2.01721327237639	1.14040698485429	-1.76885383829364	0.0769182694108564	0.510647285677316	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06360538524082	0
Merged-chr18-32348549-4	9.88782932863212	0	1.29736641370685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80219397-8	50.0940514521136	-0.429827225326179	0.282073778732465	-1.5238113491359	0.12755584367475	0.740451644378625	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74959484765915	5.26691629331353
Merged-chr15-41861161-4	9.32169723874786	0	1.29900247194448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24643038-8	68.9732064272881	-0.474304943505811	0.224034420606279	-2.11710746153316	0.0342507285817744	0.282808707342006	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93890499160514	5.47340936243907
Merged-chr1-87652847-2	9.18596345712722	0	1.3083563986201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34550137-1	5.48147817066978	0.30421422122282	0.851973003302269	0.357070259320046	0.721039208446163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49845309310044	1.85139442775557
Merged-chr1-45865930-4	11.5164976559337	0	1.28719778262717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70872295-4	13.1488320722138	0	1.30063169852977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-23675657-4	20.0669653410489	0	1.28101056943791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40477093-4	15.0804790363399	0	1.28737143304494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45420443-1	3.05097492739582	-1.3617294235072	1.08779473723563	-1.2518257138913	0.210633378194681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99956639646821	1.58180101474665
Merged-chr6-113850032-2	4.90114149942998	0	1.31036898554948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-158061717-4	13.4302533719077	0	1.28341236940928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4336492-5	34.8240703584072	0	1.28179238143927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40630276-4	9.73880353118272	3.41078010739077	1.05691037931739	3.22712329648388	0.00125041566803527	0.022615461456804	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.38860239282551
Merged-chr19-11533596-4	12.2935535854735	2.0676236141818	0.740294012452825	2.79297627618399	0.00522255220118948	0.0674260739175249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.921214647921698	2.36809407398891
Merged-chr16-85148797-8	88.5662235426687	-0.969961942947069	0.216256281500976	-4.48524286191748	7.28309309397075e-06	0.000391209915390204	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45917241815935	5.36772368346671
Merged-chr12-17881855-10	104.281152389464	-0.6322048933825	0.207677034462457	-3.04417334838624	0.00233320655752396	0.0364925121368983	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40407049682754	5.78266474483475
Merged-chr15-81142350-4	12.0201888929956	0	1.29496849860505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155475177-4	9.73149317355571	0	1.28655087247031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16900970-4	10.1942485157407	0	1.288888756691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46745694-4	8.0588706371407	0	1.28953920245791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161734969-10	76.1361659685435	-1.03444093153613	0.209020061962932	-4.94900308526167	7.4594564735197e-07	6.34694847289868e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.75370171697199	5.6507537063558
Merged-chr16-55801817-4	11.9883941529066	0	1.29948128550336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44638845-4	17.1892141436239	0	1.29424480669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111425466-4	11.3011893832964	0	1.28274978818377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83322154-4	10.6046066717577	0	1.30421429269996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35258251-12	112.13631977253	0.708190598151304	0.188455617741864	3.75786408830404	0.000171369913287636	0.00484566782937856	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.8812372447629	7.61281341953223
Merged-chr11-68440239-4	10.0683276517273	0	1.2927105771301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48444090-3	7.58978891979827	0	1.297179139916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78427525-4	12.4122953467394	0	1.28835929287435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98776811-4	13.5192638204102	0	1.28081773350183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34501788-4	22.0680535896489	0	1.30127288151124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12543885-4	14.0921811985503	0	1.28501935719282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64422146-3	5.75713215781731	0	1.35081715716132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8747341-4	20.3872718633787	0	1.28549996299548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36716122-7	19.7909223712946	0	1.28712456780204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151842817-4	14.0150809747283	0	1.29300118651882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122398038-2	6.389224178557	0	1.30469014264197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67041105-2	4.69616517764063	0	1.39418471876915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82041907-6	19.8822696824828	0	1.29017801477122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131672560-4	14.4199885132917	0	1.29008232849764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35327058-4	11.5691894708177	0	1.28497963847338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61021991-4	13.6752138407803	0	1.28444575199511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7204275-4	10.9586341712727	0	1.30018297841322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143978641-4	8.68260694647454	0	1.33054415582075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-21517055-4	23.2993984421669	0	1.27994677801479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51089481-4	17.4110577807128	0	1.28798595568133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112433568-4	9.79364810727981	0	1.2880881199334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-98814070-3	10.0093612580182	0	1.30046781709678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115045982-1	1.65944087678724	0	1.55541656027254	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76363173-4	13.5016758252456	0	1.28457436213017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11047929-1	1.84587517330643	0	1.55857872639941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72736547-1	1.77216815100563	0	1.53472533635448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37236132-4	20.258936192451	0	1.28608955716508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62850550-1	5.43247730350945	0	1.34504364412149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70324582-2	2.45290767931954	0	1.41135423911003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126155268-4	9.40012282034301	0	1.29289962804492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45640412-1	3.14953773863646	4.59817589670475	1.44248261979249	3.18768200989917	0.00143418163905486	0.0250582976967057	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	3.00619542038056
Merged-chr16-30604676-4	10.0871131117362	0	1.30368575833458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50837803-1	2.56637127378865	0	1.4058902821494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126196558-1	3.0759340549965	0	1.36546003662184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129361370-1	2.69635869461247	0	1.47095078166214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70841996-4	9.66898364216509	0	1.29135444660647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107998062-4	11.5518115329202	0	1.28514222882406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70219211-1	2.83715783172175	0	1.47411510253181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58841403-2	3.12054554848607	0	1.38054406674301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91411870-4	19.8167480095155	-0.356669281770628	0.388681550996407	-0.917638825038868	0.358807984568515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55589396862531	5.03999185055606
Merged-chr7-52439431-1	4.49268635626136	2.55639339257295	1.14240037967905	2.23773857050989	0.0252381084275575	0.224199216055897	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73445913886362	3.95054544097938
Merged-chr17-31075239-19	152.425419250111	0.772609836811044	0.163004743259378	4.73979972215683	2.13929568675221e-06	0.000147260163561869	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71006687264305	7.49394321676538
Merged-chr16-57339626-4	8.03055985368326	0	1.31059028467712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35393630-8	42.180108917639	0.712689433227149	0.230677808028496	3.08954484750049	0.00200463439107282	0.0324887993350805	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6019495050879	6.32051966786551
Merged-chr6-89405171-4	10.4244578889922	0	1.28959580421277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21757789-8	43.1586041382887	0.881727242024773	0.260133032873538	3.38952432255468	0.000700139974828909	0.0143017651751078	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84127288809566	5.64855850907306
Merged-chr12-16875757-13	114.720918795808	0.108252032392725	0.216862731197678	0.499173056591496	0.61765747398221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.64723413573985	6.79483896811827
Merged-chr1-144242652-3	10.4334119534683	0	1.28948244866898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70468826-4	12.1093725866837	0	1.28275894868291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19214765-4	9.62092703902029	0	1.30680650618262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117295026-4	11.1393800703782	0	1.29505693164729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80160979-4	16.227107815376	0	1.28875479412264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5849258-4	15.8149310592792	0	1.27943114886582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122438150-4	10.9892500562247	0	1.28438568610559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191312785-11	104.959307008265	0.558075044586425	0.176297245645093	3.16553467721154	0.00154798209121493	0.026605585937015	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.62112969839801	7.14233806510694
Merged-chr4-141767073-8	49.6794271771357	-0.20228749382984	0.252262818021896	-0.801891834143714	0.422615530113565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03423171129246	5.79325924033532
Merged-chr11-120800242-4	11.1430811160223	0	1.28623148683181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80483745-4	12.2736488083868	0	1.28749708744158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191288949-4	14.3800856909281	1.83379008878106	0.570599244359978	3.21379691071613	0.00130992288464131	0.0234002790650003	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73390347826945	2.89406295304858
Merged-chr3-144137717-2	5.00294501067881	0	1.32885744998936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5815233-4	16.9058196019364	0	1.29406831907702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86746237-2	7.13338643285666	0	1.3195895889821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75903461-2	6.40117923735897	0	1.3045459669988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38967405-2	5.04931098494723	0	1.36187779286976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41196594-4	11.3070169643345	0	1.29245024279912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19321694-8	96.2230536949182	1.00371810453711	0.252749350393889	3.97119954204787	7.1511649595853e-05	0.00243512259223065	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81108660565585	5.8143635400141
Merged-chr8-105622602-4	11.217425631885	0	1.28643326580657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17408038-4	10.4732832063105	0	1.28892847424077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116666290-3	11.6411082976866	0	1.29249167393286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32292569-3	7.58642951993256	0	1.28713826050084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103376580-4	12.835497038277	0	1.30659018632507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-10251967-4	9.89573445044046	0	1.29725237018661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93456790-3	16.4619328712171	-1.74827709745093	0.373083976039614	-4.68601497177488	2.78575894147305e-06	0.000182585961674521	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37810319355525	3.67338850236547
Merged-chr4-35994181-4	11.8877059572938	0	1.29619760862594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96594104-4	10.7566291103879	0	1.28977031802779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181275507-4	9.08967736533209	0	1.29944027559862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85712797-4	14.3427596445369	0	1.28902804745379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70968339-4	10.3021522852417	0	1.29055733931475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80962409-4	11.4985560189722	-4.44940860778602	0.96890914172755	-4.59218353524129	4.38632349360354e-06	0.000261284134013689	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60681387323025	0.609949614787909
Merged-chr18-5142705-4	16.5022923458316	0	1.2842945308229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77954606-3	13.6499378616613	0	1.30230751334977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134461330-9	81.6222868722861	0.786968000532885	0.163013912209203	4.82761250170435	1.38179630806477e-06	0.00010490077090773	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47164004092165	7.25571480212029
Merged-chr6-97818295-6	27.4854354280733	-1.04451754064593	0.325282392659748	-3.2111099900157	0.00132223315572517	0.0235493725249434	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02007744592081	4.03736649338667
Merged-chr12-25378262-8	83.150813726515	-2.57796644418565	0.258864391330074	-9.95875265400456	2.30941927891667e-23	3.77278280500221e-19	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.3655408047565	4.8260953672972
Merged-chr1-39615001-4	11.359143760393	0	1.2929437717223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97062297-4	12.1862688246522	0.0545430803025496	0.654380138237071	0.0833507576337678	0.933572641913653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1657203645968	1.56706844884727
Merged-chr11-19920423-8	63.6684419724438	0.82571845567388	0.24436835097721	3.37899098787506	0.000727523930204713	0.0147779853102758	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71239654277382	5.55978792194774
Merged-chr6-108832418-4	10.6003045047001	0	1.29149784657235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77267223-3	11.5960783036966	0	1.30847594256026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132107190-4	13.176018633597	0	1.28400030798194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46546686-3	10.9751197015255	0	1.29754380350835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26503618-1	11.9934470988841	0	1.28707724962205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27399589-4	9.53146537734983	0	1.28360206611591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121594772-2	4.2543119312474	0	1.34502646243476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148202400-4	21.4844730795675	2.46121877500145	1.17270886483893	2.09874662739886	0.0358392419933062	0.292273894279403	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr9-113664607-4	13.101167890827	0	1.29950444638977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40834887-8	32.4723164624578	0.539771205268714	0.257591121131389	2.09545733912698	0.0361303569719214	0.29354398939291	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80327091903997	5.35912816371032
Merged-chr19-5723044-3	10.4763464075854	0	1.30530911521135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109548920-6	36.7989021957863	-1.69846426393312	0.503709842953392	-3.37191001465159	0.000746488338149135	0.0150931849488926	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18683775816552	2.86048388135544
Merged-chr1-183978792-4	14.4924393091338	0	1.29575947470586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-153877168-4	13.1906667656158	0	1.28577250808549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50519151-7	41.5477549620888	0	1.27539051860876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74880253-6	34.9918885932275	-2.55792888279493	0.636495643831165	-4.01876887546058	5.85030227312285e-05	0.00206757086176033	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08262322444834	1.31734301959449
Merged-chr17-27914970-2	8.19760164682612	-2.52793388382157	0.668228111026587	-3.78304031528687	0.000154924309293253	0.00447950615711368	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89860959091596	1.69735600200997
Merged-chr12-55648324-4	8.41671167764557	0	1.29122158103364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94574182-4	9.28575167816416	0	1.29826462783773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61257720-4	9.61989840143637	0	1.30523239706692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29468909-6	22.9611469872208	0	1.3009234543723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55714110-8	65.8817528771501	-0.494237693374473	0.263385512245012	-1.8764801798009	0.0605893738052586	0.426858894579609	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75643089607651	5.19901125499946
Merged-chr16-92443754-2	11.1884502829172	0	1.30389397787788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99691168-2	5.27306767060882	0	1.35716150650629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21710115-4	8.61502936764502	0	1.28769447603795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82664835-2	2.30899621180026	0	1.59445955447409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17827078-6	25.4693988576068	0	1.27635408881458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84751439-4	11.2125404586169	0	1.28629257068169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118804684-8	34.4201695032046	0.243025026252137	0.349144198646123	0.696059184699376	0.486391765860989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71132543271727	4.90126772848606
Merged-chr8-18564806-4	13.0223514568703	-0.016921292861234	0.565973685339024	-0.0298976671523128	0.976148666361997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62136182395691	2.82425274925535
Merged-chr4-59239454-4	14.2390919528397	0	1.29375689001595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123025290-4	8.3521741436025	0	1.2918901489304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62055179-3	8.5148839537569	0	1.33935265570388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136718974-8	36.4966921819782	-0.185981137935555	0.348599373272934	-0.533509673839665	0.593680816309811	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30750421014104	4.8131188606204
Merged-chr11-21564062-4	9.99023750069395	0	1.29538847394687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52862153-4	17.1871405132137	0	1.29823914814031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84843005-6	19.0840918751047	-2.22393232296848	0.496730224590416	-4.47714315109825	7.56485272711463e-06	0.000404859022363663	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47726998805631	2.18210741161866
Merged-chr12-46870254-4	17.4359604085764	0	1.2845113173023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149690143-4	20.9203492325521	0	1.34170937820412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97094437-4	11.9038297974355	1.03708390011603	0.643578032398238	1.61143458587521	0.107085034032107	0.653692029508091	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03344687553598	3.07370578505094
Merged-chr6-116131926-4	19.1800404308454	0	1.28607668845457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118468233-2	5.03185639166643	0	1.33290459135473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134606418-2	5.78279034606541	0	1.29995566111434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9878120-3	8.61813667022101	0	1.31633769764896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67823933-4	11.1137605503193	1.31772886750776	1.3015917418916	1.01239799323919	0.311347797476374	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-170325411-4	13.5005403522803	0	1.30523251937532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32724641-4	13.504959024599	0	1.28192767507806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36940394-4	13.0330803622125	0	1.33413594318344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52801839-8	65.4013220209287	-0.695694030221904	0.227783877381516	-3.0541846869025	0.00225673104906428	0.0355602476807703	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88873963211152	5.24258068540168
Merged-chr10-117906541-9	58.8244469826704	0.743440627662404	0.247687120714234	3.00153122826333	0.00268625485130538	0.0408128364365035	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70149690664842	5.60373479390072
Merged-chr13-46098805-4	14.4986684894233	-4.76343646932179	0.845963675310296	-5.63078133062225	1.79395056841227e-08	2.92337889883961e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3164167150401	0.733321818366247
Merged-chr17-73971546-4	18.664377659055	0	1.29003046873136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36804425-4	14.4019836221147	0	1.28920165906969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12302441-4	8.84651798780084	0	1.29018441285661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27763581-4	34.5812162105059	0	1.29245730434647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144700141-4	14.9406638367475	0	1.28121707753368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120481686-3	8.72557733379215	0	1.28772072510265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125791611-8	54.3594811463641	0.0489767946672761	0.240783782718422	0.203405703300835	0.838817942401327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19981208331636	5.2163122613714
Merged-chr15-9428046-4	19.2439407594329	0	1.28100943505151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56756607-3	9.06615899661548	0	1.29727372943617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40612272-4	16.8163169822382	-3.19157818927586	0.622312555458712	-5.12857753114641	2.91939664012534e-07	3.00900461901626e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3670693117315	1.64536602019594
Merged-chr9-110781431-9	65.9023759178478	-0.763215770025835	0.22217508360848	-3.43519965258924	0.000592117416446564	0.0125476013282264	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.43178123126788	5.47856179022243
Merged-chr10-14959284-4	14.9119260593331	0	1.28346797072451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30617087-4	10.004977489392	0	1.28886519351856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60767158-7	31.878829490571	0	1.27684445415771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111668672-6	26.6192649507554	0	1.28154023139533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33324775-4	12.5914617043372	0	1.29215120431443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123951869-4	15.679242328071	0	1.28614546331095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141560141-8	59.5037765378898	-0.00223572467373141	0.269068574851431	-0.00830912593551992	0.993370352989247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.4920170480423	6.44508782701543
Merged-chr4-101721913-4	16.4766878277638	0	1.30159807375426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160250465-4	12.1518598019503	0	1.28999941555843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9419409-4	9.74447535135753	0	1.29162502127545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47736179-8	55.0899488826079	0.601865063071746	0.235447675486072	2.55625825070993	0.0105804561703834	0.115907877436692	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00779426500932	5.67164034964849
Merged-chr2-166045182-8	51.9558924547037	0.0910916935906382	0.259162831086693	0.35148440541679	0.725224969789894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28507857982555	5.31946953339906
Merged-chr13-34278287-4	10.4239440812788	0	1.29979176041947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182960270-4	10.2674949843298	0	1.2911673264268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86161110-4	11.8398265201535	0	1.2981883916911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141994203-5	24.8672916207836	0	1.28559519341324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92430910-4	10.9018533581154	0	1.29239539892723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65953956-2	9.21135039989567	3.98843051077777	0.961010874151497	4.15024493276339	3.32119685953921e-05	0.00131611237103365	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	3.08674768604548
Merged-chr1-170371448-2	8.91791493253483	0	1.30396007466079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6713722-4	8.68276356388512	0	1.29871215030455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35827914-4	11.4109911515572	0	1.30206328190409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140173944-8	43.2639554001955	1.00107579655803	0.242970888560951	4.12014707805997	3.78630623533643e-05	0.00146111335604779	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31429176932535	6.32577041608145
Merged-chr1-91092671-4	10.8490980129648	0	1.29516931249649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130520404-4	11.2611183153689	0	1.2888038312236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48492112-6	35.4073298875643	-1.72095641598529	0.406901480872288	-4.22941792272669	2.34296738606918e-05	0.00100002316662362	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75140955329445	3.59296178371372
Merged-chr9-106310054-8	36.6062712867879	-0.182373344602697	0.245974827598197	-0.741430927641937	0.458432197931024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68354122248573	5.50775255377038
Merged-chr3-87326237-2	10.9674765675185	0.699149655865941	0.582676604253278	1.19989313242107	0.23018084749185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88482499125372	2.93739295304115
Merged-chr6-135008408-7	29.5756034614005	0.730771737186728	0.360107223316149	2.02931707522335	0.0424260052235842	0.329573197496473	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05907501295103	5.6915767658227
Merged-chr15-62321101-4	22.2353843868729	-5.68192547695065	0.974321546897552	-5.83167384016407	5.4874101348932e-09	1.08332417726505e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23087714407906	0.306240821987646
Merged-chr16-58512348-2	7.86590257088807	0	1.30631068321162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25543522-4	12.1844857601523	0	1.28366903214367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34867830-4	16.7520895484902	0	1.27964687202323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17983359-4	9.97393072301505	0	1.29189192732575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99358157-4	9.7944259281421	0	1.31597400718036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110627831-4	18.0310848764645	0	1.29168894207019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20864768-4	14.2153515292065	0	1.29647820252059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123363254-2	4.86773761042153	0	1.33309295526581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113422197-1	2.13524347051067	0	1.56118107408603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67302162-1	1.50372865775926	0	1.87905094351236	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101733435-2	6.39588362639721	-1.05657025242668	0.952396271286915	-1.10938092082091	0.267265889472956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56142358003246	0.994591904006138
Merged-chr1-173848059-1	1.53603629653802	0	1.78223607239412	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105273286-1	1.86419363366494	0	1.43763530454503	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-49051575-4	16.0424780893862	1.79876738072221	0.630761717523886	2.85173835181919	0.00434808744170245	0.0584029027678291	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35743635436852	3.01206875777999
Merged-chr11-85953168-2	3.27962409825932	0	1.40624367269085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90068085-4	23.5879320226022	0	1.28034369972134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43752243-4	10.4405337567419	0	1.28516789785363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32709607-4	10.3227577877995	0	1.30293706944579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124904286-4	13.4379221778334	0	1.28035813863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59294825-4	15.2133297981563	0	1.28628844381586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68799116-2	4.21222133143583	0	1.34072124349848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91456052-4	11.7182177537311	0	1.28414592173696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88102614-1	5.39520566879206	0	1.33725662390777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97412681-1	2.19261568451903	0	1.46454743803016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128535985-4	21.9930532432573	0	1.27903668119538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20801764-4	11.7544338867314	0	1.28839012875113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121743782-4	13.1676274292929	0	1.30198477456572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79389492-1	3.25492619842606	0	1.36858449434095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84146028-4	15.5902185814859	0	1.30136487036652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30635442-6	23.1170915437022	-1.23663047885293	0.496595321899065	-2.49021773729934	0.0127664856791414	0.133264979742679	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22212366463946	2.58111491336869
Merged-chr12-84614246-4	10.9943832080102	0	1.28790420007197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108726617-4	10.798827968522	0	1.28710759679539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51678478-4	9.75290256947494	0	1.28745892419361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27356326-4	12.396107674156	0	1.29328766270938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87716561-4	14.5052088109448	0	1.29175691199001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97479018-6	70.1461016167715	0.873051735424351	0.243508233197402	3.58530684552504	0.000336682113455049	0.00818155220004712	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11401288964101	5.95920811929856
Merged-chr18-60638407-4	19.4458715398119	0	1.28947614195361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59888218-8	35.0557629569168	0.0987366526897988	0.275504359842411	0.358385082349609	0.720055153831147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83993777725119	4.94017767551212
Merged-chr2-69856584-2	8.16426449536664	0	1.30151273256132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99632781-4	16.1727484103489	0	1.2821880712405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3929382-4	17.3635238829378	0	1.28345425513339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19980001-4	20.2733738852069	0	1.2915247541331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24797781-4	7.9515017612765	0	1.3561639437302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122258713-4	9.44569798279645	0	1.30135038587165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5888358-6	29.2261411109377	0	1.27740642455207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140721030-3	6.19224393993977	0	1.31715805850513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43089707-8	70.4801176277575	0.832999838937294	0.226863858864532	3.67180494551451	0.00024084347522937	0.00631426047249494	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.35207059036058	7.1844406346822
Merged-chrX-52560190-4	8.03804846598348	0	1.28710109267235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22752701-4	15.9148195141688	0	1.28066755101835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5445581-4	9.01208612878628	0	1.28974535382263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33921664-4	8.66314839217509	0	1.29465429920129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30811071-4	15.1759843442561	0	1.29473658499016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135537487-4	12.1469592125837	0	1.28237720437204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123962676-4	17.3579016463687	0	1.28420389859719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75434646-6	52.5268450808993	1.86568215786272	0.351307019128413	5.31068853247354	1.09211839730427e-07	1.33894125310028e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24142427082898	4.95174629304493
Merged-chr5-90271398-4	12.4671812553095	-5.83870874194236	1.0317561688538	-5.65900056447322	1.52257054668825e-08	2.55112551138181e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57667875929505	0
Merged-chr3-121370597-4	11.2084790458591	0	1.28447078582648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138083319-7	35.2159266203693	-0.984861229926327	0.360987680774153	-2.72824055329049	0.00636731562221732	0.078413694327859	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0898299872397	4.06398610100787
Merged-chr8-35698383-1	3.35676234252168	-4.73404650020532	1.17488474655061	-4.02937097796543	5.59263007897339e-05	0.0019905011173235	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53675723787118	0
Merged-chr16-91376876-1	3.65024117416764	0	1.34826795528568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103982442-4	11.2703703937714	0	1.29743786732748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119164338-3	8.68795261935086	0	1.34014085834394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17842268-4	14.49035324948	0	1.27829138695572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85985759-4	10.8437059133237	0	1.2866391351876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142023389-4	9.33490214603483	0	1.2863108809376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73606959-4	10.8480050265738	0	1.2939824655089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38143302-4	13.8813483693428	0	1.28983079911069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61533816-4	15.340946798717	0	1.2843478914453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40727709-2	4.79229395102055	0	1.32613501170363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-118128192-2	6.93638987142293	0	1.3133960895327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67442563-4	10.1768399688061	1.91565967286022	1.27246407049118	1.50547250589226	0.132202640323203	0.759598499477712	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr8-104116624-5	21.3929292875466	0	1.29529096331988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173018794-6	27.0791415217383	-1.07088242372511	0.384363486188272	-2.78611903108966	0.00533432798431853	0.0684423711885487	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49462474070743	2.88285023239858
Merged-chr15-97162463-4	10.5279224932436	0	1.29083484173748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160361679-4	16.5191287611372	0	1.29240098964095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59902458-6	25.8835279982971	0	1.28718678911389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24007602-8	73.8060315658121	0.449614957792126	0.27186948595115	1.65378970802524	0.0981702478435553	0.612063067988261	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99586580594148	5.28909467317833
Merged-chr13-37857979-5	40.4724214607915	0	1.27659352940164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103393783-4	16.7135324017537	0	1.29345166614999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34620463-8	60.3537807957119	-0.186967678327154	0.235817523373779	-0.792848960722922	0.427865826928938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.62107710923557	6.41127833839478
Merged-chr6-128764247-7	60.4740461512773	0.358142378059305	0.291788076256343	1.22740580305505	0.219670106391883	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88332552496638	5.18311336093896
Merged-chr13-58688439-2	8.19190134452658	1.76284881683257	1.12022966878061	1.57364946310648	0.115568511290936	0.690557785188141	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	1.04220233489076
Merged-chr13-26234925-4	9.2889505525081	0	1.29182952160595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123138315-4	13.7052025921345	0	1.30238382225697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77626659-4	11.2435604283511	0	1.32740054227474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59328006-4	8.87750730369009	0	1.29131807888671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5837716-4	14.3424857297837	0	1.27926865640657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101256168-6	24.7472703154539	2.8632750091282	0.434317082637027	6.59259127396823	4.32215291203251e-11	1.74342842092393e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79746943442234	5.21109535521538
Merged-chr13-114964440-4	8.24390928490084	0	1.29837527145115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6477290-3	13.5983567018128	0	1.33329093242585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45005326-2	2.31513916679306	0	1.44810610226948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60852085-4	14.5155321251448	0	1.29322511742067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75829174-4	15.7922285602928	0	1.29727743757225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109156055-2	3.26560706534121	0	1.3836703405763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16884134-4	11.5215878166101	0	1.2840308154299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111432304-4	16.3771677282171	0	1.3040472781632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108327797-8	33.8508250700551	-1.24291963119244	0.264650773807182	-4.69645190645843	2.64719527749773e-06	0.000175084638262517	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76210318487929	4.2026472811154
Merged-chr8-126828220-6	39.1297480121885	-1.30304192661943	0.415428265629901	-3.13662317763494	0.00170905628756095	0.0286947564663304	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48529715351026	2.66036991031164
Merged-chr5-135913416-4	8.95960213564159	0	1.29478241019133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69524219-1	6.41257853803657	-1.29221965443477	0.81915805434211	-1.57749734326007	0.11468113293016	0.686573826152472	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62711332672736	2.47092068604539
Merged-chr2-38481418-6	22.8927515527649	0	1.27798908051502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107417430-4	8.9171605655425	0	1.28484682164029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17581391-7	43.9356404545888	0.822389907004892	0.250369027785281	3.28471102947359	0.00102087015820218	0.019308185631803	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75714609626968	5.61226369262454
Merged-chr13-58478617-4	12.817743335889	0	1.30704190682809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16671238-4	10.9829432221756	0	1.30903503649194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86888693-8	48.6370602386107	0.812774101894493	0.252734430998414	3.21592154532991	0.00130026373519499	0.0232977883301486	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9753537286667	5.76169814024367
Merged-chr4-150594019-3	8.10201286758372	0	1.29967164863077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122264447-4	15.0336492056547	0	1.28687749219321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158179155-4	13.7566087394582	0	1.30054758578594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86151111-8	56.7720589030495	0.296129073013055	0.253520506276725	1.16806753568811	0.24277952415714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43424840934853	5.7242179423856
Merged-chr14-22813492-4	9.7419992386301	0	1.29216993823741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150013946-9	37.9824112044441	0.119625722887823	0.329085448819716	0.363509609181652	0.716224236073815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32698182169197	3.64130082813507
Merged-chr8-115420432-8	19.3937110068544	0	1.28408085868614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99571173-4	8.70290283821989	0	1.29206451912952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37854602-4	12.3487879761446	0	1.28821893739853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57433016-4	11.9824369754458	2.28657599263079	1.11814011015365	2.04498163679737	0.0408566685339009	0.321084769935813	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.03956264035389
Merged-chr3-121602210-4	16.6839205917341	0	1.29189371761808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78397105-4	11.2330340274417	0	1.29491455166009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15919632-1	5.0188872014186	-4.38188665833301	1.09230241745798	-4.01160574974336	6.03071520725394e-05	0.00212329265050224	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23651774014291	0.469435083901436
Merged-chr16-49165955-4	14.0263224417532	0	1.30315155720193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149357298-4	16.0732973594711	0	1.28492664595463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97082252-3	8.34081873221943	0	1.30134658532538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25436408-4	9.33017808968595	0	1.31058704287094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51927351-4	26.734759589442	0	1.29220419327474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80196324-8	69.7528737097576	0.732531578576787	0.227046582670012	3.22634928023315	0.00125380247715035	0.022651638560096	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21362449386691	5.94302697630748
Merged-chr6-38913101-4	18.6221469784809	0	1.30066678580937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50763323-4	8.76092252144842	0	1.3176884372481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28430701-4	15.2393043454439	0	1.28458628247369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80057668-3	8.25509683577429	0	1.3034308834289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14873939-4	12.9463729160371	0	1.29759129472608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49939129-4	22.7169145577081	0	1.31319911754857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82570200-4	12.2282906224164	0	1.28171313093025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105426164-4	8.63159363857496	0	1.29106315663359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-4922815-4	11.3885453804239	0	1.28713314269194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-139110238-2	5.78707842624059	0	1.30722498145926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95001857-4	10.0310726475611	0	1.28700243915513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-117770146-3	14.8378593305916	-2.74805579854504	0.556592976775709	-4.93728076567598	7.92193822661194e-07	6.68820381597137e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6391241354786	1.87822650685341
Merged-chr13-95038441-4	13.0419935378333	0	1.2994146550005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122870076-4	14.1576578430929	0	1.28515693030866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59042878-4	10.0110145432671	0	1.29367543010939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24441982-7	29.491503334662	-1.65134604686536	0.352839472299431	-4.68016244357144	2.86647704611258e-06	0.000185983748511546	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23254331288916	3.65809024895148
Merged-chr13-111805241-7	37.8112632001168	0	1.27559572898636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102424875-4	12.9292140580052	0	1.30664326685396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17770772-4	10.8284025753229	0	1.28943884131586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148986149-4	11.2212887162395	0	1.29639852145537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132035395-4	12.7450392522459	0.216212654705847	1.03326241635647	0.209252413794614	0.834251197673107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	0.581381506691384
Merged-chr13-55024431-4	12.1779182209049	0	1.29093523386996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45372719-1	5.64122953922181	-5.62072224960118	1.08307012591944	-5.18961987325581	2.10723812069136e-07	2.28357516143777e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25680943545996	0
Merged-chr17-57344165-4	8.74292459403982	0	1.29027508376667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31232984-4	14.7351303361291	0	1.30129605113943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3706401-2	5.36345555229482	0	1.33287951198665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23702889-2	10.8720791214393	1.39667918104632	0.47945935841165	2.91302934553876	0.00357940962143347	0.0504706564672278	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85545841394229	4.26050659930734
Merged-chr6-30229144-2	6.21737676939109	0	1.33145438183146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108528183-4	15.2606136318578	0	1.29473101894909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98833176-4	10.9121551170698	0	1.28600687713454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-51030367-4	9.59196445462573	0	1.29258262786264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129175841-4	12.6892519805246	0	1.29248477253005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71087119-3	10.441317650546	-0.392532476322274	0.566685997177627	-0.69268074079345	0.488509928004202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00603737851087	2.17543988140679
Merged-chr17-50666497-4	38.9306378999131	-0.934260929404821	0.406631491638625	-2.29756167098613	0.0215867492659975	0.198901257407765	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86640445592867	4.8734437918504
Merged-chr5-54019714-4	12.388163436616	0	1.28905435107615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144980939-2	10.1632574252292	0	1.3058215935897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60070890-2	7.35199723699145	0	1.30316521380658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99130799-4	19.7062417719577	0	1.2921205382708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180922511-4	11.1229338767894	0	1.2861090289207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139236244-8	77.2220560989316	-1.88589861095535	0.252690936718606	-7.46326178313022	8.44064108672204e-14	8.61815831957716e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.82799482267151	4.84009954100174
Merged-chr8-46844802-4	10.2312654606327	0	1.28390999115547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136716278-7	29.8700356543857	-0.590457697861715	0.412060972113859	-1.43293769082931	0.151875644781847	0.836660418471973	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78432766882475	3.83380858812872
Merged-chr3-69674377-8	41.7742479291671	-0.0633269340397333	0.25133677200062	-0.251960481292317	0.801071609864101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4848172719369	5.3367375353198
Merged-chr10-44553847-4	12.1242674731967	0	1.29244970062536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25022270-3	11.5667108046909	0	1.28948675353699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64317680-2	4.78701720269957	0	1.31458745945061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28525926-2	3.70980519509305	0	1.38959868008152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115375663-7	26.8171991030976	0	1.27730310969776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30198486-1	2.27952936115216	0	1.5184444811801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111422806-4	11.341642367263	0	1.29259221572629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55002599-1	4.40592605950253	0.0390690481649721	0.948625415000928	0.0411849055983113	0.967148487050682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36834301422237	2.56155645697149
Merged-chr2-11464944-1	2.19019363843504	0	1.5237018856804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22824014-1	2.29958005283	0	1.41290617646672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120318466-2	5.67434238908515	0	1.32643725213427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29434180-2	2.79189895217898	0	1.37285798605589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136016447-2	3.34441299325275	1.96141811449207	1.46314560854313	1.34054881690489	0.180066984605731	0.944506114628843	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr6-54048956-4	11.2156351572445	0	1.29381857800801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156680439-2	6.66515032502655	-2.34717077800253	0.835623501649313	-2.8088855487786	0.00497133164900724	0.0648636154684619	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37209231191473	1.34557707159302
Merged-chr14-120757079-1	2.38653138479239	0	1.43992835113304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85398945-3	24.5588019578688	-3.38510093774959	0.522895944863545	-6.47375633909911	9.55960168263406e-11	3.37665800839679e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86349236061684	2.2547128493771
Merged-chr4-95230735-8	51.2201380616377	0.876318770008488	0.306557287218334	2.85858078260055	0.00425540742804382	0.0574770264144174	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25469458668822	5.3748299021085
Merged-chr12-100170479-4	8.46757303186417	0	1.29068950743002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17335040-7	57.7693337882473	-0.890786118203803	0.305724889644704	-2.91368530458551	0.00357189777207603	0.0504153424330494	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.90833512435397	4.91615846087122
Merged-chr2-71843502-8	51.5890580689595	0.416616335927604	0.26483134490067	1.57313831594921	0.115686794523619	0.690948658709481	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93829122677006	5.24910612979959
Merged-chr16-55863566-4	10.1492393818852	0	1.28356969623857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80272084-4	14.6237635101726	0	1.2929216892566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105866881-3	18.8341621032398	0	1.30143106731831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88022992-4	9.62004602167218	0	1.28370110421435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136311141-4	19.9359975605512	-3.82628826326746	0.708067925672723	-5.40384350785579	6.52278579949877e-08	8.62829880271349e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50364544154747	1.72583980988184
Merged-chr1-36073804-3	7.5799286302512	0	1.31339354446258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140888927-3	7.75503124686953	0	1.29529071933566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121995011-9	99.683139990502	0.798236153270328	0.188309545296408	4.23895746768368	2.24560194174019e-05	0.000963500357747568	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80288234625737	6.65134646193976
Merged-chr13-5778372-4	17.1193543639054	0	1.28173949231389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11430972-4	14.2862422616195	0	1.29026418966531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87547037-5	16.8813332648101	0	1.28056253993286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-98016995-4	18.7410820404488	0	1.28128326025578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32565074-1	4.47810996655737	-2.19714068529993	0.784793976146481	-2.79964009928873	0.00511596108578168	0.0663455565172841	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0420086643723	2.18988090107364
Merged-chr6-71446395-7	40.0758062380691	0	1.28245881931093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11540337-4	9.44897115588071	0	1.29876073350365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96593276-4	11.4339515079319	0	1.30621097687192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164492966-8	42.3572928436893	-0.705580865656878	0.23275898211553	-3.03137975275499	0.00243438862661247	0.0377497767429091	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91271023454634	5.15759179513099
Merged-chr17-28432223-4	9.49493917153712	0	1.30082182256737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17726542-4	8.85011575401839	0	1.29506794872337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68519977-3	8.00193480601291	0	1.31795840175137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149083672-3	11.6502330862086	0	1.29275620041856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33289582-4	18.5708862100336	0	1.27985578858469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37370557-4	9.63609539385328	0	1.29420292284748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128381426-4	12.6602860683289	0	1.32433861592025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99215420-4	13.1035833387493	0	1.29900101081884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-46107537-4	10.7647351941419	0	1.29309623636255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64747703-4	14.0440263280296	0	1.29011552686358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123755478-4	18.9716161831945	4.19741912537419	0.962667526157914	4.36019602959543	1.29945979422232e-05	0.000622540320478383	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.45023979605624
Merged-chr7-100856437-4	8.56253568615159	0	1.29956404201871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149763530-7	35.9345897252587	0.0752531426329849	0.273562551818877	0.275085687469421	0.783250407299799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24596152801179	5.18998655276403
Merged-chr17-33564786-8	34.4908033830491	-0.471198864408112	0.332715123134144	-1.41622316403734	0.156710175874221	0.855361105302106	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38194214452039	4.78316274776008
Merged-chr5-118413577-4	10.747474626349	2.79259980792512	1.13399351252048	2.4626241482794	0.0137924414024415	0.141041006056752	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.00443616959195
Merged-chr1-154006254-4	12.4951859041172	0	1.28532902929878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111470581-4	10.0038804034136	0	1.28964219553248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109469673-1	5.20176741955214	0.784342040215202	0.858178873958061	0.913961021433316	0.360737327576168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38640097695213	1.57074540165941
Merged-chr17-7897957-4	11.2154593742044	0	1.28486732780909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16932345-4	16.2008093056547	0	1.29246873982866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142698324-4	9.86351225447321	0	1.28472804208192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73589306-2	6.23849802819815	0	1.3349261864631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70805095-8	47.7462961693181	-0.713490837832224	0.298662241364986	-2.38895561277292	0.0168963435930386	0.164326308740988	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31092461700294	4.62666894387138
Merged-chr5-121586623-4	14.6216643498271	0	1.28181142431751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34235141-8	50.2904286248856	0.321045768451221	0.229767083833272	1.3972661492461	0.162333551210847	0.876464367299349	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40912642490383	5.73850724049474
Merged-chr12-86906543-4	9.0154214276137	0	1.29384730794373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162574769-4	12.2254905045461	3.41216014932688	1.00843134615134	3.3836315802254	0.000715339215075271	0.0145621670867005	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.64143129445672
Merged-chr9-45272368-4	16.6584854093552	0	1.29052408490746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12833832-8	61.0657151967297	-0.0673323552399498	0.228623171360578	-0.294512384021456	0.768366401745184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94466533458794	5.85508425198305
Merged-chr4-123928117-8	68.638238777049	0.544614408161449	0.271536177872211	2.00567899433921	0.0448905077535437	0.343129619799165	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57042367587264	5.12496222044383
Merged-chr13-40844294-4	8.79895326195594	0	1.29655515856302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149955687-4	10.7051612498713	0	1.29144220746407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89267296-4	23.9861346653326	0	1.28382466625465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58382134-4	15.7247459202301	0	1.30252987383375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64627521-5	15.8267801714374	-2.53700251280072	0.664964854252747	-3.81524301107864	0.000136048979747216	0.00405023081118978	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60081990147708	2.15292080626044
Merged-chr1-58734712-2	3.71925926076366	0	1.35701484470712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22658718-4	9.1799764212239	0	1.29069249933755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12648355-4	13.8612308117103	0	1.29203464761096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117418625-2	5.61130579397841	0	1.29689003151747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131108775-2	5.78922139580505	-0.131584294354042	0.763214618840999	-0.17240798473418	0.863116795264091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59197883345128	1.69453213775868
Merged-chr5-88688138-2	3.57118426949126	0	1.41170135359138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140842155-6	39.345794042515	1.33969963373398	0.300979600896306	4.45113100603631	8.54192087321516e-06	0.000446901810553337	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17046849657862	6.45428564205003
Merged-chr15-36334596-3	10.5745801999472	0	1.3078911655056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90701568-2	2.8015013646705	0	1.526460404243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38397038-4	12.0408108225329	0	1.31603830111326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27937150-2	9.35140020185739	0	1.31551278309534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122662742-4	11.1089511251867	0	1.28761248536051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56727353-4	10.7701222861059	0	1.28816045298636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-42142862-4	9.00229521586505	0	1.286862500638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99100925-4	9.33977327342991	0	1.29624085995765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64278946-4	12.5791968303706	0	1.28461767360487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87664038-8	53.671233074028	0.512014357332579	0.240272902757954	2.13097004054748	0.0330916104221333	0.276063369672504	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78459864460223	6.25327941185107
Merged-chr12-31060399-2	6.6092206158319	-1.03361952241273	0.975766284381683	-1.05929005639676	0.289467702080332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61173624285547	0.581381506691384
Merged-chr5-64391608-8	64.8258361037003	0.0378122868694974	0.226421090274496	0.166999844509434	0.867370171270293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.54948527163063	6.53406589917417
Merged-chr8-40961924-8	40.3010841442125	0.879717098890186	0.256091317999517	3.43516955499384	0.000592183186365657	0.0125476013282264	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37518599116268	6.29455633078661
Merged-chr14-45038192-4	13.2282400746592	0	1.30197756568617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43481406-2	7.1238693227431	0	1.34332436195794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57472400-2	7.12253699070372	0	1.29785226843986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94464965-4	9.63158346060886	0	1.28665546093498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70475389-4	17.304592999257	0	1.28607703697303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83536661-4	15.6774177432813	0	1.29056045415813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-24298434-4	17.5735574086829	0	1.2936214248757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149355334-3	7.79322852941266	0	1.30499631554702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60705331-4	12.7178881439347	0	1.28114042360289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63498698-4	12.5706189267764	0	1.29782805997069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35459993-4	15.2476428959638	-3.13501701551685	0.747895659732326	-4.1917839403412	2.76769515221026e-05	0.00113747048689517	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58729921786636	1.47190689055611
Merged-chr10-88574204-6	20.0607014347597	0	1.28385842697806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95848087-5	30.6222704011776	-0.842353722532058	0.448337409617176	-1.8788388041304	0.0602665068078383	0.425013506784481	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29012354916517	3.348255802097
Merged-chr1-36927781-4	9.99406655697348	0	1.28887090462579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93251962-8	43.73226416538	0.00501360146401895	0.232044057364331	0.02160624805895	0.982762049465933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37460358428789	5.38786137540701
Merged-chr19-34520370-4	16.3262666014622	0	1.28269508057542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152774770-2	6.39759218338979	0	1.30684605323505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128913819-4	15.2070201382075	0	1.29457365321875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52763268-4	14.1235691904179	0	1.28258069743505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132945554-11	56.1380007979547	0.806621305656427	0.288147573151924	2.79933402469137	0.00512081348673011	0.0663937853380687	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14822045523186	6.1238296285494
Merged-chr1-127278545-3	8.53204247027572	0	1.29157592139557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60757460-4	9.83419166587558	0	1.30860345998308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20433379-3	13.4105981140809	-4.55964401332416	0.85995309493631	-5.30220082952531	1.14414871836833e-07	1.39434846670961e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21090581271424	0.733321818366247
Merged-chr16-91793763-4	13.6076882415621	0	1.28240605439404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61202038-4	22.2805087111318	0	1.2972823737936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84924305-4	16.9430875643246	0	1.28395820873151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90251252-4	17.0592175619431	0	1.290968165018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99331707-2	10.0519589621303	0.904217961757433	0.654366648425651	1.38182158875747	0.167026488556502	0.894299238574151	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01449608303713	2.30406722002565
Merged-chr11-32647426-6	27.8616838652564	-0.631161109510917	0.313906942175872	-2.01066311288298	0.0443610527717554	0.340690271878711	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83990540141912	4.21388118325651
Merged-chr17-88337912-9	62.4420181469596	-0.617407131731191	0.208118937583661	-2.96660716655351	0.00301105404898479	0.0444857196212888	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.08076908416885	5.48782432786941
Merged-chr6-125367792-8	90.068678392043	-0.914286855255885	0.237879584951583	-3.84348600339947	0.000121298920370319	0.00369356908225484	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.99120285071293	5.08905996088655
Merged-chr2-18975458-3	6.70929737323148	0	1.35381159136567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4299772-4	9.96205755997332	0	1.2869469859441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161998942-4	17.0505291034561	1.12982387453617	0.645459200531434	1.7504187307361	0.080046086265911	0.525285918929353	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29631641807373	1.67800608098903
Merged-chr2-163575544-4	15.7139483968333	0	1.2792004753609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38338153-4	15.9577765451257	0	1.28669513431823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83832334-4	18.3557513677623	0	1.29092092947836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12083459-4	11.7283560688113	0	1.28659778440564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44773827-4	11.6147033490421	0	1.28682581373084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17583651-7	35.8843089514459	-1.93724122706229	0.351373943892466	-5.51333205189274	3.52103026674407e-08	5.15886196884884e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6787894525242	3.47124214672555
Merged-chr8-105384419-4	10.3432101948729	0	1.29514576574254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37833698-4	12.9889474043505	0	1.29598712006191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121877462-4	18.5443526065144	1.01551004828116	0.809363714691118	1.2547017241423	0.209587059630954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02341579043436	1.9094343094868
Merged-chr16-94625922-2	8.67188972242701	0	1.30225018125033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66093667-3	10.958999725467	0	1.2891153232492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95823988-1	7.82010466577235	0	1.30000758758542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63104169-5	34.5977913899298	0	1.27608748854451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148542401-4	18.6792366660411	0	1.28750427714201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15657471-3	23.3019720376833	0	1.28297973364716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59363265-8	46.388704810931	-0.550444784890945	0.246180844695886	-2.23593669755633	0.0253559180345252	0.22490279409295	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38340371465808	4.65090190495258
Merged-chr9-20892204-4	25.0042849830486	0	1.2858106474358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40404245-1	2.62456557446198	-1.06597217223062	1.04852853949188	-1.01663629751765	0.30932648022195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58933512256233	1.40684701627341
Merged-chr5-54060213-2	4.81182495826799	0	1.30811532061017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90874564-1	1.77954651194052	0	1.58446027099908	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12090376-3	8.99077923346775	0	1.3105265087117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140464215-2	2.7892894663032	0	1.50228563473348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65900881-1	4.56454397603298	0	1.35807136483961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63930293-4	10.8849004830327	0	1.29655806673423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34792154-3	7.68337366869401	0	1.29562213856959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138118944-8	55.4071643173907	-1.53574926212257	0.306306378154551	-5.01376847382422	5.33742059926014e-07	4.87802918152801e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.1569347860708	5.62219580808098
Merged-chr11-48853837-7	29.5897628330361	0	1.27527893155663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18989052-4	15.1941861071826	0	1.29632021248305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39785547-7	19.842513427862	0	1.28252030045832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32199617-4	11.3250481512541	0	1.28644778513538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26550014-4	16.3395609608842	0	1.29108397553593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38473465-4	23.5102815697387	0	1.28210790421301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26513312-6	30.789268624082	-0.968970736330908	0.33645551827353	-2.87993712007766	0.00397754491454032	0.0548231702142062	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13614967618293	4.30413093287805
Merged-chr5-102056141-3	11.9677718002756	0	1.28458298306756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84328662-3	12.3344442505568	0	1.33529387374142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20232212-4	12.8247639113954	0	1.28908237255656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139761428-5	25.9387759005135	-1.25592666854264	0.480104776013469	-2.61594287599299	0.00889814427498728	0.101352298377779	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18572276135682	2.85322399374351
Merged-chr6-24159983-2	3.54649081938237	0	1.36035492555635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117210544-4	11.1325536729858	0	1.30064080035068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171471084-3	20.0350441081007	-2.53604984710617	0.543490840955727	-4.66622370792217	3.06785687783931e-06	0.00019673422525936	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01673441086545	1.75520908275751
Merged-chr5-115072302-3	8.48384186840187	0	1.31373912015969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99187009-4	17.5850344336939	0	1.32018936423953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96712220-3	10.3479835467568	0	1.31398112235442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16404573-4	12.5740662756445	0	1.29899313432304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19972651-4	11.9668065667802	0	1.28997785046847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38569473-4	26.1507207757912	-3.22287434346827	0.427543669464913	-7.53811732846337	4.76804787643941e-14	5.56380100953232e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56662393160854	3.2748292160886
Merged-chr1-172566478-6	58.2407825978031	-2.26254987778285	0.522043626763957	-4.334024517851	1.46407858456847e-05	0.000687296545885136	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62166374944711	2.20491078807447
Merged-chr13-40971421-4	19.5066931706262	0	1.28972495114693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30088649-3	15.6432323414493	0	1.28400160942738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134595232-4	19.1965700424103	0	1.28787458727973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86949333-4	15.1359871605374	0	1.28952731350964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60269007-4	19.255005056453	0	1.27781918016542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12761320-4	9.51632520146729	0	1.29609983529293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140992483-4	10.6495054444953	0	1.29625020451002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184853456-4	11.2769118558194	0	1.29031566744617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122378017-8	61.6174049346861	-0.952484456052836	0.260246175238492	-3.65993642434888	0.000252277832350198	0.00652626572951546	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.33164846458827	5.34214460746588
Merged-chr2-155367823-7	47.6521755805424	0.0997114672859084	0.27255322040507	0.36584219088557	0.714482835222349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05449880367712	5.14213354032513
Merged-chr11-8847827-4	15.1136732088049	-1.23192350960788	1.18743655189585	-1.03746470296961	0.299519337444294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.670820021473405	0
Merged-chr13-110541727-10	72.9666437028605	-1.38308184899956	0.285585699915601	-4.84296604979977	1.27915151507637e-06	9.85700883304018e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96083640188031	4.51983455130222
Merged-chr2-79056289-4	16.0552936665405	0	1.28503895661251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31785225-4	10.4750929514367	0	1.28550398041005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121423913-3	10.3201592964041	1.49758446616694	0.854146004768001	1.75331203073848	0.0795484615492571	0.523007723955907	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18369052569274	2.08307023099066
Merged-chr1-39916340-4	18.4252303103671	0	1.29156793813045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29111526-4	21.1213930669006	1.00236743899458	0.374533445754169	2.67630955354652	0.00744378575882941	0.0880241809982748	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6395546480928	5.70486624808483
Merged-chr5-81037319-4	12.6274474609911	1.31631967404442	1.28379326871816	1.02533617064275	0.305204594417172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr12-40277789-4	10.4561331620866	0	1.28506314206804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111930546-2	7.05729467321763	0	1.31305172951509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103551434-2	3.89647107200543	0	1.40795850966518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127258878-2	6.22007571915661	0	1.29599844348077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102033493-8	36.3089529502583	-0.370824383769977	0.303687421797767	-1.22107258040117	0.222058540332655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02594207998826	4.66389805611602
Merged-chr8-88279756-5	25.509297972986	-1.51249484866403	0.410136983270482	-3.68777971838388	0.000226219354825826	0.00599210780723486	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57030711404275	3.09247499969
Merged-chr11-115413432-8	36.8139460971952	0.319047789443512	0.273922370570807	1.16473798316899	0.244125069017402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7604393432953	5.12818621298791
Merged-chr14-121938816-8	64.2899699492615	1.77255501352846	0.306795304784744	5.77764713437231	7.57524694547472e-09	1.40628433778123e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79819281523526	6.44859436320303
Merged-chr14-75832202-4	10.3593286516206	0	1.2880844052483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117282309-4	14.8250258271211	0	1.28298562136431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88435879-4	13.7580266822722	0	1.28432522517016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106562961-4	10.4420110773004	0	1.29353276235397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115332566-3	10.7212284684268	0	1.31847106046075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102695535-4	11.4952913399632	0	1.28424574317538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4908909-4	14.228972843232	0	1.28992941088233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144004923-4	11.3683491871702	0	1.28715129504581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60469535-4	18.7495164395698	0	1.28728274543441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53394883-4	12.3074691596588	0	1.28764033165864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146154013-4	22.8578334251687	0	1.31292464496406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72752211-4	12.3888625913903	0	1.30740777882447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45677448-8	56.723497966488	0.266386473217397	0.216048926496723	1.23299142253057	0.217578964356021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39772746775005	6.65783972394863
Merged-chr4-139242622-8	54.9291663056491	-0.220664945706632	0.226189593199528	-0.975575147314482	0.329275045346724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39706272813416	6.1710527517901
Merged-chr1-36133275-4	7.9228267219424	0	1.31472040743322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41555404-8	61.8895280987944	-0.181154922472132	0.264890019706736	-0.683887307920061	0.494046329173359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05048143056059	4.95163444056772
Merged-chr15-38653201-4	15.9343332542665	0	1.28281429818809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55227277-4	11.4070577359644	0	1.30006615818711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126147389-4	11.3485271935344	0	1.28732513938781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105767851-4	13.3444985394895	0	1.28537739743336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15774103-3	9.7846661016818	0	1.30637565103328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93138920-3	18.8765884702759	-3.55195124017682	0.659978889507711	-5.38191644709467	7.36969730415168e-08	9.55516349279952e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06933679860147	1.60230598860646
Merged-chr2-4457909-3	8.24779870442159	0	1.31145717646215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84550005-4	13.2951113799327	0	1.28374661932209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134764027-4	11.1792040540578	0	1.29341833471102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41469716-4	13.934951041151	0	1.28539826284894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135536535-4	13.1710553039853	0	1.30521640001082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79618118-4	7.42836054434808	0	1.29968432050434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75884250-4	8.6161271572939	0	1.29094936570835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4256607-4	13.9402188938507	0	1.28057096894794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51398901-4	19.496264636911	0	1.28425260672584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86272945-4	9.3546125699664	0	1.30796601202632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27187055-5	27.8492174177515	0	1.27399372362684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44869607-2	5.02959971534971	0	1.37027849338583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91861518-4	12.5311707001164	0	1.31782341556224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108613316-4	10.2749272142739	0	1.29281137122912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191835021-8	33.8445855304122	-0.768872447210879	0.326942373803896	-2.35170632140837	0.0186875226495039	0.177855353197565	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32785380619501	4.59617779485076
Merged-chr16-32171511-2	8.73091957349906	0	1.29601537871867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103555234-4	9.35930324633467	0	1.29038440712499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191756735-4	13.5137351385783	0	1.28876554367906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43262912-5	28.3875013927758	0.900502489184739	0.428595224334441	2.10105581690303	0.0356360667830566	0.291011549613299	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51326486336938	3.62734044367009
Merged-chr10-8778088-8	63.1227476168867	-0.275758423830804	0.280446093367965	-0.983284953336789	0.325467213481964	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54618715561644	5.197919304367
Merged-chr1-80659649-4	9.69240523063098	0	1.2846095048892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120519562-8	57.0838814126419	-1.43649862960741	0.335393484307866	-4.28302485533325	1.84369566764147e-05	0.00082473441232289	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76923925902566	4.3349558834728
Merged-chr19-12010503-4	10.328705039481	0	1.28841281430708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4616870-8	50.6893935708537	0.09255151338261	0.256776131817954	0.360436590143144	0.718520667861323	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28824617939209	5.45935866128588
Merged-chr16-76224173-6	24.660794877224	0	1.28840340134365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126643408-2	4.75582966798965	0	1.34062078538803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148530688-8	78.0844519513805	-0.5774676928727	0.279402665529478	-2.06679378587308	0.03875358928374	0.308790640816397	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65078963807682	5.04514471517363
Merged-chr5-93032880-6	45.7928764832487	-1.91280282024226	0.244485430521027	-7.82379062901973	5.12560286216591e-15	7.44305876957986e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.8469059585037	4.96794312556301
Merged-chr2-102700913-4	13.1392063713606	0	1.28305711495421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100138702-4	10.4178411113217	0	1.29400923211705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120449788-4	10.1183879020645	0	1.30577399907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106149703-4	16.1090048880152	0	1.3016219520518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132753113-4	11.1276698418174	0	1.29312699349546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103207668-8	40.5468187260993	0.403432752792311	0.27361499340048	1.47445411444183	0.140359363528446	0.790887554464936	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99959093940244	5.41973585875112
Merged-chr16-87737422-3	5.63952150298524	0	1.31061870032528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104124756-4	19.9227276761023	-2.85241397940815	0.50119400780166	-5.69123719559103	1.26122159746208e-08	2.16883648704624e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28768755054181	1.66069583796294
Merged-chr1-183266297-4	13.4766573626589	0	1.28607242333459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133335365-4	14.3015340629416	0	1.30518194802279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117033970-6	27.8017441299729	0	1.27981614454929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111004340-4	10.9553786302987	0	1.28428044249619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17732179-3	7.41487907815202	0	1.29724511881013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86817773-4	10.9334339664519	0	1.29042277501633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145741815-4	7.55410645065324	0	1.30108173688881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12919426-4	20.3026959275084	0	1.2855545823286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26586517-12	69.7413521836438	0.954195545070321	0.214754164926426	4.44319925249051	8.86310151844522e-06	0.000458928868323551	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21851586269071	6.13021344187355
Merged-chr10-105273293-7	45.4203914068233	1.54523781724087	0.383319781118622	4.03119769277619	5.54933411205432e-05	0.00197832398737753	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2368477929561	6.45097325178851
Merged-chr13-109288341-2	7.7062345424005	0	1.33000768780326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105259949-2	5.99603190895636	0	1.29773031401466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-98979930-4	7.53323832044226	0	1.30104990456629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111937318-4	12.0958356597927	0	1.29706422716008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104937947-4	20.1464791435432	0	1.29386720259255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76540376-4	10.163191445919	0	1.30065329387876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108197302-4	23.3144401017671	0	1.28505702391576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152805074-4	12.5583209412545	0	1.28889402318594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94341005-4	10.8332523213571	0	1.28595618659974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44382262-3	14.4406196568464	0	1.29002862901751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56222221-4	10.6987523066897	0	1.30062459871427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54578327-4	13.6866099582878	0	1.28451535675019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120870269-4	9.58035156756757	0	1.29308812452594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65503020-9	58.5549031374912	0.37834447772185	0.197538200837797	1.91529778097208	0.055454538437441	0.400058762280086	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24716701618825	6.63459368160449
Merged-chr2-45047546-4	8.67589627291902	0	1.31136855619736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93167213-4	8.88150018782225	0	1.30637356976762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92528744-4	9.21418333899728	1.95217171944163	1.25277436569505	1.55827878738447	0.119167175208547	0.706825654096187	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr8-36347135-8	34.7216708180093	-0.0199736896156204	0.239207531839713	-0.0834994176897584	0.933454440393027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46707482190096	5.49232158620335
Merged-chr4-144986628-1	1.66270761360945	0	1.44909863179084	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31392408-4	12.6900587268983	0	1.30385962088549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94648133-4	17.4674765243231	0	1.2871150350033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3080812-3	7.79947459477753	0	1.301984897887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127213028-2	3.31703642701078	0	1.36050287369318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49905683-3	10.0907380541417	0	1.29262172655896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4648208-2	3.67052332441584	0	1.33784324700992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73617285-4	11.9439489292177	0	1.2876450804872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5722469-2	3.01364571861681	0	1.4186486517605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45616747-2	5.16177552170748	-2.10914267620977	1.09638274064372	-1.9237284554219	0.0543886293195632	0.393803808478246	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92504860886817	0.733321818366247
Merged-chr4-102607767-1	4.52555639629207	-2.01539765773021	1.01388560028553	-1.98779591816141	0.0468342653676874	0.353684491473119	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59411333500358	0.581381506691384
Merged-chr19-43771652-4	12.0400054809216	0	1.28355867938162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64205875-4	15.2033506117419	0	1.28661649521789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49733619-1	1.60206115499347	0	1.4838859393314	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106942028-2	2.63689444889527	0	1.37219891576795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183344963-2	12.5177236456205	0	1.28905918272454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103347189-3	12.5546431293293	0	1.31097260316527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102722728-4	13.3722642781042	-5.21347933205505	1.03825525627888	-5.02138496340507	5.13002247555709e-07	4.72815865568059e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72326849535826	0.420961122473315
Merged-chr4-9074593-4	19.4760320332289	0	1.2906861061044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17611739-9	47.0004673514028	0.192153698495267	0.320703923593829	0.599162293812872	0.549064664385977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92787051861907	4.0616972814267
Merged-chr12-73682908-4	11.1567187960407	0	1.292662429272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77825853-8	78.3585382699443	-1.85311453965987	0.212375748843054	-8.72564099128536	2.64677113808033e-18	1.08097441743123e-14	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.41219689225402	5.55367855005904
Merged-chr19-11431361-4	11.4426602084518	0	1.30001082003716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53324460-4	11.2059242436312	0	1.28535225371302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23816321-4	11.7349863371542	0	1.28428183732967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53187376-4	13.1409984318965	2.46119865434876	1.16557294769662	2.11157839516826	0.0347226272647806	0.285335110820467	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr9-100866217-8	40.4257257940662	0.602041097287597	0.284948458244533	2.11280700024334	0.0346172902801595	0.284827682025598	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55671531796698	5.26410747134546
Merged-chr4-132040300-7	33.3819470690936	0	1.27538614510386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27970475-3	11.3494394009875	0	1.36082919674082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43703273-7	23.4295588270313	0	1.28801062353631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34789200-8	46.5290478431682	-0.880932825464059	0.261742739800016	-3.36564378495134	0.00076365255510278	0.0153732716776791	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66688399744711	4.6412950812187
Merged-chr8-126824857-2	8.97945991156449	1.30822299939716	1.31135509026066	0.997611561592466	0.318467752560878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr9-70650439-2	6.02379690055147	0	1.32483053137725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87442865-4	17.8273595374727	0	1.2977258083294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83709709-4	19.8013562551961	0	1.28460963967021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22749985-4	14.3337295985617	0	1.2855260708664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114362581-4	12.3694355270027	0	1.28543313084713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85346610-4	11.3938730938017	0	1.28872424190986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114079608-12	67.3491917725985	-0.87673516945739	0.198905053329574	-4.40780741756565	1.04422328500868e-05	0.000523280788206882	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.58378038733666	5.70645035293918
Merged-chr1-183264447-10	50.9127608870495	-1.03799138106332	0.312107872899173	-3.3257455873234	0.000881823774686731	0.0172474278301943	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02954671016836	3.89593062152937
Merged-chr7-83802734-8	36.5181543085043	1.04507465460676	0.311408216245835	3.3559636518445	0.000790889626284006	0.0158187249444239	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63126841708596	5.61042763785197
Merged-chr8-35643937-8	47.4266452669365	0.728138821227273	0.248769648755787	2.92696004062005	0.00342292856395707	0.0489870104994172	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78194975732188	6.43228959611321
Merged-chr14-76081774-5	21.6297466896752	0	1.28081123102687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4304167-3	9.35291082081489	0	1.3214503429347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96661066-8	33.8156399315956	-0.130768791660234	0.291357512896068	-0.448825878421339	0.653557269047135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75400810572798	5.54205666126888
Merged-chr11-89024410-12	169.134224313652	1.23651668703093	0.211290761860986	5.85220421442025	4.85100467534520e-09	9.66444364375327e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76102813595416	6.97832529716793
Merged-chr15-97182719-4	14.1128586505866	0	1.28693929646375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37419268-4	14.4631376146514	0	1.28661998603084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23028388-4	12.3520011188591	0	1.293825724323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110498743-4	11.645388141035	0	1.28832063884512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58017518-4	15.0961226165362	-0.691033736264191	0.461047979226864	-1.49883258879692	0.133917067977277	0.765544985044454	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1971801174211	4.47206272095457
Merged-chr1-155075139-4	19.271233719466	0	1.28306401169879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142478566-4	10.6331787415373	-0.548730503195056	0.832667625454006	-0.659003048059981	0.509893811347218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78731171916832	1.22237730641564
Merged-chr18-61074836-8	53.5954651607015	0.809673458320757	0.316546652077188	2.55783295450341	0.0105326674049724	0.115461782292455	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28629383352016	5.02443162731516
Merged-chr6-37213094-4	10.9832677525053	0	1.31062344781136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31119210-4	12.9691807246668	0	1.33943817126705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74632606-6	31.2546730423097	-0.894167215487946	0.305098898669734	-2.93074547101486	0.00338149717381938	0.0485322456227545	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91173528562452	4.89515812041152
Merged-chr13-97858053-8	42.9951120126105	0.102840217705916	0.338493465980064	0.303817438272126	0.761266980535981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23998646181772	5.20693675823124
Merged-chr8-14608060-6	61.6363941995749	-1.75393928767703	0.304615648694893	-5.75787650828733	8.51786298437542e-09	1.54613409604721e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.06573950028167	5.26585841090468
Merged-chr2-128058062-4	9.23005989428387	0	1.28816715207363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57970354-4	8.59790736253248	0	1.29663904916602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86495037-8	34.4307482259272	1.34638384017311	0.281183033335312	4.78828265063754	1.68214616118401e-06	0.000123019980388371	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46285299699634	5.82795730312458
Merged-chr16-45174024-8	53.0701616777212	0.121552837355052	0.244974739701205	0.496185188331293	0.619763760156529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19161161702473	5.3379232004932
Merged-chr16-91917963-4	10.8439305538926	0	1.29941775079562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95906509-4	8.27940170102469	0	1.31632902833902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38371917-4	8.2959931175146	0	1.30104337385914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95151562-1	10.1703588321161	0	1.28919861915544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-18187257-4	14.9500730945782	0	1.28281509438839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145098578-4	10.8604180834018	1.92569944946709	1.25788804149044	1.53089892418835	0.125794375170293	0.733811751462059	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr12-3745616-4	11.203481906281	0	1.29326837592037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52303644-2	4.65180054761288	0	1.30593855872984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139640946-5	25.5744416943117	-0.753757199035906	0.308742336518264	-2.44137946073786	0.0146312718721099	0.146982561376549	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97842181004212	4.90054453315146
Merged-chr13-82949793-6	29.6971642939119	-0.83879620700516	0.389386176913772	-2.15414993324457	0.0312284157342539	0.264504478881471	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36203946034211	3.43325798495756
Merged-chr1-45902111-4	11.5128163052127	0	1.29023766580056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106529236-4	11.9729956350679	0	1.30115576039008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69656228-4	12.3604807275403	0	1.28230473000857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-133048265-4	13.8327443927763	0	1.29082359130463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13286663-4	19.7637220336748	0	1.28909768893329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119058175-4	11.2154587894967	0	1.29503350840693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101827348-5	20.6385412824875	-1.30607733392811	0.493519341597968	-2.64645622540174	0.00813400319871942	0.0941751546817007	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7671227285869	3.43726270250954
Merged-chr7-102244058-8	34.3973823911431	-0.607109218613088	0.260988231916141	-2.32619384466408	0.0200082118968534	0.1873415409961	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3467813471419	4.75425362168749
Merged-chr3-142590560-6	42.7907043172198	-1.2224658986973	0.349659637702496	-3.49615959888806	0.000472006295344073	0.0105268680462641	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79573190640548	3.63867035509972
Merged-chr1-171845216-7	32.9555802242377	-1.1281231690457	0.391559007976907	-2.88110641324393	0.00396281823250654	0.054689402369878	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35881844613839	3.09538491816753
Merged-chr4-150789343-4	10.026228505817	0	1.29334877490875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58563313-4	18.0691873898408	0	1.28106362764589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155278637-4	8.25368776015538	0	1.30142595089439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71102663-4	12.5687443411944	0	1.29230636901628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4572649-2	2.78657037454175	0	1.47313656826876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28867727-4	19.4731479948118	0	1.2914585654806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102834149-2	3.2221442327069	0	1.36744758234628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54813290-2	4.12292284045678	0	1.32105913761958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65378456-4	9.97220281509262	0	1.2920102171002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145303748-8	55.6461382320805	1.08888546949182	0.294582450643951	3.69636910519122	0.000218704938340265	0.00586197411845076	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53868782792052	5.75877918775339
Merged-chr13-3779982-8	35.1774758663882	-0.281202661465401	0.319284475409114	-0.880727636710437	0.378465254623522	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94861027734284	4.54321287641548
Merged-chr17-27083799-6	46.4415615894649	-1.70484290597955	0.239802134309021	-7.10937336271829	1.165710046616e-12	7.69439279860294e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.91072193560524	5.17150329773086
Merged-chr14-18234995-4	9.0529404832246	0	1.30244807533872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78450287-4	13.2463720174132	0	1.30309844783427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127975810-4	10.0346067089047	0	1.29271902001072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56197667-4	11.5885723401504	0.692432790431358	0.586680220144195	1.18025589862425	0.237898452679037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82854621351853	2.77265447302712
Merged-chr1-138939872-4	15.1530103201586	0	1.30621602311459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60289656-2	5.29058682573402	0	1.32243233667924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22498153-2	5.73091134909327	0	1.3451238938146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99560527-2	4.3419052241027	0	1.31968450506231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80417320-2	5.8053321337724	1.46592743175331	0.927895598416677	1.57984091556713	0.114143302916795	0.684357121974577	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	1.50954942419772
Merged-chr2-30707493-3	9.76650869050301	0	1.30411159362356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9122649-4	17.1437610022362	0	1.29406663643005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20936058-4	9.86486873340417	0	1.30174610294039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7264995-3	18.3585446113621	-0.444325679445163	0.360031536496632	-1.23412988697816	0.217154508339201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4868441759102	5.11203077302922
Merged-chr10-118981705-6	51.1691062775216	1.04503013232864	0.408492873913549	2.55825792581587	0.0105198034126107	0.115359468669317	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89551041712399	3.69391987388201
Merged-chr10-77974537-4	8.50245598523014	0	1.29064715410158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117159546-6	25.3937487970493	0.585745022662545	0.458001339645857	1.278915522639	0.200926805791006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61492725532008	3.84963837514038
Merged-chr7-128312850-3	10.0227148439632	0	1.29857561023691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16582418-4	8.02682181819339	0	1.28926577887698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6490292-4	9.2896891535366	0	1.29630205728679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95675796-6	29.8060885844775	0	1.27494958328245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107389956-4	13.9179445991207	0	1.29061407268153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93999580-1	6.4390465831155	-0.525655321170113	0.863689256883707	-0.608616255187357	0.542778827431206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52932559425152	0.898163539755574
Merged-chr4-141670398-12	78.2740804057507	0.0384289577828401	0.216808755735794	0.177248181939986	0.85931345104797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56469613267338	6.57595382505762
Merged-chr10-41665685-4	9.09829311070742	0	1.29210171226336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87571707-6	31.3728171152777	-2.24143374090706	0.41263104279793	-5.43205311386306	5.57093343746294e-08	7.60444710594674e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30738266914883	2.99448903548698
Merged-chr6-54117267-15	95.7096953529717	0.619279475134301	0.175186366892146	3.53497527302202	0.000407813318531954	0.00942992537607539	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81980898921143	6.41381547053007
Merged-chr11-80327529-4	8.40909607773895	0	1.28766811500471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102411911-4	11.0504142182615	0	1.32076083472465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69038514-6	35.1522795387328	-2.35072703440549	0.354919504990461	-6.62326809699756	3.51342945981803e-11	1.52885621042017e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9939452446274	3.57058717652133
Merged-chr13-9895255-4	10.4401067157494	0	1.29215145476561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59889905-4	9.22533204910537	0	1.29163926683582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8505040-4	8.27096717379169	0	1.30987851390002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73782403-4	9.511468763713	0	1.28310497273962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74922492-4	8.70074263705837	0	1.30306130921595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76194373-4	19.447515679733	0	1.29044904146099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80065522-3	13.5005067052534	-1.21454444628093	0.43034209716898	-2.82227663589236	0.00476840256325687	0.0627711591254197	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55350520092113	3.17799977121877
Merged-chr1-177470269-4	16.139980944932	0	1.28530746823929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134152144-4	12.8913326505328	0	1.31533059445896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23978796-6	32.0971408544995	0.684826641351634	0.276198991446486	2.47946829119512	0.0131578428659815	0.136153982568556	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40796145582339	6.07600773898298
Merged-chr8-115632371-4	9.98398674655174	0	1.31108676298985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32857561-5	19.0453536430814	0	1.28708163912091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181540634-4	11.5153049931577	0	1.30748785146915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135406361-4	12.548074824785	0	1.28814310276217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76859444-4	7.86562279594452	0	1.2940934781026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86947753-3	11.777446597228	0	1.2995812460306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76070536-4	11.3154293669143	0	1.28736128847606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51556761-4	9.21253681253354	0	1.28952767108672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112792165-3	8.92461272721582	0	1.30940179854213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79293966-4	13.3152567615927	0	1.28498214718845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184590839-4	13.0264608588145	0	1.2920323406202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9412048-4	13.769251854542	0	1.30085671049323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38431396-4	10.8776500087223	0	1.28583052359998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64241305-9	52.814813846195	1.92962275619702	0.347929415308824	5.54601787401123	2.92248962883914e-08	4.40169806187075e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87371063973862	4.80449616055867
Merged-chr2-153084339-15	203.89863499337	-0.467327704655901	0.157453396240345	-2.96803826284285	0.00299707019562953	0.0443292324589424	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.54102453278627	7.07844556627719
Merged-chr12-3823711-4	24.0552358632876	0	1.28818057964071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83903605-4	8.91621521366878	0	1.28804256589321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4569845-3	13.0814317829887	-4.30840912091823	1.03289591508848	-4.17119388118519	3.03007911191797e-05	0.00122299907132422	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44499661701229	0.563523181795778
Merged-chr4-119239427-4	14.6253645121929	-0.199550765355492	0.666071054841234	-0.29959381045774	0.764487005976258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90652891549611	1.53875279165684
Merged-chr7-109444023-1	2.26790919944933	0	1.41719432894125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-72143538-1	1.18631867186792	0	2.00485868536217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66340994-1	3.60515535118905	0	1.3979923314751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66519359-4	8.1553390692881	0	1.30294271209104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35728915-1	4.20786742864612	-0.0533774494043623	0.876084256597468	-0.0609273012297578	0.95141710659344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86803336769558	1.50871668602081
Merged-chr10-28540790-1	1.82329460736182	0	1.57404342979884	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35022514-4	10.4180268622492	0	1.29602709594017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37680511-4	13.60127241887	0	1.32146505373887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9084141-1	2.37558732630191	0	1.39337971511034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57953043-4	14.7807101818645	0	1.31583857197253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51985571-2	5.08347900535891	0	1.36095805229415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78815734-2	11.1619966680721	-2.22395571912886	0.590306269162685	-3.76746078316839	0.00016491643749865	0.00470800765608859	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34418228623686	2.67810954354252
Merged-chr12-41197478-4	17.9351950894657	0	1.29690296254814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8509798-2	2.69728352549381	0.430050494981885	1.50049626150984	0.286605509132796	0.774414395653909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0.989878296978726
Merged-chr2-102638335-8	34.264669755431	0.1811867915428	0.281430895249902	0.643805618362943	0.519701490044779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87122764776655	4.93398582629389
Merged-chr10-127481512-10	70.4325745121581	0.571605346104228	0.305774931135018	1.86936628186773	0.0615718723143471	0.431935111997136	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70096431840401	5.25741588263878
Merged-chr13-45109071-8	82.9155705210898	0.451462742508357	0.255954458438338	1.76384011930435	0.0777589008098759	0.514813099324013	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89795863530017	5.27336924860877
Merged-chr11-20959855-4	10.6694165758431	-2.80677149644364	0.646279474096623	-4.34296865201696	1.40570198447086e-05	0.000665148456750419	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58962296302736	1.32643090402693
Merged-chr10-96646268-4	15.2305766867615	0	1.29311385909094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94154696-4	13.2644208857828	0	1.28805388080225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115236685-4	17.7965891198308	-3.34263780463965	0.700430690672803	-4.77226062357271	1.82169559678959e-06	0.000129723551429062	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71146034943552	0.900948542443349
Merged-chr4-125114854-8	40.1080436341766	-1.19515739735196	0.280662446485365	-4.25834454277189	2.0594636214621e-05	0.000898982697448646	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82465785445089	4.54488266846394
Merged-chr17-84334485-4	16.2461604524838	0	1.28623348696058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49994659-4	9.49888881708067	0	1.28639957123509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161520217-8	38.7204893837997	2.15390684238733	0.391488498694457	5.50183938882041	3.75849269713962e-08	5.43368282715234e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21621656775107	4.38852684243724
Merged-chr19-43885295-4	9.53299763800136	0	1.29380444667205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63247685-4	13.1737324844751	0	1.28270329412845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38292167-4	12.6245019228591	0	1.2840298980383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117375047-2	9.46036451358821	-5.29679531766647	1.0391840753287	-5.09707129219724	3.44948447513733e-07	3.46396927519991e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76229785916103	0.306240821987646
Merged-chr17-25332502-8	55.7320446321571	-0.143647725282334	0.252389354088411	-0.569151285327253	0.569253476844791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.09082859143754	6.00785255554218
Merged-chr19-43801671-6	26.5233412728331	-4.83944655747039	0.903207905298239	-5.35806488083428	8.41180351925617e-08	1.0694118925473e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05445080932928	0.469435083901436
Merged-chr13-80933135-4	13.1917681524587	0	1.29939616380293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40939220-4	13.4927884306271	0	1.29024968220522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113054503-2	9.170859710684	-0.862297322361639	0.635643118377297	-1.35657462093345	0.174916410283439	0.925048158198776	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42020967443274	2.92717768006747
Merged-chr2-102998548-4	21.082549238914	0	1.27800944672327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166230969-4	12.6149170536946	0	1.28402251276529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149247284-4	18.4869351730957	0	1.28018740361092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8793442-4	13.0103010968575	1.21507169191637	0.649419678656025	1.87101150742916	0.0613434860239574	0.430980694304002	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66480818707792	2.89928934249206
Merged-chr19-34148646-4	9.0760254524344	0	1.28627328542949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25474172-4	13.7044151983636	0	1.30729600808788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13867601-4	24.544307951365	0	1.28978863150059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43576536-4	12.4969685246266	0.483255423289397	0.616256508209327	0.784179017749615	0.432935075117746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17353463915932	2.08706762733164
Merged-chr18-12141518-4	8.82554833857443	0	1.29375400632716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29414678-4	8.8188515919141	0	1.29331373475529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26697458-7	34.5831560877232	-0.324930185987049	0.28139878918972	-1.15469646092891	0.248214749311573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88166153252255	4.63227101887596
Merged-chr3-89295726-7	20.1560649991613	0	1.27729599004572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157071746-2	4.18075570810241	0	1.32034609369297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29864474-4	11.1206707937331	0	1.2830825949252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95817584-4	16.9303657107295	0	1.28559088819882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120156030-4	8.51596368042822	0	1.28816024627363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151040531-4	12.0105554962812	0	1.28715771713146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177131699-4	11.1374427139651	0	1.28305624096878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102658642-3	12.1801204301694	-3.94570071189649	1.04127653526283	-3.78929187230803	0.000151077325725175	0.00439354647389287	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93241659595632	0
Merged-chr2-38950592-4	16.9001784322136	0	1.29797944877219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43854313-4	10.0244153046071	0	1.28568093793225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89351262-8	43.6172522534272	0.33177035428925	0.330764736130795	1.00304028225686	0.315841425870517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31559264280111	5.61170786081057
Merged-chr18-5680331-4	11.6214242994513	-2.30847987034968	1.07310978054014	-2.15120569415343	0.0314599678024153	0.265618011201821	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20812796562842	0
Merged-chr6-135007802-8	54.2704384894492	1.38938729702093	0.227806426968788	6.09898199760315	1.06746089748298e-09	2.69321620876149e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38267777214999	6.81573850669905
Merged-chr7-117470282-4	9.47293719868365	0	1.28540859392291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9597577-1	3.04010018787997	0	1.33258126940995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26585564-1	4.94142345000255	-1.84852666359532	0.872759834418543	-2.11802444463643	0.0341729975130307	0.282309569593743	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64973260737402	1.95040317292908
Merged-chr9-57421415-4	8.27847227784301	0	1.32211277850125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108847709-1	7.37750417718466	0.659906643580619	0.635412688132744	1.03854810567264	0.299014951356708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10262295077284	2.56287028992079
Merged-chr5-64290167-3	7.89291019755646	0.124408355750229	0.911072557471894	0.136551534485295	0.891385287410484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15053321103858	1.04885222765555
Merged-chr5-44212094-4	18.4835658558559	0	1.28184420155704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4489261-4	10.9565521803485	0	1.28880304664687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4498400-4	17.8309148717687	0	1.29057365323387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12132310-4	16.9001115683194	-4.44005989546989	0.839048280141002	-5.2917811770304	1.21130775846893e-07	1.45771854115858e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09357585389438	0.683637474991079
Merged-chr16-65416381-3	45.0443854788856	-2.59711833241562	0.561154820141594	-4.62816719949105	3.68916121487805e-06	0.000228071834198128	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9679640721544	2.22281280114811
Merged-chr12-52687584-7	33.1226483285394	-0.141389768424495	0.311889458162393	-0.453332950903638	0.650309009010142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86565294768829	5.73309055759185
Merged-chr10-19099813-8	40.11508151377	0.456307591592787	0.35033089357665	1.30250457484404	0.192743955091992	0.991970267735788	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6941156979008	4.19572265047646
Merged-chr16-21640997-5	32.5354233773376	0	1.27867688519688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31195330-4	14.252889315524	0	1.29106658920113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32521532-4	14.6124427848689	0	1.2943669454469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106419623-4	20.5393331654672	0	1.28066774282382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88436962-4	14.5920884218326	0	1.28278612546519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119492405-4	10.4369980984646	0	1.29250143177577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134117175-7	46.351201191783	0.595916315164489	0.27603116715493	2.15887329429729	0.0308599982426068	0.262336079766019	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06856664153758	5.6169434634738
Merged-chr17-3314310-8	43.9908704295835	0.0209657247074182	0.27195549394364	0.0770924845216149	0.938549971691635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39390164580958	5.44891126990706
Merged-chr2-122777061-8	43.6771921084268	0.249839882946361	0.280391160524715	0.891040510973379	0.372907437426714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50351900173782	5.78818058065804
Merged-chr13-42246010-5	24.9122660172087	0	1.28862098271706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10950745-4	8.24358543700277	0	1.29774829172762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97855823-10	50.0584955415543	-0.692259939694547	0.24888019954195	-2.78149865263935	0.00541085552717882	0.0692339465985955	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03130944783173	5.18346894570655
Merged-chr17-84878062-4	8.81480843402523	0	1.28965199297882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4237188-4	16.8821722468286	0	1.29092678171984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34521614-2	2.14959500309121	0	2.43472177261506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56897836-2	3.00279709888365	0	1.43592505757325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99496846-2	2.98357731085739	0	1.37638590187658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25649926-4	17.2699450033409	0	1.28552722266197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32937147-3	11.9619307673011	0	1.2925055505818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53294551-2	3.24643469952365	0	1.448605424321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43738692-4	20.19704920247	0	1.28533059186394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94381589-4	8.5052030871063	0	1.29425593025449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68469130-2	2.52457433578737	0	1.44996381841402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78382909-5	22.2307973720305	0	1.28574272285466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83855860-4	7.32463144686447	0	1.28697273180606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99464206-4	9.25719772228181	0	1.30150902264859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16820559-4	11.4333565055617	0	1.29104820015746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10660177-4	12.0916865763106	0	1.28453856993077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81041158-4	11.6177168863185	0	1.28428130604678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69415681-4	24.2514905966901	0	1.29956153283316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105300793-5	63.9062644828752	-0.550410563186547	0.154646727637305	-3.55914781771156	0.00037206009115836	0.00876131124930962	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.40991760285306	6.86590819465611
Merged-chr12-44266021-8	44.5263523438976	0.957208453376378	0.254143107744561	3.76641515825984	0.000165608325208797	0.00471951226301528	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68720200710515	5.65589306495687
Merged-chr8-3221898-6	21.2045914765835	0.897636242264562	0.444414647791279	2.01981695861236	0.0434023774077515	0.335376315997414	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68734703468424	3.53901644661592
Merged-chr18-9489843-10	84.5853624351214	-0.0631970694840081	0.315412176303009	-0.200363442606274	0.841196348306682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20157194864962	4.13936571926576
Merged-chr17-69223676-4	14.9559306585204	0	1.28997738637415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81405682-4	11.0292321810447	0	1.28796413911832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59452665-4	9.57559976968492	0	1.29451914716154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8766400-4	15.8739269506839	0	1.30129053421433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27234987-1	3.37167672771761	0	1.34667859348591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93939669-3	4.81488514755626	0	1.35187766872845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7114067-4	17.8745572309894	0	1.28863999785577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75315611-4	14.5471260532569	0	1.29880197471477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130902397-4	16.2622595223534	0	1.28786166566234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97797747-1	2.57123988958472	0	1.36528660692679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194672005-4	14.2426509829981	0	1.29054012470065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74497374-4	15.2754930369025	0	1.28852244927944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88794888-3	6.9121256200958	0	1.30895611787858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118144579-8	61.3695643435322	-0.937420795627916	0.259236590862401	-3.61608209901774	0.000299095551072389	0.00745980835128869	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70511227209956	4.56535631836798
Merged-chr3-52634554-4	18.1146385342095	0	1.29269662076202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33503055-4	9.09445242208193	0	1.29037655421532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95674707-4	16.6261087899215	0	1.27941280362893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24424427-3	7.64953167310147	0	1.30345422746487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67396834-10	85.0829820310504	0.00100597811364595	0.282988454766442	0.00355483800381966	0.997163655614352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34695493844818	6.29817730932234
Merged-chr17-65763756-4	18.1454951976687	0.758905579159691	0.618325430260946	1.22735624643388	0.219688723713839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45502248361195	2.86448155788252
Merged-chr13-30769413-4	10.7594361757569	0	1.29802132470562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170573510-4	10.867520129772	0	1.28140254766924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108098692-4	12.3093584664986	0	1.29441563390901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40760570-8	45.3199133593957	0.953984599306764	0.281777766042044	3.38559217324628	0.000710248522882575	0.0144856117279291	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25624864425004	6.157904669393
Merged-chr10-58399575-4	12.6298036180788	0	1.28065489995299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42340346-6	31.1115455303567	0	1.28611297295512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55487570-9	46.7219426226841	0	1.28051140246572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102899472-4	19.0028899404025	0	1.30661546283778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15062943-4	17.108713908151	0	1.29748531997889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40985850-4	17.3265038189589	0	1.27914771604053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80813053-4	11.2671883786782	0	1.3058220342437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13295723-5	16.6092222391627	-0.793966059662914	0.499072049888088	-1.5908846424899	0.111635539379637	0.674021616585215	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17355248682826	3.23279526911171
Merged-chr8-84423161-2	7.48936855013105	1.67513575857042	0.593095052643712	2.82439678278132	0.00473697027923218	0.0624580427495372	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49882535252155	4.1181421158536
Merged-chr5-125278576-2	6.78102823430969	0	1.29772027856533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111725606-12	182.513942031526	-0.639884705698514	0.168642257545984	-3.794331948646	0.000148041508874089	0.004322573922648	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.63734935891166	6.97230176329504
Merged-chr10-79923937-5	14.0013089172672	0	1.28462330604302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11391145-4	11.7713438777016	0	1.29943474940231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105013250-4	19.1573211420468	0	1.28466452450333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176801124-4	9.78660529520066	0	1.29494485001564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89205599-3	5.1212133717261	0	1.3943664040883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86902584-4	15.3355129928209	0	1.30384770778858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100343809-2	7.61586201753688	0	1.30951029652784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17278596-8	29.2990770753797	0.400401273565063	0.278023529384076	1.44017045770226	0.149819179105876	0.828404474348669	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90906589608255	5.29822827205082
Merged-chr9-94818802-2	5.9749061630363	0	1.30625416564819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-158061169-4	10.8107107750378	0	1.28982123232167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67431050-4	9.76542783350505	0	1.28566151578702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64482285-4	15.0201450482725	0	1.28252487424513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140863718-4	13.1868397958966	0	1.29826330096798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34747195-4	11.5930055296727	0	1.28706144355647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87315444-4	10.6316944427385	0	1.2939760939503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47133279-4	15.3961872745523	0	1.28487809397342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145866812-5	20.7683657571356	-3.88907260610981	0.69986041259366	-5.55692611859132	2.74566906600204e-08	4.21076389923156e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11495888151251	1.08974267817771
Merged-chr9-40325822-4	14.0181696377762	0	1.29089334681639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30070861-2	3.67990464746912	0	1.36828094183903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61363385-1	2.94138584952287	0	1.38015951115521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144971233-4	8.56152695029311	0	1.28805417280939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11530286-3	18.1512791604953	0	1.30227185650997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76217877-1	1.88049153808695	0	1.43641927649013	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17764245-1	4.17960744960428	-0.538501736880951	1.06127217129837	-0.50741153065584	0.611866096851695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18127828335721	0.733321818366247
Merged-chr6-90477356-3	8.02931222577985	0	1.31666765309243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163827770-4	12.969954287565	0	1.28471529742932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45367285-2	4.89899049040465	0	1.34232646778643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23091741-2	2.81996500592273	0	1.49348449672181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10142859-1	2.18802375053944	0	1.37306969596168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3189673-1	4.02666310360439	0	1.37124914669279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55852562-4	10.5034877056129	0	1.29245997614636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113490201-2	6.52372909100188	0	1.31142653469304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4302546-2	7.61988926483386	0	1.30147202791775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121995595-4	14.500174566144	0	1.2878579565434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96328634-4	9.76080588559859	0	1.2908164736966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54914622-4	11.5055423782112	0	1.28107987428968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29848989-4	12.697826708073	0	1.28796727620668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142091289-8	47.8329527053002	0.458709169221114	0.250661340661114	1.82999567468712	0.0672505856167716	0.461643437920724	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39171702007295	5.83657000495189
Merged-chr3-132116312-4	11.5311442552492	0	1.31139609280726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124613655-2	21.9277872232996	0	1.31119850593506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101361317-8	48.5868958605412	0.958977829377704	0.243450363479972	3.93911027968786	8.17843339384918e-05	0.00270596409394668	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83328754708259	5.8728466722224
Merged-chr3-55978533-3	7.4222607148948	0	1.31442969606291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84181743-6	29.9147201279932	0	1.28218174945894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85964697-4	21.2570009914692	0	1.28558629033021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34082671-4	18.6703905847389	4.58802244121381	1.02850233191411	4.46087704310323	8.16249143549549e-06	0.000430497308590709	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.4360226934973
Merged-chr8-33492506-4	18.6516874889034	0	1.29181592587259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53577222-4	15.0566359906907	-2.42574490954164	0.591388672697519	-4.10177776736409	4.09987949054955e-05	0.00156398555276971	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89857314264925	1.62319166842064
Merged-chr8-115597339-2	5.92037081456691	0	1.30366923672399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76313427-4	10.5480475386668	0	1.2862426456183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101318328-4	11.082058774368	0	1.28614980811675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7976360-4	20.1440993856182	0	1.28360778628697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51072185-4	12.6391949803235	0	1.287695797277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-117486639-4	16.4701629287115	0	1.2934191797384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134673898-8	47.9707786266131	-0.899525506204342	0.316812297373639	-2.83930110561166	0.0045212471089105	0.0601967020331837	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84470824001288	4.98872933185687
Merged-chr17-84361183-4	8.41977573307695	0	1.29409888692117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-121197205-4	15.3235709001357	0	1.291021262333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68283252-8	46.6708795360612	-0.408092221774161	0.271144707427043	-1.50507168532496	0.132305647687015	0.759913356909941	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39740326240979	5.00809067991353
Merged-chr13-107945077-8	58.9924874961312	0.125531568328241	0.244510186995095	0.51340015674177	0.607671435971736	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85193034279131	5.06163358398798
Merged-chr8-83989445-4	9.59952493244897	3.05012924941451	0.90346012433413	3.3760529848094	0.000735337566159063	0.0148950305636175	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	1.83225203110276
Merged-chr1-120038844-4	8.47116980037706	0	1.30993466504345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80692080-5	34.8598187118747	-0.536866768754431	0.374524292775037	-1.43346314007168	0.151725525447443	0.836044876118443	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03907005916267	3.55758880326738
Merged-chr7-34302087-4	8.96848733324166	0	1.30311591955939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71118184-4	13.40806876683	0	1.29143133901117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7308428-4	12.6197673041636	0	1.30178765598467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143288632-3	10.872314171936	0	1.31586542826842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61408060-6	27.8362378450415	0	1.2769667970277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117724704-4	9.8882389980684	0	1.2860866853854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98608632-4	10.6615073035281	0	1.29128692917822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94711500-4	13.9363769470733	0	1.28267925904479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-97534550-3	7.20887778146877	0	1.30436542108792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63612178-4	10.3326633524556	0	1.2865717795278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34473241-4	9.95429793635227	0	1.29034689946493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132656269-4	9.09042545691253	0	1.29057747899294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60619801-4	13.8884941588691	0	1.28400760359088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92939240-3	13.1392026543397	0.0217560557018045	0.803338066760097	0.0270820674408568	0.978394277624255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34888032438169	1.29684500016202
Merged-chr6-81987178-8	27.5691231839215	-0.67829741560281	0.418675517915564	-1.62010288774421	0.105210177212796	0.645182454968783	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74102128386341	3.89506971517333
Merged-chr10-53893235-4	7.66087503444365	0	1.31675259711951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28864806-4	21.3175160989766	0	1.320269296599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48537086-3	11.6813097949672	-1.29734779033813	0.659218989568925	-1.9680073099631	0.0490671966335556	0.365937574893441	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11728367732743	1.81534621159246
Merged-chr4-148676841-8	35.9211413954891	-0.608251224222514	0.276717410737899	-2.19809524308768	0.0279423194445494	0.24264701746492	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65817879332018	4.9375769374819
Merged-chr14-122056860-7	24.3975278092191	-0.143904941929644	0.419965078255781	-0.342659305214893	0.731854780901653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00187777165208	4.64361600567935
Merged-chr8-117280562-4	10.3065036574753	0	1.29159139813318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97398558-4	11.6316298216102	0	1.29118219050299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113611405-4	11.9895049116881	0	1.31586785162742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180835829-4	11.1944879341213	0	1.28749190798569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72551420-4	13.0652184034965	0	1.30695345240315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87247083-11	125.304387945102	0.534387680309702	0.177634687269158	3.00835207652873	0.00262668639556714	0.0400755193100001	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.35569946970817	6.88969438037881
Merged-chr14-103945917-4	18.4488482933532	0	1.29148215956326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89289448-4	10.3329042415639	0	1.29874574643427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91030952-4	10.9178939097827	0	1.29398985450837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26733066-2	2.99340306129611	0	1.36115224664558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21218107-4	10.5780668047452	0	1.28789483098468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29846741-2	4.07738556484914	0	1.32481031523639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102328353-2	3.98705112557142	0	1.36567584899704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83065464-2	5.47057133904776	0	1.30017735575477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3131539-2	4.84291981145295	0	1.35834882598771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9630608-8	70.8667116205288	-0.355877926663727	0.266260993162119	-1.33657552477859	0.181361232600648	0.9498462054598	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02991002370241	4.63957248413422
Merged-chr16-25805141-4	6.81514189539122	0	1.3237270030904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149274805-7	32.6110946094815	0	1.27921710944547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100343215-4	16.6060578526162	0	1.29116342437299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9947869-4	9.93123193474956	0	1.2868287292607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-40308218-4	22.8006749006565	0	1.32227396642926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54025818-4	12.1490862535243	0	1.28293035306096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81263022-6	31.748679659446	-1.87471388122035	0.437107331139493	-4.28890972002956	1.79552332126762e-05	0.000808616588225732	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00143362785905	2.85971213640217
Merged-chr9-119076829-8	40.6707658026458	-1.64993492273399	0.387364479601593	-4.25938621019399	2.04989020193128e-05	0.00089660056984874	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43878785419197	3.64989173876739
Merged-chr6-135161517-6	35.7406102100674	-1.00822790320208	0.36149215907825	-2.78907267524945	0.00528592019275073	0.0680187120331819	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74831514644767	3.57845666590341
Merged-chr7-106617113-2	6.52952287835996	0	1.30460602151937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70420692-2	6.55812408981466	0	1.32972598612552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166921046-4	11.8684279750307	0	1.35234210186573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88067936-4	8.65166166289352	0	1.28753583372636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117831039-4	15.6557146214	0	1.27900373398323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118158296-4	9.24975059550711	0	1.28562624997318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100182583-4	8.96048275536549	0	1.28930983983764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123062133-1	4.05753985673071	0	1.38788832704917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105764810-3	8.06896049851572	-1.00952809550031	0.625695346319927	-1.61344990247718	0.106646798939577	0.651851250912505	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75857986059916	1.82374999908923
Merged-chr3-139064504-6	29.7792901119191	-1.54738362913595	0.396140871305357	-3.90614486214725	9.37803041347109e-05	0.00300695179292778	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68801170607429	3.11742056194996
Merged-chr8-70549890-4	18.3382132545161	0.214200406057063	0.407230527989289	0.525992997417661	0.598893072386281	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55930974742259	4.58475686803041
Merged-chr11-23679431-4	12.6078959443744	0	1.29290845702134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47056502-4	10.8506237219803	0	1.293205608718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116587800-4	8.69619309097018	0	1.29912190675738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34079772-8	50.0906463125362	0.132709056269354	0.29498323141107	0.449886780460477	0.652792080048716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94070071781663	6.12828948278538
Merged-chr1-128014168-4	13.5158523175364	0	1.31994099767126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51500382-4	11.6167119005411	0	1.28450930977929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80453191-4	16.3080152519183	0	1.29506688079684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92488352-4	17.1568380219853	0	1.28685839928301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55236256-4	17.5489603312946	0	1.29362062095326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99789776-4	17.7065848034983	0	1.29712006766837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121545657-4	9.37251775457049	0	1.28917849973912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-39847183-4	37.4714782102949	0	1.31411116961468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162622064-6	61.3611881215784	-0.215765897631929	0.23699387265044	-0.910428169382162	0.362596747483549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.13966274104683	6.91338151197494
Merged-chr4-123635588-4	8.59946489735072	0	1.28639359420382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99134106-5	26.314689427515	1.3430573463596	0.495497388581559	2.71052356139417	0.00671770755973889	0.0816394491721587	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93663475853198	3.33773048058368
Merged-chr12-78299334-4	20.6622413477393	0	1.3260677829024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67258552-5	18.0055540947514	3.12362955773279	1.06978835508441	2.91985750535331	0.00350191468556017	0.0496713950602594	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr14-51870928-3	32.8590869639592	-5.19762003377059	0.764216460711361	-6.80124061830919	1.03722013188958e-11	5.2541230029811e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.98535002834108	1.69686753743604
Merged-chr11-100719439-4	13.6766934867976	0	1.29841710193938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40501648-8	87.591557117458	-0.293356220687783	0.194770340216117	-1.50616474953155	0.1320248861091	0.758777326973195	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.34711643769361	7.05575828154959
Merged-chr5-113918924-8	40.7161446473929	0.33020180277766	0.293948272901297	1.12333302563249	0.261296082594435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45453655416929	4.76290724711939
Merged-chr9-70740167-4	7.85188706185129	0	1.29432639345534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99459398-4	13.581222086937	0	1.28250219663703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16046200-4	14.4735585854456	0	1.28086530369459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62483244-4	14.645476642453	0	1.2925626572288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21333089-4	13.5613625970016	0	1.28914527483123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34005808-4	11.3346448257805	0	1.28392635097459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5429568-3	7.25623986901569	0	1.29498410678356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96757641-2	4.40725295054196	0	1.31796817918162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5605593-2	7.53504193521321	0	1.30377352047141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17319953-7	42.4623095614085	-1.09183963253419	0.267526424321669	-4.08124033094159	4.47960056112434e-05	0.00167270844724132	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16039959985597	5.08640108552509
Merged-chr19-56556167-4	13.2347656667198	0	1.29344768496795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77909068-4	10.7170955231532	0	1.28606405651347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28746313-4	6.75162969115684	0	1.30712153223847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134027206-4	17.2487883273027	1.27548937153912	0.518285350731559	2.46097901424141	0.0138558470443903	0.141273861907119	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10014649337619	3.36821206385671
Merged-chr8-110594317-4	12.9163749946013	0	1.29431082341432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125385824-9	71.5095999127295	-1.36352068822978	0.303358070530782	-4.4947565952145	6.96495706797518e-06	0.000380537922810102	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.41926409640622	4.95615775900561
Merged-chr1-106553069-4	13.604991938999	0	1.28849086655489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85518395-4	10.4030943138943	0	1.28572292787011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40117084-6	24.6472130605032	-2.08236664350514	0.475422227973444	-4.38003635711677	1.18659509359379e-05	0.000580383555284278	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73581582729221	2.67154369292436
Merged-chrX-86951145-3	9.08404755398248	0	1.31674214460944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97345947-4	8.33157763017919	0	1.30936823119691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150594575-4	11.2410542633388	0	1.29222353038455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99325978-4	11.895270597533	2.89612556005784	0.800840189500968	3.6163589165805	0.000298776038298026	0.00745468461192165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	2.69422113745304
Merged-chrX-38439858-4	9.34355114473651	0	1.29567684451882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53996823-6	32.4917445955216	-1.49762246191017	0.398595813296997	-3.75724584140145	0.000171793705120627	0.0048488793245751	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60430662391216	3.85711347477297
Merged-chr3-41228700-2	2.32904569578299	0	1.4617404378689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35860922-4	15.958902117956	0	1.28661446611231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186677818-4	9.20643493160753	0	1.30244067877552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157457320-2	9.01472313409488	0	1.29664149051283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38923255-1	5.73172245326607	-0.225612850819059	0.925075008226017	-0.243886007959191	0.807319106062649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91429266799918	1.46928333126936
Merged-chr7-121332875-1	4.84731672499526	0	1.30731114244452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34572648-2	4.24276294994968	0	1.400335365496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71893790-2	3.97826335446895	0	1.41399513713981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157428519-6	48.4416940685691	-1.41154961330321	0.45437719328408	-3.10655911909008	0.00189278457076337	0.0311472930146319	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64644361250889	3.37210355657933
Merged-chr10-122690807-7	35.460195687675	-0.997871627866331	0.410526803005125	-2.43071005488982	0.0150692682666866	0.150154986909866	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60897624594984	2.93243551476186
Merged-chr6-83017275-4	8.98604941500181	0	1.28977930736327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-27109657-4	10.5695602547443	0	1.30574827325683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10460337-5	33.9416232009449	-0.80204938172751	0.46092760086289	-1.74007670668021	0.0818455497662205	0.533866546019498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14942189907683	3.44846862147826
Merged-chr4-86396880-3	7.93624886636854	0	1.32811671196159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19416190-4	18.7526122095305	0	1.3058183703068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110608979-4	13.4404513263309	0	1.2910747509579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123436352-4	8.47314649257716	0	1.30253992982858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144704145-4	8.57324617397757	0	1.32345023568384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7774726-4	11.985430056948	0	1.28070273839151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146819482-4	16.5743100754382	0	1.28464617465145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129338417-12	103.92985897967	0.142024914719684	0.184438980128452	0.770037410859524	0.441277701275503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19394167798402	6.39337124484233
Merged-chr11-105424521-4	7.64386469119686	0	1.32521084208746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33398271-4	13.777298798465	0	1.29134580021532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34846648-8	41.7740928451244	-0.217709421253014	0.245229410844181	-0.887778592720867	0.374659860288054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24205371135292	5.00421741898872
Merged-chr6-29781896-4	9.08437795820644	0	1.30894242053566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122644391-4	13.5335873584321	0	1.30200655804586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5138886-4	18.6949839055634	0	1.29791656460383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85522460-3	12.2193542451447	-2.39805793866045	0.596588060940635	-4.01962106797688	5.82918212143598e-05	0.00206345468530528	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49986435824499	1.96739710961373
Merged-chr8-82398733-8	43.6512123299683	-0.190678219237397	0.289941700364457	-0.657643308974575	0.510767358414241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20309819164239	4.8318137369055
Merged-chr13-49324466-4	9.93182867746096	0	1.28633611838743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31071055-2	6.20110931518277	0	1.31130797867365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50674730-4	10.833209167173	3.3903758340748	1.04529868384276	3.24345173918233	0.0011809081465335	0.021585349298847	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.71989966306259
Merged-chr7-114016431-6	28.0092385269119	-1.23062374734329	0.326728372307355	-3.7665040799874	0.000165549379819123	0.00471951226301528	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2311035502885	3.91341257571854
Merged-chr14-55677719-3	9.22642436850464	0	1.30665393121992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50997270-8	29.2828804266175	0.180063024133892	0.302847718443588	0.594566223114645	0.55213346360635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74480455179859	4.86320468120521
Merged-chr17-74668066-4	13.7422229116566	0	1.29518021180031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37525638-8	46.6668499132869	-0.432915105511388	0.268840143933318	-1.61030677627805	0.10733090064805	0.654682298510425	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10523652584458	4.70933253621819
Merged-chr5-72329646-4	13.1441569531772	0	1.29926796685883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75788377-8	42.312441531873	-0.780395923303127	0.25671152846819	-3.0399722519662	0.0023659994591838	0.0369223930768375	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75178937740502	4.80940114153216
Merged-chr11-113430316-3	11.3338037372133	0.928700556890178	0.602856157730617	1.54050107141008	0.123438261842099	0.723685327322251	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70692026393981	2.73238230963349
Merged-chr8-84197697-9	84.4780729225236	1.78591501361993	0.276611212125594	6.45640861733777	1.07216873307231e-10	3.71431325249334e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91494824371102	6.66874922399198
Merged-chrX-106031332-4	15.028232464053	0	1.28372527331915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93193592-6	26.0525621781432	-0.628715271671426	0.372313952543205	-1.68866964930213	0.0912827550646771	0.578723776968342	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28747233875131	3.40175758108277
Merged-chr2-167701657-4	11.8921923678845	0	1.2863595048174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9430045-4	15.8617531071728	0	1.29604429838162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164680064-4	13.872799587892	0	1.2887825081431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32906248-4	10.4847005713974	0	1.29447788565871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12307920-4	13.9488932007209	0	1.28559880979975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81712584-4	18.7498351413587	0	1.28477932976512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72014059-4	13.6445440735234	0	1.29593580448587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53424799-4	15.8915721931465	0	1.29641365756345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16263184-8	48.5511292455817	-0.12028516911594	0.264932031567271	-0.454022748417258	0.649812453672883	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27407857485417	6.14528172175407
Merged-chr7-114509073-3	7.93446412535652	0	1.35718503902485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8993638-6	31.6498537915776	0	1.28150942876212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113606311-4	10.0009142858972	0	1.31517679809116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24407018-3	6.86623091788285	0	1.31607112506793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27761930-4	13.5794107216725	0	1.28503225193051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127118851-4	10.9250801490242	0	1.28667029721362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50642427-4	9.08354077635595	0	1.2962782891446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-108813818-3	5.25561939720709	0	1.33972718682838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21463663-3	22.4066817020115	-3.3018476986091	0.520731982079119	-6.34078146194489	2.28602619894775e-10	7.14749607638466e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91626516385947	2.35526103100457
Merged-chr3-14913505-2	5.43056411116719	0	1.30575724457214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119386465-2	6.17456560352275	0	1.30280764840207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35742242-5	30.1139700175961	-0.237315537681648	0.321894299133884	-0.737246786663168	0.460972286029113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07134588117317	4.82735955565199
Merged-chr8-125116743-8	57.0269779980337	-0.703977449922007	0.24513876828646	-2.87175078361887	0.0040820474662187	0.0557928202734841	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.65288430198714	5.96877788527772
Merged-chr5-96912314-12	58.40693625175	0.246891786939614	0.211534745627504	1.16714531320718	0.243151691193512	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62837413873712	5.86762120257544
Merged-chr5-122146501-4	11.2324104199527	0	1.30052512509123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-15850581-4	24.3481197416347	0	1.29510185705892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45006033-8	46.3816427634268	-0.0713899354998279	0.2422226250923	-0.294728601313046	0.768201212474782	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33895411669725	5.19998860069675
Merged-chr12-55416128-6	22.3262076930211	0	1.28770227779294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117072520-6	24.1295626557587	0	1.28331193579848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45593280-4	12.7423155352027	0	1.31266774606316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120305272-8	39.126104975664	-0.47571257275927	0.320192222973651	-1.48570932904394	0.137356021969382	0.779112546894785	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99709205040471	4.42234397243456
Merged-chr19-46309209-4	8.31125311527385	2.86196480727246	1.12618397044497	2.54129421336165	0.0110442939497712	0.119804188652348	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.825079211029734
Merged-chr19-6871822-4	14.4899318254937	0	1.29390560149282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32239989-3	5.73167840889265	0	1.31572366499353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102843886-3	7.65362385226031	0	1.3298647086357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71206337-4	9.40002719216314	0	1.28315790970838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5615052-4	14.9151245340431	0	1.30395908752588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6335549-4	11.2747681356103	0	1.29442210490496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45677125-1	7.95315568687785	-3.30213422817141	1.20539922042383	-2.73945276570723	0.00615415571194309	0.0763381661261642	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35609742567813	0.382164212378408
Merged-chr1-34564564-4	8.71887580119402	0	1.29467741519498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58940635-3	4.84269830802349	0	1.32856176759051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20371899-4	10.9995646970534	0	1.29876896607351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98058220-2	5.09816262201273	0	1.34751071148314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4900433-4	19.0721244465319	0.889517536116434	0.553827408788798	1.60612768888015	0.1082458572586	0.658422581068645	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80543145078505	3.08622768639799
Merged-chr5-95923015-1	3.65062530320317	0	1.3140558617389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56757618-12	86.3068293726686	-0.00355579819025521	0.28251343334931	-0.012586297749101	0.989957852486642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87457374295459	4.90032211006254
Merged-chr11-43410480-4	12.6882044277432	0	1.28321567025789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58829101-4	15.0188508021226	0	1.28775913504538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86202019-3	18.5573617420058	0	1.28123992650126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62684792-3	18.7615344662177	0	1.29980399938374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67448204-4	17.4760344460578	0	1.28551297372449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13501402-4	16.2239903911435	0	1.27801960606174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87753694-8	50.5525810222217	-0.316251107690561	0.28937566705965	-1.09287387880257	0.274449178523317	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49583093059008	5.16574378632745
Merged-chr19-16209793-3	8.15238975549743	0	1.31147522922581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136138349-6	19.8900654493906	0	1.27888394410359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124496208-4	12.8808358529482	0	1.28100924059148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64072023-2	4.6004009450912	0	1.30539138014503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120762358-4	22.4650957111007	0	1.29356482300863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38484790-4	8.67452708368931	0	1.29155122489037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6297084-1	7.75338303661394	0	1.34487542020471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53373966-2	8.02185307300372	0	1.35010275271598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82670445-8	38.0553893134795	-0.768777180164898	0.28904642018698	-2.65970144057687	0.00782099456009213	0.091327861065722	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.650950574104	4.91772865988611
Merged-chr2-52999715-4	12.8958828598979	0	1.29123525745485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48832648-4	19.5761864461336	0	1.29389494828743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10120653-4	18.0224742375675	0	1.2941814907504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125623385-10	80.0232272550042	-0.515763976122341	0.254018700231242	-2.03041734979678	0.0423141345622589	0.328899659462991	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71721885286122	6.18596230722381
Merged-chr13-118775321-8	95.5242214854529	0.737139804480083	0.186745146043444	3.94730369221269	7.90362760624951e-05	0.00263236722506616	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.90609512803234	7.67682821506911
Merged-chr9-111063043-8	57.6099287469793	0.46482425205477	0.264690241266745	1.7561064957674	0.079070226192762	0.520964206573122	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08840108136045	5.53656473805096
Merged-chr10-96334852-4	10.1413143168652	0	1.28513212200276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47148572-12	97.9581279585758	-1.07246292475274	0.194018566440853	-5.52763039345355	3.24584968197912e-08	4.8425409433472e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.94105476694962	5.86935018703441
Merged-chr9-72526279-8	35.7928247651663	-0.864209704454255	0.270639458430265	-3.1932139883325	0.00140698639986327	0.0247020239885721	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01790390149171	5.14380117517231
Merged-chr4-62641067-4	12.213918595749	0	1.28819351836979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58503244-4	14.9861797276112	0	1.29177492929262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50285440-4	14.673511901198	0	1.29125819026501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115018596-8	36.6207431752982	-0.513136398969824	0.327511049544165	-1.56677583759087	0.117167097065342	0.697939938453219	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07383017067386	4.49105328936558
Merged-chr11-118104175-4	11.4548290916142	0	1.29627790361919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76218519-4	18.4278484937826	0	1.29563445824284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115816072-4	10.659579876715	0	1.29419997143795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13655296-4	18.2069195150087	0	1.28739082282914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96572124-4	17.3839140344882	0	1.28208027922821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71483981-4	42.540812785515	1.08650366614464	0.443891724028067	2.44767723147714	0.0143780392676707	0.145238422319556	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32586947992376	3.60746428566538
Merged-chr16-35907636-4	9.9620220686523	0	1.28720939357493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155627226-5	19.8741056511189	0.15882519922409	0.5192381506965	0.30588122042081	0.759695085024129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10691156903722	4.72989318984745
Merged-chr14-47515260-8	42.4621785003167	-0.523391786680591	0.285275898399843	-1.83468631460414	0.0665521811897999	0.45782912222641	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83420142422874	5.30347137488031
Merged-chr9-42128178-7	35.3377775828167	-0.795199731683401	0.341930985579483	-2.32561471530796	0.0200391138445679	0.18755026257335	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68922587083147	3.83006751535612
Merged-chr10-53876105-4	14.6568343920508	0	1.32075850353809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92651117-4	19.7061460450523	0	1.29527458239248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70062324-5	37.96741975196	0	1.28179688560139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44514261-4	13.3806452456062	4.7033009366981	0.991404077965605	4.74408068438596	2.09455358326851e-06	0.000145452389428548	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.77223252243827
Merged-chr11-5758008-4	12.0550959578435	0	1.28212238163231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53521725-4	12.4863524335279	0	1.31242153526958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60650136-4	19.2587927871721	0	1.28193989331493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33954920-4	12.6316938129761	0	1.2886700434867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16584210-5	27.4206753955227	0.605645762212211	0.403993194512404	1.49914842734712	0.133835130740682	0.765210469278203	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54875447188301	5.11857039252692
Merged-chr1-127219330-7	38.1266013346024	-1.86178047175523	0.374043186810508	-4.97744789212914	6.44281187321158e-07	5.67401596586097e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31990556778343	2.89170664533402
Merged-chr10-15154982-2	4.41315093579753	0	1.34103179753708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113509508-6	66.2527343332648	5.09283916871705	0.770747473000756	6.60766249273457	3.90435540100357e-11	1.64602585828374e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	4.83569389685282
Merged-chr9-37094364-3	9.19183467557018	-1.06472989456999	0.551740787656055	-1.92976469818962	0.0536359994103127	0.390170101020405	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04962132656878	3.16161743275258
Merged-chr1-161482380-8	68.9566877933244	-1.62874973671352	0.233743897712752	-6.96809522152781	3.21260769002809e-12	1.80975053545324e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.64170716632199	4.79062009246741
Merged-chr6-29940600-4	11.0205134497083	0	1.29081523421492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50050549-4	10.6927746532324	0	1.28714684714333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-16379515-4	10.2971754603413	0	1.28628259956262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12165328-4	11.4607787112331	0	1.2824591116293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23912209-4	12.8810538221704	0	1.28412537185743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167799804-4	11.4064330245377	0	1.28815862950052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8691957-4	9.34112316159821	0	1.28553996101342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3726939-4	21.392158150602	0	1.28238586621127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34535308-6	28.1431858084815	0	1.28307005669276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41628312-3	16.476418535359	2.88762809211472	0.687133013406943	4.20242956716238	2.64065423714332e-05	0.00109489969403786	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708390020836555	3.43851920339405
Merged-chr19-55820393-4	13.8244744814867	0	1.2839654612632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172348326-8	45.5221241448557	0.150116478312658	0.24411719951809	0.614936098763222	0.538596921872831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75633410776276	5.9467017948487
Merged-chr3-136698033-1	2.90560223454405	0	1.41424303851771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-39996345-1	2.9980740837517	0	1.33875334400157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20106365-1	7.2378455567378	1.27011456922146	0.638666998889951	1.98869609895142	0.04673475684728	0.353096244761517	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49893527903757	3.86705529831763
Merged-chr4-95916386-2	2.84246065308488	0	1.48038778333404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78521098-4	10.3702578220144	0	1.28638890560594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46110387-2	2.89249626259946	0	1.42383343735521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32404845-1	1.5897470971546	0	1.8857948251641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39490426-1	2.8641538003125	-2.34466535007101	1.33896122969857	-1.75110772296136	0.0799273561793398	0.524706953676426	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.94408359324351	0
Merged-chr4-56114102-4	8.45944281811462	0	1.30225688014862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108618361-1	2.14957321625978	0	1.39539835805922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91259975-1	2.46270388904153	0	1.39803114686009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103372795-2	3.67018590527837	0	1.31824383797809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75696615-4	12.9944106752823	0	1.28919220392688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117348866-1	1.69231501237539	0.446766118545887	1.30570253759469	0.342165313830899	0.732226487050345	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17162612421439	1.15307255889252
Merged-chr4-62265630-4	14.3070719068978	0	1.28417575720505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14303714-2	2.43632424920471	0	2.30938455718111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55792119-4	9.56401978935877	0	1.29434629874678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95685906-3	11.8178933866851	-0.307401198493675	0.440176070057397	-0.698359632438882	0.484952314808036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08321188837051	3.88333314561878
Merged-chr5-102010543-2	4.85990303646337	0	1.30579892197549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81083003-1	3.95183873368467	2.93662481350492	0.882854593925726	3.32628366404805	0.000880123102997261	0.0172244756778853	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03394117216057	2.97316282921634
Merged-chr11-35178767-5	25.1880057713709	1.16528104906223	0.495161365292584	2.35333596427435	0.0186058150140654	0.177258432411302	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12987758695398	3.30483543417642
Merged-chr4-107552972-4	13.1022761316003	-5.96045986305801	1.0669092755407	-5.58666045905104	2.31477670803324e-08	3.64485298224434e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81513588635622	0
Merged-chr1-37308847-4	8.52688588757968	0	1.28761056962718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62104778-4	13.0911959706435	0	1.28874767174691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100415434-3	9.31029405720112	-1.80849172398627	0.626681779218602	-2.88582145509519	0.00390393558933962	0.0540848238086932	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3350886730311	2.69949452834228
Merged-chr14-102907694-4	10.7739164993413	0	1.28549875285749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159225638-4	10.9839512516327	0	1.29067046480476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35810735-4	18.5505563542607	0	1.29170936579178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106153713-2	8.3078854412203	0	1.30638043866141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47769220-2	18.5362717683601	0.209761736832231	0.447252716091018	0.469000476208495	0.63906929563145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07767554820464	3.06092144068299
Merged-chr17-12171246-7	62.3795399104321	-1.3680860649401	0.387604362598251	-3.52959408343427	0.000416197692340856	0.00957635718440338	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85996464480676	3.31024472866438
Merged-chr15-59845365-11	46.9264270340453	-1.80967629946814	0.311140698600406	-5.81626353482056	6.01775687154086e-09	1.16342112582162e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88854159904642	4.08528992645403
Merged-chr16-10695170-3	6.36316414408288	0	1.34175686037505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164074842-3	8.37390109535416	0	1.29174178760875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139830849-3	8.80656782840073	0	1.28384246007929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46905199-8	41.1952624387229	0.329815940343351	0.314924551190131	1.04728557712298	0.294967886072483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13076333305336	5.33835988599116
Merged-chr1-131072611-5	36.044713600484	0.701106089341295	0.248509124568061	2.8212488799351	0.00478370740825756	0.0628839558036609	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46752324505309	6.11935515135936
Merged-chr11-90238848-4	14.5257921920733	0	1.30102821707811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70415612-4	15.2069299151819	1.0003183884534	0.652518915149339	1.53301056142481	0.125273252691789	0.731947958726543	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53706414285886	2.25531563498385
Merged-chr6-149174149-2	6.64510956931411	0	1.32482778519309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137956080-4	11.6710178195166	0	1.30028164543696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67263032-4	11.8243663984034	0	1.29277243720374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23125455-4	15.9396659567167	0	1.279189277814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46874250-4	16.8192452800593	0	1.2910612282245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13409959-4	20.3527033832311	0	1.29663682925106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21220908-4	14.1976478536548	0	1.29974238344878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35764170-8	39.6479784276635	0.495907463827562	0.29456718128147	1.68351226932407	0.0922759662362077	0.583328363129653	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03283872864814	5.47473487230853
Merged-chr5-108031492-4	8.41121986563433	0	1.28909412525442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85838732-4	10.4372590125708	0	1.290340024655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102233902-5	17.8790119593254	0	1.3152331698549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102873619-5	59.2036624483688	-3.40496284413835	0.531241200728415	-6.40944798609297	1.46047462829539e-10	4.84447589140053e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.93508177654528	3.50487228621753
Merged-chr16-75869480-4	9.01212831552552	0	1.29582715077669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149841117-4	9.7127549941038	-1.50093272392976	1.09779466406257	-1.36722537744473	0.17155467327515	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20208400767297	0.423054662900563
Merged-chr5-121249857-4	9.53606759751855	0	1.29018343927609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67700956-4	9.29806734221678	0	1.31492413244152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-139570251-4	15.4933063918358	0	1.29436440432691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98957937-4	24.3865595484288	0.928813717978781	0.687023128008119	1.35193952010274	0.176394663660765	0.930700310267293	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36936861789053	1.49705754145624
Merged-chr12-100013044-4	10.3026755649904	0	1.28632929583725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20740637-4	11.0021786445015	0	1.29486378984171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65747567-3	20.6991031397288	-3.37625507204719	0.474768392132234	-7.11137288833422	1.14894250472715e-12	7.6611017259082e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1507130401636	2.98149480288825
Merged-chr11-64496206-8	57.9036550342718	-0.641663283003309	0.270362438888334	-2.37334477985061	0.0176278004985551	0.169897677194482	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02439638365998	5.36728882692136
Merged-chr2-128870936-8	44.5600923829853	-0.287592379903279	0.275751623110149	-1.04293993507483	0.296976112379933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35973976869665	5.02477948791543
Merged-chr2-129514507-6	22.7583099383113	-0.990121853357934	0.376027105778881	-2.6331129807971	0.00846061981682407	0.0973529956946973	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51183027026875	3.59252346797052
Merged-chr8-26961887-4	11.564293007741	0	1.28769251293693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10877807-3	7.15474832720474	0	1.32178960320938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92964364-3	13.5264525042008	0	1.31281406180515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34296547-4	7.55961906871853	0	1.3017044218654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52571006-4	8.16345723387986	0	1.30351760667572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103308108-7	32.4494439563386	-0.16950271657055	0.295925974308242	-0.572787559344123	0.566788543488709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53380043082263	5.29084380193579
Merged-chr2-73037842-3	9.98115553368131	0	1.29670510053958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64527449-3	8.07745085796023	0	1.30128427363911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59395503-6	20.9725149528646	0	1.28910560035516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57525790-4	9.57283431380943	0	1.28512639903107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115343238-4	11.0113029795567	0	1.30732438413494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42372408-4	11.1482887679309	0	1.29632907101345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99903045-4	8.34834774668655	0	1.29198208773051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113423989-4	13.7246144642884	0	1.29198554535421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96631398-7	20.3021483168161	0	1.28193443860035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101074641-4	14.3890579969254	0	1.31707995221614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70329690-4	21.3971776644772	4.49429635176876	1.00138867748978	4.488063878488	7.18733801962445e-06	0.000387511378077871	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.85705179220891
Merged-chr3-61321808-4	11.7009639423379	0.0672740019567015	1.1328049346986	0.0593871017825331	0.952643786213942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.563523181795778
Merged-chr18-65524706-4	8.82527698232321	2.84264685914562	1.12942318663939	2.51690145268219	0.0118391938335783	0.126062238919506	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr8-57540374-4	8.79102493349716	0	1.28902082516187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47864691-4	7.62375800837911	0	1.293587526865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139176051-8	40.2794885125515	1.11476147890019	0.273675272013875	4.07329997590601	4.63516611238756e-05	0.00171317627138053	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58064163727886	5.47124838128253
Merged-chr2-165917387-4	10.1221227532174	0	1.29079672709816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34158417-8	42.3639497221855	0.551009614722525	0.235369949271899	2.3410363830516	0.0192302930119308	0.181908327614017	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01864599884819	5.60353263678288
Merged-chrX-19168818-2	4.57608326263997	0	1.31205985492381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5806529-8	58.7391811468689	-0.203553677428277	0.290457107792303	-0.700804600636015	0.48342496655035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33260607527288	5.06695071692803
Merged-chr3-10258524-3	8.53539633253943	0	1.40508005061007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121376059-4	10.5511059406487	0	1.29472890230799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84187228-2	3.60755243030802	0	1.38767749493227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101010774-4	11.7939960088836	0	1.28716488430778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97999359-4	19.6978310129984	0	1.31239203448559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144905263-4	12.4020912451699	0	1.29092376009614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82941981-1	4.13080808536467	-0.138556624825798	0.746295826780469	-0.185659117810605	0.852712090101999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23342626061175	1.88906532169278
Merged-chr16-85124059-4	16.7376237741994	0	1.29620444571635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67361007-1	4.25236788343132	0	1.33463281555397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39918927-4	9.58940093673523	0	1.31258408976789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132672670-1	3.7028751879214	0	1.33697721943321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87017207-4	12.8985687133867	0	1.28753538451136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101685323-7	42.7702433691685	-0.348343923802792	0.275159811006134	-1.26596948343967	0.205524007972294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57551465255835	5.21887190801761
Merged-chr9-44522155-4	10.271392039926	0	1.29513210287937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34878807-8	37.872653088788	-0.25277801725497	0.259142541331187	-0.975440064593319	0.329342018272365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30512849504029	4.98787005463794
Merged-chr12-98290676-4	11.4866404200783	0	1.28176367050725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69136056-4	11.871240895191	0	1.2905970376565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106135333-4	10.9537340235897	0	1.29535669607405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95495033-4	36.6305627280409	0.467368028764636	0.518366193525609	0.901617494740321	0.367260094320536	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49925381234129	1.90249028066537
Merged-chr13-21200668-4	8.59545990139654	0	1.2934166236286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51938090-7	48.7852026031052	0.213609050761403	0.25405091220997	0.840811980965678	0.400453274119962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03006688828736	5.24245885870594
Merged-chr2-156356196-3	15.608846060177	-1.72597948910871	0.980172424664577	-1.76089374244471	0.0782563892502537	0.517061881895559	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86676653006404	0.563523181795778
Merged-chr3-152478145-6	29.4091181191796	0	1.2819196499435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76024824-7	28.8932825767151	1.63924026611183	0.369590062018952	4.43529313844963	9.1947086478812e-06	0.000472728112749366	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25463688835481	5.96788573922445
Merged-chr10-19999909-4	10.6903795026416	0	1.29427957964549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117282774-4	7.71074870980195	0	1.2996769338573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55293569-4	10.5376436208277	0	1.29159440761974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-45092595-4	13.2426172481715	0	1.29464180033784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88586376-4	11.9778267786276	0	1.30142121401939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77526734-2	5.58344114109689	0	1.35113086553934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182512008-4	11.2737423222559	0	1.28454235912044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80231623-4	16.533250601433	0	1.2917226714906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75613321-4	11.4547809261215	0	1.29109448432181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25973289-9	109.90457561638	0.817813850233145	0.208844473103422	3.91589893704372	9.00679746058366e-05	0.00291096366073424	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65515453112577	6.52064948788184
Merged-chr18-56933005-4	14.0409510687878	0	1.29273588052796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122034510-3	8.03946478872743	0	1.29507691339937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67031409-4	9.59950170622315	0	1.29309675743148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24266606-8	82.3713495963889	-1.16907159067876	0.268886918920908	-4.34781876102586	1.37498150278263e-05	0.00065297631744792	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59104844261399	4.46632274381484
Merged-chr16-30252272-4	8.18994085931442	0	1.29178266352792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124671112-4	9.02189854258271	0	1.29530538227947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106320806-4	7.61693773223411	0	1.28791497985616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171044676-15	107.25117561353	0.723411914388838	0.143825556367871	5.02978700488059	4.91024993323507e-07	4.58378845910256e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70563224883222	7.39294711776901
Merged-chr13-97190573-4	10.3838225744705	0	1.29935300055562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82845896-4	16.5420361883245	0	1.28830558674126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-48331631-2	5.3711373566929	0	1.30731983183574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4325291-4	12.9280657430134	0	1.29181001052596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79813974-4	11.3737873710278	0	1.28819441850191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60815077-4	12.1718713086392	0	1.29912079773967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105528173-2	4.95083408115192	1.29930202034318	1.32750148694383	0.978757487748228	0.327699819693681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr19-53825081-2	8.1143886744758	0	1.335776745717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74201261-4	14.4876997128198	0	1.28608362895302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72161866-4	19.6116231158004	0	1.28046667444211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55467067-4	20.7960563189342	0	1.29367315885748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79319502-4	11.7970551752134	0	1.2950620645633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132121267-4	5.79064433429136	0	1.35053281822637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54802432-4	10.9485833009282	0	1.29750297411039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123058055-10	98.2536454104693	-0.511227861085121	0.262203921893262	-1.9497338460606	0.0512078500079541	0.377294866007416	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.3095180460944	5.63950871306518
Merged-chr16-87625318-10	109.384539514345	0.822041934439153	0.266105684636017	3.08915585761933	0.00200726106723868	0.0325233031737611	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20228367362564	6.17080330816161
Merged-chr16-30512166-8	33.7582132232051	-0.0986572823641381	0.227380538995369	-0.43388621911107	0.664371067507639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70524341450281	5.55502969127093
Merged-chr10-80848741-1	4.00251775654458	0	1.32781138603939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89216821-4	11.8547970657329	0	1.29370123709862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37729335-4	18.5704694792173	0	1.29536956607808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95361381-3	10.9324958419894	0	1.29333554629135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55252609-2	6.82596261436748	0	1.34935929214007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53249712-2	10.3075364548032	0	1.32386008525292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141646194-8	38.7881821978997	0.809296920015294	0.272446505910705	2.97048008492553	0.00297334683215393	0.0441582550213479	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7316758694967	5.46507950802655
Merged-chr1-172578247-4	19.3214069885844	-2.88658387066089	0.658478514944078	-4.38371762350672	1.16670984398748e-05	0.000573663065953393	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5209067265475	0.958904680953568
Merged-chr2-128420686-10	85.4155970688199	-0.355740029870354	0.289971297894129	-1.22681117908517	0.219893568140604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.58604813628444	6.22771779991531
Merged-chr12-51865975-8	71.2565802130019	1.96673880206376	0.238066218940383	8.26130986083447	1.44082520433813e-16	3.36257727866713e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34944040298051	6.25513437549988
Merged-chr2-131076991-4	15.4115073550398	-2.14820646514166	0.581481550093688	-3.6943673703758	0.000220434913491857	0.00589142734439219	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40882626132039	2.38835823208704
Merged-chr5-96222064-6	21.7414230484695	0	1.27940378215761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89458076-4	10.9025195111737	0	1.29317584926873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50657536-4	9.76241264253441	0	1.29094399929023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69538495-8	113.105315313417	-0.673408290035991	0.181423783799943	-3.71179718519465	0.000205792858044887	0.0055869298304118	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.70521547111519	7.01626667763731
Merged-chr10-19105195-3	13.4742395041799	0	1.31637387070787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152789682-4	11.0662845989736	0	1.30494276623592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152742591-8	36.1383430605883	0.454352379745175	0.388677052197505	1.16897145631921	0.242415131755812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29770257786614	5.73272444344118
Merged-chr16-75900102-1	1.53122902134311	0	1.73286043057065	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105964697-8	38.5164775377671	-0.810571272239546	0.30627085526937	-2.64658310868866	0.0081309522788531	0.094166285168324	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15765349320471	4.29273813549059
Merged-chrX-155194253-4	8.12652709346436	0	1.28790532870392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85437231-4	8.70332273910392	0	1.29067486801677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17811260-4	11.0721799356355	0	1.29157726267845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53045684-4	10.8885210725376	0	1.29684296141945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117890879-2	4.24010613102109	0	1.31937127538398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5856458-2	4.99168024562891	0	1.34008392282595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64877676-2	2.71917293187039	0	1.61336830349966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52565641-2	3.65496623004472	0	1.37572422863289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5303359-7	21.4384084929892	0	1.27981738759799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55928851-1	4.81930608722086	1.43307776876297	1.01716285692544	1.4088970699291	0.158865606093244	0.863591373077876	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.940478009647192	1.90896656829731
Merged-chr19-5946246-3	14.8166870478949	0	1.27853909812737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58898516-2	3.3512545275143	0	1.41835628964018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-18970595-1	3.78388897630791	-1.20842984760559	0.847639742975918	-1.42564085464304	0.153972037057641	0.845074477874062	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75562680454879	1.82361065065357
Merged-chr6-87920151-1	2.74856308070638	0	1.38719292255149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76402413-1	1.98607930535275	0	1.47463332272396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104986144-1	6.56684648195765	1.13486936386543	0.934065744695368	1.21497803587214	0.224374468634909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15739180407335	0.993458951033742
Merged-chr4-125145335-8	76.6999199277133	-0.124347963913447	0.24635471243408	-0.504751716274639	0.613733232396276	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3200702596977	5.17224585993801
Merged-chr13-110599800-4	7.50204017477713	0	1.30095569201456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13964663-4	11.8655485998596	0	1.30309344733351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23006461-4	10.2501653955074	0	1.28381193952779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76529858-4	13.4380392184052	0	1.28547340518974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70394549-6	59.6099490604254	2.15988992920818	0.367594498569118	5.87574062619456	4.20957000350535e-09	8.65026922795788e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2707799588541	5.40650587117757
Merged-chr3-54723978-4	13.7028746748216	0	1.28807920649461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64812744-4	14.9668567218138	0	1.28220724382231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170845857-4	8.97182747687067	0	1.28288868092841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91475901-4	28.4136354021159	1.15640284149631	0.325022561647661	3.55791559710215	0.000373809378764864	0.00879299771949922	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19251064541667	5.28937086098521
Merged-chr9-55310323-4	15.9235642088617	0	1.28497282533974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152283371-4	11.1531730593154	0	1.28590076285317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26637291-7	32.3424675850054	-1.0542466488621	0.407262315347719	-2.5886182176271	0.00963618645966376	0.107915379673211	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84581208135483	3.70208978115177
Merged-chr3-79120378-15	91.4018790346982	-0.793695587970254	0.291315195521914	-2.72452518842447	0.00643940183012396	0.0790808404418869	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.0878774003253	6.28036819405617
Merged-chr11-79652460-4	9.14255649179009	0	1.29463981827182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68134736-6	25.2898190946968	-1.31173932676132	0.396202323063816	-3.31078151338864	0.000930358187501447	0.018045469314476	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4067502917705	4.02643832661353
Merged-chr11-70804868-2	5.09750852266035	0	1.31955050701808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120959551-2	5.92034843465506	-1.61794229233472	0.985656471829485	-1.64148700746787	0.100696361905114	0.624002320061791	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38082067769119	0.73596151290311
Merged-chr6-88033696-4	8.43737852009794	0	1.28706351119138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67205101-4	23.0162592841672	0	1.27995015022545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184729417-4	12.6501461674991	0	1.28431988388112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120159005-8	26.1269945423741	-0.0895649000589472	0.287316825714607	-0.311728698227762	0.755246715939254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92063519700124	4.81191628731495
Merged-chr11-77520790-4	9.8753897810956	0	1.30103244266582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67341670-4	13.0735166003007	0	1.28539065515258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92861634-3	9.65657773803512	0	1.37522577359877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46179394-6	35.7912468571979	1.50651073875673	0.443138820834477	3.39963611384761	0.000674755861297833	0.0138961854750609	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53191084209537	3.94707627612327
Merged-chr15-6304003-4	14.9669718537364	0	1.28349228585998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71855319-4	9.49311654800421	0	1.30993460203629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69252926-4	20.774480025909	0	1.28313329429092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60259892-4	11.9116184003219	0	1.29570312203311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78257411-8	34.8593166241763	0.254996045244414	0.246938935703524	1.03262794309021	0.301778046242106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04089050594688	5.31168667604118
Merged-chr2-14252254-4	9.75416969998965	0	1.29224785226454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92870431-4	13.5325653992303	0	1.32428216899287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70882988-8	50.3908728766821	0.923223878657291	0.306258488669818	3.01452502644795	0.00257381975678764	0.0393977104303221	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82482940765759	5.75727401990846
Merged-chr18-5345067-4	15.8400226825704	0	1.27939671051579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65458437-4	25.6273091341306	0	1.30131012172073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33303657-4	10.3285231581095	0	1.28389332631181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53806616-1	3.03906005499239	0	1.47726085291636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-9965790-4	14.596599320456	0	1.28637149759875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149890109-3	6.46898321393607	0	1.31311185782501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54284499-4	21.3913193769183	4.69518493827487	0.959591971941177	4.8928972683847	9.93622785969867e-07	7.97162997163947e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.48211543439749
Merged-chr6-114364847-4	14.2518973638408	0	1.28151269042878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15034553-4	13.630894244528	0	1.28367701587099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154008783-4	17.4228818213093	0	1.2776673930306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64337035-8	50.7851400064863	1.23644754455956	0.367448759738332	3.36495228733405	0.000765568964102976	0.0154023613079658	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50160692434629	5.78215899742242
Merged-chr2-84999665-4	9.66779846562219	0	1.29114309866077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-126910897-8	26.5436813714186	0.475360913228416	0.352268432120577	1.3494280778066	0.177199507273532	0.933436437105699	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95591033783829	4.24709447736122
Merged-chr7-97077216-5	16.8589385616038	-2.4613565153309	0.907887734846802	-2.71108025899946	0.00670643910253382	0.0815328315524047	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02706140116472	0.683637474991079
Merged-chr10-81551726-4	11.9479968997301	0	1.28880817820993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154911442-8	100.76966059441	0.878451401559588	0.265914895925924	3.30350580211309	0.000954839934904262	0.0183893222476434	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55671560094548	5.29741954197946
Merged-chr11-74838385-9	122.275819024238	0.629777974544438	0.255764275268755	2.4623375328031	0.0138034694767715	0.14104793063786	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39474082074296	6.01532669273724
Merged-chr9-44721474-4	11.4134133248843	0	1.2843384795384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96181556-4	13.8029163141074	0	1.29534059742738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74491316-4	9.15675697983208	0	1.30044644342699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86442609-4	14.3893453812778	0	1.29415579792306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75592840-4	13.3287068103048	0	1.29798122463745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-126702190-4	10.2461787955573	0	1.312949851328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106815595-4	13.4697230708657	0	1.30100302247309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35187698-8	39.2092830612112	-1.12576826322338	0.332635948415946	-3.38438544776785	0.000713377794953377	0.0145312922035609	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39067516721115	4.18119363589914
Merged-chr10-8874569-16	107.601855019232	0.758803487431037	0.228288543027613	3.32387897074298	0.000887747138607618	0.0173425185409427	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0064406517454	6.75479398204581
Merged-chr2-154990487-5	35.7009087272064	0.0466158004254389	0.268205317675506	0.173806398879228	0.862017615360652	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47341223786148	6.39514933289241
Merged-chr2-158177198-4	15.0394583641184	0	1.28658893714523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191292625-2	3.26958013763416	0	1.52436566743481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125273876-6	38.8931653548509	0.295652868395612	0.734680595550791	0.402423679332323	0.68737224611085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2297835372523	1.41695929335733
Merged-chr15-97580917-2	8.86835904127485	0	1.31860652936618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94278829-4	7.55570781204028	0	1.29532754986842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114931240-4	12.8359698873279	0	1.29318917770222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31183083-4	21.9301936382395	0	1.27935929777443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8462020-4	11.770453693761	0	1.28283593608693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17455310-8	80.2165407088232	-1.57984708463821	0.25295055346307	-6.24567554017572	4.21972319889896e-10	1.22552014291223e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.73738047180098	6.1608236715825
Merged-chr8-84204047-19	253.682728654099	1.16819057639034	0.192718759744911	6.06163394750253	1.34745603216343e-09	3.29778508905435e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.57502166040993	7.75671873664898
Merged-chr6-81443393-4	14.5945405504697	0	1.29577722133893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128446291-4	10.1654627417553	0	1.28825843206165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131294219-8	59.1455043212796	-1.30307556684612	0.227635185301755	-5.72440312827192	1.03798013670827e-08	1.8282439356695e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.51257567910274	5.16441546785631
Merged-chr10-94771606-4	8.13037669748924	0	1.30109867074881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64400937-4	11.7705753497801	0	1.30001985078878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87527577-2	5.6812014089926	0	1.34739574592243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32795974-8	79.4800203556836	0.346693315835987	0.234376970780996	1.47921237603135	0.139083562889495	0.785935186836469	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71477301440705	6.07897712572115
Merged-chr7-73524581-4	10.5852043807399	0	1.28382310247521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14959611-2	4.69496249697696	0	1.31537134284533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39619949-4	18.3439368912754	0	1.29640790478893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96411121-5	10.443921747649	0	1.30291961506302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6571056-4	8.22656749078291	0	1.29407336240206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119352291-8	34.9121032504486	0.943441276338326	0.360490607340756	2.61710362801917	0.00886794145237819	0.101078754953272	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55357179600354	5.32329951600425
Merged-chr4-141016580-4	12.9734295429676	0	1.2926447383401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136578428-4	11.3898433762703	0	1.30164386437269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149235261-4	14.0328978161158	0	1.30523754927621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109062583-4	8.99345116607522	0	1.28673549179357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32491199-4	11.5050090805566	0	1.2873228337979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73361178-4	21.955219960389	0	1.29550386790709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53592486-10	89.8264368184864	-0.218265675280708	0.207950034448357	-1.04960634346474	0.293899139371291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2099136393577	5.98687931350738
Merged-chr5-24596784-5	11.8348269202784	0	1.28657859787729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32288676-5	18.6290636498102	0	1.2804261553632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32328329-1	4.36489322674906	0	1.32154957025744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8736180-4	14.5746055426923	-0.366146706273822	0.843080855879964	-0.434296074593768	0.664073453998327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32683770408583	1.15692263537643
Merged-chr13-44510845-1	4.17245661213097	-3.21428442432406	1.24036972175125	-2.59139220182342	0.00955884834658787	0.107201285915557	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67016851658939	0.306240821987646
Merged-chr9-44192935-3	6.31236498671345	2.8809361798888	1.11373963902683	2.58672321513682	0.00968933895555501	0.108399168531022	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.207189364431
Merged-chr9-59544478-3	8.11320331344548	0	1.297938310658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82863188-4	13.2801451523518	0	1.28125166730454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67114015-4	8.60060843913479	0	1.3200672567293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81046748-3	6.38358816963573	0	1.31969975253648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111526760-8	40.1114693073217	-0.532122945382	0.32694533140857	-1.62755939376614	0.103618345147441	0.638296039027593	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24508238080953	4.55923167803649
Merged-chr7-132339627-4	13.7108133078795	0	1.30089852775427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56659017-4	12.0558859953965	-0.0324412739391373	0.597996784160767	-0.0542499137092612	0.956736053815376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16204024772966	2.09296523225154
Merged-chr4-56222642-4	11.6485182351379	0	1.29712700026643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99469663-4	20.2824647158676	0	1.29596433542449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121722666-4	9.4004013120133	0	1.30380769690124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50377993-12	143.488561219682	0.248502735478779	0.201277483491762	1.23462759553504	0.216969133878189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30995894867658	6.48486919318445
Merged-chr13-5420022-1	4.65265238721856	0	1.3751739735246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81039505-4	9.33413035612462	0	1.2889398508374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-118127379-4	9.02567918735302	0	1.28465551598068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72844483-3	12.5570737814671	0	1.33050296973833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115640753-3	13.1821916192546	0	1.29087379944045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80922116-3	8.92302093931968	0	1.28649113819922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87944569-4	10.1799832309207	0	1.28859199603677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165583722-4	8.90639661755581	0	1.28962392704485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35724720-4	12.9715274549426	0	1.30473335008125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126771699-6	23.1808470181818	-2.39733316079487	0.425123206582762	-5.63914913059013	1.70892487056427e-08	2.80581418572595e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22531316255909	2.43491183200938
Merged-chr8-104176090-4	13.8967888728024	0	1.29937283504584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18767211-5	21.8149094693306	0	1.27801461363509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108756099-8	39.7657521801801	0.765574882512959	0.242162836064891	3.16140533763741	0.00157009842822856	0.0269008001811809	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3914612341233	6.13655852124923
Merged-chr11-8594742-4	13.6759324729877	0	1.29925294505149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96371164-4	10.2496520525058	0	1.29993563117982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40229941-4	10.2813163587707	0	1.28554260955713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83728575-4	14.1250562711531	0	1.28808956006853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112728880-4	9.93117582685632	0	1.2909019563457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59669032-4	10.6161063194013	0	1.28702214797799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107451295-4	19.0768308757614	0	1.29136048158674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31069701-4	13.667265135968	0	1.28426750148204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57761419-4	13.1203194248647	0	1.30034420318239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117327115-2	5.28049572091691	0	1.31301797828551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91703304-2	7.70812133053316	0	1.33156615365389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45142780-8	48.7166502648831	0.140052002931524	0.233420188483716	0.599999528066934	0.548506550019609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87183967480486	6.01313291160887
Merged-chr16-57301789-8	38.4038839320634	0.944079451270515	0.312336951953732	3.02263131328235	0.00250587336993945	0.0386291109299513	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76715003203148	5.6007293954713
Merged-chr4-55387001-8	39.2731248382907	-0.486454080297646	0.272110230908465	-1.78770963029789	0.0738228672067494	0.495381914201299	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38744034107405	4.92262151088568
Merged-chr11-46077898-8	28.7765153607336	0	1.2798266144726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21261802-4	8.04027092467365	0	1.28857110163873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95292187-4	9.13490600710476	1.31602496882169	1.29309889863136	1.01772955666005	0.308806496946562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr17-50071823-3	7.3794596600791	0	1.31296636156787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-36289350-4	11.1091049553989	0	1.28600253250125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25588758-4	20.8552455827952	0	1.290495081119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-23825147-4	22.0983988483786	0	1.28922421200206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118011909-4	11.9991639203994	3.80876719945397	0.827608643695932	4.60213559689854	4.18180794891063e-06	0.000251856610349782	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	3.59017879480329
Merged-chr17-5220660-4	7.12287512450905	0	1.29819388025965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24202882-4	12.0660696737228	0	1.2952695098943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27345689-4	13.6627133353682	0	1.30218230580228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90655028-8	43.6468011045033	1.28872051304291	0.283766691878955	4.54147914439737	5.58609127826982e-06	0.000316590390867146	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24519471370567	5.60322374695801
Merged-chr6-66849137-4	12.6542138763321	0	1.30699047909783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44582605-4	20.2762219737521	0.733862965953688	0.575753740570569	1.27461258910178	0.202446399366179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03617289855403	2.88854826306555
Merged-chr5-142932471-4	9.98402980508874	0	1.28457336409279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32765868-4	10.9573641768634	0.0916014799829224	0.70091163011422	0.130689057004226	0.896021289340382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01331322938043	1.76891977860032
Merged-chr13-49326461-4	8.33470249809761	0	1.30360941734568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136148616-5	26.2771009957254	0	1.2808429332908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21847277-4	21.731807168756	0	1.29160382158282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18876209-1	2.40604757488531	0	1.48276389083624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135323573-6	33.0562529352174	-3.52100090804784	0.556918861870864	-6.32228704953483	2.57720054745323e-10	7.98150459591843e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38943364849446	1.49176722630688
Merged-chrX-159802617-1	2.47083225013428	0	1.41403553296475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126695552-1	2.07840642556868	0	1.38703349660666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38106184-4	8.79538842957825	0	1.30358546600155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98793262-1	3.11106060345734	0.0913882194337152	0.859573910003902	0.106318047081374	0.915330013242984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75683787870436	1.90781241071831
Merged-chr12-117481116-7	112.083866949811	-1.28420182655721	0.373532530661483	-3.4379919314739	0.000586045160529537	0.0124498397464119	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63105730951366	2.98556206695392
Merged-chr4-137331899-1	3.32005941318789	0	1.38429003293223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152832513-2	7.90973919490092	0	1.31279950850754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90200431-2	4.40080152644	0	1.38372049646477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171750952-1	2.65390641437055	0.00355987766458971	1.19444068299088	0.00298037208149657	0.997622010651188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03122919606393	0.733321818366247
Merged-chr10-26798183-1	2.64600723450113	0	1.42178353722791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128957721-1	2.50415807115581	0	1.38746692525643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-30480655-4	10.8969137481243	0	1.28647843087145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91176326-5	43.2537729028058	-2.20109753620615	0.443066025667998	-4.96787704019422	6.76898590495912e-07	5.91345124258635e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94537016984225	2.46801699129062
Merged-chr3-152555284-4	14.0906947346178	0	1.30729435602801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21032000-9	207.258201019911	-0.92204903139151	0.128194632230924	-7.19257129058703	6.35823483351011e-13	4.56577157615991e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.01144483725119	7.07972982785875
Merged-chr1-165681488-6	35.0462928492229	0	1.27848719798236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112287249-5	22.2225264906294	0.386502581139949	0.512130082628286	0.754696109934398	0.45043134114521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65667869059036	2.47341853569617
Merged-chr11-103315545-4	17.2606169316521	0	1.29314345224468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64373854-4	16.1203785204458	0	1.2889726137774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66853426-4	11.2287686892461	0	1.28288052278549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135734331-4	7.13447615493321	0	1.30403113957183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56912901-2	4.73332450331692	0	1.313170488067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12466276-11	110.558393892184	0.0876654346220856	0.215933293392982	0.405983872355159	0.684754450424379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.19255808894641	7.28853006910702
Merged-chr11-53775978-4	16.4468265918066	0	1.29464003499213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126987429-2	4.83108607851047	0	1.32845412309801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25303710-6	35.5467940687986	-2.27813338633026	0.335933957906855	-6.78149181620373	1.18941216637172e-11	5.80024831520345e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.14948947072869	3.90447266582512
Merged-chr8-76897157-4	6.76353124525659	0	1.32141016025443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68759399-4	11.8055852987592	0	1.30173017007463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97511055-4	10.3878234545653	0	1.31827627837989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20373009-4	15.9433150952513	0	1.30107046563001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45448549-5	48.3783300469677	0.363423656865601	0.390108991721015	0.931595181291032	0.351545774363971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4134654040958	3.30915810202608
Merged-chrUn_JH584304-5805-1	3.8352930433752	0	2.43325228714992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125331154-8	44.2089079709465	-0.137940841762322	0.338264307558215	-0.40779011760968	0.683427769515111	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96074729682774	4.79633381393985
Merged-chr15-74926902-9	50.6172839926945	-1.00108278046523	0.239363730632191	-4.1822659507405	2.88618072610072e-05	0.00117573123628266	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02734284475569	5.00799603545677
Merged-chr12-12209441-3	18.2195842022487	-1.56546608624232	0.631444721709393	-2.47918152202528	0.0131684270443002	0.136220326324463	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76832994746254	1.89807913501705
Merged-chr15-57898148-3	5.64834807959002	0	1.31670892862667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109751893-8	73.8350927868804	-0.0805872131418863	0.222244266830918	-0.362606488306834	0.716898862738217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.07824998409228	6.99058480223414
Merged-chr17-29054068-4	14.1933021167096	0	1.30860116366975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185208018-4	10.1805558181817	0	1.29247687150268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117822062-4	13.3590359352094	0	1.28538465404775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73234181-2	7.85744448942178	0	1.32406934400161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191438644-4	37.9370560371173	0	1.28038347517438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70781272-14	126.500903918267	0.179708392378014	0.157892897556374	1.13816641001126	0.255051001799781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.69413413343218	6.845159779052
Merged-chr13-47265351-4	10.3060262172225	0	1.28666684750111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8212638-4	15.1484968055513	0	1.29364675008469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145825402-4	19.5941020836799	0	1.28969126546768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98554083-1	3.20599702231005	0	1.39060072904812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14836940-1	2.0022837456336	0	2.44274995045811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110002233-4	11.1389524607514	0	1.28807343966302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71942563-2	5.89206002690946	0	1.32002624998435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122377483-9	121.644999347025	0.700012788429697	0.192765930983225	3.63141341864302	0.000281873224550394	0.00710620668652395	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70129095639649	7.38136391024047
Merged-chr4-3692967-4	12.9250195661395	0	1.29504332210137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105745519-8	38.7675093881489	0.580887535402857	0.259251226254601	2.24063563283743	0.0250496866165796	0.223253794550875	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88184981771531	5.24217147293617
Merged-chr3-81057912-4	12.0930679385889	0	1.28956027687683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136499441-6	46.1098239751027	-2.32194475248063	0.404000965288533	-5.74737426882711	9.06399517491934e-09	1.62696518097095e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79457978950577	2.93113305247234
Merged-chr16-44243442-4	13.0626944646228	0	1.29583215567047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52637931-2	7.20865304675634	0	1.31278815418677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8634988-4	13.7301703605157	0	1.29140276350618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78373938-4	13.5290110684628	0	1.29066677660942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115718438-4	11.2533321240104	0	1.29368061770479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63253376-4	14.2923925915214	0	1.28730807855809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142938503-3	6.86940874694388	1.95450217619916	1.2235540395305	1.59739751008393	0.110177127141662	0.667328196204292	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.73596151290311
Merged-chr1-155384073-4	9.88614478516504	0	1.29245319490002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116625551-4	13.7710248790869	0	1.29886780645717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45417440-4	8.67101903451779	2.4727957978356	1.17994923421496	2.09567981920916	0.0361106032406496	0.293456470509077	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chrX-106633724-2	3.59814958325845	0	1.36299376582735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9666110-4	15.1801668628501	0	1.29517517015763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61344717-4	15.0419241698275	0	1.30950253641754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59544936-4	10.4077282371251	0	1.28811509402594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84222178-2	8.85826807634846	-5.48154925098496	1.1385699205876	-4.81441600719262	1.47630980011864e-06	0.000110758017290777	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06879971000561	0
Merged-chr18-9380880-2	6.18651687905956	0	1.32877024085078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84585173-3	11.9633076156033	3.78721866222494	1.06776764947085	3.54685653203836	0.00038985683297766	0.00910167367193932	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.93871841517079
Merged-chr7-116626208-2	3.86861975141091	0	1.35111811084956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9447417-4	14.9991130263403	0	1.29855691166194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36902015-4	12.4562737222364	0	1.30692181604841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156044403-2	11.1252827974971	-0.778592441432463	0.869175304031914	-0.895782977059683	0.370368683303964	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97024055521096	1.19380919831911
Merged-chr4-150488276-8	58.3949257219604	0.930121027889042	0.257522063677512	3.61181102157448	0.000304066120204906	0.00755494474939535	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85146427342102	5.7783940795077
Merged-chr16-55623619-4	14.7623534400545	0	1.28009620960411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3516904-3	9.13114356982399	0	1.29995972858038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12542271-3	7.42323393024846	0	1.31565219493343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8862141-4	12.7131799884249	0	1.31203579006494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39458971-4	11.8759179642796	0	1.30908441773644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57713029-4	8.25909421986366	0	1.31576640080357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41627809-6	31.2939377342484	-1.94532880309417	0.401853323876299	-4.84089265289489	1.29257185663976e-06	9.93698829929196e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59430254777602	2.90553399046049
Merged-chr4-119127433-8	46.71743246928	-0.552548581576126	0.285656089167651	-1.93431403190512	0.0530745290338172	0.386990423370209	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36298120934087	4.91765789525436
Merged-chr16-22683791-4	10.5495445150796	0	1.29109144802058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26356395-8	31.516827588818	-0.539949248046395	0.38570715299502	-1.39989430803573	0.161544970789099	0.873795022033315	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20027198446309	4.52639890346519
Merged-chr2-51372954-4	10.4304497597828	0	1.29890947994416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12824749-4	24.3467146623309	0	1.29483565759919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90216722-4	11.7662307694091	0	1.29695715094453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101146543-4	11.356524077622	0	1.28556374599341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30407387-4	10.3999067288377	0	1.2942181778539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16502111-2	5.93998648917923	0	1.31431909133829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91235593-4	11.5449803875908	0	1.28919502288213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96637371-4	8.75278271527731	0	1.30077541541244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62590368-4	9.05519542344365	0	1.29173625962126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34888706-2	6.60368637227584	0	1.30500367984689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65768622-12	82.1194186091466	0.153548785318969	0.230402227557759	0.666437937456469	0.505131220414861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.3628040219839	6.52701821471644
Merged-chr7-100946596-6	47.2343167096801	-4.41931102719485	0.533677178246064	-8.28086942319505	1.22279211937437e-16	2.95942866046806e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.49353990633564	1.47711801254374
Merged-chr12-32501279-2	8.63597139620068	-2.00950760999564	0.927901364110993	-2.165647867024	0.0303381056298998	0.258774814057099	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76563944214592	0.73596151290311
Merged-chr6-31208431-4	13.6324619231427	0	1.2948479990595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110385669-4	7.70511033759091	0	1.29642478609571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-44091710-2	10.6405340977292	0	1.33017405041575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84110198-4	14.4183853504344	0	1.30167142447322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131427152-4	10.8193004105314	0	1.3135588781455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10983823-8	35.4121022117738	0.0562324534525588	0.294238133683495	0.191112051822102	0.848437805675969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9041194650521	4.86475089989128
Merged-chr9-67845273-8	48.4317176567408	0.40464197783037	0.258148969830457	1.56747469531304	0.117003776479536	0.697284886259166	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28674741708375	5.68301288075505
Merged-chr1-180365652-2	7.84421117468781	0	1.29173354000326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108001125-4	8.8018274477278	0	1.29133079820908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-26253577-4	12.158756963969	0	1.29309825719927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77547078-4	16.5601395001338	1.92970785812531	1.25224680613352	1.54099643031516	0.123317654777014	0.723367636360752	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr13-36315038-4	18.0738444515374	0	1.29801006273179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99599561-1	1.847128141756	0	1.47823919548623	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132335204-4	9.16860700458379	0	1.33689433468364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8816902-4	14.1344177906806	0	1.30624567293437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21946645-8	75.9997169799009	-1.68637968181169	0.252988136729974	-6.66584490327957	2.63147042853405e-11	1.16186531502017e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.81211409698349	4.98209259841195
Merged-chr11-76589272-5	28.0642462758916	-4.23765868311806	0.809212745422631	-5.23676710122113	1.6341368699922e-07	1.8668585298341e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86770403745804	0.918668513615376
Merged-chr9-121286030-9	31.2948978471519	0.0543308263302954	0.324449483709713	0.167455425445847	0.867011717576239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34356248482254	4.42372297950969
Merged-chr5-127611331-4	11.0558199967955	0	1.28522308952108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43755622-2	6.32924293985469	0	1.30947801672361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91027134-4	10.0524458794253	0	1.3022393044822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22026641-2	7.18723038477502	0	1.3409401697069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39055292-4	18.5461062969413	0	1.29026891681856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58537915-4	9.99954737040324	0	1.29449902175563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17522318-4	24.4549584907006	0	1.28312352067893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57910698-4	11.4117323409184	0	1.28320659642112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98672722-2	5.48287619987948	0	1.29685408191884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91478318-4	13.0351116421645	0	1.2880043036022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154264665-3	13.2723233257748	0	1.29146750261579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124026612-4	10.7653336222184	0	1.30400347849236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100053804-4	8.55821171642575	0	1.31007044460213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88981747-11	100.616707672626	-0.316490945815497	0.224718848726687	-1.4083862907309	0.159016716443397	0.863981570858088	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17849477048383	5.86432181768719
Merged-chr12-33041003-8	27.3773420540201	-0.876703050103462	0.35115290112681	-2.49664191094598	0.0125375491588891	0.13154763765844	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95243871481539	3.91884181450402
Merged-chr9-44089050-4	17.4033218554909	0	1.28067832347123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194879867-6	21.1921957660157	0	1.27741690599331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28777963-2	10.9792420253911	0	1.29228680071974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123818816-2	7.87029513141238	0	1.31440941701806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73035408-8	51.1327957310944	-0.409191083100831	0.284271069129988	-1.43943977258453	0.150025962511926	0.829197183144816	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87484602677266	5.37363086252492
Merged-chr7-46607890-4	12.5234517322538	0	1.29069852410523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88465250-4	12.0192686728231	0	1.29239290100275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64703992-4	16.8803952704231	-6.38577610924996	1.0354618741853	-6.16707989782265	6.95626138661018e-10	1.8706331546067e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1448485945309	0
Merged-chr1-105967118-3	26.2024430054901	-1.41042136094851	0.280200265554301	-5.03361893022612	4.81305980181532e-07	4.55158040245187e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.62359611425769	5.15441637635639
Merged-chr1-151584825-6	21.102080286129	0	1.2790576421877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83040145-5	12.8402587044542	0	1.28099174187654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91743226-4	7.83939471082744	0	1.29917042832688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139235748-6	50.3625546616587	-1.8899375122884	0.332027264600641	-5.69211541877923	1.25474984914915e-08	2.16340062381267e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.81216707915041	4.84331670053856
Merged-chr1-75188120-4	9.87055941302983	0	1.29152698021501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115678355-4	9.40443800038503	0	1.30019397034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31192037-4	12.0206426092958	0	1.28799823680805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180268803-4	8.02815622621279	0	1.29333231582963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84245481-4	8.96179044148074	0	1.29554782159355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99979718-4	21.1240443648685	0	1.29445850772447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99211195-4	13.8902810874358	0	1.29677495777608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11367429-1	2.69782861288066	0	1.40701339020331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138211587-2	13.8362987451798	-2.34903697054142	0.735566272032011	-3.19350826683797	0.00140555313114689	0.0246834923160239	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36849872903987	2.23948114767965
Merged-chr4-133910445-3	21.0965151798414	0.725781410119733	0.43092395417495	1.68424475615267	0.0921343769345901	0.582602380023972	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64893717422889	4.07025374527102
Merged-chr4-150673031-2	5.00727055444335	0	1.31669604184041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61167564-4	14.5835489647036	0	1.28738161574447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41571253-4	11.8401094702443	0	1.29729608888695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16168609-4	9.82769074315186	0	1.30127378528025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35710544-4	21.1777735833295	0	1.29053045377883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81401343-4	14.87516562614	0	1.28174481792516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119875864-4	15.9507648054726	0	1.28953832543965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48337022-4	8.60780330863786	0	1.29222226353921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68795791-1	2.91581330128852	0	1.41746219021933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88851278-1	1.99769212702582	0	1.42656794640235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-81076577-3	5.20272526554108	0	1.32796904537638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57392172-2	2.85966664754709	0	1.62152411356496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12327351-1	2.48965935318331	0	1.36131669941243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36317279-1	6.47637580251323	1.72841736779215	0.660702949174759	2.61602792896717	0.00889592807696696	0.101344720383104	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.894439563588	3.12283661469433
Merged-chr14-70994624-6	26.9112203567701	-3.75685539062397	0.705824528652324	-5.32264782267793	1.02267618496682e-07	1.26567799209928e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75358890275609	1.03295826569721
Merged-chr17-28013396-8	29.751486968797	-0.1736546949332	0.30842688233497	-0.563033590387886	0.573412010998362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72384708292453	4.43444330524693
Merged-chr11-16969865-8	46.1563461560227	0.547929459070001	0.30424035491519	1.8009756109532	0.0717067241556707	0.484465218845787	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75874080546043	5.29128639751343
Merged-chr10-118588177-3	8.77255639722772	0	1.29684219058503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12382807-4	12.9402115850226	0	1.30249721759561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29219274-4	16.9224175440101	-1.02393024590786	0.387904091393239	-2.63964796615112	0.00829921854751436	0.0957825388918886	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60680208423035	3.46701791671767
Merged-chr10-67566358-4	11.5169876704075	0	1.28852438401952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81610494-4	6.52713052927153	0	1.3280460888513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8911757-4	22.2148935419984	0	1.28243822481848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66796934-8	50.6189928229313	1.01962566749536	0.228993326547051	4.45264358953213	8.48194814935581e-06	0.000444119698531895	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70574083938087	5.68955566614679
Merged-chr10-75146813-4	10.0416816912366	0	1.28431500682136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58116520-4	7.26340606108901	1.95159304572491	1.25536439239765	1.55460283686836	0.120040687734544	0.710845381123837	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr5-64602097-4	11.4299423108536	3.54840393303979	0.761522516903795	4.65961787639179	3.167969381169e-06	0.000202162233576045	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	3.72355394136653
Merged-chr7-67425664-12	98.7516698457665	-0.0221929061925309	0.173040291179557	-0.128252825057387	0.897948896853636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5619039381075	6.49846934923053
Merged-chr6-134615475-4	12.3411939376668	0.437291448435112	0.661425204965153	0.661135144461497	0.508525648768402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08448424706763	2.52139425992504
Merged-chr15-87074790-8	28.3042672783547	0.112001587350104	0.360001519552179	0.311114207210647	0.755713800952932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60887727899788	4.56547357561537
Merged-chr16-44991132-4	17.3135152727956	0	1.28711576249559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55572321-4	13.6875667949709	0	1.28333308937075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65196693-6	25.3220072885297	0	1.28245057119704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90198691-4	14.5986410291739	0	1.30845185639833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77850388-19	177.473715165614	-0.330190204221245	0.145913898813629	-2.26291125729555	0.0236411603109919	0.213460566676236	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.71781195458962	7.36989108743793
Merged-chr7-97336836-8	58.2031252320091	-0.484634152360933	0.209983252698797	-2.30796573599181	0.0210010423091315	0.194546939429048	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45627359071218	5.91805164904103
Merged-chr1-153754208-7	25.3707727274839	0	1.2771939571396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141165016-4	13.293078153313	0	1.29823651827825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102683927-4	9.83573234285484	0	1.28905596105343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89095677-4	20.7589839052974	-2.3575139923632	0.492991250182087	-4.78206051627173	1.73507423959808e-06	0.000125838136804413	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12958909628504	2.34574658350842
Merged-chr4-40287629-4	10.338465500385	0	1.29258832145231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160068119-4	15.5049943387605	0	1.29203667763293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163587661-4	11.1504340421212	0	1.2856635781632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-67478696-2	3.51235195319787	0	1.4306038588114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78197647-4	8.44179819502771	0	1.28811613687723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138283032-8	36.9081042363299	-0.132984596583789	0.285291985148916	-0.466135059890917	0.641118829164357	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38182668991239	5.20642715389979
Merged-chr1-181881753-4	12.6777951236968	0	1.2890637329045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115063270-1	5.04100420543865	0	1.32117968722971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75086399-4	28.8803934996597	0	1.37759603870329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5870077-4	8.58319509270969	0	1.29569353011885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32339972-4	6.9268460611086	0	1.32031452033237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-5311945-3	15.505562922967	0	1.30710547530651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146125051-6	29.0913613767913	0	1.30062558944118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97962015-2	4.78895068018531	0	1.32715735544047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134595024-8	53.924526966619	1.4769157919954	0.238077220780842	6.20351576329495	5.5215506814394e-10	1.56874456882321e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26704299938657	6.83183582496643
Merged-chr13-5716959-3	8.7213988258488	0	1.29890907223749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145274277-12	90.6773278068415	-0.223077764095383	0.181310084087666	-1.23036600649041	0.218560076944344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17023231727924	5.93346103085155
Merged-chr12-12223485-5	48.9524968487054	2.26497001020222	0.500907498713661	4.52173308648544	6.13353706295135e-06	0.000341734295568607	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52972125819363	3.93819784929114
Merged-chr6-8420288-4	12.7793250111408	0	1.30964126963029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10372527-4	10.1990069318688	0	1.29639821058473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72712791-4	10.1943817313008	0	1.30242474863353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20379804-4	9.65782258026607	0	1.28850573089874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40978831-4	10.7999901742062	0	1.28442354620677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52094798-4	17.8410016235596	0	1.29371573316945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55892476-4	12.0711629889642	0	1.3096422374348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79525234-4	9.19961785952424	0	1.32913957576569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46169034-3	13.1906449845021	0	1.31719113750127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10876008-3	5.97151074327274	0	1.33604298290847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136035402-12	59.0927979527906	-0.206780127908597	0.196987302814985	-1.04971297618512	0.293850095935182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10443060717843	5.89963007234361
Merged-chr17-29398319-8	47.920320022368	-1.20976360964785	0.26377734334175	-4.58630598944384	4.51157247785347e-06	0.000266780195414627	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03704926322741	4.79200792560005
Merged-chr2-128334300-6	23.1672963202079	-1.33135255039591	0.368959152421804	-3.60840093451284	0.000308090114409097	0.00763171213653406	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79668460206038	2.9392982047584
Merged-chr4-102515188-7	34.1352662435251	0.0513473161066823	1.10478497568933	0.0464772034708783	0.962929903442188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94895536770463	3.47614437676521
Merged-chr9-105759060-4	16.9340968163653	-0.561879357296409	0.403240874052977	-1.39340873768315	0.163496224976201	0.880809930658733	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31918546773541	4.71513272595673
Merged-chrX-167333582-2	2.53182691432136	0	1.41776932749099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58467812-2	3.36675298506782	0	1.40704523950934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92061833-4	9.67384914111309	0	1.29828200649066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58989524-3	9.71033704429999	0	1.29550739201063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67629102-3	10.7653916842521	0	1.30577912027979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166744661-4	8.06028008679568	0	1.30280879169641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151689218-4	16.2709540392917	0	1.29594956332897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75164927-4	10.325311122534	0	1.29010651867543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118913253-8	40.5105764381063	-0.991605368591707	0.252244043990245	-3.9311349156377	8.45458081805171e-05	0.00276513032100304	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.21196881288264	5.18419768100403
Merged-chr1-92742529-4	14.622852208602	0	1.28809123267851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99045085-4	10.6110332597577	0	1.29482106701625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4767053-8	32.6866819286457	-0.884654396117318	0.299453897352774	-2.95422568862126	0.00313454679864401	0.0458577589023255	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66859489481764	4.80880154696192
Merged-chr2-129387846-12	82.1520786276039	0.407005609234046	0.227595068584377	1.78828834809817	0.0737294987605988	0.494965899359804	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23630580784888	6.57594285842545
Merged-chr9-35421479-3	13.1433770053184	0	1.28266270819088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58506992-4	10.2177507325785	0	1.29383854768059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70860794-8	60.1370546413085	0.128627468789613	0.262940493896229	0.489188511376175	0.624708242379386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.93845187040582	7.08190342108758
Merged-chr17-27790219-8	36.3511352357001	-0.2429861585479	0.304101103462538	-0.799030834749448	0.42427253278922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64847686651998	5.39120331303952
Merged-chr2-30441227-4	6.78263399959096	0	1.2908109812822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13851479-4	9.53884205082205	0	1.29873238682438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7113064-4	7.42415494601177	0	1.30762416699726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180357922-4	17.6374842891518	0	1.30724972137245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40958777-4	12.3501289565641	0	1.28984924593042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-96208582-4	14.6374284777723	0	1.29057931679425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71924252-4	18.4935498157143	-1.88299114747252	0.875664999785765	-2.15035561308628	0.0315270965086071	0.266034303777304	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14975948054316	0.851599296279844
Merged-chr6-82797580-4	14.9259094355176	0	1.28088550518969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98946709-6	30.5981843844416	-2.44145969487342	0.458004731003197	-5.33064295979156	9.7865657844443e-08	1.21349701660398e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.249799109169	2.71204808382565
Merged-chr3-52196469-4	12.025972034764	0	1.28067976875496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112840388-4	12.346123993868	0	1.30247886967809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55654983-4	13.2712517365402	0	1.28918469562805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113854748-2	5.99523475283086	-1.22669134921958	1.21712295510119	-1.00786148521666	0.313520963666317	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	0
Merged-chr7-43985830-2	6.80925639950222	0	1.31538082195966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43553301-3	12.3615738295787	0	1.28054649238847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19418820-4	19.0251834305921	0	1.32334067978768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83430773-4	11.5541667902417	0	1.28879565554896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43460839-3	10.5269409149346	0	1.28445355275858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182368958-3	7.78057788946498	0	1.3126593873851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58568506-4	11.0999221526367	0	1.29624437676368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19840346-3	6.37534502333897	-1.70014278821228	0.956524749950609	-1.77741641112796	0.0754997526067887	0.503634833997878	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06287182526078	0.843323834477631
Merged-chr8-84198657-8	111.04038569797	1.46796778415051	0.296117334361984	4.95738551514858	7.1448117483747e-07	6.11906773930922e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29508155858585	5.66182155981717
Merged-chr1-143988911-4	13.2776964193079	0	1.28845127541858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5454378-4	17.8890826988127	0	1.28111411786528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124319724-4	7.6542242977837	0	1.30144986640548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73041908-4	15.7415618701171	0	1.2936188921674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56114033-4	8.8414230787101	0	1.29194874049302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89296572-4	11.346082811596	0	1.29818445901366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33156949-4	12.9874064060603	0	1.29363733625341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81132852-4	20.4468393382015	0	1.2791745093145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106099338-4	11.1367179501602	0	1.31041814255093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99122654-7	28.3883058639344	2.34287533154244	0.61217858259553	3.82711090873036	0.0001296561043889	0.00389361571571556	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06431697904413	3.12488039271991
Merged-chr19-40693409-9	50.4600628945347	0.542983289306374	0.247639842289222	2.19263299591435	0.0283338318263402	0.245102273566856	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31743973334873	5.96028980906037
Merged-chr15-84466624-4	7.82498989854041	0	1.29844704604699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73611025-5	28.257962234073	-3.17243255887117	0.716609977463546	-4.42700026323949	9.55526158829867e-06	0.000487860723021989	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21621077889095	1.10459859746439
Merged-chr7-35051721-2	9.08268691043494	0	1.3219646338279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118380671-7	24.5881987778151	0	1.27946408689664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78356183-3	14.9463439076829	0	1.28724200128647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88867524-4	10.104552718901	0	1.2882144752803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74788036-4	7.74878769817257	0	1.2887458893555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69189080-4	9.66254138650518	0	1.29147379708403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166360368-4	9.42257388903933	0	1.28791158879929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91498777-8	34.2870020494434	-0.17851229627618	0.250890187634318	-0.711515655352646	0.476764753011981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58869273679772	5.40582447277592
Merged-chr12-102297701-4	13.1387774133022	-3.71886769697036	0.743323053739557	-5.00303021446898	5.64360912780018e-07	5.12204558423931e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89088619220494	0.735627456805112
Merged-chr9-61025564-4	16.1167391091308	0	1.28655556373853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136965066-16	96.5383478584561	-1.0942216878902	0.193207966806695	-5.66343979482466	1.48368242137252e-08	2.5046189799796e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.34034596647075	6.29066078032793
Merged-chr7-111383878-3	12.8212646565627	0	1.28848420316647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42564099-6	31.9660861171804	-0.574006329586911	0.435885799113991	-1.31687320567376	0.187881129232256	0.974619375312454	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79054519421098	3.43285906107659
Merged-chr7-139220519-8	45.7277960122658	-0.633895234163001	0.286881526439269	-2.20960632087683	0.0271324962515449	0.237032098937627	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82855819474278	5.05063785370404
Merged-chr10-14130338-4	14.4630906916999	0	1.28973463028872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105798567-6	41.5395843430024	-2.48241870827485	0.44480912618883	-5.58086280635575	2.39328370853645e-08	3.75039609635546e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44753400185604	2.95087636052832
Merged-chr11-102434578-8	30.55694345415	-0.727458110749043	0.307467280768153	-2.36596918192927	0.0179829412724114	0.172582358699808	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45108153750344	4.38656837931857
Merged-chr12-81669781-1	2.61011897805011	0	1.36328120716198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12955761-4	12.9124177201527	0	1.29206819197759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67102854-5	12.4637831506832	0	1.30823672677885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-18227-1	4.44104203576928	0	1.55531406786927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102404444-1	7.06772970341278	1.5811061979689	0.704459617402259	2.24442417835011	0.0248051223012335	0.221497065030938	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02369524037755	3.06245009089352
Merged-chr9-32020063-1	1.54353901106456	0	1.5112073299476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118504631-1	1.19006354489505	0	1.67080879911474	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81986746-1	7.53485859388335	2.04832121323386	0.71164045749032	2.87830911196013	0.00399813165139638	0.054965866595271	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29426787717726	3.44975065122858
Merged-chr19-45964008-1	2.12838677493877	0	1.43375750025421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3282670-4	13.0036440253798	0	1.29806470501177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60185569-1	1.63717349338604	0	1.91166272519969	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17276125-5	96.6599725547802	1.35545676444037	0.396141131983865	3.42165116167634	0.000622421151048403	0.0130473858764345	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67639437090755	3.99813062760014
Merged-chr10-8953170-1	4.6215463723551	2.21974501461214	1.03157487473608	2.15180213184239	0.0314129418827324	0.265521846185207	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	2.2547128493771
Merged-chr17-37524798-8	36.7743800520848	0.550006274787937	0.247039954584628	2.22638591280798	0.0259883432547178	0.229243288110528	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76554197809933	5.32560479666409
Merged-chr1-95339794-4	12.4259481326808	0	1.3073689506345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120927422-4	10.1426418153806	0	1.30436914505372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84370537-8	29.8384138773948	-0.216073088985969	0.296455192597255	-0.728855808167649	0.466089869390449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33458969338905	5.08794236848704
Merged-chr15-97949830-5	12.742223121352	0	1.28825420418383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125422381-5	17.6500997069853	0	1.27990443280393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73441751-4	20.535036534458	-0.232184376028785	0.284620375945173	-0.81576863658388	0.414632474438708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06521218598867	4.82846808787622
Merged-chr17-72939693-4	9.66528657440806	0	1.28676920734171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80832403-4	15.8856783521513	0	1.28413208411203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44169281-4	8.19009319481122	0	1.32144577171281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126489923-4	8.94102865909785	0	1.30290233325569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45229520-4	7.92774182227224	0	1.32759340633022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35556324-6	52.0314977887752	-1.40518841896466	0.479303961488556	-2.93172711237483	0.00337082796533577	0.0484110163127101	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76060029907595	2.575641413063
Merged-chr10-26762689-4	10.8809520517076	0	1.28740980130867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84685681-2	9.42896926272882	1.54398184559362	0.586052330943864	2.63454603637011	0.0084249878056823	0.0970455232064368	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70533450762756	3.43335120402952
Merged-chr17-55722377-6	17.1884895798785	0	1.28812700468999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148069926-3	11.0848984492074	0	1.310144296886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92715654-4	9.53975095020585	0	1.29310987623087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107259345-1	4.26628299038661	0	1.34246960058675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35269701-8	34.0026626073655	-0.00405527349003648	0.249308928175016	-0.0162660580177444	0.98702213573564	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32893929694358	5.33714558568624
Merged-chr18-65495976-8	134.910664870404	-0.27518523108351	0.314340574655988	-0.8754365591673	0.381336414867825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.79449927925356	7.47433590606411
Merged-chr5-31602593-4	12.5134732355618	0	1.29669999228227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29263779-3	8.26237307628381	0	1.30298984048442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135267105-4	12.9386390705316	0	1.29273214419938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5777567-4	12.1904711600107	0	1.29131337279406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32635274-8	45.4631349488837	0.924718669167677	0.227839170055903	4.05864658364401	4.93579470025443e-05	0.0018018437393986	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57303140968124	6.46695834681224
Merged-chr12-32735449-4	11.1046393158798	0	1.29255742001231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113913755-6	21.9293678557823	0	1.31345989492863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13214097-4	9.89401275540174	0	1.29403132253921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34526938-4	16.0226403098885	0	1.28454674061379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75181721-4	12.7463992518972	0	1.28846023015689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59184286-4	10.2661858573087	0	1.29650779763894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108477801-3	7.20198557239175	0	1.32144533469941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95632466-4	10.2970125290863	0	1.29741367063237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8451241-4	8.20828532973127	0	1.29277636684639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46868385-4	9.28466239031276	0	1.29072376428826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80814047-4	9.43418394930809	0	1.29854059872096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107903687-8	67.0438680016309	0.0980114051048976	0.284949076742749	0.343961125353574	0.730875521763787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92294648337314	4.99331308267655
Merged-chr18-76162138-1	6.93099783534877	-3.15219249215664	1.04902569622801	-3.00487633762548	0.0026568884686935	0.040489047079115	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69129019645823	0.420961122473315
Merged-chr9-107644750-4	13.2500487631044	0	1.2861866812876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17982874-4	11.3909896755259	0	1.30761943980753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60960742-4	11.9895235380155	0	1.28570946565762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76356122-4	10.7180594755472	0	1.2960992719367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21632691-4	12.0471706429594	0	1.2814968663369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95293287-5	13.3845488420846	0	1.28791277113135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145218067-4	16.6987285273973	0	1.32150161063098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23597932-4	8.26494174737494	0	1.29228712973445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27691643-4	8.62486621225551	0	1.29108120838647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39777363-5	19.4332337903932	0	1.29338179907498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49784450-2	2.43898885300556	0	1.45441568325562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149160649-2	2.7196263678753	0	1.41020388801284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16131762-2	4.03154301480602	0	1.40621622875594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102009870-2	10.2877550839975	1.79236895927769	0.570789490037556	3.14015760724635	0.00168856963997653	0.0284091842672261	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81732944728029	3.75604983780945
Merged-chr2-27764204-2	7.41866292298631	0	1.31332772084046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93889863-2	10.1784986924355	0	1.29470406504551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24781329-2	3.38276347941009	0	1.35242632088143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45083224-4	9.24154313852238	0	1.29687105762028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128380824-2	3.43791098304071	0	1.37964639847952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28444493-2	5.1377414370183	0	1.36348317549639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149340935-4	10.9129711946371	0	1.28197618613408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65655194-8	41.2370517737769	0.339562489519009	0.252872620943967	1.34282030316858	0.179330167480056	0.941623874982061	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.73705025926006	6.09023837851626
Merged-chr19-7307234-2	3.0234507480701	0	1.43178339245671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12871296-1	4.80969297304255	2.53128978392049	1.08839743252186	2.32570356037629	0.020034370428889	0.187532727409566	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.75485430327507
Merged-chr2-117019731-2	6.01151094090657	0.107295697979549	0.901295721291418	0.11904605274927	0.905238870356767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60403683746253	1.28032775213398
Merged-chr7-128411148-4	12.0886611932244	0	1.29122001997534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35430729-8	73.4479345688768	-0.621231183221029	0.22403152352082	-2.77296325739309	0.00555483922435242	0.0706474355691969	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.08272082885516	6.41028369944647
Merged-chr6-50378667-4	9.58762076190731	0	1.29028825642595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191910802-4	10.0343134615119	0	1.31305005560113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193170064-2	6.63532744109631	0	1.32021697579835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98868733-3	11.5767829130674	-0.714025703627369	0.396217733879674	-1.80210435468345	0.0715289887140158	0.483664455350381	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64032586507054	3.96194241223882
Merged-chr1-128712882-11	100.415265076177	0.605486762029778	0.206936354908562	2.9259564482873	0.00343399007059923	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59254987118623	6.19737585783168
Merged-chr11-96967777-4	9.77248956774746	0	1.28741082965037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34672141-4	9.16517029170213	0	1.29183760562231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139422644-4	9.76723345183995	-4.25842670386406	0.971917421429808	-4.38146967012835	1.1788145536115e-05	0.000578289862395019	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27664401311637	0.609949614787909
Merged-chr9-94362746-4	18.0370165246251	0	1.29385847053956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93457870-7	50.3698369688692	0.0466776581650349	0.319052185119994	0.146301013884232	0.883683765506858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76884174229336	4.75774761217898
Merged-chr8-46896848-2	4.53623978377516	0	1.37730539281473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45041391-2	7.6965411110792	0	1.35966229159741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77836299-3	7.34076319730312	0	1.30468183382518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71133266-3	9.55171226185299	0	1.29205671843029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75342912-6	29.8385109167614	0	1.2800740877812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42574356-4	12.2298327138939	0	1.29322306553275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40503384-3	4.31310683715432	0	1.3878969310691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62500408-4	12.1532643310931	0	1.29629567576446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93007315-7	65.4669394039223	-0.979947207722274	0.244523481842615	-4.00757915083594	6.13443060263699e-05	0.0021528490986032	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84008950774042	4.85931770887298
Merged-chr9-107629324-8	51.4340039818916	-1.14736081549867	0.309519791416284	-3.70690614079519	0.00020980665483456	0.00567805850031465	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29988086345368	4.14975877341639
Merged-chr14-70886017-4	13.6404270324618	-3.77652805175637	0.750690660530926	-5.03073802608044	4.88595383423843e-07	4.58073944407668e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0197049980966	1.14490468848716
Merged-chr8-72295939-8	102.995923090631	1.71389670926677	0.27774350779054	6.17078945571359	6.79498557686614e-10	1.85010469794123e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06001587371631	5.79402400659821
Merged-chr16-92676661-4	8.57582561029175	0	1.30809647107121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28430992-4	9.94977222641604	0	1.29864602773723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169863022-4	10.6648563231015	0	1.29080430923482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28658711-4	11.6712536591105	0	1.28645545230617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121973270-4	7.03373309826202	0	1.29889617531515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-98202440-4	11.5877092532278	0	1.30748805482983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91834256-4	11.2508555930142	0	1.28308904208234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40931345-4	9.37573640361591	0	1.30682030109298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71096726-8	34.9943826279955	-0.0542758571456615	0.327689847565061	-0.165631793444212	0.868446725317085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34190041903097	5.19770907578923
Merged-chr8-106953751-3	8.50603920517766	0	1.34867020177467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116608580-3	12.8491868672636	0	1.28867671924497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61242329-4	8.1748128083534	0	1.30314838244058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70968879-5	17.3706215628621	0	1.29223755979288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135568682-9	58.6277711109999	-0.483099811218391	0.280968560734367	-1.71940878351554	0.0855399639969247	0.551143215080166	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94157850340008	5.33959958501454
Merged-chr17-83680439-4	11.7474329786385	0	1.28105274260906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-91492905-1	5.07837982410363	-1.35535431745523	0.681922773280171	-1.98754810744292	0.0468616903363234	0.353809822844297	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09396764510349	1.84515340046558
Merged-chr2-170321639-4	11.6698878841015	0	1.29111637939095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25487210-4	13.4424891292513	0	1.2855252107291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61861927-4	12.609556047636	0	1.28556528163237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152766651-4	10.4873216271916	0	1.2906401782206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88707300-4	16.3774397505606	0	1.28050031416787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88745531-4	17.7623641672518	0	1.27867716728122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116597783-1	5.90651471884661	1.59427525083493	1.00273358885595	1.58992903853344	0.111850801252897	0.674822496415089	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.842308338728371	1.05629245276768
Merged-chr10-127610768-2	9.18858571924614	0.766102099323287	0.777726598076901	0.985053232353943	0.324597923915761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45836017000977	3.05043424441622
Merged-chr14-74848359-4	17.2669290302178	0	1.32027743652713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87397289-4	14.0509507119852	0	1.30818234178422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109126299-3	6.82181861560823	-0.483413778760695	1.06377435231664	-0.454432631984346	0.649517469890108	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01074310944854	0.73596151290311
Merged-chr12-85347711-3	14.6465056513511	0	1.29213121395973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105271393-8	46.3706172919994	0.893775203254104	0.341079100962637	2.62043379594814	0.00878179794623787	0.100289298950517	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97543921312852	5.88758092869766
Merged-chr4-19604683-6	22.6243843970887	-1.42031017774878	0.397488519924967	-3.57321056219911	0.000352630979634366	0.00844066813010524	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79208592384703	3.40500680697766
Merged-chr6-134072610-8	31.6801091939598	0.448169979425797	0.294915640867672	1.51965483453924	0.128597748581452	0.744449723494293	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45648656864278	4.85636781156867
Merged-chr18-54997742-4	9.14822483428325	0	1.29977473686528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106332947-4	23.8585125677717	-3.21409181025674	0.999102507909045	-3.21697902348708	0.00129548070095995	0.0232311970046457	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7127183436801	0.382164212378408
Merged-chr12-99796111-4	24.3680003863597	0	1.28761624303966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80069334-4	10.8523692030701	0	1.29551163829245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30592528-4	10.5115154508905	0	1.29356210332766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90597692-4	24.5858619487702	0	1.28540482420631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95000803-4	11.7364131990706	0	1.28800425203618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185350080-3	13.8237644939097	-3.28233705102936	0.697814858264409	-4.70373625920364	2.55443187159006e-06	0.000169808652167776	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56427399206875	1.41083941945204
Merged-chr14-55728478-4	9.13974962754597	0	1.2923443018258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29853248-4	15.1073906538407	0	1.28828094037309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71150683-4	12.2687899074305	0	1.29140476678274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19098879-6	32.6972309420904	-1.56877668616768	0.46442121062606	-3.3779178260461	0.000730369025627532	0.0148100981511668	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40518690989445	2.98923977879559
Merged-chr5-25087162-1	2.85201197393707	0	1.43963856019062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62088126-3	9.23648576585235	0	1.28919599558142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156532218-6	39.91163687655	1.25215284997405	0.275107266175856	4.55150773507248	5.32628392274826e-06	0.000304773510696942	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93712830920308	6.23903042687269
Merged-chrX-96145104-3	17.3744400849808	0	1.27653757174272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23305904-4	12.2033880903689	0	1.2880850673902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136609937-1	1.81816426058853	0	1.65836720520448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96871687-1	1.60073752390626	0	1.40088346984434	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-39838089-4	10.1707733398385	0	1.29728608932799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100583316-4	15.3793156085335	0	1.29195197924803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117965862-2	3.36638156007442	0	1.39603879656861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142396725-8	39.9659512253864	-1.25963991459172	0.315623561604002	-3.99095653122415	6.58073422768373e-05	0.00227888001506212	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78586289729027	4.20686959134459
Merged-chr5-137099086-1	1.42793271637916	-1.92528113593914	1.4460313509148	-1.33142420094913	0.183049470679382	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03510717223312	0
Merged-chr3-25721737-1	2.28598842763334	0	1.42381908178514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127185042-4	17.168869642897	0	1.29985987101021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102608264-4	10.756707562806	0	1.29445185251327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173978943-2	4.82348352385032	0	1.3502776413155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154009999-2	2.96263740393202	0	1.50917410842594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50551137-4	13.1321087858916	0	1.30832476495547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73772192-1	2.9943025766682	0.628002836263448	1.09607576205198	0.572955682450049	0.566674701185681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	1.20275690226768
Merged-chr2-173783891-4	11.121133417348	0	1.30076590067276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109838774-4	14.6516551579152	0	1.2961202162275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138345108-8	46.8080692692879	-0.444134608020133	0.248583866060758	-1.78665902601893	0.0739926153143534	0.496368077233522	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28051855854384	5.8102558031193
Merged-chr17-56153909-4	9.37271281132429	0	1.29094365420629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138229727-4	12.4521241064422	0	1.29187435095728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21115942-4	10.7310161686403	2.4228851446072	1.18066651445549	2.0521333627596	0.0401567033863398	0.317178898138323	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr10-8766213-9	50.5646454363196	-1.34091377205379	0.292834302240589	-4.57908708711357	4.67009739119161e-06	0.000274188844676376	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.50918728650373	5.17271980130391
Merged-chr10-111986627-4	14.6188806868128	0	1.28077264698844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103182347-2	5.59572400696048	0	1.29501838815613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-112371042-4	19.0058691163528	0	1.28435285492061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106678377-4	13.3897588086146	0	1.29336640439247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25531071-4	10.5552957213111	0	1.29590262084222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26717765-2	4.87991363947495	0	1.34005662680385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56548018-4	9.4942285930645	0	1.30401043582636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125542051-4	9.72260596272302	-0.429208001850047	1.06614540779025	-0.402579234233768	0.687257788600164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913467560099968	0.61242769162773
Merged-chr18-39763646-4	15.9681942993854	0	1.29211109290488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9552623-7	36.5124475204076	0	1.27643444728231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36709020-2	3.85446014266357	0	1.36237023541396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31170473-4	10.764096276309	0	1.29601914273905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141562424-3	9.97814446895792	0.548152340353941	0.615006521251409	0.89129516747004	0.372770840540346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30012339818195	2.47759419528723
Merged-chr3-31425571-4	13.3262879741025	0	1.29641221816379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122131266-4	9.562602813146	0	1.2850864438453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4771328-4	44.083913150596	-0.714943917109816	0.23548451119761	-3.03605495526566	0.00239695672275817	0.0372932223822274	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07426120609736	5.37015284095227
Merged-chr7-83658838-4	10.8237740574843	0	1.30671679459191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117817176-4	10.0203875945173	0	1.30211337812104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58302528-16	114.313888244823	0.496606373642729	0.183525569529146	2.70592471074643	0.00681144867932267	0.0824260972961147	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.7465633858067	7.23768671548211
Merged-chr13-69382972-7	42.1750640447038	-0.0718695122014848	0.323177855275511	-0.22238377731734	0.824015139484886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15281684283831	5.10084761059569
Merged-chr10-24823968-14	94.7471052062318	-1.20910707630437	0.239649737809841	-5.04530940594554	4.5278804932324e-07	4.31310318820356e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.5011061997209	6.28993274789305
Merged-chr10-88372732-4	12.4640526832774	0	1.30767234967669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59613974-4	9.14273757759019	0	1.28999367160435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94236893-4	11.2170634286624	0	1.32700803194001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126126937-4	18.1526694445276	0	1.2886009412247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83343341-4	12.6515668535447	0	1.30741708758672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98342766-3	12.0240848286652	0	1.30527078558083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96705765-4	10.4215323920229	0	1.2875421323309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19303961-4	17.1326333893449	0	1.31385619834701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121580091-4	7.8313920386687	0	1.28815874604293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99190941-4	9.40821801509242	0	1.29082637252061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84482068-4	10.4326032383953	0	1.28675068481103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69595943-4	8.5711847572651	0	1.29753880123717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59823262-4	9.75051081324091	0	1.33051057902784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52444143-4	15.8824232791819	0	1.30719723346868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35038410-4	14.0305882861116	0	1.28406740913275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91335345-8	41.5131961242661	0.876134491282685	0.323084384714326	2.71178222388362	0.00669225442309439	0.0814209751501631	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12101715779463	4.86240201921223
Merged-chr6-128850101-3	6.62817994885443	0	1.29494242111594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95507574-4	7.15189117344792	0	1.31924315291811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-22916921-4	11.6567045547925	0	1.29058909536466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119597868-4	14.9127603688384	0	1.30235315865872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86920785-4	11.4712213274853	0	1.29492513078865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75857289-7	53.4058513145891	0	1.27604196742072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78537730-10	124.585333864031	-0.919100094165298	0.164105360492932	-5.60067076056837	2.13523949413983e-08	3.40315512156247e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.3789548842551	6.4411557126428
Merged-chr13-55016680-8	47.5847058381879	-0.363440951156263	0.293808741154634	-1.23699842873286	0.216087665963214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91831829311148	5.56454438019682
Merged-chr19-46014720-4	7.23246486990695	0	1.28967795114812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16956615-8	51.7854618398515	0.547148955801778	0.265329172596255	2.06215151710574	0.039193312905113	0.311762169823191	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54728603634632	5.00060730440226
Merged-chr4-3691536-4	13.4845141451718	-4.56025092353092	0.963765380589853	-4.73170235762143	2.22644713852428e-06	0.000152026556649956	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64963703635796	0.688405034366054
Merged-chr11-83082304-2	4.13313131336577	0	1.43555695693128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141871562-8	56.4022732735236	-0.595558016755957	0.280698708857343	-2.12169845447572	0.0338630685023086	0.280521018958147	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65743286058518	4.77742198584244
Merged-chrX-71264207-2	7.47978535334642	0	1.30556205586529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128738110-2	3.22956423091366	0	1.44611012799613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102828656-4	17.416813726433	0	1.29426286690152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45006046-4	19.4143248685014	0	1.29866187186727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93944434-6	76.7047237268844	-0.303720335366356	0.361469334823845	-0.840238178196686	0.400774856313645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44566376845897	4.10902270631569
Merged-chr13-112012817-5	24.7392005593238	-1.58019020831349	0.406299440816479	-3.88922565371495	0.000100564580106967	0.00318232109039703	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52925066748812	3.95045521167234
Merged-chr15-50650007-4	16.3451376477621	0	1.28907016531097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25550471-4	10.5428462344429	0	1.288222310461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127492169-2	8.91691595469127	-0.820612440839541	0.913318960034408	-0.898494914425761	0.368921755260574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57301312142968	1.04220233489076
Merged-chr2-148498072-5	19.5798515254209	-3.80508136636785	0.695465797524151	-5.4712703053319	4.46821184327488e-08	6.3336175945909e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03804069807278	1.41293295987929
Merged-chr3-95669030-5	32.7632356048413	0	1.2844587579405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86888242-4	12.0820497819035	0	1.28970661131028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40273524-4	11.8046769906026	0	1.29611162247842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41097851-4	12.3537867372848	0	1.28233325863108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122013780-5	23.5483884266388	1.65501667687814	0.616506523761815	2.68450797045832	0.0072636651353177	0.0864259763169101	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80057470692292	3.31598728753819
Merged-chr3-28032051-5	19.7257229822538	0	1.28352914774907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-109230999-4	6.54732250634485	0	1.32580959359785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87185907-4	32.1034694498448	-0.672059742071794	0.496062945593925	-1.35478722617984	0.17548535755964	0.927397183590153	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48818300595093	3.55866154161747
Merged-chr2-65391518-4	10.9635147256955	0	1.2980455636974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112003255-6	26.3385091901017	-4.45376139849398	0.764159424741574	-5.8283144253572	5.59900120133714e-09	1.09871571322095e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48217225770571	0.989878296978726
Merged-chr17-27932590-6	34.6357419225504	-1.07703834177679	0.338765700423357	-3.17930162478319	0.00147630381940244	0.0256502391339197	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92614356600036	4.803866944429
Merged-chr7-68692936-8	56.2696398946025	-0.495437779925744	0.270951287245351	-1.82851236826609	0.0674726911553917	0.462797362888656	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74026394220244	5.32093915605234
Merged-chr13-30696104-3	15.6602906262186	0	1.29189358802852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37526323-8	57.6349976916783	-0.411955295916433	0.220611238833519	-1.8673359439648	0.0618546889189852	0.433453780386059	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63907359145443	5.25118484975253
Merged-chr11-118459322-4	35.6597495268011	0	1.29270561092653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109298307-2	7.53261953304152	0	1.33192605993116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-20992671-4	12.7972105654745	0	1.29695393996305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-127621343-4	10.0194790903404	0	1.29163912779176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97924077-4	8.80731094850172	0	1.30826773522994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84201200-19	211.681208000994	1.53311876565555	0.353331445618668	4.33903855619509	1.43107416346765e-05	0.000674224746113606	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68158427723582	7.25309638435866
Merged-chr1-135617532-4	8.31652296216981	0	1.29763215318657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17977030-4	10.4100330757836	0	1.29080308228277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22437689-4	15.4007126878208	0	1.28469294447404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10424558-4	9.66178772508473	0	1.32443286581441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55202179-4	12.5964599535516	0	1.28291337866635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59567340-4	13.0769283637208	0	1.28718515442869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115789316-4	15.0279068118594	0	1.29448671028625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34639794-8	50.5840876285263	-0.962246562261379	0.328009544089044	-2.93359318227692	0.00335063060696966	0.0482084464461823	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12700062709304	4.24682062025367
Merged-chr14-102978833-5	13.6970482144245	0	1.28778639972643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46478939-4	14.206077318989	0	1.28895598922859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181917619-3	16.9430957630478	0	1.33200925820587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70990361-4	10.0017477817218	0	1.29574570538458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83809897-8	34.1930828102303	0.371590131195036	0.285793489750816	1.30020502398087	0.193530709193492	0.994531120081622	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96832636551774	5.28895033400679
Merged-chr7-24394662-4	23.2440765669924	-0.960094358287543	0.489394791368432	-1.96179929827809	0.0497858554271199	0.369525955104564	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77801537264644	2.95705471804045
Merged-chr2-132111545-4	9.47789728668036	0	1.28942120430001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160086600-4	11.2406142885526	2.35170956858183	0.658896688775048	3.56916282726187	0.000358123801890751	0.00852841033467675	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42297107302688	2.97283807204493
Merged-chr2-155602591-1	5.55825314431292	-1.32406642385388	0.659283188330762	-2.00834246540744	0.0446069122409582	0.341991403327457	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93991462365812	1.80505237968249
Merged-chr14-47361936-13	160.454795931227	-1.06943421136019	0.218154410840344	-4.90218926695392	9.47744564428795e-07	7.67854366642073e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.39674826169999	6.2624085464598
Merged-chr10-62324044-4	16.5764176178521	0	1.28462173911984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60367251-3	20.2684742283257	0	1.28541798242185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90545516-8	73.1580113656477	-1.61635961861523	0.360379350856601	-4.48516157979983	7.2858700919701e-06	0.000391209915390204	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76818608877221	4.19297638740036
Merged-chr6-5167497-4	10.5394818433405	0	1.28960244679929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87448325-4	16.0513079130918	0	1.30365473874881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45790778-4	10.5525295620193	0	1.28632531560319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-106574725-4	8.12452205071568	0	1.29481232616723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12295123-7	27.7904678678635	0	1.27817416307684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38787897-4	8.74546371992846	0	1.28365927671847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110372654-4	12.3924273662469	0	1.30017938216704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116531461-4	8.67356446470458	0	1.29561860292753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184618201-8	58.5806824149373	0.827296344907382	0.257982330773549	3.2067945987881	0.00134222794521248	0.0238016899071519	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52897370050109	5.35543059468481
Merged-chr12-85123239-4	13.7015672578663	0	1.28692833223457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32478863-4	11.7610096337044	0	1.28135128817765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74631034-2	2.57743028124725	0	1.49730012537324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-19303025-1	3.94222473842895	2.10979997072558	1.51669508433061	1.39105083976502	0.16421001066451	0.883063431884467	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20958864040189	3.03633090095135
Merged-chr4-39617044-1	2.28983602202575	-0.917926184512126	1.09979367903885	-0.834634897442159	0.403923307214534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98635868414496	1.89255009218154
Merged-chr1-74435790-4	18.6852528741108	0	1.28507793196365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64485120-1	2.12408093173328	0	1.36396577907614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109861419-1	5.47131223272184	-2.28092737047874	0.71474528107232	-3.19124509231696	0.00141661053171798	0.0248336697306486	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4838593558337	2.38713383244935
Merged-chr13-92322779-3	14.4507606678193	-2.73109371469518	0.572385071593499	-4.77142722659051	1.82925073154085e-06	0.000130069878458398	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12433899047167	2.11086637835816
Merged-chr8-70869679-4	8.50273113291696	0	1.29210955771975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98944710-4	13.3999437742141	0	1.28793906612219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37171715-2	2.55784058840557	0	1.45918039411878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64141008-4	10.615206863432	0	1.30552229953224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61793599-4	19.0744316749742	0	1.29889141470125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82122721-3	6.46448362850675	0	1.32118121418993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98357872-1	1.39207709280636	0	1.45473642076786	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85885184-4	8.59462658706895	0	1.32120810427438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30373746-8	53.0085291540308	-0.767377067678176	0.278177218254844	-2.75859062971564	0.00580512056554677	0.0729082084328693	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52502834840499	4.47789115997836
Merged-chr17-17878254-1	2.08833136220485	0	1.48056460224714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78092903-1	2.70535893611981	0	1.37010509848643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93976130-1	1.13785784459035	0	1.63084727811918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75686721-4	9.45987079237324	0	1.29697268615447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109822603-4	24.512680200822	0	1.29019669850995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74430671-4	10.506520028454	0	1.28796674514636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56748107-4	23.5323860784454	0	1.29932347518715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34195036-2	5.37306955722131	0	1.32089003218057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109690938-10	69.1978373091533	0.749534906227382	0.250271856418637	2.99488291233839	0.00274550210334412	0.0414815214902023	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11254862635484	5.81504952652201
Merged-chr14-50875878-8	54.8048983263298	-1.52345532070735	0.288761373833529	-5.27582792837669	1.32158051976505e-07	1.56923429072667e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.35156701375758	4.79283900363033
Merged-chr3-105018952-4	18.9290477840903	0	1.30132142503073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84562846-3	9.56216397077526	0	1.2918139770847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30300523-3	10.0196572045937	0	1.30136091628724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100439298-4	10.108442405697	0	1.29433484328253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155006732-4	8.64151203568292	0	1.28980968510467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101656020-4	10.6276813765861	0	1.30662587626888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24578710-4	17.1331996280436	0	1.31937678083389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59016540-6	25.1524749737318	0	1.27961860685494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25640604-2	9.23416844453966	-5.99445277082128	1.00126416376815	-5.98688436851846	2.13898734069932e-09	4.77045279062587e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.818169332398	0
Merged-chr13-100594249-2	9.42232050353501	0	1.31391269836512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27414566-2	4.02070920713319	0	1.32722065755366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32620180-2	3.31747805699034	0	1.34605336022889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55706993-1	4.70349912503329	0	1.32995647959128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52091095-4	8.65394907905284	0	1.29387277549727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56266681-4	10.0514370096371	0	1.28986851775133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25318620-6	51.3091286602574	-0.0547888168875853	0.355321129250478	-0.154195212097738	0.877455817236481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77089342224417	3.77820357258503
Merged-chr4-8915746-4	11.3387460762741	0	1.30304135742878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127330344-4	18.545720938398	-2.48595266430984	1.0287840857795	-2.41639883302262	0.0156748814191896	0.154913914279849	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95429003861892	0.306240821987646
Merged-chr1-152682846-4	16.1064765246681	0	1.28504713665797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109331571-8	38.8367736298645	0.063547513943492	0.293285731278575	0.216674413945941	0.828462089033931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52959143279791	4.46766812124237
Merged-chr9-72133371-5	32.4661234259122	0	1.27556460705469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149220404-5	22.4895959017784	-2.39828249536204	0.570530198237655	-4.20360307442137	2.62699441417488e-05	0.00108992747294395	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9617778523502	2.09355669101354
Merged-chr7-75686261-4	10.2879215640429	0	1.28911140373111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86085161-8	52.7219221190372	-0.908034238330857	0.293175895267467	-3.09723361636689	0.00195335867655905	0.0318791648547521	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40713442254263	4.39347823902617
Merged-chr12-85389305-4	11.1683229800746	0	1.29110067869715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17815513-4	9.85570277935728	0	1.2896683283448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83266571-4	19.7253454732407	1.46399193024575	0.473596413254236	3.09122258799677	0.0019933414582836	0.0323218091645161	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82024847729483	4.29603057298338
Merged-chr14-50372767-3	13.5085803168058	-0.550463842852113	0.7054746677096	-0.78027442805176	0.435229361348545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.064112450196	1.21171060354126
Merged-chr11-16638575-4	13.8136861018665	3.28653309170457	0.68708372082248	4.78330804835602	1.72433554625709e-06	0.000125198256228573	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.844994844608266	3.97975931787349
Merged-chr10-111365291-4	12.3861598193686	0	1.31907591772271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70436231-14	117.576139903445	0.344149847058298	0.166294996576901	2.06951414139	0.0384978657013727	0.307502937553098	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38577419974184	6.71142880522025
Merged-chr3-88513682-8	23.6623834284708	0	1.27951185668115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104370362-8	60.7294805676688	-0.914657777105572	0.25345871860658	-3.60870512616025	0.000307729144569444	0.00762566123664577	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20563083552903	5.31697432806651
Merged-chr6-47621202-4	15.2549043618561	0	1.29715547891153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82382485-9	50.5194383496485	-0.913421768418717	0.261399759221788	-3.49434816289832	0.000475220839333478	0.0105877193887097	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34745413846753	5.37179596653155
Merged-chr2-150675118-4	9.66808197110204	0	1.28477634660031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118633024-4	16.359202898251	0	1.29437089957319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30301048-3	4.6089748019083	0	1.39600028557809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96552196-4	7.44469878987696	0	1.28882398738725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7753381-4	10.3556681832335	0	1.28893963149801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70007171-3	7.34751711998639	0	1.29491066286387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21377068-4	17.3472349711408	-1.72615267595991	1.13497922694252	-1.52086719737588	0.128293167161222	0.743213235932378	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.98913279338339	0
Merged-chr3-126650556-2	5.11253665345794	0	1.3373671721125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157141236-8	42.1564420956036	-0.390381482840295	0.271007624796105	-1.440481547831	0.149731206820341	0.828220545541751	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39355839653278	4.94191623028595
Merged-chr6-134115753-8	40.3713965039665	-0.733483685399899	0.292651986839838	-2.50633420712541	0.0121990252872518	0.12905253463182	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64824806602177	4.79345952914062
Merged-chrX-163744102-4	8.94128368186629	0	1.30864431102723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34966360-4	7.02551947097033	0	1.32225111886205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34841914-3	9.52469554451983	0	1.3028743486997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26639668-4	16.1011315366394	0	1.29810369705983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70632274-3	13.6922738301495	-5.58818421882995	1.093185541718	-5.11183509621596	3.19044275098461e-07	3.23228948846264e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40411339416916	0
Merged-chr1-152597089-4	9.8152201687359	0	1.30094459527902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47011174-9	74.9749951720763	0.02981834197322	0.176240003973538	0.169191677830971	0.865645875553271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23379573196486	6.26715231470703
Merged-chr9-65364363-3	5.9562037031226	0	1.3084473043494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67188732-14	65.7904146328253	-0.661363413287419	0.252809016887781	-2.61605943264671	0.00889510732085251	0.101344720383104	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60894822763209	4.90899188137605
Merged-chr14-30631240-4	13.8080709088935	0	1.28923185447609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24572811-2	3.48451724296319	0	1.37740250823189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76802113-4	10.0395837626746	0	1.2838533870383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35559263-4	9.44144141183385	0	1.30156185047455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103842557-2	5.35502995413035	-0.682981107019337	0.823102683978411	-0.829764159822921	0.406672138139782	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1301432392286	1.87496859647037
Merged-chr2-168539255-4	11.2377857320364	0	1.28946561959885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56315364-4	14.0540383365069	2.18630816810268	0.84222114380303	2.59588373456223	0.00943479845998962	0.106056097891576	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	2.08628700317133
Merged-chrX-103529402-6	26.5443603891371	0.436332708762244	0.320599612676257	1.36098950688021	0.173517005506824	0.920419047150656	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22253155458703	4.58223914515412
Merged-chr11-110538413-4	14.0578326967795	-0.398456144683013	1.27736393176645	-0.31193627342522	0.755088954728176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr10-44858870-4	14.3101406400063	0	1.30910262271937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50711541-3	13.954203120167	0	1.2936475483143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-21955009-4	10.642034156145	0	1.29025036269749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69144520-4	15.0756581403621	0	1.30279257547586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118038567-2	4.26149921233603	-1.68646844163151	0.783528320549646	-2.15240266037665	0.0313656543587015	0.265288642211197	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4813176420331	1.90927269178975
Merged-chr10-99247315-4	9.97803078884221	0	1.29748514944901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120325883-6	45.8512390529326	-1.08921886085523	0.392550526023603	-2.77472271375771	0.00552487910288114	0.0703759746309691	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35303804262668	2.48110925856644
Merged-chr13-38193039-4	18.3716328836175	0.55363405082198	0.391014727417504	1.41589053302036	0.156807557151916	0.855535328517084	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71733723772394	5.25337580344242
Merged-chr6-145341949-8	44.5486076128792	1.69441302403959	0.266379674022773	6.36089457746966	2.00582082738734e-10	6.33199844379001e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36605431602402	6.04959797206331
Merged-chr4-138024831-3	14.2976815954995	-1.82215818364562	0.451090272113865	-4.03945351139309	5.3575885303095e-05	0.00192044421339333	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36984141365265	3.40622887944214
Merged-chr13-107101775-4	12.3161557809865	0	1.2968024646233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57980876-4	9.86023196689425	0	1.2992516304365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69320944-4	9.47868604123811	0	1.2885763217874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24595897-4	18.088824818629	0	1.33372032579423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122935030-4	13.0691714294118	0	1.29026355988597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21953622-4	11.0439169791886	0	1.28612058723312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101907436-4	10.2868488698471	0	1.29248503608574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20140196-5	27.3678007841486	-1.61682013774941	0.588911382435669	-2.74543876374479	0.006043004409573	0.075245077390998	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79562680436062	0.993458951033742
Merged-chr13-56352643-9	92.304098333529	-0.529553263701716	0.201037404951221	-2.63410316020646	0.00843598528223312	0.0971037333543783	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.01990206216042	6.45852878723244
Merged-chr4-89351690-4	7.33786003031853	0	1.31267321966227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132983220-12	90.6369184279752	0.307380322903205	0.239689363524557	1.28241119415261	0.199698439402457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31849750650524	6.64056203820933
Merged-chr2-18649098-4	9.15732415310766	0	1.28827127688296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-93127075-1	3.0866826966368	0	1.50632517405659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-88459044-4	10.4144919221426	0	1.2903944611164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116865619-8	50.5960196519005	-0.574399785714007	0.279539474238642	-2.05480741951901	0.0398976092993523	0.31593671474226	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48820998331334	4.79596970722765
Merged-chr14-47533840-7	49.652255726941	0.524041135576041	0.317764771350302	1.64914799506941	0.0991173190318913	0.616732082408871	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68336739530101	5.03140789374975
Merged-chr12-73201818-4	10.7119853528792	2.4657464093322	1.17758672728171	2.09389792888039	0.0362690738180308	0.294232017096591	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr7-100431293-8	60.5018921715762	0.415815529951138	0.302492832124333	1.37462936569759	0.169246379710014	0.903191010904906	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63344347871576	5.16240427663388
Merged-chr6-125509950-5	31.6263517596915	-0.949561773136773	0.379781371006624	-2.50028528418844	0.0124093331233204	0.130558731649734	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34139239953058	3.14706260651765
Merged-chr9-70761211-4	8.71446438205499	0	1.29498247194401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81432921-4	8.5545604193445	0	1.30481471281028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48817490-8	53.1404343308459	1.24918645704206	0.269838684240951	4.62938240510619	3.6675793004286e-06	0.000226952307732772	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58847798513172	5.48299527079081
Merged-chr6-82045306-7	48.8449091466828	-1.4204666526473	0.266159642835958	-5.33689720016185	9.45506101809416e-08	1.18589331533278e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61510543821307	5.19002552548689
Merged-chr7-31131072-8	26.6488641458571	0.580140538867895	0.340051174425006	1.70603892149132	0.0880008331976706	0.562616421694059	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77242512775307	5.17244350162826
Merged-chr1-9953117-4	11.7905178387102	0	1.29128552378077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53059236-4	12.0960753765531	0	1.29796515141284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105971943-5	41.9502143422838	-0.190708654316621	0.429507574401375	-0.444016975911125	0.65703031053748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82096208080685	3.05445496320943
Merged-chr1-55488508-8	48.0958763552875	-0.738592029882759	0.237239078361839	-3.11328148373706	0.00185019463020437	0.0305618853147964	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04816911786151	5.29280190923873
Merged-chr16-59617384-8	48.2399557094165	-1.37231816172445	0.252837155996514	-5.4276759929358	5.70925605722644e-08	7.75627954917918e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55346058171049	5.13477096446261
Merged-chr11-11762257-4	12.1837356225994	0	1.31094769788907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8776154-4	16.2886759907183	0	1.31816531789963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56272418-4	10.1536375578896	0	1.3046962997437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69655621-3	9.99317978839022	0	1.3145373014521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95797772-4	9.75033864264315	0	1.28957110242775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191639633-2	6.91338391646449	-5.01670232129493	1.06014429461314	-4.73209387324543	2.22215596777244e-06	0.000151892263462404	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84186226741777	0
Merged-chr17-86978683-4	11.3148040376558	-0.589717347817659	0.844804837922665	-0.698051575163497	0.485144940490666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37637017936925	1.04220233489076
Merged-chr3-61393150-4	17.6476703305585	0	1.29058127158436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111731944-5	28.9904955297052	-1.24194993458291	0.33889114437669	-3.66474590791443	0.000247584259038001	0.00643797890612704	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22655987845679	4.93973986331528
Merged-chr7-16043618-4	9.75092176122546	0	1.29204918168416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27937745-8	50.173335528332	0	1.27466374397207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-126836867-6	23.2143392597418	-1.50098307326828	0.409781488728025	-3.66288647622267	0.000249389081215731	0.00646433117854946	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72728418537008	3.36497541999394
Merged-chr15-88101533-3	17.5105083561282	1.58067077385838	0.416183043816746	3.79801819738333	0.000145857617617917	0.00427217027380564	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31038721104618	6.00657640012291
Merged-chr6-66973301-4	11.195302570531	0	1.30195759861584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42436153-7	44.4826469902527	1.27052214755699	0.254438196008523	4.99344110863933	5.93128774945352e-07	5.32155945621635e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1405279132679	6.43292377663559
Merged-chr3-144693279-4	13.134498807853	0	1.28866173566053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127922551-4	23.0803222515997	0	1.29113938676405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87675179-8	36.5386312598965	0.213363983356414	0.281789773464221	0.757174331535863	0.448945426187785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65977370893818	4.81000532612847
Merged-chr7-101028717-4	16.3996161999359	0	1.29934826667378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6074094-4	8.73213998812989	0	1.29338803476934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29495865-4	13.5564239448415	0	1.28391967541058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137302745-8	53.77668851355	-1.42832139229417	0.267868363213748	-5.33217650325665	9.70425449572478e-08	1.20779560914999e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.63954402504736	5.20058114349849
Merged-chr4-150136913-4	8.14924783294847	0	1.29541037571575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35777072-8	85.9715055398168	0.984290085586185	0.289294570867802	3.40238008142909	0.000668016641934421	0.0137838857361578	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44708637474963	5.28135909394866
Merged-chr4-137622253-1	6.0235129297124	3.09145103077447	0.873269693351826	3.54008739145488	0.000399994555318224	0.00929187494199241	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785754803793435	3.04607318663426
Merged-chr9-85352302-1	1.79212567055675	0	1.52102171903558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127508188-2	6.05469374150849	-2.05064750311889	1.01357781319561	-2.02317718128972	0.0430548833998915	0.33312417925963	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52679039180644	1.24302299519605
Merged-chr13-37894398-1	1.91271340599976	0	1.42605586246148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45106552-4	12.4782469486684	0	1.30755447989538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44371277-1	1.67885852848035	0	1.50006742103622	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108820741-1	4.48438811263648	0	1.34932442728055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43304272-1	2.51937637113872	0	1.38989501847091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145019285-2	7.11222757724067	0	1.32376363951916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33337360-1	3.04671912050443	0	1.45289460884414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25546106-1	2.89902554016549	0	1.37492124039689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58742870-2	7.40576826238346	0	1.32932792568991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6359822-4	13.5439178203557	0	1.29899730735314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149280964-8	31.8086958950272	-0.316417599419694	0.289384392147598	-1.09341625880883	0.274211078118579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67380498811953	5.35606304749126
Merged-chr13-64252323-4	17.7863526423358	-2.88457256405191	0.607838294214945	-4.74562493265991	2.07863567958522e-06	0.00014496320930435	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61914281811857	1.57964324217899
Merged-chr10-60369603-4	9.9114946452727	0	1.28784731250186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25128152-1	9.21530428008707	-2.10198530723499	0.734133882789053	-2.86321794500116	0.00419361996958498	0.0568658000689978	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02800525049987	2.65421415838646
Merged-chr6-108277135-3	4.82485586748925	0	1.34507062253068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60516447-4	7.91269131877911	0	1.30681062990376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80874352-8	54.0248942867327	-0.0674972202225358	0.200986737571966	-0.335829224544567	0.736999650771231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27203592415375	6.21355991503567
Merged-chr13-99337649-8	50.9958401657548	0.302934795568849	0.277992153902907	1.0897242649325	0.275834624037129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65531575637594	4.96747129307304
Merged-chr14-64753577-2	7.25625258880375	0	1.3233526850843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117881148-4	14.7499748987054	0	1.29525462628075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84709329-4	8.03713549839208	0	1.29717450983637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19203164-4	15.0651727532621	0	1.32303073654147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129995216-3	6.98743978235143	0	1.37004719013765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75571318-9	113.497667960959	0.674469664273607	0.191436914701537	3.52319543660192	0.00042637682664184	0.00974878240508665	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45724756990521	7.12273800660788
Merged-chr8-123251158-4	14.841891748845	-5.79659985895645	0.989227449709318	-5.85972403076741	4.63637014179975e-09	9.35087170635945e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68679689373746	0
Merged-chr7-64048551-5	22.0078965190469	0	1.28251184084808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86477021-4	7.98812940560559	0	1.30455996011738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76897952-4	11.1693083390773	0	1.29699072802403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95924712-3	9.56165208835491	0	1.29924569431792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119357085-4	21.8976876761259	0.671270882282934	0.543294062724472	1.2355571841089	0.216623208128713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36671113435017	2.43305732527509
Merged-chr9-64105465-4	13.0675146076665	0	1.29135060466174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121851021-8	43.8812127774172	0.0146957761950546	0.356450910466365	0.0412280506615265	0.967114091484655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19034222147473	5.38291293681527
Merged-chr14-54733684-8	64.7791789346211	-0.407966382110705	0.25275707949181	-1.61406510524238	0.10651330528506	0.651218043334348	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49049998487339	5.06993864352034
Merged-chr12-85533819-4	9.43514333493929	0	1.28977733091215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58978301-3	21.3366913169863	0	1.2937338927812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90234042-4	10.6421766745198	0	1.29189893205909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32180333-3	8.5039916629146	0	1.29701745643025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75668081-4	9.36468572286087	0	1.28758757119254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28823651-3	10.020448070839	0	1.35864041461362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59454253-3	5.09063256685972	0	1.35740303475415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89575655-2	7.61612693068883	0	1.31494396761266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70653466-8	37.8848274525103	0.400737562578366	0.280545631444729	1.42842203785061	0.153170419737175	0.842301964835934	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17012115132598	5.52151576968227
Merged-chr7-35750953-12	54.6161753918679	-0.784204475246174	0.263572366535105	-2.97529094402135	0.00292710785895491	0.0436600753597963	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.202722555128	5.13354678494146
Merged-chr5-16541931-4	11.9850981449737	0	1.2973402309741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17865338-8	44.7342439126171	0.432512837067385	0.243747809791688	1.77442758331662	0.0759924506668266	0.50593859811148	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81679508368543	5.17255458235984
Merged-chr17-17392950-8	39.008902568708	-0.141045757328146	0.327956887745037	-0.430074081681733	0.667141753018906	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21298606749831	5.01839831038695
Merged-chr16-93084915-3	14.6310903935001	-1.2607417292238	0.464964876544678	-2.71147734554238	0.00669841181590638	0.0814807182654912	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85609555719774	3.71594332969903
Merged-chr1-135735474-4	13.1632600193488	0	1.29631538817778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42244554-4	28.0186615531593	0	1.29959068458823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90052362-3	14.6980410423323	-1.3510400770981	0.701375141802024	-1.92627311202806	0.0540702809261855	0.392391086108303	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18509169608921	1.05916644618774
Merged-chr8-126901299-2	4.82975378625614	0	1.32219542695631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57790742-4	12.5673392644501	0	1.29644483010353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52502926-8	53.7522150305517	-1.01929714851472	0.266979024607841	-3.81789224832154	0.000134596684225229	0.00401797849583454	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91197785750344	4.93978357180357
Merged-chr6-143225088-2	8.03278729614543	0	1.30285336973315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-114382372-1	6.27051603583037	4.23007473563689	1.09572954050564	3.86050989707266	0.000113150657324372	0.00349100229155732	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	2.92968630254835
Merged-chr10-44755494-2	2.51286700565468	0	1.48185468389067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-28463944-2	5.62245188519137	0	1.32514237988052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23008414-4	10.2760354783386	0	1.29212299590948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64637595-4	10.2669083064294	0	1.30516949004235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97294481-7	43.5365149652503	-2.14868213776056	0.506355565878803	-4.24342553444916	2.20133441432912e-05	0.000947617909346184	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5672887176851	2.11480110409737
Merged-chr13-37600242-7	34.6416074010067	-1.29801715792657	0.429485827480089	-3.02225841896202	0.00250896258572029	0.0386539763161231	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15488593029966	2.70235009098418
Merged-chr12-12289859-4	9.1174350882391	0	1.28784542775672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67194024-2	9.85706584300928	-3.80511260290281	0.736485016987543	-5.16658521916295	2.38409527413905e-07	2.54560604222043e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90726907089498	1.15307255889252
Merged-chr17-71684434-4	11.2303994715377	0	1.29291962591192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76691013-4	13.4722458576227	0	1.31303707102899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27234680-4	9.81747788123488	0	1.31183632852554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31253395-4	10.7164379659835	0	1.30598222000601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133163879-4	8.16986157530859	0	1.29816527106273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130129913-4	16.069648457458	1.21599144543681	0.617576773028352	1.96897211576477	0.0489562932145691	0.365182546395127	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42531987009748	2.96948545381398
Merged-chr19-40641063-8	48.2527369990491	-0.644063055654079	0.254820387644494	-2.52751776106952	0.0114872013578152	0.123238000316499	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.439020143022	4.68877320733712
Merged-chr8-122557900-8	39.8320771161525	-0.325820267112653	0.301462902804855	-1.08079721942957	0.279787325610881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.73981807186301	5.38315853932763
Merged-chr2-49554930-4	15.1410781368633	0	1.29311716845312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31081177-3	6.02820372272924	0	1.32596278977986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46357089-4	10.2844932635252	0	1.29212072255446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84363004-4	10.8600866225894	0	1.28526784049698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40678845-13	108.890199354905	1.81149878585533	0.255456914349574	7.09121062730926	1.32943823259282e-12	8.6400775576944e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33639755803035	6.19461622226055
Merged-chr16-91477807-2	5.38158488106379	0	1.33549797846766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83605208-2	6.53381040172782	-2.60634933511475	1.13686659854665	-2.29257270681245	0.0218726172068394	0.201025041349947	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03551904284955	0.382164212378408
Merged-chrX-93889228-2	6.98749696955646	0	1.29493941798176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85495546-1	3.57296139206497	0	1.37873133476642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108716350-3	8.59105346166022	0	1.29367450920642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53007659-3	13.8542646091143	0	1.28481199634915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117241232-5	21.5043825860287	0	1.28237730998238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71827204-1	4.08652958209674	-2.40445803234252	0.898019888191127	-2.67751089253245	0.00741714407947948	0.0878330976362056	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81742475406815	1.72320011534497
Merged-chr2-166980313-4	10.7684964132626	0	1.29198352581797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101020183-8	54.4403346160642	-0.895042829430134	0.345721156334475	-2.58891541067336	0.00962787418103602	0.107859260454994	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81439049791982	4.87815911575309
Merged-chr5-36549445-10	56.9066144728981	0.884954667751069	0.229648307082281	3.85352140842909	0.000116431077798376	0.00357197427690736	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14478884955374	6.24183925996649
Merged-chr15-25835108-4	13.7552321710636	0	1.28970022989989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14880529-9	66.8862520307208	0.13747950284855	0.227340647967387	0.604729088606592	0.545359017047441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94977233006064	6.05962129573328
Merged-chr11-118148086-4	12.783889273602	0	1.28623440830301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113782811-4	8.45658509654628	0	1.30568913370597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150831260-4	16.8182791505892	0	1.28255299989905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34906929-4	11.184009527	0	1.30409047700247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61908663-4	10.278565476323	0	1.29197864234517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97478830-4	9.70380663903493	0	1.29317616309228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112298364-3	6.96885985468133	0	1.31564452099404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56443407-3	8.85337044889201	0	1.30255647590709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78315955-4	16.2770205030565	0	1.29623448450645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65484116-4	11.3063082092147	0	1.28554327055532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16335467-4	25.5136515019728	0	1.29498200524114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24725974-2	6.93843832615067	0	1.3484976782919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27579461-4	7.65693976083763	0	1.31073532477541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182951506-2	7.92292167359451	-0.989020751504153	0.687847842877709	-1.43784815456634	0.150477142764419	0.830625760802235	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97621088666473	1.41926493179619
Merged-chr17-10848979-4	8.68583962034204	0	1.30387988502236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-157476404-5	13.403084428612	0	1.29748136767887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56071002-8	59.8610843334305	-0.342537872107105	0.279429655897044	-1.2258465230094	0.220256436122212	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08835590763127	4.71611829265874
Merged-chr1-123606259-4	14.760399790361	0.258180184997639	0.528036857165063	0.488943492285298	0.624881703241932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90080655943306	5.15893776852525
Merged-chr19-6408935-4	19.4462245271461	0	1.29279048879545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38373304-4	11.0510064497483	0	1.28384499479659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123832525-12	85.4910802816893	-0.527178487914729	0.198140910912333	-2.66062412596851	0.00779959727244751	0.0911757573104392	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5965394251495	6.06863899194634
Merged-chr14-55730291-4	11.6527587465807	0	1.29207123052096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36359310-4	8.45086966544809	0	1.29444091755569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61774368-4	14.5132267172452	0	1.28043061616185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80554645-4	27.639948093638	0	1.29130000207665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83906864-3	7.81864568142491	0	1.30845555235434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130488720-7	47.7478550647647	-1.54173633496388	0.302973267682398	-5.0886876811193	3.60549841046465e-07	3.5915380964973e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84135392604619	4.24248081902944
Merged-chr2-84382191-8	33.0612785881616	0.525136645717589	0.277120649232315	1.89497479589606	0.0580957408559447	0.414363411374308	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0830477078015	5.73453009360688
Merged-chr7-63755737-4	8.14234498518829	0	1.2918837675922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88802438-4	7.85714317415871	0	1.30234635048145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8705100-4	8.59394354082155	0	1.28664570738788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3923035-4	13.1363163684391	0	1.28758348763359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67444790-3	13.3152159646384	1.41414646337044	0.554378601910057	2.55086768951423	0.010745511077145	0.117205168894528	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91792141358718	3.25396805794692
Merged-chr6-134274094-1	3.27246186991025	-0.853822170665736	1.37323143280756	-0.621761307138234	0.534098832327982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0
Merged-chr4-145261508-1	2.24212754730615	0	1.42919162974333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191878961-4	20.7449421545354	-1.80268787919358	0.430212400017064	-4.19022761575929	2.78674764736867e-05	0.00114314382777748	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89570496637903	4.08406591029688
Merged-chr11-96874986-1	2.0763461215285	0	1.41638049399348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49007102-4	12.000977876582	0	1.29432952029262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43969534-2	2.79184401178263	0	1.53143970458842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131448593-4	9.8822783577799	0	1.29251664929102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73592551-1	1.87821287825152	0	1.39614122649398	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111771525-3	7.40899779927198	0	1.30968790912011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95662514-3	5.6374648705447	0	1.32877307939443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-56088857-1	1.62583091979382	0	1.49106820739211	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44225909-1	1.82083974492818	0	1.41994866002517	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87524459-2	2.41494937413273	0	1.46016696715265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34681154-3	11.5177488414439	-2.15131970745026	0.567573106954243	-3.79038344327984	0.000150414903569762	0.00437817919317135	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76940193103547	2.09157224416565
Merged-chr17-28750453-1	2.86401224133809	0	1.39442489436317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21935670-3	9.86262575357815	0	1.29343378723343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66333444-1	2.02872984890657	0	1.48444931510745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29772220-6	23.045626008453	0	1.27697063385217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102977393-3	9.03480987824047	0	1.29058563705692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80739091-4	15.9854341271963	0	1.29357864789428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43365493-4	10.1334812361279	0	1.28201356490021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17669609-4	9.22772200678613	0	1.30170294144557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143287458-4	12.0888340220979	0	1.30007331214174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41974294-4	7.03980975745934	0	1.31010123047047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31181407-3	6.10711918590075	0	1.32556332792651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32580694-8	61.041160988362	-0.492101505381717	0.253727729650934	-1.93948649624826	0.0524421272574368	0.38353477870895	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87903203459838	5.33158968515074
Merged-chr16-65406147-10	44.2706581040147	-0.352367848202568	0.26039608630985	-1.35319947851781	0.175991911828081	0.929247533154315	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97327390848314	5.66401342631321
Merged-chr12-34041143-6	24.1156308574403	-0.230541442552282	0.471918711600852	-0.488519393033251	0.625181992722005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9107719380235	3.37566223165822
Merged-chr12-25092633-14	123.934516943133	0.671910037772634	0.18777767088832	3.57822117291171	0.00034594065713664	0.00833840191208749	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.83087547884193	7.47141272412541
Merged-chr17-23967018-16	166.908717449586	0.215780659051537	0.156948825451577	1.37484723718503	0.169178809896868	0.902967532217539	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.97098529225649	7.18441245661218
Merged-chr13-89828641-4	15.4396540577654	-4.21386905184297	0.834979585618069	-5.04667314557611	4.49569477339429e-07	4.28869592207625e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83123129828127	0.733321818366247
Merged-chr10-112138771-4	11.4993507335531	0	1.28905777609551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113649556-4	12.0616434023014	0	1.29769488146512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36375574-4	7.19121748620088	0	1.31238505622439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164136126-4	10.1939712573834	0	1.28735018026472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50974005-3	11.5368753623954	0	1.28948194994934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93401770-4	8.25867461605897	0	1.30121983842733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7972140-4	14.5068799328702	0	1.29391331181783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81430577-8	49.3597978033513	0	1.27540815163892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78931796-4	11.6589942301534	0	1.30340769726171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64438897-3	11.9932895713883	-4.01147202808889	0.869851119087906	-4.61167657322229	3.99434149961648e-06	0.000243256514104323	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5891871854891	0.994591904006138
Merged-chr15-99400840-2	7.50162003314133	0	1.31727142688731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111015106-4	7.8862818986522	0	1.28701154703517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54398835-11	80.00417651348	0.601951052086398	0.192727080938024	3.12333403876941	0.00178814678119472	0.0297399438951261	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.09770893656867	6.71704102047483
Merged-chr17-87156379-8	60.052198206698	0.197351268448629	0.282060777499239	0.699676396691352	0.484129420145564	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26633147899544	6.46316071984128
Merged-chr3-146352381-8	53.331993057548	-0.62342717767382	0.295009023619961	-2.11324782552054	0.0345795618150701	0.284624769664639	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36648218421177	4.88097181678031
Merged-chr6-129049267-4	9.87027330703543	0	1.2901419521936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94443420-3	10.3054060913307	0	1.29328394557286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25386298-4	11.2315188423187	0	1.29691351909451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61812021-2	6.6694019227717	0	1.33912707412939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113643098-4	19.3295651565628	0	1.33997502407274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41290021-4	16.3182352025781	0	1.27942239087372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92107481-6	22.9792792491262	0.245636193876698	0.401388592533716	0.611966055951292	0.540560215870144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78401048490941	4.04582676502243
Merged-chr9-114861633-4	19.60879048011	1.06727290101063	0.628073813534236	1.69927941272535	0.089266549694791	0.568816377996666	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56654845392065	2.57139917454706
Merged-chr9-99107877-4	8.28872589695616	0	1.29402960028843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24355560-4	12.8074154671948	0	1.28736581148024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150545077-8	49.66980454001	-0.163593724148955	0.296571271328368	-0.551616896054042	0.581210857898508	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73480350440963	4.31976336970706
Merged-chr8-72583279-4	23.5105451845115	2.39650413608624	0.745758239107012	3.21351345572242	0.0013112165405121	0.0234169871703481	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.995223672918782	2.42594657933142
Merged-chr2-166293226-6	22.9326164609463	4.0336938925111	0.718645540201002	5.61291160504927	1.98950244164294e-08	3.19425126662407e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.848621293923477	4.16190355963277
Merged-chr19-17253049-5	38.6294963495675	-1.46588221318594	0.399032362427323	-3.67359229779997	0.000239164231786081	0.00627395659987686	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59409415140963	3.69945035786123
Merged-chr19-41989979-4	8.88150510972675	0	1.29632547680247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88705367-6	58.5733739860314	0.0915670016155095	0.404854657263422	0.226172528764886	0.82106723590799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40557431775206	4.51377558193557
Merged-chr4-145201632-4	9.70657463683956	0	1.29927519254438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44910312-3	7.01575589015534	0	1.31751331291232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64720758-3	7.32010398283317	0	1.32620881869604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8867758-2	8.32285966787152	0	1.31006436683834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105248280-11	57.8484469360897	-0.432192991260222	0.295341674626244	-1.46336608880939	0.143367232630842	0.802483657339338	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80309995400278	4.37181080578773
Merged-chr7-110179393-4	7.98127634740858	0	1.30435546715863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150217267-2	6.56722091236099	0	1.29471101141678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3406840-4	14.7537225168044	2.60807505510788	0.925648359944385	2.81756568473213	0.00483892158688885	0.0634948132563933	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.20491078807447
Merged-chr1-85987445-4	12.009684172668	0	1.28369402205502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12224575-4	10.348492534916	0	1.28680100453987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13561400-3	7.31499959212483	0	1.32101502142434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99101933-8	46.262551021031	1.18128323498403	0.27957805297207	4.2252359311696	2.38690573603775e-05	0.00101479988436645	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08059581883527	5.41278435326285
Merged-chr5-31758942-4	10.4827390002408	0	1.29968652322638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80128778-6	17.5085857934448	-1.69118206271025	0.478980207383895	-3.53079738293819	0.000414308988055316	0.00954634525157359	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19831515281327	1.60978507060531
Merged-chr12-25393947-8	43.3606801050963	-1.62467412410712	0.359203471837446	-4.52299114982484	6.09717905683463e-06	0.000340826571982819	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26298107525609	4.47589611298469
Merged-chr10-20771505-2	7.96225791470651	-0.377537927317678	0.682283847775446	-0.553344372065412	0.580027622528246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35466854393525	3.38551848038378
Merged-chr9-83555761-4	11.7036165841935	2.81533994016131	1.12441939010068	2.50381660521633	0.0122861700564343	0.129743385343852	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03295826569721
Merged-chr13-107935151-2	6.12069854254862	-0.951683078513194	0.842563828793177	-1.12950858557067	0.258683349814899	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91276902437443	1.99642079673038
Merged-chr5-19970263-2	2.36007891291694	0	1.56976925165464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97343111-2	2.32837415666698	0	1.45025887526964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37748152-4	12.9613026362673	0	1.29102388753928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120114811-2	4.16969486968071	0	1.33418391210405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19166453-4	8.83248826851383	0	1.29293913110571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118230156-2	5.7492764315934	0	1.32956919784053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115690517-4	9.20914605494008	0	1.29198615619398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96214099-4	11.1343438332603	0	1.2887399583812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61267431-4	8.35598805405962	0	1.28781108442694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105408234-2	4.58868553459922	-0.405346383847957	1.23004135990097	-0.329538824516104	0.741748453443382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	0.61242769162773
Merged-chr17-56814547-4	12.9643060430218	0	1.30087489929746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53543584-2	2.19435681215837	0	1.4692222956834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122653463-2	10.7994700796976	0.704993557218997	0.600720293396365	1.17358039168793	0.240563139004508	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66915570353226	2.79785788760542
Merged-chr9-24512044-5	24.9540964903195	0	1.28726744491594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152019315-4	9.29636507922873	0	1.2936625819166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145859529-8	36.0803019316078	0.391554774404037	0.286807742625761	1.36521688996016	0.172184891357829	0.915135738972647	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79204917389168	5.21701156531401
Merged-chr15-27715537-4	8.98888961061071	0	1.28965978303779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106704140-4	9.2617177379068	0	1.29958928078867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58503797-4	14.4567101789001	0	1.2910235165094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60946833-8	46.3367080672594	0.561900075647363	0.300649457229861	1.86895423269553	0.0616291820962803	0.43224434187652	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19389056480334	5.76271988018267
Merged-chr1-40410071-2	5.41593362700186	0	1.31753704830155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141308812-4	12.1651785476656	0	1.2869810651168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12440500-8	53.636444173478	0.828078752745477	0.287287588685067	2.88240350561486	0.00394653991941084	0.0545528170832483	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7435411276983	5.24695341407493
Merged-chr3-51228245-4	10.8787186592563	0	1.29359832973061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127578190-4	13.2980978979655	0	1.30023489202651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181846026-4	8.93598283470982	0	1.29975277874287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52825732-4	18.0764578232521	0	1.28684002627686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60877963-8	38.1469290606471	0	1.27529675106831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83134885-4	13.393239868473	0	1.30056686129337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102090795-4	10.1346652554855	0	1.29864467978196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116491274-4	14.4428990056869	0	1.28713804410246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74348488-5	29.6085243517829	0.857582947076084	0.639667885519322	1.34066906669833	0.180027922076662	0.944427724132777	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37948852793787	1.69735600200997
Merged-chr11-67047373-5	15.3364532199332	0.289703272011908	0.983399100738672	0.29459379390758	0.768304203635846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	0.890396206374751
Merged-chr16-62857697-4	14.3803475397098	0	1.28354494560425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151599052-4	10.7535317220657	0	1.29478688257231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23357534-2	6.83006224679173	0	1.29826907799673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-15799124-4	9.24885662456106	1.77574098436317	1.10356381855728	1.60909677764232	0.107595181758816	0.655789532471966	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.15692263537643
Merged-chr3-94595940-4	15.5791326165282	4.23282426354294	1.00382948573926	4.21667656078636	2.47929181112026e-05	0.00104321830450396	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.11197723984608
Merged-chr16-4782688-4	9.53979977748737	0	1.29600609105928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44351462-2	6.18677787257323	0	1.30424994968008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36531664-4	11.7798102625701	0	1.28616302970695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131548723-2	7.52389683463533	0	1.29798220812222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62613870-4	9.39387596576868	0	1.30073224335132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38189640-8	60.192465895532	-0.851640359859492	0.298922969652225	-2.84902950365545	0.00438528136328566	0.0587937209612771	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51035226008743	4.64812201800633
Merged-chr9-90021620-3	9.63272903105522	0	1.29066208404662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100925793-4	9.56457850377952	0	1.2905550438746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8822719-4	8.11753712501246	0	1.29336607222373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40469176-4	14.5302396526045	0	1.29909236363207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-75458352-4	9.92274084783949	0	1.28963516605571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23699937-4	12.0969449834035	0	1.28694009092965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12909665-2	7.79337009562088	0	1.30607454054893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95307302-3	10.106492954076	2.83301384112636	0.966234926200141	2.93201349310317	0.00336772114724423	0.0483876662462228	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	1.72585446146488
Merged-chr12-3874371-4	9.51418206280112	0	1.29176997901028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35777909-4	13.5612256835269	-5.30822443957194	1.05500627506547	-5.03146243300072	4.86752497136225e-07	4.57699689295682e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80375958646518	0.382164212378408
Merged-chr3-153571361-5	17.2218629320768	0	1.31227740603214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83657008-9	39.5859663786462	-0.459566919808415	0.2753624408563	-1.66895281135398	0.0951267320982088	0.597132702755961	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17891430981759	4.76044651936856
Merged-chr11-100369993-4	10.8515349783942	0	1.29262561552982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108134916-6	22.9709902486439	-1.96502517123061	0.454719372469188	-4.32140192435669	1.55040963140729e-05	0.000718532395559866	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56532256966049	2.31205403547308
Merged-chr14-52133847-4	12.0804726299615	0	1.28568735576582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87536303-4	10.0842592968789	0	1.29456266462568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111055385-3	15.2147317431975	-1.83864540718283	0.689429347852743	-2.66690910810422	0.00765523720259825	0.0898095386429058	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6871433197912	1.52696130946871
Merged-chr4-145300281-6	23.4686688352782	0	1.30031058697383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131446738-6	27.6226025293261	-1.41614223273577	0.318621864094678	-4.44458586280497	8.80613336948487e-06	0.000457176533990271	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50934522517834	4.14566045259648
Merged-chr2-57297676-4	13.3588989766295	0	1.30404399953403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65505960-8	92.4200206241296	-0.376563542163372	0.271857352534776	-1.38515121497478	0.166006234360369	0.889873001298736	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.29941128940342	6.87866293902189
Merged-chr17-31060879-6	15.5060151238064	0	1.28113336216568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13574439-1	2.3508052656935	0	1.4018974082504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82807279-1	2.13009837587189	0	1.39030141730404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75720354-2	5.14781983750852	0	1.32401560766592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56455922-4	13.9473911879999	0	1.29028198274283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133626729-5	21.7942725891494	0	1.31092029358524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10335505-1	2.99008915321027	0	1.34052697921775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34957020-1	1.86389464008351	0	1.41294782747641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114894949-1	5.49990397562942	0	1.31544943382316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56278320-2	3.04897895030488	0	1.44040960237408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55934804-1	3.00191897271146	0	1.39283246922104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146158533-2	3.82978940785993	0	1.31978292341893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128833192-2	2.82527525575934	0	1.5037773507123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77057011-1	1.54714230212815	0	1.57570038763543	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21421791-3	7.12911877899933	0	1.31883044537855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49995377-1	1.60416091985686	3.3971701302878	2.20512256367364	1.54058109342832	0.123418772318707	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr1-34867413-4	12.7648890395497	0	1.28993887859305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115814241-4	10.1893676069568	0	1.28926103114705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98255178-4	11.0846416621726	0	1.29194647128697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106573433-4	10.8147570881501	0	1.29847023602553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62760243-4	8.45659303814332	0	1.30384011847129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14233202-4	9.80848825367555	0	1.29774733300709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60937500-4	10.2267311508721	0	1.28372350959491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52500070-4	8.72123026637071	0	1.29181753155025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84015442-2	5.22411180446295	0	1.3163525536393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133412988-5	25.9218686922883	-0.69193320292415	0.286508037790355	-2.41505686283906	0.0157327533564994	0.155415344041392	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10139889231472	5.26045544538511
Merged-chr13-92804507-4	12.0295567695201	0	1.29886314300061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123936810-3	12.0688482423159	0	1.29555039405426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145149241-8	33.0287966213186	0.576145668600649	0.30505859937485	1.88863932956268	0.0589401732523073	0.418459861076192	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54588201878909	5.11518556416038
Merged-chr19-12011805-4	16.8099736088682	0	1.2821967047015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11929556-4	7.46351270751226	0	1.29828212328564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37778132-2	3.52647274516846	0	1.33729085346081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90208868-4	9.51975333770192	0	1.29607161649971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49276211-4	10.1399095709695	0	1.29140690531027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86618757-4	24.5601932088611	0	1.31821405964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66375076-4	10.3735150790937	0	1.2890209086191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121842127-4	15.9303400645687	0	1.29147035572155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136675921-4	7.6191760788655	0	1.28857027393448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80641988-4	13.7578796121173	0	1.30245623214595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127289454-1	8.14225791984374	1.1236132075377	0.71268166909496	1.57659900101624	0.114887822776394	0.687353596467233	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6748676060199	2.47843137798393
Merged-chr8-26076311-4	11.6333050305254	0	1.29269578456629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26957209-4	10.6917010273988	0	1.29117863850843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53563145-3	9.97158836912956	0	1.29450907375482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51118878-2	7.42884198819105	-1.67230987395895	0.510985108392117	-3.27271743636736	0.00106518906833988	0.0199443681546527	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4078303041895	2.88854826306555
Merged-chr12-73773119-4	6.59784398467019	0	1.32960188405518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34253716-4	16.2685764681689	0	1.29588269431447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13544221-2	8.13818077517975	0	1.32461414283685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10683299-4	10.229092299297	0	1.28869356457187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117776109-4	17.8093352223901	0	1.30118559939897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30749732-4	10.7845861337981	0	1.32353696739328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122614954-8	34.3771913517882	0.296907874950979	0.333222356707539	0.891020272122879	0.372918294807629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94377303763537	5.28082501190127
Merged-chr8-68886900-4	15.5391504451419	-2.49972579567866	0.621278878540446	-4.02351646260887	5.73355743335085e-05	0.00203511702357276	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9132648374091	2.16596752412581
Merged-chr17-86732289-6	21.7891420836776	-1.57087315780054	0.415497764393852	-3.78070182902717	0.000156386881069434	0.00450584529557462	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69742069738127	2.40493638229029
Merged-chr18-4256969-3	6.25132840919783	0	1.29514578489182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166327155-3	8.71714715382259	0	1.28524902633019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80807553-2	8.63421950970251	0	1.32251924913776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103378337-8	68.6906905607573	-0.732845117884929	0.324696730720695	-2.25701415674346	0.0240071901866908	0.216025041302602	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65488960731053	3.5415518707689
Merged-chr8-120750770-2	7.51883752337319	0	1.33920602511984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14824650-5	19.1736624983921	0.360669620871003	0.510038060652913	0.70714256188901	0.479477888585857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44642507902342	3.2196220251985
Merged-chr8-18619250-6	40.5931374966689	-4.08342797185998	0.565931882739773	-7.2154054160925	5.37735262821128e-13	4.03936891157279e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85436634937033	1.40264952818025
Merged-chr5-5809468-2	6.76709942642215	0	1.3086419246951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30163275-4	28.307630227888	-1.09149890174085	0.352685239413447	-3.09482444900764	0.00196929417633354	0.0320298265881776	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.45197042931249	5.24420037751496
Merged-chr15-73320775-4	9.66311184149324	0	1.30301912499791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71055695-4	14.62498088699	0	1.28461074566843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47359785-4	12.5885005092941	3.48407817180821	0.941626057529585	3.70006558755278	0.00021554375311841	0.00579580178013937	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.83276241593601
Merged-chr16-38701963-4	8.15273536334574	0	1.29546068812103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85397357-6	15.689832766208	0	1.28371703621167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19033877-4	22.5086554646977	0	1.29460550258901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122785401-4	9.78393671025882	0	1.32477511883371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129330818-6	24.7593782915411	-0.419380206505449	0.418920571658294	-1.00109718853227	0.316779824144527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60802475499667	4.20734739752629
Merged-chr6-73059937-3	6.47320040246623	0	1.30805157825166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78471169-4	21.5298819923337	0	1.28840495259383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149089142-8	55.6624735610617	-0.55113835465151	0.257378450218107	-2.14135392525857	0.032245507522224	0.270936552947963	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60820914850311	5.05126956743861
Merged-chr16-55750220-4	8.93846817453327	0	1.28502781532175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84226953-2	2.5252825733859	0	1.46999498441557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45050344-4	13.7649197114866	0	1.28157180900964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50498552-2	4.53681292206176	0	1.3543189978942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37359120-4	8.04642084922992	0	1.29747290381191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102982612-4	8.11222905798227	0	1.29114680894951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19690142-6	26.3720323143854	-1.22375694130475	0.397111670567381	-3.08164436355215	0.00205860626560107	0.0331008083247952	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44481471816728	3.21175319635018
Merged-chr7-122356701-4	10.0340688271266	0	1.28994878701005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74968414-5	22.1684208196232	-0.365273442142741	0.593116339014021	-0.615854627694056	0.537990469437146	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70363999091054	1.99834080004871
Merged-chr18-46424464-3	13.8743607802174	-3.24128842820073	0.632894022693383	-5.12137626834727	3.03313732666457e-07	3.11051296790493e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91506095622509	1.35032549026822
Merged-chr2-129360344-9	52.4650834395176	0.647535679938414	0.198989281717311	3.2541234098142	0.00113742856065032	0.0209902306479118	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36782655318878	5.96726584039646
Merged-chr2-116952926-4	8.64461248887607	0	1.32741812770578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55318911-4	7.17287845717356	0	1.35359243326362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66346127-2	5.48090331645565	0	1.32079352954581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70646106-9	82.2289792202607	0.131674698174884	0.208997891434744	0.630028835558838	0.528675718278308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69048645044923	5.78206865852057
Merged-chr5-36515336-5	27.3530320919118	1.22887345444177	0.321650314214305	3.82052620543381	0.000133167254436993	0.00398056364004693	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83641523422833	5.20370309530229
Merged-chr5-147758948-6	18.2660636721982	0	1.28535510663327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73023087-4	8.48660902016011	0	1.28620226573332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105640987-5	19.4289329757135	-1.94131299088989	0.440143946087106	-4.41063204015011	1.03069333575618e-05	0.000517294060816614	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18227656288871	3.2626815664136
Merged-chr2-104110271-7	31.9509249381443	-1.38993935992829	0.332927140963789	-4.17490552408722	2.98109743766438e-05	0.00120695658712278	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61350636823443	3.97721297952919
Merged-chr16-76768759-4	10.7966691095269	0	1.2911011228752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70370674-4	7.7287084520348	0	1.29561898896015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131321414-3	5.10616376363021	0	1.33091768995661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93125425-4	13.1230329722189	0	1.29338764655052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108443491-3	8.43230399356233	0	1.32969821077243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106242970-4	8.41360151027852	0	1.28721883744201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31559682-1	3.96868947691574	0	1.31846599240406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83859036-4	19.1265776848031	-3.55220056467292	0.594773908675646	-5.97235439022944	2.33853841609937e-09	5.07688143981492e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32066700833155	1.57481894122996
Merged-chr5-20256744-4	13.5799614022448	0	1.28662390129687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31076032-1	3.00457611160613	0	1.37948459901172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23980713-10	71.4411143230256	0.494801670861723	0.215507609840134	2.29598236103483	0.0216768899437236	0.199591101911027	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11187036702948	6.61002101256908
Merged-chr16-14352911-8	44.4458072739531	-0.136077419804709	0.355607598191779	-0.382661733035644	0.701970591294749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19703014309368	3.87644649098659
Merged-chr14-30694961-8	44.4016487513702	-0.320628981857894	0.251558936153602	-1.2745680465993	0.202462173354167	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55270274502806	5.25530785527286
Merged-chr13-64375887-9	52.8818961732555	0.0689457196935052	0.21705589680037	0.317640389917238	0.750757732877214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13834386701987	6.20749810196443
Merged-chr18-65381975-5	24.1439574899231	-1.76507541748374	0.459119917611967	-3.84447581073039	0.000120810400478567	0.00368212520040693	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42784796597665	3.53658386094885
Merged-chr3-146568811-4	11.8363744149657	-5.60985555106066	0.999778137630662	-5.61110044309956	2.01044024614036e-08	3.21208382210973e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43982998037881	0
Merged-chr11-51890511-4	9.61281158168164	0	1.29673675582694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142190499-4	11.6290915676959	0	1.2839326491762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96725947-1	3.32913780778431	0	1.33735093699731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29944139-4	10.2681347369963	0	1.28527830877041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107602284-4	13.0193925005565	0	1.29040337775076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37231310-4	11.8362723373421	0	1.31731747154226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65596714-3	12.5617412639983	0	1.29096426337557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68519561-4	9.25369011422036	0	1.29996216214737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12015205-4	8.58687676712216	0	1.29566313477351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47917844-4	9.98020162177407	0	1.29038375136936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76309356-4	11.022560409951	0	1.3057470080018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67042006-4	18.9452857205209	0	1.33193812935123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91956166-4	10.281578114214	0	1.29366211661885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69085149-1	4.40251548190713	0	1.34065220006461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93423142-6	32.7315556377354	-1.9440300543037	0.423210403096889	-4.59353087749745	4.35808500139764e-06	0.000260552079141199	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88734440542161	3.22831762469177
Merged-chr13-99315020-8	59.822848429248	-1.22718322986072	0.284358451668791	-4.31562073382682	1.59155034693135e-05	0.000734473509679209	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.75882546154584	5.54926936394463
Merged-chr13-45255490-4	8.62013541296283	0	1.29410410069618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8982665-4	15.7558562736976	0	1.28915350360083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20212884-4	15.3766885674758	0.723629239101935	0.522285410715772	1.38550536594585	0.165897992874625	0.889535590578913	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59634252504714	3.1404914953932
Merged-chr1-156986794-3	20.0143424583924	0.132715409209323	0.395275491346496	0.335754207166326	0.73705622482157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64682881002715	3.84436969367764
Merged-chr9-105122984-7	38.2934835962009	0.323390951056977	0.312976572794871	1.03327526456407	0.301475099451926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74439548103736	5.03031129369257
Merged-chr9-77751374-4	13.4418984717357	1.31662405712393	1.29549062109811	1.01631307527947	0.309480324111495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr15-81481198-4	9.71869270691072	0	1.28692192864716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16128955-7	28.7948891301665	-0.141814476144844	0.298897670563852	-0.474458284928483	0.635173138353637	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40493470900674	5.29277760610594
Merged-chr12-101758856-2	7.94726226584938	0	1.34063825638149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88097914-4	8.54453633746033	0	1.29148260381786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10706157-4	10.652584523909	0	1.2965881677708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59608596-4	7.38557775558808	0	1.31569440359319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75075471-4	10.1999871931156	0	1.30212833407237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110416711-4	8.34126154401786	0	1.29134094475861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71287982-13	105.0891996802	-0.352494146034897	0.1806883657529	-1.95084030211967	0.0510760459511299	0.376578506005025	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.48709020249321	6.08607862267258
Merged-chr15-99259683-3	16.4918326806659	0	1.28538461375594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49396504-7	28.4710750327767	0	1.27815436154197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33256893-1	2.15048481792749	0	1.36591428175636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131979250-1	2.38501255487754	0	1.37341224814516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116735562-4	11.3128670818994	0	1.31995471232709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36962468-6	27.3321271527033	0	1.29595755523336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39318862-1	1.71685001582918	0	1.5921312327011	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66813066-3	4.73432930455698	0	1.31506720055415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53239097-4	7.82893412674869	0	1.29310538379651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102400094-1	7.77637958300514	0	1.29333354586586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13336513-1	1.67438842046473	0	1.52229894206365	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44539983-2	3.06909227109194	0	1.34642151282383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31176614-1	2.18013148977169	0	1.42284034527771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28427762-2	2.2435785906528	0	1.36102943123252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169774646-2	5.26280017151305	0	1.39932166371115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99179862-4	12.8743038820417	0	1.28498226819608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18732775-1	2.11529165866848	0	1.37984599878155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16120844-2	4.08669008692758	0	1.33035370645491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89368911-1	1.87033591262713	0	1.4679944813303	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37791780-1	1.56558829524652	-1.19233182448092	1.51316114606738	-0.787974121315314	0.430711843253404	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	0
Merged-chr5-99516401-1	1.91426567678264	0	1.39891489491051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29998592-8	34.9902859332733	0.164422767335509	0.300694541120338	0.546809951131462	0.584509305763056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97942051436019	5.15643620475075
Merged-chr5-5186316-8	26.9405069940679	-0.383281799151808	0.352657081882498	-1.08683993273532	0.277107556350231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06111353758502	4.71194725212715
Merged-chr4-102566638-4	14.3158511707272	0	1.2869519094631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79206393-4	15.936252785655	0	1.28810801706387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115059107-4	13.2064983248923	-0.741241451827591	0.923220987592709	-0.802886266440251	0.422040474614213	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.314238126284	0.683637474991079
Merged-chr19-34521592-4	17.9128487019842	0	1.2900627467556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134070065-4	7.6301486674274	0	1.32809730995384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9886889-6	42.379915838422	0.131747265214829	0.420894724696404	0.313017145344028	0.754267636140008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37699396055041	3.0176734060616
Merged-chr14-45705850-2	9.98815571832774	-2.84790841663938	1.04940942307546	-2.71382012970032	0.00665122692059396	0.0810123158160546	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21776089336798	0.306240821987646
Merged-chr15-59615159-9	67.2569470785883	-0.749209097574768	0.22675990000521	-3.30397525116898	0.000953242470235712	0.0183639688856199	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.53662080899768	5.70907222857981
Merged-chr10-13933525-4	33.7510503777763	0.813937909409459	0.511560349604331	1.59108873476805	0.1115896074016	0.673806550107646	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16549982549434	2.62101378947091
Merged-chr4-10923385-9	100.121158648292	0.135976104003891	0.173394602122476	0.784200328842106	0.432922572230005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.21707084111056	6.35108369912254
Merged-chr13-94322654-4	17.2788398540816	0	1.29534605055355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80130884-4	9.58590349806542	0	1.29644182842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181281849-2	4.3124207989163	0	1.3166340684448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70835294-4	9.39396279144972	0	1.28989436842167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167293514-4	14.8819799214346	0	1.30011168655847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69655279-4	14.653904595306	3.13916362651959	1.08329084867767	2.8978031434046	0.00375786378820622	0.0524928104113133	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29684500016202
Merged-chr18-65376243-3	10.736995596832	0	1.32764901930538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44515418-5	26.6570292992508	0	1.27736147740618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78703131-8	44.8901560109243	0.116130729864759	0.299493215267871	0.387757464758893	0.698195525616611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63611800958241	5.69757361749554
Merged-chr7-71872495-5	31.7939307080525	-0.490305503260818	0.326558378707758	-1.50143292969861	0.133243622065535	0.763253706616659	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.43988786830569	5.91523857185996
Merged-chr1-37357324-4	12.6955925505915	0	1.29405372370067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66137409-8	43.7767833345827	-0.583806805025585	0.308895943991737	-1.88997886304782	0.0587607870393755	0.417640025002723	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19532350566749	4.72731805155049
Merged-chr6-119918880-4	20.7660992042232	0	1.27936556428443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87415542-4	9.95708293445138	0	1.28672913001266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75802094-4	8.38606344100205	0	1.28873274269518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-53483896-4	7.08622462534623	0	1.28769435101585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129495148-8	39.6825229200901	1.05656440177563	0.373939943065893	2.82549222506956	0.00472080336620199	0.062270007421848	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85724030655472	5.36271611214978
Merged-chr7-105651366-4	6.35262162163993	0	1.30101839977318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5097417-4	19.4543842798682	0	1.2874943519316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85002230-1	2.12483615263794	0	1.43703628808564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34416970-1	2.75828195617328	0	1.38562279928611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57530725-4	8.48597478421791	0	1.29761711172318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14132044-4	17.1820204469591	0	1.3046670486479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55272540-4	15.0042368788715	-2.94229398261371	0.564903995998047	-5.20848498764007	1.90388751961167e-07	2.11224845257291e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03785188849596	1.99834080004871
Merged-chr10-87688003-7	31.7289087022286	-1.65477933242808	0.387517305570992	-4.27020757173624	1.95291126422513e-05	0.000862995719490571	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26364449159995	3.36107877948042
Merged-chr6-98513460-4	12.2640928413734	0	1.29558449120662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5808011-4	9.6445553210954	0	1.28910065411751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165770409-4	7.61190024820245	0	1.30675629362054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122039776-4	9.57622669627252	0	1.29394781012778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109866520-8	77.164286296506	-0.814914433779421	0.312985578945944	-2.60368045238329	0.00922287018352089	0.104215402907203	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12918222468476	4.17237251232286
Merged-chr2-90583745-4	17.460604645109	0	1.28275854700364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191850908-5	22.0344523708304	-1.0839370083964	0.600936793969203	-1.80374545089337	0.0712712208274356	0.482206733201109	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6305859515007	2.5646301976401
Merged-chr10-94225576-4	18.0456693507316	0.0991736618965989	0.573761975265509	0.172848090622782	0.862770835052273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26627171604436	5.34592065321212
Merged-chr18-39737885-4	16.620672979043	0	1.29757488152063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97400518-4	12.0706235260015	-0.0138331011650698	0.750620126954746	-0.0184288972122164	0.985296699712688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81533712218179	1.57612722179308
Merged-chr3-90125966-4	10.8087931442739	0	1.29075717166554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99024758-4	17.4060937424003	0	1.29517546791123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111062664-8	43.2965300372419	0.383043890602341	0.272867682363945	1.40377155434423	0.160386887089747	0.869474159927544	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60660515106165	5.9176059531924
Merged-chr5-22898767-4	20.5998977478783	0.903426568735541	0.560604770878351	1.61152137060849	0.107066133147358	0.653680606993109	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92267543898374	2.95988517553914
Merged-chr16-32803750-2	4.5349568629378	0	1.32059593093037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8684107-1	4.60575622347837	-3.07593890839845	1.33408327850785	-2.3056573438495	0.021129786366915	0.195373693470775	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45870880827958	0
Merged-chr10-44634893-4	11.500082777684	0	1.28792172051403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84188425-4	17.0974351011241	0	1.28148253309375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111229268-2	2.66533188392903	0	1.43380615290962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76132226-2	5.45147145974797	0	1.36098957718029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95849990-4	14.8193317225836	0	1.27948601697428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56456150-2	2.83663350657732	0	1.46457583730689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-87924736-2	3.26166196450425	0	1.38972489091996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104366450-6	33.8969166418444	-1.72717506702184	0.557134715394167	-3.10010311563494	0.0019345328138642	0.0316747635316388	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66602093582557	1.86737052669785
Merged-chr10-122562705-10	59.7077601121919	0.358778902002206	0.194364278177028	1.8459096772681	0.0649053213047727	0.449290585379415	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5653273948143	5.89758902620912
Merged-chr19-11485421-4	11.2286405302882	0	1.30350308220866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69041777-4	8.51565834552458	0	1.29701347190961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150556560-3	13.1227527867829	0	1.28515650658353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70650575-3	6.6978038462638	0	1.30063425604917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67736798-3	10.1099395683959	0	1.29226481670311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55909681-8	52.6714467141251	-0.499953194159991	0.276544737836493	-1.80785647223412	0.0706288418345643	0.47891587615663	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95740120009074	4.29229813535165
Merged-chr4-135307111-3	9.89323945468209	0	1.306418585779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110764758-4	14.3162334003467	0	1.29471369913331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118152242-4	13.4157114202632	0	1.30023153392374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88433574-4	11.8981125123758	0	1.28360386878494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63921783-4	13.582339014768	0	1.28875854980085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131092414-4	15.7469650147834	0	1.29977298960752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46360466-4	11.5537176867456	0	1.28902603085972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44229614-5	25.4057172092954	-0.453438067986643	0.441707723588973	-1.02655680163878	0.304629204016394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47450454464554	5.14971552034457
Merged-chr4-16102220-6	31.0593414043303	-1.12195615113848	0.397040341199421	-2.82579887914954	0.0047162866166087	0.0622481246715637	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62396473341619	3.59365278618262
Merged-chr19-16170944-2	5.80028007925122	0	1.34830109522457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71006274-2	11.2861259345294	2.48977583864696	0.635533846377281	3.91761328344568	8.94300222206681e-05	0.00289444984251202	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30486885723606	3.42414620212235
Merged-chr15-62181764-3	6.28218425902039	0	1.32253090617921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20829519-4	9.70501084512508	0	1.29298235291828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86889754-3	19.32338348953	0	1.30991354191045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-147960401-4	8.39342972169747	0	1.29461482353238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68467688-3	14.8400752028245	0	1.31875746989456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52270604-1	3.10086616529104	0	1.43649991862694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43931057-1	8.02870981177516	-0.997944969592038	0.638442523202267	-1.56309289141111	0.118030747404536	0.701741171858503	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0944036761338	1.64730971531962
Merged-chr2-4460311-3	13.721480213273	0	1.29559886591138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114897498-1	3.92644083401632	0	1.34643665002159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91011093-1	4.66951604069147	-0.917874734611649	1.13270957052737	-0.810335463294713	0.417747398505261	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35605165622369	0.905469781553611
Merged-chr14-25378296-7	33.8510946874682	0	1.2743790765999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125461737-7	37.3421417399491	0.243892501123907	0.315489239174316	0.77306123581968	0.439486141027549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04667848180596	5.27660601597874
Merged-chr2-163928662-8	46.7654399863077	0.552362816422321	0.214737068034045	2.57227511523416	0.0101032570194072	0.111842695780143	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83598782810634	6.39792460458131
Merged-chr19-17295241-1	5.40578398378149	1.07417301224413	0.862390280695305	1.24557643597058	0.212919937713948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90094538361611	1.58148496924487
Merged-chr2-14324840-4	6.63925241661244	0	1.2996159518985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93357895-6	63.9496654017562	-0.690375275796787	0.190326242443071	-3.62732572731418	0.000286371935929982	0.0072112757322854	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.38455156332998	6.70235642387222
Merged-chr11-121713758-4	10.9080293858134	0	1.29045780869119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118379638-6	14.4351235428724	0	1.30144963672617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72303825-4	17.149881536699	0.949499271359469	1.08751148688978	0.873093556073587	0.382612085948459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	0.73596151290311
Merged-chr15-62003063-4	10.9094222549514	0	1.29214905425681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74638596-4	11.8308463694142	0	1.28449882242331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53816599-4	10.5827599143139	0	1.28839494000432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48127695-4	8.83215100941887	0	1.28669951705444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131892165-4	42.8605584645507	-0.720124672648492	0.55716336052515	-1.29248389910231	0.196189618276012	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10737765585744	2.08364730863447
Merged-chr3-106553640-8	41.3131490087515	0.891003420027678	0.267726711171815	3.32803333715878	0.000874613997086361	0.0171371892814409	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34798426711257	5.17512451777475
Merged-chr10-67717698-3	6.54990782821428	0	1.30787316569524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72836064-4	8.19688383188605	0	1.29536455347849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45893908-4	7.81515130258455	0	1.29734315298105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60530229-2	8.01443552055498	-3.90593168535279	1.0361783128828	-3.76955552610044	0.000163538524100438	0.00467889159188583	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72418753322557	0
Merged-chr18-65053975-4	13.8803336591918	-5.67910668155821	1.07004723486121	-5.30734204672264	1.11235324146407e-07	1.35865111993852e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54240113685311	0
Merged-chr12-36364521-3	7.36429762571335	0	1.31264717899544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111967254-8	35.251899604869	0.640828223963415	0.305634633054411	2.09671337819013	0.0360189555153201	0.293149167655263	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1825580218747	5.74468710003746
Merged-chr15-79446422-5	18.2544116890112	2.19052865510281	0.56982761209901	3.84419534713982	0.000120948634749933	0.00368461980716509	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01502436350874	3.46380899332235
Merged-chr9-120055008-8	38.8580149799337	0.0914313883066553	0.270923384132224	0.337480607661509	0.735754628435871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90323850877531	5.03164715831338
Merged-chr14-26441247-4	9.49804546247381	0	1.28979537192478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36649925-4	8.36527963760546	0	1.29498532697659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79725095-4	6.88253806375977	0	1.30483536562031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35066731-8	31.7859284283871	0.207584786965384	0.308067087270507	0.673829810268267	0.500419520228494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56204088680976	4.86232956077058
Merged-chr16-95752688-4	9.89442844611188	0	1.29344020990363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43573879-10	89.6596605072295	-0.325152231365712	0.199568008021684	-1.62928033700864	0.103253686742506	0.636687893439036	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.3159779865476	6.00060032335612
Merged-chr17-47250131-8	37.5408782009074	-0.759546167734426	0.308624867693687	-2.46106599708058	0.0138524881777402	0.141261895936618	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33538344451075	4.07101038565259
Merged-chr3-87515902-11	130.961741169725	0.155829225610634	0.141914015211501	1.0980538136307	0.272180991540104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.16389691645991	7.32076726709445
Merged-chr2-30604932-4	10.3363637461716	0	1.30445586256373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26887109-7	23.7436469148153	0	1.27792343541627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35541924-3	21.8546021484236	-1.56459614950156	0.64780810742103	-2.41521544972681	0.0157259045804556	0.155371176400733	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74755946295533	1.97799227303783
Merged-chr12-35418073-8	52.6931392624471	-0.831676838970535	0.265121489777146	-3.13696501807386	0.00170706493485498	0.0286760579005227	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9361807419392	5.04563641278567
Merged-chr1-43735506-4	7.93758075198458	0	1.29795998023992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123354558-4	8.98708554726194	0	1.3485107425682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21412805-4	7.88742086880595	0	1.28866730514373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57504920-4	11.3655818547597	0	1.28505230151355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17467010-4	20.7541681801645	0.00487722250615548	0.342051950643171	0.0142587185864156	0.988623574076567	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27248563270542	5.23968746411906
Merged-chr19-21843192-1	2.00684077822942	0	1.59609032479748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94075034-1	1.99685700614307	0	1.45589592350738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118106930-8	66.5037202464606	-0.665548990332323	0.227847975246713	-2.921022184251	0.00348884983666809	0.0495829450689241	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.05186840519494	6.37101894190481
Merged-chr15-28159100-4	10.7307722867875	0	1.29992465855654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67081802-1	3.01234049952989	0	1.37327994257601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62681583-7	36.1912616215568	-0.594771504621572	0.369116298804427	-1.61133904557465	0.107105844852588	0.653739822318067	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57974719300534	3.98326479814294
Merged-chr9-107597676-3	15.9506468178836	0	1.2948549579858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161424765-1	3.80643630244139	-1.23037798121756	0.965354377027047	-1.27453504173948	0.202473862055134	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27472584667138	1.48219169541115
Merged-chr14-70987937-1	2.61499889659609	-1.74027248030482	1.2911333826515	-1.34786421270508	0.177702060311923	0.93555581962157	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12017890782088	0.306240821987646
Merged-chr19-53535629-2	6.24093093812679	-0.668646259129315	0.913536105607893	-0.7319319455736	0.464210106631724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03317952154502	1.04220233489076
Merged-chr15-12014270-4	15.0902962482722	0	1.29044028008567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110891749-5	20.5103306962304	0	1.27852921065056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23769231-4	10.8728522453196	0	1.29677667576441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90595143-1	3.60116032171123	0.132177372394912	0.946002422657274	0.139722023146233	0.888879625139052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6128084282394	0.958904680953568
Merged-chr9-46117000-2	3.87195269031385	0	1.42506602131257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70445608-3	14.5862770613852	0	1.30496338372429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68195555-10	57.77561142344	0.577862482167941	0.280939468247638	2.05689320113106	0.03969650012414	0.314806735086414	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02582192091179	6.52536296527585
Merged-chr16-57189704-7	40.180132650621	-0.727449511227862	0.285890888412712	-2.54450050950107	0.010943415210655	0.118907284728211	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55825050242275	4.83266323700526
Merged-chr5-118647621-8	65.1290479081124	-0.531177052802276	0.202157274757122	-2.62754359664003	0.00860038204464108	0.0986803856374778	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.7181038275972	6.19193226661356
Merged-chr6-34359241-4	8.80035424644629	0	1.30198645644249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55508889-4	18.9748201282619	-0.000896713694954411	0.35444637232098	-0.00252989948544984	0.997981434413445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12540124381554	5.17557396944286
Merged-chr9-116161144-8	37.0215580286442	-0.638784948535153	0.297043265158226	-2.1504778039485	0.031517439857555	0.26598716581839	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27580938857735	4.59635069773661
Merged-chr8-86893822-4	16.5565479776672	-3.85010525050284	1.02726374465218	-3.74792283923779	0.000178305084921977	0.00499636538563959	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87857343430224	0
Merged-chr17-31021051-4	14.8619204602622	2.6900402688543	0.889058093418908	3.02571934136458	0.00248042423673251	0.0383272173500881	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.67756367980613
Merged-chr18-58568515-4	10.8714880499017	1.87939198265511	0.961360293113675	1.95492990101359	0.0505913447250113	0.373975340769298	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.46928333126936
Merged-chr18-79590641-7	26.6907107648313	-1.08792193049352	0.441213709114077	-2.46574824857093	0.0136727393793458	0.140150404311017	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96583961103483	3.46791040580188
Merged-chr1-87112109-3	10.0770102048474	0	1.2968368057261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29500516-4	8.13824450194415	0	1.29529652503965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51520527-4	13.7665070870905	0	1.28407619784959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115582210-5	23.3739818646865	0	1.27888301747287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34105013-7	27.2359702833628	-0.181774189075971	0.337268729434025	-0.538959509768393	0.589914793449679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42978458588061	4.27355692396087
Merged-chr15-74931822-8	50.3840856864784	-0.319839345960785	0.25778520053572	-1.24072035670049	0.214709071516217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84176496078844	5.43495328202506
Merged-chrX-75104244-2	6.65079687830632	0	1.29957126408449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119347676-2	3.91680449056292	0	1.31560228830388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99072718-4	11.4646509264412	0	1.28904505766825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21403032-4	10.4486788731195	0	1.29030018543789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3981613-4	12.1949603741889	0	1.29026739816101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115319838-4	11.1687754401515	-2.12712705967454	0.997145763949805	-2.13321576100244	0.032907030788728	0.275085433532073	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1409329367044	0.469435083901436
Merged-chr14-55778119-4	9.4889580661796	0	1.29726738822917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56183548-11	102.667493739595	-0.694131825128092	0.239079728757255	-2.90334872277217	0.00369195286685251	0.0517158310905346	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.50335636369528	6.75657843046156
Merged-chr12-26391273-3	11.5806944215993	-3.20289640436006	0.684209346254619	-4.68116435692205	2.85250125440516e-06	0.000185472186040159	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7122189305466	1.26501898168246
Merged-chr6-124688438-6	20.6093763974753	0	1.28088798878413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41960029-3	8.729746214529	0	1.30188012609654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54902412-3	8.06586686336506	0	1.28669853992436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-26866805-4	10.1121255421046	0	1.31550492081719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115722430-4	10.1957971385805	0	1.28392337393578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144039667-4	14.7255944332081	0	1.284436622722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111031650-4	13.3887709476522	0	1.29823819601117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167906950-4	10.7871813354209	0	1.28693460234828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65680308-4	9.87849730146744	0	1.29280674565353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100600568-4	15.2816169246131	0	1.30252878000629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60388560-3	6.13816413566808	0	1.31588254267283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101093390-4	9.83606283459016	0	1.31054074642214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128709625-4	16.4290895561207	0	1.29302852187776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79059500-3	9.05498430923846	0	1.30627810295554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4190587-3	6.39200736532131	0	1.36483998399517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34034479-1	8.29888130050631	0	1.29058236235398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101997161-1	6.39864326371425	0.959034747987981	0.75337741482605	1.27298048642647	0.203024966364608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46454468718192	2.79247632064346
Merged-chr16-87654405-4	11.4352049133391	0	1.29241405270279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5320357-8	37.9024494808543	-0.442638586966691	0.261508247937125	-1.69263719388734	0.0905245468327848	0.575261794936804	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25479329264913	4.83868006460762
Merged-chrX-139552295-3	6.26688913574273	0	1.32938315121187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44652195-6	28.6869439842659	-1.93753284190523	0.388271591024147	-4.99014835670718	6.03329373012261e-07	5.38918375746133e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39859045541043	2.77285250524885
Merged-chr1-124073282-8	59.9910899834705	-0.263766564282662	0.271324627473479	-0.972143836476636	0.330978996605005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97887339145631	4.7588983669325
Merged-chr14-19971043-4	10.75727722082	0	1.30844726962442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11542824-4	8.00784052685114	0	1.29052274733264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109480067-4	10.7179871490121	0	1.28600958618313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24653281-4	12.0097714669648	0	1.28945223070547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43673814-4	7.91812660328909	0	1.29888190073173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33248762-4	10.6925710063155	0	1.28762408448591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93477060-8	49.3362095126882	0.6223479564714	0.240708524161116	2.58548366178689	0.00972424813815435	0.108640916196928	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3711325027865	6.0131171667793
Merged-chr12-70010462-6	19.3149714018623	-0.489152653372064	0.461137651790914	-1.06075192835013	0.288802653920049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54933046533955	3.2180769473006
Merged-chr2-90483920-2	3.63143284089565	0	1.36088087247869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44528127-4	12.9777399872178	0	1.28866176745998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20773353-8	30.3714980808583	0.285854248932443	0.33058866226034	0.864682554380318	0.387213047309103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40944358458411	4.44075696090428
Merged-chr7-25726157-4	12.045053365346	0	1.28691238478873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101906576-4	10.8808333782378	0	1.28825676662237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120835163-4	11.5859680915627	0	1.28521912115857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32932706-3	11.8913658489413	0	1.28838293597674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16104427-4	8.77425696742243	0	1.29647411967708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93128067-2	5.9657196154845	0	1.30257079369206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76377943-4	9.62775190680021	0	1.30276821573543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59560016-12	57.1545395125474	-1.8225628638669	0.351502207272765	-5.18506804838522	2.15936007271367e-07	2.32847431207174e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48361192325184	3.86957060418523
Merged-chr4-63765226-4	12.1632747147266	0	1.29362550391202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152402151-2	6.96732275421025	0	1.30680153995032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194962406-2	4.93374393010532	0	1.31884036268598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-59179264-2	6.62092311201893	0	1.33185533351554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78334565-4	10.3619169851178	0	1.32348306790151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9493923-3	14.5287538319141	0	1.30858325492725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105898571-8	43.6132783331441	-0.080267771043595	0.280218500835747	-0.286447078990851	0.774535720756288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01908968457469	4.93309447439465
Merged-chr18-64958315-8	33.8656178508497	-0.318572400178683	0.272106791035523	-1.17076240165243	0.24169429459538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44001868112319	5.06461432592716
Merged-chr14-102867864-4	9.83667875640772	0	1.29933676502201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79613912-5	21.1206415422995	0	1.28015912928307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95650800-8	73.8834818484049	0.614518755878557	0.299084671792908	2.05466482850736	0.0399113893074676	0.315963168679912	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37584614282872	5.05910871902755
Merged-chr3-50406117-7	41.4834661808042	-0.0101701862489071	0.373798294291822	-0.0272076850114445	0.978294086223715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93792738139691	5.78022955388949
Merged-chr10-20653483-4	10.334074913357	0	1.28362896212554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20056493-2	6.24225531206975	0	1.30750976338933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62206195-4	10.4698764341288	0	1.31469518270648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69424063-8	55.7262507772849	-0.715817635328886	0.240702269921629	-2.97387156158499	0.00294068136276831	0.0438025448669839	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57438073706523	4.84871910493308
Merged-chr6-94163262-3	7.84984699152166	0	1.31890041035724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136230818-4	12.8744145520004	-1.4018560494637	0.903223983699991	-1.55205804403145	0.12064833577019	0.713280208924169	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04826825114985	0.73596151290311
Merged-chr17-85574153-1	3.16654317668745	0	1.42985632738988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132151180-4	11.18204933048	0	1.30051036523131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122642310-2	4.63428320561358	0	1.32460163883895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45266599-12	50.4752102808379	0.717523539968078	0.266866417890741	2.6886992587499	0.00717310110287379	0.0855330755758834	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15436792445432	5.69111077663767
Merged-chr10-118370643-8	35.9567676798154	-0.1255682587669	0.2563246008419	-0.489879856847412	0.624218917604318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48904442036075	5.31263828349674
Merged-chr1-66649800-4	14.7689454389568	0	1.29090218793866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6163247-4	10.6638420424547	0	1.31540555339134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94588266-8	74.8145794639862	-1.07252219974439	0.253362735064507	-4.23314896514408	2.30441755227463e-05	0.000984855914787038	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96238846312839	4.84143532587723
Merged-chr7-118699052-10	90.0110231133936	-0.326676748852132	0.246155950352972	-1.3271129476403	0.184471322929026	0.961280946421062	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.97931687541957	6.63577501136479
Merged-chr3-97681235-4	14.3984816727407	0	1.28975444433881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112361807-4	12.9985672497106	4.42659513120215	0.968348425050603	4.57128345199801	4.84746054026242e-06	0.000282823353985704	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.62358588376636
Merged-chr12-99264594-4	12.5911445906665	0	1.29248405884488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67715218-4	18.0574693205156	0	1.2866736101446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90873257-9	83.0114661925662	0.52374360247961	0.247015076065412	2.12029002772655	0.0339815941331052	0.28126171630423	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.74103804430362	7.25310321926088
Merged-chr10-118121280-4	8.46122101833006	0	1.29531584794657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80425724-8	39.269943188384	-0.778070673801361	0.295537456601559	-2.63273116967488	0.00847013601481319	0.0974453359197153	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66032566440989	4.90300831114503
Merged-chr1-55576177-5	23.9580400607638	-2.17235335769165	0.486043770626977	-4.46946034281933	7.8417196148271e-06	0.000416150806834497	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24821941171182	3.0849014692737
Merged-chr10-86883486-4	10.6777498763236	0	1.29115683183658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23844835-5	18.2897331470541	0	1.28650239613543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118619101-4	18.5839496469236	0	1.29001797959819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112278354-1	1.51435890914825	0	1.53963971226275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100641305-3	6.41698883142561	0	1.3244192716692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-76409583-3	8.20087802610431	0	1.31808525151364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111132230-1	1.73364420665123	0	1.37460906979224	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69017592-7	36.3064871488832	-2.15724212011416	0.362318706289782	-5.95399045830331	2.61682066332022e-09	5.58819487141578e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44037637014612	3.17584449923301
Merged-chr12-32164423-2	14.001327074073	0.457995482505074	0.600323069989267	0.762915012600235	0.445514082358935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42481542454262	2.35651348678689
Merged-chr2-148857680-1	2.10723457085679	0	1.59031607893248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140597320-4	15.8711638881193	0	1.28624861334762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62911088-1	2.41916937320249	0	1.48106091892518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30725082-4	15.3997827675976	0.312144188136269	1.03727556360451	0.300926965879322	0.763470187044824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716345901999145	0.683637474991079
Merged-chr19-21476954-8	42.965162012716	-0.78339392801722	0.328672609006527	-2.3835084109539	0.017148492590285	0.166160349466899	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49975694294111	4.65192831265297
Merged-chr17-65740982-2	3.10957748840827	-1.37878020295348	1.49557846110299	-0.921904292427851	0.356578499980058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0
Merged-chr2-167377892-4	10.6375644647748	0	1.28686015908112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118483484-4	10.940796501174	0	1.29681416751329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34072538-8	58.655635035416	0.0653404472131719	0.281124273620283	0.232425490590783	0.816207552324149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92370600644923	5.00340788918465
Merged-chr8-67950417-4	12.0454475454826	0	1.28266356661406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90657666-4	13.2882747737717	-2.60228899476738	0.583814024082458	-4.45739377168479	8.29621254734379e-06	0.000435091737655479	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20078479275975	2.34492028387591
Merged-chr12-17748250-4	13.6420087287453	0	1.28226746946978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43384537-2	5.72913794420311	0	1.32780961754778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57749045-3	5.91706499015947	0	1.31654506881762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13603314-4	9.17752594970849	0	1.31287251866314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84256475-4	14.1678805365012	0	1.28729618523882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136569743-2	5.99265018193547	0	1.33667969436355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89905215-4	8.68114415013093	0	1.29198854657199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144932585-4	9.34111949751222	3.15623537878879	1.08452936463066	2.91023505837822	0.00361157022952485	0.0507858119686961	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.898163539755574
Merged-chr11-34776164-4	11.554683084459	0	1.29422664637393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28292913-4	11.0258323435388	0	1.29755692493186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17960822-4	9.91361378398172	0	1.30116056487215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22353827-4	10.7699535486853	0	1.29808249172705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34607991-2	5.62884616082594	1.91404790987402	1.03884192379693	1.8424823508068	0.065404625805885	0.452028628018124	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.7204458171722
Merged-chr15-64095449-6	21.7551518653063	-1.78961386192825	0.422198830817914	-4.23879397880208	2.24723767329645e-05	0.000963569507868962	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83154018678543	2.77185435753737
Merged-chr8-71603140-6	87.5369373203653	-0.83268626563081	0.307424801808983	-2.70858519134118	0.00675707621315057	0.0819881894938632	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05457733331235	5.18080866879963
Merged-chr4-6373152-8	38.9992040223612	0.192955137060839	0.287285374063926	0.671649706113834	0.501806726434423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68638219454851	4.87643442704165
Merged-chr13-89889212-6	80.378614247914	-2.26235001799483	0.517153751714321	-4.37461782012666	1.21645408338856e-05	0.000590156113082562	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39334046433867	1.26927213904674
Merged-chr17-71265877-5	47.8753178610193	-0.0979768906240264	0.223563156667673	-0.438251508363112	0.661203973563066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55855408478717	6.44304679440787
Merged-chr7-112299875-5	20.8820486833219	-2.10786835403882	0.466185252555755	-4.52152517155554	6.13956574231849e-06	0.000341734295568607	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00081597418397	2.41772268080239
Merged-chr16-44242776-4	11.626238187166	0	1.29207940000362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23057045-7	27.3344148216452	-0.592196011695994	0.490093225868471	-1.20833339544041	0.226919047857657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94519051354534	3.54054682698176
Merged-chr4-59553732-3	4.58482849375052	0	1.34860150275514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32459551-3	4.71404570063615	0	1.33788744736488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5402835-4	8.14082622755186	0	1.28817940424548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115985649-4	11.6022373605318	1.86754261016819	0.967214912235826	1.93084555101736	0.0535021553348011	0.389413214803733	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	1.46928333126936
Merged-chrX-163897549-2	7.12858215425778	0	1.31057592500618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59265838-4	10.629934714942	0	1.29042082755899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102986578-4	8.92405912874596	0	1.30345641001149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9020442-13	227.654165544088	0.0170296262140966	0.144830212651996	0.117583381963375	0.906397772864534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.74012044888671	7.75913285014489
Merged-chr3-81054203-6	33.0785382036393	-1.54291339340523	0.483487971417097	-3.19121360740985	0.00141676492449206	0.0248336697306486	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10685666164831	2.18907334447161
Merged-chr4-45452682-8	48.4954748561253	-0.0535652537724716	0.290772202990355	-0.184217243675966	0.85384303248014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81117569331398	4.87648470256751
Merged-chr8-119824254-3	9.82463312788688	0	1.30081540275798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145746800-3	4.41265585499069	0	1.36856469932998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95533555-4	8.6674748179266	0	1.30450094718932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25592027-2	5.94631671552952	0	1.30096065247593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162665276-8	31.9783970426955	0.685122037812994	0.338623792489604	2.02325428102937	0.0430469378850024	0.33312417925963	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88583425697356	5.42475253971584
Merged-chr1-177711189-4	10.3165047665615	0	1.30549790075808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45858247-4	13.6312332299059	0	1.30524017898845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45489848-4	12.6393645650914	0.947091920625071	0.490711131682305	1.93003960879827	0.053601930219513	0.390006803957252	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65461840684403	3.49403072782279
Merged-chr9-40415253-7	49.4711154271742	1.28619377140142	0.291266179467929	4.41587064365309	1.00604235980687e-05	0.000508043617031993	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58704866553796	5.69486760178541
Merged-chr8-122145042-5	19.1269819718698	-3.52040775601883	0.844886812989098	-4.16672115352836	3.09012102152707e-05	0.00124186376551481	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1647549262986	0.683637474991079
Merged-chr18-65679527-8	40.9150606858649	0.550367893849787	0.263720043121886	2.08693995092144	0.0368935629714026	0.297819242239564	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41453841201268	5.95422675142581
Merged-chr3-103846201-1	5.97288324142958	0	1.96807908064828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25553202-4	9.00546949831642	0	1.28735732373243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20741060-4	10.887339170153	0	1.28692303278718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131272497-4	12.8331546923635	0	1.28931653480142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116083421-4	10.13271307805	0	1.31172115039842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182983137-6	30.2181761882546	-1.00702182999485	0.282031717033519	-3.57059780576086	0.000356167429254757	0.00850662164915254	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45592898029146	4.43399273854488
Merged-chr16-91561741-3	11.1472826491154	0	1.28921325111256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36236626-3	7.03275776585664	0	1.31875369222247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132555167-3	7.15226313685056	0	1.29895080725169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60492396-4	10.1772480253747	0	1.28955555650758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28697502-3	8.51484411859816	0	1.3442661517443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18699504-10	49.5620865733392	-1.09085495829172	0.361170137001645	-3.02033542237948	0.00252494888925831	0.0388315627482875	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81744594642607	3.7396795010132
Merged-chr13-99221008-2	3.39504301417238	0	1.49064553432658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128529118-6	16.0829239709853	0	1.28056984304465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164087333-2	3.43516375969333	0	1.35800482384381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51768888-4	11.2625704583064	0	1.29268853655137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12439729-8	35.6117495724487	-1.23175082046536	0.301168102713518	-4.08991128000379	4.3153822531419e-05	0.00162158118869356	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56623728946861	4.38213638237152
Merged-chr2-92058639-4	8.4303378465215	0	1.2889796865142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82953977-4	8.73078974649083	0	1.29173353004576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98860371-6	26.1547157423715	-0.138722287070863	0.288833081480847	-0.480285313439976	0.631024530509109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83697472746986	4.79602565204476
Merged-chr1-136194583-4	11.6217646418842	0	1.30953592773049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4294666-3	14.4832127700289	0	1.32888060266048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118459208-3	10.5295633510156	0	1.31385040730179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8917385-9	165.032932083072	-0.258767168464891	0.148752781283538	-1.73957869044246	0.0819330237254599	0.534181235737375	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.38307850310455	7.13958876757662
Merged-chr2-181193211-4	9.97268853540885	0	1.29949949832917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113013475-4	17.4998148533589	0	1.27709342719896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38200429-4	13.9825220588718	1.52298088140851	0.516474887157971	2.94879948527427	0.00319010881458848	0.0464692043241415	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2504101886461	3.592484606407
Merged-chr10-67049443-4	6.86812133279362	0	1.30435447204407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43546205-4	11.8021623092965	0	1.31122890935688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54956659-6	46.4338889058287	-1.09964019212271	0.389044465971699	-2.82651544567325	0.00470574745778578	0.0621466801488419	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38652453504613	3.36906859149664
Merged-chr11-83271729-3	8.71046086720458	0	1.33065067431535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102031154-6	41.850104932436	-1.71656609574185	0.450441905525559	-3.81084902333638	0.000138490331878117	0.00409944153627751	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47932463401022	1.49644819499981
Merged-chr10-86990767-4	21.1468361931966	0	1.30591485812079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114317581-4	10.3090697695474	0	1.29428859840182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172370169-3	12.9633944541706	-0.481994320260709	0.47903965862346	-1.00616788523468	0.314334817732527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44358229864817	3.71524349300644
Merged-chr15-64085989-8	37.9371238677232	0.184689292889014	0.322837673278593	0.572080981173582	0.567267113243007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28021369402501	5.35455414905337
Merged-chr16-30510868-11	72.1584316728068	0.743482904252113	0.191446087478554	3.88351056970751	0.0001029590540704	0.00324551970443048	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.36666244433148	7.07991136644479
Merged-chr10-122722287-5	18.7921531285385	-0.975674513888067	0.509623923896843	-1.91449904162184	0.0555564214712597	0.40061685251169	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64750192013084	2.86005973207258
Merged-chr3-27656942-4	9.77854102051283	0	1.29713606564728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165651377-4	13.1538260404825	0	1.28983074068279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25083986-3	7.57973810776521	0	1.29852361623914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86168006-3	16.0495491953925	0	1.29272529648891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94665427-3	11.2665028186008	0	1.32889733837764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70856131-4	9.3743096375084	0	1.29511179318013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59856965-8	70.9536877016819	-0.396841272803383	0.227044407912409	-1.74785750704981	0.0804887044699343	0.527332552866686	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.79019523884455	6.39446511560466
Merged-chr1-24613094-2	60.9229702809182	0	1.74573857728163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30467537-2	9.64479116431843	-2.47130392851498	0.961765824936077	-2.56954849552825	0.010183113780821	0.112440985657575	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14956382755297	0.851599296279844
Merged-chr6-128065449-3	15.0346375027296	2.91542559086245	0.99113213871248	2.94151049793391	0.00326615771634257	0.0472976125646019	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.73112371204221
Merged-chr11-5288482-4	12.8038551230431	-2.81054041576947	0.745683463487339	-3.76907971463576	0.000163850556829288	0.00468576739018235	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38341093965021	1.41695929335733
Merged-chr7-90042639-5	25.2270906109013	-0.405882870434129	0.481356811322971	-0.843205831696017	0.399113337475868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76810920425099	2.47394001682376
Merged-chr4-108318845-4	8.28552036712748	0	1.28877481255013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12273121-2	6.225321709567	0	1.30023812135559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134554622-4	10.933593933152	0	1.29172239897885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129498035-4	8.31549402609291	0.141822166002839	0.696424758731412	0.203643199390524	0.83863233221486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98165298323401	2.08137696679909
Merged-chr11-93736826-4	11.3881953106415	0	1.31741901860616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36001078-4	12.2571114969494	0	1.29494945723732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118312448-4	15.5800637895024	0	1.28937465925204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-110040542-4	11.7938656235899	0	1.28325715913023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99823560-4	26.2803810612104	0	1.29474006096885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72261461-4	9.6548827323027	0	1.28955201645233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63642738-7	32.1102727571129	-0.861490224059234	0.404678877481382	-2.12882429006656	0.0332688004930036	0.276940514269531	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25811747423783	3.00026769284093
Merged-chr2-75734309-7	26.4333201266188	0.46963632255325	0.35823135043464	1.3109861043246	0.189862458313877	0.981391567867315	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60041515591378	5.07057857965242
Merged-chr10-122794634-6	15.005365371065	0	1.28092776423608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122585548-3	10.0584349130814	-3.199858543759	1.11683892239065	-2.86510299704593	0.00416873627329724	0.0566930781508598	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65632028315747	0
Merged-chr1-162517950-3	13.442930727589	-1.78582518239896	0.934642216694055	-1.91070459957998	0.0560425533946307	0.403401981917658	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4146920728665	0.73596151290311
Merged-chr10-41615626-4	9.66319106037536	0	1.30049021023154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142748472-4	7.44257419025274	0	1.30489261188938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52100667-4	9.15860882278288	0	1.31293210601475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9676456-10	90.03834760246	-0.2613039045514	0.187086039921297	-1.3967044503231	0.162502465374429	0.877094021922121	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.14958760962801	5.85211114930159
Merged-chrX-19157608-3	6.97055763738802	0	1.29859564564369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59906409-7	30.7628505118928	0.829768876071209	0.330355229521673	2.51174736138624	0.0120135058743066	0.127440674490656	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69678533449424	5.32302366828877
Merged-chr5-134607329-4	12.0367536682851	0	1.2868704393213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13647842-4	14.3101542011448	1.0247918747526	0.660179021454674	1.55229391036165	0.120591914356285	0.713011150518075	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77475079233141	1.77743761853437
Merged-chr2-35718271-4	11.4671271919434	0	1.29548154918607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93435139-4	14.5628798878755	0	1.28249109175426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87421972-4	9.25626460477903	0	1.2940465621492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66105575-4	10.9923855192705	0	1.29507392271619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8924518-4	10.2238608174961	0	1.30209508510966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109120035-6	25.0102144133187	0.234029336090374	0.320185674924965	0.730917571953268	0.464829502202513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7778223134086	5.02451126778241
Merged-chr16-24193607-5	15.7893776316533	0	1.27846927645755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12230368-4	7.92505094122726	0	1.30180075582083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29536947-4	10.7680937582027	0	1.29536801273127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124642361-3	7.38706847297636	0	1.31491897376763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17002822-9	73.8484271658396	3.57923206071193	0.616953972924444	5.80145718771514	6.57410829522245e-09	1.2483240759146e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.796855916231748	4.09375172726452
Merged-chr15-8224459-3	7.18587828983462	0	1.33061822766844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129604307-8	78.7207026329651	-1.91635109248952	0.230390233996898	-8.31784863118511	8.95743068935798e-17	2.31455151979327e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.23032754829334	5.3230335299022
Merged-chr17-37203780-4	11.5868114836266	0	1.28664519359945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5734559-4	12.0598182864292	0.182423459292882	0.825147215485171	0.221079894435105	0.825030224859334	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1441778002096	1.29606516661881
Merged-chr1-138248273-4	9.38371682926634	0	1.29569058830039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76562331-4	9.81022007978429	0	1.30587674018675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145881230-7	46.6928758818646	0.211859068685372	0.329890184520181	0.642210889037263	0.520736263788901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31342861880209	5.32264519661947
Merged-chr6-72113463-4	10.6085702686462	0	1.31722989605612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123572122-8	44.4547661563178	-0.152073078639717	0.257000051867912	-0.591723921977557	0.554035474847456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93727990968668	4.65482695834877
Merged-chr7-130968680-4	19.666807282779	0	1.29162933172685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34167176-4	15.5490074683309	0	1.2910244584985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16920734-5	31.5305769567192	-2.24073587956098	0.304189975674416	-7.36623839951685	1.75509843774028e-13	1.61533327482502e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12424105180761	3.93216555221975
Merged-chr13-37498192-8	59.5960486817458	0.189976986301354	0.203150797559288	0.935152549651746	0.3497096881657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70103453413804	6.89166618446128
Merged-chr2-75590361-4	9.03142859323496	0	1.28530171950386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180983246-2	6.34447237623809	0	1.29212696074331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90902202-2	2.65796858869109	0	1.52811176093513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39737432-4	7.98933840564642	0	1.30803443840509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84778978-1	2.47764723240482	0	1.41255499232975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49576494-2	4.21131165792032	0	1.34949035624305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148693814-2	9.41232430022685	-3.6323694296929	0.630155210842747	-5.76424564487074	8.20238766734444e-09	1.50984006904307e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3173079839433	1.35032549026822
Merged-chr9-31174822-1	1.67876553401	0	1.52878184689623	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-171358515-3	7.59398368705762	0	1.35162208376559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10961395-1	1.45208814132032	0	1.64372011525507	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6060803-1	2.26297759344271	0	1.51167941411274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101155294-4	9.14864719013467	0	1.28551466053583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180841653-1	2.29651470132426	0	1.35445551692602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135710465-4	10.8251242507079	0	1.29023667716619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74258832-1	2.41515480202454	0	1.43125406926732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106039768-3	6.06519238484521	0	1.31452722462665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90650162-3	9.55486670679526	0	1.29816831583883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80644207-1	1.94224579182857	0	1.58420879193603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109239476-4	10.4310530432507	0	1.29361097979217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40414605-8	27.0250433743725	0.0793365882129541	0.305706868644448	0.259518500728312	0.795235209354364	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88882660574316	4.95377640849053
Merged-chr9-102913775-4	7.6994694909343	0	1.29733744655813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39523902-8	31.9788487927103	0.41505638237419	0.346914667188047	1.1964221223002	0.231531872633857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23346929732555	4.96151321953702
Merged-chr4-103322013-6	21.491670578516	-2.03915950284493	0.587462907583463	-3.47112894537127	0.000518275060407939	0.0112890673658057	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32109161724161	1.05016208779462
Merged-chr10-78367187-4	11.2295988279023	0	1.28947780317813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12249749-8	29.7247980790763	-0.437944879238293	0.30717090479601	-1.42573685332968	0.15394431443438	0.844993294500543	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8766512097779	4.36126942607199
Merged-chr9-122122320-4	11.8240586088426	0	1.28290480085811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103900184-4	9.52098629004223	0	1.2947411952448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117048614-4	12.3244841024859	0	1.28841489590844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43808171-8	34.9004601789666	-0.653495016922461	0.287370203619625	-2.27405280259137	0.0229628119579374	0.208870811553922	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32393924730167	4.6918887260565
Merged-chr18-12731559-3	13.6280732823481	0	1.31786170031674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38427676-4	11.9023012653134	0	1.28409652365751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57424383-4	8.53484068574458	0	1.30417663040316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116642135-4	9.74963769903084	0	1.29964174909656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10328617-2	5.86703908056476	0	1.29601620768234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21607108-2	10.0448480685333	-2.36132602867296	0.788975932456948	-2.99289994983695	0.00276340324015519	0.0416845217292661	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0250048637764	0.735627456805112
Merged-chr14-102883998-4	11.5194730997506	0	1.29352313139741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55388283-4	13.6585929177341	0	1.2970084552825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47636701-4	18.3522949887812	0	1.27877054812917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48434884-1	7.84953724726924	1.24295711218116	0.838909979611426	1.48163347962184	0.138437845674592	0.783641672163191	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4212902462723	2.52675820545023
Merged-chr1-157380918-8	88.5655363990196	-2.21268034720989	0.279330094791844	-7.9213818649178	2.34885356242897e-15	3.74361426562154e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.55737248312257	5.29782713772255
Merged-chr10-37192240-7	20.4003917455042	0	1.27922211762448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62043936-6	26.3674716509331	-0.30843126477867	0.431260794455946	-0.715185031293581	0.474494717171947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54128997815077	3.06657444342941
Merged-chr6-125279921-6	16.9793805262546	-1.92185642357148	0.60659814598572	-3.16825304575975	0.00153357975769641	0.0263997109711353	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8093699567782	1.85297260998396
Merged-chr16-76399858-4	12.3428780854244	0	1.2948044074369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154935241-8	44.7487134385774	0.0628108268510864	0.26217554419016	0.239575460957292	0.810659390135287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19363993993426	5.21174931318451
Merged-chr10-7600805-4	9.48048987626302	0	1.28918208186352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33261556-6	29.0376248389218	-2.13927409584051	0.613552096334766	-3.48670326223331	0.000489013617466423	0.0108102448738027	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92280535170604	1.31495854024319
Merged-chr17-87602346-8	30.9976671297166	-0.424932173003386	0.272909497596844	-1.55704428297734	0.119459972018653	0.708176660757586	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45521079265266	4.9536996629991
Merged-chr13-109406523-1	2.8471718298269	0	1.37093553501739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-38724215-4	8.98386803091547	0	1.29396891299308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108371700-2	6.87893460344733	2.00404978641616	0.989800081212372	2.02470157808178	0.0428980164951304	0.332370617250509	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	1.21653520045322
Merged-chr15-62166000-3	16.6684027089573	0	1.28375305566753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26439525-10	134.056922162492	-0.854986229110261	0.217648203490412	-3.92829444672133	8.55504280130234e-05	0.00279239673773178	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.02256476708201	7.14906781619545
Merged-chr11-89021591-5	28.1335117677478	0.544921288585523	0.400443311940769	1.36079507969439	0.173578457265716	0.920605761278491	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47297745526381	5.95750966338805
Merged-chr4-133775029-12	59.2574761380258	0.603866201777485	0.228470957095522	2.64307643060738	0.00821564874820063	0.0950026160148502	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48246647886014	6.06539178333895
Merged-chr17-23985194-7	48.6241325443246	-1.80116875825441	0.356674072413594	-5.04990100924915	4.42039069939468e-07	4.22920718364048e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32305382084412	4.47954644595998
Merged-chr4-133167118-3	16.020996789798	-3.15460152715578	0.58079425965166	-5.43153014123763	5.58728761572445e-08	7.60639367785687e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05501343513445	1.41926493179619
Merged-chr1-131339892-1	4.20739119445312	0	1.32257422812738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82933807-1	3.48567408852082	0	1.32455204190389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36148395-1	8.09018276218689	-0.495224369200784	0.510335615580404	-0.970389590853005	0.331852335193091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18603036253841	3.41510933044421
Merged-chr6-134087889-2	5.00233686843018	0	1.3570209053367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80964286-2	3.73786981493154	0	1.3423324257346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127982212-2	8.6110433481396	0	1.31186567613033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108442502-6	21.4901221680284	-1.01987884672536	0.474498173730015	-2.14938413504973	0.0316039620141117	0.266476451841825	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27754430427523	2.92626202662956
Merged-chr6-15715194-4	10.2946699535857	0	1.30474995814295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105762954-8	43.2959362583544	-0.532758223841503	0.292218110681595	-1.82315265333436	0.0682802737467038	0.466768780024282	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05596430694677	4.49306277567065
Merged-chr4-46580888-2	4.99846325350996	0	2.33543390558311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8140421-4	10.8103994338305	0	1.29991493594309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10818727-4	7.507632242297	0	1.29083718182715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75170638-4	21.1463836677513	0	1.29630814493868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14801002-4	14.1325163770019	1.32383183158913	0.801319285455504	1.65206535723972	0.0985212281273256	0.613548858592225	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.838977036854949	1.47158896970822
Merged-chr10-80963841-4	16.1550306877723	0	1.29188828468422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21136596-4	12.7395535629891	0	1.29552777593176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63424645-4	8.33155274362646	0	1.28706912851777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35707932-4	11.6535633341614	0	1.28852378304838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37062877-4	24.267936494536	1.39050911170351	0.590668601763397	2.35412735254972	0.0185662489762357	0.177010520221929	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16919342595806	2.84034095258307
Merged-chr6-3344536-8	63.5193661904108	-0.978985734443513	0.321584911195703	-3.04425270079834	0.0023325911736221	0.0364916214583456	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.84563621244071	5.64943834177921
Merged-chr6-87500232-9	33.263858653571	0.289616233345029	0.452551086593826	0.63996362383053	0.522196248701017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47873292610197	3.24095438322535
Merged-chr2-128444340-4	15.3947127430714	4.06061534859235	1.02160945263503	3.97472374410676	7.04609948755988e-05	0.00240938993780266	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.98733255708278
Merged-chr9-107640719-2	11.8080665177688	4.12978518502053	0.901637527128192	4.58031643622279	4.64272948007423e-06	0.000273318739283721	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	3.4314922584484
Merged-chr13-5624436-2	2.76589340947447	0	1.51057705104341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82270363-1	2.9045807066907	0	1.35317079155867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16034244-2	4.50326336692935	0	1.40246090009561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56699893-2	3.85592645315093	0	1.33983644909307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81836145-2	5.16666601866395	0	1.42091915063397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3775058-6	20.9223694776458	-0.79752511838109	0.422883492349941	-1.88592161389248	0.0593055184397079	0.420004162562171	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46074197006488	3.5323215898973
Merged-chr12-17716031-7	51.4722075051412	-0.276786597111305	0.321033406168837	-0.862173816782598	0.388591875694248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28464792815844	4.96196004137713
Merged-chr2-14249985-4	13.6753604211733	0	1.28691027309305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16313480-4	15.7018195194135	0	1.29785918938315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126809193-4	9.89047739645984	0	1.29625589945387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71294249-5	23.6116083975626	2.97421931000124	0.394982973720583	7.52999371589431	5.07427648834079e-14	5.71056349282621e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47066616376008	5.77139242331169
Merged-chr5-136173775-3	8.5905576800025	0	1.31401670805001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142470197-4	11.7744993095708	0	1.30249158943321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104175867-6	67.7523751756253	-1.28040427495855	0.295002374023533	-4.34031854555995	1.42276314520137e-05	0.000670792788501651	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30612033068251	4.06598440137716
Merged-chr9-96675634-4	12.9160101770918	1.28767430329183	0.51280779290068	2.51102717454457	0.0120380429787227	0.127638805206493	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40885824102239	3.63577467008837
Merged-chr18-30513330-4	9.78600989698472	0	1.29142983564021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83631268-4	10.7236673578347	0	1.29603369833366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79485728-4	9.68266156076447	0	1.30219473439718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45028326-4	9.62310950177186	0	1.29856442796536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41596909-4	9.80422002318078	0	1.29500110161149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90965906-9	36.6664932403723	0.381911050939161	0.245768454917572	1.55394658385776	0.120197158648062	0.71138515795818	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15739121435367	5.52271792501765
Merged-chr11-108225457-4	8.10026813634511	0	1.29367106139163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39817226-2	6.8747102528127	0	1.31578133256378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98660643-4	11.6175975295013	0	1.29533500398635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31108983-3	14.8659070535491	0	1.2824933679891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33017020-6	25.5892823240787	-2.4616651657773	0.457074658072762	-5.38569601770708	7.21648390993382e-08	9.40829003921743e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31726011317861	2.96797672098361
Merged-chr11-4544531-4	13.7635004309181	0	1.2852842458844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91778623-1	4.70055200567267	0	1.31040079105566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153147886-4	9.07064074077921	0	1.29625989052983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150600974-4	14.8251118446846	0	1.28439227815066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105356593-4	9.7124023381833	0	1.30059379143304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166460099-4	8.81570819631987	0	1.28692595799092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52930363-6	19.8200008920302	0	1.28534011629126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127763278-7	33.013498699652	0.610951453363577	0.295477607353585	2.0676742946293	0.0386706606555121	0.308361087634969	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41019120239585	5.04702297140557
Merged-chr7-75669634-4	17.0672928871804	1.9570428992741	1.25001011396744	1.56562165170216	0.117437218060898	0.699294008693953	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr10-117715310-4	22.0277089668715	0	1.32112504447657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21200228-4	8.59119076341104	0	1.2932960182293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44710058-4	9.80469372802541	0	1.29425119204794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39607331-3	7.53892438899126	0	1.29840779819484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-18453191-5	22.091057177553	0	1.30064273149003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79135669-3	15.6944713401644	-1.26031180069786	0.462459385575639	-2.72523780467577	0.00642551886918119	0.0789548619829849	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50940563295069	2.74491462548817
Merged-chr11-80168833-9	36.5158737510532	-1.22216520546434	0.329703613236999	-3.70686021140393	0.000209844692532977	0.00567805850031465	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95360942042114	3.81659872172966
Merged-chr3-60528391-4	13.0041368401507	0	1.29058178996249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127079236-4	10.8407611498652	0	1.2924563220743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95797375-4	12.3894943037389	0	1.28481026423732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90461529-4	7.44916359525849	0	1.3031664049408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45005535-3	4.47140492021355	0	1.35340104478323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38105662-5	18.8023024164381	-0.235859924089049	0.464608806580504	-0.507652719338158	0.611696911688059	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39787378224188	2.66904529407455
Merged-chr13-91637009-8	49.8257489262295	0.0622257786400593	0.218680562848391	0.284551026527217	0.775988135816003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34648373863649	6.33561932029747
Merged-chr9-44986630-4	11.5702792581067	0	1.28215218492586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80454965-4	12.7663265670519	0	1.29830013794396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68867359-4	13.1086131343137	0	1.29532064299085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60541829-2	5.80746447768039	-3.01741827617079	1.05410966949119	-2.86252784079598	0.00420276335578169	0.0569661427601971	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99321521326043	0.469435083901436
Merged-chr15-83016174-2	6.93630497451687	0	1.31711344167578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29082158-4	12.4575496263161	0	1.31327391280834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-106681097-4	7.73514998340077	0	1.30125252121964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103019239-4	8.52203986788693	0	1.28763567428685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32507684-4	18.3268903794042	0	1.28922754840602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176818326-4	12.0585616010023	0	1.30058228660827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99814992-14	75.0513897980217	0.00556542033290887	0.257223654158885	0.0216365028757082	0.982737915256589	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82094161215938	5.76873558915732
Merged-chr2-30514981-2	5.15134322764821	0	1.35673712933598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100087527-2	6.91932987751071	0	1.33193991511503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47306541-2	4.69872429168028	0	1.34539829355896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43538900-4	17.7282201361007	0	1.30360713379117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60358919-4	12.906283184924	4.08567217235807	1.0094825086396	4.04729367511677	5.18132184018264e-05	0.0018716343668799	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.9450324219075
Merged-chr15-58472535-4	8.22397118310148	0	1.2951879824173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148477736-4	10.6003826690627	0	1.29658548510441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107783427-8	37.7564581091835	0.0101386419165402	0.277565352433531	0.0365270442713778	0.970862114883754	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68166912689998	4.67831852207232
Merged-chr10-94333527-8	41.9533844055157	-1.13941248126294	0.285268834893405	-3.99417090790413	6.49210235966142e-05	0.0022541600467292	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0735353484966	4.81940516818439
Merged-chr15-25559927-2	2.02753892214534	0	1.72982918180592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-39978348-1	1.95642836875938	0	1.4891776763272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90373590-1	2.22858200453687	0	1.50123594127656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88578809-4	8.19700231215799	0	1.28976453342409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-62458510-4	11.2925589753633	0	1.29858450225307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20403402-5	29.3351935569031	0	1.2937598096834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61267124-2	10.7004104208724	0	1.29661218676152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65765159-4	9.17433272201763	0	1.28904103475198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107428185-1	4.08234712629057	-1.71352155888371	0.967456908042889	-1.77116060119936	0.0765339988759635	0.508716375805992	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08896208769886	0.683637474991079
Merged-chr19-24995036-8	40.5665158017772	-0.869761513402571	0.255326269606894	-3.40647092342545	0.000658085597761728	0.0136172455577384	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66183273349221	4.80271096231938
Merged-chr10-116512725-1	1.91387943923874	0	1.50148711334684	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122601807-1	2.96546427817243	0	1.41535883139985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153338506-1	2.56318014450724	0	1.4016945673125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20804677-4	9.9300824623888	0	1.29027007429785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12479436-1	3.25361681494428	0.150320502777122	0.868209790290258	0.173138456232873	0.862542597687492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32124883086418	2.30731504751027
Merged-chr1-86217916-1	0.941190645724601	0	2.40937144958498	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59418867-1	3.68718329618601	-0.616298671646561	0.922598926502149	-0.66800280592471	0.504131801392874	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87373182291024	1.8171389792189
Merged-chr14-19768883-4	10.3594646671284	0	1.29618603439418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129607138-6	17.0560243923294	-2.2628378201976	0.591845995826384	-3.82335579889839	0.000131647596902767	0.00394435757322705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66968303973027	1.66398411766936
Merged-chr6-124202354-4	7.19906082724757	0	1.29462996370192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110703423-4	9.22087693934176	0	1.29347640108331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13299408-4	9.36691876957145	0	1.34148284835438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143424084-4	9.10276709171092	0	1.29571086633825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126109805-4	9.67225235000308	0	1.29146104975324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125618203-8	65.7276674397166	-1.83371431727672	0.329536213625089	-5.56453051731343	2.62859127068874e-08	4.07999822267045e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.27511234754319	5.37805506163574
Merged-chr8-72169418-8	47.7670122223958	0.205777246124703	0.302167100504418	0.681004800923701	0.495868452627694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65167053233893	4.86572751438526
Merged-chr15-76770619-8	40.9420951143472	-0.0436226450184193	0.286500024174474	-0.152260528228974	0.878981455785029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31812441334188	5.00220760323039
Merged-chr4-32238698-6	31.2748448733297	-1.55875937624657	0.422661579062621	-3.68796089699846	0.000226058379096199	0.00599027203585573	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56874513219141	2.82596652232299
Merged-chr14-105923017-3	5.70343371362432	0	1.36334548243441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112671873-4	16.1552969972278	0	1.29399150128721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91008384-4	11.1584430441435	0	1.29124510913557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35330891-4	14.0880908685677	0	1.30555926592371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6557101-4	16.3757430498138	0	1.28732278817002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72881438-4	10.9889242885671	0	1.31316257509638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57085202-2	5.42317468681175	3.25739727013069	1.0425765287184	3.12437234140968	0.00178184821357025	0.0296427325264668	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.88086620139027
Merged-chr6-54729905-4	8.74577622283551	0	1.29609397382779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39026602-1	3.41206687445087	0	1.3149105279814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64306330-3	10.1139890011229	0	1.29644965010459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102717194-4	9.75316286741163	0	1.28899735451087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4258413-4	11.2720655879148	0	1.28111568766461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89081320-9	36.9825548863034	0.324340343042522	0.246370475930162	1.31647406945977	0.188014976139741	0.974846607293351	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4615887398543	5.74746418903904
Merged-chr4-10990205-1	5.42716806275121	-2.14020314655783	1.19010378608779	-1.79833319713509	0.0721242220142485	0.486793968918645	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6712839397506	0.469435083901436
Merged-chr6-108719079-5	40.4081149406305	1.69083667599452	0.451516061587398	3.74479851292561	0.000180538604774481	0.00504165626820224	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38026880589327	3.78936521220572
Merged-chr2-130525446-14	74.755941768182	0.38710919869387	0.201227543721893	1.92373862709806	0.0543873536894163	0.393803808478246	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98447871215213	6.31447749719475
Merged-chr9-24542095-3	25.0124851798827	0	1.32113608998114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83747858-15	192.188817435313	1.45330537592714	0.163011565752046	8.91535130788043	4.86272119971105e-19	2.44430291935629e-15	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.54274168897952	7.98336117768281
Merged-chr3-121163616-6	24.9423471613699	0.0675661118023533	0.386959121442285	0.174607879898318	0.861387756446995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2259848147933	4.59605922976184
Merged-chr19-32884681-1	2.93921860859444	0	1.43027898342264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25447350-4	17.0997092295252	0	1.28927043236132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55259959-4	11.1692183243885	0	1.29195554691318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20058273-4	9.67546207099922	0	1.29457630694496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80478238-4	11.6866852221709	0	1.29297318265098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125067619-26	276.252764349862	-0.0486569577603695	0.118729352674499	-0.40981405747039	0.681942353363596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.45157092299788	8.4063757071257
Merged-chr1-191422907-4	8.28668596461617	0	1.2862190638059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64771385-4	14.5211921670882	0	1.29187632477306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70792327-3	17.885387844191	-3.17612743443084	0.456273753148222	-6.96101279662928	3.37835081073581e-12	1.88685223998583e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78290037504391	2.68904493538903
Merged-chr2-51014459-4	7.15129323725203	0	1.31010675812497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76355484-4	9.307102022844	0	1.28500931485311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75822688-1	5.22710991806409	0.474049036132141	1.01132414155361	0.468740947293019	0.639254814556198	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7950646529465	2.91520759840552
Merged-chr17-34298782-1	7.03379037776966	-0.0725257785991056	1.00742985657372	-0.0719908965630288	0.942609152544328	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26678057651906	1.88787614081909
Merged-chr7-96554433-1	3.14935161813537	0	1.37045225639288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55430770-4	9.99529597048494	0	1.28889575245253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45374295-3	11.1371960912067	-3.0748903046371	0.820873478412097	-3.74587605215993	0.000179765337995773	0.00502650653687283	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06793860710818	0.989878296978726
Merged-chr2-157448008-3	8.31391434801119	0	1.32154379010792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151661795-2	5.02633484161295	0	1.32783198601617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64723391-4	11.5540202081459	0	1.30131982790616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57275473-12	53.063407829315	-1.00497065532726	0.254198803130844	-3.95348303355296	7.7021727786427e-05	0.00257973440488563	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63872434022908	4.64364189449112
Merged-chr12-82326638-4	10.2766839247918	0	1.29197340027749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180225999-4	9.02393161734609	0	1.29028983773534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130899532-4	9.51496883294759	0	1.30370805386257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109267160-8	31.7203435006617	1.11630388578586	0.314248784991503	3.55229340287203	0.000381888776016979	0.00893240894660395	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31653472228939	5.35343052725198
Merged-chr3-115749200-2	12.0633564028263	-3.50725037535441	0.808966967074318	-4.33546797100827	1.45450352818405e-05	0.000683784083113056	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60078616277247	0.735627456805112
Merged-chr3-27766249-4	8.95518308733702	0	1.29369812453321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10278898-4	17.3005699322079	0	1.29391624029651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94050246-4	6.93288388350424	0	1.3208558389852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13574332-4	10.0537167643863	0	1.28356796721986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20712429-4	7.98393379649399	0	1.3290512399278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28907411-4	11.2326508624985	0	1.29485727672464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64197968-9	76.2694312067924	0.554159302372884	0.1815659194408	3.05211079303662	0.00227238209568526	0.0357637476937979	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83830547796888	6.41706821149074
Merged-chr17-46856832-3	8.39562600338244	0	1.28723709525365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3259259-4	17.0656928345896	0	1.28791988359256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19088599-4	8.61119163618446	0	1.29013494219172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55409334-10	123.201308355565	0.295222215227408	0.155944936126184	1.89311831830517	0.0583421366203526	0.415704422592254	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.78413762554326	7.09344790818341
Merged-chr17-78891193-8	44.6523644381257	1.03435586600088	0.35288761385274	2.93111978260739	0.0033774252553945	0.0484844531500459	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90778699884905	4.78794504932108
Merged-chr11-11554256-4	17.3853033411925	-5.17303508322132	0.99695966769845	-5.18881079227972	2.11641301475538e-07	2.28972061030141e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72032821842887	0.306240821987646
Merged-chr3-95982352-6	39.8433697362081	0.0224460201321079	0.242873361742806	0.0924186167270058	0.92636544871809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28140422182536	6.23205548287048
Merged-chr18-38542694-4	13.3337857337187	0	1.36756522340804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78396422-4	8.80826897957757	0	1.29479680091461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88450282-4	9.88958393566318	0	1.29607468964705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80208951-2	4.92794558731392	0	1.32630304459802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112759104-4	8.99061932361201	0	1.28588718947232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135736555-4	10.3352204192574	0	1.28184429767283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23375083-4	26.8948750356158	0	1.29947973874347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126884336-4	9.16357867722613	0	1.29107381389553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135705524-4	8.8322536548023	0	1.33301850943502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166771524-6	27.1288600775044	0	1.27934185625888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64377945-4	8.24507963103741	0	1.31199640691234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128548408-5	25.2129475361633	0.265895836149716	0.489174026637061	0.543560822265397	0.586743725803135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09287484612561	2.90517905380964
Merged-chr10-122534916-4	8.62508258514712	0	1.28638538933762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79532557-4	14.0391746614409	0	1.29141361798707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63391491-4	13.761950689535	0	1.2947403369739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31414121-4	12.5398126040314	0	1.29164528551026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122208532-4	26.3982181338604	0	1.28514591912003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177711565-4	13.7099688832184	0	1.28906816368947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32650576-7	24.6198821629708	-1.12276816334712	0.352083079079459	-3.18892963070721	0.0014280063486969	0.0249838026404144	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25199508018875	4.12905979346195
Merged-chr19-40707702-2	9.75025426677267	0.702204932429427	0.642866349890294	1.09230313975721	0.274699880757395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0851420896845	2.74889511907211
Merged-chr8-94377218-4	21.8850934478377	0	1.28414401100436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5804651-4	9.9300389316258	0	1.2981722630914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31917967-3	19.9538839913113	-2.47378308613131	0.553380486632443	-4.47031137867787	7.8105800572215e-06	0.000415288986508703	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83371999464699	3.43000953671338
Merged-chr7-142342433-7	41.3017949505801	-1.54567604892873	0.328828647399949	-4.70055167379853	2.59459588052009e-06	0.000172128388231945	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20998589613828	3.66813819010782
Merged-chr7-114890305-2	9.21924009401598	0.75896495609144	0.734189111963938	1.03374586155497	0.301254986971997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84732903077008	2.49632546760905
Merged-chr12-55484667-2	8.67029743878023	0	1.37326741590679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30405969-4	11.2092264210102	0	1.29291949461577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-188984202-4	12.5216256227238	-0.562278137087313	0.715326610874203	-0.786043925305884	0.431841753886605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82434303586091	2.00797577754665
Merged-chr12-102296114-3	5.44488765857572	0	1.33653822678278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32191130-6	17.9223875773261	-1.67740920827902	0.527968847831904	-3.17709882915871	0.00148756334755474	0.0258252695295729	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79545446935905	2.10370544471103
Merged-chr3-14869994-7	31.5070260038034	-0.257980064922071	0.332454528071952	-0.775986016548516	0.437757242365322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60102470329645	3.96968723476629
Merged-chr4-133941693-10	55.7682427903216	-1.33355022945298	0.253284869894748	-5.26502127824349	1.40173121399252e-07	1.64563550027589e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.74641529924224	5.43250366733102
Merged-chr5-105767108-1	5.26047149741528	-3.46218005257022	0.920598237878052	-3.76079369926932	0.00016937507817886	0.00479964607921759	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17329551333265	1.00443616959195
Merged-chr15-75021534-1	3.95416946481792	0	1.40614918588703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12301370-4	11.2747981279183	0	1.30483133859388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3843634-4	9.70945178676333	0	1.28642335980221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32533316-2	6.7460305883926	0	1.30978446036161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8660952-8	45.6203131918375	-0.262674491751756	0.348208192578559	-0.754360458341297	0.450632808201617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04930894442375	5.03223576732336
Merged-chrX-36108783-3	8.39755887463334	0	1.305116069167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3667045-4	14.3716957945831	0	1.29591519534636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168556247-4	10.1073517574509	0	1.29197146070108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35745416-3	11.0076940063866	-1.74431556253582	0.671158157729835	-2.59896351172411	0.00935057119317344	0.105323371657301	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19379424919396	1.97442138359878
Merged-chr1-62725083-3	16.5943428940619	0	1.30799187077145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88631660-4	8.57067922413924	0	1.3041925930841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-127610940-4	12.703843058793	0	1.28179459334056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59614400-8	28.4346985233463	0.113186649879636	0.327734180721882	0.345361138805619	0.729822888628843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75878468195828	4.79417070862801
Merged-chr17-34296877-7	40.1962737517354	0.0836750979113396	0.276920068119085	0.302163358833772	0.762527534875847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5865166271373	5.73598597808583
Merged-chr1-7100728-4	9.39992875843356	0	1.2920478256986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105001571-4	9.72552749650952	0	1.30236272792847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106664665-2	7.18591798656917	0	1.32855711203307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122573766-1	8.13571928973682	2.14585676038778	1.00579230758935	2.13349887864116	0.0328838235457329	0.274961782907161	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.775974565785538	1.64254215594465
Merged-chr12-79748991-1	2.7807571027368	0	1.36551638269773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45758995-4	10.2431007474019	1.74360762581907	1.11048664787274	1.57012930246316	0.116385032751582	0.694293988514232	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.989878296978726
Merged-chr13-24488895-2	2.86456375209786	0	2.3047846160465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106756144-1	2.71617562495407	0	1.39569769979517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-42790534-1	1.46893863092824	0	1.48448799706023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45491568-1	1.15012619147388	0	1.5595415324409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69680824-2	5.15739598962074	0	1.34779238876656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-81321920-1	3.55035493399455	1.51602208718379	1.15356637068758	1.31420447553456	0.188777402791982	0.977638941420576	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.981953565221666	1.72678076939999
Merged-chr11-20929242-1	2.15598888720101	0	1.46282426293198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122343966-4	11.4757833208582	0	1.30047676175793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157447462-13	62.4562112567386	-0.938176703322241	0.262635377427629	-3.57216423968154	0.000354043249837652	0.00846826874227349	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67574084938033	5.66326696605173
Merged-chr9-31841327-1	1.84769038681249	0	1.44331289608091	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87623825-4	9.40790738902614	0	1.28951843695418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115413831-1	4.73723761334972	3.62104248723067	1.10107838044316	3.28863280902244	0.00100675273711261	0.0191186470094044	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.81518459389541
Merged-chr3-10065027-1	4.6106048780366	2.4923477982899	1.07239875709697	2.32408680240995	0.0201208422412864	0.188076103998206	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	1.88772579123251
Merged-chr4-119943436-1	1.77464701141689	0	1.50270015635645	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102700313-4	9.4913108834211	3.06724207983856	1.04276359906269	2.94145488257897	0.00326674426935396	0.0472976125646019	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.69757189012738
Merged-chr10-97313158-4	9.98935706289555	0	1.29907543199476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70816842-8	55.8666123489097	0.0930040112829997	0.258694900584212	0.359512348612084	0.71921184161303	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37293577598468	6.46380466861637
Merged-chr13-98874396-4	10.7737144317608	0	1.29366811620409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34138236-4	9.54225990555604	0	1.28546525092885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101029601-4	11.9974834269348	0	1.28782791242389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112255310-4	7.56771768806771	0	1.32633550903847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67514275-4	8.50638593849251	0	1.28539565988876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89309239-4	12.701718094807	0	1.30396687170566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60923267-4	12.6460154730019	0	1.29364809620878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55390387-2	3.99302117761764	0	1.32470312666163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27376229-6	45.62144508173	1.60654603758396	0.390155718126937	4.11770470851146	3.82664575066741e-05	0.00147265013676745	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98368900453002	4.22507310865502
Merged-chr7-74527752-3	14.4037868336153	-4.17229124087929	1.02468167578089	-4.07179257665527	4.6652715201976e-05	0.00171944068109888	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23891106205363	0.469435083901436
Merged-chr18-5101055-2	5.97133801444301	0	1.3294474664797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77825298-7	30.6198532880367	-0.831963876789753	0.417219245244264	-1.99406879302194	0.0461445370873983	0.349515699958526	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73985108593974	3.51339090749546
Merged-chr17-67194126-14	53.2050882634586	-0.0166888179575302	0.228038899862931	-0.0731840838013231	0.941659631708793	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01386369498126	5.98573431224482
Merged-chr12-3799757-4	20.747821335078	0	1.28852369786713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51738833-4	14.0861308322872	4.23787957733692	0.988696845219254	4.28632861309184	1.81650224352479e-05	0.000816182168437209	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.41491760955135
Merged-chr8-125198605-4	17.258900583332	0.0740812210431755	0.431032080288861	0.171869390773719	0.863540211091048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12276837593661	5.13404849322033
Merged-chr6-142715084-4	10.522280400681	0	1.30548778708607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134098783-10	105.098321780653	0.214654114141063	0.176753191024273	1.21442850845949	0.224584134530996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67789571418888	6.91477708793397
Merged-chr15-66801719-4	11.156703151028	0	1.29616013395575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171184516-8	36.9701386457583	1.19256992596239	0.347698691311473	3.42989477890806	0.000603815351507613	0.0127198317084515	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06408203260073	5.27357461907227
Merged-chr10-80152933-6	17.8447674648539	0	1.30258213327083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86801395-3	7.14304144859696	0	1.32369224106961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27116822-3	12.2347292661519	0.0443033272930164	0.601905964841383	0.0736050643802664	0.941324641280184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22284846797566	3.04537585383933
Merged-chr10-19107964-9	35.5836934903345	0.0387155108575753	0.293178329037244	0.132054476825458	0.89494120271875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06177217651843	5.12762538314882
Merged-chr1-86179020-3	7.86601464793884	0	1.29644681664296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107264018-6	24.5136147616871	-1.36234483216041	0.543103759718045	-2.5084430144024	0.0121264526031209	0.128451154450241	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65041304591486	2.37076189257221
Merged-chr3-65974799-8	104.352070533577	0.562641332920011	0.300446630925789	1.87268311575438	0.0611121562533555	0.429586377208667	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72850724755167	5.17390310342423
Merged-chr1-170282614-4	15.1084219955506	0	1.2999358795686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81706763-4	9.1748772233378	0	1.2936944666813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104234500-4	17.999682055675	0	1.31150763329586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74572897-4	12.3177095660121	2.79734937238669	0.827266018556551	3.38143875082362	0.000721073061704986	0.0146560622986544	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	2.52654123867406
Merged-chr1-121508927-4	10.2632018372332	1.89227511133551	1.17574576084494	1.60942541691636	0.10752335129073	0.655553360089944	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.851599296279844
Merged-chr18-67478719-7	31.0045545173545	-0.505055115774257	0.374295642075525	-1.34934810614853	0.177225180709412	0.933496425813094	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58435485427528	4.09993541231821
Merged-chr11-106675416-8	65.2163302197862	0.435925660491042	0.284970139556797	1.52972399553518	0.126085061519022	0.734916994917674	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79615803396124	5.11743856754922
Merged-chr5-146767802-5	26.6720068927053	-3.17539616617654	0.715492789382841	-4.43805474114634	9.07755356909158e-06	0.000467809002780646	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46233813501105	1.15307255889252
Merged-chr3-117995580-4	11.8021824275276	0	1.32272845136673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82969592-4	14.8275025551493	0	1.30485764459118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59003432-3	5.18938176410624	0.899331197008523	1.19966409667702	0.749652506480439	0.453464018636388	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	0.683637474991079
Merged-chr5-137883548-3	6.3442895446394	0	1.32207071421485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31408064-4	12.5679347103958	0	1.29575321199647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107056515-4	8.07324199078436	0	1.30360956305254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19506613-3	8.24403623259816	0	1.30392908831682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85342525-2	7.90654342122633	0	1.33528565764546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167700826-4	15.887991247711	0	1.30517328923231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105620619-4	16.4481701411522	0	1.30682300471152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108223350-4	15.5620559740761	0	1.28584663483929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146099973-7	31.8359545770336	-0.717781693369039	0.385913566635075	-1.85995454792545	0.0628919568286092	0.439262271368351	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49586230358129	4.44008557558567
Merged-chr7-101550917-9	79.7008479061025	1.04143606804905	0.209962055645601	4.96011560206341	7.04512412620711e-07	6.06548987023887e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56279299158706	6.59239571101857
Merged-chr5-136007974-5	21.1231775632663	-1.96092998865571	0.497155729777025	-3.94429727187333	8.00343267710409e-05	0.0026574812587299	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42773172206767	2.94059065734247
Merged-chr9-94605154-2	9.97097818501015	0	1.3010575948135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98946248-4	8.08504650559464	0	1.30463270596363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99427278-4	8.1144067615325	0	1.2931867915559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41685760-4	9.03121634333159	0	1.29629658566801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91293901-6	40.1879566284871	-0.319901799726766	0.215535361010753	-1.48421956483886	0.137750681004245	0.780563302194188	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.49297982222431	6.18466018599818
Merged-chr12-79140960-9	107.836762731061	1.06653325065663	0.192734652677443	5.53368704506686	3.13568252855232e-08	4.68888582404531e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30450369684206	7.37534626772896
Merged-chr10-40099455-4	16.1416327852569	0	1.32052285629275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82811437-16	74.423799175649	-0.92561942630808	0.213729225615604	-4.33080419227655	1.48565751041679e-05	0.00069493039137935	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5720137822065	5.60994694402502
Merged-chr19-12457730-10	59.3514814154689	0.0693354653006026	0.221513851669194	0.313007357229052	0.754275072557439	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07397213756296	6.05843363084008
Merged-chr4-139248906-4	14.7304389683588	-4.78911081186641	0.951527819790611	-5.03307492672183	4.82674362515088e-07	4.55792469550736e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96451214059512	0.563523181795778
Merged-chr4-117167468-4	10.2665047509776	0	1.29559390780149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7863737-4	12.4408516487967	0	1.29829078572726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129363411-4	13.6184638880898	0	1.29422362689272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98961371-2	3.71667001936343	1.37738590955247	1.26273224561286	1.0907980803832	0.27536174133495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499615150807969	0.683637474991079
Merged-chr1-128044362-4	8.49397970492574	0	1.29892393324819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70091355-3	6.72537302335286	0	1.30814285097763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139273518-4	12.9973941193304	0	1.29468276762409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152122871-3	8.06151678412409	0	1.30942877133435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-43306025-4	11.9013403686017	0	1.28910154184592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106376458-3	6.30745639861763	0	1.32213807848008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52772555-6	21.5218985583037	0	1.28216864320357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71143478-6	30.2708466908957	-1.30695407944303	0.423200375293903	-3.08826304451026	0.0020133017869906	0.0325755276595598	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59390000798405	3.05797500272467
Merged-chr19-41371504-8	68.2395923539879	-2.03080895588489	0.251190623324984	-8.08473233993882	6.23008696655077e-16	1.23367049368553e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.76336620982749	4.58665756674822
Merged-chr13-102706087-4	13.8702887667275	-6.12037282337659	1.05891243221473	-5.7798668116265	7.47597858821143e-09	1.39180996246514e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97481119180909	0
Merged-chr9-89874682-3	13.6200499108456	0	1.29088485860633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63097427-3	8.94754563356467	0	1.30033214433528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59530896-6	21.4432973652942	-2.08485273587568	0.571961460099908	-3.64509303740764	0.000267295085158389	0.00681492962729617	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24092739409504	2.08364730863447
Merged-chr9-27023786-2	5.6256279927449	0	1.31628005858205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74689773-3	6.12087512156214	0	1.3106684261822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123128598-4	10.2223119435168	0	1.29391271999929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167246468-4	9.628904352421	0	1.29304373690407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31467006-4	13.8193025726841	0	1.28854656577553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76786612-4	7.65664939164249	0	1.29208218847918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140105953-2	5.94432378805083	0	1.3619451394758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80279651-4	8.46758851424825	0	1.29350809954507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31506971-2	5.0007939078926	0	1.31264350005484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59036894-3	8.02926159022539	0	1.33586956112587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123945493-3	10.0576939617901	-1.07789484377732	0.494212665281816	-2.18103444022963	0.0291808692282268	0.250901721129961	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0827374203151	2.99820822161176
Merged-chr7-116597116-4	10.5265053897694	0	1.29724005623072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143847100-4	10.0601589763936	0	1.29554318289279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83081700-7	25.2082994767436	0	1.28997421388968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78021435-4	16.3101933103476	0	1.30876583702509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52823946-4	6.58408075642896	0	1.30229002814096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20770440-14	89.5781108489781	0.303680175040036	0.207298576675727	1.46494095574557	0.142937027535934	0.800588745741459	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56848074599113	6.85830314561796
Merged-chr16-26626312-3	9.17467041469694	0	1.33106241776761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41923660-6	17.221807044239	0	1.27949206639516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83422018-3	12.0288709257241	0	1.30885602483352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87636030-9	56.2708741199235	-1.21773657072071	0.23430966768185	-5.19712473995811	2.02394558043267e-07	2.21535591120525e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32627100366627	5.12107931637718
Merged-chr10-25449573-4	9.02623282452189	0	1.284640820875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43181696-4	8.73583541452284	0	1.30122035805021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36230823-4	8.53174760821395	0	1.29031749018441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160157279-4	15.0968586554048	0	1.28442364939652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8997750-3	10.4641610210072	0	1.29817367583227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58211148-8	51.3444241895018	-0.580541348637978	0.235151158944232	-2.46880071203756	0.0135566694116059	0.139244595940082	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.44369487915768	5.84999897467616
Merged-chr4-129701715-7	47.0023601925338	-1.44415042671816	0.282075151262425	-5.11973642575348	3.0596297486762e-07	3.12709568865365e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19402416064528	4.64172186915699
Merged-chr6-49107318-4	9.75614823987516	0	1.28602513186836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72225994-4	13.0075452112656	0	1.29494382055433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8993443-4	12.1811075100413	0	1.29634091375408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105835513-4	9.95708112583831	0	1.30056900044989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11766627-4	12.4807844305467	2.46317064062939	1.16871575376968	2.10758743747952	0.03506669116621	0.287430594301993	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chrX-160116854-2	6.08619616201119	0	1.30100991769498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4349850-4	10.3210011824198	0	1.29429405935049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120469959-4	15.1661874595626	0	1.2852745043522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16997040-8	62.4292318083373	0.197835841984368	0.248183661969299	0.797134833189949	0.425372728094599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70112704864941	4.9897507677776
Merged-chr2-34778623-2	8.5089036771604	0	1.34105729845684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105894922-4	8.0938339551607	0	1.28866790096027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3132266-4	23.6026988489812	0	1.31175057148999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77448200-4	20.6958904216875	1.94009667736635	0.744835677817827	2.60473113083187	0.00919463817503969	0.10395031594916	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.936187638705818	1.96073424694151
Merged-chr13-45358421-1	3.63134618101666	3.71050617658109	1.28888806453446	2.87884284033719	0.00399137183343456	0.054944213993599	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.56112970471021
Merged-chr9-61368599-4	18.1374874628631	0	1.30336474619302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132963684-4	9.23948870034299	0	1.3174007359473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29671250-4	19.2702500203053	0	1.32785266039019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131915909-4	14.7422474345423	0	1.28272659298474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40963160-6	28.1850335429516	-0.990064185678519	0.411547583171485	-2.40571011995465	0.0161410667802373	0.1585307564027	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15113834858954	2.57374258684139
Merged-chr11-45750499-4	9.91718401445208	0	1.29082818960422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129789699-8	33.8214892544947	0.264610661394865	0.288192805101682	0.918172337097393	0.358528648671182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5002195793875	4.83001239772454
Merged-chr6-125353024-4	11.7156315391914	0	1.29168975640155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44757916-7	39.0670406507599	-0.247209334116718	0.31722036213819	-0.779298442415327	0.435803931994419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83419335858726	4.47727855203268
Merged-chr9-25539515-4	14.1159498329934	0	1.301090717318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186182775-2	3.31978884219154	0	1.34224954876613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48750589-4	10.9116081434125	0	1.29116325958308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43779178-4	11.1022083869031	0	1.29203403227821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84228699-4	8.32202345348875	0	1.30620154519643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154786396-4	11.5245287727313	0	1.28680154868778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81351975-2	9.46229970870339	0	1.28685127866333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160452175-4	10.654581552258	0	1.29474408340136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20293990-1	1.63865521974381	0	1.58070280084552	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134556245-3	18.8024122008974	0	1.28566511369067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102656766-4	13.4660133245428	-1.34827441864566	0.880084823410027	-1.5319823530436	0.125526789532816	0.732767352560776	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13969662995624	0.892489746801999
Merged-chr11-47060234-2	22.4495929473016	-3.77614820738523	0.512853999254609	-7.36300821066727	1.7981130720871e-13	1.63193745567505e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34950158182058	1.7852714664239
Merged-chr2-59285615-1	2.12459930400824	0	1.45768872583741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66131653-8	41.1082181961111	-0.46639681846571	0.27564534712943	-1.69201774426003	0.0906425904190972	0.575615946313965	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37574030270494	4.74687117500547
Merged-chr7-135667459-1	3.37980644818328	0	1.40922830128024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87487209-2	7.98903411928101	-4.84516668686489	1.03814772632296	-4.66712642527869	3.05441404563101e-06	0.000196064577824955	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57094173048597	0
Merged-chr10-99633374-1	1.79459521725932	0	1.40228668870206	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20748650-1	2.35814832583489	0	1.37313026386251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53390671-1	2.00113594678782	0	1.466055148197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64046503-2	7.37901693509585	0	1.30179313938197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66908175-4	8.44533090974164	0	1.30820606540886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9128600-3	8.07823637689992	0	1.29872025258919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20187866-8	34.2475823318577	-0.521227847961847	0.278996559602524	-1.86822320929126	0.0617309650126842	0.432818845463397	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3594730248384	4.86128171082721
Merged-chr1-143929917-3	5.23503617000525	0	1.34059231424995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63256877-8	50.377772516691	-0.166096272627191	0.273247799117249	-0.607859507610965	0.543280657581986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92427440170318	4.7893356068629
Merged-chr8-105596907-5	11.1367000880969	0	1.28277710412197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137757805-4	10.8798968780897	0	1.29215260690607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3201498-3	9.88094288950562	0	1.31118363393682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105280755-1	8.37810674066069	-0.873798943140577	0.750643498702779	-1.16406649048533	0.244397067228618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55856285885103	2.16564811853927
Merged-chr11-120903445-2	6.21590633477936	0	1.30774060142605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41385629-4	9.68063119099799	0	1.30175581182356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59480782-3	7.49746441627085	0	1.31452268096076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31921211-3	9.21295405389647	0	1.29145963441712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37474241-4	11.989138045236	0	1.2876798706637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12556501-4	12.2848101618894	0.629127756360265	0.599442073936585	1.04952218690412	0.293937849254792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14012266795569	2.21043983090998
Merged-chr18-32389860-2	6.06007680742206	0	1.33080991322063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103815748-2	4.81911030150663	0	1.31253809901131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36914691-4	10.5062640485803	0	1.28526607229681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-97313720-6	11.4744726052827	0	1.28856431356979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148405840-4	16.7120240482891	0.856231008508764	0.573345102054717	1.49339552294117	0.135333684204335	0.770945421324773	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02168844102182	2.63581209903162
Merged-chr6-142752693-4	9.19449162976238	0	1.29483962914496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81304299-3	11.8615266999579	0.467478787302919	0.950201983413619	0.491978332463054	0.622734661059117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.666166562322424	1.1517642783294
Merged-chr10-118098129-9	104.188096719196	0.482664209265542	0.227418626727773	2.12236005559609	0.0338075138385422	0.280354563011914	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66661832198913	6.16678578480196
Merged-chr7-59163426-3	7.84171442591734	0	1.30636439836316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103777584-1	3.85345549623184	0	1.31365816393451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96163468-4	12.1056390730944	0	1.28817840112606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27975490-2	3.99763015945881	0	1.31730523079159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110421140-8	26.5664987577768	-0.011673814274646	0.299929835292626	-0.0389218173752419	0.968952721996702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9193248608591	4.86724255487954
Merged-chr9-85369779-8	37.9905843030052	1.20739348651793	0.253557158657597	4.7618197526357	1.91855009213018e-06	0.000135681357489544	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05443950538047	6.24051434253443
Merged-chr9-99074668-4	10.279230109502	0	1.29350179438899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41375396-2	4.6244189161579	0	1.33805455325104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85691506-4	9.14711158919905	0	1.29622194617847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32187356-6	31.9387164149136	1.13032934306485	0.340277147042294	3.32179034910139	0.000894418707240764	0.0174467715950313	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90530659707996	6.07016321704803
Merged-chr10-25426722-2	7.99624655471442	-0.428434732838766	1.01542705444133	-0.421925662670552	0.673079277897406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4845591977132	0.773587911294612
Merged-chr6-134021045-8	55.0594068329205	-0.943987634547362	0.29672586544653	-3.18134596431894	0.00146592454920901	0.0255173962686766	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71234579392799	4.77183778602393
Merged-chr13-34255409-4	11.7373846234873	0	1.28386431189438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115766380-4	11.9224621598858	0	1.29345004431951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135914400-4	14.9296533247136	0	1.28336728865659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116384374-4	13.5471347154264	0	1.28770729397469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3251299-4	20.7342079873733	0	1.29820247785478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55797453-4	8.14824707457653	0	1.28994304081122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11771890-4	9.15668287594116	0	1.28796342166866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53783925-3	9.16150394244214	0	1.30047318656288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137950648-3	11.5895967497657	0	1.29782113247772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14387960-4	8.30137786899351	0	1.3006028646988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118596141-4	9.59624653990027	0	1.29579192863573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14884855-4	13.5447360719753	0	1.31925569275327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8579566-8	48.2722890166345	-0.97005697763043	0.264887029678125	-3.66215355583543	0.000250103861252191	0.00647771974529754	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11065637861978	5.00926152899499
Merged-chr14-16427773-4	10.6720309970155	0	1.31203486932112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55552779-3	11.243460387796	0	1.29341483194264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116811825-2	5.1860191864726	0	1.32527396976982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83601966-5	31.662287024604	-1.50507626457993	0.355905982723869	-4.22885913032726	2.34879350306767e-05	0.00100120195858747	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17355952880207	3.69358325332628
Merged-chr1-170997890-4	11.4175278553387	0	1.29459655010114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-73548412-4	21.3750101757928	0	1.29467299096048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54952873-2	3.00239097655847	0	1.40713329436076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35590595-2	5.27773716489013	0	1.3282275566209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113401944-2	2.90598830562274	0	1.42478188058462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35063537-2	4.23888537671402	0	1.35563362071616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80063420-4	12.5369083896985	-2.94845988467195	0.690948918927278	-4.26726173803055	1.97886938322413e-05	0.000873134360001106	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47828996769172	1.27663763006505
Merged-chr1-134063416-3	9.40580652999465	0	1.28968525645874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24271803-10	58.004268518236	-1.69101314878981	0.320749843994858	-5.27206226425138	1.34899293282352e-07	1.59694369906315e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13359300584378	3.60490454108354
Merged-chr12-109507837-3	11.1384170289826	0	1.28504410065576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119779449-4	7.71464892515348	0	1.29241779351595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79156989-8	50.7127903779517	1.22038057945495	0.197149998531611	6.19011203928198	6.01214661784266e-10	1.66014986371401e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46319581002017	6.68654655249753
Merged-chr1-84864845-4	7.225757778757	0	1.29363753767295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7037412-2	4.89361274648583	0	1.32708158460579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15537765-7	79.2403680241603	0.242986590921311	0.253254747045538	0.959455227418181	0.337329464502411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17185323485082	5.43960178697053
Merged-chr3-87338083-8	46.7809700350824	-0.122873132347131	0.314196182435734	-0.391071372651905	0.695744480308994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88191686482459	4.55510195554191
Merged-chr8-71495157-8	32.8557019267977	-1.05654360901632	0.342283087898383	-3.08675376134852	0.00202355145666228	0.0326899860289378	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72239281461932	4.63576279747867
Merged-chr15-66708744-4	7.32658801281047	0	1.29034747307716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8770623-2	5.66418211864956	0	1.3355039267911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145599386-4	24.4922856322866	0	1.30364591167763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4233201-1	4.80189886498957	-4.8358223526262	1.12792310483247	-4.28736882142728	1.80801961856489e-05	0.000813123537472411	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23299026421424	0.382164212378408
Merged-chr1-62283812-4	7.14138387422748	0	1.3025890227812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32281774-3	15.9052965301218	0	1.28648563136497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49250244-4	9.89170171239996	0	1.29110683426846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125576296-3	17.5785017570734	-1.65720546334832	0.667957509202752	-2.4810043161672	0.0131012786666644	0.135762156002514	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32841565116526	1.17564474993106
Merged-chr15-101979740-1	2.98799282626066	0	1.36109415094236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-30606936-10	67.5425667527658	-0.50387804989698	0.239754282681841	-2.1016435838422	0.0355845089617203	0.290627810821741	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97363508318638	5.36147880341017
Merged-chr11-117326452-4	10.5536224073527	0	1.29695271211228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32435281-5	21.4736151984681	-6.20187012997292	1.00079107759118	-6.19696784757542	5.75612536853154e-10	1.6143337696655e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13366350207244	0
Merged-chr14-57264163-3	6.64088785814316	0	1.32622320252105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177257396-5	12.2538923586174	0	1.28883727689323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75255552-4	9.52234856855295	0	1.30109271173052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59235424-4	12.3816176610268	0	1.28677033557509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58529454-4	9.26251415490281	0	1.28999796275394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14017936-4	10.5380418329643	0	1.37777019109656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4099018-6	33.6998548921546	-2.39885353227966	0.387429278310148	-6.19171979655939	5.95112770524604e-10	1.65481868522131e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58329263653235	2.59006331420087
Merged-chr3-65518153-6	33.0002740857708	-1.34567362021087	0.481656287033219	-2.79384626846584	0.00520852329492868	0.067274919584593	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2182786725269	2.44181999537264
Merged-chr2-18903863-4	10.6620980832775	0	1.28878820135212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127299595-8	43.0091064225668	-0.124745605282108	0.299855187521834	-0.41601950032305	0.677395733954977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65689059141316	5.59172786526992
Merged-chr11-114542326-1	3.04374266594843	0	1.38704271609612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22367689-4	9.63590265303761	0	1.28425609848466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119663663-3	5.28645605971797	0	1.30209655119262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16194342-2	3.6550558692983	0	1.36452837303468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123039297-8	29.2097422051764	-0.0248297211831729	0.31524329685199	-0.078763676915962	0.937220595877959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60054918418062	4.44599220533057
Merged-chr13-34107230-8	31.1524470626236	1.12954963811121	0.313965504182776	3.59768708046867	0.00032105955474494	0.00787831680974948	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63639093302343	5.80965499538639
Merged-chr3-65929510-6	55.6960980357472	-0.973149885989065	0.36903526196329	-2.63701056861571	0.00836402256769655	0.0964282672386554	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51768864557425	3.56224752241177
Merged-chr16-21310904-4	18.3036553482732	0	1.27817601036732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38901353-4	9.55544131850491	0	1.28960955625839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61384323-4	10.9116429370233	2.52351246123726	0.975083004355362	2.58799758581125	0.00965356572518141	0.108091484900224	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.41651361393431
Merged-chr10-94090186-4	14.9691102385719	-0.832242638089958	0.57882638883736	-1.43781046292933	0.150487839839281	0.830625760802235	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00021231851772	1.99834080004871
Merged-chr5-31887749-4	9.26064379288093	0	1.29389123965926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43556161-4	17.9073955923417	0	1.28878154870254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84465047-4	11.2959947905927	0	1.29593890012778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92487492-4	9.49529919605729	0	1.30402673586903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58723858-3	8.99531139587674	0	1.33006944663778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32394537-3	5.00060237454011	0	1.33158931913124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41335888-8	40.98206683078	1.14457627965869	0.289164713693892	3.958215596355	7.55117837777699e-05	0.00253826801581386	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1973637172037	5.3095642517347
Merged-chr2-91361450-4	10.3520728635052	0	1.29814120448686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41674476-2	5.82590672155174	0	1.30757836503139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40301281-4	9.06870252106043	0	1.29185635169833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102311674-4	8.24530118126444	0	1.30268934562791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-118044446-3	6.520029211313	0	1.29995286092219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14641865-4	13.7325875458699	0	1.30952170795346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103003415-4	13.1611791540984	0	1.29495776138355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-1163242-4	8.48871404916026	0	1.30638818082604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104337852-4	14.6498099544278	-4.97459936304123	0.965893603309989	-5.15025603854704	2.60131096715709e-07	2.73288209742519e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03655600822004	0.469435083901436
Merged-chr1-172004576-1	3.47192831339303	0	1.33785903474211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38475284-1	1.63999887304464	0	1.69762002633509	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3164224-3	7.29840257384298	0	1.30783672942363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34857842-1	2.59667747239949	0	1.35154413398798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46583608-1	1.60551010018996	0	2.43324593075311	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116618553-1	2.81672705775324	0	1.36316472908338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113661224-4	13.3901008268523	0	1.28399555297666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101978655-3	6.9309367860791	0	1.32927969625989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77385750-2	3.71171677277426	0	1.33229542547209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17610295-1	2.39220188593444	0	1.35738440442015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142068787-1	2.02108432173368	0	1.4175033682297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-164964846-2	2.50996748102081	0	1.43493606690094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29920503-1	3.66661523801536	0	1.34332127028587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82924835-4	9.51530236150872	0	1.29657057762529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13469173-1	3.02989978058319	0	1.38098894322988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133813436-11	71.8409795537501	0.364847625381343	0.259666090702408	1.40506457502562	0.16000207696182	0.868180330577686	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62495632673587	5.03486378253555
Merged-chr1-132312865-7	23.8177362153599	2.19088111298185	0.39166895667788	5.59370630637879	2.2227282415146e-08	3.52539805024303e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69102788500591	5.15134624975913
Merged-chr4-141832433-7	39.6160998065795	-0.876394854951094	0.280091012696099	-3.12896456946297	0.00175423459317452	0.0293102055038564	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49237453734426	4.59851487755596
Merged-chr19-8829842-4	13.0570572104088	0	1.28597667281421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85523273-4	15.400842065877	0	1.28764500496576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76393176-3	8.03053004571044	0	1.30577903491286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14294708-9	45.5116698456527	-0.563833757853986	0.251819489236689	-2.23903939906744	0.0251533527277054	0.223750474727013	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4941916964931	4.93650752418451
Merged-chr7-64065053-3	4.17756837643255	0	1.36423854559635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91074825-4	31.2326176084053	0	1.29286544369004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84590476-4	7.3498421588836	0	1.2923510741789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36570082-4	18.6864281380832	0	1.30195874126468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108082464-4	19.1240764591192	0.645348958376746	0.474575736678511	1.35984397957943	0.173879301729147	0.921689880537152	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3335876671172	3.29592793539725
Merged-chr15-68011391-9	35.5787691427541	-0.340311874249266	0.27406175413504	-1.24173427745625	0.214334618598325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4003908565122	5.14540248949832
Merged-chr3-20132994-3	6.10755262661964	0	1.35551397019386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117301946-4	22.6162208626038	0	1.27833594416234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32940841-8	36.6775511923009	-0.600538835892033	0.326021488403126	-1.8420222508446	0.065471895220739	0.452278693939936	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91983673774718	5.20229319819523
Merged-chr16-35739734-4	13.9936706487446	0	1.30354241007567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111033917-4	11.0823029253533	0	1.28845618401744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72983629-4	8.23825820035771	0	1.29653756360452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-89170269-4	9.90849726469099	0	1.29926342956725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44722233-4	13.3517521357511	0	1.29604987853508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88593433-4	8.10247931691475	0	1.30058989429061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88720045-4	13.1230205739972	0	1.29021556939778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63174611-2	4.12276545611601	0	1.35153778366264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56743725-4	10.6793234503043	0	1.29806678836869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73242275-4	11.3119929429558	0	1.31169007579374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50024696-4	7.09303553687641	0	1.33052935005525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111234609-4	9.83919594561456	0	1.29648528265789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69417609-6	35.3329368724247	2.76830365104106	0.41942928554796	6.60016776707528	4.10692760885852e-11	1.6976274702914e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01777522027979	4.82895319613244
Merged-chr12-111744236-4	6.48429623402396	0	1.31048667369755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29623461-4	9.44048681853029	0	1.2897998739088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25471352-8	36.2789044591224	1.73476968341685	0.363378117823983	4.77400701452573	1.80596087118152e-06	0.00012911632285364	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05307988659165	5.18976747445786
Merged-chr7-130646188-4	12.5314111846453	0	1.29219926432268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82918168-6	42.6558074968543	-0.431554677173029	0.265215808919605	-1.6271830813217	0.103698219902991	0.638494248337515	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34929857672214	5.93951748909822
Merged-chr10-59381825-1	2.24495568408691	0	1.47522253310848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108532955-3	11.3754601336589	2.2349832459925	0.717435888988699	3.11523758470313	0.00183796805010063	0.0304137402385099	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17486395055803	2.56757889007095
Merged-chr11-17992494-1	3.7000814969186	-4.40850327172682	1.0729715829837	-4.10868595370228	3.97916738051274e-05	0.00152595464581564	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83038173154315	0.306240821987646
Merged-chr9-61681191-4	12.9168582579652	0	1.28349530189694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66817208-4	11.1967393928385	0	1.29296650859503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180402714-5	16.399134696824	0	1.2824607174427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108050662-5	24.22555045644	-1.10386612751007	0.606310695434396	-1.82062783292846	0.0686634489931992	0.468701738003718	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05124243599336	1.47158896970822
Merged-chrX-99018114-4	21.0255081122005	0	1.29435321310264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140767928-4	13.178074684404	0	1.28792684366605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101537742-6	18.0314837719009	-1.93909739982879	0.50554350117738	-3.83566873140047	0.000125223100250358	0.00377959755610158	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43220388907207	1.99170652413272
Merged-chr9-106378184-4	18.5670987986218	-5.66164162729986	1.04521751443639	-5.41671140131322	6.07052061726466e-08	8.12877541507739e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58243956779938	0
Merged-chr16-45736902-5	15.9503580824263	-2.15292711391608	0.507032490857849	-4.24613245252497	2.17492090218986e-05	0.000941129167639081	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7622188955058	2.81960882153758
Merged-chr17-56031106-4	12.5777864641779	0	1.29834656921209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37972827-4	10.7640175748341	0	1.29493984755963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108880216-2	2.75270462444627	0	1.44123962552585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34956455-4	6.81152183311786	0	1.34832846697149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140381334-2	5.62317846352649	0	1.31754057391195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130065658-3	6.46133769541847	0	1.31437101731983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97775930-4	10.9610341128343	0	1.29054757630351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155413588-4	9.22191083418146	0	1.28969860029676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12423593-2	2.93021274137049	0	1.40117943070427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164513526-2	7.64300479313243	-2.19713946441701	0.635340092676409	-3.45821000397036	0.000543777336915422	0.011727285101675	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84421637629862	2.30406722002565
Merged-chrX-167338158-2	3.75262779754082	0	1.34902489158413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43871076-2	2.39643342591045	0	1.64772418615433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9599517-4	10.547330799884	0	1.29082541960395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31864128-2	3.27664029325655	0	1.40177825736681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37848986-3	8.51000130114081	0	1.29504705555636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40728906-2	6.2942402192142	0	1.32474073577183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112002776-4	11.6607808775387	0	1.29432354966305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115487398-2	3.6496332913622	0	1.34944937678481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74988982-20	107.681502997384	-0.840679388119934	0.194556357320546	-4.3210070320902	1.5531872331183e-05	0.000719309517614094	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.23381817319858	6.37892466306602
Merged-chr13-97869664-8	36.4657209688331	-0.164263963835564	0.307715025158276	-0.533818469706098	0.593467133994123	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61371261440727	5.35581599698175
Merged-chr5-28123264-8	28.4063887507408	-0.778560309977609	0.316236253300399	-2.46195779848821	0.0138180924668172	0.141130984938219	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58102047909933	4.7143807668535
Merged-chr1-33768180-4	8.55233988148903	0	1.29450147491861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17879672-4	9.88125721951158	0	1.29495558017163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57211264-8	40.6991916720721	0.583332681595486	0.309490577263821	1.88481564367057	0.0594547321539328	0.420878445166384	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08214844961084	4.71753969994761
Merged-chr13-98810417-6	22.0828042263239	-0.928273787431432	0.350142524187481	-2.65113124886938	0.00802226602430632	0.0932117702034709	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72589723404972	3.84027597956335
Merged-chr2-128445578-7	27.5116341786694	0.571851894558865	0.388198058661852	1.47309313325801	0.140725924756137	0.79226018469863	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90434385296043	4.11879267282997
Merged-chr9-90253738-4	11.500893510426	0	1.29543190119431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148084413-4	10.3445090998279	0	1.29104810024868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5572486-4	8.79426017431226	0	1.29607167674804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122817786-2	4.19364563167393	0	1.41902918732687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-81059043-2	5.28366378715991	0	1.32785160205226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64618016-4	12.4085806444093	0	1.29377213145184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123586038-3	7.15170858705511	0	1.30427901689169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41523999-4	9.40898050334212	0	1.30291214821042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26460265-9	99.6872072574669	-0.529652117762742	0.189259884151933	-2.79854402392823	0.00513335711596029	0.0665168261153165	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9030015820387	6.39728450937168
Merged-chr17-57344577-4	11.272376181033	0	1.28710064636449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148436586-4	11.2974892678557	1.60491464119831	0.799865407192361	2.00648087386575	0.0448049673553646	0.342796557405884	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19463283453277	2.0900981927122
Merged-chr5-123257308-4	12.0162148275183	0	1.30820458446355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135909150-4	12.3260781061808	0	1.28854793410487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171825655-4	19.3322476989827	-0.129166134046152	0.354383926975404	-0.364480791069052	0.715499015295127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28324534594044	5.05655880135211
Merged-chr3-27202119-2	8.74879733662233	0	1.31025288833169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105019918-4	10.8747549759249	0	1.2972174575305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80127404-8	44.5373529878791	0.923353181493625	0.334384758158956	2.76134949026203	0.00575630416135076	0.0724203796164087	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07791240727389	5.36008158147637
Merged-chr3-55660471-4	9.88553371621571	0	1.29954384507514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6517823-4	10.0700450005293	0	1.2987143764752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110529183-3	9.29095591013576	0	1.29385085357823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79089255-6	39.0245313128079	-0.802689197245488	0.379294540783433	-2.11626878569761	0.0343219539253948	0.28314637056039	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62475965358456	3.8153003928538
Merged-chr6-114894674-3	13.6945188400706	0	1.28139115060213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33673343-9	70.9932005003997	-0.208630967930657	0.326637410407042	-0.638723432415993	0.523002866177645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66825979192871	5.31029416825445
Merged-chr9-123929017-6	21.0301727209579	0	1.28356881419922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87743025-8	54.0714895077039	-0.191820264290122	0.244683365257788	-0.783953024710232	0.433067674588085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23269149582688	5.02508720650935
Merged-chr6-54780757-4	10.789794938897	1.93132424658608	1.25029505193768	1.54469478511729	0.122420106866532	0.719717886036921	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr1-138550337-6	17.4950593015916	0	1.28374000143088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-42897573-4	10.8079651269107	0	1.28801971232745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17999839-4	7.91254256195635	0	1.30567185932008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82470788-4	6.92187427615522	0	1.29827715709399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89100596-8	33.8572984411299	-0.1045603078617	0.325372959977892	-0.321355246818309	0.747941193778509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18570127987754	4.92302974945259
Merged-chr6-31412686-4	6.93070643875913	0	1.29670045046534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93941885-4	10.5071594145856	0	1.29885662408584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-37684858-7	21.3057367138949	-0.379716804853137	0.342680734603228	-1.10807748002756	0.267828355791816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53139453809955	4.30890573809595
Merged-chr13-76579567-8	32.1397122522574	-0.996060914673973	0.354719952031936	-2.80802054964277	0.0049847045869067	0.0649771605697197	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84727001775151	3.77609340533748
Merged-chr1-20933650-6	38.4921481310021	-0.687014250569567	0.269486317274206	-2.54934743076592	0.0107924722298458	0.117606173013163	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30854093605836	5.52487102559963
Merged-chrX-163851080-3	7.87583866422854	0	1.30537509103485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35949988-7	27.9437703606417	-2.10560200989195	0.450312745211593	-4.67586590049227	2.92715847705983e-06	0.000189384255289061	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78897173505656	2.40895879949083
Merged-chr8-25980877-2	8.07435560161556	-1.71907847633227	0.87720243789424	-1.95972833871619	0.0500275510348285	0.370772411242135	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03903555341037	0.581381506691384
Merged-chr2-27739673-2	8.51814452233071	0	1.30362366440347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135616259-4	9.84608174203585	0	1.28653722090654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8990974-8	25.8023858866259	0.179250658397975	0.410592857526588	0.436565456783105	0.662426518761101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41552462249853	3.74896012449841
Merged-chr1-84363395-4	8.39360657342731	0	1.30340705289553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134115148-2	11.4781240771871	0.883584375657479	0.706217629158727	1.25115026753161	0.21087965873861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97081349726016	1.96073424694151
Merged-chr8-70560304-8	33.8442960029018	0.320304370827956	0.273169609479691	1.17254760307358	0.240977271892791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15104340785067	5.44424964204488
Merged-chr11-110244910-1	4.2020707188221	0	1.34206913049898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59240782-1	2.09530215381702	0	1.51375813591048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154785533-1	2.58953737987334	0	1.39012578491621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8994480-3	8.32206066098758	0	1.30326160324477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13847779-3	9.12442268987053	0	1.31674161069369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117990139-3	23.159003964065	0	1.29265947944868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25533347-1	3.01141630403072	0	1.35687056986678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4288008-4	11.7489456075135	0	1.29577920730489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105490838-1	1.67062742451144	0	1.52616415962957	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78538847-3	8.08119796742267	0	1.29161306376627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116440211-2	4.45884644830615	0	1.31452932446526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45971314-4	8.24949775760462	0	1.30556744260652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136069898-1	2.43001589161467	0	1.47302259646263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126191229-2	2.82837620018288	0	1.39294104936188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34783853-1	3.00498994516218	0	1.62013865069901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-195032406-4	10.7504575958152	0	1.30914795928153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-99763543-1	5.57468468135913	1.4963512450259	0.649602072995101	2.30348902386767	0.0212513440194594	0.196309065068645	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2043937817618	3.77268057579707
Merged-chrX-75056331-2	3.49569166763003	0	1.4380536278977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127116757-1	2.53466190523802	0	1.38242524417841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20165544-1	4.14089875794824	3.55176273719105	1.23074933007813	2.88585388623822	0.00390353334747475	0.0540848238086932	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26637849737819
Merged-chrX-93644153-1	3.06426923035228	0	1.35964689258687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35255695-2	8.6618918085504	1.14796629034425	0.556701285666586	2.06208665203583	0.0391994869262726	0.311773329197202	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75513133628038	3.92680026881684
Merged-chr16-43580593-1	3.02487120135192	0	1.36455090095037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-66818678-1	5.11342557625167	2.20164749137347	0.919298654984216	2.39492082299552	0.0166239546438851	0.16220829328943	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02962416752978	3.08163998678444
Merged-chr14-77911632-4	8.53574943344435	0	1.30287653019203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53764895-1	2.69172884575827	0	1.37953297077668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114569017-3	8.79151657112996	0	1.29332572417653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86908046-4	7.09134555162232	0	1.29919792844457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95836201-4	11.5465798258184	0	1.29537564268082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-118179743-4	9.32909706430672	0	1.28597512874781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125756777-4	10.8536758119681	0	1.28758204340337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83080930-4	9.47968775071841	0	1.28635874564845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64376667-4	8.4671016846011	0	1.2894468195304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21077267-4	10.1130824764795	0	1.28433144661478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-42306553-2	9.66805123457314	2.57007005155291	0.68943230988179	3.72780621783388	0.000193153801364704	0.00532117550757924	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.977951900024923	3.27326069009061
Merged-chr5-96909484-4	9.55892158653845	0	1.29372405758047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82422248-4	10.5136903478391	0	1.29790465366328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135806792-3	7.54788299076068	0	1.2888157139435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134225745-4	12.1693122408369	0	1.30764819854195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118622257-8	45.544410069625	-1.68720044033291	0.331050441727482	-5.09650563076971	3.45980277244033e-07	3.46755018355653e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70330533209205	3.93578673005061
Merged-chr1-173737903-4	13.0894856913454	-0.252690623366446	0.557986019979748	-0.452861925421747	0.650648169083934	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01472012291632	2.46681188023837
Merged-chr19-11244442-4	14.1454309385231	0	1.28045050457592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25099585-11	74.2255224397561	1.76739405955901	0.241069257303805	7.33147842792611	2.2762746901011e-13	2.01007359323441e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88150784854578	6.68067459949951
Merged-chr8-94935346-2	4.7570071409972	0	1.34190644660091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42910621-4	18.3916042078359	0	1.30644736987043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106155366-4	9.84637192134147	0	1.29488151750085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21370358-12	73.4087975843268	1.07487275697577	0.199906933009052	5.37686582849581	7.57936110702665e-08	9.78816068971864e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86329004668669	6.97937047056608
Merged-chr4-35068359-2	5.0082445297829	0	1.31913095038309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121597576-2	7.46339733375381	0	1.30274409678615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13435420-3	6.1394017396167	0	1.34672465555247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72170735-8	36.1130047033004	-1.55496932507891	0.307906875288853	-5.05012862613139	4.41512671559037e-07	4.22920718364048e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92380661477634	4.29939140222823
Merged-chr6-42344486-4	24.30578597432	0	1.28615314845068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85370850-4	14.3323634229299	0	1.30006559371975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119371520-4	10.0595027198682	0	1.29880507221207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45239089-4	14.2919463984205	0	1.28616506648881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30987110-2	5.28163260214822	0	1.30520494362984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117554824-4	15.3801366891876	-2.23476481426059	0.591004921533428	-3.78129645428712	0.000156013754287616	0.0044990621304848	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33528825204042	2.26360001117397
Merged-chr10-62287876-4	20.7982507587019	0	1.28498763732259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86948966-3	10.4316084438729	-0.262226660769259	0.446131229943444	-0.587779207482295	0.556680502052807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05569932942459	3.75916261249602
Merged-chr9-95350761-2	8.69673068501644	-2.11490571153725	0.693095690709413	-3.0513906519496	0.00227783999916466	0.0358151425855182	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84503856214585	1.50521364448448
Merged-chr10-39267143-4	9.0465432663323	0	1.29505007601196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116018923-1	3.19089397724974	0	1.54883735429166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19031167-3	23.2990338761245	4.05348843635081	1.04738245684378	3.8701129753173	0.000108784929396656	0.00338579787746987	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.43014059632518
Merged-chr12-104066481-3	6.55996061606996	0	1.32313622225543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159198839-6	26.669111950258	-0.516001296436445	0.403292484754147	-1.27947163892976	0.200731020623211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.235246519567	3.47707312655603
Merged-chr11-29147647-4	8.04230200298037	0	1.29686559319699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8577270-4	9.71125386609563	-1.36713917249529	0.62744535143612	-2.17889760337874	0.0293392758591828	0.251899135500481	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85457377124943	2.82605970561531
Merged-chr5-146288225-2	6.78027781810724	0	1.32283868824612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6624528-4	10.6355488625414	0	1.28684952881816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61134231-4	9.05497015147898	0	1.28900591967807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41483186-4	12.6502320639429	0	1.29755343169802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117307844-4	9.63710048569705	0	1.28587123054052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166717444-3	13.6758035432438	0	1.28351550865476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86862450-3	9.33369820217066	0.320604085993679	0.838111892314633	0.382531364765938	0.702067268908785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5900606099384	2.03169262342392
Merged-chr2-4573511-4	8.76327549782699	0	1.30265844693556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139974511-3	12.779635332559	0	1.29720214576956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-93520956-4	8.93592080572289	1.42329788542355	0.927574455091481	1.53442979979777	0.124923951133047	0.73032274015087	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84549803888929	1.81967111503587
Merged-chr15-101379357-4	14.9024494025064	0	1.29192519857085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80034199-4	11.2101478092209	0	1.31769183507826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125273847-1	2.90849854247787	0	1.36909652578484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119832600-3	4.58406822996562	0	1.35087335841698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29496589-2	4.0149114366225	0	1.45976202030855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131174685-2	2.92768863340341	0	1.37044329353654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38729816-2	5.89157015708492	0	1.29706626522369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55217818-4	7.87096247066199	0	1.32466907761239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117320810-4	10.5873801928444	0	1.29880115404184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173769364-4	9.54487564658737	0	1.30838280000249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143050465-4	8.8408149495915	0	1.29693754586968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81102785-6	20.8139284857755	-1.4341981207596	0.420951630471313	-3.40703780896112	0.000656720291815694	0.0136105436692002	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20481289090096	2.85875042671539
Merged-chr2-160622075-3	14.9310308719548	0	1.29508547276621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82569063-4	9.0596519446841	0	1.28733348122171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94462965-4	29.2647535482217	0	1.28415697718314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25075011-4	11.5520228391821	0	1.29736734850611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-110733508-4	7.80264064490807	0	1.28729509629925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31121816-4	7.71485819776228	0	1.29019871791702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73645287-2	6.40960264150072	0	1.293211688848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63975491-3	8.10255681401912	0	1.29852022689604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125410683-2	11.5048364434456	-2.56097989685398	0.729448103049381	-3.51084592056388	0.000446683220834464	0.0101034827790408	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2954890732446	0.95685815637649
Merged-chr3-69657788-4	12.9547795128413	0	1.29419469332359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85408322-4	11.7499862461384	0	1.28966742420384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84037093-4	9.70923880832138	0	1.29827245542867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11999232-4	11.720190088641	0	1.28479249133568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8881943-10	131.374080080497	0.805924526370321	0.20352780837547	3.95977597755853	7.50201043050218e-05	0.00252563819470168	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.58607666625291	7.40321754582252
Merged-chr14-20824739-8	24.049872657074	0.0499125458351936	0.303521423781386	0.164444885680108	0.869380930830716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56641616368015	4.69882786879907
Merged-chr1-156468631-9	30.9905611905326	0.0587403550051204	0.354867130634369	0.165527742454238	0.868528615685677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08547423300431	3.91126558230745
Merged-chr13-19828300-4	10.7994108811574	3.41766300267776	1.1134459964344	3.06944657722258	0.00214455756783534	0.0341884017633004	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr12-44181467-1	2.59489091484002	0.0945443405684809	1.38521837852333	0.0682523001674777	0.945584794485421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr13-34007414-3	9.46084076851673	0	1.29143052433542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18626658-4	13.9290189261043	0	1.28702350573536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91380495-1	2.96404735758105	0	1.54232785820629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101712190-3	5.11209709930499	0	1.35093471732993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52872847-4	13.2047173861495	0	1.29893273082247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97251818-8	35.0015433563667	1.22005143549408	0.290847662649748	4.19481258463241	2.73097299240651e-05	0.00112662980531437	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95174091943888	5.28776437310509
Merged-chr1-43302988-4	14.6099711251193	0	1.29006499425256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27600866-4	9.67500855005964	0	1.30953021718112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17652295-4	14.5970007791782	0	1.30055761219808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146897162-4	9.68962056335907	0	1.29204333489328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104369915-8	40.619438748164	-0.508418623333688	0.277704793904453	-1.83078806881747	0.0671321818644186	0.461090977098202	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16422116511645	4.70870403032139
Merged-chr2-160083822-8	32.9039190732001	0.384572797644122	0.271069321814503	1.41872490427851	0.155979233622989	0.852582099567366	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82465876706312	5.30976694897284
Merged-chr3-88464624-4	12.6564707991341	0	1.30511334050357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171053529-4	10.5553038747844	-2.71053316445839	0.973222300116082	-2.7851120593261	0.00535092270813166	0.0686014116707027	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81963824802412	0.563523181795778
Merged-chr8-75193247-4	9.94372828614424	0.151297049843261	0.808405337131409	0.187154936878735	0.851539155640078	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43732479419999	1.15868211970568
Merged-chr14-45634271-2	12.3308143922338	-3.27953237666326	0.707472410118052	-4.63556222088721	3.55968626122912e-06	0.00022259450567108	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96722663108046	1.50954942419772
Merged-chr18-46962824-3	8.43596789667354	0	1.31805429312833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127257202-4	10.783328661612	0	1.29672687288536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73984853-5	16.8505679708827	-2.22136138483015	0.468661679003705	-4.7397973513695	2.13932071728089e-06	0.000147260163561869	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41078682663475	2.54410203638168
Merged-chr13-111796670-5	42.6297307558261	2.0741036339149	0.692078465490541	2.99691976753645	0.00272722480184862	0.0412435158300393	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0268508232981	4.20371525334702
Merged-chr7-97361707-2	4.65370561020221	0	1.33248268911194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70333764-3	12.2275229074862	0	1.34406721736568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138973692-4	5.69574325614218	0	1.31557888150341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6363377-3	8.28718196879248	0	1.29819262562132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8029049-3	6.68503817704074	0	1.33579445942965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106330319-7	34.6469914625377	0.742654253012032	0.352862608840184	2.10465556396878	0.0353213011530927	0.289163836776496	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81645264296841	5.25832345005649
Merged-chr1-154118088-4	18.2679287515321	0	1.28376949267598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4144084-4	11.419212126596	0	1.30717373355074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135478188-4	8.62591716179537	0	1.28635306100836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84243296-4	13.0440550491572	0	1.2851376161689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47788472-8	44.3818170650204	-0.115015994536995	0.286913712725056	-0.40087311772098	0.688513542774774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79294479241804	4.67842794098465
Merged-chr12-69425034-6	31.3442970317673	0.417774807072498	0.274364590125885	1.52269943756522	0.127833918759865	0.74153885976761	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9847111476118	5.37121561110795
Merged-chr6-83040792-8	41.5972526076722	0.984268723443396	0.279936580565939	3.51604181723421	0.000438031986662328	0.00995951224789022	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75129826402464	5.66979606574012
Merged-chr3-115695577-12	51.9783046096966	0.586501315512307	0.3722722940766	1.57546324248247	0.115149556508454	0.688558100256354	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48824359344406	5.06331699372031
Merged-chr6-134531486-4	8.18304608523504	0	1.29979886393552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88042640-8	36.5774465869013	-0.667199317885671	0.279099029588251	-2.3905468925133	0.0168233006550922	0.163737772506353	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18859366453522	4.52044856830705
Merged-chr13-81233056-4	9.07435194748505	0	1.30593186212224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108627595-4	8.0134624910226	0	1.29499696752028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124577099-4	7.92505958990415	0	1.37368042431087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165738085-4	9.08259617895255	0	1.28705794437162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51166322-4	11.9188417840162	0.649875740529051	0.938455278338477	0.692495162560807	0.488626422746752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.668152277665589	0.989878296978726
Merged-chr6-145302272-7	46.061732946341	0.777631971577777	0.377737949496758	2.05865461125571	0.0395273371971734	0.313807967013302	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94748541565443	6.17710685376428
Merged-chr4-144996028-3	5.10300651360244	0	1.31370087340936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118012399-6	25.9260212537593	-2.28290812480708	0.468542359320326	-4.872362294241	1.10271714283444e-06	8.65043870536124e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10183651781079	2.23921600458732
Merged-chr1-88642977-4	9.17397914992548	0	1.30140084603304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87652458-4	10.6046011087012	0	1.32308381383008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106353972-4	13.9962724181228	-1.0697525603044	1.03644472719066	-1.03213662266778	0.302008119682833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30251751894576	0.469435083901436
Merged-chr16-76232430-2	3.20466464697034	0	1.44772963811671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48101045-4	7.30391465286071	0	1.28695243669223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91954048-1	3.59447320805246	0	1.32280103233165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100211205-2	3.7077218025671	0	1.36920522313769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38528097-4	10.049154741102	0	1.29449851285075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9491222-4	12.2503561734823	0	1.29720738032811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83647236-1	1.418143859473	0	1.59466409904552	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17254184-1	3.40138158006485	0.443152302745229	0.920312296991182	0.481523830762716	0.630144246819398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20213191238651	1.62745902464378
Merged-chr7-80202113-4	9.68864838860389	0	1.30727317403754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59600389-4	11.8871123519295	0	1.30230375324174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33619409-2	7.78958137231284	-2.17594817765597	0.84751666248241	-2.5674399973241	0.0102452518951936	0.112955328217196	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28128993468617	1.41293295987929
Merged-chr5-129729165-1	2.86456398976026	2.50872498390578	1.33887376804579	1.87375766392638	0.0609638340435369	0.428820527385249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.19380919831911
Merged-chr5-43745316-1	1.86023352368858	0	2.06582408005549	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67043418-4	12.9944507565023	0	1.2866648248199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119419522-4	9.7477064107801	0	1.29539433857979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75307023-4	10.8284313931431	0	1.29183785558253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35505704-1	1.81253889856587	0	1.38876433550068	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118162962-5	30.3930685395907	-1.19824484851793	0.314277830422054	-3.81269288676444	0.000137460876405	0.00407925450933747	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.66371629148518	5.27794108470527
Merged-chr12-9002229-4	8.10853058792489	0	1.30120132411558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95688630-4	9.39629318852686	0	1.29681066049203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64266788-4	8.0801418885196	0	1.29096752961056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-76268313-8	24.8204433049145	0.452879123082736	0.399524345951731	1.13354574676521	0.256985141531677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9242879494189	4.35429883104165
Merged-chr4-141651521-8	25.6312876328077	-0.262937183112055	0.340747121938078	-0.771649021175992	0.440322331823622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86703424048379	4.61436229650698
Merged-chr15-67992584-3	9.22091519740565	0	1.34562942764863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64382613-3	7.79239450006878	0	1.28910578612111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79017440-5	23.3866142723223	0	1.28020607057794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8984683-10	95.1459314260805	0.241088250441459	0.263463547873067	0.91507251150209	0.360153564634135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.99216969987607	6.19933025405303
Merged-chr2-72390117-4	8.53802112011843	0	1.28812663740514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100150744-2	5.42887146458567	0	1.36659105573658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82446737-4	8.95091382075326	0	1.30033519973776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108246505-10	99.0364415404454	0.0577731995661557	0.192382954724805	0.300303109746898	0.763945961408949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.76124264786337	6.8106879182878
Merged-chr10-86972161-3	9.37663109033516	0	1.28582398408458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20372051-2	6.5139433847658	0	1.33171083960123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47399182-4	11.7407063693796	0	1.30165530145589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-59011912-4	14.4639178721413	0	1.30403936159065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60659067-7	26.5193058064219	0.563951351926145	0.433847743841607	1.29988310399521	0.193641036823004	0.994941593979872	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34015842110232	4.84959010222576
Merged-chr3-52612310-4	7.89798338434552	0	1.29645421460566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37194159-5	13.1307952965386	0	1.28378623012644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172463541-4	11.2907908893087	0.820632734317587	0.756519646306194	1.08474741974572	0.278033539220977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23888134884341	1.9071925850333
Merged-chr11-20403666-2	4.74559879223101	0	1.35386289934822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35042085-2	14.3145168849736	0.538258031135791	0.429114730667082	1.25434526635578	0.209716537487201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15100638979019	3.90238643930288
Merged-chr4-112288612-2	5.54182956116173	0	1.33794209388793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71543186-4	11.7726478469772	0	1.29361623423154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98677610-4	8.17106382020284	0	1.29928074129427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28754433-4	15.4687180056712	0	1.29167506866126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53435452-1	4.31961085327889	0	1.32563212739487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35918402-4	12.3424584609415	0	1.28905816415465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51307742-3	6.07030953153964	0	1.31670970763034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120742702-2	10.2045617940863	0	1.32621273838938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92977601-5	69.1205373851085	-1.02850284384115	0.479800220744188	-2.14360644154333	0.0320644342157668	0.269777365755099	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82085596617822	2.18716481305495
Merged-chr8-41025798-8	31.7247167602736	-0.441859612873584	0.371613833263517	-1.18902896857517	0.234428267737681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79684992435361	4.48912730195289
Merged-chr17-13867110-4	17.0511255468469	0	1.28161253315169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84679075-4	12.8256021661114	0	1.30201294246425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105409296-4	7.75696165016042	-1.57857521623282	1.10236967223055	-1.43198353147607	0.152148534480812	0.837810578426154	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09358799995118	0.306240821987646
Merged-chr7-141092520-4	9.72630815391282	0	1.29582705841955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128760844-8	43.3218638737368	0.829208950061511	0.279422620681946	2.96757989041038	0.00300154268599868	0.0443652586200564	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99558558205562	5.79644311228465
Merged-chr2-91537777-7	25.4901636971375	-0.135514664304309	0.336664996308525	-0.402520801955073	0.687300782310908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95164226452083	4.0172491825535
Merged-chr2-25587999-3	7.58785243107601	0	1.32013071966144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59599100-6	31.8817161192366	-0.833218265510807	0.394413087329807	-2.11255227647675	0.0346391070889754	0.284971307042199	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22972566286004	2.93916387097019
Merged-chr4-95303498-7	30.5853478671303	-0.731311410772927	0.376306394754629	-1.94339352444377	0.0519686290800113	0.381266648238735	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58592599588821	3.83636178788826
Merged-chrUn_JH584304-3592-1	2.13198882674507	0	2.43325267422467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-17090338-3	9.24982765744832	0	1.29711985729077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56311243-4	17.3994894677443	-0.335819662895448	0.510498927847938	-0.657826382341548	0.510649699713382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20837142399004	2.86347454477436
Merged-chr4-149303422-4	7.6807297413161	0	1.30401630669086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65137976-4	14.3924081352742	0	1.28328700811687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94239354-2	3.99519074259526	0	1.35621766206859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84622939-4	18.9851951799432	2.05483487748211	0.70289282902536	2.92339712774047	0.00346234612715863	0.0492920413998491	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0853949393914	2.825212231368
Merged-chr12-32305891-4	11.1833630659687	0	1.29993392229283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99186934-12	195.715572706017	0.295867055350001	0.178136680754094	1.66089911464346	0.0967337101195525	0.60483791230239	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.96025728034142	7.24821104296405
Merged-chr9-107247673-3	14.8242330580642	0.489157797501301	0.449784061238818	1.08753919859685	0.276798584834461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62059048064386	5.25601903531158
Merged-chr4-101213753-4	10.6432978186049	0	1.28937866941897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72164501-4	13.048399977826	0	1.2999393635721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106972865-9	30.1922712813718	-2.86162115522745	0.549555595310282	-5.20715498058347	1.91757930406568e-07	2.12383283395722e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85994638446503	1.81579024618537
Merged-chr5-76705624-4	8.23897575803244	0	1.2942062589644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82513312-4	7.41305744938616	0	1.28817784719072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5034795-4	6.85392146843284	0	1.30042386725391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101201648-4	12.4033033462351	0	1.30791494677491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38467577-4	9.67909307481264	0	1.32364255119723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105271421-8	32.6043609115818	0.5385684594481	0.261560104181677	2.05906195493031	0.0394883038165565	0.313612384686036	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86366013825221	5.39312402027632
Merged-chr10-117840708-4	10.937644193294	2.83348113446116	1.1175218244667	2.53550407018972	0.0112285623603072	0.121139447910952	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr9-22366751-1	3.73975628981507	0	1.36397817472636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113026854-1	3.88150661949561	0	1.32919335127967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141512301-4	20.4034832460432	0.875455153608665	1.21735815240923	0.719143459856972	0.472052532070867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.563523181795778
Merged-chr13-94295104-3	6.25044765310666	0	1.31704604849384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192759610-2	7.24685824783135	3.17338778561744	0.989491242320213	3.20709032065439	0.00134084890455334	0.0237836896082905	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	2.61093010937348
Merged-chr6-99388858-4	13.4847687971044	3.13550876987091	1.0904729902974	2.87536582544403	0.00403559625044293	0.0553365586058182	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.13132003301738
Merged-chr6-124894251-5	15.0228763281169	0	1.2918229928998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84985864-20	246.165321974989	0.246269195716166	0.154885857198506	1.59000440821748	0.111833811393115	0.674822496415089	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.36471163723774	7.61422447143393
Merged-chr8-79447507-4	10.5650299716326	0	1.30287920485326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66041494-4	20.6614384087105	0	1.31750956553872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70728894-6	18.4076490147116	-1.53044458774126	0.511096234337851	-2.99443526466992	0.00274953394659759	0.0415232367169786	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9801338176918	2.88685225841994
Merged-chr6-54248530-4	8.27187925515125	0	1.30221686797858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55631324-8	29.1414380793968	1.23809879576094	0.328980274336785	3.76344386683035	0.000167589358035934	0.00476143225661571	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0936000514662	5.4511989664432
Merged-chr18-58567982-4	15.8170614039111	0.0676122519361629	0.46933870168627	0.144058548108735	0.885454237034509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20309028654895	3.22182750332539
Merged-chr14-70213279-4	9.98967543404206	0	1.28840399428323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56265244-4	11.9657066003046	0	1.28530805859418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-80081181-4	11.9907334476065	0	1.29627963944259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35705726-4	12.495795982321	0	1.29048760029176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63246736-2	6.7429602204328	0	1.32671669249877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31273027-1	5.32915275847192	-0.696782619943256	0.586385743724507	-1.18826664426995	0.234728374689157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67801437252949	2.65785500005984
Merged-chr3-69157766-4	14.2411503465089	0	1.32069796493498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123145450-1	3.71896222906585	0	1.33848461787637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60702083-3	21.8910047789914	0	1.32207713509351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4055725-3	11.2569541516542	0	1.28583796908333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90744586-1	4.56935010819666	0	1.38740450206677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-73089719-9	94.8179342522208	-0.440796924069128	0.204567900934481	-2.15477072431957	0.0311797802378081	0.264161016390484	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.92520658045887	6.398179908262
Merged-chr1-36126343-4	11.8806365594079	0	1.29830362822426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10858082-4	8.95835165569621	0	1.2929330981332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95694021-6	22.406771690571	-1.74992864782848	0.532250626848261	-3.28779067521393	0.00100976888241416	0.019163463874562	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14669067188159	2.6960750002622
Merged-chr15-90623701-4	12.4078719312795	-0.218665705302664	1.22170164786157	-0.178984538234364	0.857949842348927	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.382164212378408
Merged-chr9-55272202-4	11.1262906801021	0	1.29601382245868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87585865-6	30.5923525255776	-1.26129360788121	0.418298100560785	-3.0152984347533	0.00256726514038831	0.0393065857225433	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58126431880682	2.66828971316851
Merged-chr1-39408841-4	9.73227389907003	0	1.3080089367943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65538407-4	13.4958600477142	0	1.3049931766092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10831035-4	6.98834838546136	0	1.29756977528786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124671639-4	15.635193895916	0	1.30111491788135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13443724-4	12.170937966739	0	1.30654097328142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-74871479-4	10.2537969567255	3.14622559047244	0.972917293783454	3.23380580299635	0.00122152484440418	0.0221481027975681	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.04937768295532
Merged-chr3-84313226-4	7.49574919642432	0	1.29143279466293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93810173-4	14.1708291051126	0	1.28512638113893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35380094-4	7.31615960702044	0	1.28903049448754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14971240-4	17.8360867371627	0	1.28143659893058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41361308-5	24.3774723730473	-1.20986042051122	0.421459590357129	-2.87064394355347	0.00409636645170872	0.0559417266778178	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37298163997763	3.00467572908896
Merged-chr14-66845693-8	46.980946299907	-0.814306436610359	0.328084355987148	-2.48200324626956	0.0130646085133757	0.135489590210292	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06509497996052	4.18583338965376
Merged-chrX-121331498-3	8.0475302594365	-1.94863908941428	0.573570453527503	-3.39738401347211	0.000680334217304134	0.013971439272142	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14021679730782	1.94701576741112
Merged-chr12-82246640-4	12.9396801266099	0	1.28691529403191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70714481-4	8.97886183919857	0	1.28886530474187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-22081571-1	7.46579290458304	-3.3776799509842	1.05460837745889	-3.20278126286349	0.00136107318035099	0.0240575299007886	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69577094695978	0
Merged-chr15-90618128-5	35.5153926433929	-4.06833843114283	0.562130654263822	-7.23735380784527	4.57523485421773e-13	3.60208791305677e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20341885408653	1.67333134268571
Merged-chr3-32398646-4	8.01217178639359	0	1.30273276703719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27075676-1	4.42905797393055	0	1.30842455180423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125474304-4	11.3998761525759	0	1.29194988553343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58497170-2	4.49578390746862	0	1.34084841115766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35420258-3	14.4961013007535	-1.84619425586397	0.664220016435518	-2.77949205109991	0.00544439860002077	0.0695995354406285	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94634081112943	1.5122114716189
Merged-chr3-146111134-8	64.5285149795762	-1.36167376030502	0.248504313664029	-5.47947735887579	4.26584028744228e-08	6.08440344953616e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.36728038963655	6.01852263093708
Merged-chr7-80500307-4	9.26853606239373	0	1.28920986422699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148496149-8	29.9925690489946	0.265430352879958	0.303096710196745	0.875728254218472	0.381177781562591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66494232997635	4.92835900795467
Merged-chr13-9330815-3	5.8826096004691	0	1.31625239212071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5511637-3	7.68541521667543	0	1.31364364426357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46467094-4	12.7977436156258	-2.52218100622986	0.581908891288729	-4.33432285360702	1.46209467846552e-05	0.000686858654629821	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74728153918796	2.08137696679909
Merged-chr2-102974240-2	5.33235742996453	0	1.32366617511621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91139703-4	8.86355404670861	0	1.29241126028418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153764321-2	5.2464049719678	0.559722735311601	1.10806963424413	0.505133177567323	0.613465300028341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	0.73596151290311
Merged-chr2-11439496-4	11.2317212130499	0	1.29000313493771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69420390-4	11.3424321383258	0	1.28555275771548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88641177-4	12.5855925333384	0	1.29483588088195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100664449-4	12.4119455016342	0	1.28883873215973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75342273-4	8.14444916898033	0	1.30909590056547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149937985-4	9.47386732662714	0	1.28936651102974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125406681-4	8.96449531787846	0	1.29494794721605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36471035-4	10.7644784448338	3.13660987930277	1.09498997236371	2.86451014024529	0.0041765478224714	0.0567284751625891	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29358708977899
Merged-chr8-126584424-11	102.91256447318	1.27931879216554	0.215669243336292	5.93185552272146	2.99530144297337e-09	6.31390219653348e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26678383394516	6.5713366248931
Merged-chr2-133497340-1	2.55303342613466	0	1.36101063688598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70943164-1	8.10255039138682	0	1.29090812221953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64689031-1	1.94006286140507	0	1.46516874753992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138016055-1	1.97525108691504	-1.99388942282106	1.27004173116783	-1.56994008455741	0.116429050964204	0.694429788636991	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77771372394197	0.469435083901436
Merged-chr3-104523770-3	11.9342649799687	0	1.29876193521323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95872351-1	4.49584987141423	-3.56161959655996	1.12307695245871	-3.17130503725737	0.00151755696616517	0.0261859724085105	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53352659949344	0.306240821987646
Merged-chr15-102451085-4	13.8631956708702	0	1.29098979442039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7253470-1	2.35704460659362	0	1.45976586780012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17722286-1	8.00386478593397	-1.36393728748192	0.585466588549716	-2.32965862468871	0.0198242009949285	0.185991706850624	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35801523868306	2.69100147567081
Merged-chr4-141870816-1	14.1329569855507	0.109471807396455	0.524734401102544	0.20862327144254	0.834742342312932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82574174130847	3.84178785492734
Merged-chr14-74919357-2	4.87867988430719	0	1.32811348305308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10531787-4	9.74791480187144	0	1.29423194055176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35217739-1	4.88000661497864	1.60779228698997	0.885567636699407	1.81554995955178	0.0694394356562277	0.472419506756049	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22169674737191	2.22772873920999
Merged-chr17-69085705-4	13.7946843374214	4.73711957165226	0.980307514317668	4.83227915982005	1.34978803794594e-06	0.000103041178887401	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.05338998445488
Merged-chr5-21136750-4	12.7445393746532	0	1.29802958706964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69403708-3	13.6532928721033	0.606303652368211	0.472182894782628	1.28404408348449	0.199126531222734	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92140606789245	4.49931393972787
Merged-chrX-102079206-1	2.04020629504575	0	1.43373438209838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94509433-8	38.8735796845547	-0.153997430077704	0.254755073654284	-0.604492102428887	0.545516518310441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63228042747686	5.39554449856021
Merged-chr7-16052955-8	48.3934331862962	0.75783872582227	0.317262583104301	2.38867980713984	0.0169090318894507	0.164425237775006	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21638385501129	4.99843938490996
Merged-chr7-7188376-11	40.3941673024872	-0.127131568156752	0.296441784197267	-0.428858463731792	0.66802622937751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91790338912752	5.80673272979004
Merged-chr12-70136523-5	18.5908860709069	-0.246698851239367	0.497478369734324	-0.495898648560571	0.619965919697944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20101532347025	2.70784326063277
Merged-chr6-72938095-6	28.1111258442122	-0.60355579045438	0.379497347029767	-1.5904084578674	0.111742765092584	0.674544362839724	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03112414722947	3.52666774073895
Merged-chrX-85710568-4	9.05468621056496	0	1.29554931444365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41550149-5	25.0512420679465	-3.32286354175637	0.590860717901336	-5.62376790516515	1.86836639654935e-08	3.01457458145466e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39691806414398	1.56763655772049
Merged-chr3-107106213-4	16.176662650256	0	1.29199416476065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115977861-4	9.37347400946885	1.94995556354668	1.25916112251539	1.54861481082843	0.121474343403803	0.716219655694748	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr4-42965603-8	57.3790621233074	0.00850294079293087	0.280516441016341	0.0303117377438692	0.975818435509153	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.90487569576842	5.87222186688851
Merged-chr14-54442737-7	67.3752791184085	-0.532128330907951	0.360375652169728	-1.47659345936426	0.139784646037983	0.788436270798201	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9582408922072	4.42107133733669
Merged-chr3-79491828-4	23.6165514024114	0	1.2912726442413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75737377-8	33.0303210478275	-0.338743604971268	0.340098429447895	-0.996016375380426	0.319242188821147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07326828227039	4.6803126746554
Merged-chr1-100180244-2	7.51968307144789	0	1.40560801757862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129508164-8	72.2826530811375	-1.24863036737217	0.350661634602095	-3.5607840840331	0.000369749037716415	0.00872260672152233	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.72872629492201	5.31782250520081
Merged-chr17-70707159-7	27.7972895000393	0.152610112344889	0.298553683922643	0.511164727025881	0.609235715448674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93587810382514	5.05172885703403
Merged-chr4-59575369-3	9.36764730820368	0	1.29786872468133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125305423-3	12.4665212490198	0	1.3355881130471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101675858-3	11.059129189422	0	1.28675381107295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138267811-5	14.1374607870559	0	1.28649936428505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139668583-7	34.0430128909722	0.362815390082526	0.334932579933272	1.0832490232954	0.278697905334789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70472967221414	5.22527816958312
Merged-chr2-69129014-4	12.0590763563214	0	1.30378738210266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80661938-6	13.2958609846083	0	1.29328619432186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35709803-3	13.199611915203	-3.08113008471132	1.06879304349377	-2.88281263006675	0.00394141808091888	0.0545091864371905	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79813439927787	0
Merged-chr5-137850459-2	5.02490553168447	0	1.36004901258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13690575-4	9.24827637673826	0	1.30298195223432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88300476-8	44.8047167513656	0.662023232509557	0.243508367733518	2.71868781623981	0.00655414344502517	0.0802035688312013	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71827914518639	5.36779784989786
Merged-chr7-75700975-5	12.4222739569743	0	1.28569518312355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59728202-8	105.670533701871	0.366913174337786	0.301618222355044	1.21648211925963	0.223801318425203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67124324275206	5.10226966636664
Merged-chr13-95844469-3	11.0963481795264	1.92834302671415	1.2546067558222	1.53700991786101	0.12429088067786	0.727313682168479	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr11-117879011-4	9.66389894091805	0	1.29368421725089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37218829-12	84.78800119886	0.375746119055833	0.198125133897539	1.89650909838704	0.0578927580470553	0.413630020483585	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.29953581841619	6.64797519425983
Merged-chr9-113725780-2	5.59097562948453	0	1.30059254983781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48581584-2	9.00853508902869	-1.21393039417176	0.54299762490033	-2.235609031245	0.025377392493229	0.225008288990847	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64817034758288	2.71230632646541
Merged-chr5-3492038-3	4.5574165114463	0	1.33525590357675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26128611-3	9.08263896300957	-1.13124050935943	0.815844620000356	-1.38658818312602	0.16556737366607	0.888200114898859	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97340637056651	1.07938469868934
Merged-chr7-125596570-8	41.8658652598974	-1.84836648151127	0.282553557058975	-6.54165001761235	6.08437578324096e-11	2.35260130137079e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00165958157678	4.17202303034908
Merged-chr13-112748282-6	31.7138011917602	0.478070080952815	0.372958840814344	1.28183067040042	0.199902052646315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57240950873959	3.96330918875812
Merged-chrUn_JH584304-2362-1	2.89992780722599	0	2.43325244690264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53187381-3	5.61786651409505	0	1.33220441488636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93898723-3	15.1815785708588	-0.505344996976012	0.695710860153707	-0.726372155329534	0.467610656244844	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21396531817346	1.66127991928328
Merged-chr13-37121822-3	5.83404772169044	0	1.31345094011848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65497119-8	28.3440919059409	1.12364257565543	0.291716275455168	3.85183368292427	0.000117236640047811	0.00358997634294645	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32129875100908	5.45967561416
Merged-chr10-9722786-4	14.4278188900146	0	1.31417756304842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128168146-4	13.2444309109586	0	1.28779066999639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5702544-4	9.08149443465416	0	1.29176520628515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53710782-8	31.6775565820131	0.430221320417803	0.361125152170039	1.19133579545085	0.233521786891282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35031445363341	4.38548076415151
Merged-chr18-64989667-4	9.62229430300393	0	1.31058864916301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23821874-4	15.634679898603	0	1.29063625033384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120948339-4	13.0103317204374	0	1.28381257252961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160060282-4	13.0913292934543	1.12888875332943	0.606132829162043	1.86244449898891	0.0625404617229959	0.437087594839668	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91905912094892	2.43491183200938
Merged-chr2-31172233-4	9.98795320733642	0	1.30824357117974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123949628-4	10.0286682691419	0	1.28686034908895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94372917-4	9.0839440574991	0	1.30576299766366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129713773-8	33.9994382707121	1.26395020823937	0.339102245362817	3.72734249189953	0.000193509417712617	0.0053254731413414	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25763422607668	5.05164866455279
Merged-chr5-52424245-6	22.9782575168478	-0.641501965728546	1.03905649431162	-0.617388918928362	0.536978229212629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00438675778585	0.469435083901436
Merged-chr10-68239354-22	122.384261347953	-0.0030320317309352	0.194898884786572	-0.0155569475641458	0.987587852389169	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.87099508907015	6.86025394919382
Merged-chr3-126612974-6	20.5632361911805	-2.42713492400075	0.727823032871394	-3.33478718641983	0.000853647022603729	0.0168019332346576	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43286364430829	1.03956264035389
Merged-chr8-126571216-4	13.5418882968763	0	1.28760976835697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52424802-4	8.14729872874284	0	1.30857720744034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94691899-6	54.2893703855114	1.09837953065346	0.310771289123791	3.53436616925041	0.000408754375992053	0.00944500122120817	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61626737845712	4.51932331495018
Merged-chr14-20885694-4	8.43099719333233	0	1.29904438196089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144203070-4	10.7857531287002	0	1.32092729093924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136450025-8	33.0893999575669	0.802680554649806	0.303184138142704	2.64750181050698	0.00810889255328187	0.0939679337435918	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8610691092931	5.73659617403181
Merged-chr8-84974401-8	22.5637216801237	-0.425008710543821	0.342508541623273	-1.24087039852948	0.214653629585566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71478780906401	3.9352559887578
Merged-chr6-101556470-4	10.1329824034828	0	1.30342540781819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166301428-2	6.92485368200935	0	1.30429473573728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117727713-2	3.38949751345992	0.827863890162256	1.03546262909095	0.799511123727423	0.423994099204779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05225683970354	1.04885222765555
Merged-chr13-81238139-4	9.21497081010505	0	1.29891698266606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31401108-4	12.2687420801673	0	1.28934120178096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96457567-2	2.71547240870904	0	1.48378292915725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79210210-1	4.74519825450648	0	1.33316484284038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110887688-2	5.11648304669534	0	1.32864386086171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122830624-2	4.43701156595708	0	1.35454903283853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143472180-4	9.65348043147706	0	1.29097242854936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39833868-2	3.41444705735838	0	1.42233521303946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99052548-8	41.941037037636	1.00762777329698	0.290601199248474	3.46739027885229	0.000525538243880525	0.0114130349234353	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14053740560084	5.12743011313747
Merged-chr3-81058651-6	18.176607050217	-3.17427615247136	0.742045431100874	-4.27773828856019	1.88801806417497e-05	0.000840241342612053	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.201080119377	1.31345086927531
Merged-chr13-47231312-7	42.9048128524018	1.5191197338162	0.207627794233459	7.31655287012335	2.54421811224184e-13	2.15914904886435e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26236696674658	6.81873491755144
Merged-chr3-41618583-4	11.7061920183788	0	1.2995400470456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67186454-8	56.5290066933323	-0.0276762426035566	0.255544538811955	-0.10830300945669	0.913755335458928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.3768497656347	6.29481269356547
Merged-chr8-86881398-7	35.3687838973671	-1.26663216444278	0.363326384098063	-3.4862102502881	0.000489915791177679	0.0108172906232747	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46080875253681	3.91344923213719
Merged-chr9-45314125-7	37.3975029220573	-1.08363234610043	0.350334520505168	-3.09313608187364	0.00198053295155045	0.032177997576334	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66564166130974	3.53698851098525
Merged-chr9-75547206-10	32.0758033509397	-2.15850282477798	0.485404724833691	-4.44681049513377	8.71546590456239e-06	0.000453801462151023	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52402720315851	1.38233238432098
Merged-chr8-120768778-3	7.32413940524619	0	1.2901696561623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4112010-4	27.564904806536	-3.36216790288322	0.576708435900774	-5.82992669013377	5.54517315160216e-09	1.09143037579697e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87365071249216	2.69949452834228
Merged-chr4-128981305-4	9.2880228071298	0	1.31864295372113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92923730-6	27.9138101033091	-0.564700250961746	0.440666416657717	-1.28146877006144	0.200029062480174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05441775632567	3.3667164112835
Merged-chr15-10869262-5	16.9900452413446	0	1.28046113686032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9945991-4	12.3329818785751	-2.60931884796271	0.560127058276907	-4.65844099013826	3.18613108065621e-06	0.000203122850338108	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69443499045814	1.97634481356229
Merged-chr11-59518396-4	8.44196176361427	0	1.29641976723399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67636435-5	23.0323242315223	-3.338112985762	0.60067846596188	-5.55723764862555	2.74077486784367e-08	4.21076389923156e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23994737484857	1.47158896970822
Merged-chr18-12947903-4	10.8020459529309	0	1.28766822666675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14869414-1	3.2981698835543	2.71348540032216	1.2704260034579	2.13588622472815	0.0326886886775864	0.273680339567657	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.963545719069792
Merged-chr9-56100193-4	9.17503226671342	0	1.28627043372074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55230626-1	3.30244117616389	0	1.33748162577989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61056487-4	10.0980693156967	0	1.2852377689804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99647100-3	9.94785167230857	0	1.30342134191521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46432425-3	7.6077946395555	0	1.32258198469702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119917292-3	4.76772271960471	0	1.32619943667177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70326803-6	26.9436287232842	-0.783947528453162	0.359473091427507	-2.18082395358167	0.0291964401439016	0.250946893203594	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51696735999001	3.48407301699138
Merged-chr4-102625074-8	71.1785445147263	-0.342024817464692	0.353505580993546	-0.967523105302647	0.333282596495701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84499881815878	4.32001522156284
Merged-chr2-122418564-8	46.0206344730073	-0.549758264099235	0.24429615102533	-2.25037628219625	0.024425069287415	0.218701093128997	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05812275409249	5.50629399957153
Merged-chr4-139209037-8	41.7249202953647	-0.696830106005889	0.288175731873965	-2.41807351880224	0.0156029239901628	0.154366187897226	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.3463473897577	5.54709619623091
Merged-chr12-102690393-4	9.18826638157756	0	1.28991078427764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44607456-4	8.71229852253689	0	1.29619732615437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153407994-4	7.63987051668525	0	1.31344552773252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80680250-4	13.3992950209165	0	1.30485193796046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113650299-4	14.5182931790719	0	1.28018303546743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21652845-4	11.568591863385	0	1.28365235930372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55623600-9	78.9927519981274	0.819469880066996	0.211396882012463	3.87645206620731	0.0001059906786727	0.00331708184317349	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37481382532189	6.23548276750244
Merged-chr5-30516551-3	9.81566389618127	0	1.28651903586911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34126060-3	8.61761133619894	0	1.32616474075815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32055322-8	45.0701687509457	0.192007806412301	0.297926767553045	0.644479876680145	0.519264302619429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8774870921627	6.06408207155106
Merged-chr2-128387509-4	12.123334691288	0	1.29010675059317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94724963-4	14.1832714966619	0	1.28926932025043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118098447-4	12.3255277089377	0	1.29068477174704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69699496-4	10.3906286615366	0	1.32015550047617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83999489-2	5.65996510870687	0	1.31684456637054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147564380-7	25.765890296547	0.611528786580789	0.342662836253827	1.78463703057603	0.0743202108503545	0.497722927796625	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40370674725109	4.9209350508171
Merged-chr11-110420725-4	8.57861467553617	0	1.30070282966598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36695757-4	8.94442417058837	0	1.29102572432022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62810561-2	4.4352535621572	0	1.31658737781696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113398406-8	58.048054863616	-1.60510594869846	0.257996093551411	-6.22143508687898	4.92627970977766e-10	1.41189769261022e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.99357810372372	4.36979581615267
Merged-chr18-83423220-4	8.99310451075482	0	1.29625088186947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111446462-3	6.56484185643278	0	1.33949106167541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171887329-8	30.4568701560883	0.361905624151131	0.340470956440032	1.06295593590484	0.287801934555837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97024551796784	5.26236173465599
Merged-chr10-120848002-2	4.18854711891729	0	1.32390103162068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125252911-4	6.93932730115768	0	1.28956469688352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142076155-4	10.6889271648334	0	1.30292047292533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117352929-4	11.0928663458264	0	1.30137890011531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167005076-4	10.2794082349326	0	1.3008177936077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39527973-4	11.0239012670939	0	1.29291273791882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77686060-1	3.11952612513392	-0.281099401557083	0.97280667895657	-0.288957104877805	0.772614203279555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58380959746719	1.31470332505763
Merged-chr16-11442705-1	3.14857597690905	0	1.37658159788744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9974551-1	5.02308600960775	-0.0894841634758435	0.899508240416666	-0.0994812047907344	0.920756210271441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35475329509534	1.4217268527323
Merged-chr13-51115983-4	13.0089384571732	0	1.28565054355323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128171304-4	11.0269228137268	0	1.2952668334779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169993769-3	7.31907405703931	-2.39101252125023	1.06629966652601	-2.24234574605104	0.0249390353252987	0.222419298808103	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36968290576945	0.469435083901436
Merged-chr7-19335827-4	12.7070517845257	0	1.29312421859038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62079569-4	11.6149464637441	0	1.30421266437705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16329261-1	1.82933411210527	0	1.4222923562232	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83525611-1	1.82533938978368	0	2.34064373078602	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81670303-4	8.34518639680009	0	1.29238445586107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7896258-1	2.50617956762384	0	1.61480075574707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110464181-4	14.2140339345992	0	1.28315223216851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147072098-6	48.6418890576126	-0.300064074251244	0.235858756604612	-1.27221935098329	0.203295194002832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52401757550849	6.18449085456396
Merged-chr19-28329930-1	1.66955761439984	0	1.68781595891034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80935367-3	6.87124734174195	0	1.31738025778663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7330590-1	2.05167078914398	0	1.45339931433866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32489568-4	9.45181920411834	0	1.29823643689115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148708196-4	16.2399308305056	0	1.28037999397853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68062138-4	18.377303120483	0	1.286503259576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105582512-5	30.5805582501225	0	1.27503979141328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12225904-10	96.6924133777699	0.113313252859032	0.202830066203957	0.558661025851506	0.576393082908399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67969125118399	5.79250508739479
Merged-chr16-45024109-4	8.16822640492351	0	1.28840641476209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146159570-4	8.08596867276899	0	1.29100043301368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102718512-2	9.12425990648197	-0.719182677599484	0.583233441547591	-1.23309574926149	0.217540043197516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99540538473037	3.1558945316968
Merged-chr11-87471625-2	5.9716971675555	0	1.34166554329263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142249717-2	6.51781814117756	-3.40568072415359	1.10429264108919	-3.08403823174488	0.00204211350930928	0.0328994110871599	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09567746645601	0
Merged-chr5-65357152-4	7.76378553450364	0	1.30827934012415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-56689907-4	8.72435942105938	0	1.30158740981695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87470940-4	18.0139029319115	0	1.29258019892751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56530427-1	3.31927244573848	0	1.36341103184415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86128471-8	52.9322733641378	1.14225464525322	0.279941540353405	4.08033278594954	4.49712704402527e-05	0.00167829391101585	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67105460970325	5.83371358271079
Merged-chr3-109011081-6	27.0413571978964	-0.707591459489033	0.400388062652977	-1.76726412570975	0.0771840048178916	0.511787516877722	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4640746421343	3.11770517651893
Merged-chr13-51312161-2	5.284001673088	0	1.32431786750792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3505763-4	7.03435409509146	0	1.28551089867943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11118674-4	9.51478706064354	0	1.32219296097088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74577253-5	15.8964646792324	-2.83782252486958	0.644906670993319	-4.40036156006669	1.08070657517643e-05	0.000538671638912882	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62506227485148	1.81518459389541
Merged-chr1-171849629-8	80.1597391358764	0.30907897681069	0.286114744368324	1.08026231745961	0.280025384923541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45111115535367	4.78489155445855
Merged-chr12-113031606-4	8.94157317717737	0	1.29525906652987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107713612-4	10.9419993674596	0.862973554791375	1.23218779090562	0.700358793651996	0.483703263128536	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.469435083901436
Merged-chr11-69261457-4	8.46228854062533	0	1.30426181777918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83413247-11	46.8034482623413	-0.911758536082232	0.269067470359047	-3.38858701449703	0.000702537343784209	0.0143462516459134	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51317376352515	4.62675285203522
Merged-chr12-69361534-7	70.4886339268633	1.98452296600694	0.429359391223499	4.62205557063015	3.79956192942501e-06	0.000232913859137154	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70605712738109	4.80516922235278
Merged-chr8-86861736-4	8.48572169009985	0	1.28839196651386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157445586-3	10.8686315822255	0	1.2874688897435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66686856-1	4.2519283121918	0	1.31444477250605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134435619-3	7.71196902557884	0	1.30477435652286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57803323-4	11.6530118594052	0	1.29989246811471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37093159-4	19.8956572133467	-0.513813664543969	0.346886327443876	-1.4812162483605	0.138548957762615	0.784202701945072	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12034116735369	4.61366933981913
Merged-chr4-155539332-3	6.19518513969731	-5.23434343856638	1.08575426961393	-4.82092825702414	1.42891743900676e-06	0.000107822215899926	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98842588950104	0
Merged-chr19-29484764-4	9.61461731531865	0	1.29162376439947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97061687-2	5.66969220319839	0	1.31247149330642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64927628-4	10.1240269619295	0	1.29802815977518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131671317-7	47.4068882267281	-0.344788492506713	0.272539776562581	-1.26509420700116	0.205837559279838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3308653093538	4.99355693975276
Merged-chr5-100656569-13	176.898048520238	0.265066962898159	0.164916179802026	1.60728294347079	0.107992314172812	0.657431131166065	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.23632597007603	7.48909397515756
Merged-chr15-31342750-4	18.0971290114538	0	1.30214301990717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144126198-4	14.5567287062354	0	1.28912641352817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66114524-8	35.523996243694	0.0293781917271616	0.254135806482465	0.115600363969918	0.907969274435109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06659332914112	5.10677679118744
Merged-chr10-54052623-4	13.0122228054768	0	1.31261821883048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7057751-5	15.5483594383231	-1.33886603202965	0.464775013011062	-2.8806755839901	0.00396823854830775	0.0547344095466305	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70233601668662	3.48205125280109
Merged-chr11-46461562-7	40.088937800482	-0.853546809251296	0.265003942067277	-3.22088344268707	0.00127796110942888	0.0230122679153899	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43458968532043	4.65315674800065
Merged-chr19-21713616-7	31.5053299106487	0	1.27951314501982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35132962-8	34.1924277288878	0.217441661161226	0.27464864557886	0.791708477946205	0.428530677814127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6268765567425	5.80421708032041
Merged-chr13-48548528-4	10.0325008226836	0	1.2844347888992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44434839-4	14.1896643126388	0	1.30293674598521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84390488-2	4.4409796026516	0	1.32003664807973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62955125-4	12.8170950243734	0	1.27939245984865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95520910-4	5.60308715841921	0	1.30175799730115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63823349-4	10.7828375515617	0	1.32972242092716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16326416-8	36.789327265664	0.685084249355466	0.359990391945013	1.903062594682	0.0570323780429679	0.408958386436495	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67713056535658	5.32896616240674
Merged-chr18-10229741-4	8.37434278675027	0	1.29349378177483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88383648-4	8.96073769662397	0	1.2848926683425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-4443104-4	8.0974509028211	0	1.28967786097633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46818793-2	2.95342921051542	0	1.39855638680109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22659184-2	4.12735015411207	0	1.39424540068597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6679217-2	3.92143547712569	0	1.33938735662803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28698314-4	10.627909654637	0	1.30117769628978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97442832-4	9.77200595137043	0	1.28314739733856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53566858-4	16.0575000674854	0	1.29932759739276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94680873-4	11.3392774962448	0	1.29864451064801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53409396-4	10.7232410249992	0	1.30352151544617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69633628-4	9.40628379214706	0	1.30142414325952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-53098333-1	4.50127407778935	0	1.35406418460298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31085284-4	13.3690317023722	-2.60650019344077	0.654537253893276	-3.98220296543392	6.8279431334266e-05	0.00234954592942019	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32958657066916	1.35032549026822
Merged-chr11-58224512-8	32.4608749240121	-1.43825286967326	0.292097017926123	-4.92388754902327	8.48416023757737e-07	7.0986675401374e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67693383166191	4.109978146532
Merged-chr18-60787209-8	23.2528759133599	0.107119515730423	0.34762273652937	0.308148761499013	0.757969138913788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58665405558325	4.60569654889876
Merged-chr5-18010537-4	8.27493190302704	0	1.3083074146956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184083321-3	5.97105176127129	0	1.34945705809695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102387426-3	6.86151854803428	0	1.30534731963265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28510615-4	9.03580689461259	0	1.30745560979788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34250475-20	191.547550594114	-0.139906270781348	0.222728171657499	-0.628148068294161	0.529906946507184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.46738486283342	8.34225044466749
Merged-chr8-57531156-4	11.9696015433888	0	1.28223562039691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31248006-4	7.75924326310364	0	1.29171184657001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134262590-2	19.9099161401224	-1.88185685899252	0.396824889853679	-4.74228534325661	2.11320691153135e-06	0.00014612658078405	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29595735277768	3.39726049287154
Merged-chr5-64677208-5	17.1477062025395	3.56127536579243	1.02322209663252	3.48045197373354	0.000500568558606195	0.0109802460660223	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.35032549026822
Merged-chr6-124874488-2	6.95335713258039	0	1.30868000556201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63150127-4	16.1757964130654	-0.873454876021196	0.499305557822355	-1.74933938214234	0.0802323723121875	0.526075115503934	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62200070144507	4.75587926599791
Merged-chr9-66277122-7	13.2102848475944	0	1.29153018205846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36547453-8	40.760912401954	0.245529442776412	0.284136107809612	0.864126156542313	0.387518591608278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14605436841247	5.41768023783142
Merged-chr19-5806128-4	9.14548577057478	0	1.30749902909476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83646583-4	8.882921462114	0	1.30225191758611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56712125-6	21.6277176031168	1.01631644661103	0.693744307113314	1.46497266527483	0.142928375655727	0.800588745741459	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52724347332632	1.69451313952006
Merged-chr19-40647705-9	42.8025244428717	0.707814499527276	0.211507247670621	3.34652598113115	0.000818310106522524	0.0162591383537102	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13051491273049	5.80032296002736
Merged-chr7-38267822-5	29.9924782827993	-0.246063174180803	0.245060247398474	-1.00409257230814	0.315333995282015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85313754038077	5.5862322629064
Merged-chr6-17668038-2	8.54900310317802	0	1.32436811210507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161517499-4	14.9351331725129	0	1.28224267341391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92868692-4	10.9967222851834	0	1.28940923447119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112648262-3	5.88732165327474	0	1.32534232677639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99189260-8	52.8665072527468	-0.735919330953777	0.327503599938095	-2.24705722652478	0.0246363700585063	0.220200825857359	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26556452855846	3.5879387722456
Merged-chr2-59243707-6	23.5410919328123	0	1.29195636559291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16357901-3	6.67238679612262	0	1.31644916221162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27825137-8	31.7541810013969	-0.841375021820588	0.280092541361025	-3.00391798272164	0.00266527163747428	0.0405789469763267	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15330146110294	4.30415975442579
Merged-chr6-112778414-4	11.9513736399941	0	1.30489317844646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22116281-4	10.3189699112679	0	1.30258557668942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150672951-4	14.9303387314502	0	1.29600218583081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29391456-4	7.0876493741724	0	1.30026785125713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51417947-2	5.69451008809076	0	1.31974561922542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12371394-4	14.5168159460863	0	1.31737267376171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42077202-2	6.4951616246098	0	1.33183340523821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75636732-4	8.59531012438118	0	1.299907103216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5784161-4	10.1446682564477	0	1.28707959267589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80775051-4	15.9180672474846	2.5395862369266	0.914221543335176	2.77786741675538	0.00547169396496011	0.0698619214213137	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	2.08628700317133
Merged-chr19-8982880-4	14.2346222653981	0	1.30920224386259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64639784-8	55.6495719536828	-1.61316586926034	0.258752634291614	-6.23439399439042	4.53530315649784e-10	1.30556792979959e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20770359913037	4.58566491241737
Merged-chr13-17836925-2	5.99574242880208	0	1.32985964469559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128779043-4	13.0230062687991	0	1.29712891016113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17163651-4	7.41242210301711	0	1.29972203108088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50772765-7	39.5372735453143	-2.01135938699541	0.366009307784324	-5.49537769728148	3.89875067527378e-08	5.5870123163693e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42890548929011	3.19688204864944
Merged-chr6-54058962-4	10.6622170615088	0	1.28858601387676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61571038-5	14.2326676977178	0	1.29584659964406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125326064-1	6.73739694672774	-1.76665663932347	0.564175349856927	-3.13139636421812	0.00173977177946113	0.0291356039724928	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64972113153883	2.93788918905273
Merged-chr3-83875283-4	12.347441858546	0	1.29797053602105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119353638-3	9.27957869399065	0	1.29505228078979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148573383-4	7.16241474259723	0	1.31315218742896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151312695-3	7.34709232958413	0	1.30657409874838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54140192-2	14.0063353838522	0	1.33385527609364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166688235-2	4.49521747330293	0	1.32497756618726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130954651-6	26.4010964981698	-1.91452784805854	0.44394183790435	-4.31256458525325	1.61371721435577e-05	0.000743652786243245	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15594653040474	3.36503174736749
Merged-chr18-33720405-4	20.5453995067185	0.629942223325414	0.677419094022956	0.929915068653301	0.352415060374119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57236697530187	2.04585323093051
Merged-chr2-45200798-3	6.44254934151526	0	1.32829126265033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-171329063-2	6.98767944411696	0	1.33029131590059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62430616-2	6.61283281372713	0	1.30523521189617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26455052-4	8.47100051654129	0	1.30227775729363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88698498-4	7.1417535930636	0	1.29977723223621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89411495-4	13.6345805324715	0	1.28490282872743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117373654-4	21.6713926732927	0	1.28797079455673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146848106-4	23.1123366170661	-1.2142805869092	0.359049539733577	-3.38193049296268	0.000719783544636178	0.0146344043272544	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01442315161507	4.73195002188249
Merged-chr19-11343312-4	12.1571140446784	0	1.30297660373065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97993080-4	7.90858552596759	0	1.30043143408782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83830142-4	10.4078261754786	0	1.29791399716224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19669628-4	7.18437647661208	0	1.29816572253939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129512339-6	46.9825956877724	1.34955440651265	0.31716768746091	4.25501859069102	2.09031646736617e-05	0.000910625465843398	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53907460626805	6.98271462518108
Merged-chr1-131360919-8	37.9081472494507	0.497018119174217	0.271387615440608	1.83139572661519	0.0670414986923951	0.46056494675707	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73716939461711	5.21011548086415
Merged-chr18-75924984-6	47.1370341183602	-0.894677661745083	0.368545460954513	-2.4275910478667	0.0151994712185837	0.15115273873833	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43388023363292	3.62541520189268
Merged-chr5-127608733-3	6.07472296537069	0	1.3035811510072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107772943-2	2.58044657632868	0	1.37520048878871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22423649-1	5.3924524197265	0	1.33045874492904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24817250-2	4.74685126460265	0	1.32349613644213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184665520-1	2.5503772287377	0	1.34803965138051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116986218-4	9.27532729332494	0	1.29079713163477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80178149-1	1.04864837604207	0	1.98252327223485	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115654254-4	14.0861149853376	0	1.2891484716602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65714106-1	2.04276294899009	0	1.41835468652484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113787957-1	1.94986137707463	0	1.42851688725426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11060881-2	3.50911823236203	0	1.40858832340118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14640489-1	3.00336348717915	-5.14274240586717	1.22848094672015	-4.18626143091392	2.83586701928881e-05	0.00115965310539704	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85374204933857	0
Merged-chr8-126567847-1	4.46924051318063	-1.15016879115485	0.816576988609752	-1.40852461825192	0.158975782506236	0.863837350162686	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52901792507495	1.31734301959449
Merged-chr1-153952153-1	2.13165604956933	0	1.40679782441098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99212033-1	3.91409202889211	0	1.3946321105685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85507051-1	2.69035150826545	1.95632891747408	1.37782077863097	1.41987183515836	0.155644996855864	0.851273936590081	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr16-16086918-3	9.80978258033409	0	1.29484864766566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98496464-1	1.67337815462281	0	1.69551172889473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75638935-8	32.8415611659371	-0.145409957627949	0.240234929038415	-0.605282330134003	0.544991420003226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62735466124163	5.46517082293587
Merged-chr17-10765021-4	13.8222812642372	0	1.30221434204449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128648730-6	24.9021445850234	0.81904270591486	0.378579840005311	2.16346096480829	0.0305057429404751	0.26003011194526	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16406536661435	5.4103094956579
Merged-chr4-33285643-6	23.4796260263001	0.746762713225573	0.350486676795803	2.13064507915844	0.0331183928127948	0.276186996256856	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91484757156824	4.66855396114154
Merged-chr10-67047848-4	12.9550730763892	0	1.29484250906085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107378365-2	8.33483035097569	0	1.30288126476354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93803407-5	40.6602565397363	-1.14438293309882	0.46718661169325	-2.44951996580374	0.0143046778905306	0.144698681336627	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18399943091469	2.63003640177516
Merged-chr4-43287527-7	41.5964111401463	0.577562916101659	0.314111485825243	1.83871950617873	0.06595645284787	0.454778463085402	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25526163797329	5.83445946785696
Merged-chr13-94868809-4	8.97220893328326	0	1.29031966342441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8645478-4	14.141675265454	0	1.28975175433552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123940832-3	7.61375163782684	0	1.29208606971152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34248965-3	10.3340566547138	0.688462421824875	0.649230666735584	1.06042806832671	0.288949898420227	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58216159504762	2.2093650116602
Merged-chr2-73553588-4	7.6571689091064	0	1.30150607684804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102063276-3	11.8298478682957	0	1.30071340677325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116922846-4	19.108791125823	0	1.3009312935461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94405453-2	6.49265259992684	0	1.31670030111654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56055262-4	12.0540117362873	0	1.29342641293084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4770494-5	16.1691426956988	-4.4725909931962	0.924882744183147	-4.83584651278836	1.32580196978143e-06	0.000101675783605862	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66576068712739	0.469435083901436
Merged-chr2-126073892-3	7.87979173544395	0	1.36521307977081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81756879-5	19.7324927550808	-2.21648597308919	0.560788050062884	-3.95244865299936	7.73555314968634e-05	0.00258869169844749	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34466629987462	2.14251121140159
Merged-chr10-8858672-12	61.4098588688858	0.775942934324867	0.218107996517673	3.55760883009163	0.000374246065691737	0.00880010198225701	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39257147387845	6.18908328713407
Merged-chr8-36190409-4	19.1429939327693	-3.14526726577885	0.55378823163051	-5.67954876274327	1.35050545783427e-08	2.30418093074773e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51322663548297	2.10663323369202
Merged-chr11-26602385-4	7.76846336236636	1.30801955957517	1.29302136280712	1.01159934182022	0.31172966073217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr8-84220354-6	44.1911158147049	0.991365748154743	0.482745900014061	2.05359744769633	0.0400146693873892	0.316383739334165	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70022616597616	3.5522191862789
Merged-chr2-145823035-4	19.0244262919015	0	1.29316856816595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102978059-4	23.3583080871731	0	1.28090252820198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78580223-4	12.8376044598682	0	1.29807540812416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29252310-4	9.81319917893245	0	1.30345686256918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97355372-8	39.333513934013	0.182246993793718	0.277003578870771	0.657922885100127	0.510587684438453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70450127804473	4.90298831833875
Merged-chr7-25105979-4	9.26774517639131	0	1.28795744132642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75414451-5	34.9355197615419	-1.07073287487199	0.390663843867344	-2.74080361333765	0.00612891279893258	0.0760972707123405	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71455677350515	3.66915322722295
Merged-chr1-171823379-8	27.5547609060019	0.469910265958072	0.282380601255347	1.66410250516164	0.0960919465302618	0.601573513888339	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65022860404515	5.10521999940254
Merged-chr18-64594046-2	3.28139420582763	0	1.34344670479902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16637178-4	8.97261818739398	0	1.29044450625313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5911653-2	5.58737595072924	0	1.3225096659904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15284619-4	9.68598944597418	0	1.28407579738536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56703239-2	6.21985617469506	0	1.30944577362359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99334176-4	12.8861050460749	0	1.30039340811598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53587852-4	11.2666047451138	0	1.29172461537667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10596515-4	10.3846134010264	0	1.2995219686784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31427439-4	7.49415385062379	0	1.3093619025339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129088750-2	7.27188505779735	0	1.31780694659094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36272645-7	16.7787514059611	0	1.28537369941646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24670101-7	26.5102581356021	0	1.28503093206176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58722453-10	64.2271767420096	-0.206443393344011	0.327539345991863	-0.630285783586868	0.528507622593925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94944214700131	4.68957056472304
Merged-chr9-124112748-4	10.6310358316484	0	1.28302411137588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34865325-2	7.35942158051104	0	1.45583116101921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66174690-2	4.23513055351955	0	1.3201056609142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62800232-2	7.15690233265698	1.17679047489153	0.674614629644472	1.74438920115283	0.0810912467456374	0.530216991178749	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87227720870197	3.23609817005302
Merged-chr6-38981028-2	3.72380226111895	0	1.37165126490415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122639879-2	2.60997268653773	0	1.53726438227549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8496015-2	5.01854401185879	0	1.31288869710107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80997388-4	8.9588792460135	0	1.31037228651616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104219240-4	15.5875932689332	0	1.29041703967901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44540451-4	9.18439381564744	0	1.2939230119015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26777675-2	3.9422990892494	0	1.37385277807456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10025975-7	37.8770702926399	0.689534842106126	0.281696802638598	2.4477908007737	0.0143735083661261	0.145215101684118	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76449852461806	5.43622996715548
Merged-chr11-31734260-6	25.5885348880377	-2.35114811296999	0.538261143781907	-4.36804354193293	1.2536450371594e-05	0.000604580727662125	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91696946827934	1.6353513846003
Merged-chr2-144165529-5	21.7847062215053	0	1.28227012651985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121462135-8	38.547401467333	-0.0182768044187672	0.295905063652009	-0.0617657710658888	0.950749362152807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09927625323171	5.0101019444359
Merged-chr13-63749091-3	14.9697391599123	-3.98517679058642	0.817171691101944	-4.87679251983444	1.07824743647182e-06	8.52801140822293e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87075668237879	0.666688015277142
Merged-chr9-104402430-4	10.3680776831083	-1.81265364190005	0.864280039012069	-2.09729897727598	0.0359671173509049	0.292949637564956	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2245682445196	0.892489746801999
Merged-chr19-58107021-4	9.29201983589246	0	1.29625482375432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44380835-7	29.3123400520732	-0.466684909723515	0.360994231376099	-1.29277664062533	0.196088321742755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62011916575795	4.11007744509119
Merged-chr11-115078580-5	17.9305612785074	0	1.27864064370698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64172279-8	32.1764294135597	-0.336799392584196	0.291770561086516	-1.15432959147763	0.248365069040466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56962881871584	5.28998449968591
Merged-chr10-78303790-3	14.352278620257	0	1.28905795443663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142094489-8	59.8821998792627	0.435272027091134	0.178354596384942	2.44048673773279	0.0146674845024572	0.147251719511072	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28364860285471	6.71796838912779
Merged-chr2-132018366-4	11.7191185764743	0	1.28614538672707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136582062-4	10.9254064913024	0	1.29013322268742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58040255-4	10.9078181732867	0	1.29568008126855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46828584-4	7.42608261880164	0	1.29092142876928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74003827-3	7.65297707952805	0	1.32438522270273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105877668-2	5.42558493783224	0	1.32282101697392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32363711-4	39.9857061301995	0	1.29373174209492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3483808-1	3.68227171939553	0	1.33284686290092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110642724-3	9.39585285786939	0	1.35273164936315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150195923-1	7.66484029574884	-1.17824530166942	0.902803331262323	-1.30509631596282	0.191860053073226	0.988589104882748	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20937192633778	0.666688015277142
Merged-chrX-7864751-4	10.4937886250714	0	1.2859263232212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66876742-3	5.22098293515842	0	1.32417674979052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139587528-6	27.6467930564637	-0.984641299490602	0.396299173810706	-2.48459084590704	0.0129700410078821	0.134744085803031	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52827281970197	3.44906518061842
Merged-chr19-38022877-10	53.459726958279	-0.184942225994095	0.223503365192997	-0.827469536462665	0.407970981772022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91355054337036	5.69286627228751
Merged-chr3-126625738-7	39.2557240833151	-0.110083112648451	0.277165264924919	-0.397174994775307	0.691238420207965	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93932635805035	4.80644188264157
Merged-chr10-99250959-3	8.15837447919304	0	1.30604768903876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13624957-2	4.39732171641615	0	1.33443303225726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64048682-4	7.17128363420408	0	1.29367441543688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43655381-4	11.6962124283711	0	1.29299546828444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96566359-4	10.9486399738839	0	1.29436013053091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145215539-4	13.9832773553063	0	1.32556273327618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107935413-4	13.5935481528186	0	1.28938094856249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136683960-12	90.5870884666576	0.442204151969252	0.203104485621413	2.17722494220793	0.0294637881935663	0.252835286053418	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.14268294022031	6.56922188297917
Merged-chr3-27643228-3	5.77487233900705	0	1.33872127405197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72833847-5	16.2903195524374	1.06934750997424	0.452420324578173	2.36361509835192	0.0180976040631315	0.173377222564051	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55549354444336	3.37066438665154
Merged-chr16-77128888-3	5.29771545024044	0	1.3155286405228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82751039-7	39.5536159354617	-2.74798259025454	0.363006912447171	-7.57005581995483	3.73063890932535e-14	4.43240600306862e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1144592426725	3.35954739666947
Merged-chr19-34471945-4	8.71434884430113	0	1.30710210131866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102944519-2	3.88423476196457	0	1.33949454949895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12132870-4	11.5425522862759	0	1.29090142838799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123797188-4	15.9497946411989	1.06625579115828	0.374996190644597	2.84337766025156	0.00446381426919603	0.0596264119449885	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28174189168165	5.30881536555729
Merged-chr3-148933327-4	12.3976877296847	0	1.28204297421874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9393613-3	4.84793747586643	0	1.31801557198831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44478658-3	10.1075752308871	0	1.2963046033102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128594299-8	25.4434075599652	-0.256429857597801	0.30238837612967	-0.848014929938443	0.396429656083871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91493713958511	4.55082078723012
Merged-chr14-19986922-4	11.190645296331	0	1.29500380543259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84107260-4	7.26783763110327	0	1.31392504337934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183094927-5	19.8726621673477	-0.20383675095236	0.517931419012504	-0.393559346797301	0.693906400321971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70712075891066	3.19644357585011
Merged-chr16-57563621-3	9.56903596472552	0	1.29740187696322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37744040-6	32.0618097116789	0	1.2933221780636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32359345-3	6.50587893972866	0	1.3037435411184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116328065-4	8.95912791858459	0	1.29238364612055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36699744-4	14.366774864504	0	1.31082901154634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111571879-4	17.9999307769701	-0.117695458228797	0.35028741130867	-0.335996825547021	0.736873260307288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97013921417887	4.80881566349719
Merged-chr2-4504678-3	10.4084710725339	0	1.30235879389647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37248751-1	2.99361727322328	0	1.34463710766585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22445054-4	16.1866975986565	0	1.29119867982594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91093853-1	3.60183258340461	0	1.36062426300017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-109289041-2	8.62254050376867	0	1.31298651091383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-5210548-2	3.46202876286166	0	1.35957701437321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118181279-1	2.77061093974563	-1.61196376142416	1.26518515869733	-1.27409316363139	0.202630400949716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892413352127638	0
Merged-chr2-102948309-1	2.90168683695911	0	1.34541362966344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75962202-4	9.68142192287812	0	1.29646858470591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32913247-4	7.62112012181462	0	1.29525301362941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24493614-2	8.84333546669359	0.602870185098155	0.817031522490912	0.73787873356485	0.460588143135748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28251659749223	1.46928333126936
Merged-chr7-6282931-4	9.86569137598687	0	1.2940154379095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123329356-9	63.588060737806	-0.384694994003804	0.271003189253646	-1.41952201766802	0.155746882447527	0.851634265824252	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68164748287577	5.34625473718969
Merged-chr1-180222184-5	24.0949648684412	-1.98952799754013	0.437938182606742	-4.54294253517208	5.54743777190172e-06	0.000314946019672189	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38116563614943	3.22316726191611
Merged-chr17-71259927-6	63.2644755649217	-0.760828974186116	0.171323612737066	-4.4408879898755	8.95884203412382e-06	0.000462786159337435	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.6681462080121	6.91705414396729
Merged-chr3-98028294-1	2.52397616059376	0	1.41517072075083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91413422-4	17.4940043658858	0	1.288300562431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8415694-3	5.6512742838661	0	1.3367660537041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125204647-1	1.89771310599071	0	1.57003231401503	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4_JH584295_random-595-1	1.37309605957417	0	2.43325312662608	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57888247-3	7.07310298698928	0	1.29643425324713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38128695-4	10.3924522662393	0	1.2888090384204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96803231-8	59.0416419694411	-1.07195340098234	0.277879046369412	-3.85762588071244	0.000114493716726606	0.00352358088839174	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88878926356254	5.70529816078861
Merged-chr13-101918373-4	9.36644553237074	0	1.29569245145456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102730575-4	7.46848998731806	0	1.29849812919676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25022760-4	7.66687176225357	0	1.31424652645898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83075748-10	58.0812885644011	0.981016651703012	0.277888063216711	3.53025833620628	0.000415154086269013	0.00955907643457891	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24641223412274	5.17438556347079
Merged-chr17-27038434-4	19.1517020985794	0	1.29287096322326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83681762-4	10.7791582856421	3.60373131176248	1.03066436646032	3.49651295711234	0.000471381600898981	0.0105165251254165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.21171060354126
Merged-chr2-167747637-4	10.8780664702835	0	1.28886629871227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43645372-2	5.26387685947675	0	1.30877180177246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83972330-2	6.95447055542518	0	1.30629211472982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32017783-7	39.0654831215319	-2.72497829650419	0.425585969600636	-6.40288564743164	1.52467389704484e-10	4.98156702381461e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48548983602175	2.34740663758097
Merged-chr3-9946685-8	48.0027802644369	-1.01058489200009	0.260420125559521	-3.88059444264846	0.000104201472054081	0.00326891473492366	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24296267838464	5.2910579552575
Merged-chr1-173962859-3	15.3208723556088	-2.09717648513965	0.554203781389197	-3.78412518204542	0.000154250176019725	0.0044659424023859	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40764566779786	3.28321719566487
Merged-chr15-59525940-3	8.31249392293413	0	1.29358829044547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158174086-4	9.38005085574158	0	1.29962014768341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111107585-4	9.19435539503895	0	1.29130571688394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91636164-8	47.5589482680304	0.947638213586708	0.253487597455522	3.73840070717064	0.00018519460778374	0.00514310532946717	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63037115439513	6.46350477786062
Merged-chr1-74307653-4	7.30584537773274	0	1.30143936096179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139330770-7	37.2920025979652	0.110412534498997	0.353491467248372	0.312348513978183	0.754775674136067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5419820957825	4.55525978848925
Merged-chr3-20198056-4	9.98086009741068	0	1.28556848450755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29428987-4	10.2186003972161	0	1.29820747928818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55238338-4	10.0312986730776	0	1.29730923737173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73804689-4	10.5021255549234	0.226103514197989	0.770520064304306	0.29344273390484	0.769183765380071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57092977642822	1.40264952818025
Merged-chr2-129320269-5	54.4769911644202	-0.968920673180093	0.526122794821203	-1.84162458406572	0.0655300824747897	0.45256063933604	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30965341793195	2.17313435946258
Merged-chr2-165955013-8	29.717335444062	0.88738304115964	0.301349087917219	2.94470126753264	0.00323266616530134	0.0469009332233085	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94996990723239	5.04361592355299
Merged-chr2-173528742-3	13.2398510672648	1.43516404854895	0.498259031372321	2.88035732056112	0.00397224698212247	0.0547732541240293	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96204192761818	3.62036252767134
Merged-chr1-170959988-3	9.73498390568878	0	1.29511014815725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8677664-8	36.9938415840171	-1.00822731022486	0.294875842868962	-3.41915872258446	0.000628150738313854	0.0131350842066743	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55165808805183	4.38549740377108
Merged-chr2-154574362-3	11.8066768522662	0.0303505408272869	0.887082286829598	0.0342138956869026	0.972706585872958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23234530942894	1.03956264035389
Merged-chr15-64185406-4	15.6955935896492	0.44011283438976	1.16835515590956	0.376694391396025	0.706400731372431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	0.61242769162773
Merged-chr5-72208666-2	6.64893632230573	0	1.31252608493934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47230509-4	10.2903308479921	1.09917164895709	0.631464704501733	1.74066997113387	0.0817414448441905	0.5336140314474	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5525830702317	2.3412244690151
Merged-chr10-24638116-4	9.92455898916727	0	1.29459280137996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31763452-4	9.54083860474631	0	1.28257034781954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24038355-8	36.8597957860192	0.808998182156736	0.283517907960341	2.85342886442961	0.00432502097377026	0.05816481180325	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5310666920576	5.35554536551788
Merged-chr2-125788494-6	20.1084331446059	-1.44273613419578	0.436441211458058	-3.30568263564273	0.00094745334839993	0.0182955929386944	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3789987106304	3.1331985207636
Merged-chr3-45254987-1	3.8860701852805	0	1.33722974877383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112840869-3	10.3656924311356	0	1.29213249761174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150927291-4	9.15434635572351	0	1.29879321348033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99523476-2	5.35929072582108	0	1.29592731054758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136029597-5	22.932867613725	-0.303141133707753	0.33171262046527	-0.913866747917394	0.360786868033422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56190303841855	5.28752457138916
Merged-chr7-66125565-4	8.80447245644692	0	1.29591478108719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89785524-5	19.8214399207038	0	1.27870712673637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50382926-5	30.3842600051467	-1.26671888273756	0.344261607770638	-3.67952410069933	0.000233669606584911	0.00615452402736702	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19716062076312	4.92531664340143
Merged-chr8-115506820-4	13.3704862879866	0	1.28150802467149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60016303-8	51.3351649073247	0.343476766664414	0.181510526137854	1.89232423029587	0.0584477944765771	0.416150333137903	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11332828986514	6.46315023311424
Merged-chr7-122813955-3	7.3369800815474	0	1.3043233268293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60789481-8	41.5076411416813	-0.418329909935936	0.270810155505697	-1.5447349422874	0.122410389276486	0.719717886036921	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37957814542722	4.96163476013662
Merged-chr17-47395625-13	63.8192020017411	0.154704228342604	0.235537322482906	0.65681407393018	0.511300473593618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01235086079418	5.07722643139115
Merged-chr2-4391388-4	8.96960284820231	0	1.3311807995462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-6281017-2	5.44108216091934	0	1.33978330426041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75609660-1	3.41662954643792	-1.23860820430274	1.24991425424558	-0.990954539557864	0.321707778956517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	0
Merged-chr9-90034062-8	72.554170324688	-0.956485828105136	0.280126051628493	-3.41448366742284	0.000639030246860564	0.0133197580970938	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37253518466516	4.44053472138501
Merged-chr1-64036030-3	8.75001052356311	0	1.3454669549973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158163269-4	10.9528428128425	0	1.28886889858147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120527701-8	60.9994364165058	-1.5598548226977	0.319326872054571	-4.88482166458928	1.03522509334425e-06	8.23968562115389e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84674960997157	4.29447423760207
Merged-chr2-103583472-8	33.8692907962899	-0.962400303042962	0.372255163793017	-2.5853242524208	0.00972874566369512	0.108672583613645	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98188588260702	3.70792077877654
Merged-chr1-135686906-4	8.630470928516	0	1.28777014654391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60370451-2	4.21393868373957	0	1.4227169455722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148325431-2	5.17670910312626	0	1.30712424043489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41072333-7	21.820006859915	-0.255172732238678	0.372175866718532	-0.68562406931038	0.49295019948202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06484879690685	3.70188643802779
Merged-chr6-13598535-5	14.0289965387951	-1.99837254573615	1.09421267461317	-1.82631091021006	0.0678034427561355	0.464510895713765	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35598347433364	0.423054662900563
Merged-chr7-73533106-3	10.2436260750252	0	1.29307743492571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41238256-3	8.93014768296287	0	1.29746677245749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136555788-3	8.32907814415503	0	1.29304826771413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46963476-4	7.33143215082067	0	1.29600516046156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48322553-4	9.32331252284947	0	1.29311243973271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6396148-4	10.8824562524095	0	1.32161443055093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118980551-4	7.47615573575473	0	1.30310854035851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59823739-4	14.1868323329698	0	1.28381869959271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90490466-4	11.0473938952533	0	1.29035818907732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16213483-2	7.5343505326138	0	1.30778383563846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98427408-5	26.3526190107252	1.45018895165123	0.457566072748458	3.16935419389901	0.00152778090787622	0.0263484748498494	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87516902199354	3.97273412953957
Merged-chr3-126696762-8	31.5988155342185	-0.286853672326016	0.313136152636463	-0.916066924597623	0.359631794363848	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75813759663083	4.40232596016987
Merged-chr2-166294368-2	4.8098813635702	0	1.32976638598583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13391551-4	9.87026720036478	0	1.28907958880255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43770788-3	12.0620198069573	0	1.30370493746467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57031628-2	11.5832823620144	-5.45380644526655	1.06196795392281	-5.13556593221172	2.81296238061699e-07	2.91308779277018e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91573404497591	0.306240821987646
Merged-chr14-105164953-4	11.6363718194317	0	1.3013434452399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120709392-7	29.5206923604269	-0.638304268825689	0.401131249053071	-1.59126039253362	0.111550986517741	0.673697852586719	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0202589332453	3.54097642503113
Merged-chr10-67069171-4	7.73580694672852	0	1.29366018190541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68978833-3	9.51376895260651	0	1.29473299629402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99266225-3	11.1680115998954	0	1.29496636382905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113627285-4	12.8712804537183	0	1.29368822150909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73441373-4	11.2291435973084	0	1.28894179809698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154016919-1	3.15515136414318	0	1.44159133441169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3345285-3	7.57634954282311	0	1.30669345147859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46835643-3	10.0915780550845	0	1.32507811164385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14884548-4	13.5393900423657	0	1.28476962817415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121693362-7	21.3590856612301	0	1.27995543458507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120363986-4	15.8927601544806	0	1.29431694284051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79802587-4	7.81790134450035	0	1.2890005484618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156190472-9	82.3803326613046	0.910924375692348	0.225239606734778	4.04424598718543	5.24917843269583e-05	0.00189196256956945	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4666539943794	6.38266484044058
Merged-chr12-70910413-4	7.82850551965618	0	1.28676018526663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17657920-9	49.1084615069227	-0.360910356432436	0.300414128784649	-1.2013761066849	0.229605340181415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83747732525444	4.44213656632433
Merged-chr2-68873913-4	15.5218953513104	0	1.29184684287902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61310150-4	8.02301536395169	0	1.28974910585022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156995325-2	10.2185775408088	-2.49472699496094	1.07938122015639	-2.31125662404937	0.0208186843734239	0.193268610465373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85779168039975	1.01087566452899
Merged-chr12-91735797-4	10.6318593078064	0	1.28463141194494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120848889-2	4.98489835835354	0	1.32613668794814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40783180-3	12.5610168437694	3.09428357634958	0.793430728472132	3.89987867284656	9.62409040472347e-05	0.0030692816573307	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	3.22182750332539
Merged-chr1-21036064-8	44.9714777238907	0.00840727295506676	0.257767379674995	0.0326157365826003	0.973981020528829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.90394282544628	5.90973285903506
Merged-chr5-24781243-4	7.78636566514552	0	1.29359118395771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60176239-4	10.9274698556687	0	1.29412060315015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128871889-5	21.0561026308391	0.553248323153945	0.472589734551346	1.17067359425226	0.241730003079604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9006769293366	4.01711783372272
Merged-chr19-34621123-4	16.9103173872934	0	1.33131501415276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26966612-6	22.281451657166	0	1.27651736429242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100197148-3	8.73135631975056	0	1.29376717544854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24554638-4	14.3829227241617	0	1.28451370468518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36590109-2	4.57701844789863	0	1.31077437153285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35319821-10	36.650806773249	0.268543759460991	0.259194558201531	1.03607020658277	0.300169390440271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35813142327306	5.5862604868722
Merged-chr17-83668144-4	6.48905263737535	0	1.29148142264375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80240090-2	4.89393779353755	0	1.3226369049525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-130318957-4	12.1767838462262	0	1.2839421954614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13531141-4	12.3859744975032	0	1.29843555511207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3283183-4	8.31878951064386	0	1.28602282564145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43799715-6	20.6769911266718	-2.1357313016551	0.444300301780487	-4.80695442496073	1.53246907984992e-06	0.000113925738898604	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12905159142642	2.54068926719999
Merged-chr10-7260670-6	19.5742917487661	-0.338953563391443	0.383627215595267	-0.883549314574814	0.376939550347124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1769705567657	4.8910446049284
Merged-chr3-121494149-4	14.3780905844015	0	1.29935201344376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64986986-11	62.825314449172	-1.12596760187863	0.240274996098008	-4.68616218984079	2.78375690323461e-06	0.000182585961674521	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5414621840462	5.45638531007242
Merged-chr1-181232821-4	7.63549341341565	0	1.29878999197211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5711564-2	6.22540636958157	0	1.34528434066635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47015110-2	6.59526978277571	0	1.2927483237101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14848994-2	2.94363490869216	0	1.40190409926196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123692381-1	1.25070023310072	0	1.97832652347014	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108915683-2	3.50792275035763	0	1.36481307247035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89081498-1	1.36003872602851	0	1.53846327965439	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20815518-4	10.0268794954931	0	1.28507870349577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167254400-4	12.992475433869	0	1.30550962886184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42144942-1	3.30683171602938	0	1.32633361775568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75245036-3	15.7636426685124	3.40398128814049	0.509840177127097	6.67656540393033	2.44606929824531e-11	1.09480030385711e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04001997939163	5.48706914856655
Merged-chr2-160211588-1	3.00616834528177	0	1.36175389782462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38787974-1	2.34545701373934	0	1.45284748549434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39617464-1	2.5288443022079	0	1.41600305400756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70218097-2	2.49541752863925	0	1.39152543261603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115136994-4	10.8819461194247	0	1.29557992579406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45654883-4	6.99189215031342	0	1.3063384746534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4160539-4	14.9429953550087	0	1.29232278803993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8567342-8	35.0934444469131	-0.697714001853212	0.312116376154051	-2.235429010328	0.0253891973266115	0.225082416022894	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57837721135398	4.8726605045111
Merged-chr18-46472986-4	14.4857364381604	0	1.29189969139183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-119879363-4	14.1215681796022	-2.32212307762688	1.08949656408948	-2.13137255698235	0.0330584618697523	0.275975936490169	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34969735847081	0
Merged-chr11-99182652-4	7.45757826032523	0	1.31101695701366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9472863-4	9.36974311367983	0	1.29689085133671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55028655-4	7.79922683098279	0	1.29800076582349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42897287-4	12.265516395311	0	1.28912640651651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14233102-4	11.4957040225834	0	1.31113615425037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87732169-4	10.4870534488503	0	1.29458514282638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103852727-8	24.5000727854956	0.195600972421657	0.292886463561682	0.66783889580634	0.504236435307857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66166812897977	4.8305282876571
Merged-chr2-35209528-5	18.5980747257264	0	1.28399257270789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31155953-4	6.35442411338934	0	1.30568566595723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184542507-4	10.3154263075514	0	1.3027812265393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93034180-4	9.78758591978768	0	1.29145946646456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21567371-4	9.34271769508165	0	1.29980326263083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136640110-3	6.2849873891428	0	1.32338579965775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114917311-4	13.6503284688466	0	1.29288867135187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67382532-4	12.6416287817807	0	1.28325691272953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71284901-4	8.52702549258082	0	1.30036194984813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32812609-4	10.4760098247552	0	1.3045192226289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60432200-9	78.7296121942587	-3.83983777814312	0.420851068912374	-9.12398247690471	7.24132783877319e-20	4.73191808952473e-16	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.3127594878443	3.5340712553412
Merged-chr13-97295543-4	13.7886616531092	0	1.31931795930856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126585854-7	31.2206689577873	-0.290329853570148	0.329468854272943	-0.881205764383508	0.378206459873444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55203930408489	4.23507849228923
Merged-chr4-53125251-3	14.9888780529094	0	1.2915429258206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93171333-3	9.6984616198551	2.12339981003465	0.896575965773552	2.36834344338309	0.0178679407207243	0.171655168235291	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	1.49705754145624
Merged-chr5-19897269-4	11.7445104578943	0	1.29094642598204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70330851-4	18.6361469105325	0	1.28483991638997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130731424-2	6.34831688266441	0	1.32324380732376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83527394-4	10.0007733214158	0	1.28747661388972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77441793-2	5.22509611214829	0	1.31162717558513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124493574-2	6.14756139434711	0	1.29633459587938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119801122-4	9.21393902760878	0	1.28488608583261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-31956598-4	7.86250798607556	0	1.30136392123016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52035983-4	18.7911754882574	0	1.29847965884192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108098600-4	24.0772652365594	0.351566934785698	0.627800637152535	0.55999773491832	0.57548098269217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68332541768419	2.12114437764854
Merged-chr4-114652607-4	7.05724622285095	0	1.29336257390533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140566965-8	35.7049958364249	-0.517819775091993	0.283204830360663	-1.82842847147962	0.0674852716041219	0.462835071184189	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87498358273195	4.27796176093522
Merged-chr6-86594820-4	10.016093095827	0	1.30682946565674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118764170-7	36.8744340388908	0.751282590614562	0.279427749157458	2.68864703981569	0.00717422316945822	0.0855330755758834	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09173850922	5.76783757881703
Merged-chr2-128422845-4	9.67261805834017	0	1.29985452045176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62977421-4	8.47726726013025	0	1.30451743303444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99478782-4	14.9046764077911	0	1.30682063862132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3323338-4	9.0892465979895	0	1.31344378927239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136031520-7	24.0540266790484	-0.252740816240861	0.455886892583516	-0.554393689207812	0.579309444093151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81085031681725	3.58581958480759
Merged-chr10-122736306-4	8.93486570349623	0	1.3016908095242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98511506-4	14.3809391484984	0	1.28612167010465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93237817-4	11.9978874077842	-2.60283769615079	1.06229813093267	-2.45019511976885	0.0142778820006336	0.144517112331692	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52912539361766	0
Merged-chr2-133444960-4	8.62876283991169	0	1.29858913411413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115631695-3	7.71801140441682	0	1.29776325411245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97774410-1	3.82666453639841	0	1.3530840805005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54402321-3	6.63810359660153	0	1.3105631791462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60362352-3	13.7914827982873	0	1.32418100774128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9631234-3	5.88670107111056	0	1.30921828693596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12668319-1	4.29452046050379	-2.76436649774814	0.84563622982812	-3.26897831507291	0.00107936573328058	0.0201290619882856	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65166666048386	0.666688015277142
Merged-chr10-53927668-3	14.3791356987647	0	1.28154739729333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24686459-6	22.2430051488259	2.3574374742777	0.480078360331811	4.91052642457855	9.08322143392966e-07	7.4660652556172e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16991210454312	4.34382304324862
Merged-chr11-103178309-4	14.3472563965292	0	1.28390088117194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14102122-2	8.85618717627915	-1.30616056932077	1.22885278397966	-1.06291053440165	0.287822525272581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	0
Merged-chr12-79015162-2	5.61325466748031	0	1.3275049725417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97995918-4	7.34258378898408	0	1.31187634848506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117764762-4	11.4883858418108	0	1.29007540215637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50060128-8	30.3227466473732	-0.0185390246796925	0.311616027134515	-0.0594931680830709	0.952559306920406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73548521413722	4.72356102964664
Merged-chr19-29494596-4	7.94683780177121	0	1.2884226694209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103282003-8	49.6541162224921	-0.369001125621843	0.303523093758612	-1.21572668837945	0.224089054020604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65514781334806	4.24804141293641
Merged-chr13-38028129-4	17.1784718754548	1.58892925729785	0.824985534265998	1.92600862839558	0.0541032964773436	0.392391086108303	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05388273930253	1.0995156753045
Merged-chr1-60621963-3	5.88497829085813	0	1.36156508725106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49178041-4	13.2676150788984	0	1.31226819912627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118659865-2	3.33225889330468	0	1.36564481256907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10430105-4	9.46572794788195	0	1.29398056290395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100213846-2	3.39694340964967	0	1.40583537821231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100961332-4	10.0400075665631	0	1.28560159209315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140846937-4	19.0074640400531	0	1.3321093390579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69006074-8	51.2125531360499	0.251527132143403	0.237273191577826	1.06007396145679	0.289110952676016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57809315648415	5.77718284460614
Merged-chr9-85588260-4	13.9556083835522	0	1.29303278340675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59177530-4	10.3359720141465	0	1.29441948509374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52625205-2	3.94791322327763	0	1.31591784265101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174343674-2	6.45351083921391	0	1.30630997147067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8810971-2	5.37556852119583	0	1.38729403248777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59870281-8	59.0875625697255	-0.599637338923418	0.280595847846685	-2.13701429841205	0.0325968286730018	0.273191274396047	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48570168739345	4.89489321994528
Merged-chr17-87530604-8	46.804779178159	-0.723081346415889	0.316141174380111	-2.28721028772575	0.0221835518288815	0.203196856996088	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89550390256408	5.03727341796342
Merged-chr6-50503227-2	8.68913195965506	-6.32094194556862	1.03360932750642	-6.11540722142851	9.63107032920966e-10	2.45840594426771e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00374767669424	0
Merged-chr18-34855447-3	19.7211429439557	0	1.30229459474164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17459726-3	7.72964069220655	-3.738291631395	0.921538695938184	-4.05657586368545	4.97973925882207e-05	0.00181183764814581	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26542825219702	0.581381506691384
Merged-chr15-77945943-7	35.4269921071879	-1.21614848452295	0.3422248280306	-3.5536535777416	0.000379919299494122	0.00889828191567845	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08208075709894	3.88872003537756
Merged-chr4-139188168-7	31.312039616105	0.703675952101184	0.342375155984464	2.05527749254422	0.039852209985825	0.315717745348358	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84059057857172	4.69024726894514
Merged-chr10-30712678-4	14.0402717658835	0	1.30426483194527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17612849-4	11.986391010958	0	1.29014631940755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4554989-4	14.6072573389574	0	1.27810870822751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70645039-4	12.0679014242551	0	1.29379751051702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122559259-6	17.0273741799843	-1.89569452332792	0.529996341813145	-3.57680680746332	0.000347817034003481	0.00835912170062209	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32476053170644	1.99170652413272
Merged-chr19-45176401-6	40.3133211627747	-0.28382148095735	0.329006364001735	-0.862662586538458	0.388323008488386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31800678905858	4.11754644797313
Merged-chr13-21975039-5	14.9866310725068	0	1.28360906967092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64002119-4	8.85167463818046	0	1.28896990263257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141157708-4	7.61957332559311	0	1.29772460291913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19559869-8	41.4834100385234	1.75006535302197	0.332603754283747	5.26171256482264	1.42719762128815e-07	1.67135583800529e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24609189990118	6.09678109834406
Merged-chr5-17821617-2	5.71177824813626	0	1.30740124319327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111563458-4	8.30561800894099	0	1.29678604675223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160250139-3	6.90236301877709	0	1.31823280818944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111074059-4	16.3805550596392	0.25568033264728	0.492563215435564	0.519081256242788	0.603704078631962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62560990937744	3.3121506469761
Merged-chr3-127449405-1	4.8653365353838	-0.82997726845323	0.942085924929645	-0.880999542069597	0.37831806784586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35869553402155	1.40000983364339
Merged-chr5-92511434-3	7.98214652803081	0	1.28807643103736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60759216-1	6.72310228797403	2.92719823161802	0.801792466271404	3.65081782974396	0.000261406607007249	0.00669826516965215	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3171252164538	3.79675306089341
Merged-chr10-95525123-4	8.68418134574207	0	1.32523771221883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35802353-8	40.0047163605404	-0.185460902603359	0.344752496323447	-0.537953762717236	0.59060897027648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55475278859507	4.29541133256113
Merged-chr10-69888632-4	9.46539588172749	0	1.29985676389043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72844324-8	97.7242637152754	-0.103193650975784	0.253305629487534	-0.407387909951137	0.683723105239622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17783494707743	5.05482046265187
Merged-chr16-22446198-4	11.6456981510235	0	1.28982102001552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155107454-2	5.77943148040462	0	1.32338489441063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3895420-4	13.1699564793052	0	1.29611520294489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29039797-4	10.1618667881514	0	1.29695508579074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43474125-4	7.36232551964236	0	1.30743832181963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165641607-3	7.91591828099464	0	1.28759681564024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5953547-8	38.2542973924387	-1.23326227085926	0.372917205000679	-3.30706723723571	0.000942782598909217	0.0182107808774229	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77837880178127	4.56464841047007
Merged-chr17-74819784-4	8.56643169808233	0	1.30924253745661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34270371-6	25.2163707850095	0.550691649382105	0.645752138564721	0.852791057891187	0.393775183659509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73875713664451	1.66840304550736
Merged-chr11-103032956-2	6.23865878689255	0	1.30189120715808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65794546-4	12.1393128218697	0	1.30064438339213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97830164-8	54.1828159516192	-1.06102935034753	0.272017743519967	-3.90058875063656	9.59590393244998e-05	0.0030632825518802	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78730901550061	4.70917531115039
Merged-chr5-148493172-8	49.9570513240099	0.495342553398836	0.262986995180321	1.88352489848099	0.0596292688506817	0.421794133179979	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74842921710979	5.33145467998038
Merged-chr7-132713606-4	8.52843389220156	0	1.29147029985363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85874382-4	9.53748646064471	0	1.29860642654227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-58538515-8	45.6284802620213	1.0106935390691	0.241712334435391	4.18139000407219	2.89732406545747e-05	0.00117814896316978	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14546691419329	6.11203489705467
Merged-chr13-111508804-3	12.9433223636777	0	1.29974078873646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84139737-3	9.52892112120069	0	1.30809568493251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14837796-4	10.7099929375398	0	1.30178750792535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93953335-1	8.10186315506194	-2.87857000460928	1.32262860819718	-2.17640083298436	0.0295253015699507	0.253257313112732	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09899021851712	1.3480509837169
Merged-chr3-98083161-4	8.32498097276111	0	1.28832646354729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52398000-4	18.8191245051189	0	1.29135991723678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67458076-4	9.83233853078744	0	1.29138565916409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67369765-6	17.3217344807116	-1.09204319567111	0.539411802228926	-2.02450741930123	0.0429179693701639	0.332485788555155	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81226258330391	2.2697975943465
Merged-chr3-105892660-4	14.3781259671089	2.47301289935418	1.19569153376643	2.06826997558825	0.0386146434133017	0.308096603208543	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-94601190-4	12.8408872044028	0	1.28079613286817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107899921-7	48.1482469704655	0.515052527193653	0.442226095387055	1.16468144364673	0.244147963001933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89650201185821	3.85514174041861
Merged-chr15-66846123-4	16.5813894767274	0	1.31652509791882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79394518-1	4.34700642539392	0.318325815929178	1.11809284529559	0.28470427770694	0.77587071308966	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44114795483897	2.30219722357347
Merged-chr5-64872484-1	2.52322912192486	0	1.43680449937718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130718601-2	5.57861678151626	0	1.32168075646148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77414380-1	4.86006359476329	0	1.32363212742031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10287644-1	2.64371405852836	0	1.35062866217487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67050605-2	2.74204990728031	0	1.47558600122219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80079783-4	9.70406243832178	0	1.30306383458999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87749185-1	9.88528545460611	2.30046187864283	0.576857505434477	3.98792051238056	6.66549874669882e-05	0.00230091749129309	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68771771520982	3.85383093935221
Merged-chr2-50660170-2	2.06669354593962	0	1.52581137709889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80510489-4	7.37941816610671	0	1.29472751485878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17771651-2	2.56079262096669	0	1.42755344409759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77509196-3	5.7914810960564	0	1.3458718878187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68269942-2	11.5499477532321	-2.03652829937092	0.605844761042388	-3.36146886186977	0.00077529097610859	0.0155500810696108	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57545669985695	2.16523349939429
Merged-chr1-77741422-9	124.543495826488	-0.702004965490753	0.168848364998304	-4.15760594127046	3.21600146812783e-05	0.00127985890338783	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.54998297291415	6.85521578882656
Merged-chr19-44389097-8	24.5892109523174	0.845671641934627	0.327309847738458	2.58370363060501	0.00977457471983291	0.109072636550922	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28928904993491	5.32275280442238
Merged-chr2-156258665-7	30.7171169274446	-1.30021690534187	0.403703913589099	-3.22071910024947	0.00127869410217581	0.0230122679153899	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08028701383745	3.4926091983098
Merged-chr12-112873732-4	8.16445384119521	0	1.28735335797228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72723592-4	13.5672598775587	0	1.29305626687448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116849131-3	12.9351421559281	-2.99691238585288	0.76571320176648	-3.91388365635996	9.08234091810953e-05	0.00292939116305422	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29846021945934	1.15307255889252
Merged-chr4-119126121-7	44.4495120144207	-1.49089586825631	0.315417180776238	-4.72674273667411	2.28150019969038e-06	0.000154637516143073	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45361627269402	3.85671780618854
Merged-chr13-33047653-8	46.2490202763326	-1.21524710869528	0.274514617742751	-4.4268939799559	9.55996901561986e-06	0.000487860723021989	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18274028593399	4.92004727904735
Merged-chr10-83184140-4	12.3795767230096	0	1.28527737740121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142363314-5	22.7024425802377	-4.96943303369716	1.00234939778585	-4.95778522406899	7.13013213903585e-07	6.11906773930922e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79939434426706	0
Merged-chr5-65867742-9	54.4484269615996	1.15131934740327	0.435426535369556	2.6441184766705	0.00819039823203658	0.0947273916585244	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08439913072267	3.07172379387659
Merged-chr2-75823969-4	7.43773959652662	0	1.28894680659824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91581896-4	7.70914389964063	0	1.30054241783914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100674040-8	29.6001631445809	-0.176448927084844	0.376314022757816	-0.468887462103429	0.639150078672731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2749120415918	4.15772047053938
Merged-chr1-56192460-3	10.6550985019435	-1.18892350896687	0.54058278585225	-2.19933660501691	0.0278539967207556	0.242040860334375	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50849003612748	3.11842126918385
Merged-chr3-65891800-8	41.8450655588584	0.25118341690258	0.261493361844764	0.960572823457354	0.336766998640306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70537070762401	5.98439888250874
Merged-chr10-20774019-4	8.6540600549462	0	1.29453099147135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85710389-3	7.29727496430478	0	1.32917621452688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121320647-4	6.36109910809965	0	1.33121339848813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-151746177-4	12.2546008080365	-2.95944290817456	0.884744472584351	-3.34496908415826	0.000822917426785781	0.0163150370663664	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44902003331542	0.581381506691384
Merged-chr15-59481320-6	30.1542439918586	-0.292732549047251	0.43803708981851	-0.668282562941274	0.503953241737244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36074099454617	4.13427165235128
Merged-chr2-164559411-1	7.6589446957806	-0.686656145786035	0.702643735349736	-0.977246520876269	0.328447121942693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31291168986653	3.53626350514546
Merged-chr5-43048770-3	10.1888402437307	0	1.30082557538398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75853645-4	9.3010739255591	0	1.29196553834793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26503054-8	66.2650840082641	0.85521213158135	0.336826259408365	2.53903045767135	0.011116014547941	0.120239617698108	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3509672150972	5.21631554243329
Merged-chr6-54075732-7	38.4290999225684	-0.490749992965972	0.335604178187969	-1.46228809073738	0.14366228064951	0.803333509440605	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44896348138313	3.92707202270963
Merged-chr10-40500086-4	15.1490858101809	0	1.2863507462657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142273449-4	9.07401287918339	0	1.2925577655322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87119181-2	8.0006395418867	-4.47010075873451	0.965291864818936	-4.63082816881813	3.64206035323501e-06	0.000225800830970109	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51553811380471	0.563523181795778
Merged-chr7-48749425-4	7.83034640167373	0	1.28863373131579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32292151-4	11.9767540901454	0	1.30261610853713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153262149-4	14.0981574103673	0	1.29008066126428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50830095-4	11.0194817919504	0	1.2955184949181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3199126-4	11.270948718479	0	1.29641768022778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93072667-4	8.79522461738306	0	1.28843943876181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170996958-4	8.34249669380118	0	1.2928746852361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67275483-8	50.5285416988735	-0.344067566883471	0.291433949606108	-1.18060221655199	0.237760782682932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79296496417593	4.3376246531166
Merged-chr2-128855637-8	32.8259102300938	-0.0612792661204402	0.253736014490153	-0.241507955595395	0.809161451273663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55535429567515	5.49768615001815
Merged-chr4-3391851-5	22.9757512468172	0	1.28330572811121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-98406496-1	5.01366869414564	0	1.36384066033174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61671242-4	8.29306534969162	0	1.29466054949169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24519177-3	7.22394255599753	0	1.31736350900601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59652497-1	3.47547300270341	0	1.36949320975304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67115246-4	9.19070789508759	0	1.28509733910894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125333210-3	9.47243611037513	0	1.30783253480543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163713370-2	7.10895867212929	0	1.29501398170052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101740264-4	13.2836660500592	3.12093902821278	1.11512172903185	2.79874290578338	0.00513019665783767	0.0664890580728005	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.48219169541115
Merged-chr3-103851033-9	38.0679123889209	-1.78394183025911	0.328871550609854	-5.42443342074131	5.81386550943387e-08	7.83325475421578e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.73897510740055	3.79318102580527
Merged-chr8-84192164-10	72.0117784851377	0.105634505620095	0.22616625764019	0.467065718477554	0.640452860145832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13903193661385	6.14878333219012
Merged-chr12-99480589-4	9.78118810555713	0	1.29772969837012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76703606-8	48.7009439466867	-2.03186492441353	0.3175070026646	-6.3994334215044	1.55954564385138e-10	5.07015271856279e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25128908342775	4.00785531952091
Merged-chr17-27178204-2	5.52443726005744	-0.887526081760772	1.24735343081766	-0.711527350495186	0.47675750845221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	0
Merged-chr1-55505159-4	9.92294299312084	0	1.29004444196873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185277186-1	5.25492565604946	0	1.70326582194483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63929290-2	7.56654934979882	2.45849816627479	1.20573177323304	2.03900918998144	0.0414491103684032	0.324103573786487	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr13-47251260-6	21.8897754568374	-0.546976224654333	0.437036758197634	-1.25155656679794	0.210731489376041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29359998603095	3.21634110942005
Merged-chr13-58478111-4	8.20099725113253	0	1.30375287233747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56812233-4	13.8911740216059	0	1.29205045785643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32353309-4	9.12136748596209	0	1.290386224866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89092972-9	99.1356711143905	-0.38761795399554	0.148523094649947	-2.60981603506924	0.00905909250912021	0.102811731087926	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.33577347239643	6.92971005899506
Merged-chr1-162518371-2	6.96672273285383	-2.98442295526924	1.19582950584348	-2.49569268920504	0.0125711457859735	0.131773194181941	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10440499562403	0
Merged-chr10-34150373-2	3.78241680530806	0	1.39924252932002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184444376-4	12.4536631778806	0	1.29155475806987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88611172-3	12.4913595473285	-3.64728186730242	0.653100957752428	-5.58456058593778	2.34291832202575e-08	3.68029665074747e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17940119814124	1.56586581096048
Merged-chr10-53348507-4	9.67045373200009	0	1.29073714771027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90876493-8	62.7426334952737	-0.254173353108431	0.24448216473029	-1.03963965383255	0.298507346703158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28092166592493	5.05511638466263
Merged-chr5-92353819-8	58.2309033017132	-0.558409607406065	0.291576568398289	-1.91513882776508	0.0554748012626507	0.400160764246514	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59937928544184	5.04626231301397
Merged-chr11-109420223-9	69.7029028335854	-0.562461483745565	0.218141484891039	-2.57842511719636	0.00992518090053547	0.110263663911321	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01203812927319	5.3395437941586
Merged-chr1-166137717-4	11.9274265432921	0	1.28860443109379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172334801-9	63.9260859435662	0.377075310861566	0.244428134444086	1.54268374923028	0.122907526702841	0.721739327814868	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9686174769259	6.32674492068235
Merged-chr9-50459685-4	8.03305998304536	0	1.29465660192764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77662984-7	27.1441957708376	0.158258636824256	0.360591988853047	0.438885615089891	0.660744420359352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85453239647215	4.20008569793247
Merged-chr3-87329956-8	37.9993810160645	0.252919361559299	0.263626576298191	0.959384919042529	0.33736486961178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01299269571362	5.26565417806179
Merged-chr15-101165778-3	8.30428615248542	0	1.30108288522215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13905780-3	8.09598907929979	0	1.31932561211982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64185049-2	9.24095212127253	-2.53877702116562	0.597921658702656	-4.2460027734639	2.17617937180952e-05	0.000941129167639081	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6450074216505	1.45063110846411
Merged-chr13-60738651-8	27.0886653656743	1.00639207394801	0.330669687185076	3.04349661595903	0.00233846071186858	0.0365571898750632	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11010372704859	4.96534339225555
Merged-chr10-60817032-4	8.55211180584029	0	1.29979130418682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83946724-4	10.7465052379621	0	1.30370814380916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160363344-1	4.4159217719515	0	1.31413820491834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115682518-4	13.9010256586689	0	1.2863125819629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111557740-4	7.80638783116154	0	1.29572878843608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75154389-4	12.4631722199909	0	1.29454481840922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104794612-4	7.79708582735091	0	1.30941476109579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40504195-2	4.22465742727193	0	1.37297209953961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80413414-4	16.3254448908864	0	1.31191134931832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80161711-2	4.51297189958468	0	1.30870396593248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77185169-2	4.94168951792927	0	1.32607109793925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25054760-4	15.2061666981312	0.889009000151955	0.935327269488178	0.95047907738051	0.341868880118212	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.921230220525656	1.08974267817771
Merged-chr19-37963700-13	95.8089143847568	0.543737842033655	0.158515185159722	3.43019403147894	0.000603149777664068	0.0127099082138782	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.6493537478274	7.21109734664564
Merged-chr6-32570063-3	4.24465475687122	0	1.38251770461246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39243586-3	7.85293208116746	0	1.33521552095355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85770927-4	10.2001368563765	0	1.29586544432793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58145818-5	24.8942604593739	0.541031854061283	0.405431373283997	1.33445976239806	0.182053225431469	0.952096844261289	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18555487635611	3.76175558206833
Merged-chr19-34519844-4	9.78174939328884	0	1.29596023644718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137890792-8	65.9374889183068	-1.79000406190118	0.244321886439551	-7.32641716215653	2.36387196002564e-13	2.05959436133114e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.42702727043772	4.6489218393805
Merged-chr9-7869013-4	11.9044276506991	0	1.28587415592425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26885175-4	9.17782036377263	0	1.29584260150302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-139919098-4	11.5890231685661	0	1.29110961169422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103744787-3	6.64620338167381	0	1.30262932444408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164439073-2	7.2272067519044	0	1.33459946299929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20800748-6	25.7433144924983	-1.58497892228251	0.454607046699608	-3.48648120126879	0.000489419779920636	0.0108155647408501	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63600853280112	2.6025168295641
Merged-chr11-110980430-5	15.8428598776378	0.20642051300639	0.400042170622109	0.515996882742097	0.605856586409245	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94462532995514	4.20912490755604
Merged-chr3-109448418-8	33.6590531230449	1.45080274991742	0.326232439922898	4.44714434364744	8.7019367457605e-06	0.000453644978335212	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52319328773257	5.49849242932256
Merged-chr6-134247457-10	70.7252961267471	-0.495193559934465	0.203539770061716	-2.43290812298902	0.0149781009894151	0.149428853015927	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25521306205614	5.79460377699903
Merged-chr1-135399684-4	6.64257022935087	0	1.31168493163765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24640712-4	7.17220838413465	0	1.29569304127665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112752175-4	9.11376023127984	0	1.28981884341451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66102964-2	6.8936319472003	0	1.30052742213902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90060365-15	121.313938013399	-0.267346875020354	0.156231808441752	-1.71121923049382	0.0870406499777401	0.558225371817196	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.19865480191311	6.94101537480749
Merged-chr13-45144139-3	10.7368708596621	-1.17932254063546	0.582851118380925	-2.02336840994909	0.0430351786024548	0.333077908439656	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48482401376218	2.80630566595322
Merged-chr12-117765043-4	10.4683172074314	0	1.28863752726377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166656378-4	9.48273397371397	0	1.29329203103491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99407745-8	30.3402736455824	-0.658111102649182	0.333931219759396	-1.97079836717083	0.0487469435587654	0.364089355788214	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91746621175881	3.86020965307496
Merged-chr2-132604116-3	5.16964448689867	0	1.31785774193728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129790726-4	14.5696159185054	-1.64544426667868	0.593792276157559	-2.77107724830371	0.00558711702732376	0.0709061466823653	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34060295748325	2.30279743853683
Merged-chr8-22838878-9	64.5631267815791	-0.180818283119917	0.25832645152203	-0.699960387542801	0.483952043080265	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49846342330438	5.26852815874238
Merged-chr17-66770726-3	11.6800003464531	-4.28105979937997	0.870973110282125	-4.91526058478804	8.86644448001962e-07	7.32685552678487e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34380844046463	0.825079211029734
Merged-chr12-35554514-3	6.03137374428166	0	1.33039188491804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117036491-4	11.8414789592752	0	1.29866496899839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91538223-8	44.3190193231313	1.34221351097849	0.322299999199636	4.16448499631272	3.12056145868989e-05	0.00125088198859933	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10544435889965	5.50620617072728
Merged-chr16-33529909-4	19.1475271508246	0	1.30803989304893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58687941-4	8.26110424152727	0	1.29386955115532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-89858994-3	11.4828636963382	-2.22839141733714	0.737855360464447	-3.02009246898263	0.00252697523120523	0.0388444421214625	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36041173864285	2.00098049458557
Merged-chr9-40765867-11	44.7258691812265	1.08433955244161	0.255180398605332	4.24930581803296	2.14434002037089e-05	0.000930438532344993	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02661146344024	6.09108601179366
Merged-chrX-140780419-1	3.07567212303928	0	1.37221730034155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9350041-4	12.8156910574686	0	1.30613410551506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37215760-4	10.0541848418546	0	1.29621460621909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122798218-1	9.51918044773046	0.024795227629255	0.639326562492985	0.0387833528026251	0.96906311738766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66752250529982	3.05071150134285
Merged-chr17-50079042-4	8.19662253876327	0	1.2877436867956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43387023-1	3.30136609755214	3.73480879312268	1.28949222155767	2.89634069185088	0.00377542277542591	0.0526817802013627	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.47711801254374
Merged-chr11-119952661-1	2.23332474066674	0	1.38106439914314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-36898626-1	1.83473901144784	0	1.4840206366525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47030930-1	2.5643696769078	0	1.35378883185726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27178353-1	6.20929770639696	0	1.33705528711823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16412456-3	8.37415232162666	0	1.31748193230388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103404659-1	1.97480453339499	0	1.37381119138913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94923431-4	22.6072183592376	0	1.29732567928331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91282762-1	1.73717062589613	0	1.41026825847297	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113026250-1	1.91776880219484	0	1.49141089920275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67989791-1	4.90907992296834	0.896580926415093	0.980053773019685	0.914828299321372	0.360281775841972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55273441952502	2.13882690918841
Merged-chr2-18923289-1	2.25241133911345	0	1.48854524704688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132039736-2	4.62775204639387	0	1.30117660814483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4308838-2	3.81644770591425	0	1.40410917107734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-66910862-2	2.56493688051408	0	1.53842433015666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52346912-1	4.07298641186792	-2.92271753602152	1.21638674611117	-2.40278640437801	0.0162706879400899	0.159499606080576	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73393783061321	0
Merged-chr9-85497059-6	19.7966700397045	-1.4135390408595	0.515987107452786	-2.73948519341414	0.00615354864929781	0.0763381661261642	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06557203763883	2.30923017122179
Merged-chr9-96376060-8	34.6211977460245	0.435764440640407	0.263989212214878	1.65069033307963	0.0988018227406772	0.615061818501695	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85529192236951	5.21176552971199
Merged-chr5-136456582-4	13.656045509622	-4.96013379001677	0.938533839482774	-5.28498129886323	1.25717599617965e-07	1.50736555314413e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01210302128833	0.469435083901436
Merged-chr2-154737132-4	15.4511558728536	0.483405341376214	0.449825188970245	1.07465156071594	0.282530758192466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83608654832275	5.00481055121196
Merged-chr11-115712520-4	11.1853170530581	0	1.28737362335572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93475212-2	6.90406620781731	-2.61363055116772	1.088412417207	-2.40132371686332	0.0163358779087048	0.159944220406098	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43993851148917	0
Merged-chr16-45350061-3	19.0156997243487	-1.17554893368925	0.589989740382836	-1.99249046759094	0.0463172700483852	0.350631178009938	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68103623295144	2.86840519849566
Merged-chr14-45075075-4	8.14918195854557	0	1.3114309830896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90898612-12	71.151521134047	0.60845687699519	0.213157432209294	2.8544952464888	0.00431052767739012	0.0580655002281457	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34989354746696	5.98328572726404
Merged-chr18-62478331-4	19.2315654600185	0.56478011891275	0.658590740113401	0.857558548144029	0.391136272387747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38145496441219	1.96617270997603
Merged-chr3-10419109-4	11.957257381614	0	1.29341827914706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112363373-8	48.7807159571775	-0.539675885795618	0.233826315377977	-2.30802031380958	0.0209980066751924	0.194546939429048	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92331698949496	5.3846599811258
Merged-chr7-80014397-2	7.65702999146896	-0.920771075337179	0.629781495990958	-1.46204847427019	0.143727926881168	0.803585099066248	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01531663323504	2.81960882153758
Merged-chr11-20477696-8	73.8229242204055	-2.03490529963697	0.262335279744344	-7.75688768060499	8.70389501119472e-15	1.20995514520715e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61890045615768	4.60030795569887
Merged-chr7-63905500-6	54.394502599873	1.81353136961029	0.635618953122262	2.85317384055641	0.00432849356658511	0.0581995351033067	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18902445379182	3.85038486688018
Merged-chr11-115199133-10	44.6950782043215	0.670162712952441	0.28339899347279	2.36473215638568	0.0180431147731348	0.173032782207994	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37407520726708	5.02390200306634
Merged-chr16-51926851-4	8.38724401298743	0	1.32413643154147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64324202-4	10.0935330278639	0	1.29903433714745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113659865-3	11.2908406962523	0	1.29452996447435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142861159-4	9.47166196207623	0	1.31761432632738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134233364-4	8.61756879528012	0	1.28819007163327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79559375-6	12.6557411486531	0	1.30294448725461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31290471-8	33.8775082152687	0.299345316050033	0.300215415890388	0.997101748297053	0.318715124509789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71354838582617	5.04672654511627
Merged-chr18-81536936-2	4.84732652825008	0	1.31043815678299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155195195-4	6.34917947139693	0	1.29766265666322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44512177-4	12.2019711527448	1.43707036135229	0.68434558720765	2.0999190879801	0.0357359593335409	0.291645060398347	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20284321067562	3.1299791692323
Merged-chr4-11990072-4	10.8575443765383	0	1.28685086566347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130917766-4	8.1375395447186	0	1.28586446401548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29491203-3	6.37973866486816	0	1.30621933748502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-30578258-7	27.5433173633533	-0.709134813722687	0.366088716179529	-1.93705728251654	0.0527383415884078	0.385356107507111	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75434776078545	3.76332956825061
Merged-chr15-50826331-4	13.4560748876128	0.725153211864306	0.501443123889568	1.44613252693441	0.148140034092191	0.821692442728826	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57313734044928	3.6947976263353
Merged-chr1-72415796-3	12.5357967602834	0	1.29898269436842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144998430-3	10.9612407969315	0	1.30116417047884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8877316-3	7.63950550766351	0	1.42098806815006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115493165-3	5.42088837973573	0	1.32802996040829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23453640-4	12.1274978661184	0	1.28249052600496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39606645-4	9.48751514173409	0	1.30600019817573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46836871-2	7.88874425783191	-3.71246183913519	0.869394612324887	-4.27016890432243	1.95324988388969e-05	0.000862995719490571	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23289154631786	0.992113827166316
Merged-chr5-74794915-2	8.21720990726411	0	1.3450814198299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3744196-8	62.5926247831147	1.0888059163194	0.355524879113089	3.06253086713817	0.00219473838830841	0.0348015954191704	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6499253184538	4.77687292728879
Merged-chr12-40789002-4	10.7168911985634	0	1.30179755227333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68392801-7	46.4213418779086	-0.688956778375691	0.289272257443207	-2.38168977718492	0.0172334084509845	0.166809999798257	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02668492445402	4.47650041077257
Merged-chr2-93471392-3	7.89977565766488	0	1.29508314046046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117829844-6	21.7146254813074	0	1.27883077011887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19072321-8	31.3098586824085	0.373942260883067	0.275461364961206	1.35751255329665	0.174618407487597	0.924310607993886	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51413889845876	4.9193784321345
Merged-chr12-69364264-4	11.1238558968961	0	1.30028086974215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123662263-4	11.3872232931036	0.125005035614658	1.30030478041325	0.0961351811495538	0.923413210179202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr4-16214160-6	19.0426235239785	-0.177074320061631	0.638545254783793	-0.27730895928682	0.781542880719848	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23405792877033	2.00962323702219
Merged-chr3-27188400-3	10.6971550309363	0	1.28756012612845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98948535-3	7.20766329545974	0	1.29874275349378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79713859-8	44.720105139033	0.835807730754127	0.281086940313834	2.97348475109141	0.00294439036425718	0.0438477968875911	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5643950789745	5.41018580692303
Merged-chr2-11426881-4	10.7250665386919	0	1.29315331778663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40577380-8	36.5459200507899	-0.622690704706069	0.332833349031495	-1.87087834352544	0.0613619453906294	0.431064038217165	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71267013911718	4.95511334455275
Merged-chr8-69037905-8	31.4331870683491	-0.623661982330694	0.330196460516904	-1.88876034998796	0.0589239479086704	0.418435590093455	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17613245222536	4.47751895032339
Merged-chr2-71043525-2	7.25132529378874	0	1.33286878754738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67270185-4	7.90921522351907	0	1.29691276559804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59151153-2	3.18283698926943	0	1.38053161670623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61561980-2	6.82576563457814	0	1.33639021786667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95832808-4	6.89511497701624	0	1.29843279292623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151595069-4	15.5760420107987	0	1.2955492251393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69185189-2	4.79770273203661	0	1.3225568531639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38824042-4	10.960789887968	0	1.30251616005263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134567034-1	3.22168032828015	0	1.34454416048712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43454748-2	3.97636033643714	0	1.33033055662754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120558977-2	6.64321861548115	0	1.31139116865501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22668408-2	2.8037553508617	0	1.41851170172576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91841627-4	11.0099445626565	0	1.28504974450931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14131225-4	8.67465853935507	0	1.29321826390406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21935547-5	17.0908691837198	-2.38078224310938	0.496526173469974	-4.79487763247459	1.6277416048774e-06	0.000119512812261032	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04600446632495	2.35287325867535
Merged-chr6-83502584-14	64.1075964884842	0.0896526885410963	0.240280857349898	0.37311623376865	0.709061936913063	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66555017094557	5.83544234810035
Merged-chr15-31564046-4	12.8930772090265	0	1.29470869775969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53238505-4	13.5736605360333	0	1.2891561862529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71527351-5	24.9906195927163	-3.45459558665476	0.595513539094522	-5.80103618115462	6.59063762419334e-09	1.2483240759146e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32909668572689	1.46894927517136
Merged-chr2-71580965-6	24.4198419837565	0	1.28714769947559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126004195-4	12.7590203699198	0	1.31701304753585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73095283-4	7.99938902320552	0	1.29051689083341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31121226-4	11.7701595203517	0	1.31522644774515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156066459-6	65.5374856146475	-1.62458437282065	0.312718039462997	-5.19504527340478	2.04670025683588e-07	2.23651630406684e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65340750586659	4.09857076999693
Merged-chr12-88408357-2	5.35684096962475	0	1.3190853094951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168553802-1	3.25946453020158	0	1.32441408559006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8065924-8	42.0498957460938	-0.583986287809329	0.292233863624912	-1.99835255423679	0.0456784515872407	0.347041518128105	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26913633203808	4.66731296299671
Merged-chr18-49945712-6	36.6196092941702	-2.14288483341881	0.604095612927852	-3.5472610420608	0.000389258691387094	0.00909095727211616	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1162073822686	1.88903407179563
Merged-chr17-29164594-7	28.3481604305538	0.861519385875482	0.292911711628967	2.94122546717003	0.00326916483687377	0.0473044387578285	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85624254590168	5.69800594755513
Merged-chr5-147059452-10	108.827149960051	-0.161343599715985	0.16204437591334	-0.995675405620191	0.319407883684155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.37357570191986	7.22039776626973
Merged-chr3-152895128-4	6.4880758445932	0	1.31166900690981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81848497-4	7.39763638842068	0	1.30107248527038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142278273-6	39.3079281403559	1.4576651100598	0.41302768376743	3.52921890553126	0.000416788215711974	0.00958633710211993	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12176965773992	4.3955402233555
Merged-chrX-50620094-2	5.0969972005413	0	1.3441734082058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85959602-2	3.66805068320153	0	1.36965999158964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156667643-2	7.04593529915663	-1.58571569788482	0.643436955971656	-2.46444610177889	0.0137225200378136	0.140506392101374	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96904590778154	2.37475311282297
Merged-chr11-52072011-4	11.6872890274185	0	1.28393633651111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47521761-4	10.1005782557609	0	1.28501887681963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72803087-3	5.05911432702519	0	1.31262818763489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102663600-2	5.25209650568872	0	1.30567101743922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191351205-4	12.2906566357905	0	1.28558189920411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31834852-5	25.8220567850276	0.249829431550122	0.506692321934578	0.493059438114751	0.621970590047263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44053847468362	3.16123167027831
Merged-chr6-145276439-12	111.13148835254	0.631125027758989	0.19173694957658	3.29161921660236	0.000996123864027564	0.0189774664777683	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83465630687271	6.53769312580115
Merged-chrX-48423844-5	33.2932077350083	-1.52629827280061	0.433106245665517	-3.52407356872742	0.000424966239504886	0.00972623210927893	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36352090047107	2.9298561631795
Merged-chr1-37496189-4	11.0044256589338	0	1.29139396536723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46077054-4	17.1024952730676	3.10476224549114	0.870826793838385	3.56530399323858	0.000363434690517024	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	2.43884655774859
Merged-chr9-22314178-4	11.9376771760498	0	1.28599560435992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81926073-2	3.53916016007698	0	1.3278708451268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135634081-4	10.513548323787	0	1.29701616755914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101138834-8	55.7333649102226	-1.31928848206994	0.23989967241836	-5.49933423739423	3.81227898593653e-08	5.48716261266538e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.58947956368272	5.29637235207023
Merged-chr12-21523147-3	16.0805270591225	-1.86180005169499	0.453305085817354	-4.10716779922727	4.00540251338059e-05	0.00153421472824952	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71702663832683	3.6460552043594
Merged-chr13-109441616-4	11.9337824608634	0	1.30485203502435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32268879-4	7.68239792925879	0	1.2866306092841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53566047-3	15.647911585812	0	1.33045596195473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3710518-4	16.7143151311363	0	1.29575417633081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102302489-4	12.4039745930703	0	1.28449884405356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40709508-6	32.6821754080889	-0.505392160379541	0.307366532966881	-1.64426541660603	0.100121389608269	0.621559217684018	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24909879184124	5.62077147399793
Merged-chr6-129209352-4	9.34385631724083	0	1.32748948294121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35749367-3	5.93206367021968	0	1.31220189341878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134714158-4	8.37695625925544	0	1.30517288656958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21169885-8	29.7566291143204	0.475866541554005	0.281804322850243	1.68864173814285	0.0912881069891164	0.578723776968342	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5952091720328	4.89281519443159
Merged-chr7-100508813-8	35.5401439585118	0.292059218872055	0.305676842481922	0.955450915092882	0.339349716513542	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34037881054333	4.65030918838505
Merged-chr15-51593002-2	7.35922116578803	-3.35830259920799	0.789647557603285	-4.25291329894189	2.1100728813138e-05	0.000918008139163327	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27927118366073	0.989878296978726
Merged-chr5-141013561-2	7.35046250908114	0	1.32609208948221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152802393-4	11.0686341542314	0	1.29940551727374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14186460-1	12.07609617567	0	1.29106975686257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99091068-1	5.11323517695312	0	1.30308737597789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102158836-1	2.32734634366285	-0.935790940611332	1.4917089658316	-0.627328092842591	0.530444192181619	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	0
Merged-chr13-41381660-5	15.4078384547805	0	1.28536596824812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142766253-1	1.7112028407504	0	1.3847738387742	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4709293-2	3.13490199355567	0	1.37951115529511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144537687-2	2.22813324525328	0	1.58750904923373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106809900-1	2.82514265234911	0.578426319122977	1.02331861494153	0.565245575207314	0.571906741433935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02478169193138	2.30712077184164
Merged-chr18-20735562-3	7.95942129017981	0	1.30992886771621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95592976-1	4.61497871983776	0.787900490988117	1.18215817652596	0.666493288828352	0.505095851904552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97374687118605	1.93399614274172
Merged-chr11-77410068-4	7.55667399982494	0	1.29265562576989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60913196-3	11.5914707634099	0	1.28549813035248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8566580-9	181.517668164093	-0.121078021840449	0.170477695259211	-0.710227937187617	0.477562799079546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.78598599066885	7.66727124705795
Merged-chr10-53616432-2	5.24144393766662	0	1.29531212126388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90132633-4	10.7699975050318	-0.886492754857211	0.536091627040086	-1.65362171342199	0.0982043980699679	0.612217572627373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72025215099682	3.56173046451715
Merged-chr3-95650309-2	10.1342361337951	0	1.28496301585626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17712541-8	38.4229227955187	-0.531211178221586	0.331905055633799	-1.60049137307414	0.109489619219721	0.664441740112544	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00359775254389	5.43222440032807
Merged-chr1-183635334-4	23.6412511139417	-0.545492932664721	0.695551016807938	-0.784260132589738	0.432887487413863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56620289789595	1.54028618764495
Merged-chr7-114892808-4	11.1619447790899	0	1.29134983852627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140783574-3	7.75707841629014	0	1.34008978298265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53203723-4	12.7056507427342	0	1.28443456328478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94195045-4	10.5658447906387	0	1.29634855682645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58273137-4	10.0311466119603	0	1.29394563550646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71002658-4	12.8578403764068	0	1.29326020740451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57464794-4	15.3764736503483	-0.329912903148115	0.413017788754935	-0.798786183381242	0.424414403400458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0019119240374	4.74217617421507
Merged-chr13-111797173-5	39.04506825418	-0.0448980594893377	0.380638013875758	-0.117954744015643	0.906103516512103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64207267236611	3.66813819010782
Merged-chr9-42837717-4	8.30263924363981	0	1.3134447209626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72783383-6	21.2787222333764	-0.62437204523596	0.371032307770574	-1.68279697524895	0.0924144007926335	0.583977510317709	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33932720349218	3.72726427780117
Merged-chr3-69606632-6	20.8450036808807	-2.81586284798278	0.486673741851831	-5.78593543442102	7.21099092820468e-09	1.35405003791512e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32249654528397	2.22674752688732
Merged-chr4-150076364-8	48.7820133301138	-0.365714242707939	0.318490409942077	-1.14827395517011	0.250855487413084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12226932698506	4.74143360552612
Merged-chr5-66062575-8	46.2827586623799	0.108834885250542	0.304005899796943	0.358002543119186	0.720341410384812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46069617458015	4.57196308659139
Merged-chr3-51720433-2	5.41344515483163	0	1.32001243159304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89224770-4	26.8812952205063	0	1.29552268130369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6454923-4	9.87714127296202	0	1.30716973917975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50876652-4	8.78506545447369	0	1.29176712203637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37337412-4	14.2212021888689	1.66853498407936	0.880457699413984	1.89507682787022	0.0580822240543938	0.414349455574063	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.68348383313306	1.69969229296561
Merged-chr16-92787195-4	14.2003882551924	0	1.2896649494135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92948736-1	6.51755050769933	-0.095716899490468	0.815260512148386	-0.117406519835278	0.906537917725112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26227159890545	1.5268023559189
Merged-chr11-109410733-4	24.0641725670987	0	1.28715164145332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84761858-3	7.87634676125691	0	1.28852554026215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113222318-5	21.6279004149222	-0.187669050583231	0.436969119616821	-0.429478977250838	0.667574689753109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05458575989265	3.33285673048204
Merged-chr9-104663638-6	32.2436453129599	0.493828500753356	0.401032733270242	1.23139200315746	0.21817628642357	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4422741302473	5.94686586906242
Merged-chr2-163939818-5	25.2875706392745	-0.964588634482162	0.39436458010492	-2.44593120970837	0.0144478563727347	0.145785920712279	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94133984119885	3.81621041384363
Merged-chr11-4222497-4	14.2056686365943	0	1.28062720940701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39268837-4	8.33114059971736	0	1.29206862567624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4661528-8	46.2881581586956	-2.02379292779213	0.321159693273406	-6.30151594418561	2.9474845479743e-10	8.95843373357809e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8104223754924	3.4825900204652
Merged-chr13-52603448-4	9.33464248314212	0	1.28703317814895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37984503-4	7.49673850852777	0	1.29704196991371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64186025-4	9.74028773197989	0.0210190228502585	1.1396671458741	0.0184431243160365	0.985285350055167	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	0.729295484888209
Merged-chr3-9878996-7	25.7313619625541	-0.854062133423221	0.354006215646587	-2.41256253612183	0.0158408197059065	0.156158168495357	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69173348733279	3.92982474596279
Merged-chr2-22933829-4	20.5628555853137	0	1.29478394495417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64368394-3	6.84863853050312	0	1.32782129744941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70945476-3	14.844732955869	0.585378500773483	1.0409485182614	0.562351058197563	0.573876857384881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789939949474495	0.73596151290311
Merged-chr12-117861029-1	4.22251326425007	-0.468847516020789	1.12544183562224	-0.416589734965351	0.676978518904226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.859258899646375	0.581381506691384
Merged-chr2-163744849-1	4.02980061859213	0	1.31240842739419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92438139-4	7.51768159221139	0	1.2921466595175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181234527-4	9.76713600881759	0	1.28658275536321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91399133-2	5.94295522614655	0	1.29145491321354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90853331-5	17.5895822867769	-0.293081684614047	0.394489851522095	-0.742938464660684	0.457518936641149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86350501289482	4.26352749619083
Merged-chr14-14870649-4	8.52663261832894	0	1.3100230266303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135476427-4	10.8274685620808	0	1.28448486226826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115003535-3	13.5744609849905	-0.241379981601183	0.478430379869207	-0.50452477885533	0.613892654122789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37184575703822	4.12593329594568
Merged-chrX-20345203-3	5.91766393959893	0	1.30612351507897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67579359-8	40.1217797798269	1.08383963072677	0.28053238100164	3.86350989806212	0.000111769362222711	0.00346275818955942	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9982180139465	5.14975511903622
Merged-chr11-119991437-4	10.5766863356419	0	1.28855848152817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98415716-7	36.0936804622345	-0.766290135199204	0.294700823149814	-2.60023072555062	0.00931611005101325	0.105032872221103	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08540762552639	4.19495710905499
Merged-chr12-113017606-4	8.36476628520142	0	1.29520127035891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120532058-7	42.6507738958913	-1.15445166938525	0.419010096456639	-2.75518819032733	0.0058658385623659	0.0735435699724409	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48996690833489	2.61059527604734
Merged-chr3-15285061-8	63.543322379801	1.16430812797638	0.27746478879048	4.19623741467093	2.71385768829124e-05	0.00112311427801824	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.303724059428	5.53158551308937
Merged-chr6-89312620-2	3.71953930965822	0	1.34577761639207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100587803-4	9.98460991420562	0	1.29768164506625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120832462-4	14.1748329737763	0	1.29958682272431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45625974-2	3.87650233126301	0	1.32562580198925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53476999-2	4.46106883780141	0	1.37491887648022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148990056-1	3.88913320694963	0	1.30928813709574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118222534-4	8.25523352282588	0	1.31246255386642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69994880-2	4.36894568293473	0	1.34485882312048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9113958-4	15.8110333169943	0	1.29966026988447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101697404-2	4.01235745372398	0	1.35090722128012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88544060-4	9.12023891545986	0	1.28974035738121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76241491-4	11.4303900691175	0	1.29160627297065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131244713-2	3.54290334381003	0	1.36877688557697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80597280-2	6.9789045271649	0	1.30930843311705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20208266-8	61.8889819492243	1.59597569129892	0.277407553110572	5.75318037812325	8.75799503303173e-09	1.58093907024445e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31061894548843	5.83165697678663
Merged-chr3-108855544-9	106.480598634352	-0.628322139608949	0.192143397272962	-3.27006885756445	0.00107521308015705	0.0200745354102693	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.72141819283557	6.02018192938274
Merged-chr18-4920520-3	10.7612812235274	0	1.29510290066817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70447592-4	8.12599545024689	0	1.29159518019233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137807821-4	11.4571413022017	0	1.312731342494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113873216-4	11.6615966909969	0	1.30236303245365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139726566-11	70.3547969454834	0.526761118783727	0.308601513209638	1.70692979857779	0.0878351014102981	0.561928313189472	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92514832931768	4.52274525793801
Merged-chr7-75700000-4	9.83397566639332	0	1.28461788557281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50818354-8	26.1275083014151	0.763490851752961	0.401894343903254	1.8997302732301	0.0574685253867319	0.411273492489473	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22623964499307	4.99429884802295
Merged-chr15-97573160-3	6.15642889795634	0	1.32064402924187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47757849-3	6.76886095772696	0	1.33542324418143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5811745-6	16.1305090722313	0	1.27790335711086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123079884-4	13.6603735138093	0	1.28904668540921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155235070-8	32.9905795907448	0.247311041211001	0.269176564138076	0.918768846028294	0.358216490897506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07879586929122	5.28957395791685
Merged-chr1-179845045-4	9.29632838199453	0	1.28467243021761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123659429-2	4.32061822307198	0	1.31927139168402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96342680-4	8.5175166727997	0	1.29938992938707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92749632-3	11.9101765351243	0	1.33035601042113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57029852-1	3.07799749705255	0	1.42888522362842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95955343-3	20.2049312594	-2.40285098852746	0.419611358721013	-5.72637260309496	1.0260074452909e-08	1.81204006810754e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19169960754518	3.43074938566789
Merged-chr5-43186849-4	12.3144991007393	-2.85159817047308	1.04673379226821	-2.7242821350917	0.00644414308528589	0.0791241965522533	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98708299346742	0
Merged-chr2-38291754-3	10.4935374826525	0	1.36909304056339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145855950-3	17.6837418053476	3.13247369642534	1.07648443528419	2.90991081129601	0.0036153190912788	0.0507967334436695	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.4217268527323
Merged-chr3-32397605-3	12.7986414187937	0	1.29066435294587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29435696-8	50.3643094876195	1.24132948707055	0.289499589024209	4.28784542062596	1.8041456964157e-05	0.000811940114862124	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79513665650262	5.06543824702652
Merged-chr14-79290116-2	12.2877953991442	-3.10475715997882	0.698556334480971	-4.44453368572724	8.80827068671e-06	0.000457176533990271	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55910032074398	1.27663763006505
Merged-chr1-136618793-4	8.32482869272767	0	1.28952659824165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17775325-4	11.7398642915175	0.736590988166898	0.655838125867116	1.12312925875271	0.261382601343502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6889961804215	2.30670691456252
Merged-chr8-83662549-7	20.8587863303295	1.16789265648779	0.394413763288907	2.96108494477742	0.00306557376355263	0.0450771789273425	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1785484080242	4.36037239227696
Merged-chr1-162207412-7	38.0221855297082	-3.2623392932173	0.487422122923164	-6.6930472372744	2.18570544529592e-11	9.98790965232917e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52181113801756	2.05270361819948
Merged-chr8-115536975-3	7.3986012501897	0	1.33618541221753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89006541-8	33.3888865074299	-1.43931387093045	0.403559711898727	-3.56654499567995	0.000361718725865452	0.00860461298158129	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42118921476139	3.67192559875271
Merged-chr14-31183797-4	15.204552189746	0	1.28453205121508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12730587-4	13.1871642687462	0	1.28906331203575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62190170-4	14.2193634132206	0	1.30607823225791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105310847-4	11.317166271458	0	1.29872915595072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96880495-3	21.0250675831291	0	1.29111102641851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52049528-4	8.31351210219545	0	1.31094332224794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74974217-2	4.54341247645513	0	1.36538949621521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71224484-4	17.2798777465683	0	1.3117571856347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120511074-4	10.2297728233432	0	1.30952345447748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100163926-4	7.78277058923207	0	1.29571883761241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128666546-4	23.9943925542858	0	1.29902031909437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81052550-4	15.2959150479116	0	1.2965097949715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66087218-4	8.99276662167819	0	1.29310058107632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54771225-7	27.5053486768685	0.727862950841488	0.321912284908859	2.26105987551101	0.0237555495984893	0.214114502629363	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20544970343937	4.81492116834217
Merged-chr3-107119501-4	13.718083444867	-2.4142070860479	0.572201993538693	-4.2191518262941	2.45223101635163e-05	0.0010340951972502	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60212813456975	1.94985701881947
Merged-chr7-127008349-4	13.5826817340189	0	1.30836561940795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74775947-4	13.7581665149117	0	1.31859431689601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45005270-4	19.0970710921808	0	1.31282650423632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-28914451-6	47.8900362336928	-2.68602183961928	0.356838892877768	-7.52726760796043	5.1813111042828e-14	5.71056349282621e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37557153165572	3.58999369726385
Merged-chr17-17587715-9	38.1764010455893	1.20244388154475	0.413225305170209	2.909898949798	0.00361545629796019	0.0507967334436695	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56375339557383	4.15177211895038
Merged-chr5-123391576-4	9.95929530287082	0	1.30198151305353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8624199-8	24.4439336543186	-0.661104452233329	0.348483704354994	-1.89708856962756	0.0578162495498832	0.413218926291881	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67326238389046	3.96544257970652
Merged-chr11-94226227-4	9.31670432377851	0	1.29278059617169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44686216-4	11.441369063193	0	1.2980563118613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85648496-4	16.2629591979059	-2.18648314301483	0.611092932223966	-3.57798794212446	0.000346249420851455	0.00833985059158097	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46351968568043	1.61981563456346
Merged-chr19-41313919-6	21.0127734112959	-0.784837972740155	0.432763935655815	-1.81354754423056	0.0697474125732386	0.47407056605064	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51536160572198	3.73013530661968
Merged-chrX-61677994-3	7.52100790042562	0	1.30664564466374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125731908-4	9.18588425746954	0	1.28716097128833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84130178-4	8.16405304040643	0	1.30573811363615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66213742-6	21.8157978169289	-1.24540917431831	0.502852995036049	-2.47668640062295	0.0132608360360871	0.136959473939331	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50446600101443	3.21915892870393
Merged-chr2-75733371-9	75.5980545334872	-0.0189330837787388	0.23009199926771	-0.0822848418849642	0.934420207965135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67576211387184	5.59974143891974
Merged-chr14-120387526-1	3.43115405202989	0	1.37299429611031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38232404-4	16.0517586234479	0	1.28394011693995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87479219-2	3.49296178842624	0	1.34864366778966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54820887-3	14.6557770227016	0	1.28316106177362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51837506-3	7.01816514651096	0	1.33415152337185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22759793-4	10.4678929370059	0	1.29528825180991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20382164-4	14.3841257865983	0	1.28460886303764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106683843-1	3.38302755643616	0	1.39104603699392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70040442-3	9.3279988770612	0	1.29559962867205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57598515-3	7.37906800428433	0	1.31993219709811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4563276-1	3.59626121222198	0	1.32128888735383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29477326-1	1.51206888547579	0	1.62117298211242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21955850-4	8.87472731301193	0	1.30121628439035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137869740-1	1.80992655511532	0	1.4587500577362	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37336915-2	8.14110463488275	0	1.29622406615239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37038147-1	5.27194751724957	2.02793177810422	0.87065905521144	2.32919162324882	0.0198489164886815	0.18619685570907	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50037338966691	4.09440387543016
Merged-chr2-39011438-4	12.4011335359363	0	1.28973127530047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136896490-3	5.1416901595628	0	1.37537217968336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146776813-8	47.6131448348233	-1.38296147260419	0.3074078093598	-4.49878445015536	6.83431077824856e-06	0.000374543764597033	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66686361016468	4.29295225809028
Merged-chr1-95653689-1	3.1671836739375	0	1.41995299459588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35234835-9	104.246960913683	0.801500431348785	0.169441647748659	4.7302445532027	2.24249535406047e-06	0.000152643855631703	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67771336242702	7.47656977167477
Merged-chr6-21998302-4	14.1856754423159	0	1.30547567064233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72944136-4	7.95589787336108	0	1.33962334140151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34828001-4	8.03547287389664	0	1.28983995802836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41349592-4	8.50669387230504	0	1.30156789177724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21045799-4	14.8685803982175	0	1.29232670779013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44334225-4	11.234614466511	0	1.28861515449422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6347512-2	7.99910876080335	-2.57443189864745	1.18004537367758	-2.1816380590725	0.0291362556734649	0.250617054526555	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01321353704484	0.306240821987646
Merged-chr10-118882705-3	5.19473135907456	0	1.34148850674002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16580311-2	10.0055120268868	2.04184768778484	0.683612114715267	2.98685123307871	0.00281866848055855	0.0423519683905678	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42542033839423	4.51587094645005
Merged-chr3-144585291-2	6.68149281294013	0	1.32587645452207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103929984-2	7.52965029724452	0	1.30817592926524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80768161-4	14.0637069886019	0	1.29308637017231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41951267-3	8.3066031758543	1.59004241713886	0.673481809886606	2.36092852664658	0.0182292435686248	0.174408221117915	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38000175921804	2.1500809081078
Merged-chr5-135907053-4	13.1036442505998	0	1.29126245541208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69635190-4	6.8589846797382	0	1.29627761239016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8000171-3	4.64394164989449	0	1.31650368941169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107405793-2	9.92684766583978	0	1.33283674710853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122638640-9	61.3991323313488	0.0913347008827459	0.292580953138857	0.312168990848147	0.754912097079695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30031120919841	3.92346269346023
Merged-chr3-136253054-7	23.7442374539028	-0.726575957478729	0.404075524213914	-1.79811919787076	0.0721581205730489	0.486855030266555	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39326246413629	3.70227234460807
Merged-chr8-13649226-7	28.2758273132332	0.864340042247101	0.515306612145131	1.67733155732081	0.0934776649164323	0.5894423903917	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45051774369223	3.425811750129
Merged-chr14-10209203-4	10.6567083403978	0	1.29702126050672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19160495-4	10.395088463582	0	1.3230631799272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24173411-4	11.1319888137141	0	1.30515445409442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52884426-4	11.986596849742	0	1.28466165387242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15938217-6	22.3350729227212	-1.05353850591117	0.454932225104889	-2.31581419774838	0.0205684156978931	0.191407532354674	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68404186470702	3.5626380367588
Merged-chr12-52502340-4	10.2584181648339	-1.48824379310688	1.01998832245594	-1.45907924663634	0.144543297543657	0.806465703661872	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68771771520982	0.61242769162773
Merged-chr6-13691888-5	23.7523866399451	-0.25444255411965	0.463251889008818	-0.549253138857264	0.582831741634411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70503682638566	2.92165786284952
Merged-chr1-131364581-3	6.11225391885767	0	1.34423018522575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54527912-6	106.69941564922	-0.634001188923017	0.195988924557095	-3.23488273817392	0.00121692697896145	0.0220883782498252	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.07675188784643	7.41731043583342
Merged-chr3-127572778-8	30.1824149189358	0.874095670069526	0.298453350852048	2.92875140310567	0.00340326491166392	0.0487803792317593	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09389475122498	5.06361864617029
Merged-chr9-44462123-7	33.8648252532714	-0.981238162437868	0.364058385945089	-2.69527691249466	0.0070330155442432	0.0844194404397716	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45348338049893	3.23698862574711
Merged-chr18-4803487-8	46.0503687433515	0.635913738986599	0.320452386828905	1.984425035118	0.0472084774300897	0.355729378015065	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03355260083244	5.74708768781385
Merged-chr19-34673726-4	24.723321865514	-0.108718480433005	0.375800966911322	-0.289298032750031	0.772353317625592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87950103755308	5.58162229624134
Merged-chr5-34519575-4	9.40650981944849	0	1.30525553392163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96917937-11	63.3499644363886	0.181042001758136	0.279312910560105	0.648169113970039	0.516875576114742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.500804144749	4.69019026090785
Merged-chr7-114083945-3	7.06978450774643	0	1.34586118550535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-30873004-3	15.4906263746586	0	1.28393635361166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135307654-3	6.10434572732507	0	1.38074671602211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80812112-4	13.186901923287	0	1.28564016053262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6508055-3	15.7209886363059	-1.77679014096911	0.560016737090587	-3.17274471152404	0.00151005240724914	0.0260771365232829	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19156873368459	2.87118672726048
Merged-chr4-123562514-6	14.0454004502411	0	1.30061449072643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35063125-4	16.6125683372937	0	1.29884680433804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70612058-8	56.4138161522132	0.0519936815941428	0.27497130850399	0.189087661098242	0.850024112057355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66606502648605	4.70030863716736
Merged-chr1-20940144-6	20.8521637330382	-0.324601227902365	0.354519956803917	-0.915607772348625	0.359872653309341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49843890740391	4.97631652381063
Merged-chr6-58937517-4	7.86364560753977	0	1.2961768049035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-26244023-4	10.5426160558323	0	1.31141680886115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86676910-5	17.7409578527362	-2.15010818388519	0.677166173166035	-3.17515592049222	0.00149756008683675	0.025943680125778	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76216953578433	1.40264952818025
Merged-chr13-58448228-5	24.2277518124064	0	1.29335786918359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36349190-7	26.2143740304801	0	1.28451512950219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57565797-4	8.30536764009143	0	1.29538044922308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39458966-6	25.7639608411755	-2.87591891244217	0.645188397731325	-4.45748702635503	8.292605423924e-06	0.000435091737655479	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24123942678923	1.19133112147929
Merged-chr9-114815515-4	7.90041173228701	1.8802810666374	1.18247108362733	1.59012858130068	0.111805824694604	0.674738032923312	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.581381506691384
Merged-chr15-57924267-3	15.0173745079934	0	1.30333737694249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132513578-4	9.50278964847549	0	1.31010503817676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92882106-2	5.88288371128626	1.41175368556978	0.985383303069837	1.43269495349844	0.15194503231815	0.836901557810338	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07331870676871	2.30889993389418
Merged-chr12-3391095-4	8.94484528982344	0	1.29476243334071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103214368-2	6.65817357565888	0	1.30529278514873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123150716-2	3.41488945380212	0	1.3422247534535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-27378279-2	6.28159417358447	0	1.35027396452101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123347054-2	2.79010279604819	0	1.44857276617143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25303205-5	30.7359942475202	3.1287566875495	0.458763067617686	6.81998379642206	9.10507797926245e-12	4.72206687010225e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74960099965757	4.85647294098901
Merged-chr10-25295241-4	16.6008424380796	0.812834732108338	0.576348250735527	1.4103187284268	0.158445590876504	0.862129728320488	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95390405521129	2.2825894645038
Merged-chr10-20772431-9	58.919370708899	0.896095433637762	0.279227683208615	3.20919266793571	0.00133108263870199	0.0236576679723283	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15449434462539	5.93562205166496
Merged-chr13-113613585-2	8.86896981091989	0	1.29862936837817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63098842-4	8.79574154762206	0	1.31072304514832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98113871-3	14.9826262719212	0	1.2841964352329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102990909-3	7.53972807972958	0	1.29447972496168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35624810-4	15.5499867633758	-1.33681221368801	0.537368559433074	-2.48770083441122	0.0128571836756103	0.133961507699976	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78352752932664	2.71030984388805
Merged-chr10-39440364-4	7.32388864950247	0	1.30753777367832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3780844-4	9.75135038217059	0	1.29379598468708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128359224-8	30.7499127810962	-1.37347209497621	0.398914587944503	-3.44302298407621	0.0005752504224648	0.0122523839981698	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47083160577342	3.91728915406861
Merged-chr13-23799581-4	9.94771048904609	0	1.29156002161774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32230790-4	11.058672567648	0	1.29381911144697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12475737-12	80.6351595549715	-0.312542577613195	0.230319007051904	-1.35699863252173	0.174781645021555	0.924575518139602	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24295376225361	5.79726450821557
Merged-chr3-87566368-12	79.5814834377024	0.300914366449807	0.22645835933083	1.32878453830978	0.183919064694519	0.959321136775864	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19513398996721	5.50120880851994
Merged-chr6-146192074-2	3.81712380458922	0	1.38189261265228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24707849-2	5.25792831737905	0	1.34851483841469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54481902-2	5.16531203924362	0	2.11410967706235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70889223-4	8.76394540267369	0	1.29354366504223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79136043-3	21.7125683907389	0	1.28199632353058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102792098-1	3.15965689263394	0	1.34393444509366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88298245-8	79.6680320962879	-1.38283225614516	0.264429493631437	-5.22949326549996	1.69975292909101e-07	1.93505322133068e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55726242633575	5.15528399130747
Merged-chr6-124375578-3	16.2128379407619	0	1.31323608186764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67526045-8	49.874460710286	-0.130384876715464	0.231816644592089	-0.562448295914612	0.573810621616798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0696719189563	5.90778484279312
Merged-chr11-21453889-6	16.8862694412429	-1.46312578906204	0.499695713020115	-2.92803350306738	0.00341113286498149	0.048850293270892	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5249685914926	2.3493545969995
Merged-chr18-5803220-8	56.9957401726423	0.758816023222966	0.290652354468501	2.61073413497912	0.0090348102243963	0.102640596127156	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59015607808049	5.34066689012217
Merged-chr9-75094934-4	10.9777084456086	0	1.28633780624328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129608780-9	36.4326614476867	0.480654357680168	0.230476888199053	2.08547746993636	0.0370259811760956	0.298519403569789	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66276311515492	6.13262605476291
Merged-chr11-117320177-4	11.8240053854057	0	1.31354013500568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122953710-8	65.3045467382914	-1.39576956235384	0.230832262758165	-6.04668318750633	1.4785809797721e-09	3.57849454459953e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67132600781981	5.288265027971
Merged-chr4-109257762-6	18.9067538787068	-0.772668392055621	0.400347564622617	-1.92999398606051	0.0536075829147008	0.390006803957252	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40184188061361	3.61587672272493
Merged-chr11-114929836-4	6.46233935654369	0	1.30916328103704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86516211-4	7.86861779937342	0	1.30213900058146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123481456-8	34.0217975454235	-0.949669216669072	0.319868704617663	-2.96893445016512	0.00298834336080929	0.0442702981762511	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46436001210647	4.56930091327287
Merged-chr10-93425859-8	29.9766216980008	0.40647985027885	0.258500784272092	1.57245112978457	0.115845964440896	0.691709648424232	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11433900527196	5.58427722913253
Merged-chr12-102391502-4	6.61486755911494	0	1.33320963820234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32200835-3	8.2276084982268	0	1.30214970140577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119502185-5	21.1750779274597	-1.64644774141064	0.399587414011312	-4.12036937020251	3.78265484713791e-05	0.00146111335604779	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42568425590983	3.13277591991967
Merged-chr19-40629114-2	11.3604592014077	0.703956771014491	0.598215507654143	1.17676115381061	0.239290851500282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27410908838643	3.47636644740223
Merged-chr13-51401364-4	11.8479853133259	0	1.29456654831847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34142931-8	25.7176186596161	0.599979176404461	0.294905837068949	2.03447711434815	0.0419035137542099	0.326562553343185	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2889694536904	4.89764574223183
Merged-chr15-36728030-4	8.22581901932386	0	1.29743317412284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31124200-4	8.95523541429678	0	1.28808605603628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27772075-2	6.28263743367896	0	1.32547831807337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79864399-4	16.5203731407898	0	1.30198605767061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76402748-4	10.4776030572728	0	1.28670276776206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34709755-3	7.53359012931865	0	1.31763618090839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13841565-2	6.27301698885513	3.07039837742059	0.861177503063911	3.56534903257072	0.000363372280642326	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	2.58209634937421
Merged-chr3-89909245-4	13.1549542751047	0	1.29191476410519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93188002-4	12.2497212610696	0	1.29668209272634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27005841-4	7.93083000318654	0	1.29399210073972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167826129-4	9.36028530198348	0	1.31631514062255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3967746-4	10.2661975817774	0	1.29344418906573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35387102-8	36.2573319857502	0.230674248924386	0.281941128749027	0.81816459325352	0.4132632096592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8039913260785	5.04220220394923
Merged-chr13-112331405-3	13.7352397871868	1.51600488955719	0.547147587917968	2.77074215994622	0.00559286951634925	0.0709653692068656	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67406465129759	5.37386546324117
Merged-chr15-84968923-4	8.87505919416492	0	1.31193107173721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80180680-6	21.7647089557812	-1.853045381186	0.439994047276302	-4.21152375278011	2.53653876288833e-05	0.00106388101411875	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80797141197884	3.04002873292877
Merged-chr16-21716777-3	7.92998938290196	0	1.30847013140541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77313680-1	1.49884389679819	0	1.61752539763827	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27677177-1	1.29507160694149	0	1.60462380703699	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123858749-1	2.21655300229328	0	1.37353158639046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139252647-8	33.4617778333506	1.65014542037079	0.343336871058118	4.80619927386554	1.53826579730988e-06	0.000114097067867209	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9696118300487	5.07548194056893
Merged-chr15-27724846-1	5.15662116485596	0	1.31888047449803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105268887-4	8.18859295959687	0	1.37915242594308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107031750-3	6.99168797397855	0	1.32398676216412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-56802419-1	3.06602225192541	4.57005560504706	2.17817478138328	2.0981124398772	0.0358952139133261	0.292579349928927	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.0697710950776
Merged-chr16-77024183-1	3.32630902821391	0	1.37449412822134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-80723862-1	3.18971390205978	0	1.4105495008569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76948882-4	10.6286116723026	0	1.30475468699223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26858520-3	10.928500749218	0	1.29830527026784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86629632-2	2.55564159167071	0	1.42184555836235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60143263-1	2.71240752074794	0	1.39300023107711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117837614-1	3.21197247707768	-2.31148049399327	1.03324153370644	-2.2371153487235	0.025278802053329	0.224446377048568	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65268985676137	0.666688015277142
Merged-chr9-106426227-1	5.07209658909737	2.77665300588318	0.780752884162902	3.55637880077794	0.000376001822793221	0.00882634101537688	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84364512579647	3.68165962282131
Merged-chr12-79711264-2	2.48969535628256	0	1.56138694154056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83244332-9	54.1690796104224	1.36078556338495	0.300945922566324	4.52169463464006	6.13465158147946e-06	0.000341734295568607	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94974006758477	6.37015015869176
Merged-chr7-18958181-4	10.9305898353232	0	1.29701366108543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84321517-4	19.6448762732539	0	1.29533737277577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89422803-4	7.22475488504756	0	1.28565839537524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172586618-7	46.491218322827	-0.0799782106501396	0.250763794225314	-0.318938429278504	0.749773202521257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37543230226323	5.2770692131339
Merged-chr14-70867984-4	23.1943602910046	-0.12956039814848	0.405781579578293	-0.319286051089665	0.749509609198533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66015128235241	5.37765705156127
Merged-chr5-115521931-11	106.848378800923	0.481193919247221	0.173469057188051	2.77394670293029	0.00553807503687504	0.0704891023294968	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.4190008493093	6.90393813987852
Merged-chr7-122087753-4	8.3800332355901	0	1.32047939939079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90666977-8	52.5783084541226	-1.2044694500259	0.325403018607334	-3.70146981174548	0.000214354162582665	0.0057690226969221	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89079280713089	4.64470579916904
Merged-chr2-131423754-3	8.47917556164134	0	1.33883526432844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62225019-12	42.8832057901121	1.56988122260581	0.312552260330864	5.02277993748613	5.09288873416088e-07	4.72056605989329e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67788935190434	5.22195102155666
Merged-chr17-28192897-3	9.7692482131041	0	1.3072661647271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85345111-4	8.07588747271858	0	1.28749532807347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17144342-9	32.5419305457675	0.0133382421263476	0.319102412350112	0.0417992519333047	0.966658731364083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29465319705837	5.29178788381437
Merged-chr3-154885703-5	32.3452329964059	-1.74540302617332	0.606207300495079	-2.87921809049129	0.00398662540056589	0.0549135799800546	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37906322080487	1.2679693671925
Merged-chr9-106296928-8	50.3728183808371	-0.574655720078496	0.248197815659698	-2.3153133662804	0.02059578879112	0.191634972852703	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92127250451117	5.28074710260363
Merged-chr7-141370761-4	8.746621826922	0	1.29662831381306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171815975-8	44.576348996813	0.00674318888821111	0.242857865063042	0.0277659893224405	0.977848792086997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39159857152198	6.41245797546372
Merged-chr12-35462879-13	82.714537914517	0.444636279475603	0.22265497646914	1.99697436152849	0.0458279682026821	0.347773128576526	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.42552012804347	6.94798559396935
Merged-chr6-29485289-2	4.56748424947614	0	1.32783473124033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102192551-4	8.17514127449306	0	1.29431764834609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16110918-2	3.78832346843151	0	1.31802942864248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94169524-4	11.9254043459278	0	1.29585816829566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117159966-8	38.9338256549166	-1.35368689495734	0.313392894229649	-4.31945624767542	1.56414113849677e-05	0.000723357160907358	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04914111600017	4.57439747975991
Merged-chr2-84113783-7	37.680641288989	1.1035515228695	0.30829779589601	3.57949858078693	0.000344254117888355	0.00830710102936944	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04762239579318	6.38313666883371
Merged-chr3-79099246-1	4.68812450870618	0	1.32529776192957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64834674-4	8.66551550929923	0	1.28593188274418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121907455-4	8.36814346410309	4.0080936661749	1.02783806265823	3.89953808074497	9.63763790119827e-05	0.00307210285995952	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.69486619385668
Merged-chr13-90050037-4	12.6311185859582	-0.242640092348901	0.707439580045077	-0.342983484658069	0.731610884734926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69335383794297	2.06632714266925
Merged-chr7-7295693-8	27.4047811000289	0.878778163805985	0.283321414598479	3.10170046641685	0.00192412543168617	0.0315359670075156	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47154291052693	5.31286580130716
Merged-chr18-67736989-8	34.9792442636262	0.0203584621289332	0.253570053751552	0.0802873282066677	0.936008736304237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85998665653907	5.78072807281487
Merged-chr18-62229942-2	6.17221285816316	-0.906566869959685	1.07550036735498	-0.842925672065774	0.399270014773998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38272089293872	0.469435083901436
Merged-chr13-119329662-4	13.083862819995	0	1.29831345973058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70620307-4	7.21546502656924	0	1.295605860041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108341278-4	9.46434159138206	0.798442710466017	0.606196285502086	1.31713560370087	0.187793174622173	0.974240456403663	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85066559645076	3.77590606991911
Merged-chr4-62429858-2	6.42046822349362	0	1.3363410189179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130079943-4	5.79088422034529	0	1.29998890869645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88597217-4	7.45163004953424	0	1.29236947889584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34427429-4	15.2217852707715	0	1.30481248775767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30904815-2	4.1443950730549	0	1.32758055221438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157039211-10	102.368835785987	0.221112394960409	0.217023939823547	1.01883872876046	0.308279535962307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34049901054858	6.58547235480128
Merged-chr1-123919918-8	53.9606769364881	0.219683464743152	0.293126831030324	0.749448503130802	0.45358692614137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67526598988841	4.8718699716515
Merged-chrX-167206010-4	11.1078224273787	0	1.28704011406533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69079508-4	14.570772307251	0	1.28644121731951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16307162-3	6.62394701191846	0	1.38309975219773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-84064822-1	2.4839128076533	0	1.35175611571525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52726291-1	3.00413562256616	0	1.46319169958693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3184357-3	11.4524427131033	0	1.30529002771756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82753760-4	6.79700689798624	0	1.31980357030299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181409826-4	7.18114052401175	0	1.28959592324202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70651549-2	6.06851349769256	0	1.34137387744053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29497254-2	4.79065827892541	0	1.7033512439437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3745939-2	5.67929084187601	0	1.33546756144002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82218949-2	7.34571448676381	0.01008512883549	0.697966757156973	0.0144492968068705	0.988471530321237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30398377386224	1.77167105195599
Merged-chr6-53759782-8	30.677113465096	0.0196434474844679	0.256197939776233	0.0766729330517833	0.938883737433845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06186169985367	5.08374336814899
Merged-chr7-83855432-4	13.1462024271572	-5.95736176565471	1.01402881554022	-5.87494327020773	4.22988175940329e-09	8.66476029623722e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78179398622269	0
Merged-chr7-105628793-6	28.9807211852087	0.730786469495394	0.837308089781896	0.872780853802273	0.382782537396252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	1.34574950999398
Merged-chr8-84811072-8	29.7735484734047	0.716026995380872	0.339030714036378	2.11198267807689	0.0346879350586245	0.285193483183301	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50477782111638	5.23198467407335
Merged-chr5-64883641-4	9.49916807666293	0	1.2956090828459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26366099-5	18.064524570815	-3.10255014056843	0.562919546603936	-5.51153385823241	3.55719981106228e-08	5.194696569725e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02441254319898	1.87496859647037
Merged-chr5-64360786-6	24.0264726723642	-0.762775107889423	0.409634448051944	-1.86208731105715	0.0625907842873854	0.437392513104854	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66132675993753	3.92632376900248
Merged-chr11-116319200-3	8.28632246551678	0	1.31100179361129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19063583-5	17.2329793889272	0	1.30107227640688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166657370-3	6.22922291067842	0	1.33182278584356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91852963-4	10.4736415337332	0	1.29945659671195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26534929-8	28.1298017109788	-0.526067130390934	0.342865762660984	-1.53432388905828	0.124949991532488	0.73032274015087	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29236751858775	4.6995011632066
Merged-chr11-22928991-4	14.6711286911549	0	1.29653416361704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-27030579-8	48.5949734968004	0.3121466421543	0.272046385138009	1.14740227846052	0.251215399966758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77605127161356	5.05628906169758
Merged-chr10-17793089-2	7.34878834342054	-1.79199479985584	1.10350394513521	-1.62391336048759	0.104394300711763	0.641986634134283	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19505868269713	0.306240821987646
Merged-chr8-90838645-3	13.2731989417487	-1.448628425724	0.415113645594089	-3.48971526496268	0.0004835354456753	0.0107181503504403	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84118477933032	3.39726049287154
Merged-chr16-20412780-4	12.0995272199859	0	1.29731438623529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-16427617-4	8.12581335720945	0	1.3077478365435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81599379-1	4.06067909790927	0	1.37961663838945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35079804-4	10.5910635152751	0	1.34994154800103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43554707-2	3.01911176013367	0	1.56730656273878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8507522-4	12.9217269998347	1.485595401155	0.725143298407328	2.04869217493686	0.0404922248585773	0.318911043221477	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.956714820747348	2.37850366884776
Merged-chr9-110527863-4	8.62365698247309	0	1.28619977024873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59809310-9	47.9530216386786	0.853789906417212	0.276040412324542	3.09298880996239	0.00198151606733625	0.0321859679185072	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30767980091784	4.95105481472525
Merged-chr14-52141864-7	31.2325880810958	-1.03412445379989	0.331758670119886	-3.1170985024331	0.00182640536265095	0.0302607213052203	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.73304795119819	4.81160239573244
Merged-chr12-116442782-7	27.6445678551383	-2.76764678034693	0.594554567636867	-4.65499204109608	3.23993222101941e-06	0.000205950010617446	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68975530006626	1.4944959016211
Merged-chr19-41016272-14	49.5868727346075	0.0171275630271343	0.275020706891471	0.0622773580241478	0.950341959149126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.73698548936691	5.75324391623141
Merged-chr4-80310822-4	11.5570418084376	3.54672263565311	1.06416489837976	3.33286940872902	0.000859552775721044	0.0169010466652172	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.40000983364339
Merged-chr18-23808928-4	13.3943917700576	0	1.28265236678282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30870163-4	8.24870467930032	0	1.29165251305717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17554297-8	35.8661570123265	-0.512864421804826	0.25755441065349	-1.99128572678503	0.046449483735429	0.351387817107588	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72555548008561	5.23049158820618
Merged-chr3-51182648-10	33.2144901114601	0.44551422928496	0.314702447037155	1.41566814455802	0.156872689333276	0.855604937582192	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82859644014121	5.24540861027989
Merged-chr19-47531392-3	6.0623160784507	1.40858817671561	1.19230534422271	1.18139886191141	0.237444309935641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.73596151290311
Merged-chr5-8863635-7	13.5310739798214	0	1.30276712556991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101051459-4	11.5037623925562	0	1.30084345666982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44591279-2	7.40922326438808	0	1.32952511013364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55472701-5	18.7146233800538	0	1.28204150337493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10430810-5	30.6189424436152	0	1.27876343399816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57558436-4	13.607549687554	0	1.30874353647242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143048111-4	9.51162800434865	0	1.30305156730148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75268734-4	8.10029635655879	0	1.29446166214584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94264143-2	6.22930617649708	0	1.34716792541673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89977850-2	9.19947486986288	0.842806431678953	0.926885430774417	0.909288681962326	0.363197763310895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925679556471107	0.793480537552656
Merged-chr1-36988504-3	7.15862948482253	0	1.34236908636663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128439034-6	14.1254073943993	-1.97622908215224	0.771633078218901	-2.5610994887801	0.0104341471370229	0.114627196496104	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01450341522755	0.773587911294612
Merged-chr4-41358869-3	7.4416017303925	0	1.30430785579612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35254904-4	8.57386832831039	1.40596912403461	0.8018024392963	1.75351065939455	0.0795143914546048	0.52283632763057	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	1.45327344926554
Merged-chr12-55499201-4	9.26728999500464	0	1.30332696054544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172525308-4	13.3757507843357	2.29004114282906	1.02945908176484	2.22450914601012	0.0261142078465748	0.230043007002194	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.31734301959449
Merged-chr2-148572963-4	10.4744465239472	0	1.29347215878698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116202955-4	7.52255083458821	0	1.29500104038665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127574278-4	12.0819932142978	0	1.30291267068444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-75674198-7	114.137035872378	1.05992833492489	0.378595498030259	2.79963269621389	0.00511607840251269	0.0663455565172841	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74951448138671	3.78988974151602
Merged-chr3-8098916-3	7.11999069761024	0	1.30516991541439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120307748-3	8.21185388283719	0	1.29687723817564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91032629-6	28.1517418364653	-0.172444450464537	0.413079813535162	-0.417460366772094	0.676341707949301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92291380678204	4.20708779896673
Merged-chr11-54113059-4	9.67917848655241	0	1.29334527279502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103360448-4	13.9366418941561	0	1.28861006705017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46963250-4	7.25274035835288	0	1.29665009994553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54209591-8	25.6553875888456	-0.992128069670625	0.327932338320656	-3.02540479768271	0.00248300560274815	0.0383489681203452	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19614812047399	4.04018742871657
Merged-chr16-22015782-3	7.45304462250727	0	1.32745020240924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6450905-3	10.9665189960028	0	1.29126648736062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8768807-3	6.76407345030813	0	1.29409752392295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120430292-4	14.9485492168798	-1.20398358194484	1.18152936024776	-1.01900437048164	0.308200891655928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	0
Merged-chr16-29903609-3	5.97076803353487	0	1.31235898151755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58544237-3	8.01660947945568	0	1.29685989617953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103324175-4	7.08005941093079	0	1.29027324187821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-46611-1	3.92551456709822	0	1.68994301388198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21549712-7	26.8986865614484	0.0747891986271157	0.301567717915982	0.248001341602328	0.804133368776106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49427904598819	4.42120574962847
Merged-chr18-9734983-5	28.2653201241092	2.21304004646459	0.68446248919914	3.23325248846577	0.00122389339927744	0.022178740451798	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.796855916231748	2.46801699129062
Merged-chr2-22965613-2	6.22009121234061	0	1.30764897382174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-19969678-4	17.5618023275657	0	1.28995458173773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136451085-4	7.40116280922915	0	1.30998936866154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17772478-11	122.567382223937	-1.10236083688414	0.192350891085423	-5.73098897885831	9.98467547779068e-09	1.77298533633617e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.10429869107763	5.89733210927879
Merged-chr17-14990259-1	3.11796988403236	0	1.32428189949647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52079401-4	7.67192509027879	0	1.29196855855893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69040337-8	27.3541599941476	0.665542586617387	0.345898460749795	1.92409814479864	0.0543422825960083	0.393658925607021	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10527003252156	4.49955403660158
Merged-chr12-73723239-2	5.01752617507135	0	1.31460420950597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42150095-4	14.9480051579158	0	1.30199935021651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117374993-11	35.9290382284323	-0.611435815515547	0.29768889306127	-2.05394231953996	0.0399812747217387	0.316182546044625	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17583250703814	4.55040604528407
Merged-chr11-103051513-7	47.1196843486429	-0.428282783440266	0.295077524143586	-1.45142462030372	0.146661658160726	0.815707950818861	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8786650223634	4.48701976827443
Merged-chr12-113130309-4	10.3601179792186	0	1.31127546959581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62069005-4	8.13866620812389	0	1.29150775888799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118736287-3	9.92991056071847	0	1.29992333183638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117363383-7	33.5388738148631	-0.438762403193516	0.292254057309728	-1.50130474571485	0.133276758090559	0.763286856633273	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64607586834138	5.21142246017982
Merged-chr16-93085741-4	12.8493248837477	-3.06563748097207	0.715348473927959	-4.28551621021673	1.82315352953099e-05	0.000818240319647887	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37066579912795	1.20275690226768
Merged-chr10-8792552-4	8.48336456512769	0	1.28775240365078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44858294-4	8.07221937386567	0	1.31732198186383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10439557-4	13.41623337447	0	1.2888670769715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50182023-2	3.32568100745472	0	1.39107193449037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60580941-4	16.2877206792427	1.9995777833436	0.535294942786227	3.73546922176349	0.000187365495921056	0.00519015926089755	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91006965689731	3.83980136857451
Merged-chr2-36235100-3	6.95167882020259	0	1.30460252004315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133814250-4	24.7646232978501	0	1.28393268631001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157041414-1	8.32569385471515	1.99719130543023	0.643788745424909	3.10224638070064	0.00192058038557166	0.0315015677398509	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81623290794404	4.96005032236282
Merged-chr7-64007216-2	3.07842917872491	0	1.4700834597837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40921865-2	7.60769911559259	0	1.30262319260584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40562832-2	2.09838213032529	0	1.59043220503069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21845512-3	4.55656379784171	0	1.34759856778126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157017696-5	14.1809508843305	-0.0187866443648193	0.602324004831429	-0.0311902634032942	0.975117804816687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79193854512862	2.4627422823031
Merged-chr9-97572609-1	2.52598594456685	0	1.3844969327275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22357655-1	2.84593249755675	0	1.37069080673023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80037400-8	30.9379204532067	-0.292003090881745	0.281077861683132	-1.03886904907128	0.298865642701809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03733686136858	4.74933894093497
Merged-chr18-76152809-5	33.7276155960932	-0.635914514024153	0.475885322514601	-1.33627679598091	0.181458817946757	0.95012883954718	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60829986866854	2.75046767748772
Merged-chr13-32312889-6	25.0230611972635	-1.72813189666964	0.391272813868907	-4.41669299633129	1.00222417109918e-05	0.000507291562235838	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25231553971253	3.53591887812794
Merged-chr4-132334929-4	18.1845945552808	0	1.29249713026016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78804019-5	13.2058932533603	0	1.29923339821066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34711630-4	8.57811202001475	0	1.31099186904849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81433310-4	8.9309966457856	0	1.30658402384252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30416269-12	68.6136170212833	0.634382527370869	0.272368217387887	2.32913565853914	0.0198518801585553	0.186197927492602	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23884806648467	4.89189028237948
Merged-chr12-117560495-8	86.6929309179782	0.725312168623544	0.317805674722128	2.28225052701692	0.0224745535640368	0.205401703104272	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88465380530532	4.56917690628499
Merged-chr2-166665774-3	6.60946320285087	0	1.32326436176279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82377149-3	6.82776305137395	-2.93685220508026	1.08636284984777	-2.70338055603779	0.00686381120374217	0.0829368725813122	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29186917177811	1.0023426291647
Merged-chr9-40732551-5	21.4535913508732	-0.115722033058711	0.424279108106572	-0.272749779208179	0.785045566604624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33477973092794	5.06224920250368
Merged-chr11-77372448-4	12.9978807418753	0	1.28280098456442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25157392-8	32.9039577643351	0.644378560655258	0.293472504037049	2.19570335139101	0.028113183139846	0.243624643123772	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98950176625291	5.64860961108011
Merged-chr3-136432091-3	12.4231741184487	-4.36650393041667	0.887295394730796	-4.92113895366431	8.60420122650432e-07	7.17805853540683e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03180496757387	0.733321818366247
Merged-chrUn_JH584304-12755-1	2.64418549676696	0	2.43325250862124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7842653-1	5.06384789094647	1.97474865487783	0.84014925680115	2.35047360798324	0.0187495372580073	0.178289764502582	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41660385875228	2.62798987719808
Merged-chr10-17589370-4	11.2737857716576	0	1.3145281294056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97821096-4	11.7934535288019	0	1.29286178415375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27439294-4	10.0915411272516	0	1.29375377984688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4349150-4	9.55567336662339	0	1.29486986184644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169928742-11	53.5201365951424	1.81346325433414	0.304270148432289	5.96004328284507	2.52171132505109e-09	5.43840753289732e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38907548609853	5.20806441099268
Merged-chr10-98897737-4	7.17717743537582	0	1.30138886515236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92675824-8	41.1413760534057	0.647382007092375	0.288352469776965	2.24510651007467	0.0247612957888568	0.221135934757228	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24517956219458	4.94079800388525
Merged-chr17-37246897-8	28.2398217396422	0.417697216740938	0.282147843090461	1.48041966993531	0.138761283873486	0.784792700017033	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54500079181916	5.01702561803795
Merged-chr10-86887026-4	7.24930294167595	0	1.29829996976389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152604393-3	5.74647708569078	0	1.31867817633735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193833467-4	12.1924276021611	0	1.30583523240005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173062191-3	9.20058587207707	0	1.30433031892863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32495467-4	15.2923760401805	0	1.2944318733452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152810014-4	11.3919789348605	0	1.29072282011735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40595367-4	9.46238412928837	0	1.29174593677138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80223353-4	9.34230610660057	0	1.29392299186571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23888099-4	19.1712607146825	0	1.28550558819393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27919738-4	7.21224601425356	0	1.29167121174339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54814800-4	12.1586976281248	0	1.29266656526221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153544111-9	56.5830597272834	0.608816576030626	0.239892785474213	2.53786946875928	0.0111529574035785	0.120443092793627	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19487969099484	5.84025076423389
Merged-chr9-85567500-3	17.7577772321232	-4.06755052937309	0.997909574281949	-4.07607125355012	4.5802988897271e-05	0.00170155890419617	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35681295656103	0.423054662900563
Merged-chrX-166945594-4	7.44360371092909	0	1.31008861417953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62970514-4	11.6076410622965	0	1.31089581491491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20662571-4	9.47826016326803	0	1.30293593182897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20886549-3	13.4431495493981	0	1.29065717253281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46875781-6	23.3952965979458	-0.804578215608265	0.462687577628739	-1.73892331350607	0.0820482528121686	0.534669629444445	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38321051839518	3.67093622417774
Merged-chr3-57696442-4	10.1181423845007	0	1.28814124441385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73038706-4	7.39602729767466	0	1.30959910513978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109254133-7	28.3836071237342	0.531618618204885	0.452261687052887	1.17546684458088	0.239807994288784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89914302741077	3.37364205008586
Merged-chr16-24137491-4	8.35500349188281	0	1.29521124267828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70949507-10	69.0474783176464	-1.96497336834782	0.296788851150628	-6.62077891649152	3.57311033458278e-11	1.53610834160294e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71918961743763	4.7159044459322
Merged-chr18-61323256-4	9.41295266658168	1.24316213208189	1.07824634604494	1.15294815200799	0.248931666259326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.666688015277142
Merged-chr1-182928625-2	8.50093465818785	0	1.3223617989498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46601507-2	4.60524249218427	0	1.30530153953319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83535948-3	11.0004245056843	-1.03738719654776	0.470044265294692	-2.20699894274292	0.0273141332057289	0.23845949879246	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75070016749208	3.10858244405268
Merged-chr12-33170324-8	55.4923869188433	-2.40577282679359	0.336434288503078	-7.15079559071632	8.62763840202954e-13	6.06216837654862e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16478083357392	3.65646728526731
Merged-chr11-89035727-6	34.0584030509197	-1.33459390185683	0.423289175828819	-3.15291289753307	0.00161650032772623	0.0274796645201868	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49742327762571	2.58038544897122
Merged-chr1-80822365-4	5.77925588946046	0	1.32688676464815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94708493-4	7.90931312816348	0	1.29422364772883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108083574-3	9.29060625335268	0	1.29190532651917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77763280-3	14.5400432603982	0	1.28715177281761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84601235-3	10.8067145872479	0	1.30061046504435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24933504-3	6.19328537982651	0	1.29672924466853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79374600-4	7.67049292309126	0	1.30674527610771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90214189-8	38.8095681993022	-0.727273481476074	0.336780487477505	-2.15948817855622	0.0308123134739272	0.262064572050592	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69949797295207	3.99103093936721
Merged-chr17-86937970-7	27.4977064562657	-1.3819008845914	0.388537913211343	-3.5566693432044	0.000375586406205756	0.00882526763751218	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83478350855023	3.47968115910761
Merged-chr11-93729343-4	16.046498850987	0	1.28366227417637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59457373-2	6.61723993732188	0	1.31143181501049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90107145-4	7.69994507741654	0	1.29654186533201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84267015-4	18.6058659780803	-0.799146666131443	0.607966817854087	-1.31445770174128	0.188692223467756	0.977275266285487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4575446787405	2.85412670560938
Merged-chr5-64281850-2	3.10023327915701	0	1.38984980729503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124753890-4	15.5778449468477	0	1.29923035350922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59003866-4	6.31956663570227	0	1.3139892025719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102229947-5	18.6720394183568	0	1.28677327164996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71235313-4	14.2620830384791	0	1.32318460595423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171551573-2	4.35773771206085	0	1.34997290765886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60902690-4	10.0247806748432	0	1.2873072602304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38415792-6	16.5845152713294	0	1.28797787745871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17185265-8	54.0124108807375	-0.431529710576437	0.262417477140982	-1.64443967405647	0.100085415667503	0.621453969233054	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.69841536114596	6.27126388572659
Merged-chr19-5713692-4	7.79855401113056	0	1.3071918409894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86602331-4	10.1062602508275	0	1.28467701966233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9902557-4	7.65973020388964	0	1.28919024044112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86891724-3	8.6219463098914	0	1.32560356450507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106497159-3	10.5040774120751	-2.87260419947343	0.649079853791107	-4.42565607713026	9.61496079764951e-06	0.000490093001780971	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62848036597965	1.21171060354126
Merged-chr13-59073775-6	16.0110114436835	-2.00554559754742	0.485345835830103	-4.13219904136454	3.59309064511877e-05	0.00139841632695611	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64226909563197	2.64492808120042
Merged-chr1-165734476-4	9.06792708853634	0	1.30046619363226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108817411-2	3.39692112544305	0	1.38015452701128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-110933620-2	13.0622055508823	-3.58790139936038	0.694042323354568	-5.16957147803134	2.34631382072331e-07	2.50936535071989e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04445597903953	1.46928333126936
Merged-chr2-167300246-5	14.5305585984832	0	1.31703024757135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131560887-8	35.403596322405	-1.32719410872704	0.340973989727557	-3.89236173054576	9.92730798345169e-05	0.00314907702663415	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12864519642421	3.82929659222791
Merged-chr1-161351102-7	32.6206292812182	-0.197912386310544	0.358197943623956	-0.552522396717935	0.580590494032298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9403703323622	4.69238863894177
Merged-chr10-57791512-4	8.26127765989471	0	1.28718136800562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81669269-4	12.8435920344707	0	1.29825272881066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53284637-8	42.3023228549567	0.150465295915915	0.269948447078052	0.557385299099016	0.57726420746685	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56353911961027	4.75265245076069
Merged-chr4-67473226-1	2.79198728686608	0	1.48318805042225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112875777-4	8.3825942246913	0	1.2888797331043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12960083-3	9.76584762082824	0	1.30572220125871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72362032-6	19.8487963308563	0	1.27853258242709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83699539-4	10.1777998798314	-5.40227257210781	1.0282383528743	-5.25391078538016	1.48903029390884e-07	1.73135540188198e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21977300640874	0
Merged-chr18-50058660-9	61.2423340836908	-0.455783788104201	0.244532249633739	-1.8639005234969	0.062335675212687	0.436029440424775	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11777185677835	5.5490348574434
Merged-chr12-24593225-7	51.127924117927	0.0062154257987843	0.449981932857965	0.0138126118960118	0.988979480655853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58290254596609	4.26227033524096
Merged-chr6-125271703-8	60.2399864565873	0.0702549169248334	0.294550730964161	0.238515506971808	0.811481289539085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62446628507591	4.60905464960766
Merged-chr4-128733692-11	90.3162728970935	0.0982171813107268	0.208223068004217	0.47169212447075	0.637146559319359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86537805784627	5.94473603002964
Merged-chr4-19951248-2	12.1017030032155	-2.23477193640127	0.604307609323999	-3.6980701581785	0.000217244850767927	0.00583380517545922	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82553591285815	2.17129981640246
Merged-chr3-86961310-2	13.5332615427824	-0.73517512512753	0.492265215605928	-1.49345332926399	0.135318562235892	0.770945421324773	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90345393055566	3.85253147590983
Merged-chr4-8645701-1	4.47784960945491	0	1.32326062333552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46506520-4	10.7227373800013	0	1.30146545962604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30698074-4	9.49331627728026	0	1.3150482273587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13624152-4	11.4818363956111	0	1.29188934253097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133755145-2	4.666737508148	0	1.325550202571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100898706-4	10.7120577323337	0	1.28500876178727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97442516-4	8.82494060653435	0	1.32001194408069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67888240-8	47.5393475475604	-0.992937455214694	0.296414458939287	-3.34982800355927	0.000808617541329689	0.0161343272841923	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59584691893004	4.54529185106394
Merged-chr12-91185758-2	4.47423213476301	0	1.39237494395785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45377511-6	41.6581276429581	-1.41214906086478	0.343864517386103	-4.10670188247184	4.01348685506287e-05	0.0015364107324601	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39093026641133	4.89295204926836
Merged-chr6-135184026-7	77.0401718970536	0.023747158802985	0.261601419020185	0.0907761085239093	0.92767049429253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9083135836568	4.97995350396956
Merged-chr16-77084875-4	7.04265824994503	0	1.29289950586928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71286399-7	38.0107451088495	0.174854562698899	0.359453888815188	0.486445043828138	0.62665166071831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58583371104923	4.70934047694996
Merged-chr18-5821571-3	8.26070827620329	0	1.29693104129573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67359308-4	7.8094797764173	0	1.29051071339375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99248122-3	8.387801453886	0	1.29479822023999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9111940-4	25.0104978260062	0	1.3017804590892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60089343-4	10.5525944428083	0	1.29696718548683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113978467-4	12.0397766615756	0	1.3076978950816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21009688-7	27.9822133493805	-0.890857564104406	0.291996530667394	-3.05091831765343	0.00228142630934494	0.035862901999147	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10280297581262	4.19128056248286
Merged-chr16-97481005-4	8.29516004933568	0	1.30751516412291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37338048-4	7.63600868326319	0	1.28980940289453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150598406-4	8.35101934584614	0	1.29418589448826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74797602-3	10.0118412912639	0	1.31354540812727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89486136-6	25.2575206843642	-1.18056640150487	0.430065761682886	-2.74508344232102	0.00604955137873176	0.0752979017894486	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68618536862695	3.28599728195999
Merged-chr7-106651947-12	58.1197111540053	0.134623774282283	0.263827597751165	0.510271766220819	0.609861079991164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60995812716353	5.79095425421246
Merged-chr6-103649159-4	44.197923950342	0	1.36069629440607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32196148-5	50.7296733524213	-0.225474537718512	0.492490961940945	-0.457824721960174	0.647078373042977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98715433785603	2.26292282237182
Merged-chr3-52017946-4	19.1384838616829	0	1.32599078819367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134350883-4	8.01430438806729	0	1.30228322371446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59659947-3	8.75368900685708	0	1.29055170001019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109870091-1	2.70318707361846	-1.62044782103829	1.08202157488806	-1.49761137730172	0.134234249057986	0.766553459664698	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6739415730956	1.43116362910629
Merged-chr7-64061311-4	10.4589171627482	0	1.31309708667586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105733551-2	6.09890404271938	1.94653063533271	1.26047411661283	1.54428449555431	0.122519426939379	0.720071147821353	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr12-85304933-4	11.6761129488629	0	1.28526668605557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137969446-1	2.64170429743148	0	1.36388715459559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80971830-2	3.73647672841008	0	1.3281982934951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94913567-4	15.1883651573832	0	1.28629022793471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77253041-2	2.19067887895672	0	1.48650411564177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55922385-1	2.66302034499621	0	1.41066633834427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123108582-1	2.78429013798277	0	1.40630009408937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58303263-1	2.65778857733733	-0.393067614502338	1.38110394351544	-0.284603933214347	0.77594759755607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794807375335281	0.803125334851723
Merged-chr19-12474778-1	3.72321765936177	-1.79746165887768	0.948185894805903	-1.89568487437331	0.0580017265835137	0.414053460652199	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19363096000954	1.19133112147929
Merged-chr6-17291739-1	1.5329707752088	0	1.76123250341453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31761871-1	2.60952621976039	0	1.39022335757771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117897351-2	5.80759605418153	1.93195366194617	0.977930638642896	1.97555285171063	0.0482054430830055	0.361392599010299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	1.83015051550866
Merged-chr2-167944478-1	2.27867585507158	0	1.40743253223872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34772851-2	2.61582116406133	0	1.89139518896036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136355066-1	4.4727222317839	2.14691951835197	1.23843553511393	1.73357389826065	0.0829937150728898	0.539374781987916	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44362823028085	2.41455337443306
Merged-chr2-28389991-2	3.37614610034787	0	1.35564453806789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4_GL456216_random-34969-1	2.62320151049952	0	1.95320980174182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89753745-1	2.60543402342124	0	1.37910328829029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125380048-1	2.65155141774645	0	1.44403285395163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13551437-1	1.96718652647582	0	1.46867527840217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125696440-1	4.02207823663781	0	1.33381730600261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93070731-8	74.5634527437545	-0.189093352908079	0.319177135712063	-0.592440158616703	0.553555881440445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67577886486439	4.52348716064593
Merged-chr9-115236365-6	26.9941348310955	-2.36940612308053	0.465013005479759	-5.09535452806527	3.48089225261092e-07	3.47801812139317e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23470936063976	2.44575596919856
Merged-chr3-38105652-4	9.74256108821436	0	1.29196196818603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182369653-4	7.99521580797417	0	1.30478140317362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12473920-4	8.17924173965098	0	1.30532966397097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7923660-4	8.66386848908396	0	1.2998906318705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136170305-3	6.26696522663762	0	1.31879261469649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30840925-4	7.67730022055334	0	1.30566919711103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91084628-12	74.9962092192438	0.151511270850726	0.20098589741474	0.753840308198728	0.450945117005412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8779139228332	6.0128520456448
Merged-chr19-8807043-3	10.5759326952586	0	1.28525448279787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12473469-8	34.2932290627307	1.91783098306138	0.335525393434572	5.71590413300671	1.09122248130484e-08	1.91171646818622e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47815084818764	5.43144878535481
Merged-chr5-125384664-2	5.12553245965832	0	1.41816878911509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84119350-4	9.89050066617322	0	1.28944099398213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94267103-4	7.46769852279859	0	1.30776994621553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109923520-7	37.7000684116699	-1.55794831822612	0.680581257529443	-2.28914372970185	0.0220710027485267	0.202478133596128	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97041434581343	1.19454903376793
Merged-chr13-105300886-4	9.05722751605086	0	1.29563314134504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-44049542-3	8.48445372426895	0	1.30003280000013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41006467-5	41.1737273472625	-1.34538384530004	0.256801328627218	-5.23900656002075	1.61443300465365e-07	1.84757861860065e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9454449175255	5.60677386980641
Merged-chr2-68436441-4	13.4015998512517	0	1.28811741217924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100907447-4	10.508825557981	0	1.29903069712161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107819348-3	7.65244399841187	0	1.30545477727788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50855178-4	11.2097138152123	0	1.2845549865502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70977786-4	15.9615779543743	0	1.29046381905332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38342455-4	9.66940932728856	0	1.28928941809298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32672563-2	9.39963712206394	0	1.29715100855108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46933845-4	9.71034676977816	0	1.29174848642587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87982978-5	22.5114038027554	-1.60966945154862	0.443155509666076	-3.63229028284345	0.00028091685679657	0.00708756483560951	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87834995742207	3.17799977121877
Merged-chr17-50410078-4	9.23870933497559	0	1.28642496366136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122464100-4	6.90304267794753	0	1.32332180736588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19893986-2	4.29644628728929	0	1.37832364529711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25969530-2	8.14790258092309	-4.71618928106018	1.05525601057523	-4.46923707024358	7.8499088325181e-06	0.000416150806834497	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56128054261366	0
Merged-chr18-36025745-2	4.24445537136416	0	1.35631391507241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31115729-4	12.5964199057676	0	1.28819001687522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29785979-2	4.37799704997104	0	1.36017296718584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13563621-4	13.4459002765066	0	1.35110205471488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32560489-2	5.9189415195067	0	1.37392688837765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85249553-4	11.0282370133832	0	1.29308122597155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82795512-7	29.5866174182031	-0.885574990457801	0.344582440759661	-2.56999453746243	0.0101700118600821	0.112372268347806	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24654461679765	4.21515779620621
Merged-chr19-41442652-4	14.2367320554138	0	1.29133077616336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19087171-6	33.5397666647892	-1.14050601020519	0.453356002822068	-2.51569628086036	0.0118797507529108	0.126373578457719	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36082832536685	2.4134144825228
Merged-chr2-128342456-2	6.62460524455297	0	1.30055971235144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96510787-4	15.6418644797382	0	1.284863158599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5339431-7	100.748343083367	-1.35172883885219	0.325077158183127	-4.15817846571279	3.20795365256128e-05	0.00127743412175667	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29432577779937	3.61688700504587
Merged-chr16-87638292-8	33.8039607233941	-0.712525218984077	0.296761394786233	-2.40100374072352	0.0163501693589188	0.159968502213067	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79969223960671	4.89953115557621
Merged-chr12-34595218-3	10.959875525842	-1.7092288261165	0.686207712038231	-2.49083301765818	0.0127444000212546	0.13310218089155	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46332522868676	0.843323834477631
Merged-chr8-71521781-8	46.847279375008	-0.201599907969689	0.27727991165514	-0.727062796458274	0.467187488004468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10098685408389	4.89028965298904
Merged-chr16-93026411-3	5.98237174620188	0	1.31040081196011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25139555-7	32.0886116119531	-0.253663849906622	0.33591692638042	-0.755138636924035	0.450165802608029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35869014052197	4.9157679785575
Merged-chr16-91601955-4	16.5669231014947	0	1.28085138053992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102690245-4	14.3144717539773	0	1.29118094254849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112811020-4	19.4852293356614	-3.19156728861311	0.523154152913105	-6.10062497036744	1.05654538929966e-09	2.68642081747765e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42930384599452	2.1359713465465
Merged-chr2-69635909-2	8.26926113321537	0	1.31195088330142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29149077-2	5.03649535121991	0	1.3299022865699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10553167-4	12.1248228391978	0	1.30966000275751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50491685-4	9.73849379377373	0	1.30425858429491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167102123-2	3.64106847479708	0	1.3322670396748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32200218-2	6.04294407539604	0	1.30654331581413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34467687-4	12.063671476427	0	1.29371061717929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127492868-5	37.3489494382594	0.216333303697971	0.37000716460292	0.584673283097459	0.558767421766779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33003024960122	3.34376130351226
Merged-chr4-47349906-4	8.52184314664378	0	1.29166486236434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102672166-8	49.2098591777273	-0.583234380287253	0.321213712775228	-1.81572067782603	0.0694132304651524	0.472388768795652	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28046047731853	5.67221398743944
Merged-chr3-61442380-6	15.9755352854447	0	1.28425234392778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46817892-6	33.5073949061351	2.14172445144663	0.341464139073447	6.27217972949702	3.5602826169625e-10	1.05750103585469e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70246095496126	5.88691887633948
Merged-chr3-61404331-4	13.7337035952234	0	1.28778490800462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85510943-7	24.3278109120654	-0.505480571421268	0.325869245805337	-1.55117605581971	0.120859498622717	0.71381822098699	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82605305388213	4.30367269952353
Merged-chr2-131091024-5	42.8568119113811	1.27493543859041	0.559497588457017	2.27871480573567	0.0226840240470824	0.206824366594202	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02875015438616	3.47310746003418
Merged-chr10-105286459-4	9.23199261869975	-5.51990485326191	1.06051894380238	-5.20490924327186	1.94091440020738e-07	2.14332745881612e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37067948765415	0
Merged-chr6-39778685-4	9.26258719325864	0	1.30483557164548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132747911-13	103.734199515449	0.429241860814508	0.207913032525304	2.06452599724487	0.0389678716077638	0.310157678207178	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52980679063576	6.93424159668659
Merged-chr2-160057639-4	7.64575623627618	0	1.29561349418769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44539080-4	21.1696615795554	0	1.2859738032229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-51012484-4	9.73350535223125	0	1.28729386903225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71353913-1	4.9419262661316	0	1.36966636946101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126738156-4	8.24931985046738	0	1.2993878225013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12433283-8	26.325682441231	-0.237008838827557	0.305612726488864	-0.775520187102526	0.438032341570211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06776141299461	4.78765246372808
Merged-chr1-131090363-5	24.7877246984917	0.138480409760197	0.620236665554824	0.223270273188898	0.823325161878097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03530707365759	1.79795952835561
Merged-chr10-121454296-5	25.7548819149078	-1.10181243156729	0.339252275023594	-3.2477672596025	0.00116314370597443	0.0213442259507457	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13305947411741	4.99300080482371
Merged-chr7-30332125-4	15.8368869447567	0.793284011507204	0.489280661068705	1.62132713313149	0.104947498910263	0.644152939464359	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68109717336385	3.40149498438235
Merged-chr17-50361885-2	6.3584293648016	0	1.31089570286077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91489071-4	10.602440736297	0	1.30064042645836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21035039-4	8.91266883451526	0	1.29330274157537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29986462-4	8.44194916733763	0	1.31057728226265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136236524-4	13.0519036942426	-6.51307165502208	0.998741558269338	-6.52127830377682	6.97107006288983e-11	2.58607286990453e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25465879481782	0
Merged-chr4-144906659-4	14.8204401116404	0	1.29845738340017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53704601-3	15.7072770550542	-2.63565035290784	0.705110347540998	-3.73792607369812	0.000185544482154962	0.00515063285084882	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15904443949664	0.961728545204858
Merged-chr8-4193469-4	8.31322504155339	0	1.29511985595155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41268008-3	11.1755671082688	0	1.30163461752283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84770326-6	34.3369866648876	0.0598150843097115	0.344583889133056	0.173586421756981	0.862190503877428	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72817228718896	5.70886446442219
Merged-chr2-117087711-4	8.57140745482143	0	1.29421484501224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119053872-6	22.0130225218004	-0.354735157378633	0.356257783878261	-0.995726054086307	0.319383267413775	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75979703788209	4.33865464176626
Merged-chr18-88924545-1	3.95005354496853	0	1.35773839296217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112871785-4	18.2619796243462	-1.61875388785352	1.09249047094155	-1.48170984636453	0.138417516023088	0.783594473017821	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3916931410168	0.420961122473315
Merged-chr1-43811961-4	10.1003907845995	0	1.28693532027096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110525901-4	15.8395677481053	0	1.28286240920132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191963541-3	8.10311588246446	0	1.33243256106406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16573377-4	9.96948115363867	0	1.28466380444461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31769584-7	26.0893185592235	0	1.28138588345317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172247734-4	14.5995352303092	0	1.29546568349471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124752009-4	9.04378921705137	0	1.28858616154995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118976498-6	20.5422141005968	1.74928045509572	0.49059290681751	3.56564563161614	0.000362961540988563	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99166327437972	3.94870620507401
Merged-chr12-79612897-4	6.52634371358844	0	1.3232079202173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105485186-3	5.92414008862849	0	1.32056562242469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99168586-4	7.81168522418648	0	1.30287277795252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51365442-4	8.48716440336914	0	1.28805295675782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88225966-4	8.82773590970582	0	1.29347642311167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11459222-4	14.7299091215518	0	1.30973023778087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45561287-1	5.51793794552836	1.87711182632588	0.999023589553723	1.87894644926694	0.0602518055958062	0.425001563953319	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	1.47158896970822
Merged-chr3-115818907-4	9.27840354862905	0	1.29872473662208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135236881-2	6.86752217957896	0	1.32988866099851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75068995-4	14.6167694036725	0	1.28694698716282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14323330-4	19.6573951025023	0	1.28030804176105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17741710-8	25.7664497045176	-0.921010390943198	0.324322472788898	-2.83979825086831	0.00451420737915244	0.0601274756212995	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18321786449967	4.22818590047637
Merged-chr6-127582138-4	8.12370235768616	0	1.29826553171488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65549649-4	18.2731853026638	-0.355829721493329	0.395532800329493	-0.899621273373308	0.368321832179887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03233920392493	4.74927476471381
Merged-chr1-128615676-6	25.6198922839356	-0.209103940674487	0.345081379070196	-0.605955445170373	0.544544339907956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26455643659818	5.10122894146198
Merged-chr1-86218223-1	2.24025864335555	0	1.55933132669758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159586401-1	1.70571088122097	0	1.47643174104218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35252187-1	1.73695987962286	0	1.50787668167087	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94645479-2	4.85505435657207	0	1.31523471015902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59052233-4	8.63846404046503	0	1.31001311775232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26331435-1	2.84507285630865	0	1.39329941647529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71415694-1	2.67635192427081	0	1.36057186609727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-25793243-4	8.26159175837255	0	1.29769206010773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81396808-1	2.06291019719415	0	1.36480307514288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65669058-3	12.9975043858936	0.042129352992694	0.393350577695668	0.10710382895456	0.914706609576555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86280766188356	4.92306072269272
Merged-chr14-79494434-4	11.6730948044698	0	1.28284019808767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145773091-1	1.97509696797221	0	1.50016956825267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12091037-4	6.11707914999302	0	1.32101516645932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53881372-4	10.7756491197619	0	1.28987067742224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148676393-8	48.5749627226535	-0.5090058144661	0.290552154462119	-1.75185696147527	0.0797984066768545	0.524356822893262	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7937933530282	5.25691112743623
Merged-chr3-51654474-3	5.65463697564615	0	1.32819457689754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5017043-4	11.7499434848642	0	1.31899047198507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59456806-4	10.9222208884738	0	1.29626150616772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3188416-3	11.7121562271443	0	1.32771516507371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53860192-4	6.90691005985121	0	1.30832584503971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17555017-3	13.936407258663	-3.59925381553263	0.698251905177095	-5.15466379518114	2.54086382847216e-07	2.69028558809612e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61191060579864	1.52944205045577
Merged-chr1-180401315-4	10.6047114127446	0	1.31212238784612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79356391-4	12.2574081576553	0	1.30050472782071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84618790-4	12.0190845738409	0	1.28182055975636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113421665-4	7.75434058434425	0	1.30706949553179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23813514-7	42.8028824672164	-0.833291541074976	0.326797032781031	-2.54987486876394	0.0107761589168486	0.117500230365491	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91908849016096	4.0806373838041
Merged-chr5-43948315-2	11.4966670515148	-2.5240080061046	0.647511704122487	-3.89801140278253	9.69858506711169e-05	0.0030870128582342	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54532232079962	1.98088044523647
Merged-chr8-34816341-6	19.8878580234721	0.398821078141838	0.423791055761146	0.941079507743595	0.346664116135977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73331638575768	3.98090716127875
Merged-chr17-84116405-3	6.32671941813022	0	1.35193782180875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92700391-3	6.67304150725117	0	1.32674906394174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9705949-4	7.97280206649239	0	1.30564724191994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157139066-4	8.43240782261951	0	1.29438319653596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19952538-4	8.74392625415037	0	1.30884198395261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166733099-4	9.26242426667674	0	1.294332800851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153609788-4	7.23407741425687	0	1.30508331685878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116814722-6	53.8647262098173	0.625353933906425	0.227366829038068	2.75041850454678	0.00595191945407405	0.0743265203100778	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.63689869616324	7.28407339830101
Merged-chr1-60158626-6	18.6661633776213	-0.486829986805494	0.384360265533601	-1.26659811239759	0.205299027745039	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1594240997544	3.66787678648267
Merged-chr19-41597729-7	42.7463689762911	-2.53751685647158	0.373590285935338	-6.79224528046423	1.10401632626169e-11	5.48562273509569e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96564682668317	3.40333148886017
Merged-chr6-143074184-2	8.36046963731003	0	1.30674996379867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79809362-7	27.7236944749472	0.464656876937551	0.284565495550607	1.63286443438437	0.102497511678386	0.633229920350757	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97503835294568	5.43215168637046
Merged-chr13-22051048-9	53.1917521302376	-0.796288735442335	0.285989447648444	-2.78432907923646	0.00536385828953598	0.0687402792288719	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29932188924505	4.35831347537675
Merged-chr5-67327445-4	10.061169933194	2.83464779890304	1.12875375409374	2.51130752710448	0.012028485959454	0.127558169994561	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr8-111923683-4	8.1454371318599	0	1.29507074864474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86593232-2	10.0839343631444	0	1.32899953820339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20827649-8	39.0956177661653	-0.982039815023579	0.297965777987225	-3.29581410877891	0.000981369276442875	0.0187784939204791	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52599420880949	4.50920843016181
Merged-chr1-180391020-4	5.70339607253961	0	1.33334490785272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54211929-3	7.25991653795565	0	1.30462615479883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18733771-4	15.1962404893535	0	1.29979375178317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97820861-8	57.7693167698552	-0.350665729216143	0.313542695788433	-1.11839865487653	0.263396768577211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87805208030513	4.31370018762929
Merged-chr14-21890587-8	62.7274378523576	-0.716159308486656	0.282018734645452	-2.53940331087222	0.0111041733800378	0.120199390864384	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10869832906446	4.54176319076494
Merged-chr19-53479652-2	5.32689830305686	3.91960340448293	1.08860954926578	3.60055945414639	0.000317533207210855	0.00780938086503596	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.96353301543917
Merged-chr4-155116715-2	6.28304353238114	0	1.35220190800077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61498392-4	7.63702625381787	0	1.2955788033206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67729438-3	6.45079179744215	0	1.3018966613874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-78237299-3	8.60437997916498	0	1.29861704033282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179847931-4	8.37382009577698	0	1.29222327458694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20085767-4	8.62315274638524	0	1.2989133485633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63817728-4	10.3245409630893	0	1.30939334656687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67712023-2	6.23059655908025	0	1.32081504299149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52304096-4	7.41459748903834	0	1.30228800855738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33583982-4	9.50172368610645	0	1.28916596937814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51185606-8	40.1703791228684	1.52377310334678	0.341150090912908	4.46657686436258	7.94811136273457e-06	0.000420548408995347	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3619539177407	4.8945543668201
Merged-chr7-128221177-4	15.6698992020387	0	1.29625905585664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80322674-4	13.6493478637618	0	1.28925803070254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11589062-4	13.6172004238213	0	1.29168033239389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39446164-4	12.6515668485791	0	1.30396480995336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108764998-4	11.0736505338822	0	1.29298682641836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145002440-3	19.45802632801	-2.94394396198077	0.521918893682139	-5.64061580758504	1.69443058729594e-08	2.78902421051488e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02898006761131	3.29398433573242
Merged-chr16-57176498-4	8.47657917817854	0	1.3000925050795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79742174-4	11.0697150073356	1.74363041449938	1.10260306745599	1.58137635016961	0.113792011643429	0.682911297069815	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.989878296978726
Merged-chr4-129678106-3	12.5730055694513	-1.71395132350739	0.636850886751411	-2.6912914139922	0.00711759916776573	0.0850597357748389	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34052377601953	2.85496198186545
Merged-chrX-155191901-2	9.32355935110071	2.25261079262238	0.566026983606067	3.97968799697739	6.90057725638287e-05	0.00237079453940902	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50055076154118	3.75384802253899
Merged-chr6-87521411-2	7.30460554044956	-0.12211459838224	0.662700489420172	-0.184268157835653	0.853803092531897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21964197141136	2.06632714266925
Merged-chr6-51534006-4	11.720164551074	0	1.28942027127201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57759192-4	8.5152505371425	0	1.29564240275004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33282112-2	4.11567105958648	0	1.30955134376449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65562278-8	50.1077836698976	2.34606914887177	0.318095295919979	7.37536574405033	1.63894487023301e-13	1.55215205058328e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72163040238327	6.09516019149526
Merged-chr7-122329778-4	9.41998622401888	0	1.29952406382509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117866326-3	8.85457362073328	0	1.29927903243719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136656378-9	105.859458369794	-0.501816007867156	0.207770621675268	-2.41524044073691	0.015724825551202	0.155371176400733	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.61737636921902	7.10368498773739
Merged-chr18-5760474-2	4.40634958578407	2.0336172508581	0.945856009249957	2.15002836686603	0.0315529710291416	0.266183894251263	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	1.85375318208663
Merged-chr5-19901853-4	10.6832800515769	0	1.30252160497237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16889681-4	11.8431785958731	0	1.29198824950115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118610810-4	10.7165688625492	0	1.29222469902346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70803798-6	29.858240841297	-1.60049023699536	0.506890140228477	-3.1574696565886	0.00159144798577863	0.0271385073274243	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96813217354418	1.69442907999601
Merged-chr12-12230362-10	90.5905916564026	1.11119529338408	0.201288670262053	5.52040654815514	3.38216230320088e-08	4.98895661094729e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47890002066078	6.66073198751318
Merged-chr4-141834085-3	9.12567321565966	-0.499028230922264	0.729544016183308	-0.684027584151792	0.493957747648277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69979011901802	2.4306872510886
Merged-chr4-6335740-8	66.9234143910481	-0.936419411706237	0.257188979340301	-3.64097798478063	0.000271604363019364	0.00688628602823373	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43502622076347	4.3815132275586
Merged-chr2-71505054-4	15.114223558287	0	1.30692446247432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12585393-2	2.48429662469337	0	1.81717967145051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70737567-2	3.69897101578761	0	1.31164202492856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38185256-2	7.66674641813425	0	1.29485954612783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41597340-5	40.5957077690084	-2.02786068798166	0.40871160074241	-4.9615931730299	6.99173175793772e-07	6.04340877584918e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21242324798837	3.26426741654096
Merged-chr1-189799105-8	30.2555104057048	0.729647054673593	0.295734842054236	2.4672339911162	0.0136161348022395	0.139679740154968	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32812925548631	5.0383236492897
Merged-chr18-36491758-8	28.7326743987729	0.0606120728163929	0.366490795055136	0.165384980016413	0.868640975091904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24759141906086	4.48687759903646
Merged-chr1-64929247-4	7.71900503937947	0	1.29997517104974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58507836-3	13.032374454238	0	1.28332377401468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99267525-8	30.0674081948833	0.279735606989672	0.31096905087713	0.899560924795057	0.368353959731362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15014971522409	5.50830139428078
Merged-chr3-102715412-5	18.5123757809241	0	1.28060138078529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30794874-5	21.7223228475903	0	1.28692335490623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3691187-3	8.05801665483908	0	1.32593123883638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122564666-4	9.27639336265454	0	1.31662247424596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56335501-2	6.33704961272174	2.23639277712615	1.03707761117812	2.15643723576832	0.0310495397591293	0.263467500986893	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.42690496303314
Merged-chr15-59430540-2	3.83087664637067	0	1.31213425488256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116492116-2	4.97773833378687	0	1.30341298484365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91582471-1	2.35396209818748	0	1.38161978641645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70185297-1	3.15613293085642	0	1.41059673291318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95641364-4	8.46374784546487	0	1.30612077785178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83145715-8	33.149878370571	-0.975630626919288	0.315565484193875	-3.09168992106845	0.00199020623605646	0.0322789815590334	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38235618212704	4.37301447465374
Merged-chr3-27622531-4	11.5988429481395	0	1.29655769320647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3868793-4	8.7211877779065	0	1.30121832303626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106371975-10	73.8249529446042	-0.124334572092765	0.203271731434373	-0.611666812770309	0.540758223492658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03195411558308	5.89604335199763
Merged-chr2-90542237-6	23.6553960392329	-2.78804325985215	0.608929882033772	-4.57859491234086	4.68109750435097e-06	0.000274587969047862	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84759320272313	1.42629324027793
Merged-chr15-74923649-8	29.5320895171027	0.537704280635873	0.273876226780775	1.96331126274162	0.0496100175605214	0.368613831338616	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72051719078216	5.21903068098787
Merged-chr7-96546106-8	51.9080592544094	1.44520889600291	0.275667657886634	5.24257690250062	1.58349359099504e-07	1.81535038942389e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29684599405812	6.74895470275841
Merged-chr8-83859786-4	23.8295253364108	-3.31011582959713	0.674368172445965	-4.90846983123653	9.17897456541267e-07	7.51640691668492e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64741971471817	0.845523456341755
Merged-chr2-117996369-12	51.7947097555462	0.698768745731051	0.216039728897978	3.2344455776513	0.00121879146059829	0.0221046757658219	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58391560168726	6.23363520972278
Merged-chr2-101763196-7	79.2705154146116	-1.00831990094282	0.319314279180546	-3.1577663972011	0.00158982901394527	0.0271179761799185	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20262001322742	3.89563038508891
Merged-chr10-7271755-6	29.3416784355601	-1.77629807185853	0.463870025834642	-3.82930125451076	0.000128507617673357	0.00386445411158912	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84037461919895	3.21542127395646
Merged-chr6-129727444-2	4.94549225779743	0	1.30922302124604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35308670-4	14.521011820612	0	1.29779660799129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26514181-4	12.1350660763066	-3.16919639482415	0.718310003219516	-4.41201762556499	1.02411774165842e-05	0.000514784599587777	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52149478077723	1.29606516661881
Merged-chr3-152428757-4	12.0956535711525	0	1.30127797801813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74997458-3	6.7351699539216	0	1.29142281472626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17558165-3	5.13415647244597	0	1.32142579312882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21452762-8	33.5021619689803	-0.0752168491428423	0.26348566359293	-0.285468469582649	0.775285257453894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8084979586495	5.64219433852886
Merged-chr2-152927603-4	12.8025259563435	-4.09407637384102	0.88753184370044	-4.61287829039614	3.97130867436455e-06	0.000242305449705906	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74304857101698	0.683637474991079
Merged-chr1-88562555-3	6.65150142785331	0	1.293719366285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59464845-3	7.17158775354916	0	1.30596240972477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160157470-3	18.3666084772264	-0.44664115061939	0.353704748361838	-1.2627513560052	0.206678551346144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71970814515465	5.25004720653969
Merged-chr11-118270413-4	10.8447984407887	0	1.29412843789841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79414079-7	31.8257296802881	1.29319143226637	0.367785745517528	3.51615430458476	0.000437846435264459	0.0099587584959246	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36167688269004	4.78754737574804
Merged-chr1-44162611-1	2.28411307601474	0	1.4048935243081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135688157-4	11.4171947758211	0	1.29039422144628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100275612-2	2.68644824383883	0	1.42932961473032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35579069-6	22.5397173482326	-1.55597714027334	0.419157077001471	-3.71215762693153	0.000205499936095238	0.00558129626935969	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71308044968325	2.59616019259371
Merged-chr2-31075363-2	7.01980650106956	0	1.30405314838153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120112067-1	5.54678118636296	0	1.33566483604421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6370780-4	13.9750498079401	0	1.31339376898331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54840062-2	2.84971843194689	0	1.57287627087954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23885731-3	10.4233792211881	0	1.29312267969534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94703570-4	8.80420515003793	-0.623819751536924	0.955231317055467	-0.653056218319841	0.513720036161707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2237449165955	0.683637474991079
Merged-chr14-54900568-8	36.3571224532158	-0.198054758250549	0.273268575660227	-0.724762288426474	0.468597874835959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46619831791302	5.23254611364921
Merged-chr13-76566173-1	3.97759641733162	-2.64387493480572	1.05331196515808	-2.51005876915954	0.0120711070301833	0.127947860501923	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81055584338783	0.61242769162773
Merged-chr3-122638853-7	31.9896317038143	1.16797010080029	0.290944271196539	4.01441174970344	5.95942354210097e-05	0.00210158926487928	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81390584520938	5.94170748427375
Merged-chr13-118420620-6	35.7900097090136	-0.145894690709758	0.405923390767463	-0.359414347702214	0.719285142921578	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51133801594805	4.35929691274935
Merged-chr2-19274224-4	5.48947421082584	0	1.32034681893425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64357640-4	18.2577818676904	0	1.30729109845905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11512304-3	10.932499030773	0	1.30318315167868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35546911-4	8.50397616426823	0	1.31847104100145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159647734-4	11.2788569554012	0	1.28996717620534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9629877-4	6.36180120269543	0	1.32698146679482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85353055-4	21.3545764499429	0.60742445519954	0.719674671611232	0.844026445782255	0.398654627802456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38999833332037	1.72011176107421
Merged-chr1-95646171-2	5.63016854624593	0	1.3253568977728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113747383-4	7.98168240885736	0	1.28802990445256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84176356-4	15.2239673554778	0	1.28880685564184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120515741-4	8.37981976044904	0	1.29035880686642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135667046-6	19.5564205152729	-0.733467852521524	0.396210488725866	-1.85120756111281	0.0641396984168344	0.445216988819467	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64445100030878	3.84907297492187
Merged-chr17-10370737-6	19.512273332027	0	1.28064791178183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67039653-12	56.8204424043002	-1.18040582516911	0.236324464433254	-4.99485242884152	5.8880773630934e-07	5.30190228219533e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.394848202041	5.16732601992349
Merged-chr2-160084929-8	30.995382450313	-0.285510008843463	0.322563630684704	-0.885127713367477	0.376087753964376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30646989886818	4.77401455214011
Merged-chr2-167293013-4	7.70181139980585	0	1.31251396997772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102831739-4	6.19654491110606	0	1.3442484827039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43723641-3	7.93308586419898	0	1.30111456329827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9938971-6	72.4862428115861	1.51802501478237	0.431801818752665	3.51555956657952	0.000438828306405968	0.00997067959332558	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53901064171924	3.75846123796229
Merged-chr6-58606905-3	6.05348955956018	0	1.30451083134124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166031218-4	9.31105452333859	2.45527033736534	1.17777620869409	2.08466627126705	0.037099604316118	0.299002311746552	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr3-105789983-3	8.20080519823628	0	1.30428606731745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-97389723-3	6.32100804750644	0	1.31043229529872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89584824-5	39.1059996497651	-1.24587959260799	0.406493394181282	-3.06494425356485	0.00217710572662384	0.0345891443744133	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75823770126139	3.28047910283328
Merged-chr18-46621699-2	6.72518409837449	0	1.31821769087604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82374631-10	66.0071359921376	-0.0268612695663702	0.226310254871706	-0.118692233286546	0.905519189989162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07260011200214	6.05267658173466
Merged-chr6-120478626-4	23.7103898447951	0	1.31155314563999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58284641-4	7.99988844728739	0	1.29829209874473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86170387-4	9.47930655977031	0	1.29822762252782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3146756-2	4.36020835043479	0	1.33005348716751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58362771-4	8.17727277791424	0	1.28596850785924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111788504-4	13.8463143310288	0	1.27992230248639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80067761-4	15.9387631938385	0	1.2797548605135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120815439-4	9.8102227891095	0	1.28987270417201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-98329778-4	11.0892460758512	2.2165265680553	0.932961490900633	2.37579641783025	0.0175111212519711	0.168947546040352	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.40343015234056
Merged-chr2-143867582-6	12.6594636996933	0	1.29246259230104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138458303-4	10.1898204858321	0	1.30059291131951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17711879-16	82.1801749918419	-0.520812474085335	0.182561191720046	-2.85281044223238	0.00433344623324774	0.0582541406208201	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.79235730671874	6.28265426860674
Merged-chr9-77825474-6	30.9421669047788	-1.97492119443333	0.431203881382292	-4.58001720230904	4.64937687835723e-06	0.00027346370971479	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90796056172812	2.91649491165338
Merged-chr11-114858840-1	3.49500111267301	0	1.33549704870444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59206156-3	4.68561420957477	0	1.35824989592013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32657522-1	4.73723346494989	-2.73653302719702	0.906244763064874	-3.01964010025526	0.00253075215604425	0.0388750659118165	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86630608726598	1.08764913775046
Merged-chr16-25846785-3	5.52677286777712	0	1.34001099243378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47644971-2	11.0568886508665	0.470537083357495	0.652479062090586	0.721152770557669	0.470815526445813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1165310932013	2.96006934525357
Merged-chr2-156414803-3	18.2844263732598	-3.51864287034186	0.606185301231269	-5.80456646374446	6.45327589871167e-09	1.23302855812051e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46900528320298	1.51789747318134
Merged-chr14-54386168-4	19.1892612597445	-1.91427153120712	0.423136576826083	-4.52400391751981	6.06806002592249e-06	0.000339489255525626	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39254090573898	3.48910686631238
Merged-chr1-60658584-5	18.951473683806	-1.81005466834489	0.453464540602889	-3.99161236717294	6.56255801028313e-05	0.0022737906454929	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7547047384733	2.59548068020203
Merged-chr4-46507466-4	11.4281227489433	0	1.29480984183125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39562826-4	7.01372000537319	0	1.29453441239554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171617138-5	54.1881278586072	-0.220964037686814	0.415073366695847	-0.532349351744193	0.59448405714515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42163303985014	3.23217575633447
Merged-chr4-136120221-9	46.7469100351779	-1.26473145853647	0.287281436199413	-4.40241275338992	1.07053644902658e-05	0.000534826259924241	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66701205863779	4.34656755407434
Merged-chr8-68247170-5	17.2575047643117	-2.04972371882138	0.621365746839485	-3.29873947710683	0.000971200003484642	0.0186330109887573	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47265502961515	1.60978507060531
Merged-chr5-107646048-10	51.0295681198043	0.0218782890634924	0.216275475649044	0.10115936167906	0.919423955861321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2765338915244	6.30180176984267
Merged-chr1-177981520-3	8.28669971082025	0	1.30007353604981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60822343-3	11.0768343272368	0	1.28279644062813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154864386-12	55.623863567017	-0.321346613619409	0.260385234644575	-1.23411995329937	0.217158209355177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19433437746058	5.84066597468631
Merged-chr10-25434536-4	8.77867582151488	0	1.29225879127087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132865278-2	3.8260757837312	0	1.38880384680776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165927995-4	13.3265859249655	0	1.28442682722165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133615120-2	8.56062324804199	-1.02489240669916	0.489224945882369	-2.09493079885912	0.0361771445341829	0.293736076521072	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45831670075064	2.99699765796785
Merged-chr5-139456837-4	7.54431938120088	0	1.30778873975872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7086073-2	4.08238541120738	0	1.35789823487112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44526859-4	12.4908163092268	0	1.32150487460012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43396977-4	8.3498757620014	0	1.29056225414198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150078785-4	8.29764743080644	0	1.31003902023361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118026036-8	36.4017833888746	0.789474852967454	0.270818522979898	2.9151434853149	0.00355525046376311	0.0502533845565789	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71254406340986	5.50365980896454
Merged-chr15-31418260-4	10.5472782985657	0	1.29604752564425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115767548-4	8.73918701575132	0	1.2982025533022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64753660-4	17.4876154228161	0	1.30963472405887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78591930-5	39.2761061663625	-1.51652552769543	0.597497536233492	-2.53812850385177	0.0111447054268088	0.120393771006819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45386767345468	1.35700371934843
Merged-chr12-103341847-3	7.04807099457758	0	1.29633407089224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13599523-4	8.31961014474396	0	1.29930160740888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36053890-6	43.0918551441748	0.457349589438202	0.300487374688433	1.52202597500948	0.12800257236965	0.742121914121831	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18385816555722	6.61681891514585
Merged-chr4-95850469-10	48.8025523490524	-0.734348292599519	0.274120568447276	-2.67892444831539	0.00738590568729885	0.0875298137544851	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36364496796454	4.51379420215263
Merged-chr1-155322378-2	4.07030724292033	0	1.31435527866344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75429188-4	8.59623135444138	0	1.30019880612088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6774855-4	8.63577960613951	0	1.29757250372381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172456146-8	55.9360675136665	-0.737915109970718	0.250919661990452	-2.94084211702308	0.00327321322012587	0.0473525328940326	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5545510949944	4.84798829784395
Merged-chr11-44504324-8	55.4801010893902	-1.75492034254966	0.312106984306129	-5.62281663273626	1.87868788297437e-08	3.02376202957742e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52059446273013	4.74966242107619
Merged-chr19-40663943-8	33.4009085838157	0.267672944549527	0.370770102932269	0.721937778781544	0.470332732940334	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42845540932942	4.73562177789732
Merged-chr2-169756440-2	8.37423567526874	2.28200283262741	0.82241189627378	2.77476875391371	0.00552409709020112	0.0703759746309691	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656505258713436	2.31711242604998
Merged-chr3-144698611-2	5.59642705813769	0	1.31198631834414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51534818-2	6.15051926040944	0	1.3494261175693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80190545-1	4.36341295144912	-1.65754315772178	0.868750889830773	-1.90796139275858	0.0563962063639083	0.405241532994936	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40167299633526	1.44027592657175
Merged-chr19-23038572-3	12.6825325831935	-1.0541350927202	0.732228846647339	-1.43962519033056	0.149973468813501	0.829117283679109	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68848309611952	1.31734301959449
Merged-chr7-31208375-5	18.2425050965746	1.65033994725881	0.562359412723587	2.93467115499316	0.00333901347774984	0.0481042835130526	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36863265171405	4.01229215593052
Merged-chr17-67384796-4	9.15870465715918	0	1.30360934140349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111070858-4	11.3493071747023	0	1.28257588538847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117478339-1	6.03949751062857	1.86562676574738	0.666744772080008	2.79811232704125	0.00514022332474459	0.0665803996576952	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70760585989441	3.35553639627429
Merged-chr5-43872843-8	35.2203391539224	0.433994225805541	0.24061174484958	1.80371172686044	0.0712765102070442	0.482206733201109	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3429650453381	5.66333659986887
Merged-chr7-107609852-4	13.7120632560428	0	1.29530303312306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5233921-3	8.83000126314537	0	1.29302415580441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134752416-6	20.1574071251761	0.250240250540156	0.349021737151144	0.716976118973898	0.473388832121362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88641053759418	4.19562565863219
Merged-chr1-59755462-8	26.9065964886331	0.215930800562271	0.303439038515166	0.711611800574165	0.476705197613261	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96133939320901	5.29280999738404
Merged-chr11-117707058-4	8.69632965914308	0	1.28630749694631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121435953-4	13.5241187124955	-3.71715485848105	0.867843132630984	-4.28321054660188	1.84215700182704e-05	0.00082473441232289	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82818637345267	1.22237730641564
Merged-chr11-118227844-2	6.90871097047982	0	1.32121159409266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95664254-4	6.5093053556939	0	1.32762256937412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9876040-2	7.77692128569507	0	1.30358352109951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88057045-3	10.9424895766257	0	1.31856941591333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88282497-4	10.1756863891549	0	1.28787409026995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100434370-3	10.3015432092602	0	1.30924966475158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60805495-3	7.75929459920928	0	1.31992982261318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151338412-4	7.11163636087021	0	1.29125415330619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92106450-4	8.78119018634389	3.79526346065336	1.04213878624899	3.64180233067976	0.000270735927485987	0.00687048928834924	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.43116362910629
Merged-chr4-57950234-4	13.7356961177203	0	1.30148010220474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100505618-4	8.85449213512334	0	1.30624135294946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25731528-1	3.82887482673961	0	1.31844040675564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37585863-2	5.61995756008878	0	1.29826502886599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46672914-2	5.77851819394355	0	1.30074945345544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32547818-2	6.99902215420357	0	1.31591780513942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129462184-2	7.91260523665419	1.3437114803216	0.664317818810968	2.02269372019351	0.0431047347513891	0.333339881309381	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53323502905656	2.49084597027501
Merged-chr2-19627432-7	56.6482197169427	0	1.27734799275588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51824098-4	7.41004617023515	0	1.29723873620298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50908370-7	29.3894773492242	0.142360496705767	0.262547945078729	0.542226665164255	0.5876623680608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43998240231582	5.61886060308737
Merged-chr11-106677980-2	5.5075050457471	0	1.30357159504197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84148068-4	14.1514356262711	0	1.29845031497204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-158076834-2	4.81881009622275	0	1.31439674806212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91715248-4	11.9348549595316	0	1.29797250448246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117218654-4	9.83198655343725	0	1.29029151154285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-26317193-4	6.90057240991956	0	1.30515880955089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34332938-4	10.4126463330239	0	1.29356776185979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64072147-4	7.57109625557155	0	1.29512494216958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80663741-4	18.2492862870049	0	1.31190381415296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54628510-4	11.6222744277381	0	1.29758071421046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8689474-15	121.636187402253	0.532896674157949	0.159419855788623	3.34272460304144	0.000829601881059811	0.0163978114094781	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68825706474724	7.21637523490959
Merged-chr7-19500528-5	14.5225253583953	0	1.28055007661689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53693915-4	7.50447038417404	0	1.29478694458347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118153183-4	16.7749376733029	0	1.28873639028515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84815727-6	25.8518020918611	-0.803197752269236	0.39795589642485	-2.01830845951773	0.0435591462355608	0.336244251606997	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15953910657832	3.3358128240784
Merged-chr8-80952574-10	88.756444829196	0.593591978484457	0.216269209572276	2.74469019264659	0.00605680464279458	0.07537382521197	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83417820202394	6.41652104728003
Merged-chr1-80765758-2	3.44741399063567	0	1.38788438904597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41096247-1	3.31937854306429	0	1.37559501372269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107013645-1	5.7211376440775	0.0913711892196766	0.831920082184271	0.109831690779449	0.912542857469113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81163775818326	2.62235589016187
Merged-chr16-32114070-1	8.80381228614994	0	1.29255980074918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51064922-10	80.204336319124	0.879901449371368	0.216212550513013	4.06961319906547	4.70912550200827e-05	0.0017307228068292	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78964217417722	6.63535988379383
Merged-chr1-152887999-3	10.9534809501876	0	1.28902555936943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148248857-3	8.27327694404634	0	1.30810301705896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180387108-2	6.7163866809576	0	1.30140396489814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7931837-3	4.50999352689933	0	1.34204339839806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79527659-1	1.85723389826571	0	1.60802112598842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135957782-5	78.7521689564827	0.610245457376317	0.434303681308308	1.40511232955244	0.159987878328243	0.868175377614796	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6399561726371	3.66360761615467
Merged-chr11-118234639-3	10.5779380416025	0	1.29577743371207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57482345-1	1.78211353844463	0	1.62906824926531	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103102573-5	36.8383483230267	2.34784203841609	0.478084213754882	4.91093822148214	9.06416445306982e-07	7.45978451322796e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2908300409689	4.24958000718485
Merged-chr15-84981752-1	5.83231338896921	0	1.33426787523547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39835513-1	2.92678125565515	0	1.43138265411703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10911189-3	7.1773926372128	0	1.31852268441759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125619355-1	5.39576042520942	1.11633954323398	0.916700273774663	1.21778030962866	0.223307468816786	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63679221592917	2.71129485608035
Merged-chr5-90612189-1	1.44181257963	0	1.58568486706655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110177679-1	2.26321697591726	0	1.49305349509565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65777114-2	2.7911554684174	0	1.39410194859914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28750808-4	12.0603974821363	0	1.30377234486108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36814995-6	31.0888332592561	2.35616302681514	0.456356659889744	5.16298595792246	2.43041378494887e-07	2.58538979520681e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.930184474129	4.83713719508092
Merged-chr1-77761569-6	33.8716133169236	-2.53096055444047	0.456093138205133	-5.54921866266303	2.86949104943372e-08	4.34050375269204e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66762267475239	2.66233882691751
Merged-chr7-115084877-4	10.166957149237	0	1.29650684359817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28350231-6	32.9809138775397	-0.0439349315574734	0.392954526544815	-0.111806655960388	0.910976709924663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75212498942116	3.59886308470072
Merged-chr17-71192180-4	12.8525282012086	0	1.30453117988251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55957997-7	22.9778404769834	-0.126215568314356	0.348894092552567	-0.361758972159549	0.717532153938389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72972701541953	4.55551473268813
Merged-chr17-23924765-8	61.1930329222597	1.11586955297935	0.337005106027681	3.31113544875397	0.000929182209691347	0.0180280108891006	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89936693074104	4.68952119831555
Merged-chr17-8846637-8	34.4442133740592	1.00254677170835	0.337100784129277	2.97402681603931	0.00293919387716773	0.0437903700632473	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15331017533913	5.20104936393051
Merged-chr17-26237184-2	8.51290063473549	0.0717066405016516	0.929574378839491	0.077139217833405	0.938512794611538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10658790029851	1.04220233489076
Merged-chr2-19629037-4	6.91325717738614	0	1.30187460761905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118972907-8	26.6366576799573	-0.164946990197477	0.351147627530001	-0.469736877784785	0.638543017025218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48328758346186	4.22995225697461
Merged-chr9-100452809-9	49.8887453240094	-0.612674615963169	0.232588301909431	-2.6341592029067	0.00843459292381683	0.0971037333543783	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96351207816334	5.15209941159275
Merged-chr7-106526862-5	32.7326994706282	-0.804710210117889	0.392727419257485	-2.04902986310282	0.0404591948728051	0.318804600043207	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.41821370405433	5.48545475715967
Merged-chr9-61432002-3	7.76005153353569	0	1.31931681732292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16554551-4	10.6739470049763	0	1.3081873475767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119711023-4	10.4285989898025	0	1.31065258115467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70868710-8	39.1167569040558	0.155522840260017	0.253990742605641	0.612316963463072	0.540328068422556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81429415941542	5.96307398745093
Merged-chr10-127592567-7	38.5279934292703	-1.06357258465016	0.330054526714527	-3.22241477866496	0.00127114973524345	0.0229206817326762	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42381823534707	4.25386919683452
Merged-chr16-30776406-7	30.266535504235	-1.75584879652389	0.457960744477668	-3.83405961689259	0.000126045571148267	0.00380108511745783	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00663326558473	2.47601477343803
Merged-chr2-27418702-3	18.2891963026884	0	1.28972279642598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6258664-4	8.49485280803094	0	1.304510200351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191110081-8	30.8532686894087	0.36048552672903	0.329507180921175	1.09401417511221	0.273948761315429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02410287357148	5.35543809365046
Merged-chr1-151958667-2	6.5638934198492	0	1.31230206282736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37928015-4	13.1078207854308	0	1.29313741910154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33820367-8	44.5277636017864	0.294471079743584	0.315218589506285	0.934180564048594	0.350210759687466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57320763116948	4.36064547559853
Merged-chr6-91693671-4	12.7736086617321	0	1.29301578268858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53390589-6	24.1713317197725	-1.6376530825825	0.471731150954627	-3.47158138543201	0.000517402470259869	0.011273818546716	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53490000754292	2.99059730437749
Merged-chr13-111555443-5	17.6429202211999	-2.29910808680341	0.440934654827673	-5.21416963178354	1.84642448390293e-07	2.06250349273711e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29377962072981	2.32556459181442
Merged-chr4-46088063-6	20.4708567179534	-1.16854827481107	0.438032056920215	-2.66772318680756	0.00763671485188672	0.0896727347190278	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98855611053333	3.69081629584433
Merged-chr1-177483786-4	13.3004219617623	0	1.28544374651936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32489242-2	5.20007624215505	0	1.35528564689255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68131422-4	8.68276255069998	0	1.30781708045694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19468508-4	12.1859235797014	0	1.29427887186563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51071513-4	8.42222819120573	0	1.29492420231439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88906915-4	9.90531138556166	0	1.29066721265399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101665462-4	7.17708994618972	0	1.29201530123376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106693153-4	10.4626024629482	0	1.29188789324111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16877057-7	23.6072673893431	-0.275866923641537	0.416744218655716	-0.661957410066528	0.50799851710323	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02374324319953	4.44647233205409
Merged-chr10-78429431-3	11.2645053979043	0	1.32533404718479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9993170-8	33.0700128355371	0.411376536620206	0.265076285812417	1.55191753709466	0.120681956151081	0.713414429767373	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72228436697779	5.00578018507258
Merged-chr4-137610468-8	36.9085258210483	0.523411357201154	0.265576150780626	1.97085226087755	0.0487407769679008	0.364084912179292	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19157261153076	5.66306493637298
Merged-chr12-117566461-7	42.6958534057533	-1.35623606245024	0.311824955593009	-4.34935061522268	1.36541258261853e-05	0.000648903640900296	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42795369037078	3.865236173923
Merged-chr11-37077446-4	13.6296497646211	-0.478528533076995	0.625818622087751	-0.764644125610402	0.444483486079817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6785417103669	1.80087394175037
Merged-chr8-14651614-7	62.4237833658876	-3.0402580389198	0.290729054517684	-10.4573588077172	1.35582375443017e-25	8.85976590569941e-21	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.07154064587698	3.22873116108039
Merged-chr12-73632929-4	9.01472793581801	0	1.29468103778249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153356988-3	9.21033336463245	0	1.29558514178833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120916662-3	7.58434552403566	0	1.31217004167373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45906829-3	8.81902781359148	0	1.28711876841793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60527028-7	32.0087039114849	-1.58922895245829	0.347654819319853	-4.57128411326911	4.84744524091605e-06	0.000282823353985704	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38652357208323	3.79304203564856
Merged-chr6-51551626-4	18.2493849119335	0	1.28270417972134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115311462-4	8.88533948749792	0	1.31394017075352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37538531-6	38.3372671427145	-1.35018775437509	0.759738246426494	-1.77717491613175	0.075539465165098	0.503796886168452	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22206051201418	0.989878296978726
Merged-chr1-39922892-4	10.1407649708592	0	1.30080881449361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9706696-4	12.6471294583832	-1.0688534681516	0.579164546604453	-1.84550914661146	0.0649635092005221	0.449645744329766	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82299754972793	1.80880889089274
Merged-chr16-84955652-4	7.59329115085437	0	1.29969152910433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98698884-4	7.32043308971305	0	1.30998916464509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7828878-4	8.46895176311676	0	1.36675803663593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133662514-3	13.9121289274068	0.0275812198746282	0.52525152988612	0.052510498885378	0.958121929976568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03867031117284	4.79508156474903
Merged-chr13-89339992-4	14.6057869998076	0	1.30063211745869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16052025-5	21.0463385083354	1.21339532639204	0.417515582016684	2.90622764432191	0.00365815204689143	0.0512937301312985	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94404189962001	4.05283358615251
Merged-chr7-35122888-1	3.52212962388975	0	1.36089300215752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146818919-8	36.0761883242885	-1.27862188460811	0.299223654808423	-4.27313103112366	1.92747111560183e-05	0.00085565575760949	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81770640560288	4.47033268585175
Merged-chr14-10535043-1	3.3647052524023	0	1.35170485939858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108790681-3	8.50431222502206	-0.126824739441514	0.774630625965485	-0.163722857308207	0.869949322819706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60830885254157	1.60230598860646
Merged-chr4-8898206-2	4.13222742446826	-2.1030497941785	1.26858079580841	-1.65779728112495	0.0973583902969477	0.608060441428777	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25221160159353	0
Merged-chr7-16913943-4	7.52901012904143	0	1.29457404687587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20414230-2	3.23574206973377	0	1.37266891816268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4348798-4	7.07563135121914	0	1.29719579305182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10972182-2	3.41102292429522	0	1.41004262405444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52221771-2	5.85872752077191	0	1.31100053074775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35689100-2	4.01861516368815	0	1.35693698957713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55205269-4	7.43267029677501	0	1.30362283090717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117909347-7	33.4448465912228	-0.0518720241678446	0.322612086056368	-0.16078760347119	0.872260689193962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71384016299996	4.6928461363828
Merged-chrX-167315981-4	9.01565369459914	0	1.29991188485471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41333122-4	7.57831317113591	0	1.29960137632701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7958850-4	9.6158782932378	0	1.33733220319657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33991978-8	44.6073978521351	0.221412676244944	0.303181932550064	0.730296407779453	0.465209023520868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65206728805339	5.79774669021829
Merged-chr3-152262164-4	8.0021047178346	0	1.2984027397773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113001045-4	9.29081319364674	0	1.2884718035744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30444747-7	29.1138868179586	0.503416353693231	0.446194228820535	1.12824487897111	0.259216515246606	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77428767508444	3.92486636045365
Merged-chr6-125254297-4	12.3315369679244	0	1.29049997635348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48699093-7	28.464971321623	-0.024388275203472	0.336884271428172	-0.0723936297176518	0.942288654243571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32307800911008	4.31675359186504
Merged-chr17-42457667-4	13.2171970716417	-0.4915739590385	0.67489610379603	-0.728369827998096	0.466387227789792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6402779006222	1.05916644618774
Merged-chr13-63696614-2	4.45057768485831	0	1.31431887920363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29673392-2	6.53927776968114	0	1.30398536411099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81072484-4	8.7259055629536	0	1.30187920924803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57836246-3	8.10488378683579	0	1.32478375424637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173679404-3	9.66561486835306	0	1.31485171694207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41102710-1	6.09314607308994	1.01335929443283	0.772882858339549	1.31114215239541	0.189809741830735	0.981196692482492	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23309987336437	2.6052381318096
Merged-chr13-100576122-3	9.29920937829985	0	1.29316439932225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19745990-1	3.71145125347237	0	1.3460909062207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83853222-3	16.5745216065573	0	1.32595215149283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14677220-3	8.19569693516694	0	1.32368357832044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75432943-3	11.45485796241	3.4225970504065	0.765268558781515	4.47241299950448	7.7341870123062e-06	0.000412233429450376	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.787356202195084	3.43418911065378
Merged-chr10-128149801-4	13.0095282616799	0	1.29819039222731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11589367-4	11.2647379634239	0	1.29357224221704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94502349-4	12.2119941201415	0	1.30882065383219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169958687-10	55.853047424746	-0.525542982679425	0.413133772323105	-1.27208913404544	0.203341451439865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73663224576346	3.09703810615165
Merged-chr1-88576343-4	8.74904624297375	0	1.29258253767435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73003255-4	9.88899309888893	0	1.28772598571937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81348444-4	18.4128205811005	0	1.29182483867831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63410699-4	9.83016393239079	0	1.31429893606379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115019581-4	18.2955934215296	1.7191787401783	0.524929871581797	3.2750636480218	0.00105638170178622	0.0198420001968734	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79165838691278	3.7510669118949
Merged-chr6-134211484-2	3.29755159265574	0	1.42085766964502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100439450-6	12.7628372265544	0	1.28667907003359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97482107-6	25.8967125814605	-1.31134499509999	0.492006812526334	-2.66529845057745	0.00769200242676124	0.0901599265612807	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03208238963269	2.41606101293691
Merged-chr17-67233223-4	11.902938982922	-2.84962073379183	0.666259350253472	-4.27704426618212	1.89391153628092e-05	0.0008413293218886	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60020694543589	1.40000983364339
Merged-chr13-63718988-1	7.25017820707883	-1.68803844325797	0.979531354373999	-1.72331231228097	0.0848320624256187	0.547662117295444	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7051848655293	0.581381506691384
Merged-chr9-115548115-1	6.52564220266701	2.51732273934276	1.08331536241036	2.32372107577405	0.0201404481320593	0.188229079467612	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	1.57215779683075
Merged-chr15-85089664-4	10.3541460749547	0	1.28586785034095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120885398-4	10.8085855164984	1.92991875714443	1.25203232938515	1.54142885279342	0.12321244633713	0.723083796268212	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr8-61875522-4	8.76941666265361	0	1.29484861740614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83675926-3	8.85745229380478	0	1.29095130894134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68873307-4	14.1898476734938	0	1.28333085609959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90761450-2	4.38908369468339	0	2.09604620141435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106551247-11	68.5743290428321	0.506367496101675	0.284426514850308	1.78031044808946	0.0750251681796111	0.501031644339792	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.65868302484018	7.15684906894657
Merged-chr9-40628474-8	78.7811451567169	-1.66167174473719	0.20943266008663	-7.93415766218054	2.11928735702099e-15	3.46217379079734e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.67174984007107	5.9820609010891
Merged-chr4-117146398-4	8.14988482553588	0	1.29591842384047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78745713-4	7.09388568494842	0	1.291196960249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85376542-4	16.7905604841806	0.82214404806127	0.517613133033957	1.58833691726932	0.112210173780626	0.676179086671781	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28583184904804	3.56807384835358
Merged-chr1-131978330-1	2.40835180138218	0	1.45703009626875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29512740-1	1.65808294139339	0	1.70642653903749	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3032291-4	20.7149811818897	0	1.31643256532966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76071056-3	11.633640876559	0	1.29073306395499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102753549-4	8.47316593203896	0	1.31428346681313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25242454-2	11.9253685574415	0	1.34988602884344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15959115-2	6.94219704193613	1.32509007936631	0.882359580894928	1.5017574558689	0.133159759379412	0.763084945751736	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54411791597332	3.52643598000085
Merged-chr5-45384452-3	4.66141762626524	0	1.39746583319553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34112488-1	2.04011151933758	0	1.35880854489132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98123266-1	2.57814428544965	0	1.34757725078232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143992800-2	9.71651069863068	0	1.28753169228775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9530519-1	4.2233739446327	-2.05233829904346	1.05695993851402	-1.9417370746604	0.0521689380249366	0.382255316872285	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14061661300376	1.21653520045322
Merged-chr6-5112603-1	2.3143707328373	0	1.40693985625817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114826877-3	8.49698061137931	0	1.35557420116733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39614578-3	8.26807931492809	0	1.28992427498622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125332988-4	10.7305217209554	3.92576969512917	0.989185170096637	3.96869040681801	7.2268699890879e-05	0.00245450647768679	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.32843128278891
Merged-chr6-57721910-2	2.76566955422131	0	1.50555942461788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170345689-4	10.143639698133	0	1.29255325246478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100883373-4	11.345392912661	0	1.29252461489063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84238383-3	5.73974091594042	0	1.30672436796708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120258966-3	5.2204328429704	-2.70669302463077	0.807449905500143	-3.35214978191646	0.000801866232616037	0.0160093953059968	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63729764081281	0.773587911294612
Merged-chr19-3882426-4	8.90553283116149	0	1.29014143029123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64277151-3	7.13861067229924	0	1.36526245152579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61558437-3	5.43746686464901	0	1.31616083675812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59643096-4	7.57641755148464	0	1.28888204271832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180303815-4	23.6953115360548	0	1.31415378253926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65694925-3	6.36221129204126	2.45294988624523	1.242440338386	1.97429994057642	0.0483476476639904	0.36226641259616	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr7-112000316-3	8.23514623362974	0	1.31421502245116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84388838-1	4.26695925852843	0	1.31987443551064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110389047-3	8.11221041622385	0	1.29848658235986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90085555-6	25.5404395270956	-1.09835559612725	0.407762439567442	-2.69361640393459	0.00706814595523888	0.0846545208194721	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95566977026554	3.89003773342591
Merged-chr4-154942822-9	46.0926609153469	-1.20819784889773	0.303798519823988	-3.97697082131186	6.97987258445328e-05	0.00239049661375097	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47739441396715	5.14787901321471
Merged-chr4-11022974-4	7.19050801293427	0	1.32562963294154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54999158-6	24.013178046222	-1.39237979061805	0.469079337534201	-2.96832471440192	0.00299427828145979	0.0443076976537123	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03941152147881	2.72065437544902
Merged-chr4-43005912-3	8.74039930679628	0	1.30938147448779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144772196-4	7.93983331560111	0	1.28702093525927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-69985361-8	31.0489277277532	-0.345755169609652	0.29315366330784	-1.17943322184098	0.238225712841639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96240762127024	4.53357066302157
Merged-chr7-122939331-4	6.19760475218356	0	1.31391778291383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62516357-4	9.46544466968628	0	1.29591011002745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103262572-4	11.2383453467342	0	1.29805423836676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62558384-2	6.10639204578241	0	1.31492345876279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49754945-2	4.59729239121372	0	1.32463344287657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132382480-4	8.91080057545602	0	1.29276184635704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32944163-4	10.3181913643547	0	1.28998493484013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4334479-4	11.748971231439	0	1.29776160141722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65931689-4	14.1542651739787	-1.53809744821866	0.489339838687568	-3.14320912914817	0.00167106404355622	0.0281901028210305	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78358335099785	3.30765547621154
Merged-chr6-108566706-5	25.603966995921	-0.101325372447757	0.411526543095385	-0.246218316042549	0.805513237770786	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57639943026093	2.1986655900168
Merged-chr2-79653731-8	48.5378445840711	0.638340060193679	0.443096309131055	1.44063502006034	0.149687821367453	0.828168688093943	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4361740265737	4.35642168220476
Merged-chr9-62058219-4	10.1225205297338	0	1.30316473470815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73146934-4	7.9220439726825	0	1.29194971460283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11088793-3	5.49680861266348	0	1.31304049587461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77197303-3	12.5889136853054	0	1.285243490072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66114317-4	8.18257281949379	-0.417532871037732	1.2777776155292	-0.32676489708642	0.743845711281466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr7-99146169-6	50.6525673041372	0.822343397925692	0.421808299661512	1.94956665998653	0.0512277904115364	0.377374817383983	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57984997894704	3.83009140821405
Merged-chr11-113450299-2	11.5657730268029	2.42030260150884	0.53754422572365	4.50251809188461	6.71530363121619e-06	0.000369716270065595	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5721219882921	4.99574130046942
Merged-chr8-92881431-9	44.3278789059034	-0.95650001540564	0.324643308715017	-2.9463105806542	0.00321589317897279	0.0467406040198301	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29491674234889	4.32980249562079
Merged-chr8-64615653-4	11.24946692837	-2.36943397971607	0.86307939750299	-2.74532561728524	0.00604508849485751	0.0752566875185671	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78877724284026	1.29684500016202
Merged-chr3-145964189-4	14.5858998188585	0	1.301144330728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44076952-4	6.00426414692155	0	1.30024072810004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17804765-4	8.45367178113816	0	1.2906531369774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87330901-11	74.6955851284865	0.0990922292185756	0.214197188425482	0.462621521538081	0.643635679499802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9326233216192	7.00628142298018
Merged-chr9-83400955-3	10.1342118487132	0	1.31103768157581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46140053-4	9.53219484537863	0	1.28755364142546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115510485-4	9.42810334887867	0	1.3017461152085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73067623-7	35.312472182032	-1.813252019246	0.38349375943755	-4.72824387522081	2.26470070879215e-06	0.000153994934980991	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11004077269502	3.14748759870119
Merged-chr2-30545210-8	31.5335015547948	-0.425552635233325	0.300086568644812	-1.41809957424991	0.156161695558681	0.85315125474271	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91447151063546	4.4965071632283
Merged-chr19-46319279-2	3.10643265256837	0	1.34431930583217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36375292-4	8.16437134801672	0	1.37413530836425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26363242-2	4.99751796232266	-2.66761088645754	0.898152879248477	-2.97010781582044	0.00297695248413923	0.0441989447476128	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52103030550981	1.03956264035389
Merged-chr16-38679068-4	11.9914862652436	0	1.34238488482451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17629940-5	20.3340960537821	0.128313708672522	0.520588143184325	0.24647835405481	0.805311958627947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83266066874334	3.08508095974447
Merged-chr15-28365347-2	3.28972975505215	0	1.38314384757169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108895828-2	4.77944040226766	0	1.31835107140564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81230322-4	10.5092259916749	0	1.30838238469708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6522957-4	16.4287591239493	0	1.28041450498268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34236953-3	8.74472608499708	0	1.2952626546179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37877852-4	8.54570343891745	0	1.29775608302038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120324806-2	6.69207227651028	0	1.2999522818206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126725870-4	8.00441556320702	0	1.30048920130454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104118599-2	12.5340643156226	-2.08191381987602	0.542652775441325	-3.83654873631275	0.000124775443503136	0.00377133855847929	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48022925407799	2.37183764083286
Merged-chr4-33265300-7	44.4248794176381	-1.45349277786319	0.292772805676157	-4.9645757723514	6.88514018108749e-07	5.9908970742123e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87377429244702	4.20584208015607
Merged-chr17-7877569-4	7.76829555762995	0	1.29930254441423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31067265-6	27.0575177943099	-1.18284321425727	0.333290730264244	-3.54898323550575	0.000386721700370266	0.00903816746509134	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04589849736558	3.75517949855069
Merged-chr3-96256105-4	8.4325330491509	0	1.29902898200903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93261444-7	43.3293483635449	-0.478253458459876	0.319070488912994	-1.49889593390221	0.133900631398741	0.765517992946818	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98684744336378	4.34752461083257
Merged-chr3-83863560-5	25.047140798374	-0.552999415601996	0.345376493400141	-1.60114954598635	0.109343800634068	0.663691030775547	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86003414495144	4.14860068623511
Merged-chr17-74802949-5	50.8108956590043	0.0228112313298846	0.346873664504016	0.0657623615286613	0.947567022488423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79480163959997	3.80525618608572
Merged-chr14-16240195-4	8.80490306559983	0	1.29381301834409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3698188-4	10.2276493881081	0	1.30067563900498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53248281-4	10.283806860954	0	1.29320847740277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66710751-4	8.88924690322713	0.470062507583507	0.85254843302635	0.551361646299547	0.581385787030626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00572841130107	1.20539659680455
Merged-chr3-107778209-7	44.4731949534029	-1.07143492320454	0.335186096733063	-3.19653748663034	0.00139087752091919	0.0244636920647702	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0656042245056	3.97076838366078
Merged-chr1-157549871-8	36.9325019972087	0.112130804799713	0.2799078743461	0.400598965147604	0.688715407691743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10820102173063	5.18860771740617
Merged-chr11-3167431-3	13.2657717956895	0	1.29272983391128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74380533-4	9.85763220240467	0	1.29003434705017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32249918-2	6.57738562311356	0	1.30196442070565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-150935231-1	3.62842407092104	0	1.38958990856631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35064446-4	12.9843282198481	0	1.29329942762729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168005813-3	4.63940619341295	0	1.33377775261463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55951789-2	4.72336589475326	0	1.31238990845272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156735876-6	24.9887956133945	-1.84787327042774	0.399032962643648	-4.63087875794854	3.64117050222241e-06	0.000225800830970109	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44102801603073	3.54238871291771
Merged-chr17-71286155-5	35.7997999225443	0.323992099970264	0.389841490198176	0.831086757352489	0.405924620195298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79571236322746	4.04575952826687
Merged-chr9-58266629-4	11.2566863124999	0	1.28131542361796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33915189-4	9.43052387425347	0	1.29940339438219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60663213-4	11.6083390135669	1.06483926757966	0.794785544869032	1.33978187506559	0.180316269914597	0.945609117731688	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.978098551278648	1.64536602019594
Merged-chr4-46560540-5	28.0822251951789	0.50302248606711	0.471241663668911	1.06744060393719	0.285772921371995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13625149093544	2.22007058875543
Merged-chr1-34463028-3	10.7131243426876	0	1.29382105286322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8971798-8	36.7278708247933	-0.0643454292798224	0.365375420905509	-0.1761077116801	0.86020932256938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49046528606669	4.42258187673237
Merged-chr1-64446211-4	7.16651841957074	0	1.29788270833786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55434053-4	12.5150907850124	0	1.29050807079143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45554921-4	8.14351859235026	0	1.29575980444888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-29338850-4	11.1017172052788	0	1.28705279340944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161487356-3	12.0249230606856	-3.03081632025972	0.831309359686491	-3.64583447178163	0.000266525502883065	0.00680061519382926	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93834143310471	0.666688015277142
Merged-chr11-44417486-10	91.1742308492321	-0.470735274257156	0.181047613015241	-2.60006341104055	0.00932065356900824	0.105065970005246	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.90265667189968	6.45961856306453
Merged-chr13-113918205-4	7.12882015665327	0	1.34059304109003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83436722-4	5.66901811180322	0	1.3206819124923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137852454-4	8.76838758673399	0	1.32063248496152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37486472-2	5.90761285861692	0.312424627904523	0.693318305322756	0.450622211336367	0.652261855482313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62830972346243	2.35651348678689
Merged-chr1-172191716-3	5.56686955866831	0	1.3119678300733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42883141-7	19.4976095558125	1.4534933584293	0.346563814974378	4.19401361488578	2.74061521585274e-05	0.00112847033330254	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43051458957092	4.7705238650475
Merged-chr5-77174957-4	9.51884066652035	0	1.32253689823809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3179807-3	13.6037390959944	0	1.31917548051536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3162427-6	26.292929871131	0	1.29000123096287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25062108-4	9.82417732210324	0	1.29341825376697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114195002-4	8.43192715489734	0	1.29759733333255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-162510642-3	9.45770675884266	0	1.29000203191559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70692503-2	5.31516736661383	0	1.33696586542795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9796226-2	5.96560246695322	0	1.31806146825358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49454793-4	10.2844174804444	0	1.29484221212951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104186471-8	113.342603167897	-1.14493935247016	0.280501416012316	-4.0817596172844	4.46960127761646e-05	0.00167042829888784	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35077772106066	4.33579404716024
Merged-chr4-132809848-4	9.13682871255699	0	1.30316321056987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77196976-4	7.99683168767575	0	1.28741435205229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123343642-4	9.78553515016274	0	1.30241597689298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83265787-3	9.54196593627529	0.0327591864440774	0.505638898427119	0.0647877102532672	0.948343026689204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99698732450127	4.1758356820034
Merged-chr13-95791129-1	6.32413272106278	-0.413936589068977	0.86168455863122	-0.48038065081091	0.630956750274066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8935855983363	1.29606516661881
Merged-chr19-37689659-3	8.52418440305763	0	1.2992816446286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103389607-4	7.65644236993266	0	1.2868402750671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127086385-8	33.767552661386	1.00130717947081	0.273927950033667	3.65536696546569	0.000256814358375422	0.00662526295396775	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27927124695796	5.31334721363806
Merged-chr15-53196491-4	10.6232001242506	0	1.29923000746228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119976883-14	76.2620795437813	-0.569885900895718	0.281550855823921	-2.02409578627642	0.0429602970996912	0.332734807902859	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30906565745749	5.75355088210728
Merged-chr16-25042152-4	9.44230529035765	0	1.31275077034808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79955054-4	6.91351861173678	0	1.33641244556157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96655669-4	9.22558732589835	0	1.31500309891072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65515891-3	10.466109411527	0.851141266358015	0.48906241159391	1.74035306370009	0.081797041786702	0.533838760653223	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16956830171975	4.89958829575438
Merged-chr4-132586311-1	3.13634338811787	0	1.36065922287939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124037101-4	10.1634762629934	0	1.28521968977156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80024353-1	2.83796435365578	0	1.35748130649108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9837145-2	4.64995346676525	0	1.34719157730097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24600969-8	41.5515257875231	-1.07568952332735	0.295883710713241	-3.63551450917778	0.000277426377970255	0.00701032640945256	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5874315955087	4.57593655783624
Merged-chr1-171711662-2	3.08382942368783	0	1.39087684492386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6554814-4	12.6092731618354	0	1.28267606575805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7800237-1	3.77590357223841	0	1.4003873974705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119070013-2	3.90254956894284	0	1.35090120253175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11395043-7	22.4889196472227	0	1.2813996733306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32816944-1	1.66418374118361	0	1.51473191522213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100101314-2	3.63717369597842	0	1.34195220854566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9484671-2	10.1119250314912	0.852298635182528	0.724950470642866	1.17566464151231	0.239728913328183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89756716143109	2.08939397228322
Merged-chr4-53337777-2	3.5982139369107	0	1.34690601070809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-14443551-2	4.82750879990061	0	1.39323191141074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44401855-1	3.19103134026288	0	1.35961716157224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129331456-2	3.23939063892396	-3.15637154078089	1.25501352649527	-2.51500997729905	0.0119029015244767	0.126554995609901	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89023037171817	0
Merged-chr7-47013132-1	1.71518087285267	0	1.46001024308463	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55542710-2	2.38263515006008	0	1.41674041266291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80612166-2	6.94919609741402	0.329632858700217	0.771423804772996	0.427304494184253	0.669157559844381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46159083012986	1.47711801254374
Merged-chr13-80935839-1	2.69127846986379	0	1.33916400384849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41324002-4	10.780669309766	0	1.29037508991081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21368949-15	91.3019436706389	1.01316503421474	0.228609957512698	4.4318499738073	9.34280173634595e-06	0.000478085138812265	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5565841173988	6.55260311973993
Merged-chr2-11766715-3	11.0124626995902	0	1.29311844941036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110978590-3	7.40955783847251	0	1.31476906484672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29765291-4	8.62318799236639	0	1.35969669814122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100378667-4	11.1863017260721	0	1.28721894464506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34297227-4	11.5738229145665	0	1.28423332238762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53653915-4	9.02540328275563	0	1.28898122499837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77610301-4	14.255384678636	0	1.28762462062801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128209901-4	12.1789079998566	0	1.30958253767182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73546682-3	5.95881343275331	0	1.31449091856453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157008182-9	61.8813909789207	-1.0244369621269	0.215951343337646	-4.74383232025174	2.09712459190153e-06	0.000145476330766876	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.8720748985421	5.77793485454222
Merged-chr1-171762990-8	32.693672987038	-4.53380925041212	0.780945507938803	-5.80553854823812	6.41594408332877e-09	1.22949056325279e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16890880366284	0.961728545204858
Merged-chr7-127921704-4	7.70255991445081	0	1.29826714718596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74522575-4	17.7037966581434	1.31619932451978	1.30027322139517	1.01224827433385	0.311419359830506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr16-24194090-2	4.54896173121333	0	1.31095950697752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70595722-6	24.8782951754458	0	1.2838253633242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167988444-4	10.9717942116413	0	1.29947683612092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76522158-4	9.43543769471184	0	1.29196239463246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169934579-4	10.5375926637682	0	1.28663640450961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12367614-3	6.57663539882026	0	1.34791978192498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88191295-4	7.84670394126879	0	1.30182437879829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114789366-6	18.923992750859	0	1.28090201132709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71836150-4	5.15777684756987	0	1.36842715402413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31040739-4	9.43035859934406	0	1.29927492621649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58999276-4	7.93094971579664	0	1.30890766801748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-57305179-4	10.6690770027965	0	1.28903486041457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84131635-4	11.4989727377179	0	1.29772814875981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21890535-7	41.0391478148376	2.26405201170946	0.343098310937528	6.59884336219219	4.14377829156921e-11	1.6976274702914e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.161723109532	5.41838471789459
Merged-chr10-40832412-3	8.60414339204433	0	1.31348080588902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36713538-7	45.1887663420483	1.53957751832355	0.315604675831923	4.87818348782469	1.07067301989063e-06	8.48050898882097e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.471474625186	4.99209020645313
Merged-chr18-34886153-4	9.33701319221868	0	1.29013830230163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43549956-4	9.58582826103242	2.46679420527948	1.17374602465759	2.10164222366512	0.0355846282004216	0.290627810821741	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-77974899-3	8.63656209699164	0	1.30088732322462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8643480-2	5.14280583982662	0	1.32038524177293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128268126-4	8.223598784794	0	1.29776351059967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84621438-13	134.034317824224	-0.386318475125765	0.203478186777029	-1.89857439386902	0.0576204577866161	0.412135117614297	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.09961577401525	6.70770663431511
Merged-chr10-20005668-4	8.13089489234674	0	1.30415189889093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102657440-4	10.3216966656677	3.16358382961155	1.08155953039427	2.92502052888231	0.0034443350036734	0.0491641579620013	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.900948542443349
Merged-chr5-139285515-4	9.00492282083877	0	1.28904267218902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114164497-4	9.88529532954556	0	1.29961200207816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69570490-2	6.18020064167054	0	1.31463066905059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53781011-4	11.2033363557789	0	1.28884162897049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90482873-9	49.5381632664815	-0.186264764313132	0.19943243628572	-0.933974271097388	0.350317165008771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19202885705489	6.02519948046114
Merged-chr6-15729433-3	6.09512722568452	0	1.31683836612405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126515194-3	10.5972718165353	0	1.29468113796417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-88810269-3	7.31579777224977	0	1.33020766618091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86610425-4	9.07545627641692	0	1.2946455961558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136429821-4	13.3498522779061	0	1.30211786154476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170311153-4	8.13340166387633	0	1.29213370354523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-137405396-2	4.83652058151951	0	1.33570352782704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119178483-7	44.0433975896615	-1.03861903617044	0.371625963836646	-2.7947967506032	0.00519323539099458	0.0671329693095809	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31660346489023	3.44691177262104
Merged-chr19-32494819-4	15.3693008975374	0	1.28873529794062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6334977-4	15.5027468949106	0	1.30677746580047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80786945-4	10.877548929776	-0.408446125532342	1.29494900699609	-0.315414833576977	0.752446705657945	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr18-67973921-4	11.9393608878032	0	1.31698745138082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21477276-3	8.07859532766885	0	1.30343004871672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95941925-1	2.6319963293047	0	1.3416136100012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145802648-2	11.1275633541911	0	1.29505941474559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75612188-1	5.35331608269389	-1.91111896536739	0.824895399778836	-2.31680157978791	0.0205145429501189	0.190960587410038	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01802665222431	1.04220233489076
Merged-chr6-66962716-3	6.6259572270008	0	1.2993668166824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36231422-1	2.66672856001408	0	1.33584075310117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47281090-3	9.78125203047006	0.174078651339398	0.92343099975426	0.188512895263126	0.850474607777215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14997046426002	1.48219169541115
Merged-chr8-39742605-1	4.58204775782041	-2.52315721030309	1.12977670789846	-2.233323799883	0.0255275991391888	0.226064032165528	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13075094236442	0.423054662900563
Merged-chr2-117197238-3	6.47259172537068	0	1.32365986764912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112688540-4	12.1639812009958	0	1.28716708189336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98933363-4	11.5691025765995	0	1.29410747115081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78489112-3	13.7206713274697	0	1.28595214820111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103785940-8	24.9653666245261	0.100164634131253	0.318778883898836	0.314213516611221	0.753358877427565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79393220182698	4.98767826862148
Merged-chr6-97856448-9	26.8052874043081	0.107505495912137	0.337929024243454	0.318130400763349	0.750386024133035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15065235549914	3.92650677464113
Merged-chr7-25784289-2	6.82145721209215	0	1.32194021390532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27612190-4	9.5094898417809	1.31872905811432	1.28972965499672	1.02248486960446	0.306551470208605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr8-117303796-4	7.51629014622471	0	1.29427580328318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27373617-3	10.2128474290838	0	1.34358913104101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58712438-7	24.5589022516967	0.406138969705275	0.303355383515866	1.33882235745466	0.180628510584407	0.94691942660639	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60017510178711	5.04904914919853
Merged-chr18-62095721-4	8.63292519319854	0	1.28374268167134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138686062-8	32.9303158869837	-0.565262628110939	0.363951011103143	-1.55312833559005	0.120392477852043	0.712089686614738	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37851950895947	4.70484431977805
Merged-chr1-144312757-4	7.09718650586835	0	1.29340699275412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66175948-2	4.01190607530442	0	1.33992365702737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9880241-2	7.43253729880947	-1.30295915923173	0.729785963067818	-1.78539904187038	0.0741966139603427	0.497355922640979	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04679968191583	1.94985701881947
Merged-chr17-81552005-4	10.9737268823024	0	1.29018278603454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5150904-3	5.39927536019552	0	1.39880968728466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82688929-3	6.17299772620947	0	1.32754457749554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142949762-3	6.40308234920859	0	1.39838501133032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11144119-3	26.8660448383835	0	1.42441378646806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111182273-4	8.77206876973202	0	1.30753106906453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119524687-8	29.7870671327009	1.15476121217531	0.319637161562547	3.61272514913552	0.000302995820366705	0.00753121524445899	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32528675201596	5.43409950361141
Merged-chr14-21303020-3	13.4721315371925	-1.95014615381999	0.50419768306574	-3.86782053809185	0.000109812431428713	0.00341217458114154	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90042787312422	2.88900786427689
Merged-chr13-4650405-4	7.66667614851521	0	1.30497246596259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47561055-4	6.88278389448292	0	1.32601255665414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104041217-4	13.0775241556839	0	1.31235573850681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96026826-2	4.38011569746336	0	1.33622604655709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84881720-4	16.0605301611053	0	1.29718827823394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3381994-4	7.06797425381197	0	1.30192344143684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141488368-2	4.63630547696987	0	1.34151525846736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123531073-4	14.8830386544199	0	1.31198172507649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139219259-8	33.5427915511941	0.406582661224108	0.262035574764537	1.55163153548697	0.120750413025639	0.713625439954186	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00958962658753	5.39556554266315
Merged-chr4-118107411-6	26.7792603060111	0.137116363478509	0.322975149851464	0.424541527549624	0.671170926253421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62367330939109	5.71699832634308
Merged-chr2-167717612-7	37.6418661712833	0	1.27781150066422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72402066-4	9.89886241625619	0	1.29035753475095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128782408-3	10.1535575592419	2.52765980380073	1.09625849934466	2.30571512586836	0.021126555366627	0.195373693470775	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.735627456805112
Merged-chr3-27611330-4	7.86154232800997	0	1.33381339043137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-39881285-3	7.03815042239856	0	1.29780830999846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87910894-6	27.5710813129009	0	1.28109192063212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36713282-6	30.6422074263194	2.96333609898889	0.755866635653491	3.92044834261921	8.83843810185622e-05	0.00286770891858936	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	2.45514567258509
Merged-chr10-12035327-2	4.09263667570973	0	1.35507774114204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39303912-1	4.91619627615494	-1.30531130633744	0.65219531712477	-2.00141165087164	0.0453480461365165	0.345334276056031	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14891507129082	2.4731063392741
Merged-chr6-125515706-6	28.9163620085953	0.682923958091153	0.380910652869508	1.79287177438198	0.0729934295172479	0.491076767758064	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01660847445029	5.65550626783519
Merged-chr3-65973521-4	8.11318906722762	0	1.2907679359417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60835124-4	8.0598931949548	0	1.30065127978513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40933371-6	15.1087753425354	0	1.29921985190149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97018206-6	24.9781051288058	-0.30161439020798	0.388072798182866	-0.777210852242869	0.437034380572967	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95760185791539	3.60154920368109
Merged-chr7-114509650-4	11.17344466883	-3.03834295090407	0.726882429198996	-4.17996477676897	2.91554252057231e-05	0.00118408353977202	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52679772076383	1.60308582214967
Merged-chr4-58304049-2	5.25728784719892	0	1.33258702277395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103363338-4	8.61648854229343	0	1.30069706408186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137879529-4	10.2192067623696	-0.450813661000352	0.632819752251745	-0.712388732172525	0.476224091065405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56943613598716	1.88903407179563
Merged-chr6-83613473-8	30.3833080160114	-0.899010749270667	0.273030044206497	-3.2927172974075	0.000992241895265631	0.0189200580356078	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76025919851359	4.87046798316499
Merged-chr9-62913665-6	15.5689460094481	0	1.28674875303843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35297582-8	33.1456662116083	0.0219409505944894	0.314186424953331	0.0698341775834155	0.944325643794642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3062847660774	4.42384184848246
Merged-chr16-35776443-5	16.4479674140251	0.366709056244161	0.428704760846696	0.855388345862795	0.392336193233471	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06515348730777	4.57247888360727
Merged-chr12-85604540-4	8.49468919894862	0	1.30648934558965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-97115724-3	7.39347169783129	0	1.28973454737451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11809669-4	12.9173892578265	-2.3715710543279	0.540722724623288	-4.3859282148353	1.15492208220142e-05	0.000569151873178987	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62361505359935	1.57215779683075
Merged-chr1-85986947-4	8.7888188832124	0	1.30041486138938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71444962-4	9.23008184006456	0	1.30345804349583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16255607-4	9.57139454660552	-0.756419041155898	0.761273863995011	-0.993622764331306	0.3204065572065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91925180201757	0.735627456805112
Merged-chr10-39378192-4	8.28962068949029	0	1.32615875104054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75901598-8	46.2851825223478	0.990989235698403	0.329599448435157	3.00664713003415	0.00264146191468621	0.04027274154855	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68473473201367	4.69577719341849
Merged-chr8-115568562-4	8.42879640874566	0	1.28975665130048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23021825-4	12.9530441240296	0	1.30171690975677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110430014-6	20.1642271045303	0	1.28326570465659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149843142-7	33.7806042021639	-0.350168003749695	0.32329469538419	-1.08312325797233	0.278753716848938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42679974949263	4.26917368561318
Merged-chr8-34744884-6	34.746323180325	-0.612836115606935	0.458868485767997	-1.33553759871142	0.181700458057051	0.950708474032835	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96585222993311	3.34692646643635
Merged-chr19-21784428-1	2.3334122967268	0	1.53494178800299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163243015-2	4.01778018353057	0	1.33006846708068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99401405-1	1.66474340368294	0	1.43026333500351	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78634193-1	1.32966628729637	0	2.43325103614283	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41038680-2	5.4370570980325	0	1.35511068412424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65550387-3	9.8438246111353	0	1.33322767657217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136218114-4	12.0210633099262	0	1.30194141877968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60290630-1	2.28278155143961	0	1.39472241291343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38942331-1	2.83118074492546	1.75476838845114	1.14520519753164	1.5322742092276	0.125454782681072	0.732484652347866	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.982587073406392	2.22281280114811
Merged-chr13-36086760-1	2.04669193269643	0	1.64902270702882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25319232-1	4.07803781041438	-0.581311164748291	1.23925145733332	-0.469082494362511	0.639010671330484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	0.306240821987646
Merged-chr5-66232568-1	1.55647069929037	0	1.55933257421093	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-54780932-2	3.63096119706155	0	1.34428441978023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8569891-4	9.59199173305001	0	1.29277668652091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96524025-1	1.1763181737836	0	1.8598720710567	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33400622-1	2.28011659542035	0	1.41379834896998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96273745-2	3.64615661903289	0	1.38759604546803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67343226-5	52.49408779101	3.10026098629116	0.683486199486275	4.5359525746407	5.73440661306675e-06	0.000322756705027959	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	3.34985657602134
Merged-chr16-93778618-2	5.43927910795132	0	1.31429246387915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72281781-2	4.84036472525033	0	1.34589557611945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42180180-1	2.30511001761668	0	1.36285141080259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121249932-7	27.5076274971073	0.26974328970791	0.282201410626517	0.955853796439399	0.339146104756803	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79052693748247	4.97152659779
Merged-chr16-84583557-11	92.3930026925258	-0.987538766324749	0.276050986888123	-3.5773781411076	0.000347057927448112	0.0083511867826161	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.08936091841789	4.97096341446122
Merged-chr6-17643021-4	7.67804270560012	0	1.29351468430827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167131446-4	12.7719090004196	0	1.29430833143762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94630282-4	6.29567379925045	0	1.30850094596305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45600704-2	4.49671812971914	0	1.32318131070016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28522696-3	6.93441496488271	0	1.29473765496664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11950080-7	30.9923436074598	0.24126403029759	0.294830692111418	0.818313821297867	0.413178016036356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22449538275131	5.39340487805394
Merged-chr2-122452748-5	16.117722056982	-0.181716341747233	0.461809237317075	-0.393487888641924	0.693959167547387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25962868130567	3.38731784117909
Merged-chr8-31031833-4	9.73165485793666	0	1.29153958373599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25759849-4	11.8381997215439	0	1.29328854400485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27217196-4	6.74342573542441	0	1.31090632228519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100952220-4	9.59404420313608	2.78643981762969	0.706595039230233	3.94347492258825	8.03093926938635e-05	0.00266526032248512	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.984600738149972	3.44759453562714
Merged-chr19-17250192-14	103.065337459077	-1.91521801191105	0.248606514777907	-7.7038126439366	1.32065437870944e-14	1.69214668688523e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.81230145025162	5.7398175616542
Merged-chr5-92509042-5	29.7798141289747	0	1.2752171711743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30196462-7	39.3324751976534	-1.43451625367831	0.288357763220582	-4.97477937703713	6.53219930326091e-07	5.72957175397165e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8799033381793	4.36149582334813
Merged-chr8-120110440-4	10.2462039246901	0	1.29196452609424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50567601-4	13.2721815645164	0	1.28325768878456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42576218-6	15.9182440668487	-2.27004984497486	0.822943457482679	-2.75845177980851	0.00580758726888683	0.0729251724966716	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18564975245863	0.825079211029734
Merged-chr8-26888289-4	9.0844232821813	0	1.29017807383214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41429372-1	4.48812712485134	-2.73369609432192	0.882838573883302	-3.0964846521118	0.00195829999337859	0.0319358800517388	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31050815199095	1.46928333126936
Merged-chr7-35167156-4	8.04222197357632	0	1.30526343120226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91195273-4	7.88010439988378	0	1.29891989005171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108997451-8	27.3029663967719	0.000626246739243505	0.335517416784499	0.00186651037446959	0.998510741054361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66658551071056	4.67705801497559
Merged-chr8-79372855-6	18.2112635595657	0	1.28697821548208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52284759-3	11.0593233245404	0	1.29548867028881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115989245-3	7.08017404993628	0	1.34878819755018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54902742-4	14.6977827465214	0	1.28808030201234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33352136-4	9.93813462016042	0	1.2908500082954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105662866-5	31.2495850495115	-0.809903535690815	0.394541957737219	-2.05276909035425	0.0400949776574367	0.31688998669604	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.58956015627537	5.50349554388041
Merged-chr10-84516569-4	9.67537182072381	0	1.29829632617193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22348736-2	5.89617291988119	0	1.30374203287792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29148140-2	5.83346225894767	-0.0614020929870271	1.05260120510558	-0.0583336715645013	0.953482847140204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13930692573687	0.581381506691384
Merged-chr3-61416699-4	7.58689431189418	0	1.2876467958131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101697006-3	6.89550559133717	0	1.31153568222359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109255204-9	84.447747828399	0.797439777204237	0.232192588911539	3.43438944775298	0.0005938902679013	0.0125755543267169	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98782884795106	5.77350742537882
Merged-chr5-3432768-2	4.539406319031	0	1.33117866463285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-49116656-4	10.0855960619222	0	1.30950324740273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59656818-4	11.2561255044483	0	1.29231129201196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72742578-3	6.13089685683107	0	1.39055179179842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81338773-1	2.95971087479105	0	1.34919832718786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128760159-3	10.5888537517402	0	1.29507088938619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21806659-4	12.8782471506311	0	1.28426937625592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111036371-2	4.33335520891865	0	1.34295962476479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77832772-4	7.92237808866146	0	1.30171639598657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109255374-2	6.8063987477364	0	1.30738573228735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107271019-4	9.5352519486037	0	1.29404527606451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75171434-4	14.3555645377395	0	1.29995013898294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-37689455-4	18.3793171529661	0	1.29652726362705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100405687-9	43.7320717692213	0.388991395235767	0.223698281433241	1.73891096857556	0.0820504245718008	0.534669629444445	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47926181587549	5.84049067250327
Merged-chr11-46785168-7	36.912135439131	-2.69138780571983	0.600762625893489	-4.47995213037269	7.465978149381e-06	0.000400551566625165	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38842611800371	1.21653520045322
Merged-chr15-91186483-4	8.86937515553978	0	1.30192821619132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86541730-3	8.25291353946604	-1.0507936432837	0.506468285397204	-2.07474717288487	0.0380099729058988	0.304506045583215	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97307969033877	3.03824771725394
Merged-chr4-135440199-4	11.382278267304	0	1.29734131555839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122415585-4	20.2777142350266	0	1.30037623605038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76363834-3	6.74795216297699	0	1.29837776637539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3391570-3	12.9593074608586	0	1.28699028544707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97592068-3	6.62454394725178	0	1.3049646070979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10985520-3	5.1343677376702	0	1.33867499212834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72838442-7	31.4865825681835	-0.755882506579854	0.298247960680332	-2.53440963973605	0.0112636972682026	0.121418271476075	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11481108137804	4.38519407252551
Merged-chr7-81578069-4	8.31191250476163	0	1.29176573995258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102832506-4	10.549801604163	0	1.28957011939845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17734280-4	12.4338405666008	0	1.29286487393845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70391885-4	18.6644892541977	-0.328864701940094	0.372017563071124	-0.884003161638956	0.376694506122206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87895648070018	4.49713989306758
Merged-chr11-38123976-8	27.0451375100119	0.683783228507189	0.332254556519353	2.0580100862134	0.0395891651981123	0.314146155317043	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44330523423613	5.29672819785438
Merged-chr11-3189130-8	32.7979750097259	0	1.29209272395379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26604489-7	34.8841055530075	-1.73991332340348	0.508647514583439	-3.42066612638105	0.000624679701737646	0.013075054384929	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92110445914928	1.62559269623071
Merged-chr1-152913829-2	3.46019653533209	0	1.36477618001932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159587289-8	36.7988984828433	-1.10114486634843	0.332926383318516	-3.30747252702693	0.000941419454599198	0.0181898272265639	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55498409805233	4.29915574172033
Merged-chr6-31085090-2	3.40792376746886	0	1.35929795092646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37523895-1	3.96864649794124	0	1.32678408916002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67608368-4	19.9650863322713	0	1.32618980610267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57361723-2	4.59707207922618	0	1.41984783914193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45652570-2	5.7455996456778	0	1.30607213762035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45455771-2	5.52402946026882	0	1.32004706663842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97787779-8	19.1702762952737	0	1.27655329424392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84627493-5	19.9579679885646	-1.89925721746921	0.542349930408035	-3.5019036806003	0.000461946586397985	0.01037688608964	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04441237491484	2.30929522906377
Merged-chr9-21463965-4	6.60319079814362	0	1.29994183837761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135669993-4	8.95028421423863	0	1.304588015598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60608976-4	10.2301967041182	2.37093749428465	0.655997874128245	3.61424569772484	0.000301223308243535	0.0075014246571959	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17099483890549	3.21277539835149
Merged-chr1-138343634-3	12.1023100690579	0	1.29561218645044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74040136-3	5.41614028717209	0	1.30095226315178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145746520-8	47.4949560695227	0.604820896708212	0.553906216313965	1.0919193157518	0.274868566809921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9428890193233	2.68957347254287
Merged-chr15-93519044-4	12.1597999029924	0	1.28882213749259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27289209-2	5.75432424838524	0	1.3158950694813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80998042-5	13.7583117635857	0	1.29534874859941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45767218-5	22.2405888907943	1.79481394174785	0.504553451120647	3.55723251473445	0.000374782406922263	0.00880954358372022	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26108874524875	3.09670088589278
Merged-chr9-116183348-14	85.3634484285848	-0.530123647900178	0.200224176385007	-2.64765053587143	0.00810532642579295	0.0939679337435918	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.15003756203363	6.58131094122853
Merged-chr17-30507007-4	8.22940054688304	0	1.29782054638624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122407834-6	29.5676960695606	-2.26216919057606	0.403060919566778	-5.61247464280959	1.99453444952903e-08	3.19448157203245e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60199765130991	2.79125162590996
Merged-chr8-66492019-3	10.3375402201517	0	1.29014208615471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14042907-9	50.2360658950161	-1.26699401065387	0.247545137235651	-5.11823429376336	3.08409335450908e-07	3.14404312548753e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.79402344639571	5.53687282245996
Merged-chr5-4962155-4	9.10932599895608	0	1.29255908028551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52036546-4	12.5339983343287	0	1.29016443076448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57850051-7	34.2869340032385	-0.431583200700912	0.245805993143015	-1.75578794960385	0.0791246227429792	0.521061481520508	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32522605349547	5.9104462181399
Merged-chr11-6169465-7	25.5391881678432	-1.11039364890528	0.353479180649144	-3.14132687211197	0.00168184210532322	0.0283461236221895	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11518613240074	3.23120019216105
Merged-chr14-56034628-4	8.96649305648114	0	1.29631166828514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117177508-4	7.36231987103911	0	1.28937029269132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97129293-4	7.10910967252423	0	1.29625633641837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86750230-3	7.92258196335561	0	1.28684680805391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31718243-6	26.9638810464401	-0.847199200329785	0.464115462041577	-1.82540611037408	0.067939767903348	0.465219749912205	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.861620217163	4.01226245848961
Merged-chr2-77275299-2	4.37837149130553	0	1.32308231440395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36669711-4	12.0837275285129	0	1.28813752896023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66405940-3	17.9685121010798	0	1.28552830450627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135446175-4	8.54522267418881	0	1.34704272951041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122430126-1	7.92249899578788	-1.89599970055936	0.61808895041028	-3.06751916419283	0.00215843619953841	0.0343509916938716	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97407069917827	3.06605598527381
Merged-chrX-159704775-4	9.40961663151665	0	1.29225908202057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21175787-4	9.94004064501658	0	1.29127098852364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136811569-8	46.8495957187038	-0.736186564787368	0.241159514687871	-3.05269549799933	0.00226795946955306	0.0357113444572083	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1629285353433	5.42918566591047
Merged-chr13-18808493-7	18.3093733688174	0	1.280208488066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14642620-8	46.9827682230442	-1.2831185613565	0.282141857773213	-4.54777809816464	5.42152546107607e-06	0.000308870970165194	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92462487125489	4.57983984017819
Merged-chr2-84455373-3	9.60388919341247	0.39012354969893	0.532468019491138	0.732670386611686	0.46375948979313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10966074260653	3.55165473412136
Merged-chr2-128065722-3	9.39109779565041	0	1.28885864673062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59964808-4	11.2717813188489	0	1.30764080607889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7992814-4	14.457222315784	0	1.33152063341098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36320133-4	8.59043477484607	0	1.29175767015291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59231799-4	14.315240211689	0	1.31374983184312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85574995-4	6.39374831213236	0	1.32041265570177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130916863-4	8.50235483258306	0	1.29203131783812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96133498-2	4.29040104678193	0	1.3338736822552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3651680-6	20.5632921315181	-1.1020716804456	0.426790259628125	-2.58223250316413	0.00981634276150973	0.109426600834803	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81920271775343	3.71559183919148
Merged-chr11-115660575-2	9.39267671820932	0	1.31566920299829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-135601849-2	3.93405637568736	0	1.40551412649616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28417700-2	7.51792124199537	0	1.3402539780648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119869101-2	6.22174053327485	-4.26898355364549	1.05594691083802	-4.04280130926048	5.28163750908104e-05	0.00190156410285625	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01835287347015	0
Merged-chr8-106972075-6	20.0586184491124	-0.48169342533222	0.458572906940094	-1.05041841339123	0.293525783476763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51557301378681	3.67574524889087
Merged-chr1-161376455-4	12.2215359899461	-4.32664241415055	0.859988845038415	-5.03104480844432	4.87814111191317e-07	4.57998576291779e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93231679325826	0.851599296279844
Merged-chr8-79150719-4	12.1101254559375	0	1.31708406378786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152881082-3	8.95842855116659	0	1.30166391007688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83408347-3	11.5177350973055	0	1.29535274144577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69257983-2	5.07482607447055	0	1.34365970951718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167166603-2	5.64391556452223	0	1.29494829750068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84706879-2	5.66471405692576	0	1.33224642284914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4618124-4	6.5094115031214	0	1.32934233681046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5841675-4	11.868941981691	0	1.29218061647963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61415492-2	6.13474124447724	0	1.30972253026181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107763849-4	7.45091637823885	0	1.2930431066572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121352489-7	33.5499231277033	0.159521791071772	0.337042658999921	0.473298518190865	0.636000219167691	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4943893038759	3.81013021070994
Merged-chr19-47441750-8	38.5710638597959	-0.748160853738575	0.283381003968911	-2.64012352013776	0.00828758153506084	0.0956989402703809	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03616408097673	5.19983652964804
Merged-chr17-27571430-8	32.5678378764132	0.00196489856618758	0.295287213500194	0.00665419454806936	0.994690760086237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87004181863433	4.82916576972337
Merged-chr9-90109550-3	5.92417322879715	0	1.31153126332803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70552021-4	11.4887290510558	0.424528018033356	0.376096745501246	1.12877344223642	0.258993418684156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06490859755603	4.33212463179429
Merged-chr4-99179667-6	39.4469521852822	-0.931707667164049	0.383690164386407	-2.42828134167585	0.0151705698491596	0.150934235286721	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86076058712329	4.04139222284796
Merged-chr10-108158001-4	8.15863840591415	0	1.31524062878641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104574768-8	51.2487606775727	-0.618836941000802	0.229488544982083	-2.69659185406887	0.00700530742419352	0.084149795307826	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.50532459251267	5.83216568430632
Merged-chr6-99095750-3	4.58351085258449	0	1.33202180882177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55520693-1	2.41217883728763	0	1.42109899453018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83860245-1	3.66004981674604	-0.491584290110285	0.912786589814394	-0.53855336569991	0.59019507295485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89668511539404	1.29358708977899
Merged-chr14-32770641-2	4.23729343386149	0	1.32558376602708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6485173-1	2.4193367210944	-1.60756164204784	1.28216488572364	-1.25378698164904	0.209919442264673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	0
Merged-chr17-23960547-4	12.046179164282	1.57702940223457	0.539072749442048	2.92544819575248	0.00343960438865312	0.0491073603628854	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79869777656988	3.5751510047836
Merged-chr6-57770630-3	10.6675179674544	0	1.29554643050519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63923676-1	2.62292796603108	0	1.36747744187228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161920583-1	9.11435530053601	-0.423608915581298	0.648876376424671	-0.652834547491768	0.513862948773158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89477068808882	3.82733777484472
Merged-chr8-35683710-1	5.68691467820616	0.535181647488626	0.714469296221117	0.749061786586551	0.453819965879617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88934527107116	3.40117191498704
Merged-chr1-21161938-1	2.85028328634805	0	1.33914712154031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21094968-4	23.8471895118365	-3.88284583038462	0.561247005708777	-6.91824774277615	4.57264130106643e-12	2.44921162671711e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81344601153254	1.00182956598795
Merged-chr7-19318776-4	12.1225641063282	0	1.29347939706548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81400866-3	4.23553384045861	0	1.36081898789833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95547276-2	4.95000692779651	0	1.33096660048875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65565839-3	7.17025476087008	0	1.30135122137253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113761836-4	10.4700362464447	0	1.29165569267074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102517216-8	23.4114915861271	0.991167306396121	1.04020809780967	0.952854826340219	0.340663630893831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44669184442044	3.43950205220436
Merged-chr1-87901133-2	6.53985196828445	0	1.32538982789658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68212230-7	30.7346658924219	-1.97147460616908	0.437153334909158	-4.50980113551863	6.48884246095875e-06	0.000358124915079232	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97684637593513	3.04469982910024
Merged-chr6-100214765-3	10.3231525257377	0	1.29064697845165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137951982-3	10.1308722092036	0	1.28607505555176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60899448-3	12.15398871352	-1.27890679224328	0.916599312563543	-1.39527356688326	0.162933359923664	0.878613908035299	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63049610485021	0.581381506691384
Merged-chr3-108990364-8	30.4397195546523	-0.222719212114396	0.4363396692954	-0.510426229350273	0.609752884897492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40158219264845	4.3890770318399
Merged-chr11-94031448-2	8.59201484886918	1.89935485948842	0.613216448251367	3.09736450303082	0.00195249632331054	0.031874549163313	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44283419856545	3.42284171238658
Merged-chr13-37489449-5	31.7752052463115	-0.195325085963377	0.540346004490523	-0.361481503222261	0.717739529827432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71494522469944	2.52137828747792
Merged-chr17-23546901-18	83.7275747273146	0.421231903198224	0.203493013610553	2.0700067079668	0.0384517162900298	0.307246986144324	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40761320025169	6.79216742685533
Merged-chr2-167055799-4	10.0202465859188	0	1.29153081813649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70834608-3	22.6326286150143	0	1.3073860132683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72820804-4	8.68694761215863	0	1.30095245289313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26696886-7	36.5577022520316	-1.50279269165626	0.290308728961474	-5.17653291732641	2.26047185118431e-07	2.42948673663634e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24246767978703	4.74351278562112
Merged-chr13-9418798-4	7.09839290661918	0	1.28752203365727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21321765-4	8.18119331180747	0	1.29444662780039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101259303-3	15.9588668427023	0	1.29672694533096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44385346-6	20.0525969583691	-0.972259177074588	0.384921508486869	-2.52586346992287	0.0115414324507293	0.123697957179819	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51557171922573	3.31463781495015
Merged-chr5-3387392-4	15.6007020133948	0	1.29392969670974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58540568-6	21.1216426743582	-1.5286700720057	0.421615181426626	-3.62574722009088	0.000288127098342618	0.00723595440749298	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76699700405121	4.24109773241947
Merged-chr5-150599710-4	13.5345899900858	0	1.28486332819511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63254069-3	8.5870999076264	0	1.30525900385079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45974007-4	9.16324964610486	0	1.29609935011022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41482526-9	38.9056067666684	0.71679264769978	0.348171148823421	2.05873648670214	0.0395194889194205	0.313783781643797	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78241947299347	4.41323808252702
Merged-chr18-67988774-3	6.85107391389964	0	1.32082494313331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19416713-5	20.8512522016521	0	1.3198563488406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76458955-8	31.0112987320505	0.273458148185323	0.336205491428454	0.813366096500884	0.416008191528061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07827951992574	4.26283911907934
Merged-chr12-75687647-4	13.977986554548	0	1.29189164400441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97479749-2	32.9010050453116	1.13356061391581	0.351830822168662	3.22189115475619	0.00127347503179364	0.0229499446849385	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85842160006276	5.8065437573397
Merged-chr9-40758077-12	59.5886397787244	0.794555332116583	0.22098019211091	3.59559526365963	0.000323650661795873	0.00792998730622913	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37927238054228	6.1402345541937
Merged-chr1-131188693-6	31.6281339179093	-1.10907364117977	0.388370605040026	-2.85570953822694	0.00429407775917399	0.0578872608708382	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44486586148951	2.75541628522075
Merged-chr2-26516474-3	4.12828897205902	0	1.34578513502558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60978511-4	7.89591161133427	0	1.29455841866351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50196134-3	4.99305746749658	0	1.36727041052484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111079816-3	9.18561033419328	0	1.36024381469514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98227248-4	15.7801923521189	0	1.29034627373134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17967446-4	11.0912468311985	0	1.29671186083537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19682721-4	12.2680905778628	0	1.29571526036609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40743759-11	67.157968879175	0.176839532391893	0.236016014066926	0.749269209934831	0.453694961841687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.58197762707844	6.6920360800497
Merged-chr8-70864841-7	34.1099765567095	-1.68712448965198	0.328006497883307	-5.14357032723235	2.69565676437675e-07	2.81390394448823e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86901094283365	4.2064293094022
Merged-chr19-10025699-4	8.46762119799689	0	1.30287515308241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105990458-2	9.05951648861577	1.7066700015468	0.863383536459018	1.97672289252392	0.0480729616803055	0.360663117561566	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55528178680758	2.01555752371922
Merged-chr5-115490075-11	86.7975913779454	0.873020115286102	0.231774452098653	3.76667966370386	0.000165433044962828	0.00471863280495022	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50215576569635	6.40777979454102
Merged-chr4-137373869-3	14.0364257000694	0.800566238156383	0.492372625033086	1.62593571911637	0.103963330577299	0.639757773792654	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79820678440117	3.71871892516176
Merged-chr14-26814069-3	7.92940410430875	0	1.32774354154931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96767239-4	7.14762864428923	0	1.30021313723747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38997248-4	10.593482694693	0	1.28802895582463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57712865-4	6.33853004121851	0	1.30739742688425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51677985-2	5.91753334717806	0	1.30203803547422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128766979-4	7.31650386445562	0	1.30290765045858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-17637442-1	3.79375869492602	0	1.37854621063348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128925174-4	9.17323824579416	0	1.28807455817543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58627398-4	8.39715531375443	0	1.29796861602062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123009036-4	7.94868545682929	0	1.29029556213472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22631697-2	3.34668985597927	0	1.41017655247827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24609721-2	2.22344815262778	0	1.45868963565677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145832087-4	11.4921766120165	0	1.2923289945376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9231658-4	11.500055817609	0	1.31518596910264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24766583-3	8.67840544843246	0	1.38788556766148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89858347-2	3.87349838271095	0	1.33145854831159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125383968-2	5.0517413333298	-0.185921838513967	1.35289819076291	-0.13742485560508	0.890694985497879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	0.306240821987646
Merged-chr14-70927566-8	36.9489122595965	-0.500359383173361	0.31596346259131	-1.58359887269802	0.11328503063679	0.680892891834099	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03308866198017	4.59949561735258
Merged-chr8-27058454-4	10.5968421334655	0	1.29375797919926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36817517-4	7.56903603067186	0	1.28704259442404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138928964-4	8.19323517354144	0	1.30475372618819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57191041-4	14.7521839976719	0	1.29969625399574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110747633-2	4.97875382081273	0	1.3246715605751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84890109-4	8.10889212354597	0	1.28888748985667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22003089-4	6.96682709614883	0	1.29568183905253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133758588-4	13.517834936905	0	1.32013217574226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32635047-4	9.9379944962062	0	1.28825486758791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5792672-4	9.42575044053131	0	1.28547511968597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105121303-11	56.4942507759843	0.181678872110708	0.230967723746624	0.786598530580893	0.431516919734711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19293167466298	6.34715383438318
Merged-chr3-136703079-4	7.66868642267554	0	1.29684277317857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120352846-2	8.54281330891492	0	1.30364335595778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111495858-1	2.82538926559061	0	1.38138948283326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6145012-6	17.2068348592313	-0.179226201128087	0.448609753857121	-0.39951472206547	0.689513978203899	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15851890163791	3.95279351798222
Merged-chr4-134918615-3	7.15578100790184	0	1.34960597674476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11843648-4	7.59732205064254	0	1.30743389066304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3142569-5	31.1061809692686	0	1.30594828810944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48561043-4	12.156859895047	0.059476810810279	0.43295984730055	0.137372578961096	0.890736304361298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58362787285182	4.58330110212014
Merged-chr12-100831198-4	9.46247117259484	0	1.30342938363417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71223068-5	11.4686238404688	0	1.29373795637005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27625389-3	6.90408945820463	0	1.31416410880026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14758838-6	31.7373833674557	-0.537941165636995	0.423389580851162	-1.27055834618212	0.203885813461588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7244773539672	3.27620127671797
Merged-chr9-100440394-10	46.4921267508037	-0.0743550345164432	0.329966591656066	-0.225341099361797	0.821713929074973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66228045586799	4.59982408074952
Merged-chr5-122379940-4	8.5771987233287	0	1.3006454147211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115848211-2	6.88521366342094	1.35763321790965	0.699021155054954	1.94219188946137	0.0521138745862229	0.381946304252055	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34530612972075	2.21973468539322
Merged-chr7-49923168-2	3.51316274918391	0	1.3472865419987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24777255-4	19.3813135981381	0	1.28258372655858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70546392-4	10.2340125362408	0	1.30184800210275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62559120-4	13.7514143814989	0	1.30135844212547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79456659-3	14.2700125719963	0	1.28826531390176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163297396-3	6.07522107285444	0	1.31718264211333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125617477-2	9.29995232004294	-2.69129787534164	0.736715419019315	-3.65310377095702	0.000259089462486105	0.00665505503758531	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24677724789763	1.29915063860089
Merged-chr4-139208475-7	23.5548254891987	0.792375353381651	0.451673516834558	1.75430996914501	0.0793774084929407	0.52209321946449	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65447294861662	4.2164724343325
Merged-chr1-132133670-4	13.5690062583842	0	1.28951390186076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34633668-4	8.5675171277104	0	1.30127351299708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167342032-4	9.46512698851142	0	1.30342936793488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103115556-4	16.134655913863	0	1.29230678230178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122007877-4	8.51262363929321	0	1.30860550751431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118638086-6	42.2566726626276	-2.75801742797853	0.339888638962735	-8.1144737182019	4.87894608760995e-16	1.02845035819664e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.79599025037532	3.3446835389515
Merged-chr7-100991111-7	23.0323616928315	-1.89405812391424	0.484037014108423	-3.91304397950438	9.11399277602708e-05	0.0029367010450802	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60174083434003	1.82431113536981
Merged-chr13-76256572-8	58.4830684373394	0.100426167300548	0.224988466332983	0.446361402152574	0.655336209132808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.75201017740066	6.85890757583976
Merged-chr2-181410857-4	10.0118608204653	0	1.29552492187973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84172476-4	11.6967416317599	0	1.28830492479949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152585764-4	10.415817394828	0	1.29568516920165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110684571-7	35.3136931076086	-2.11141976650573	0.321111371043362	-6.5753503516405	4.85387397996543e-11	1.92231060057467e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01028209002736	3.88872003537756
Merged-chr6-149261013-4	17.9590037733214	0	1.31755946300798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117731433-4	7.44168950645289	0	1.29198018880098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-124071781-8	38.784714362661	-2.08715292851179	0.386609313004629	-5.39861006526452	6.71591616762067e-08	8.86582339170384e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81942763221102	3.74671264876395
Merged-chr2-90575249-4	7.27289629512283	0	1.29470833933244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121571740-2	2.77379956830737	0	1.48891345346332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145743224-1	3.26503272704415	0	1.35275231906951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43218294-4	12.768272729508	0	1.28307378337551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82941640-2	5.73850956130198	-1.20194860689867	0.950081643958494	-1.26510033589406	0.205835362511762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15704762341917	1.29072512625674
Merged-chr10-71356326-3	9.08227817906639	0	1.29716916252642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56174753-1	1.62859132309095	0	1.62810766116703	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119677343-4	8.08701056087428	-1.27325547201913	1.18152679929831	-1.07763571065446	0.281196359100323	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	0
Merged-chrX-93862675-1	2.71050780390093	0	1.36982894514241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36576351-5	36.1354719182809	-0.0894133560775923	0.484907878700434	-0.184392458867079	0.853705585342586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00648456398086	2.93171244472175
Merged-chr11-94133483-4	8.6018620968561	0	1.29788754417059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46832136-4	13.2588641794162	0	1.28830119697371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159274439-1	2.77353821466532	-2.23847116563694	0.9816295247788	-2.28036250859646	0.0225861972763859	0.206220154704864	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19299413364463	1.03956264035389
Merged-chr5-74774729-1	1.37216012638026	0	1.60637180042861	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120077188-1	2.78120163247477	0	1.35174641730022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106672251-1	2.64225038840804	-2.92291338909298	1.29977888215214	-2.24877741070335	0.024526661250474	0.219460386974322	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.388056098655	0.469435083901436
Merged-chr19-46645740-1	3.95629139847705	0.11299815335413	1.36829670626437	0.0825830778052738	0.934183057262064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr1-185279351-1	3.12149114637125	0	1.3796496662238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64156018-3	11.7440617904109	-1.44068826911715	0.601790129707553	-2.39400448428304	0.016665545036045	0.162509719086155	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87832322502801	1.99642079673038
Merged-chr13-113465274-2	2.41246039393991	0	1.64491467705732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152121798-1	1.2391313482695	0	2.27254545185365	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54972874-2	2.52268870933153	0	1.34492709684622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9874176-2	4.38233031428593	0	1.31329212712763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144714804-4	19.6806160554328	0	1.30963609432222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84772040-12	82.2177196616465	0.494419713711239	0.239972227552507	2.06032055773228	0.0393679058886074	0.312846306481447	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89384408353013	6.36486455994881
Merged-chr2-84623895-8	40.6914144770327	0.579727439789041	0.308012123512018	1.88215786177138	0.0598145850783704	0.422693184441569	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94219367611505	4.68842369727784
Merged-chr19-46864300-4	8.51481381458006	0	1.29370795926507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83659542-4	17.751972976842	0.412290309230316	0.439196266795463	0.93873819155736	0.347865179789219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5346572302551	4.93744572927802
Merged-chr14-31402827-4	15.9191771773587	0	1.29263299997022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11100533-2	5.03084290064977	0	1.3101500202699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131110987-5	53.065663589262	-0.965354228691386	0.57306589250261	-1.6845431586857	0.0920767459408199	0.582294303711295	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05095510033868	1.5268023559189
Merged-chr16-33624914-3	9.04693217987398	0	1.29646710762172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107478180-4	7.71405045385747	0	1.30866779545574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78790593-2	4.92108091189787	0	1.33873947010687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83103254-9	43.6183971460762	0.626273539869384	0.237568087363219	2.63618546927084	0.00838438899972091	0.0966460193289403	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82394955777353	6.44140318159246
Merged-chr19-21319762-2	3.88412262073257	0	1.30988022469747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54303484-4	11.6764269165253	0	1.29157590813926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35380152-4	14.5988952839713	0.726859535174868	0.466178278387618	1.55918790915972	0.11895191169491	0.705997075342241	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27109923135606	3.92518750530999
Merged-chr3-22010095-4	11.3784991685872	0	1.28907429235995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116836181-3	9.44802092381538	3.4050529366146	1.05651465047242	3.22291123468286	0.00126894870572967	0.0228873094464838	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr10-95298670-3	11.2486327745488	0	1.29712815527473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81290751-4	8.27784493807305	0	1.29100934975875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71296209-3	7.01465283511574	0	1.29776678537816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145307604-14	127.353665368963	1.27257632798332	0.201423331900129	6.31791916049872	2.65108620575173e-10	8.13323376530763e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46291708467	6.75603512795958
Merged-chr6-38676880-4	11.0736703494816	0	1.28517349956544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113680234-3	14.2408688070394	0	1.31316754257344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117519143-4	11.7182595567067	0	1.28862697158561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46806970-2	7.10690877515987	0	1.29611427302982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-108140940-4	8.46570635312844	0	1.2952977082809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3133035-4	17.8987438800327	0	1.29560356379371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9857750-4	17.6468465757458	0	1.29401132432428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145738122-4	19.7412452554957	0	1.29595157712495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36614659-3	6.02989176416865	0	1.30526197932095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52655333-6	24.0682639974153	1.55232368849437	0.442150633778908	3.51084804566985	0.000446679650132061	0.0101034827790408	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09064801920252	5.7665358575271
Merged-chr2-165453566-6	18.5932601091631	-2.70424648399149	0.754071229040111	-3.58619501692677	0.000335538069961541	0.00816917687023354	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46258580113551	1.07938469868934
Merged-chr10-8757194-8	37.1015279119677	0.830213946765257	0.322604604432097	2.57347209357641	0.0100683766111795	0.111551327483387	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4129954335526	5.13156420331452
Merged-chr14-62354577-3	5.52345576511526	3.89293545171765	1.13387901089734	3.43328998447271	0.000596303963473869	0.012605900969818	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.57167815999277
Merged-chr4-129877412-8	26.3165592813836	0.251090170768014	0.274038489941496	0.916258773800786	0.359531185423172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79585214455168	5.04293040230255
Merged-chr7-97027032-6	35.2876057850545	2.88175741526969	0.448036655406367	6.43196796622801	1.25962291545943e-10	4.24285149657792e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90797099917819	4.71370181567302
Merged-chr13-23778568-3	11.5669581800026	-1.19247927338332	0.4504754022664	-2.64715735284057	0.00811715733167962	0.0940300944860728	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55993033933601	3.49279102298918
Merged-chr15-95962591-3	5.60651108887523	0	1.34599796241651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77506710-3	6.85468577503732	0	1.31255904116074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-91457390-2	5.03874743993428	1.30532821954663	1.31278579759679	0.994319272752791	0.320067455751953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-74808308-4	8.22244887319312	0	1.29932785874983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16651239-8	25.8510419701302	-0.535830562334588	0.310553414880413	-1.72540547506432	0.0844544253167404	0.546303591046101	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79000750675241	4.05929468548237
Merged-chr16-31803888-2	3.96521883926047	0	1.34490941837184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79284182-4	8.32384031814775	0	1.29114852555845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72172945-5	13.1839940978495	0	1.29624368640809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61839541-3	11.1115556261275	0	1.29275086066852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135368398-3	8.48326553128348	0	1.28967416569537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121613891-6	14.3070742424748	0	1.3014775956742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95635885-6	60.8590675582431	4.21994925946345	0.599816257576573	7.03540326918319	1.9868551526263e-12	1.19112877801393e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.864507874037491	4.75318206306147
Merged-chr18-61489314-5	19.2713755852515	1.22359377409805	0.524675345643488	2.33209695149173	0.0196955913947333	0.185130626478746	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75542861513823	3.26847285322946
Merged-chr2-155762166-6	20.547395658822	-3.9469286383557	0.740255986632724	-5.33184291600192	9.72210220079106e-08	1.20779560914999e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26573245477111	1.19380919831911
Merged-chr17-26529551-3	19.2229783971822	0.502792198764509	0.369728727269087	1.35989486799758	0.173863195250701	0.921689880537152	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8811580783404	5.48637819355029
Merged-chrX-102033734-4	10.1170993458278	0	1.28543572536005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150474972-4	7.65079703668298	0	1.32221559686507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83306959-4	9.56698593065036	0	1.29511109470951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66143117-4	19.4965732441177	-1.20186849857011	0.665458999643186	-1.80607445269286	0.0709067107373313	0.480401235857092	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31036735185847	1.8834919615147
Merged-chr10-25279530-4	10.3963257776969	0	1.29108223740591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64748076-3	11.391120806375	0	1.29003187580847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124150190-5	25.9568346286272	-1.34242153935748	0.495763853376092	-2.70778422068441	0.00677340453160496	0.082059235393513	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5147542204762	2.87271081946269
Merged-chr12-33434037-6	34.8439978162129	-0.307732663388186	0.345690158065081	-0.890197930744244	0.373359615571632	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1225483877638	3.70128464298507
Merged-chr11-119394505-6	19.7615908558389	-1.57236426130552	0.482223996088157	-3.26065122030567	0.00111156677253579	0.0205943981622125	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82405629498714	2.74833268732204
Merged-chr11-51918133-5	10.8012414702826	0	1.29783600901783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79182504-2	3.15505304764479	0	1.4001296671502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4067264-2	6.06801835691363	0	1.32994411384806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101373686-2	6.37422494080681	0	1.34044732305501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12087587-4	13.5011044821466	0	1.28869399162868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51957091-2	3.66400040057857	0	1.46947794755047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66494980-2	12.558651801031	0	1.30095437826456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85552108-2	3.18087338013005	0	1.39638398651761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82171947-2	2.1080384000086	0	1.63686604990199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55756913-2	4.65990325721722	0	1.32837687110103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129760026-4	11.0535148460898	0	1.29742496564637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102883125-1	3.29322735500985	0	1.39313745716964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143047727-2	3.2367719649234	0	1.35045421211071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71004043-7	25.181280544889	-1.79608669786009	0.395753427608865	-4.53839833734861	5.66831112086213e-06	0.000320626150561494	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03151448491617	3.20604946077159
Merged-chr9-40325176-4	8.98595723139962	0	1.29615616284755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139203550-4	8.832770347146	0	1.29902009363059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93357395-3	10.3306796779363	-1.78671396846089	0.516509745381422	-3.4592066934603	0.000541768980552941	0.0116916894990794	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36662991605542	2.76501444179017
Merged-chr16-55951162-3	8.20944739150155	0	1.28720682483424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29950605-4	6.73521314577324	0	1.30695805765658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21202318-4	9.15448354200469	0	1.29470328255374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101649059-4	9.77204761740697	0	1.2824040249691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6697342-4	7.08980494111174	0	1.30985214272079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30974744-4	7.95486653175853	-0.899354901617909	1.23452992557293	-0.728499879175085	0.466307642599718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr3-89905624-2	4.83108715718009	0	1.3276701744941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42354356-6	20.8694516637892	0	1.28682732089948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83277573-8	24.3863932287445	0	1.27810690354196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55182800-7	35.2260882973663	-1.04963558723736	0.388197705555515	-2.70386860152953	0.00685373854799309	0.0828458008059853	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75119898485099	2.75386073521305
Merged-chr11-108079636-2	4.69962273306901	0	1.30493637473824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127590427-8	30.856023490152	0.707892284555256	0.324830608206086	2.17926595176689	0.0293119170335476	0.251697310180578	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00313901357466	4.69545245342952
Merged-chr19-37474551-2	11.3573478070034	1.4006041652057	0.501974630543091	2.79018914499798	0.00526772575974954	0.0678676670931769	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12740748539967	3.85099806448001
Merged-chrX-9489571-2	4.90061282843435	0	1.36528250837377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88452603-2	4.11887788543527	0	1.78005857469083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27938500-6	20.5433695578484	-1.60978587845084	0.639327952964331	-2.51793445130445	0.0118045287325244	0.12583666142831	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96117258854249	1.26501898168246
Merged-chr8-46928900-3	8.27026597476459	0	1.30302175081328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58246234-4	9.91324547504001	0	1.29171464404625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123563756-4	8.39531133902599	0	1.31428967614084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43265380-8	25.5482761036931	0.56470804415218	0.311257265899641	1.81428068038823	0.0696345243748837	0.473500273652565	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3267825584019	4.8860411895151
Merged-chr16-87688987-4	15.4852215173214	0	1.28775438422631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62448282-4	7.45540954550204	0	1.31154685833025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54758170-4	6.84788551578318	0	1.29268205715453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120881244-8	39.9917316449625	-0.665968111666685	0.256212206270401	-2.59928331035032	0.00934186374367392	0.105250591067951	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44815062892202	4.77702842310616
Merged-chr9-89237327-2	4.6644010154287	0	1.32801777868193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63411690-4	8.52458205835915	0	1.28663047337245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113645913-4	10.4834776762352	-0.161327354193683	0.751750868968938	-0.214602151926942	0.830077516030132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07646214604002	1.49176722630688
Merged-chr7-80179532-5	21.8219929452749	-0.145498616831562	0.491592789086541	-0.295973863046125	0.767250041883524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56553120314698	3.04244383180092
Merged-chr5-3787705-3	10.9178261939844	0	1.33297678622323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96280429-3	6.16335658004638	0	1.29859731741692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108104622-7	35.7579278967972	-0.309559913565463	0.295926475295663	-1.04607035668633	0.295528550208768	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79442546421344	5.50229242479979
Merged-chr2-158076851-7	32.3155148669339	-1.71605456251067	0.40471352797103	-4.24017099481169	2.2334957889366e-05	0.000959566178986527	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99187236412531	3.16949950908321
Merged-chr11-34773729-4	11.5650045651172	0	1.2860073302262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8861119-4	9.77333304870933	0	1.30019191370901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71113372-4	14.508247517344	-0.165918980186571	0.438409977516698	-0.378456213807889	0.705091715363813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85856956954316	4.68267376768399
Merged-chr8-80984090-9	26.2533574992792	-1.08369372489836	0.379942315645142	-2.85225856735185	0.0043409774268509	0.0583313820553154	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06349731201446	3.91491556800296
Merged-chr9-40701905-6	31.1016866708164	0.250099089718535	0.292928119625061	0.853789967445442	0.393221374292414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52513387721201	5.80723395964403
Merged-chr12-112578852-4	16.7899819279719	0	1.29281755525152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91154141-4	8.44747519359423	0	1.29821865808211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34193220-2	7.0263934510897	2.06381237194579	0.771454465208942	2.67522253745311	0.00746796606912527	0.0881983934128068	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0285381822752	3.40329553716061
Merged-chr3-65943497-2	10.2906163123943	1.82190285003031	0.572940126499943	3.17991839943243	0.00147316529548894	0.0256225622180725	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41908596820549	4.013680092543
Merged-chrX-101452614-2	4.45917947342695	0	1.38627768102535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73659934-4	10.2140601416699	0	1.30085715393064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131089958-7	26.8576298794816	-0.230042276825402	0.307325911988754	-0.748528737250831	0.454141298071025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53515934991492	4.34577227741665
Merged-chr12-17454042-3	8.65214659646788	-3.52445390278156	0.793204918132431	-4.4433081820518	8.85861348965031e-06	0.000458928868323551	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72657568870411	1.14490468848716
Merged-chr11-19493444-6	15.2565667752111	0	1.29327691482612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78264628-5	11.4091849568147	0	1.28787901749672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5162197-4	9.99383523725395	0	1.28997846342832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84191143-4	7.78524638039717	0	1.28948583452313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88141874-6	23.5944230091205	-1.00511445303457	0.4496888579586	-2.23513310424761	0.0254086116297072	0.225217404882942	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87604046068608	2.35651348678689
Merged-chr19-10266648-4	6.15916829728146	0	1.30540099895573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89297478-4	12.0168001814816	0	1.29943946216316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-153665103-3	7.76393760837877	0	1.30026071197462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125393388-7	154.327008559464	1.18088100693428	0.343620471123577	3.43658514602757	0.000589097156658807	0.0125024822341755	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59204246594845	4.67263828725516
Merged-chr12-116435407-8	37.7278450669438	1.34274543646918	0.343295997405983	3.91133437795735	9.17875899137193e-05	0.00295320130502309	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48396382021703	5.03359755379658
Merged-chr1-172335844-9	46.3406531966261	-0.44098803428643	0.360315835234013	-1.22389301597034	0.220992588600308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22352448439898	4.74958134170638
Merged-chr8-121792333-6	43.0249479837039	0.272168892119464	0.377924127884839	0.720168076176388	0.471421516894831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66050636146502	3.86501452460786
Merged-chr3-97737836-1	2.50255696360386	0	1.46146456072258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42558914-2	5.91339407898467	-1.89341697352481	1.2057676142497	-1.57030007370286	0.116345317056681	0.694183810115582	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08776570511608	0
Merged-chr9-58892394-1	2.05443634741639	0	1.4107324802366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102390229-1	3.49337619597267	0	1.43578413277724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103007354-1	1.96411302514757	0	1.43463314071669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54955277-3	9.65725091745226	0	1.30279654078731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99987099-3	8.01254033521386	0	1.31299723015848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82239313-1	2.34279464024121	0	1.501349290737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105719878-3	11.3715091908631	-2.87690157791341	0.774152730382228	-3.7161938013097	0.00020224647526395	0.00551585900358853	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91191141867749	0.989878296978726
Merged-chr2-32488851-3	4.90485568403413	0	1.31054771693477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37538623-1	2.75501506095114	-1.27672722315255	1.62568643335591	-0.785346544669746	0.432250413066035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	0
Merged-chr6-89294431-1	4.47615592849152	0	1.32062705210574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61733713-1	2.95165874731051	0	1.40061187133886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70865786-2	4.17857866831707	0.317399116772666	1.22105593516022	0.25993822857183	0.794911422404154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.898973605861379	0.581381506691384
Merged-chr17-86601294-1	2.19304266053748	0	1.43126189620896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70328521-6	32.6007886952426	-0.204283496728503	0.402206733280312	-0.507906705246853	0.611518772123228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6089745578728	3.47368332555948
Merged-chr18-38144369-1	3.60657986206837	-1.1841222251869	1.05185457093695	-1.12574709271085	0.260272584311193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80491851343583	0.733321818366247
Merged-chr8-124219394-9	54.8537346065506	-0.531529716884939	0.255969502233277	-2.07653533818467	0.0378444662885017	0.303470915951458	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5907049151082	5.97285219510691
Merged-chr11-64832257-10	65.1448033871702	-0.284285900371427	0.238382866258477	-1.1925601232732	0.233041690950458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97431286931016	5.7201061756512
Merged-chr15-81101518-10	48.4729622243477	1.68543300508528	0.273221753760096	6.16873650026121	6.88378311475708e-10	1.86650494363866e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72925235221766	6.30484855412744
Merged-chr19-47395664-4	9.21994728973477	0.160930647035263	0.897275395200286	0.179354797753416	0.85765912196668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05955357480168	0.666688015277142
Merged-chr10-41530173-4	12.8860134774847	0	1.30184106730223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24641609-4	6.70538488466131	0	1.30050654644213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176832779-10	73.6239473633635	-1.02000120874744	0.22474579374154	-4.53846629014311	5.66648518389399e-06	0.000320626150561494	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9134414166226	4.83047188037229
Merged-chr14-17885433-2	6.69450672039533	0	1.29636392377159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84597120-2	8.2499280190803	0	1.29601649454979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148645049-2	5.7148314539979	0	1.30936700772851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106212041-5	17.3529485972149	0.815466518324968	0.506418149264319	1.6102632172832	0.107340405629123	0.654682298510425	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11743599196074	3.91512095232653
Merged-chr14-40979197-4	7.02889506356924	0	1.31807289480018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33132082-9	36.7171880479979	0.478513169768802	0.295574487059545	1.61892582316282	0.10546322398513	0.646249046749091	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73560912822115	5.12212628781453
Merged-chr11-44581398-7	51.5354356090974	-0.389445597916449	0.207017226744646	-1.88122314282969	0.0599415708509949	0.423498960842157	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.78963737364171	6.3677203962937
Merged-chr18-11353250-2	6.46502800146147	0	1.31440528490117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14068841-2	4.64315888777223	0	1.33037280380681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23259833-3	5.33420360620461	0	1.31032411194219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53000535-4	8.25922011611103	0	1.30446358488885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50181132-3	5.05401235791362	0	1.35611625712257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8358429-5	22.1269647911271	-1.27401654518192	0.612100774723388	-2.08138365085007	0.0373988039260345	0.300837994788305	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4167203335483	1.5268023559189
Merged-chr13-63877253-8	42.1483047625247	0.284068016953906	0.31205181688932	0.910323227038477	0.362652072643824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20120918977901	4.47164051747016
Merged-chr3-20348379-4	7.02149692886735	0	1.29478281308955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149220940-3	6.98460897788172	0	1.3453503139865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-93757571-8	38.5626213705767	0.297577804664376	0.256576751691511	1.15980034318215	0.24613010434738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7208011764058	5.99218745888499
Merged-chr11-98948095-4	7.73679079251896	0	1.29881351054548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56506113-4	8.41005850249128	0	1.29768790510177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40702684-4	13.0163444979826	1.41081799820009	1.24667029098502	1.13166890107357	0.257773660795333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.563523181795778
Merged-chr3-58372593-2	5.4987291638903	0	1.33105393570249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133407905-2	6.01873850879941	0	1.31406982381003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57777257-4	11.5334334190138	0	1.29541342920375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191266754-4	12.8536812919224	0	1.30861325866874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134245853-7	21.9989333645571	-0.326286370981028	0.342128553807747	-0.953695233413281	0.340237933654154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98505121353171	4.65225619087515
Merged-chr9-13541000-8	25.5648084162138	0.449472756791108	0.267395197063654	1.6809305542018	0.0927764043536165	0.585698668620561	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71547188017853	5.14942589460697
Merged-chr2-80081518-7	29.7685330854799	1.34131055445653	0.466650886417076	2.87433409749857	0.00404880418975249	0.055500977256884	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34372695991566	3.86307350853735
Merged-chr3-135630128-4	12.6291512033036	1.85849245162245	0.691426190662367	2.68791156123558	0.00719004368271904	0.0856435644351	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2841730476268	2.90512073759599
Merged-chr13-30714799-4	11.3796097323611	0	1.29119648348508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152437674-4	6.96925925785718	0	1.30837193325457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32680306-4	8.79006172050675	0	1.29685482231031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163764935-13	72.4799275628885	0.367793949125258	0.162569835721083	2.2623751047905	0.0236742377106468	0.213558356907776	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9657859375448	7.33078288682635
Merged-chr15-73620432-2	5.05236320122231	0	1.31636603193703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23387144-8	43.0711273106974	-1.66861108267091	0.28017037489368	-5.9557013595892	2.58958835465292e-09	5.54817182370982e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06230958916311	4.36307550294095
Merged-chr10-10481353-4	10.7173414002982	0	1.28427631570148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17295555-1	4.49494069068518	-0.492162471202971	0.84343835150868	-0.583519198910777	0.559543836477052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94331783178063	1.57612722179308
Merged-chr6-98092366-4	7.80290911559079	0	1.29331046512795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6278742-4	5.00360359209879	0	1.35683124239071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80061075-1	2.93987136398907	0	1.3648831152168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47330421-2	4.46213925918831	0	1.34362086508889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129546923-12	95.6854733703768	0.904122161265416	0.229518961730742	3.93920464979307	8.17521744510467e-05	0.00270596409394668	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47097177086875	6.359232149937
Merged-chr19-29448556-4	8.18075903283788	0	1.29277876727145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29925771-4	9.78046253296102	0	1.30453764803073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24435498-4	9.52787636971331	0	1.30393549061575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65505164-10	59.4994467577659	0.245011590403112	0.191015817227082	1.28267697387509	0.199605270235503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18505642022979	6.41449223452955
Merged-chr7-4228480-8	38.8960446680905	1.48319411649094	0.243373486975341	6.0943126341499	1.09908677998605e-09	2.75175956800646e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66064526626461	6.06465600309494
Merged-chr11-119440465-4	7.99202500134758	0	1.29646477155295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101547808-5	42.1759195644711	1.55952132381514	0.724398488845004	2.15285005122205	0.0313304650906619	0.265059628665768	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69320393775779	2.29891167103117
Merged-chr4-129883087-4	20.6230945361639	0.234913947256577	0.587415360465758	0.399911141360544	0.689221965909642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91204862938859	2.73752739441368
Merged-chr4-6416168-4	8.52938512362474	0	1.29180029395231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191115314-16	109.27952153008	-0.65939510479315	0.239961997207577	-2.74791472177466	0.00599756060777536	0.0747647072635805	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.59358549916934	6.92106213418906
Merged-chr7-121078002-4	6.87165182667102	0	1.29884882221464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58802638-4	9.50372868972641	0	1.29864842192391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71315501-4	9.76158099470038	0	1.30016772650161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91344851-9	31.2575820425155	0.582009186011979	0.289094157975821	2.0132166975877	0.04409183737197	0.339242922139745	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63324862481672	5.08505660866588
Merged-chr6-81447810-8	70.4029806034866	-0.190783953771088	0.299574522618905	-0.636849729754181	0.524222729968058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43619505420826	4.02236783450319
Merged-chr13-45922661-2	4.06429012706856	0	1.36592151647902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52328219-4	11.7828521473455	0	1.28001940585421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155028882-4	10.8665094130481	0	1.29380259919548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51329937-2	2.8597933444294	0	1.36318607513358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25740014-1	2.50914628703834	0	1.35087726151394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-15519936-2	3.4069749351779	0	1.41016475483565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35564116-2	2.60770905239741	0	1.48551867360825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18959227-2	2.80114887240996	0	1.37034647594298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33837060-4	14.6893241230525	0	1.29063403477632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88319170-1	3.18863996390964	3.26930933152804	1.2956478721702	2.52330081479004	0.0116258902322245	0.124358393045497	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.77777167463237
Merged-chr10-41883125-4	13.2725468454626	0	1.29830822101427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97309514-5	23.3072768403298	-0.597049220208816	0.391448134646782	-1.5252319972033	0.127201242387173	0.73918800935263	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10958657491116	3.53041829676374
Merged-chr2-122154097-8	26.8910179053764	0.46559980354894	0.318176765181233	1.46333690734374	0.1433752134704	0.802483657339338	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65275654277704	5.15424269217091
Merged-chr9-37236079-7	33.6907101870595	-0.27453961310324	0.347618881383066	-0.789771867428298	0.429661011478955	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10490686395159	4.75616994622181
Merged-chr14-51941351-7	25.2468522291721	0.252754999076058	0.29534620251421	0.855792276739691	0.392112687957107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54241500143786	4.86467714299857
Merged-chr13-46134805-3	8.07807635401272	-1.03705752910211	0.510656471019537	-2.03083205238073	0.0422720343859082	0.328728830058498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06612115521924	3.09247499969
Merged-chr16-49888364-4	19.6503113036179	0	1.30595067292165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37541842-8	35.262245979783	-0.984876841611815	0.38085994316014	-2.58592918289047	0.00971168817208597	0.108536530220277	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65571417255008	4.47782540906367
Merged-chr1-89581281-5	15.3687851440548	0	1.2829255354781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28866367-4	14.6858840684544	0	1.30940728761952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68446075-3	6.00506744416026	0	1.29900283112285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108015293-6	24.2893076067035	-0.836684339488345	0.482683935726176	-1.7334000109815	0.0830245956497993	0.539504228745351	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52259685617925	2.5387114926347
Merged-chr10-121374827-5	53.5825328705324	1.35024449880258	0.438407709344849	3.07988310885401	0.00207081850741974	0.0332562561282503	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05940228555743	3.7263309320867
Merged-chr15-64003357-4	9.09301252856343	0	1.29928621631875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27702414-4	9.69102612665018	0	1.2982624516692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87653614-4	9.63964820758654	0	1.29825495171908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-36962590-4	13.3781940493291	0	1.30280876417507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146221579-2	3.94418320164654	0	1.32530476623224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80060523-1	2.63565528563101	0	1.38603531617103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9790996-3	6.41231368953359	-1.08567786601078	0.692289246906686	-1.56824314527757	0.116824398833263	0.696406419098556	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4903250845327	2.46523444336907
Merged-chr1-60941439-3	10.031801268937	0	1.29174748464627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21375391-4	8.83753300686581	0	1.29219344543821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73064192-4	17.0291336673803	0	1.28143556763772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22861407-2	5.93341512169838	0	1.3187922394012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21948158-5	43.7303964101124	-0.766638028289712	0.413442311023238	-1.85428053164743	0.0636990358943143	0.443429977580682	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73454992783852	4.08317361521858
Merged-chr6-146685991-11	133.019939045506	-1.46283101601023	0.258311990097672	-5.6630395494112	1.48714866132906e-08	2.5046189799796e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	8.44976583429721	6.95927496785693
Merged-chr13-51741020-4	8.63469966336266	0	1.30890431811584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54564177-10	59.919811182124	0.423345277971394	0.224187484461795	1.88835375439318	0.0589784753378191	0.418640826572358	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50357680992452	5.90965219472853
Merged-chr6-114838104-3	6.0130617824124	0	1.30139040342503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40598618-9	66.5513525905029	-1.32499488937275	0.276799396908084	-4.78684167730586	1.69426382460384e-06	0.00012354120863805	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70091638623325	5.27146549147635
Merged-chr11-59392520-4	11.7590621464184	0	1.30470455948781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60891416-4	10.6129590041518	0	1.28878072831952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9473942-3	5.518432238618	0	1.32538017132709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75053187-4	12.9964656546725	0	1.29558324631393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105317020-3	5.52466930812919	0	1.29910177008993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-98873666-2	5.56972964604842	0	1.30889707092301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65070723-5	12.8234248507583	-0.19866078560469	0.610979577462737	-0.325151270079573	0.7450665873119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43944372028472	2.07669635013709
Merged-chr17-43038880-8	38.2071118366344	1.58671528828393	0.305615881531362	5.19186136640972	2.08202012463942e-07	2.2675281177448e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62704830787304	5.06773921195742
Merged-chr4-150459808-4	10.2134264522997	-5.43605946200456	1.12917466387608	-4.8141883057705	1.47799392583413e-06	0.000110758017290777	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31915064238144	0
Merged-chr19-41320973-3	19.123494885218	-3.5166423804982	0.667640579514001	-5.26726877964501	1.3846839912298e-07	1.6362307430543e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09535303775772	1.31470332505763
Merged-chr12-3913022-4	13.4123451255529	0	1.28951425340607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23706122-6	23.7708289033194	-0.100124028414428	0.445467324630962	-0.224761779098777	0.822164601170828	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78896100527007	3.32661066584029
Merged-chr13-110563077-4	9.85215053808022	0	1.3363119219866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118602089-7	26.6893587606172	-0.492456311484276	0.44803451809366	-1.09914814952122	0.271703450757485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89179062910668	3.44714453586166
Merged-chrX-121429254-4	14.6442221317267	-0.591272469669466	0.360651948507408	-1.63945452704887	0.101118633618218	0.626303342708355	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40691200753282	4.84305670056461
Merged-chr16-91761963-4	11.9488662091607	0	1.2914456224894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62821761-4	10.6708393156758	1.31308421971554	1.04014481870263	1.26240519214752	0.206803021871196	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.04220233489076
Merged-chr12-8942213-4	6.16273111737643	0	1.31490289966853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35738069-6	16.2646910391036	-1.78371231861775	0.511697128591876	-3.48587517683808	0.000490529835332944	0.0108181446573292	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24409171484062	2.26276386882201
Merged-chr10-75513384-4	18.1192803817854	0	1.33474846627557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109019736-4	8.7076719065479	0	1.29016694271416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8763528-4	9.12188885007449	0	1.29365843632584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97576859-4	14.7924880263902	0	1.27886822331276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13495796-5	18.5081955862716	-3.09723776803294	0.647868329643955	-4.78065931967236	1.74721230294779e-06	0.000126437801936242	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68855038042544	1.69181239031707
Merged-chr12-102414736-4	20.3983433290612	-1.06454902794952	0.404010269019294	-2.63495537015344	0.00841483465596789	0.096945660336544	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40171212586274	4.23946002974044
Merged-chr10-17201319-7	34.8176150816919	-0.800337818858451	0.325021999585429	-2.46241122102287	0.0138006334393364	0.141041006056752	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77055373916105	3.8983316778012
Merged-chr15-97415694-3	10.8640788043426	0	1.30838750489165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58923306-3	9.05647464702861	0	1.30210791681174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107747516-3	6.27033480271978	0	1.31051952460798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45949247-10	74.8798157531524	1.05653688216723	0.170295601568949	6.20413488330446	5.49986006583587e-10	1.56874456882321e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83624893221919	6.8718485280135
Merged-chr3-65941239-4	10.246004983304	0	1.29798282008623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74710992-7	32.9794360449438	-0.79502673803625	0.35547853330995	-2.23649718207611	0.0253192216871957	0.224675429165058	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61714740152502	3.85937843453442
Merged-chr16-35803920-1	2.31393099978607	0	1.37993009710864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31114403-2	5.31839940179603	0	1.31046036508033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-98141-1	2.23023636186519	0	2.43325263738423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11442082-1	2.0380644603581	0	1.35686340744948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58239297-1	1.91020428815561	0	1.40247640948812	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54534051-4	8.87890759059999	0	1.28559764753638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33878779-1	4.36306059476958	0.256732174931321	1.02832391785917	0.249660802858502	0.802849673191288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46246015818418	2.36809407398891
Merged-chr3-135470162-1	2.82621773675179	0	1.3506268827742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123465855-1	1.93160669983118	0	1.53586516578316	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35827118-7	66.0678344855368	-1.40186677511144	0.319670412522595	-4.38535041153475	1.15799214032628e-05	0.00057023477318584	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82486393525627	4.45783237879169
Merged-chr17-63896039-4	7.69226037588013	0	1.30043347849457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137103134-3	5.28341117678373	0	1.34684482102234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68756965-4	12.3297903947881	0	1.2933899390534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144299716-2	4.31145528066241	0	1.34163111210453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57343177-2	3.34101149058885	0	1.32804496415229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105170301-4	20.422317376275	0	1.29143947169316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56792563-3	4.54931862514498	0	1.33343918737449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16127329-2	4.05097809594364	0	1.3729792219191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143634845-1	2.60925540201661	0	1.4035166108681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46476236-2	4.05715290622808	0	1.35463905723151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63888676-1	2.02263769106463	-2.61838687910365	1.31782837409339	-1.98689520621758	0.0469340109786666	0.354233065536146	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75146864683622	0
Merged-chr1-16182671-1	1.96624586659299	0	2.4332478464302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3728470-2	2.8602037639821	0	1.435518542171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120096397-3	4.86827955316693	0	1.38546441418855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86745745-4	11.1459896539848	0	1.28992534576663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153090671-17	113.566096510178	0.398160951567033	0.161545218263111	2.46470279868354	0.0137126939479372	0.140449796037916	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.50873565437758	6.91874984282863
Merged-chr11-79202685-6	24.873270881768	-2.40345010661062	0.489741231657217	-4.90759191027816	9.2201450996308e-07	7.52515880036919e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55581450696973	3.20191471427944
Merged-chr10-82923705-7	35.7426001031169	-1.42359672878938	0.401608270005094	-3.54473957613305	0.000393001170836309	0.00915872129438995	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53064265529415	3.37698473546808
Merged-chr10-31600285-3	7.68361143471098	0	1.32599230527001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106564453-4	17.9123888005546	0	1.29312506337249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77343548-2	21.1898128235709	0.0724066995973731	0.356049904233633	0.203361098364069	0.838852803473151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81758329646325	4.74263252254918
Merged-chr9-121314203-8	45.9706649631138	0.611317838746689	0.367463505045958	1.66361510830914	0.0961893706955946	0.601952750189075	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.415300200613	4.98448897326113
Merged-chr8-71476680-7	18.2737990029372	0	1.27671704939695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57246711-8	30.3268205146772	-0.894838076909388	0.341744760490953	-2.61843978419408	0.0088332880132262	0.100789250656937	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13162740525658	4.06955576585722
Merged-chr12-76943231-4	6.70455965262074	0	1.29247578065403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72272942-6	24.9523847022627	-0.0713906037692079	0.337847758355234	-0.21130998209597	0.832645394201066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99646179843682	4.96405157217041
Merged-chr1-7397920-9	148.556513037557	0.99708272463185	0.334218349260694	2.98332729737144	0.00285132901732892	0.0427542326678238	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24045233320099	4.78468179264966
Merged-chr16-87594261-2	5.96764442295382	-0.919717321888635	0.884621384006118	-1.03967339984885	0.298491662905625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65949410521522	0.989878296978726
Merged-chr3-65533202-4	8.79164069832216	2.86014006321382	1.13553897875781	2.51875111001701	0.0117771872545071	0.125627175699155	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.82780788634396
Merged-chr16-90323120-4	7.37534783933527	0	1.30255050865532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-8136084-2	4.0496469996119	0	1.38625891754199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114571337-2	4.12802107313273	0	1.31918916493224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72263846-4	10.0182690942926	0	1.29332465706649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119464540-2	6.13817387543689	-1.05393856756818	0.805975412962558	-1.30765597885198	0.190990020748443	0.985504887541673	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5154217132312	2.16523349939429
Merged-chr14-66257756-6	37.9835704468272	0.624814432739265	0.399440562768442	1.56422379442088	0.117765021130509	0.700650350307867	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92854913465275	3.76706983954241
Merged-chr10-41523437-4	12.8188256114402	0	1.30120130133244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92370553-4	10.0894210048536	-0.815264577261167	1.04233733471168	-0.782150413413597	0.434126182124635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34296346109966	0.73596151290311
Merged-chr1-138923085-4	10.4406551569745	0	1.29411107241045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170582559-4	8.81650777730767	0	1.29072810630881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75825163-5	21.2756970824374	-3.6345471140434	0.64357057676962	-5.64747246881124	1.62823900245948e-08	2.70047984402836e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1563007969884	1.23021119707292
Merged-chr1-157101297-8	34.297734617501	-0.594091269597363	0.326718827979324	-1.81835639308476	0.0690096787429088	0.470279118483066	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98827880380595	4.40823253479074
Merged-chr5-112240933-4	9.94692403925899	0	1.283717066235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152612911-4	11.6968739590916	0	1.29695212109376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11676172-4	14.2652142412443	0	1.28823740914825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154175548-4	9.52619470382905	0	1.31303684317368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63153887-3	6.79176798342319	0	1.31860676044454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86819418-4	9.85308279496703	0	1.29157592829546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85985934-4	10.2161429093264	0	1.29807257476726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96875910-4	8.99960823938627	0	1.29751755697277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138244654-3	7.35743671392897	0	1.3026823284949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95674317-6	38.4316577359646	1.45367507815791	0.525606282478165	2.76571100197665	0.00567988463857889	0.0716935950536172	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43920748345118	3.44249677793252
Merged-chr7-43667784-3	9.76230331635217	0	1.37405030370266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24087308-3	9.07265217269653	0	1.29011825647347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83634213-4	16.8853407915504	0	1.30585018775602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61896952-3	5.17352632469899	0	1.32771099246297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126819484-3	8.77701333535901	0	1.30303924198016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146759220-6	25.0269288241905	0.114016720185437	0.472214179143903	0.241451284652532	0.809205368825383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44124909314772	4.20986915723297
Merged-chr5-136583864-3	5.55948500264582	0	1.34173981902162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153754834-3	6.55250726220895	0	1.33911407262941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43547316-4	9.33220820405702	0	1.2847800681306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19647155-2	5.88663940687981	0	1.34396579699802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84592988-8	23.0833245747339	0.581675237667184	0.375646601386309	1.54846399653433	0.121510623553297	0.716304303717975	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01815520715372	4.62310737601705
Merged-chr10-78160128-4	7.4842315230913	0	1.28893363599157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21169027-4	9.06724673988041	0	1.30076639361913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112530047-10	64.9099109767405	-0.249268376188914	0.236595146104821	-1.05356504684368	0.292082098975282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80032523375062	5.54743251828271
Merged-chr5-111141634-4	10.451276558184	2.41332119825672	0.666929548003251	3.61855492155366	0.000296252634099186	0.00740020054581247	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34661565347015	3.22609819380517
Merged-chr13-37312760-5	15.1080379288282	-0.779300397906297	0.439223678013029	-1.77426772944418	0.0760188757570869	0.506012983113233	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88460863670381	3.09760506888322
Merged-chr5-43915397-4	12.2602643348953	0	1.28839020212806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16878852-6	35.7114842544172	0.0697896160713708	0.418963137760473	0.166576984420215	0.867702904420667	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82730501011981	5.89428616053974
Merged-chr6-52838872-4	8.14755762824678	0	1.2965684841068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27298453-4	13.301620349198	0	1.28985232789088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37319272-4	11.9028376419446	0	1.30924972263233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139233737-2	17.8457483656079	-1.79220175391542	0.506316303254419	-3.5396880218863	0.000400600294039629	0.00930263923749594	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46424287861591	3.00150490545887
Merged-chr1-86441592-3	13.5600584042451	0	1.29363075509599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30155214-3	10.2995814193675	0.12570758468618	1.34858341085737	0.0932145417733276	0.925733122024395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr4-9675458-4	11.0651329139074	-1.64923916178005	0.589766980722765	-2.79642505546663	0.0051671393391834	0.0668220635777317	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87744721213345	1.57215779683075
Merged-chr5-8312526-3	5.57847200197127	0	1.33485732654158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10764516-4	11.6622066873165	0	1.29242823028666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83221927-3	4.56010919032488	0	1.33077738836866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103698151-2	2.61691121096662	0	1.45521600489816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61512263-3	6.00260973953652	0	1.30797644147751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31428406-4	14.0738997646431	0	1.28437404581731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115163134-2	7.76196964131883	0	1.31504151445605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28383968-2	5.00077891618179	0	1.35694680812878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55297804-2	2.88880629342281	0	1.39599750385708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110538365-7	31.410000468189	-2.5175383188431	0.393665622901473	-6.39511852797265	1.60422864989207e-10	5.18960026514095e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62260285660996	3.15611580154736
Merged-chr14-93654054-1	5.69059942714864	-0.351102916217538	0.822048033638292	-0.427107543416406	0.669300998856597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05018368363508	1.50871668602081
Merged-chr2-70986977-3	8.20080872266849	0	1.28732198429639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21827110-4	10.5564892940419	0	1.28832259738374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70823292-6	20.8480851779844	1.18535903426533	0.49375309442601	2.40071211228219	0.0163632042514594	0.16004639200956	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39418999774754	5.39013921697486
Merged-chr17-31291066-4	10.0878415085311	0	1.29472875913433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125416326-6	61.3660220565151	-2.6399485022835	0.458243287894349	-5.76101946722274	8.36073952588277e-09	1.52609185770485e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32377892972394	2.46523444336907
Merged-chr8-125600159-10	80.8942646403249	-0.772063819646868	0.178547324265637	-4.32414108036823	1.53127283952645e-05	0.000711682467792998	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.86154283672513	6.07943358186039
Merged-chr19-21442058-3	13.4700006558228	-3.93870833116194	0.8464693507668	-4.65310212070165	3.26978207276821e-06	0.000207645460959292	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81472686203059	0.666688015277142
Merged-chr11-113334653-4	18.2835807033705	0	1.28368411062219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84351469-2	5.38390022581646	0	1.31955694539622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132064152-4	13.9568184236649	1.17173249933151	0.694147830730326	1.68801579066913	0.0914081977897972	0.579187442332211	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7226517784382	2.22017310661124
Merged-chr11-117993675-4	13.0572877440433	0	1.28963725725988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80556004-4	8.6531084749556	0	1.28869441265704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78765228-5	29.958574947333	-3.27280599832024	0.519034785434536	-6.30556195878132	2.87150101180368e-10	8.76827594006184e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96285628625182	2.37496550679752
Merged-chr15-38710939-4	11.193661142848	0	1.31904904268121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47658981-1	2.78518759534463	0	1.45694083055518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67295720-1	6.55043861344158	-3.66112423804265	0.768842276700451	-4.76186644386241	1.91810614714688e-06	0.000135681357489544	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83002362986964	1.19133112147929
Merged-chr19-42157973-3	6.74814280766959	0	1.33671440805204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84222674-7	34.272959771687	1.966377404576	0.346533346912451	5.67442476199206	1.39155459162877e-08	2.36188380115775e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53676698498958	5.51497634129768
Merged-chr7-75655847-7	21.3587017215891	0.387975969423717	0.355539872681198	1.09123054609294	0.275171450126972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51144205673198	5.05771277192823
Merged-chr2-38536062-4	8.02855303445668	0	1.293962183411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59551226-4	7.68024352409505	0	1.31530000252275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27677751-4	10.2292232816284	0	1.31559888123214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50407004-8	32.2461814277564	0.157756685178281	0.377467722566679	0.417934238470983	0.675995198624757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64920997435386	4.53975170086962
Merged-chr7-113180450-3	8.62717112279089	-1.02248289468873	0.84388922560492	-1.21163164982441	0.225653413633979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15580491715696	1.19133112147929
Merged-chr9-100456475-8	34.9328847559265	-0.323054100033539	0.291510671474618	-1.10820677129711	0.267772527155978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70871234151857	5.3971420543971
Merged-chr10-5208501-3	7.94495887964009	0	1.32097648020191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19601760-4	13.4005082160831	0	1.29508105540103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106634978-4	13.6608292763528	0	1.2842451802518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79180960-4	12.4142204552917	0	1.28816621107999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193002512-4	27.8133111783584	-1.4501932164175	0.879445692112218	-1.64898552511467	0.0991506001812173	0.616762981384277	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95035241052637	0.581381506691384
Merged-chr6-97867385-4	12.2082923149751	0	1.31473813742028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69223397-4	6.19480834985947	0	1.33411921088602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89253608-7	26.9340645401295	-1.15758526104343	0.353422781526121	-3.27535552757761	0.00105529074947269	0.0198329103580794	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36633733995771	4.25014710768332
Merged-chr16-45757646-9	38.74941367766	-0.501289877805073	0.323340969009618	-1.5503444532269	0.121058863096919	0.714630366177761	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66344782389904	5.0844782019425
Merged-chr5-64269790-6	19.6201189489215	-1.24052751469518	0.539346476686371	-2.30005676928996	0.0214450040416749	0.197818356028696	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74451405502769	2.73430231295182
Merged-chr18-4325797-4	6.99159488001918	0	1.33669652174338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57483072-4	10.5000806352981	0	1.29059323604802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80835478-6	33.5790721103492	0.854827082838357	0.47585430033686	1.79640508078464	0.0724301164016345	0.4880909958112	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63732143786045	3.14769774140463
Merged-chr7-100950732-5	56.0115248866109	0.238784026646208	0.423001549113086	0.56449917771429	0.572414459609678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13835492422012	3.61309561208084
Merged-chr18-80738377-7	32.5688389209651	-1.6998894618991	0.350492585783993	-4.85000120072936	1.23460727027898e-06	9.54753215191129e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49463163995124	3.46092756770582
Merged-chr10-91270594-4	15.8744714486367	0	1.28114629631954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156524251-4	7.73800208504715	0.921915075405135	1.12189153498432	0.82175062976834	0.411218837382569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.733321818366247
Merged-chr7-123330720-4	14.4512918522088	0	1.28124568790471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48429723-4	11.4670288171513	0	1.28711166055051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39196753-3	15.7117343555861	0	1.29630077456686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96723885-4	7.46188049247547	0	1.28845267270227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85400636-8	31.4964635003587	0.346036170532773	0.314187329152226	1.10136895547789	0.270736111081129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5903175856138	4.95194580791786
Merged-chr2-129602048-8	30.611678779829	-1.00536333319452	0.31038818201571	-3.23905158587397	0.0011992788061895	0.0218385600272429	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05207127390457	3.94370883467678
Merged-chr3-32297435-4	10.265735748655	0	1.296772714806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5360060-10	69.2989799102005	0.463760211165646	0.187383144215529	2.47493024576548	0.0133262200529333	0.137417575442477	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05550246024487	6.45381765899283
Merged-chr13-23521952-3	4.49632682387888	0	1.31598841267814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74379142-3	7.84456318251621	0	1.30402857710488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155122772-2	3.7178242988201	0	1.40814482687111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155224384-4	8.56356742857613	0	1.29581934684125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9373342-3	8.68695460406117	-0.898804046992801	1.24501182640991	-0.721924103793111	0.470341140951889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0
Merged-chr5-29947294-7	25.3412044415774	0	1.2834157700833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110560746-8	43.1947391226627	-0.278221961425423	0.275963691892337	-1.00818321250017	0.313366515528786	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94961563999232	4.73229469216478
Merged-chr17-65608972-4	7.34176581125445	0	1.303862479326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50827541-8	29.5522276190093	-0.258113482716775	0.390402125981335	-0.661147738547703	0.508517572887126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68212457651793	4.33150512645549
Merged-chr16-55809483-1	4.02942936932448	0	1.5242139916883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52307223-7	69.4953526848677	1.15718489369139	0.208255794333045	5.55655556858509	2.75150152262094e-08	4.21076389923156e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.33663670050892	7.51801210735077
Merged-chr4-74271407-4	9.64631353292217	0	1.30445138822935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91855925-4	8.89872546327239	0	1.28729560137499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79859111-3	4.7940304048384	0	1.37479720952296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12698082-2	4.2145779216861	0	1.36808088097446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75283067-1	4.3760501795066	1.42408913084443	0.711809152032813	2.00066145086426	0.0454288863817681	0.345788702329996	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66295868770233	3.2180769473006
Merged-chr4-109105404-2	3.33438897492015	0	1.42841428120063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143086627-1	2.23948288965786	0	1.39393286632446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92988422-5	32.6217369449214	0.441411078142715	0.252185145292297	1.75034527759791	0.0800587524743534	0.525295510379332	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09321239141001	5.52706456842792
Merged-chrX-50983757-2	2.39607440497442	0	1.52037940009832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82139590-3	4.36895184454668	0	1.41413599820307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55817250-2	5.64945571506535	0	1.33304654596356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133628725-1	1.35143913176855	1.78221333288292	1.51821913024612	1.17388412342954	0.240441442554993	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr6-83018662-1	2.69871203757637	-2.54879155603913	1.1141141964529	-2.28772917906794	0.0221532973478873	0.203005100055398	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94724380242518	0.581381506691384
Merged-chr9-118802240-1	2.64343096375457	0	1.36003340556976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88552186-5	23.9293877505902	1.63843399182007	0.49983930028496	3.27792150574394	0.00104574470984	0.0197045080188018	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79864368928996	3.41691244236207
Merged-chr16-4371227-3	8.7529822269033	0	1.31869005907346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126466791-1	4.13850055170749	0	1.35646810145471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64715468-4	13.9808388558042	0	1.32174631571837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47406721-6	22.9194119565884	-0.886544159698037	0.445139547284934	-1.99160951909438	0.0464139181263948	0.351159418071946	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44915718258863	3.01013455499922
Merged-chr6-116136358-4	8.89648685590273	0	1.29670191910417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84982256-8	37.8293565479057	0.370381616865499	0.269212339486794	1.37579732627251	0.168884389476219	0.901774743807238	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5226808300786	4.8991791569088
Merged-chr9-41071011-10	37.2866749888804	0.788742251405414	0.321992571927359	2.44956660547856	0.014302825403525	0.144698681336627	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16327459055501	4.97117855489057
Merged-chr4-138426870-7	22.8896341140013	-0.203303478050381	0.349823626945873	-0.58115994001125	0.561132664021985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11865161093236	4.6362070320978
Merged-chr6-140751246-4	8.27813207225703	0	1.30234388352929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76950471-4	11.1503900768792	0	1.30339143097492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86631326-4	8.26778508799631	0	1.30198385531219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117314017-4	7.60037982283921	0	1.31787960626905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19873818-3	10.4416880310278	0	1.32489143540888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62185184-3	7.46324969440052	0	1.29292151614836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130853529-3	8.20125290574678	0	1.29159176062141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83660575-5	20.5673839854227	-1.22281841204442	0.468477225739616	-2.610198201447	0.00904897774488734	0.102765347996184	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63730892612609	4.36992210489143
Merged-chr10-60391156-4	14.6629515795515	0	1.33210578090655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37905037-4	14.2118650411676	0	1.28215361674995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115530024-6	26.1019742990439	0	1.2780649235379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120697851-4	9.99863117229083	0	1.29036596542427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92903838-4	9.34209348729391	0	1.29282247107539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99432517-3	4.8227930394563	0	1.30043150096114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43853417-5	20.5607613166086	-0.125470833124299	0.609264408997875	-0.205938228577433	0.836839163332766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10775210919789	2.0509200531463
Merged-chr2-153276314-3	5.00080708670011	0	1.31040630509999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112631640-4	10.3599370262494	0	1.28493897656791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69077442-4	13.8210413839358	0	1.29880957990816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184562955-7	40.2980445940829	-0.601311562881905	0.299238035540119	-2.00947570651087	0.044486708518407	0.341280635694274	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21759186437529	4.44262725643674
Merged-chr17-34637929-9	41.3281404291744	-0.335697949448082	0.301032489689458	-1.11515521063651	0.264783915687217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27754338520939	5.00120859866829
Merged-chr5-146757480-4	7.1391645218159	0	1.31022017058463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29885373-4	9.34216037079352	2.06590063571197	0.75153332459722	2.74891421058298	0.00597930336550938	0.0745655644508733	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.615449858980057	2.46859289591319
Merged-chr10-7142499-4	11.4974696193063	-3.60307833329086	1.01701713440544	-3.54279019634933	0.000395917548249932	0.00921026276537559	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57424979469292	0
Merged-chr9-45238266-3	8.91407857578423	0	1.33413699591935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166429197-3	8.28235284410026	0	1.30364921088963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70746966-7	30.056136464084	0.0954295004306889	0.35671264238682	0.267524862007007	0.789065074407102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66566918568925	4.79775261470981
Merged-chr10-53980106-3	7.19667061195252	0	1.3142258224565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117231444-4	6.92780635373432	0	1.29541152885862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115063101-3	13.3413594365806	1.86699893531098	0.453163346524858	4.11992485629807	3.78995981161969e-05	0.00146111335604779	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47824791942801	4.03415254056693
Merged-chr11-90224298-3	4.87397879586825	0	1.34511298763861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13407472-3	7.15724985731442	0	1.3236529859386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142021871-3	8.25923690477504	0	1.30700288608283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32395874-2	3.7894553734187	0	1.35794061629067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67733207-6	29.5408690913941	-0.341538294454944	0.356090851407711	-0.959132460451491	0.337492019583518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2297685914255	3.90226045886172
Merged-chr7-128633368-2	5.57886827819752	0	1.3319476152376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34391028-4	8.68313426251117	0	1.30478486036391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122376470-7	32.2846105022418	0.893229769272797	0.278337113089178	3.20916517154006	0.00133120994604492	0.0236576679723283	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.619357568958	5.57416472087088
Merged-chr3-60627778-3	10.0398577701493	3.65231032140107	0.845691602204751	4.3187260129808	1.56932458981215e-05	0.000725241051243738	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	3.34005910040985
Merged-chr3-103587883-4	6.93523756905455	0	1.29453604317992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75492109-4	9.33123027273691	0	1.31485740915884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98217119-2	4.41601998380081	0	1.37470235660597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103656166-4	8.83227003740121	0	1.33539911376557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99781562-4	7.34294678099036	0	1.30465189581809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106496147-4	13.151493526505	0	1.28802302277137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171735090-7	29.1771520099421	-2.25794686325422	0.468673549342566	-4.81773905615448	1.45194082662043e-06	0.000109055776156711	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94506512094087	3.51597107990649
Merged-chr3-146118211-9	31.8314685250352	0.477624545783285	0.301330904931746	1.58504998314551	0.112954978312096	0.679351680881932	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16544841346656	5.65069635630788
Merged-chr7-28726769-8	27.9361168977599	0.00213639969797759	0.31791984252523	0.00671993192060054	0.99463831042434	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14897670071363	5.02433295402735
Merged-chr9-62972506-4	9.35849919741164	0	1.30919487812991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90682065-4	10.6386067198179	0	1.32231770288107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171366111-5	53.8324780986448	-0.678700054285438	0.433738330945132	-1.56476844646523	0.117637212796668	0.70010212271503	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46885393001113	2.11039133983348
Merged-chr4-139252129-8	30.028619132856	-0.786624799007713	0.36425301351153	-2.15955604985767	0.0308070538787916	0.26205646221863	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10330121282087	3.92907347777492
Merged-chr3-89847835-4	14.2777416762469	0	1.29514566544842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177982750-2	5.99148876939217	0	1.30327195522894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36426319-2	2.53844977774312	0	1.39103553269286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62729966-2	3.18485280416193	0	1.33780264165328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133623453-8	20.8088410502451	0	1.28589845551608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114748137-6	21.7543522806985	-2.26497367575733	0.482719188732078	-4.69211443967364	2.7039579496181e-06	0.000178117778402968	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1246129349026	2.95117408380301
Merged-chr10-8890660-4	15.302456915279	-0.609627446870389	0.385449492625893	-1.58160137328829	0.113740600328283	0.682754684243095	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82525181915024	4.21069731060171
Merged-chr4-59362745-8	25.2008198687188	0.665469922174129	0.295164027651686	2.25457664156633	0.0241599149925695	0.21709403904151	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32221796998991	4.87637186555259
Merged-chr8-36122822-15	178.077360549959	-0.277959475938656	0.146569543755219	-1.89643406684042	0.0579026707301991	0.413655616216857	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.56582051687066	7.32686790144763
Merged-chr2-102917706-8	24.5064685389424	-0.806930446794406	0.313179209816177	-2.57657731261293	0.00997838879063697	0.110760624072187	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40045334895875	4.51929038775556
Merged-chr5-105654742-10	55.4187551422352	0.440511978921525	0.263284226124162	1.67314231242165	0.0942992835647991	0.593419182790388	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06395641089471	6.50836900267083
Merged-chr13-58999806-8	52.2713832211857	0.38424953696111	0.273567484657312	1.4045877471237	0.160143902261797	0.868647647397548	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50266906815744	4.90959652475478
Merged-chr3-88664284-4	15.5571598763739	0	1.30375084505411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31284632-4	10.759532178898	0	1.29803926349041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79455001-4	7.69180128445259	0	1.29298004386844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83830735-4	9.07853184137044	0	1.31009930483245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-48459021-10	65.375086294453	0.324042338317571	0.237000347612214	1.36726524489229	0.171542181269181	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78265858135366	6.10577000520321
Merged-chr16-50225138-4	10.595393178502	0	1.29004823574101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148489113-4	7.50322801185525	0	1.29122394630889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79307185-4	8.41065589938418	0	1.30807739545958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33180113-2	6.9366111557888	0	1.32281675125077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-61994456-2	6.93192524571604	0	1.30717430144595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113447509-1	4.76756455818691	-0.597319571697878	1.16223525966477	-0.513940328974504	0.607293710329681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12891688782016	0.73596151290311
Merged-chr13-58066995-1	4.19069608977895	0	1.33020337118316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81084019-6	40.5008402699572	1.67210036621921	0.352407894547501	4.74478691337555	2.08725939524323e-06	0.000145100055788898	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24156228736552	4.90878065898601
Merged-chr10-33986990-4	6.25267577208298	0	1.2949422568612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26896076-1	3.70373321055928	0	1.3167851413859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102895284-9	32.7607372193433	-1.54774719067364	0.346840565935625	-4.46241686435521	8.10403740494217e-06	0.000428105439178133	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76471697060684	4.06495676151878
Merged-chr7-80583139-8	53.5354595635619	0.935401024754037	0.249729834413582	3.74565188396714	0.000179925949227031	0.00502884562796816	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6459744246668	6.56550762793331
Merged-chr17-88517783-4	8.41091130480141	0	1.30206088523032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80420863-4	7.47709602967481	0	1.32633383851517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116436336-4	10.0424152642525	0	1.29081847444408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25993531-4	7.27797373366206	0	1.29935153266166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23993689-7	31.492079793333	2.32391967604649	0.379403434896051	6.12519408708884	9.05731315039582e-10	2.34864756002288e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61979739126073	5.07664176041873
Merged-chr3-88396024-3	7.05695178190246	0	1.29294746724996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88420852-3	7.78089196072919	0	1.30047734524283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96568520-2	6.40617616939047	0	1.30585623454222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101981503-4	9.73089359596125	0	1.29608955081694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117988314-2	6.78552952335558	-3.08779412524928	0.932151237655195	-3.31254629132559	0.00092450824877909	0.0179533182837202	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67322017102732	0.918668513615376
Merged-chr5-130283167-4	10.7544105701507	0	1.29819625302911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194985993-4	8.1369277597725	0	1.2905486405701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43042937-3	9.32285552587288	0	1.3075432763218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117119039-2	8.54747351449362	0	1.2904004770538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86679959-4	11.8044267654413	-3.48231655379491	0.773471496777932	-4.50219118390436	6.72564388171342e-06	0.000369944381392631	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39189582993376	1.07938469868934
Merged-chr1-171845650-7	28.7059491865122	0.253393869760872	0.308289289957434	0.821935364007807	0.411113684644656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30366114687833	4.52395165763937
Merged-chr4-99368259-4	11.135679282138	0	1.3092474853001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106959778-4	9.64514299067368	0	1.30096002700102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125729932-2	6.96012734135998	0	1.3273528758425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97546087-2	5.46374129743239	0	1.31117558613149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67869358-8	44.8744919770888	-0.540784233876027	0.26169400221645	-2.06647546101855	0.0387836071199174	0.308916819948577	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25760784379376	4.70773866556716
Merged-chr19-16085279-3	6.63616354299705	0	1.31007745541641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37842974-4	7.17160527106297	0	1.30661228906957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3350570-2	5.15169894081176	0	1.30886620809241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117087590-3	7.01604487541993	0	1.30162676870995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69679547-8	28.9112187169581	-1.57373337528905	0.313357008057696	-5.0221738618314	5.10899030938759e-07	4.72815865568059e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.850078348827	4.0816102654889
Merged-chr16-38131888-8	42.4412690620002	0.686261993314457	0.294279396056127	2.33200829725629	0.0197002546685436	0.185147827063232	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59906343675962	5.37369483942467
Merged-chr2-116890496-4	9.69483355956407	0	1.30896207703118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4873265-4	8.87646391646919	0	1.30666447707913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58657544-4	7.03263055725625	0	1.32495119729303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47004288-4	9.49659496113969	0	1.28884421949058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9678189-4	10.1180851923643	-5.55893695266425	1.00068756545681	-5.55511744579998	2.77425165489152e-08	4.21595927071026e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30798129152695	0
Merged-chr18-63881609-4	15.1326032934377	-2.39626655372115	0.698491118608719	-3.43063281676957	0.000602175100708434	0.012697558609517	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58997689084445	2.09227966392264
Merged-chr15-62450348-3	5.05521681513996	0	1.33257577099628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131353784-6	24.7013706201512	1.41669971032737	0.411346339875261	3.44405570925217	0.00057305761229676	0.0122256032429462	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09907400591973	4.41924566150178
Merged-chr4-7457647-2	6.31341786034505	0	1.33715649569248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78160737-4	11.660706483271	0	1.30234510435726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50449274-4	7.54058327383384	0	1.28867761601373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10849713-6	21.693274280731	0	1.28584173672518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141658925-9	49.2980569237194	-1.33705949886227	0.295675992089623	-4.52204282604381	6.12456639202799e-06	0.000341734295568607	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25659576350567	4.78208992747843
Merged-chr16-93918545-7	24.5838696048598	-0.822950832223098	0.391479559565068	-2.10215530317188	0.035539673726092	0.290478488968756	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55068900462037	3.44742352238
Merged-chr12-25142447-8	34.7321377924828	-0.440543574717503	0.277553227920011	-1.58723996121013	0.112458307319332	0.677362019549181	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70421402679037	5.01768233856571
Merged-chr1-155471574-1	1.6178756209568	0	1.49716351830445	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191270297-4	11.5732817295639	0	1.29598891074249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8653632-1	2.55351170380907	0	1.35629236102668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103816838-4	10.4348247811271	0	1.29323171576403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35983671-4	13.8337609686701	2.81886448723055	1.11595617656093	2.52596342619611	0.0115381492390993	0.123683054491172	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03295826569721
Merged-chr13-28481155-2	5.66480225758549	0	1.33084012076786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31168599-2	4.89484471058346	0	1.32519201028945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184626629-1	3.31394002289559	0	1.34953322486625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-117301167-2	3.59201082645546	-1.1744044886351	1.39236030374168	-0.843463064466238	0.398969514451459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	0
Merged-chr10-94472028-1	11.9911333532495	0	1.30614573730366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81622695-1	1.34924000737979	0	1.47448675772377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26913700-1	1.84463060475446	0	1.4333640614605	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39244214-3	5.38710412765008	0	1.34180045523893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85369239-1	1.92173619283885	0	1.47339421336358	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23718053-2	7.3909882038135	0.853864482826628	0.738120331962332	1.15680932478392	0.247350271257947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81243733445542	2.73240758328545
Merged-chr14-122296631-1	1.63847952323444	0	1.47451199551229	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34592802-1	3.3393956634401	-2.00235409401074	1.02561353533118	-1.95234757053412	0.0508969532130295	0.375809299961427	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85067227597037	1.42436654726916
Merged-chr8-122932589-3	16.943123533075	0	1.29356592326227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-93184290-1	1.30625969406035	0	1.54434137927129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26115818-1	6.40270368620828	-2.30480266417684	0.731423844202661	-3.1511177581165	0.00162646900097713	0.0276060372306109	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5978081891215	1.96334085054552
Merged-chr6-33982889-4	7.9899726173326	0	1.29025556974495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48998292-6	18.0566285647232	0	1.28414332942247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23591834-5	25.5834953260722	0	1.27921204791242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170153817-9	37.2313010157384	-1.18112408651382	0.337539177722326	-3.49922072597293	0.000466620132369815	0.0104638844096904	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14562161656378	3.88457774098333
Merged-chr14-77240205-3	7.94577855697213	-4.81897935690819	1.08647969599437	-4.43540673118404	9.18986136188082e-06	0.000472728112749366	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48019447498372	0
Merged-chr1-64304218-4	7.57700904944698	0	1.29198021780892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165445148-5	22.1449932432319	-1.59457915184256	0.460946971467562	-3.45935487278665	0.000541470985950733	0.0116891189454696	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55215417274833	2.97864699050518
Merged-chr13-100681831-3	10.1751714776396	0	1.28857894750613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59216384-3	7.06269681726108	0	1.32584559898815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96580102-10	41.8507753438817	0.208377994883727	0.340591367168819	0.611812321069315	0.540661936896496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16462492382027	3.48651283247
Merged-chr10-117856386-4	10.7090011657332	0	1.29533155703846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106261269-6	37.1846750820756	-1.84505432323057	0.404509510232925	-4.56121370834557	5.08587850172067e-06	0.000292812173192457	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56421289193809	3.58943000452715
Merged-chr18-38631764-8	33.8233160669771	-0.097418442947788	0.289352295390444	-0.336677622744738	0.736359933996099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81297425032848	4.77890874217056
Merged-chr11-107675900-3	7.6467222402594	0	1.30775998812765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11637278-4	8.56327306340667	0	1.29756589009427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41073990-6	26.3479294733039	0.811844849919526	0.337379990935041	2.40632186772404	0.0161140604228584	0.158296661514147	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05669943967371	4.81813313105997
Merged-chr5-62677576-4	12.3381429544491	0	1.29270881054496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16042840-1	4.37862133440878	0	1.32686525966525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47688679-3	16.925257640432	0	1.28253102260047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-138095325-3	8.85491963470541	0	1.33992624230035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5607688-4	16.5504125958424	0	1.28656154702175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-14739170-4	9.73269344769995	0	1.30341093380426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120873117-1	4.37077115079365	0	1.32698175219068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9107579-4	7.03906263958121	0	1.33513645523907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89354095-4	11.59264442465	1.85906782134595	0.614090528736378	3.02735139910296	0.0024670698050213	0.0381840699855334	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74263844973869	3.3730050033201
Merged-chr7-132714352-1	3.21227532777507	0	1.39003015952173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36107690-4	9.78771100154399	0	1.29652046062761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95511989-4	12.1820515393622	0	1.29135435073291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-27384075-2	10.9452915908405	0.230812191828625	0.531741673049399	0.434068276998071	0.66423886099136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40385320477159	4.38464233674334
Merged-chr6-26304380-4	9.67405211668961	0	1.30902409096425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58758420-4	9.56947900986845	0	1.29623635574186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33912772-4	8.43539603006463	0	1.29171239165008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-54467728-4	11.8495119922134	0	1.28614648017308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20392126-4	13.0369168423223	0	1.2881871462681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120498723-3	5.22173021610433	0	1.36722358986239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121848075-4	8.42302586608558	0	1.29204469669689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149827173-3	9.27699634375944	0	1.301211104101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135707634-1	8.00349386412821	0	1.30083155132734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102432951-2	6.46965958199589	0	1.32273320609705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127282583-9	61.7280317632094	-0.310631728703193	0.22075516848241	-1.40713230335055	0.159388160865936	0.865567918220346	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.96544856535573	6.6459399151622
Merged-chr2-93217239-4	13.2474147235552	0	1.29820362255682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136071533-4	10.3280190327456	0.121643954768551	1.2910852032075	0.0942183788229821	0.924935685527149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr7-84611776-4	10.7137722217684	2.85034664277382	1.06236492942129	2.68302027282331	0.00729605674022792	0.0867090345266224	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.41695929335733
Merged-chr6-8686895-4	7.4615741738555	0	1.30061206248512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71301516-4	9.34328590031686	1.31601382980834	1.29687718601801	1.01475594142348	0.31022218045722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr6-148989696-4	9.15342256174676	0	1.29757341122947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8124327-2	4.09080709932396	0	1.34602551465914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80042343-8	26.9028854072192	0.451237161016914	0.299313626715478	1.50757306297268	0.131663831243727	0.75716841647915	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46739984276276	4.87660788956829
Merged-chr4-140952425-3	7.10184043568011	0	1.28573739091279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69083169-1	5.88185018255958	-5.56362818278888	1.07187464946365	-5.19055860269932	2.09664119290435e-07	2.27706523422823e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37862605990782	0
Merged-chr14-20253456-2	4.98144438009079	0	1.38458699008945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32834216-4	11.2404113669458	0.212342404846291	0.380177423189138	0.558535020478191	0.576479097531905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46849818852709	4.74382564273129
Merged-chr14-69853093-4	8.19824096989711	0	1.29317606629339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10480954-3	7.44290131091113	0	1.31146783221241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160214240-3	15.4139521307674	0	1.29824416384827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71747286-6	31.1859222320097	-0.358885659070059	0.37607712192431	-0.954287400503692	0.33993818396047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49610425518784	4.01756995255684
Merged-chr19-5648933-5	38.5150132126912	3.75848751952321	0.645238757079464	5.82495623253509	5.71275691852562e-09	1.11434571223276e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03122919606393	4.28523866924323
Merged-chr7-66359205-4	8.06293364599241	-5.01153352467232	1.05728176104718	-4.74001700332809	2.13700284827458e-06	0.000147260163561869	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76479402464341	0
Merged-chr5-43185006-4	8.95742383611054	1.49452603109734	0.827679941224119	1.80568110529171	0.0709681656992132	0.480618277104445	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.914032537518954	1.86333058947232
Merged-chr1-193191942-4	16.2875099559932	1.45117280700803	0.662475611361907	2.19053016008353	0.0284858099443342	0.24622139373313	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2005489260835	1.7084981770064
Merged-chr13-37873687-4	12.0580218921638	0	1.29716585700703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122521502-2	2.36016567801119	0	2.13339991915572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3906650-2	5.08053508658046	0	1.3133547336048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111694507-6	17.0299296834142	0	1.28162881348452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99853387-2	5.66765995319158	0	1.29594573252383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16885364-4	9.72021149245005	0	1.29541916899699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106308613-12	45.5805307170466	0.97419464664241	0.278323376332473	3.50022574272985	0.000464864310136679	0.0104352535933327	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61660945835491	5.63537645038424
Merged-chr12-25101144-10	65.6509166395902	1.16096473512722	0.293121628548553	3.96069283892817	7.47326130509356e-05	0.00251855458093163	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90165722885491	6.01883221505752
Merged-chr1-61042884-3	5.43957010087757	-0.990082343513976	0.64392317013131	-1.53757837804171	0.124151737524278	0.72675978144419	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66112565195373	2.43227213747251
Merged-chr2-34600056-3	6.98258739815217	0	1.30729305010741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58126813-8	69.8403861389892	0.91539841975726	0.213284322002502	4.29191612005368	1.77137867875082e-05	0.000800878184203154	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38619246381328	7.29477153961718
Merged-chr13-58593351-4	8.72803876461845	0	1.29923488168639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67977676-4	10.0397482957826	0	1.29141668251052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144589276-4	11.5795730069222	0	1.30423465689466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30674093-4	11.8363312513011	0	1.28998441986238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55291996-2	4.25431028321891	0	1.33123630894613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10430098-2	5.47939931151335	0	1.31396216226605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-101042477-2	7.04265949023588	-3.97695920910052	1.07042495918603	-3.7153087425434	0.000202955729915682	0.00552597713627922	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79555515188193	0
Merged-chr5-65086684-4	7.81401136236234	0	1.31205953791005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106076482-4	9.8849841401732	0	1.30136551303922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45298271-3	14.026430634252	2.223713466812	0.497535571269242	4.46945624639295	7.84186979045474e-06	0.000416150806834497	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42111881503594	4.3112316743891
Merged-chr13-42282747-3	7.62222704052079	0	1.34882974328702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92987928-3	7.94492396260603	-0.721846853921517	0.553083141660923	-1.30513262753551	0.191847690380916	0.988589104882748	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08411960878368	2.95878273343305
Merged-chr5-120526426-3	9.70226878046209	0	1.30514087412824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115279986-6	28.4882759545205	0.372901088423778	0.410718018988684	0.907924832083036	0.363917936906214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11104386686594	4.00397722079068
Merged-chr17-84072054-3	8.92405560784651	0	1.28477007695759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20702127-3	12.9060877134266	0	1.29992615729311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69526429-10	78.9082529410797	-1.35545995282737	0.23587695816283	-5.74647037754181	9.11255862999063e-09	1.62696518097095e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.56547640399282	6.18751345066368
Merged-chr6-108532225-8	41.3405905304365	1.11639579188751	0.315073590606236	3.54328583915725	0.000395174128838692	0.00919624238714143	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12403322843265	5.23354170675495
Merged-chr7-101360631-5	16.5150348723687	-0.670789023055219	0.600465122050658	-1.11711571317314	0.263944852834379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8283479426777	1.30807038797559
Merged-chr15-27723983-4	8.60492243749309	0	1.30137246990228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150156391-2	4.39493030971171	0	1.33930034558841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25395595-2	5.27434167614707	0	1.32455688180737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76497795-6	34.3901858481264	0.423824134713013	0.48980359428633	0.865294047771428	0.386877416957497	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90340616599718	4.30117910058259
Merged-chr1-184738093-3	6.67736022933768	0	1.29393996078298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20398555-3	5.72976965966441	0	1.29303047493517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64488197-8	32.6826541597824	-1.56809246132266	0.385037613045181	-4.07256955735037	4.64973077326854e-05	0.00171582995991983	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58257924093065	3.32224368052796
Merged-chr4-132514084-4	7.94113973905021	0	1.29265530110071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182539519-4	8.36263983494891	0	1.28980639512303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66939014-4	8.39980472820731	0	1.29813830583367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70385709-5	16.6935665046395	-0.0674127828999422	0.433882514448281	-0.155371052428013	0.876528803829915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53688880107848	3.3719626198815
Merged-chr1-191107205-1	6.35070930774866	-3.54401890811207	0.90420716636802	-3.91947668624164	8.87414445250008e-05	0.0028764377152434	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93927325462221	0.581381506691384
Merged-chr14-64833944-6	13.3853906012	0	1.28428067120333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35099146-8	29.8430122168467	0.928114672044923	0.434421913096376	2.13643613285921	0.0326438815317843	0.273428385099672	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07731409392303	5.29531457461328
Merged-chr1-152613812-4	11.5134268909834	0	1.28355339744601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34194688-4	10.5731164729408	0	1.28938928191523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109352510-1	3.21063236010078	0	1.3230478689263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165618543-4	14.3199207829617	0	1.29616286196382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11049084-2	5.01701244948528	0	1.35176913314589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75317348-2	4.38063743387694	0	1.33667663716433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98993394-4	6.3641045983848	0	1.3085451027059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33158411-7	21.4556598801394	-2.07865087012034	0.50338494638959	-4.12934650713927	3.6379577772634e-05	0.00141251330310787	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84512280201997	2.33663341065991
Merged-chr9-61013143-7	17.5813653158672	0	1.2783585115803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21613236-3	12.5500372803456	0	1.29912671619352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88255076-4	12.1370732362921	0	1.28873781531572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137879776-11	86.3731573319847	-2.31026416295761	0.26767097959175	-8.63098482503113	6.08259545166722e-18	1.98736641192323e-14	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.99918885050831	3.79042731165911
Merged-chr4-150012721-7	27.0197735576322	-0.453492480877151	0.351560353927602	-1.28994204212953	0.197070782084858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92596711667415	4.4684946869868
Merged-chr17-87055127-3	12.5176857170471	-0.0417474324865971	0.569562402359495	-0.0732973811362062	0.941569475646919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74167000356799	2.6960750002622
Merged-chr11-101658512-4	13.1715423996076	0	1.30537143369616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76326611-4	22.1453903758566	1.14015310245459	0.4178120890556	2.72886575644983	0.00635525694810039	0.0783271634346601	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7637599665476	5.8090675101402
Merged-chr3-79158436-4	13.3218434979863	0	1.31171994729301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71178678-8	29.067888140573	-1.0838072944798	0.293262043941952	-3.69569576721059	0.000219285434789518	0.00586880615786086	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38393721439033	4.16905881847871
Merged-chr3-95676971-4	8.95738397564656	0	1.29548515178016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5422612-2	2.43797850282169	0	1.55556086508312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93411164-1	1.58251598173016	0	1.58022436185007	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53127759-2	5.62865846277695	0	1.31911700209076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59735280-1	3.75310288072473	0	1.35319066590937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142342030-3	8.45070038699415	0	1.30862385516455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96638917-1	2.42159923651942	0	1.39610143705158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23567246-2	2.51634596085581	0	1.51736191078114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45264994-4	13.3627766995633	2.02598479228717	0.836654263154859	2.42153166667386	0.0154552544116348	0.153299795807937	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	2.11086637835816
Merged-chr15-83415534-1	2.96072299279583	0	1.31840617841679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117509755-4	9.15917895368067	2.78982004307673	0.940049189225903	2.96773836417438	0.00299999571726508	0.0443524253711322	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.77777167463237
Merged-chr15-63270559-1	3.08759156432184	0	1.35106081489513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93818190-6	13.4427111539333	0	1.28561704437677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77276293-4	10.7338283260561	0	1.29537283383655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66742745-7	23.6585722522052	0.274487182019135	0.41991480614321	0.653673502347337	0.513322178195733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45887365377902	3.87691512868838
Merged-chr1-45864707-3	18.7165797879937	0	1.31443785178387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30643426-1	1.14155768872539	0	1.87423954347147	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88837588-1	5.33388200649743	0	1.33794289007289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32146789-2	3.13053776007884	0	1.46344305920946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64077768-1	2.85750242779136	0	1.33104097131556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92034515-4	26.8352368734627	1.61001625271024	0.66311267198616	2.42796785633414	0.0151836889170405	0.15104176221235	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.965429723541064	2.31917258558244
Merged-chr19-37689204-1	4.06655512645668	0	1.34937913807101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96416828-4	11.1690889511317	0	1.28986741727025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67115741-4	8.89272305751852	0	1.29064545438142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45644642-6	115.886756224545	0.300014004278519	0.288048999654112	1.04153808775165	0.297625885813466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59342374930064	4.86800163343593
Merged-chr7-19467756-4	9.45904207055367	0	1.31197784930946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121791670-4	11.4961828101883	0	1.28640258615595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64311813-4	11.8333041471989	0	1.33293910994056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19570421-8	36.2056321384734	1.1509348800041	0.325087817709062	3.54038145174092	0.000399549090225385	0.00928482747150356	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90087408970794	6.04082561662198
Merged-chr4-87826544-4	9.3019988965172	0	1.3033843692087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90084051-3	11.2540999690082	0.64710413511095	0.695354926430836	0.930609837529229	0.35205542388586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89846764840325	1.72678076939999
Merged-chr2-52885068-4	11.7986683102966	0	1.31180159262694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64628342-5	16.6499641484663	-1.86367752451505	0.427375857058689	-4.36074591892335	1.2961981137736e-05	0.000621433323130223	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0507616566053	3.14583815693915
Merged-chr7-19202733-5	17.6962015857288	-2.04345760562523	0.676513742229283	-3.02057072616371	0.00252298776549543	0.0388105363757214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69027295867516	1.32643090402693
Merged-chr2-129489828-17	100.512592498636	0.608752091920053	0.192614364948655	3.16047088223315	0.00157514348048256	0.0269491675935531	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.57376235824251	7.15729118702316
Merged-chr6-136543340-6	19.4723948350757	-0.222477625996657	0.464579446383758	-0.47887961408625	0.632024274395699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84486894387974	3.21837701399511
Merged-chr17-35218872-9	27.9431820591024	0.0613219191960055	0.514605518162103	0.119162964701612	0.905146247419633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39778333343675	2.38099347700105
Merged-chr14-60990292-3	8.74668461359797	0	1.35262561660479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13442407-6	18.1862575560099	-1.56015740731272	0.42297902139915	-3.68849831405812	0.000225581520641134	0.00598734770423051	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55055229221744	3.70648213805822
Merged-chr6-32544299-4	7.6996085763867	0	1.29710209783055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98774719-1	4.55877667968729	-0.97814581535142	0.70920232032162	-1.3792197054683	0.167827024216103	0.897301973852519	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7242770630528	2.36453465698696
Merged-chr5-5320007-4	10.6464795503694	0.504899686506259	0.71636976090542	0.704803181346064	0.480932728477313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43993851148917	1.87496859647037
Merged-chr2-130491801-6	27.5890293745061	-0.049359378579102	0.308883347500031	-0.159799416118077	0.873039084041459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09161866107234	5.05640812046989
Merged-chr14-30671251-6	29.6374664868786	-2.44946941673158	0.398712983642176	-6.14344031226695	8.07530254577231e-10	2.12777709740338e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78879317089493	2.79576564368745
Merged-chr8-25070173-6	21.9906280388436	-0.707030052050746	0.359593862906897	-1.96619054156051	0.0492766046433698	0.36678767593412	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5104209190291	3.84169146245495
Merged-chr5-64835474-4	9.83956825885674	0	1.29219589799857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11989488-4	5.52122082817277	0	1.33256680322286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80026255-4	10.35378490719	0	1.28553966580834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143142024-4	7.9442516879848	0	1.29122849685023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89078995-4	17.6119867860868	0	1.30381003783051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139213270-8	31.743205878056	-0.40914401553595	0.311838462991998	-1.31203832782632	0.189507202774785	0.980097955878205	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92796821397769	4.0271645263352
Merged-chr6-30157102-3	11.6109526236524	-2.90029264114944	0.595055290902875	-4.8739884939916	1.09367362398078e-06	8.58980728757792e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84226992760779	1.48233004913473
Merged-chr1-4907193-2	8.17659214455985	0	1.28488063290995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102692754-4	7.82659785653246	0	1.30291491733692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25832739-4	8.67304512580077	0	1.30168735803117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36194042-4	13.6419920084678	0	1.28615624215354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19705860-4	5.73272238516564	0	1.4274805077213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98084882-4	13.9607761747217	1.43190635412687	0.721922927883805	1.98346152867629	0.0473159002313317	0.356388923070952	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30291351005996	2.11197723984608
Merged-chr9-55170972-4	7.8119768617128	0	1.30151349583713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17218347-8	55.550241011355	-1.0971170227259	0.30484923204267	-3.59888399709773	0.000319585695931639	0.00784804467732013	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89488224582626	4.72356420727285
Merged-chr16-30948346-12	61.7217631703726	-0.0303562795155303	0.270841523421041	-0.112081334989168	0.910758916686679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19003588288915	6.14250216364411
Merged-chr14-45663709-8	34.2744483376693	0.231366452047363	0.326324849856802	0.70900653796023	0.478320419649362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59380644099525	4.81672673822288
Merged-chr8-95255024-6	32.538856571676	-0.788591446579615	0.371699827670695	-2.1215814156316	0.0338729043783635	0.280535819321329	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31129087756199	3.59734910775349
Merged-chr7-99159074-8	37.4743480689489	1.05360586391963	0.294457144021153	3.57812973912407	0.000346061671496056	0.00833840191208749	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64623505113475	5.68797644232574
Merged-chr1-177260585-4	10.0421403524003	0	1.3053987616947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34111415-4	8.71165637469436	0	1.33246933214896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84707478-4	11.9027890604483	3.96081018844565	0.970833085017987	4.07980552946676	4.50733925300693e-05	0.00167922799787338	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.72942046393685
Merged-chr4-16160217-3	8.76857966516665	0	1.315794463068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148561281-4	9.75062981996728	0	1.2960909766005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4599961-3	5.72185365592606	0	1.33025950208865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129893519-6	32.0902683754517	0.557957964023704	0.545517854033003	1.02280422152773	0.306400421642233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0617945879368	2.77383438114867
Merged-chr4-62266276-6	18.7242356397126	-0.276230990996128	0.624250397658547	-0.44250030441666	0.658127210062873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30126737039491	2.52449471409698
Merged-chr8-13504240-5	21.8272810039348	0	1.30032841174596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14086384-4	10.1559800354812	0	1.3329376492773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52454084-2	5.17798462073606	0	1.33962049889531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78607648-8	73.0144016752374	-0.356247184655655	0.285802558013832	-1.24648004248588	0.212588211664966	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99381205531256	4.62289104419417
Merged-chr10-99211153-4	9.87212414191608	0	1.30418694796819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144244498-1	4.65485795427806	0	1.30866569155174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150015485-4	23.7646283958334	1.04412171464429	0.340144783067142	3.06963906730912	0.00214317601688468	0.0341757183671793	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17118791679937	5.1256218581353
Merged-chr5-121996960-4	8.68049209036593	0	1.29886215746216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47687833-4	14.1585841024476	-1.90472662222378	0.549067717559695	-3.4690195058075	0.00052236152711362	0.0113551881064107	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07881955304312	2.39776663243502
Merged-chr2-155585636-8	23.1471378352343	-0.807927184715819	0.366274930924835	-2.20579438149322	0.0273983998777709	0.238939788924705	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81157539904072	3.70200728481631
Merged-chr2-72366150-4	7.67890579562325	0	1.29776236078597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20666776-4	9.69174703991717	0	1.30246248928165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103746403-4	8.68660283694207	0	1.29845138227328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118649637-8	34.2156965447076	0.391585157269053	0.326963523339794	1.19764172244407	0.231056525998908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4054808080236	4.76747344460688
Merged-chr6-49031433-4	8.33048841507517	0	1.31810295409236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95679320-5	20.6859880466182	-1.59981481334216	0.418709944048253	-3.8208187698494	0.000133009367417206	0.00397786275663374	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26620633924352	3.62577457863467
Merged-chr14-118691946-6	19.6428347500794	0	1.28018430288824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38812705-2	5.4179978026225	0.279747599031738	0.818561214702186	0.341755257892982	0.732535083306131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78772961153436	1.76628008406346
Merged-chr18-52683226-2	2.73708929685677	0	1.37635387760014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90677833-2	7.54965272989643	-0.782704599629132	0.843917357574609	-0.927465933250382	0.353684671502185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38916874767253	1.41695929335733
Merged-chr11-21102792-2	2.42762607157998	0	1.49004949839645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23717711-2	5.08933334475504	0	1.39052782386107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130785115-8	24.811143173874	0.508352696665953	0.325846364667234	1.56009933449802	0.118736408817147	0.705417451233436	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95804186963868	5.42476166219601
Merged-chr14-76959088-6	35.3933292478589	-2.04074122622563	0.34609052309619	-5.89655332936822	3.71172833866007e-09	7.72441401331468e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.24657111885166	4.13837516859103
Merged-chr12-85818587-4	6.15730482810754	0	1.31273431817501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13311589-4	10.1444566776397	0	1.29902981354871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-22108091-2	11.4075647023892	-4.9502854969777	1.02890807239258	-4.81120289538257	1.50024622161191e-06	0.000111784594751941	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45173092840068	0.306240821987646
Merged-chr13-104611509-7	24.4725678902951	-0.933004780470691	0.381249694123833	-2.44722761709979	0.0143959892168012	0.14535233488274	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40845251866709	3.35155957265927
Merged-chr9-51977536-6	24.892824275968	-1.39104536533423	0.561325190995134	-2.47814526703877	0.0132067362905812	0.136572967354681	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51351870899575	1.9895274255015
Merged-chr6-66958662-4	7.06151328358692	0	1.30092792883027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77488159-5	17.9820266180061	-1.18570544388961	0.513101552000656	-2.31085920373147	0.0208406330927142	0.193444887794958	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2450937777183	2.92269452602859
Merged-chr11-45595538-3	12.5069659300063	0	1.30174878829289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55586192-4	10.8438289053589	0	1.2915934643199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73395009-2	3.81896381458631	0	1.33261517661714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53496806-1	2.73852001922808	0	1.35886900716799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56734195-4	10.0849415738703	0	1.28982801218419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40536326-5	16.5902152088156	0	1.28089409581238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32562860-1	3.975804476196	0	1.33705838193874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47636681-3	14.1424067599081	-2.45011136369502	0.513415179013588	-4.77218333981156	1.82239494707983e-06	0.000129723551429062	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5127326769088	1.77199277292191
Merged-chr17-29494583-9	33.7380268946101	0.279438951905636	0.60475847546154	0.462067028812409	0.644033253551721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73087165498236	4.44065710654327
Merged-chr6-134556299-6	39.4760586219313	0.41840450846196	0.339634154001614	1.23192707073851	0.217976328071607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08767892175701	4.50847030541057
Merged-chr17-4742493-3	6.9625433444298	0	1.31171528522269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131384647-8	39.1911269467808	-0.301764829000076	0.340453793524647	-0.886360600879103	0.375423242888948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67042338432639	4.38136216026092
Merged-chr19-45805176-7	38.3122886593584	-0.584827648510779	0.276574439480782	-2.11453975865842	0.0344691927001443	0.283895117996424	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98455595924613	5.33954128310951
Merged-chr3-75499122-4	8.32824216719998	0	1.31297101072503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21493092-3	6.50166710056877	0	1.33208856818207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102646456-4	9.01047477148261	0	1.29675651636403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72147392-3	9.0193466477007	-1.71779121653014	0.671415663231497	-2.55846163651064	0.0105136419936829	0.115311253729305	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7948200020928	2.08628700317133
Merged-chr16-87655238-7	41.0462688084411	-1.68369503483674	0.32350650601366	-5.20451676717019	1.94502063336388e-07	2.14332745881612e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75856149885729	3.83606574038098
Merged-chr13-40922486-4	14.464095119158	0	1.29539320240278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19235255-4	7.62761250136663	0	1.29856923462599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53968635-3	11.9637767090176	0	1.29999033598744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191964395-4	10.571025424736	0	1.29570209250274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32562676-4	12.035009893865	0	1.28600016049318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191153273-4	6.74727041837947	0	1.29962521444464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6695478-4	23.2506854359359	0	1.29751516992452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150143740-4	7.55689860106185	0	1.30690267415971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150779378-3	5.91247637480175	0	1.34652633610763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55642549-3	12.9481933708492	0	1.30048753197229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44009077-3	7.03080539324351	0	1.29441573429361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34710458-4	9.30204836068581	0	1.29755970811118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52019813-4	9.0633814331461	0	1.31303860948802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14109880-4	7.62868022616171	0	1.29233387577586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80828552-12	51.4256335000327	-0.995554016848049	0.239730135625214	-4.15281130280786	3.28415538650473e-05	0.00130385869160294	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06946355835896	4.99152119772781
Merged-chr8-35135838-5	32.854710459016	0.416583879574211	0.395832239279341	1.05242534143417	0.292604447119798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30139826707926	3.65049806320491
Merged-chr7-4073405-4	9.33126468380631	0	1.28704993867575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53516406-3	4.91854596659398	0	1.42435557462832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31155585-2	6.00845626540485	0	1.30336926884121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50896304-4	7.78037899026617	0	1.29336534221777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124710349-2	5.27915727571187	0	1.37700823876073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75794020-2	10.0640720243594	-2.27506160926907	0.604722108457949	-3.76216046585515	0.000168451908454121	0.00477970404248501	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31573690356337	2.01243752527112
Merged-chr9-120013618-3	15.2515482823615	-2.09684112489006	0.582067715008239	-3.60240066718076	0.000315291896315653	0.00776594958787888	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89951301528305	2.72875668119007
Merged-chrX-42058067-4	9.10359919569464	0	1.29719622230947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50038969-3	15.2614419641622	0	1.28530403116869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111370741-3	7.69550525868048	0	1.29303664758241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35647613-3	8.44940497917966	0	1.2957669946887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74913815-6	17.8501930695201	0	1.2907990594232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104057296-5	18.1393301004751	-0.387288953773471	0.290306179378329	-1.33407065120978	0.182180703197469	0.952421514386396	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38815463980331	5.00442531484083
Merged-chr10-93484806-12	66.5351941210022	0.815509612669482	0.262481684750195	3.10692006356789	0.00189047510230009	0.0311221472720748	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64257549561639	6.43851935745751
Merged-chr1-136430346-4	8.65416219671885	0	1.33086055914356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79168105-4	14.5994899425303	-1.13518729244356	0.428066528692967	-2.65189454524669	0.00800415365911396	0.0930229649312407	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31495731657723	3.84098078813693
Merged-chr11-109367017-4	11.3395173774353	2.83403990587148	1.14159015210563	2.48253710024055	0.0130450482830257	0.135351178961987	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr15-80563845-4	9.40158549396721	0	1.281951856597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106805056-4	7.71330965504746	0	1.29556389663392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83857339-8	37.2376974361952	-1.30611434487658	0.364117505788091	-3.58706825163388	0.000334416813210668	0.00814794969279056	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81970683270186	4.33721732041585
Merged-chr2-103627356-7	38.2800202686516	0.588530992199664	0.230080223352937	2.55793819922051	0.0105294803170744	0.115446211543547	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83307021162922	6.34733433596137
Merged-chr5-140795061-1	1.8925114925725	0	1.42791680557901	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24585058-4	8.67240707664667	0	1.29875320417693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84465751-1	1.84386845257139	0	1.61133610066165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76199560-1	1.2162201363107	0	1.59161137563568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-156210218-5	16.0853587308519	0	1.28048396858586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57555906-4	7.91830682307242	0	1.30249370258888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128741136-4	11.5921206295758	0.94217771195652	0.872905205870072	1.07935856679581	0.280427913811461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913467560099968	1.26501898168246
Merged-chr10-42615290-1	2.36773277023922	0	1.37141632145299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133182858-6	34.1292091824269	-1.07038371321366	0.352131217979244	-3.0397296762162	0.00236790578123568	0.0369379735451485	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80009674988595	4.70161661799014
Merged-chrX-75155797-4	8.49476313711413	0	1.29262267846362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91712375-2	4.25441028918353	0	1.34030462436729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56026839-3	6.41752417592559	0	1.3251332132018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13682855-6	15.4998346718523	-0.172071110497363	0.557927584262065	-0.308411190539988	0.757769467896557	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27375045959957	2.22392366263603
Merged-chr14-63443621-6	18.8121616843598	0	1.27941763468992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110679943-2	2.770376700791	0	1.69466151195945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56485907-2	2.27574995385098	0	1.59379137622757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43910825-2	6.59407964749836	0	1.30600308193903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84745776-1	2.08672637644792	1.93706794919395	1.01842234890464	1.90202812347683	0.0571674780105147	0.409595284126133	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	1.9272926343824
Merged-chr2-61645655-1	1.96102660450158	0	1.59702124135222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120742578-6	24.2691582203135	0.772529809025309	0.395919341657171	1.95123028289496	0.0510296581391155	0.376363887218808	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96688980509275	5.69578400889625
Merged-chr14-70778175-7	38.1741970505139	-1.19869821717212	0.278353592953328	-4.30638672364148	1.65942844620658e-05	0.000759894963180204	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71590089856327	4.50608206073554
Merged-chr10-20590299-4	11.0368524771213	0	1.31939616056206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152363570-4	6.53968907351723	0	1.30849838835103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29708234-4	6.12905099782092	0	1.31511798206468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131566302-7	36.4999330004651	0.255532379458104	0.367650384935307	0.695041784066317	0.487029116298415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60916125437543	5.80107014601779
Merged-chr7-97781003-4	8.27055562655041	0	1.30212066051032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67479504-4	10.3821209236985	0	1.29575519266334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105232630-4	7.33601784809154	3.37207657173792	1.07503225910666	3.1367212873594	0.00170848454199796	0.0286925291393983	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.61477032079243
Merged-chr16-90349882-4	9.22049732566222	0	1.30779625391769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171111535-17	102.787486504494	0.12356841872846	0.184696916686876	0.66903346815448	0.503474128825665	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.08877604478967	7.21846022647362
Merged-chr13-37791025-1	6.07406818206818	-0.26162736012949	0.780074846389727	-0.33538750972465	0.737332788705797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36462336162772	1.54311005189624
Merged-chr8-57800030-8	39.1983885705296	-1.1922146089656	0.336842375747479	-3.5393842782399	0.00040106156699834	0.00930652621152758	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30468167834306	4.11836502757663
Merged-chr16-21689351-4	8.21763991639577	0	1.29008455851582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123941580-4	9.15948531608442	0	1.29201600174842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56810454-2	6.10271699869379	0	1.3278185424434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110436305-2	4.69664717129476	0	1.34332056368098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131060545-4	10.8825394263679	0	1.28178182333477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95681563-3	12.2252775040798	1.90861943018407	0.660132316440547	2.89126798166071	0.00383690790143448	0.0533687917682284	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32032293314883	3.16823365037562
Merged-chr13-45105385-8	46.4786062684087	-0.727086862931019	0.268278536678799	-2.71019393475199	0.00672438775375267	0.0817054373664414	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27175314952009	5.48683619320532
Merged-chr4-137818566-8	34.3293288416905	0.92785550531436	0.322934740428329	2.87319817026711	0.00406339143716153	0.0555994355463396	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5950521667938	5.63184554210197
Merged-chr3-60538737-8	24.3496256075875	-0.608355079482683	0.357584921661005	-1.70128840068769	0.0888888450011361	0.567044826834854	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45565854203011	3.50062481041637
Merged-chr2-129328449-4	7.22389549953729	0	1.31266245838092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101562550-4	10.6369598809467	0	1.29466435459022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122520470-4	6.66454788073983	0	1.33960440730922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61578971-4	10.5228592510451	0	1.28364837287366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120509279-5	17.3367811593039	0	1.2851320114167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122269440-4	11.9822529887898	0	1.28384486040165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105891200-4	7.65495219764956	0	1.29561852851501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73179306-2	9.49969998853178	0	1.31668608080816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125409050-4	9.80899816845235	0	1.30417469382948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79622448-4	11.9170547548552	0	1.2939002353633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82793747-8	40.0795563288477	0.321967491130493	0.336378108020985	0.957159468625133	0.338486771277918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1781890442777	4.13255354998206
Merged-chr2-146959439-2	8.67946556004067	4.62868315512464	1.00846563454438	4.58982735412282	4.43612775204377e-06	0.00026376997641952	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.290685631813391	2.77249093293001
Merged-chr10-118096611-2	18.3671426729477	-0.512992239139622	0.485076251148965	-1.05754969022815	0.290260789266419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43998207270272	2.66171529289243
Merged-chr11-29318901-5	16.5470415700639	0.293455486727575	0.36465173594648	0.804755490785996	0.420960790890497	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13991818342679	4.32721480380302
Merged-chr10-93353780-1	3.94173605949989	-1.45266866772852	0.951857673298806	-1.5261406284556	0.126974845707767	0.738193796051577	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53442741278468	1.68807364458303
Merged-chr11-34066834-4	8.26099565325722	0	1.2927562220913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-89394284-1	3.93050712124186	0	1.3411007961765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160026087-1	4.33844796324782	-0.632322892636823	0.915032334836574	-0.691038850282549	0.489541126721691	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10733422213829	0.905469781553611
Merged-chr1-65107840-3	9.15299179159399	0	1.29538971125997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33968694-6	33.0627238855132	0.683411231695285	0.451738587825808	1.51284669964659	0.130318603420268	0.751350465251086	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89425263837668	5.05918156235269
Merged-chr9-64775667-2	7.65320784663045	0	1.33020524403347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80426630-8	69.1668357282245	-1.1900349144608	0.270137535001946	-4.40529271303311	1.05641129329189e-05	0.000528982776792736	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71711934156993	4.58102505072608
Merged-chr2-11524052-4	14.9350035874614	0	1.29643631184127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117121446-4	7.37038747750331	0	1.29325318798497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124047166-8	34.1051466000758	-0.585757391194519	0.304564851663153	-1.92325998222002	0.0544474076094626	0.39409839362516	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22144684730246	4.65317114989729
Merged-chr17-50576235-9	44.0388677244662	0.732348233813026	0.286867012414114	2.55291895589524	0.0106824349429056	0.11669502063136	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70369717048291	6.42352600074367
Merged-chr14-34549563-4	9.58662647583733	0	1.28936139106302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-98351528-8	47.3237932078201	0.709258657185656	0.207019109563111	3.42605404246237	0.000612418518454109	0.0128761584642542	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02111217551971	6.74061990738954
Merged-chr15-53157466-3	10.9204748686681	0	1.33203121513611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63668474-3	9.11246947631505	0	1.31150811086391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21812983-4	7.008793073739	0	1.29184288596105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191092388-9	39.1832877359121	-0.129172472097591	0.280065020853368	-0.461223153480565	0.644638511847152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48285873612849	5.21526550619201
Merged-chr1-64222809-5	17.9071563349192	0	1.27709113531541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73240293-5	29.5478545730518	-0.999822907502986	0.461908420864995	-2.16454791110035	0.0304223237235588	0.259459301232012	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19814950176028	2.35581482466048
Merged-chr3-8983884-13	133.950059163943	2.00268609585209	0.224537606637837	8.91915668755782	4.69852219605154e-19	2.44430291935629e-15	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89641844582013	6.90405874507831
Merged-chr18-53903703-6	56.8363539517186	3.08610333580222	0.63262912436894	4.87821887568118	1.07048098740649e-06	8.48050898882097e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59397587272009	4.80893118508525
Merged-chr8-22433190-3	7.51870169296057	0	1.29700046088874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63112173-2	5.38535600659329	-2.48379511402952	1.21004913886392	-2.05263987573388	0.0401075171810852	0.316912432613687	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27951327172882	0
Merged-chr3-135612921-8	29.7777013544565	-0.812353529974909	0.309103510436676	-2.62809545199692	0.00858644184156066	0.0985578128541407	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02557474088657	4.19496876540094
Merged-chr15-66476119-4	13.6117732483128	0	1.28659392913584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13380175-1	3.23261300079541	0	1.384569316609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32198925-2	5.91663526961733	0	1.31204275200754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117878070-3	5.32243353210765	0	1.36406998794802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80005122-7	22.4711710763855	0.0256019479192591	0.350811250532397	0.0729792670001465	0.941822616046218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26908549402792	4.26326342612877
Merged-chr6-4978470-3	6.59512486771985	0	1.34408999619252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70378189-4	11.3172668009528	0	1.32538789711972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27574308-3	9.55590447253764	0	1.34020320406183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40814099-10	68.7789379066109	1.62323455836666	0.256860764355409	6.31951151605486	2.62391395312741e-10	8.08784345193696e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25892319476832	6.83335790436072
Merged-chr11-62494945-2	7.88237123495179	0	1.33872325978962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59254592-5	35.5827213427465	0.949894311430286	0.439844926877502	2.15961183904898	0.0308027311477516	0.262053804137609	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32992860330442	3.56182420340202
Merged-chr1-120099653-7	44.4745680927274	-0.997480937591525	0.413223758846641	-2.41390025678974	0.0157827822513054	0.155721227388465	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88175993027593	2.99094309178896
Merged-chr1-191955428-6	16.7788542204068	-1.34015034674952	0.43913240395001	-3.05181383722728	0.0022746312516725	0.0357833677190376	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37099840468623	2.92154036844959
Merged-chr8-80916064-4	13.9034840100043	-3.17625450510463	0.714237591353775	-4.44705591466323	8.70551836122114e-06	0.000453644978335212	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98995800795981	0.887107926668329
Merged-chr8-33673879-7	39.2833131110358	-0.392906770547054	0.392813162181204	-1.00023830251851	0.317195197137854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6575841991366	3.1665479039597
Merged-chr11-53737201-4	17.7557336576605	0	1.29607269783566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26133043-4	8.3749110928836	0	1.3025163990959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83859932-5	45.316548740512	-0.286224625886444	0.478102601287808	-0.598667786193747	0.54939444300798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75880021742791	2.93171244472175
Merged-chr7-96879003-3	6.88720726832684	0	1.31066347042983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39623355-3	5.76683490114793	0	1.32297861900897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19266245-7	87.2595575216107	0.151152516613471	0.352536605571791	0.428756941051019	0.668100117556351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61159556030117	4.61798371509454
Merged-chr9-118659976-7	26.0623268751279	-0.561225345075616	0.347938038824225	-1.61300370310802	0.106743703266386	0.652260523063893	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66341530614294	4.12097626098931
Merged-chr11-110130982-4	16.8294988840801	-3.47355735743037	0.758447348116777	-4.57982662350287	4.65361528489531e-06	0.000273466856480908	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36807494553628	1.03956264035389
Merged-chr3-54668927-4	13.3724052722048	0.188327837861495	0.918942895381488	0.204939652733605	0.837619274269481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.99794938816682	1.10459859746439
Merged-chr16-13866853-4	8.60201821601578	0	1.31134232349558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64624495-3	18.9212576423813	-4.33267252408727	1.04485473788362	-4.146674525172	3.37339064427003e-05	0.00133275444401735	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86567079458363	0.306240821987646
Merged-chr19-44280933-3	6.65785019035948	-1.75451815566547	0.771701609642233	-2.27357068294685	0.0229918118200539	0.208989141075705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2654282468645	1.99596521771025
Merged-chr12-16216461-5	19.1849551896475	-0.948315431041473	0.317899645387371	-2.98306539438231	0.00285377012674724	0.0427810192022081	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64151908252915	4.702287050517
Merged-chr1-165643882-3	4.9555868659617	0	1.31640616975608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102499132-6	22.2831245696856	-2.56623123628588	0.556719242557711	-4.60956087038765	4.03520378629038e-06	0.000245059876039899	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69031556150959	1.486851288245
Merged-chr3-79172575-4	8.7582930447806	0	1.29200089287423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97355710-4	15.600167333835	-0.573715738502102	0.48701381970598	-1.17802763553705	0.238785589082335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44052752663451	2.91736041455309
Merged-chr5-43082437-2	6.11066270719288	1.95602175677569	1.28249788861883	1.52516567405986	0.127217779908371	0.739211545962332	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr18-62235588-2	7.04651635558182	-2.6632777334272	0.63449750124914	-4.1974597664829	2.69925591735562e-05	0.00111848812413139	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67745048929503	1.486851288245
Merged-chr9-84545529-5	21.6444045934944	1.9835739598828	0.568951889628053	3.48636500913906	0.000489632427451445	0.0108166060190136	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49991039385966	2.74752752051698
Merged-chr15-88128569-9	117.034610924761	0.105753617709464	0.134311620795013	0.787375039356171	0.431062354023847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.91476803307353	8.00915537597892
Merged-chr17-43052644-3	8.97694472839182	0	1.3114620826139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119996131-6	22.8519877213515	-2.63495517173848	0.516962782583002	-5.09699200892749	3.45092889871628e-07	3.46396927519991e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04602904553303	2.173597744938
Merged-chr18-54668717-5	60.1244901566922	-0.559860946124038	0.179533815997702	-3.11841500729425	0.00181826576005841	0.0301487932902251	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.4168243412611	6.86967582850062
Merged-chr7-80033484-5	21.8109919595057	1.02523057441035	0.487501103356598	2.10303231592978	0.035462944710816	0.290105356168375	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93203112524668	3.81612143306626
Merged-chr8-126542241-3	11.4304396684027	-1.84600827032963	0.584493866425326	-3.15830221045694	0.00158690953802827	0.0271035521881849	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42393311136735	2.25104685314663
Merged-chr3-144607263-1	4.48452671184361	0	1.33701490263034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99655677-4	10.1719825813969	0	1.29471402328975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31417144-4	13.975125919662	0	1.29291177573261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16405746-3	8.27354356006404	0	1.30936915187006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51866603-8	50.3958734169312	1.12817236685829	0.283904846324727	3.97376931553996	7.07440833700475e-05	0.00241654096806018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99622295237619	5.14091319018154
Merged-chr19-16222687-3	6.95536303340744	0	1.31822845337733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109147282-4	8.40064077993964	0	1.29280330744953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-5431830-4	12.0639338737609	0	1.28539466408539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12442714-10	76.2510520185012	0.571888476358885	0.202270693579285	2.82734224241299	0.0046936135432465	0.0620365838586136	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61587962238831	6.13158794522814
Merged-chr3-36841020-5	12.8715411129986	0	1.28749704994876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51408562-3	5.86691368864662	0	1.30400868841921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37742433-3	8.13814461698323	0.772344075581585	0.65958633970918	1.17095220001391	0.241617991195877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62350248946141	2.79747371962553
Merged-chr12-77288822-6	14.2642564811164	0	1.30936102643769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46281121-8	38.415673473361	-0.832227615211332	0.322216077678797	-2.58282461013924	0.00979951265768917	0.109276272035726	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29002258789207	4.32308000333877
Merged-chr14-69141089-4	10.4039472250208	0	1.30760227306074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31184641-4	13.3545266778354	0	1.28706026137565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43069051-4	13.57248041905	-1.09361919429921	0.380982139059669	-2.87052615379414	0.00409789295658182	0.0559508803052226	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93701001550966	3.74623763284035
Merged-chr5-103706198-4	25.712089651429	0	1.30009277316552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44066569-2	4.63724729265589	0	1.32687799582077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106392006-3	4.36711913990952	0	1.4068798761283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30665422-2	3.15528935224106	0	1.34809527810174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47522659-1	1.68537702503527	0	1.44971407496787	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116263560-1	1.12551025779989	0	1.78816326610976	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121306057-2	3.01769319473784	2.50921530543938	1.29717787110393	1.9343648711059	0.0530682824057014	0.386988057368928	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr1-165703213-3	13.1250580945856	0	1.36810435487894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124380380-2	6.56942416442391	0	1.30673239366398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37970257-5	16.6973315823613	0	1.2847973649443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37771154-2	3.88302683206368	0	1.41928439838607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113596151-3	12.9520635212217	0	1.31256904657506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22813592-2	3.40545327968034	0	1.38643342701206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20690684-2	5.34711777442961	0	1.34299907285305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83728672-1	3.17029184217692	0	1.35892972928411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126688186-4	7.91497550752334	0	1.28949147664746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8917295-4	9.54270620374903	0	1.29597921268892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116071649-4	7.62530024990851	0	1.30059193613331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66355695-4	8.83953100347315	0	1.34577194825098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69537477-3	7.07621822822603	0.977289406102025	0.731505550519394	1.33599725307363	0.181550171152116	0.950302586038624	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79952710155349	3.07906840187467
Merged-chr8-82356605-3	10.3589231403806	-1.69286709898223	0.662985509633682	-2.55339984718156	0.0106676953323677	0.116575291265506	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94952225397676	1.69735600200997
Merged-chr17-87387239-4	8.30134837765046	0.88858210365735	1.22425507096751	0.725814517521353	0.467952485902851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	0.609949614787909
Merged-chr11-4297087-3	8.15771744763092	0	1.33107579201223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69559290-3	14.7721606090884	0.851072311612832	0.419101464881649	2.03070707913934	0.0422847178078309	0.328754361501088	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71517238759898	5.53255941217164
Merged-chr7-80203705-4	11.4683562598753	0	1.29900495153174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84801865-4	9.53878152635125	0	1.31222265531592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24212431-4	8.16290039773984	-1.11970178028269	0.976071912900765	-1.14715090710384	0.251319257305278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19314570228027	0.683637474991079
Merged-chr11-90492802-4	6.6389038993633	0	1.32196130398612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75178776-8	24.7932021900514	0	1.28340155039764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10848358-4	13.2763519900928	0	1.2947022933758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117219028-3	8.7267765381581	0	1.29034436840825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107466151-4	9.21839563943471	0	1.29156789571682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67189073-1	5.68017084446102	-2.01238900858277	1.04355635788914	-1.92839513972522	0.0538059959141696	0.390971489937432	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97982535492834	1.63657599924846
Merged-chr5-67643786-4	11.1814211068215	-4.83669146657738	1.06583378933541	-4.53794157679433	5.68059920617782e-06	0.000320626150561494	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69673094641756	0
Merged-chr11-34827112-4	7.19873952045247	0	1.29872694808271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28880961-6	14.0268274302632	0	1.28383428028271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111189275-3	9.02023446283606	0	1.3080396879326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76396147-8	27.0029429592562	0.349708294310327	0.351575954506547	0.994687747633817	0.319888155358456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6692315393246	5.04662701284231
Merged-chr17-55721473-4	18.595520054213	0	1.29259580057964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11592127-4	11.1151214217595	-4.39506672813017	1.03083744872483	-4.26358853528942	2.01169738760423e-05	0.000883709151981863	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54597697090407	0.61242769162773
Merged-chr7-45097761-6	26.0943572421846	1.63577426007424	0.349982221476453	4.67387815636316	2.95564721330714e-06	0.00019103830148444	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92058969808339	5.53327409533881
Merged-chr7-128068059-4	8.09276682384588	0	1.29524407148581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85418864-1	5.9685908516895	-1.2370321180372	0.82755867866346	-1.4947968644774	0.134967464906966	0.769597204346475	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55811862099969	1.50243936158991
Merged-chr17-31074102-8	45.7512850412303	-1.08460957084608	0.284800240754712	-3.80831690300506	0.000139915889979386	0.00412773984044829	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.42421999822232	5.35647971613831
Merged-chr6-129171827-4	10.5364375452949	0	1.31644888401631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46834328-3	12.8721668132562	1.6478737095611	0.494704004983103	3.33102965199844	0.000865253851360951	0.0169843430973363	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31460135241848	4.21351898572237
Merged-chr6-120480533-1	4.0168081051712	0	1.35894337265548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136327286-3	14.2629882382137	0	1.29561205946025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86364037-2	6.98001600734547	0	1.30454514724966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140492071-4	9.80599281470021	0	1.2999174633812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5635182-3	7.58210176363875	0	1.29959512512948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95840047-4	7.54027457688244	0	1.29515659245746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16621023-3	8.25623615681591	0	1.30913094897724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34272670-1	5.36072447646423	0.857415672006336	0.742670969774923	1.15450274334297	0.248294114503482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09294460991479	2.46812004905329
Merged-chr18-58160686-7	30.3674967155874	-0.0394755381558821	0.260399661341573	-0.151595965803124	0.879505615454739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51516671266627	5.52090194096473
Merged-chr1-71938729-4	14.487181674139	0	1.29566403289433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146686937-8	49.3232852438679	-2.40676373916115	0.306343203823153	-7.85642935480475	3.95238616811795e-15	5.86983242140536e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.29957982379528	3.83020717129843
Merged-chr2-31447711-4	8.41198765810628	0	1.30459650640261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114526453-4	7.16844743484429	0	1.3057751866811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33917677-3	9.39442828919622	0	1.33841098654307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47589989-6	25.4849725816421	-1.83703600760337	0.389140503764772	-4.72075250412335	2.3497371025166e-06	0.000158458122498503	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18845481778618	3.40594141276558
Merged-chr9-114592494-4	9.671581046771	0	1.29484488228546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21268348-6	24.1627020678834	-1.57751336544013	0.521362234642692	-3.02575303813722	0.00248014784304673	0.0383272173500881	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82240454976976	3.23310585692455
Merged-chr4-88395915-6	14.080968135995	0.0610354970751942	0.533459675918411	0.114414453107659	0.908909257309116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43285052352076	3.27543767220166
Merged-chr3-133585050-4	11.8174492312664	0	1.31198396060964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126613748-8	28.2807699051561	0.0982705367293704	0.375426527359098	0.261757040507087	0.793508761217674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65781285174229	4.98774208624789
Merged-chr5-21611204-3	7.91148660290214	0	1.35270714579791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55732191-2	2.74354001644601	0	1.45545131180652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193875433-2	3.16000509214023	0	1.34326995463427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12252344-2	8.61934566453366	0	1.29984786177353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135312910-2	4.1729296423406	0	1.33072616493399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96001216-4	9.19095710049109	0	1.29177088202267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40678577-2	2.86248684104482	0	1.42835504591359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93214954-2	5.29159194935255	0	1.38556795675532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34557171-7	18.5717192833993	0.714552779745343	0.444503737299248	1.6075292956745	0.107938308252868	0.657286058251041	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44523146324989	4.16713058248203
Merged-chr18-34889074-4	8.29726202302302	0	1.29368687869026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180745446-4	9.66304533523244	0	1.29328474936185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136813311-6	23.9430286615148	0.173383290346058	0.341546787318368	0.507641403121853	0.611704849142673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47272485209582	5.52967910257215
Merged-chr13-56187359-1	7.70188932231381	-3.12943398809387	0.721802537715687	-4.33558185871401	1.45375060824179e-05	0.000683784083113056	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54302723960491	1.23021119707292
Merged-chr7-89216354-4	9.88952818929681	0	1.28722868201446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96766751-3	8.1586540576013	-1.16321240084654	0.660107581693179	-1.7621557956703	0.0780429783858152	0.516069263873657	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59341558946521	1.69733277475078
Merged-chr10-80940839-4	7.40237235402749	0	1.294156963753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35918836-4	6.68553616490752	0	1.30472971316701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88823977-4	8.67774498605469	0	1.29780756613724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147063607-6	45.8826860133839	0.614147034662204	0.222941379970759	2.75474671746786	0.00587375865109994	0.0736146207930143	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9501889126292	6.56781938115391
Merged-chr19-9952498-5	30.0576291878184	0.664404572688932	0.488722848371119	1.35947106811836	0.173997364375264	0.922143696063745	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93082669706004	3.27620127671797
Merged-chr6-86599433-4	9.5790036330701	0	1.29260243180349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59455175-4	10.7798780746127	0	1.2866376406441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94122255-4	11.61821573561	1.0858337169293	0.60466674512024	1.79575563844408	0.0725333888281717	0.488686135309383	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81271942502408	2.63228770631367
Merged-chr4-150605977-8	24.6321675178552	-0.0344973860734341	0.32961471883208	-0.104659725741825	0.916645820592118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46287434926356	4.40748126875499
Merged-chr2-115765091-7	33.6877186325748	-0.850985538481279	0.331986071306404	-2.56331699439242	0.0103677341585693	0.114055548203008	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78367255195668	3.81435011711971
Merged-chr9-95682024-2	5.00335956700669	0	1.30852639679595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134074869-3	10.3466928193364	0	1.32787640487361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98091794-4	12.4462908389506	0	1.28034681863692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116397617-2	5.09265109539055	0	1.32569046865013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98813478-1	3.07606103869946	0	1.38360432464784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75051957-3	17.8190515556572	0	1.2994714025844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50825572-3	13.171153263209	1.46754049999007	0.519693179461689	2.82385945782508	0.00474491861012065	0.0625333217472927	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83342538833854	5.48713643265438
Merged-chr13-67724224-12	54.8350341021192	-0.416315963211448	0.217107878890011	-1.91755345471528	0.0551676568267385	0.398384982097475	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0944843241305	5.68320646851694
Merged-chr10-75484882-1	3.0709316196272	0	1.36181293958255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131239719-5	15.1895263174388	0	1.29061876500019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52677333-8	40.1378875112787	1.21302946519436	0.24364543891754	4.97866683071747	6.40237432784053e-07	5.66896413044806e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99679498156567	6.27840356596334
Merged-chr13-44532938-4	15.4770615162352	0	1.28858593216045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81045546-4	8.88450045482216	0	1.3092144684467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119933445-3	9.37907844062533	1.10678896141459	0.569425523551054	1.94369397864786	0.0519323651768214	0.381128968423694	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8793357412364	2.47679065818919
Merged-chr4-108347229-8	36.2076859926514	0.646012100083013	0.299637249030718	2.15598061380141	0.0310851789556518	0.263632979109153	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55544350654221	5.17422035076606
Merged-chr14-60273524-2	5.06020546507892	0	1.3094411595146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70476566-8	39.031282994405	-0.0267537847025297	0.313038957609623	-0.0854647131041536	0.93189194766271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38227364951372	5.24900388674161
Merged-chr3-136708448-4	7.16715403048667	0	1.29316022053856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4093028-4	14.8710075096601	0	1.29901639438445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81658050-4	10.8894916795957	0	1.29442511251889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25135686-2	3.83267876685415	0	1.35936070810335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-78919668-4	8.01743704905962	0	1.29183343831913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131698976-8	29.1605775896359	0.305149448298091	0.324833283404885	0.939403268961636	0.347523735285548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34971192460905	4.53999638423925
Merged-chr4-16083265-3	5.19194484119167	0	1.32673024221783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65345534-7	50.748175514129	1.02526132209451	0.476927366941106	2.14972214463239	0.0315771997307177	0.26631952679446	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16308661561553	3.18658330263614
Merged-chr10-93090430-2	5.30172919058741	3.4461027271088	1.07504349304113	3.20554726335797	0.00134805905959585	0.0238727011675747	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr6-33859767-4	6.65475608310726	0	1.29768859457611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32590343-4	11.3562382727649	0	1.2901995195633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88738819-5	16.8998714476681	0.574748921561654	0.428712567358951	1.34063931249403	0.180037586991124	0.944427724132777	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48318312449652	3.91584784051865
Merged-chr3-127321889-1	7.3974419035472	0.595242665105261	0.854865021400872	0.696300176289624	0.486240862806106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79616544004929	2.91274678318511
Merged-chr4-58304742-3	10.5869126976813	-3.17766454291431	0.593694437499912	-5.35235694020593	8.68159336718062e-08	1.10156776732385e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08067556640879	1.84263888870065
Merged-chr3-8691602-2	4.12536702354613	0	1.38199714360378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145029263-6	13.4524589202089	-0.726649881044684	0.480995756963432	-1.51071993988489	0.130859819901234	0.753805164956457	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55095279161578	3.4788926558196
Merged-chr2-30708005-2	4.83677182146247	0	1.31306510840147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12934108-3	8.21357864927032	0	1.29614713962864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114281862-3	11.8869639495111	0.236975089674	0.510142353045211	0.464527378014031	0.64226994907603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98036737236826	3.39274708187805
Merged-chr8-11113428-2	5.45619821805033	0	1.31817316615469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75600322-2	4.54240062025141	0	1.31328444227086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-6753578-4	10.0457132876343	1.1254611075086	0.67651096989144	1.66362580593365	0.09618723153428	0.601952750189075	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25253199476414	2.36173837884825
Merged-chr8-117298382-4	9.70038024739182	0	1.28629896231541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99237335-4	10.1049862402256	0	1.30716288110765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35478384-3	10.7304876765478	-0.988834483096565	0.712476101055218	-1.38788442395758	0.165172241574668	0.886881289888108	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33184178463999	1.26501898168246
Merged-chr3-109030867-4	7.35000427266653	0	1.31687291853941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103374115-4	6.45491306160715	0	1.33843204510261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17586992-5	32.7494326046842	-0.414180409174312	0.390999806318615	-1.05928545866544	0.28946979534808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77793401540589	3.3965928268399
Merged-chr2-167715206-4	14.0078013636886	0	1.30541634085788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101144917-8	23.9142108892891	0.369154226118089	0.307704588675559	1.19970335088932	0.230254571191403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59038509808264	4.85488846804154
Merged-chr6-134559782-6	27.6750454954744	-0.825200002810678	0.306410535210002	-2.69311889764207	0.00707870203807067	0.0846878182679908	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12448060510764	5.33704438904629
Merged-chr3-87349918-8	33.2768682417288	-0.593601532656516	0.305650043424631	-1.94209536503105	0.0521255565238248	0.381989078906118	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85675199665128	5.18240088854218
Merged-chr3-27193619-1	3.76458003073753	0	1.32353453934915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3961602-3	12.3775093567123	0	1.30437926442199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115312431-2	5.29121857837875	0	1.31104048242596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100067298-1	2.98249548983524	0	1.31941154250968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56299923-1	3.69821753941454	0	1.31578836364907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125219165-3	8.18529523594559	0	1.28836281088825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17609751-5	30.0554375045601	-3.84950735910203	0.546668136849194	-7.04176281663178	1.89822756736462e-12	1.14853313534267e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22322244928264	1.69442907999601
Merged-chr1-173489725-2	8.18860646291147	0.0983950900597641	1.30530030221425	0.0753811899781617	0.939911424846345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr18-49609438-3	8.21738464267382	0	1.35320758105402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77921117-3	6.71308697270839	0	1.3290433487458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162573910-4	12.0243398960279	-0.857771815669416	0.640764750474273	-1.33866885629168	0.180678499279995	0.947105504087163	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99417091068862	2.15118048328457
Merged-chr4-129782979-5	25.5290661206586	1.11962646890314	0.426353151206051	2.6260541659795	0.00863810701542432	0.0989422858948147	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40024916778634	4.48730442305013
Merged-chr6-116089668-1	1.97810398920821	0	1.4416652707346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103282488-2	6.18621518930566	-0.266354650760705	0.721359556183944	-0.369239789613026	0.711949000217975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38806753531572	2.08153858449613
Merged-chr16-11016568-1	1.86917309804353	0	1.43208949078894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81675759-1	3.29439812596686	0	1.36135301004446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33669156-2	2.54871439505213	0	1.41574687434601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86671408-1	1.91876488103563	0	1.47969381145817	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125540567-1	5.43268431279892	-0.051182398196308	1.07729516961561	-0.0475100971765895	0.962106683041321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25461080376897	1.58756080918295
Merged-chr3-37705069-4	7.10609377540899	0	1.30855391038774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76129011-1	2.64068089563809	3.36069039263524	1.32822521977779	2.53021124926198	0.0113993870194975	0.122537332063221	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.39589217010968
Merged-chr5-43801961-7	37.3739296489778	-1.50440141634266	0.349262102208417	-4.30737090234008	1.65206458458826e-05	0.000757053382500032	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13227330268969	4.50522800598996
Merged-chr18-61452463-3	6.19373396024108	0	1.31322144853989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112343794-6	20.3341997328751	-2.11020279486903	0.585258161798162	-3.6055931084935	0.000311440798865985	0.00769429506340139	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21349436059902	1.26927213904674
Merged-chr10-111672927-9	21.0874192673651	0	1.28499058136814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40965088-3	13.664365223418	-2.02797819552314	0.500636842538354	-4.05079695142048	5.10434869264663e-05	0.00184996544464607	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52486624335926	2.10987414329683
Merged-chr19-21785248-4	10.0139728599331	0	1.29725625560885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56264232-4	7.18199591630021	0	1.31242579358962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16114917-3	5.28469850582656	0	1.31662069954733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15960954-3	19.0718603830022	-0.468421058365841	0.453387313506489	-1.03315872414488	0.301529625477837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38360358813206	5.07991891372579
Merged-chr12-117586298-4	7.50718791777345	0	1.29568434671025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62186229-1	6.90858704659669	-0.400868464220822	0.710299243057422	-0.564365608071492	0.572505339586005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21549439529278	1.35700371934843
Merged-chr6-87537076-2	4.54309982317209	0	1.32616627692319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57849295-6	47.6190420868777	-1.63938798888266	0.357363714362719	-4.58744948911826	4.48693940292141e-06	0.000266064920347824	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.78937483149111	5.08257823397251
Merged-chr3-47885690-5	17.0693654812169	1.18510779246609	0.593742863754681	1.99599500863348	0.0459344661019907	0.348338589056595	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03830315530056	5.00378373882687
Merged-chr8-31123487-7	32.7190221022768	0.162630764269907	0.359132235050909	0.452843683739092	0.650661305392561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02485629809076	5.04835575673681
Merged-chr3-126831614-7	43.6582374226829	-2.31096445735359	0.473953612364926	-4.87592962066978	1.0829721826035e-06	8.54684785560489e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13499490480205	3.54650444114996
Merged-chr2-128710131-3	9.41514603749537	-0.55107777987438	0.636493155408969	-0.865803151520606	0.386598120642074	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31494977774649	3.20651442883605
Merged-chr2-118567365-5	19.9328873544886	2.97876450552889	0.58786745862277	5.06706820021542	4.03989570426169e-07	3.96611351857081e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53157202476515	4.05533023557349
Merged-chr6-94222443-2	3.8072858609447	0	1.33183236759785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118766156-5	29.7941283914035	1.20164226837561	0.600316154217668	2.00168238008119	0.045318902618443	0.345233039228815	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18461384930244	2.43067782037622
Merged-chr2-49349898-4	15.7620920406586	0	1.31773346215824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61674291-4	7.74875599663453	-3.51796875800963	0.994985599063132	-3.53569816620674	0.000406699084157401	0.0094108209466535	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65622901491057	0.469435083901436
Merged-chr3-135670780-3	8.95519573452259	0	1.29694689818002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38114656-3	15.0104452854901	0	1.30659813034163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38095474-4	15.3722591776277	0.164229881904824	0.639087771170565	0.256975472405016	0.797197707580825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83868179393827	2.70275322934241
Merged-chr1-13328525-2	4.25677511065969	0	1.31435679720429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77816204-4	7.27477290044152	0	1.29321768143373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64193364-4	6.44633309168887	0	1.31784169565608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4921519-4	9.02373867653317	0	1.29902431136446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27025514-9	48.28792218041	1.17592215511421	0.265636478248967	4.4268097622198	9.56370070381e-06	0.000487860723021989	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68912889241712	5.79223795660011
Merged-chr2-114139249-4	15.9595331455919	0.0610056300058729	0.374771125077579	0.162781030671038	0.870690844376802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62192327416571	4.64070353491171
Merged-chr11-49237813-3	9.15591708474917	0	1.29473101903243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154093558-4	11.207149281393	0	1.29444865086908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60859770-3	9.85921322584599	0	1.59743668533116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17874279-2	7.36601609161225	-3.3397325387347	0.874178104361007	-3.82042574856748	0.000133221508290984	0.00398056364004693	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36697032654948	1.03956264035389
Merged-chr12-76887008-4	7.80610677348289	0	1.3007244507713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31442662-2	7.70646985031269	0	1.35380936657888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172427040-7	30.2580028091447	-0.346946199631425	0.299633166490464	-1.1579031910757	0.246903545152942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47614452722917	5.12183171249329
Merged-chr13-56613710-8	35.7368573600155	-0.812133233746117	0.295479269781547	-2.74852863399365	0.00598634058974615	0.0746390788356328	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48009199211277	4.67468301082581
Merged-chr9-96393900-3	10.5285278750771	0	1.2865132600074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55636916-5	13.3533519369236	0	1.28458434418147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111550433-6	14.0633689979651	-2.61959143564255	0.682432816776128	-3.83860707053587	0.000123734256623066	0.0037545591038645	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95525138737821	1.20275690226768
Merged-chr1-184616116-4	11.887394991556	0	1.28904091271892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37844081-8	24.720541732331	0.0357486321005527	0.315581060322704	0.113278762876318	0.909809553623779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37922073703132	4.37343274121978
Merged-chr14-75147901-4	12.8310894785802	0	1.30716146815769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88112028-4	11.062166631494	0	1.32142964543285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44281147-4	8.50412346133979	0	1.29368176271341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181257054-4	16.9536262223905	0	1.28369623339365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66075343-9	54.448848611603	0.0342948742920271	0.335777068583204	0.102135843989385	0.918648850379846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24303650147488	4.10823302057479
Merged-chr5-64900420-4	6.90361871518711	0	1.30329330986066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28671337-4	13.6817256011102	0.55808500529916	0.515969163441729	1.08162472651757	0.279419312803247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03438809465392	3.54091155405927
Merged-chr10-68465074-4	8.24993287056044	0	1.29660115397885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139068363-2	3.97120847301439	0	1.37296773922204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31576853-2	3.91259628663435	0	1.47364457702891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34557122-2	2.08569381753078	0	2.43119134037491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43499659-3	7.79275873884772	0	1.29835351875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99393138-4	9.68572773676162	0	1.3093856329444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144198913-2	4.62359760548735	0	1.33869999316114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123207577-2	3.7058215158369	0	1.32421086029762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100428515-4	11.8835544638848	0	1.28846751033508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89179585-2	4.01210038006502	0	1.37263688348139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48788865-4	12.7267365425347	0	1.29819821513697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21139405-4	9.55564938008317	0	1.2889120131817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40773337-4	8.5062481561631	0	1.29301734111982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86096870-2	4.2553611783298	-4.5690297649862	1.25011641223465	-3.65488343347065	0.000257298855463612	0.00663242876504572	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02589880641831	0
Merged-chr9-118679021-7	20.4539249382367	-0.745951334671306	0.381369522670055	-1.95598046075819	0.0504674558882007	0.373186191294598	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20707141756068	3.70612360197456
Merged-chr13-81208210-2	5.10232360971054	0	1.35713742163287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94159430-4	20.5975534326901	0	1.28393896605484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54523914-4	8.62412471248731	0	1.29312122331887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45340842-4	8.20020749756667	0	1.29202636922491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100839123-2	8.03921860411234	-2.92500330490715	0.968787022414127	-3.01924286477157	0.00253407301851757	0.0389169296047119	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54831476661438	0.733321818366247
Merged-chr2-52287607-3	7.13059441352818	0	1.29977613360378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125413536-2	11.0233573013605	-1.11996929979234	0.617262865052783	-1.81441224347194	0.0696142821944482	0.473411893462214	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64942332282865	2.88460372006992
Merged-chr12-85477453-2	8.36393115910082	0	1.37716339355123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34235612-3	8.52309684326969	0	1.31396731295061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31210026-4	9.3051402921594	0	1.29615067628512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116629167-4	10.1624978897593	0	1.31203871579026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99270180-6	44.5136076718963	-1.34784059643092	0.358721627327633	-3.75734411797784	0.000171726273310886	0.0048488793245751	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74257160813568	4.38576809416749
Merged-chr9-58401914-4	7.51883919620527	0	1.29108968185138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117993989-4	18.0969673249186	-2.93212712181968	0.624641141735575	-4.69409862064597	2.67784831409865e-06	0.000176754218114233	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6205480545069	1.98740100716091
Merged-chr10-95357221-2	4.6117038170179	0	1.35061453871327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50981211-2	4.58682373551905	0	1.32059851327291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106318983-4	16.912562707507	0	1.28819974730762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82140151-3	5.82415225644417	0	1.39312620732229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41639854-4	9.84229578022163	0	1.31122325907664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129861547-4	15.0314911702187	-1.03311844828791	1.03228530810362	-1.00080708325281	0.316920084439746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43869747990317	0.61242769162773
Merged-chr17-8856621-6	24.9817194573539	-0.94117271583515	0.478778329477507	-1.96577968944889	0.0493240649282875	0.36705732226442	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70960276226557	2.50319514478136
Merged-chr3-133314711-4	9.19173284972429	0	1.2958474036901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41445848-6	19.6381485351809	-0.236121234203102	0.376599052384457	-0.626983081099351	0.530670325568824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39602161602623	3.98534642836596
Merged-chr17-43534960-3	11.8140810913049	0	1.28715615679329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75104594-4	11.7876217705304	-1.41486828091112	0.76123737132353	-1.85864269702254	0.0630778008006617	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72838248823182	0.845523456341755
Merged-chr14-120407021-4	7.83817947918465	0	1.2919033482569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5846194-4	12.1035323676533	0	1.30285525875743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58536251-4	17.4159201521266	0.648277749114236	0.933970650935896	0.694109336802631	0.487613643676655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716345901999145	1.08186277552917
Merged-chr16-44793901-2	4.02905265870719	0	1.33208588628804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128076391-8	33.1588588981447	-0.599241080953419	0.302729441179371	-1.97946086320148	0.0477641418248269	0.358923138418254	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13111243210219	4.60610925242826
Merged-chr11-89003373-3	14.9118375125004	0	1.28160570648574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134279159-1	5.25006501910528	-0.331613730739706	1.13201145050334	-0.292942028627235	0.769566463091109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26539889078211	0.581381506691384
Merged-chr16-92423612-4	10.2659784004645	0	1.28807475416861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74908500-2	5.24189439282607	0	1.30058979195079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9826046-4	6.74919954698755	0	1.31117050293157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86603893-4	10.947886884238	0	1.29273411117727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91082191-7	18.6615023526777	0	1.28074994270681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95591291-4	8.59573466055858	0	1.30109016074769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120049592-8	41.09924803101	-1.89399388220145	0.323422936220039	-5.85609018437976	4.73890949637436e-09	9.49904232975702e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19518317446728	3.87830690473738
Merged-chr2-157688587-10	48.4198613901192	-1.45647743761355	0.310881959592262	-4.68498538649139	2.79979907979114e-06	0.000183322315298629	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94168504883651	4.44028262435412
Merged-chr18-53899354-5	21.7336665429567	2.57302334375	0.437181434985957	5.8854817195809	3.96896256076766e-09	8.20746289544062e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58600496928306	4.40711512261102
Merged-chr16-85152571-11	72.6879753773022	0.166436920027266	0.225948647070746	0.736613926150899	0.461357163683406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96587855171987	6.12368807238251
Merged-chr13-60722893-2	8.86363693752057	2.48506256070057	1.21485933293708	2.04555580496107	0.0408000934348498	0.320948947344853	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr4-16071459-4	13.2631533386433	0	1.30452271209266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41364173-8	38.5305332483546	1.96129273554791	0.273982126374351	7.15846964727958	8.15826462728857e-13	5.79467348189999e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78665873498853	5.80718739579382
Merged-chr5-90339820-7	29.6860259041091	-0.60929711989528	0.305185683447569	-1.99648002164544	0.0458816982422921	0.348019205263009	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98153658030805	4.35142890542652
Merged-chr13-110545505-7	33.395150345052	-0.669904173365847	0.433672617253854	-1.54472324678437	0.122413219396368	0.719717886036921	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81827866088369	4.25602575077936
Merged-chr6-55016313-4	8.981050389211	0	1.29036675971564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75222090-4	8.05350904759006	0	1.28693300971197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83082963-4	8.80173880870124	0	1.30563868131939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85124783-8	46.5476469034283	0.938593323560431	0.345082809621946	2.7199075044877	0.00653001793636281	0.0799532606463489	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88344809161952	4.69375487577502
Merged-chr2-102163303-1	4.45292626311777	1.96297995931114	1.3225138808344	1.48427928640919	0.137734843136962	0.780541241837477	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr7-145308458-4	14.0269388344985	0	1.2881785133055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49633973-1	4.03591290188953	0	1.39198029753988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19019276-2	4.05506016154614	0	1.33590156330591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139017576-3	6.85952763161382	0	1.29255126853933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42244734-4	7.2925659947959	0	1.30744754722213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36899833-1	2.15710073881409	0	1.60792676418628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121452225-2	8.57175281083568	1.51934095408775	0.769185180628968	1.97526030447619	0.0482386155167536	0.361573820779741	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27578432768462	2.22281280114811
Merged-chr1-93575436-1	1.83481788388142	0	1.51774997860977	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106794229-4	8.17686137624658	0	1.30750250854917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9087449-2	9.50537153795489	0	1.29817986174604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-123932313-3	7.31480234683655	0	1.31821006262912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90198104-4	7.60641435657844	0	1.29724416894246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122602478-4	15.5471493370269	1.47259543783489	0.84824756565032	1.7360444019735	0.0825559838367583	0.537171256067879	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15739180407335	1.80725200154661
Merged-chr15-81511948-1	4.87797404537662	0	1.30432114154419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81542045-1	2.92408067812615	0	1.34102725727943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141526151-1	1.78696388986572	0	1.63641150914942	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39412291-4	9.68060191255874	0	1.29704362826177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31315852-4	6.96047842585684	0	1.30808761860991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28547999-4	6.83294251220954	0	1.29965836944202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135773957-4	16.3931861527368	0	1.30557349957494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149831293-4	10.2750305199319	0	1.29859631353065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12949307-4	11.4766387347362	0	1.29665826523873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64234582-4	14.8752453074723	0	1.28681320362755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4777332-4	7.46435687068184	0	1.28902630244453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109108595-4	11.0927266620603	1.9901852310506	0.728890897985858	2.7304295286854	0.00632518546072822	0.0780743424852184	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994475741705525	2.23285743666231
Merged-chr6-120179855-8	36.3286843635231	-0.239272231922225	0.286291196724019	-0.835765244129669	0.40328698267219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53787280115707	4.49278607930647
Merged-chr9-116077657-3	8.69203303982016	0	1.28882016312101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26696261-3	19.2896840535634	-0.799277725807826	0.457568955998314	-1.74679185580669	0.0806734498144129	0.528278109186555	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67042711260992	3.2180769473006
Merged-chr2-129570460-6	23.9168600987341	-1.48440115479653	0.530142608930563	-2.80000348923274	0.00511020542342008	0.0663088728353471	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0354334481515	2.27624770054806
Merged-chr17-27074443-4	8.2534440882153	3.16635824962721	1.10329863080756	2.86990136778253	0.00410599855072655	0.0560498394183784	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29684500016202
Merged-chr2-103488980-8	26.4820938929414	-0.477036877112	0.346694905285293	-1.37595583274998	0.168835307792392	0.901586338400069	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17063089175471	4.60166672997688
Merged-chr4-133928898-8	30.3130923637854	1.21936434434694	0.278310221173019	4.38131355437674	1.17965963727322e-05	0.000578289862395019	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58322313193149	5.77923020852127
Merged-chr3-68794552-2	4.27408297553461	0	1.34271407055217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9907686-2	4.7482097584118	0	1.3099122506219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-42908886-4	19.1512852288434	0	1.30979511580195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64237826-4	12.3903983120768	1.93207841265434	0.704105906757557	2.74401676525007	0.00606924382009648	0.0754711335238867	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06470521466083	3.32757362771984
Merged-chr9-106356720-8	35.362157980123	-0.766030062839332	0.31262594932402	-2.45030863399437	0.0142733811352581	0.144493937051057	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51560588486504	4.63236547145187
Merged-chr18-79578026-1	4.34841091257075	0.198870313643347	1.10755005933746	0.179558758510935	0.857498984295794	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.878893210046761	0.581381506691384
Merged-chr12-3297807-4	16.6646243425647	0	1.29668498031049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36739925-5	25.6406566430324	1.01648625974647	0.468816731293089	2.16819535630224	0.0301438259893228	0.257622083847539	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8524341640908	3.49773980994036
Merged-chr2-119336174-4	10.655956941325	3.36326869266239	1.06547532228562	3.15658994846321	0.00159625646337622	0.0271992111749106	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.57612722179308
Merged-chr16-57347868-4	10.6199045673579	0	1.30271449466507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21549923-7	27.577843349178	-1.16523606325737	0.312917192450965	-3.72378409166499	0.000196258785177974	0.00539080562263131	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30474276597494	4.16240360665462
Merged-chr16-15986306-3	7.74440897326424	0	1.30265151267946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43260085-8	32.4870671130007	-0.175468434088834	0.235177470637497	-0.746110729115296	0.45560052860425	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89338614957529	5.70105989855309
Merged-chr8-35466836-8	65.2066268988089	0.838658700884283	0.207548832510514	4.0407777328345	5.32742321371719e-05	0.00191245941003226	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30408631684852	7.1572461846072
Merged-chr4-45473344-6	18.8149306446079	-0.0884630665039982	0.490716686398575	-0.180273198275034	0.856938095626158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81261921561557	3.74246342764304
Merged-chr9-122138864-2	5.86834527305546	0	1.30481317554504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136795011-4	7.71258129388834	0	1.30398896390079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106669511-2	6.62461583501631	2.48006525722207	1.19182531734049	2.08089660551619	0.0374433709302987	0.301067370101058	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr17-71301013-4	9.49314522497365	4.65989552302356	0.954879219521493	4.88008894502775	1.06038006646565e-06	8.41939195908434e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.92690042314084
Merged-chr2-170155121-4	9.00185404330631	0	1.2968117096428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155094042-2	8.20730653231206	-5.94824418189024	1.05432708083829	-5.64174466348793	1.68335616172393e-08	2.77779272080838e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7014595432782	0
Merged-chr4-149820755-3	6.13706424092106	0	1.32148644399983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-6127254-4	9.01971332541484	0	1.29815768181423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115097159-4	13.8570181012048	0	1.3128798124579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160058334-4	7.22664949221326	0	1.30204820141924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3847594-4	12.5280394325414	0	1.30891854321777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9023346-3	9.7547508753626	0	1.28871437634714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149349386-4	21.2693069426966	-3.21173443848081	1.02766719047647	-3.12526707891853	0.0017764369089246	0.0295752984077929	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30331194400695	0
Merged-chr11-32554807-5	16.7358446453142	0	1.28543457012802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51422439-3	5.6166709851357	0	1.29286412206962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29629550-3	9.38651055513533	0	1.34924696812037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111228486-2	4.26670986551649	0	1.34752290911956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130549314-2	4.02393236002866	0	1.3453966231283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122111901-2	3.18122075561759	0	1.52998799146827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21467187-2	5.49126083346632	1.02136733338333	1.18166579003962	0.864345352122856	0.387398203432476	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.73596151290311
Merged-chr17-83527861-4	13.0978162685396	0	1.29136435641106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45086426-4	15.4328244078191	0.775896904842787	0.391569328794836	1.98150582230438	0.0475345770826313	0.35760931084983	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92245853993981	4.75840753085945
Merged-chr19-17359751-8	44.4931061287358	-0.103074671521441	0.220243473534392	-0.468003295931245	0.639782232718609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23980639733607	6.11203613252184
Merged-chr13-47216511-6	25.1923617200234	-1.91839092346377	0.468138512053441	-4.09791306220236	4.16891790859889e-05	0.00158384947474013	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18380489065529	3.3009007084372
Merged-chr14-122060824-5	23.2184748311012	0.974971629095623	0.476666133598011	2.04539731349543	0.0408157035985424	0.320982390801455	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25313511225698	3.67266611792802
Merged-chr4-120993246-9	49.3813417011268	1.08951193292436	0.251986186854166	4.32369705072328	1.53435963121847e-05	0.000712610266251616	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5746451233811	5.69356174740769
Merged-chr8-57574619-4	8.04754648263201	0	1.29572264208898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56335049-7	33.5665509575274	1.47132842956193	0.374390006411051	3.92993510608435	8.49687904131153e-05	0.00277618528916772	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57604176657634	5.1777225876689
Merged-chr10-21918881-6	25.2013771124914	-3.23209134980217	0.498127359273541	-6.48848389800509	8.67044210573185e-11	3.11306983429205e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44790927442506	1.58115091314687
Merged-chr8-82370816-8	30.5377753664877	0.626006235971426	0.280955807060556	2.22813061783948	0.0258718060887356	0.22840030271204	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3992510904756	5.00619897360439
Merged-chr15-95826115-4	7.1791207403367	0	1.3020484707559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145320370-3	9.82931965756077	0.427217200941087	0.464883872501827	0.918976170633685	0.358108036367073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27452492329489	4.6829496306989
Merged-chr18-55624335-3	6.42504533412049	0	1.30825028033387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156729859-6	17.392639992648	0	1.28407071600912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15234761-2	5.79280127459447	0	1.36730941846865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85029877-1	3.25408931236245	0	1.339181335931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140110468-2	5.99525980308216	0	1.33574665915247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100440169-2	6.69023682992017	0	1.30690875838195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72737060-4	10.8941522519815	0	1.30607480505961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31181844-2	9.66450765193926	0	1.34300988551518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18694549-3	6.94453469246947	0	1.29178935954483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173409177-8	35.5446425728131	-0.28517097602264	0.309179651961531	-0.922347166812007	0.356347518649272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00415177581117	4.70694722134564
Merged-chr3-136166882-3	12.3433621459667	-4.04796664333621	0.73410608102619	-5.51414400174651	3.50481553837846e-08	5.14664440833436e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00096160973129	1.08186277552917
Merged-chr2-80025803-6	32.8058283275591	2.60960098281932	0.469763874056932	5.5551333913409	2.7739984093831e-08	4.21595927071026e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99183756558442	4.36718674755452
Merged-chr6-136861212-4	16.2965364917681	0.184678601038658	0.418254911465724	0.441545564621046	0.658818082580807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57555142909666	4.27837676382767
Merged-chr9-61243578-4	12.8826753479213	0	1.35439117105979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-75254452-4	7.020998557037	0	1.28943905456823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98031308-4	14.0901015412838	0	1.28427965733528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65737786-4	15.6798665398928	0	1.28703419168655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42103752-2	5.43302837355936	0	1.33236713669901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67459977-8	35.9393006564437	0.442778941922152	0.336948730817733	1.31408401761177	0.188817931947357	0.977671146859387	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05730979544756	4.41300906629226
Merged-chr2-120652054-2	10.6010883826967	2.63627435483378	0.869361129398413	3.03242722234205	0.00242595588229774	0.0376636999488307	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.904678204351698	2.60000191931229
Merged-chr17-49016376-5	18.1053633968636	-0.761785005219902	0.61361910626734	-1.24146232970785	0.214435005869857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80308531001227	1.47158896970822
Merged-chr4-141857627-7	33.70736742723	0.776762212422681	0.272501781115325	2.85048490047831	0.00436526229780728	0.058621543385227	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89031147454265	5.57905350454905
Merged-chr4-129855298-9	41.632413863558	-0.968875181020148	0.353389400590161	-2.74166451908892	0.00611287398300358	0.0759414188770631	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13435793191295	4.1311461189947
Merged-chr11-119126619-3	6.09328835569444	0	1.29939375851386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38939290-3	7.66174302256717	0	1.29904164559627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106612915-7	28.3645332638483	-1.18174708191851	0.307169044366342	-3.84722062197488	0.000119465383935037	0.00364623305867302	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72011917517218	4.5407617433947
Merged-chr6-17508710-3	8.50374325811474	-2.43489858563295	0.617118751948613	-3.9455916352315	7.96031811891655e-05	0.00264720075215634	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74308577917601	2.45916162824808
Merged-chr11-119431800-2	6.11984581142893	-1.14944965630164	0.881130247965954	-1.30451730485372	0.192057263223931	0.989293230540043	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58978639428308	1.2679693671925
Merged-chr18-67700546-4	9.15525041472881	0.671647684131357	0.64312059005046	1.04435730175994	0.296320110655711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78170872760527	2.73430231295182
Merged-chr8-107269378-4	9.11848597507653	0	1.30688677950681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11037667-3	6.25559842528259	0	1.34429983533948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75656749-1	3.60939242754058	0.32753877030071	1.02734479296266	0.318820684685764	0.749862492063351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76412667259173	1.76659013712664
Merged-chr19-55862733-3	5.34301268639518	0	1.34276297012452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122558906-3	8.31488682798937	-4.0974254410086	1.13815363149085	-3.60006358336832	0.000318139375648607	0.00782134523744691	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58413282747546	0
Merged-chr8-83200387-7	23.3249252467824	0.240259848336742	0.365671157000539	0.657038007338346	0.511156478178815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8154894377483	5.01313657713268
Merged-chr18-60807542-16	110.082640356898	1.4142212154257	0.199672727308598	7.08269594194505	1.41376652223906e-12	8.88307568867629e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57722216619861	7.00808338922576
Merged-chr6-122653264-4	11.0654627048008	0	1.29320751086802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10228213-4	9.57695632545164	0	1.30151634406364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33562521-6	25.0751548245231	-1.00809488253495	0.402301597414181	-2.50581874149777	0.0122168229951951	0.12919898291698	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68665822081034	3.76021172301428
Merged-chr7-137420746-4	5.8248484018505	0	1.32339822879058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30786728-6	19.668315125543	-0.620039367541003	0.393834332322618	-1.57436596216575	0.115402868190976	0.689757232672414	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13913101872245	3.6138908194988
Merged-chr1-152677283-3	6.94878989831788	0	1.30930026150988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34233174-3	5.02920248725196	0	1.31559402900826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142284838-2	4.21701727432644	0	1.32172667147835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-69667966-4	8.02564897108632	0	1.30828855237135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117714375-8	24.8583500884504	0.547685736606492	0.405725950748616	1.34989082062891	0.177051006557405	0.933069282615694	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05162537303196	3.77468028920909
Merged-chr16-36752170-2	5.67624849019173	0	1.30333051950984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83860892-4	12.7372443827042	0	1.28224031690471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143449749-3	6.24968678581142	0	1.30573996487844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61267588-4	7.72067031102142	0	1.31010241920883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45095763-5	17.9072491980517	-0.804186197535908	0.362060044966773	-2.22114041224767	0.0263414526182962	0.231576558966122	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15183743410226	4.20464911707701
Merged-chr5-81058344-6	27.5021559864038	2.67095021796731	0.443510562000306	6.02229224467818	1.71964030134082e-09	4.04214442918767e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72633115916728	4.78866985132061
Merged-chr3-15128549-3	7.55779721719658	0	1.31765442540331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113422658-13	94.0014233056016	0.326651126953484	0.220024358064317	1.48461347564981	0.13764624369625	0.780301161220992	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.3189801833594	7.64800576272345
Merged-chr1-92217429-4	9.57472873302505	0	1.29469561978627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24757989-4	6.63538455728497	0	1.28811179579539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116123029-3	7.66223499032279	0	1.30359593231269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63974821-2	4.87676385900157	0	1.32724997682318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117353341-4	19.082449583791	0	1.29022104533797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48825730-4	11.0112132087739	0	1.28801853217926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56953329-7	28.2660684417197	-0.488006339832394	0.300892245158401	-1.62186413137862	0.104832443101989	0.643651303856299	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44894894201044	4.90928822613204
Merged-chr1-86202812-4	8.88247375302182	0	1.29055217045508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76482315-7	31.4556147497991	0.280413864744503	0.347921672813083	0.805968373505585	0.420261085117096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29286332958408	4.57190870187054
Merged-chr17-67339797-3	8.27751462972497	0	1.29649798492657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153981035-3	6.32470274540111	0	1.29961307391159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106429292-4	13.3865979793035	0	1.2978130016487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134807242-2	6.6356625752929	-1.09340155112871	0.936395025131139	-1.16767125175145	0.242939397221949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82118210676175	0.926147595614233
Merged-chr2-124298984-4	9.81607888251301	0	1.30106505132119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109249039-4	9.24205834629054	0	1.30463488224211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19415165-4	8.01011642386814	0	1.30407423662931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32912130-2	6.76419273373524	2.34264603089961	0.923996830909968	2.53533989785715	0.011233826633123	0.12117623558403	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	2.16022678139939
Merged-chr18-67500780-3	5.68446799479846	0	1.33043924476384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58523062-3	8.708264559165	0	1.29875126375599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108404880-4	12.8713293643961	0	1.292420427339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161361916-5	21.5607207067334	-2.42968113135764	0.595494910578933	-4.08010394076338	4.50155675196088e-05	0.00167898817073993	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11714110085296	1.71427828315313
Merged-chr17-50388965-8	55.3937673632336	-0.817466640275962	0.306991293535546	-2.66283330338588	0.00774857891462107	0.0906604543876148	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79119523513937	5.05442259512325
Merged-chr9-77959941-6	31.226062316171	-0.388960389211205	0.343031680571867	-1.13389057407983	0.256840451467031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30131861896127	3.86754754342659
Merged-chr4-10977136-6	15.6653336517733	-2.74163992840771	0.677088814512328	-4.04915849980829	5.14021246657011e-05	0.00186089930105535	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69544790137032	1.38601560292234
Merged-chr2-156415866-8	43.3347860042859	-1.41446360016356	0.272136444312637	-5.19762652053539	2.01849154654162e-07	2.21309309732062e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83996655864574	4.47426661202425
Merged-chr4-141500761-4	12.3251513240937	0.129216598302138	1.30483007867774	0.099029444840114	0.92111489140457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr3-106448785-1	4.61057875349224	-2.3427220860998	1.11470748782722	-2.10164739331412	0.0355841750096024	0.290627810821741	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33289104824485	0.469435083901436
Merged-chr17-44101019-4	36.7049743202815	-0.364884970308257	0.516148571548659	-0.706937867159938	0.479605090469183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31916444944682	2.92833609192973
Merged-chr10-19522410-1	3.44415024682072	0	1.37676187553738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45058400-5	43.7867851629489	1.21998665423925	0.388903927408284	3.13698723067527	0.00170693561173443	0.0286760579005227	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5828369889575	4.11104849229871
Merged-chr11-21160121-1	3.56204857881225	0.20967593664759	0.970208225454095	0.21611436714985	0.828898600967207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42650846936921	1.20539659680455
Merged-chr8-108781423-5	23.7904591144952	-0.996820230216598	0.616763897084461	-1.61621040876213	0.106048829097999	0.64886393129568	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82559531024363	1.40264952818025
Merged-chr10-121250345-1	7.34715957548213	-1.57344717271091	0.655329984722195	-2.40099981595977	0.0163503447231824	0.159968502213067	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78847859959582	3.21733612533801
Merged-chr6-118134936-1	1.87228882095224	0	1.42509413407205	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40785933-1	3.41976472896844	0.517181322166345	1.14768865362877	0.450628592110865	0.652257255895364	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	0.73596151290311
Merged-chr9-95700505-1	3.20205434903455	0	1.34870932438502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80668757-1	1.35234950217748	0	1.63867112787875	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80163654-1	2.05122413705307	0	1.51022863239621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182935626-4	13.8952656557736	0	1.28583546978764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134558013-1	6.34007546338343	2.59427377015195	1.08573557781271	2.3894158238586	0.0168751904234469	0.164169449666602	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	1.41926493179619
Merged-chr12-4162968-1	1.74149358502434	0	1.40536512106335	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54835178-5	32.6165681990955	-2.39571585338196	0.55588684630159	-4.3097185503148	1.63462446489786e-05	0.000751168567392515	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93061937781824	1.40508790535098
Merged-chr6-134133917-7	26.8717656543135	-1.02526582937144	0.367919536562771	-2.7866577538932	0.00532546902099219	0.0683946196066603	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84868891867116	3.8954709914413
Merged-chr2-160237940-4	9.60198444920156	0	1.29183938117963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121375434-8	52.1324091942358	-0.337374943458575	0.263412609319132	-1.28078509351022	0.200269161274009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12714476877842	4.78583997644541
Merged-chr16-57441233-4	8.97973246351251	0	1.32469744270345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15395527-2	5.57578361129433	0	1.32371844933008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-9132321-4	9.10197011876665	0	1.29157228534274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70392687-2	3.43244185609804	0	1.34684043336352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129625210-2	8.86390449483248	2.12336994065097	0.791505404828338	2.68269796731393	0.00730309134865064	0.0867686922307136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794807375335281	2.82286752253771
Merged-chr1-91096673-4	9.44606342632208	0	1.30631840590193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20169185-8	25.4517187017414	0.92802046067998	0.34444275652716	2.69426615335661	0.00705438086443892	0.0845625501209818	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83726241522156	4.86372403129565
Merged-chr13-41515943-4	5.77765701182857	0	1.31386248615079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71294893-5	13.8010222670143	2.66199962609506	0.979667763037795	2.71724734295698	0.00658273931568591	0.0804224681070122	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.85297260998396
Merged-chr10-80665170-3	7.67355261896116	0	1.37377493718955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-24990228-4	12.6685103636675	0	1.31163692845962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161728776-8	49.8672591067525	-1.73386583208994	0.349478419168266	-4.96129585402275	7.002444018543e-07	6.04467248131718e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26803123030223	4.51053721668964
Merged-chr4-151999651-4	9.04636303408659	0	1.28930525954795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58756782-4	9.03732619354579	0	1.30176435748644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114653885-3	7.05012408851135	0	1.289886883948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75183054-3	6.89165788410177	0	1.31852009365131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17733216-4	9.5664423422592	0	1.28659450922206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92714027-4	11.7360720213002	0	1.28711185104194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23592771-2	4.65555696250468	0	1.30499156571596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5115118-8	22.9420651364916	0.631644802699767	0.366419385710803	1.7238301993069	0.0847385011239488	0.547296606969631	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30259707732463	4.7954811187282
Merged-chr6-128135849-4	10.782709051483	0	1.28635670145088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13372178-4	9.0763128694109	0	1.29496684359303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5232726-8	30.3746993667911	1.54697264932615	0.36664645532314	4.21924888913147	2.4511756250635e-05	0.0010340951972502	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92203024462523	5.44213006452884
Merged-chr9-121301149-3	11.281980678957	-1.72606860983771	1.06462092366942	-1.62129878481863	0.104953575528372	0.644152939464359	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8697028492305	0.727201944460961
Merged-chr11-88059237-5	9.44417915757547	-2.80589631767838	1.01517757057201	-2.76394632723945	0.005710693193379	0.0719712550461995	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32300946640408	0.469435083901436
Merged-chr10-94545741-4	17.5703487067676	0	1.3086435631087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98761933-3	7.67918332174006	0	1.29022202938367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100024098-1	2.59418401334318	0	1.36607774325446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31125652-6	21.7022833197238	0	1.28678779432942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65189811-3	3.72940440464699	0	1.37624462058975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68459671-3	9.21999049247	0	1.30030348130481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62281567-2	6.7423867668148	0	1.33172002520495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106840004-5	17.5373458643438	2.45973822695814	1.16482442499826	2.11168153257244	0.0347137740537891	0.285334235548406	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr15-59439586-7	26.4422500646784	-0.0238926686553505	0.275133036890692	-0.0868404206392809	0.930798357942457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0684133918494	4.96679962469145
Merged-chr7-128728897-4	8.20462177033811	0	1.29967651336513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92715001-2	5.42882431938155	0	1.30394177823274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32369961-2	4.55652244373901	0	1.32173272378716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112448281-4	12.9298650966162	0	1.2879098237115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-35764838-4	9.40482257083418	0	1.31498374435054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-100518707-4	9.6537973543209	0	1.29601263132815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141765261-4	14.8724754749422	-0.49810385074811	0.467949800730846	-1.06443864271375	0.287130036034637	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5478093251342	3.85036331906992
Merged-chr14-64876793-5	13.1647741808538	0	1.28442081337827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12471746-4	9.55974957781969	0	1.319552691622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9031214-4	17.5894125202883	1.61591097648054	0.433410145207872	3.72836444727319	0.000192726527990136	0.00531612819672581	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5965131653923	4.48298719537215
Merged-chr12-69977671-2	10.9256710391723	0.366259132438173	0.523977341619334	0.698998035499515	0.484553258542833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09530527488668	3.44520488778582
Merged-chr14-46912615-10	50.519834843835	0.432641366980906	0.234481363740496	1.84509915875326	0.0650231155737294	0.449915344163587	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47585840879746	5.90083739943121
Merged-chr14-118910699-8	22.6164924708577	2.6580295035101	0.526050450917262	5.05280339342995	4.35371997760696e-07	4.17765324018656e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42648459735859	4.15204568336412
Merged-chr1-138145774-4	6.55092574556287	0	1.29257759917101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148659226-2	10.8137007808443	-1.99760747011068	0.553768095441856	-3.60729967391273	0.000309400246740584	0.00765634399622702	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27656631675699	3.37158207545174
Merged-chr4-149863730-6	29.8454947234232	-2.25980936683158	0.406902027467554	-5.55369404496706	2.79694857597556e-08	4.24058936532945e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07163664505508	3.2139218085534
Merged-chr14-27280399-1	7.04128883556647	-0.346340089602204	0.971905393675572	-0.356351648890853	0.721577234326635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26928143205996	1.15868211970568
Merged-chr17-42909612-4	21.6714869402192	0	1.28598718583788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101596332-8	28.82319934297	0.804448206541346	0.372526263003229	2.15944025008076	0.0308160280910346	0.262064572050592	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41654047382524	4.27814134979291
Merged-chr19-21461421-8	42.8487244411062	-1.10896140055761	0.251119133370536	-4.41607688618968	1.00508347127232e-05	0.000508043617031993	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67954009404471	4.4778476356264
Merged-chr7-16951467-4	7.25657950738168	0	1.29341241690949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30977334-3	7.82926174529254	0	1.29959893645595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105981164-3	10.7758734701359	0.702223473969229	0.400120248896948	1.75503108354331	0.0792539910869112	0.521806680258469	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03936430470426	4.72786025272506
Merged-chr1-134791209-3	7.29328234013843	0	1.2967484806359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61492312-3	6.72508333059623	0	1.30173730992041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122894986-4	7.7296553251485	0	1.30301351995085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76482817-8	31.016468990634	-0.708570896269314	0.277251312996931	-2.55569897437116	0.0105974753186948	0.116035962160762	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62651906242046	4.80769073535725
Merged-chr19-58214034-4	13.9672352431999	0.084840061606002	0.495035537560836	0.17138175983088	0.863923596136111	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52188278534902	4.6442842022343
Merged-chr7-25785020-4	6.84271329289131	0	1.30289434086915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27616351-4	10.4398057907048	0	1.30281910485963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83134493-2	4.62288218498154	0	1.35308016315285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92985010-5	13.1141943657493	0	1.29203568511918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121330980-1	4.32934675618931	0.855353197688871	0.631278267951123	1.35495429054608	0.17543212073086	0.927190825079166	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06101759291607	4.05890426605077
Merged-chr5-150836968-3	7.95578282551745	0	1.30919721092362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27081518-7	14.3329434165735	0	1.29277601415406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11239734-1	4.3612967058378	0	1.33527894385806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39301705-3	3.92804750896671	0	1.3705024159467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45376026-3	10.3303541660317	-0.12814355111474	0.552092869264878	-0.232105064652195	0.816456411264798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87549761076812	2.4306872510886
Merged-chr7-83647425-4	20.6745784051137	-2.29118111848763	0.525270735280385	-4.36190513690929	1.28934775813583e-05	0.000619968495976042	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89097700021697	1.77167105195599
Merged-chr10-79824569-4	6.85939652469521	0	1.32019793778432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19161753-4	8.20941229014414	1.30951851404714	1.29195916476218	1.01359125718822	0.310777831174642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chrX-12088514-3	11.9882870656615	0	1.29763414489888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126663506-8	40.8127577588487	-1.05448185325263	0.287587113445536	-3.66665196023233	0.000245746906448782	0.0064012766220959	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59587380452674	4.55344403127394
Merged-chr5-107923029-7	21.9869154448787	-0.821216428983838	0.404369155964054	-2.03085823157303	0.0422693778909737	0.328728830058498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48213458696424	3.75090596943967
Merged-chr19-5944362-4	13.400220172596	0	1.30916700525015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72263128-4	11.1037299060325	0	1.28862978691223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157430122-3	4.92811990533178	0	1.30977514315779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123135866-6	19.6696136679588	0	1.28130270151441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123840467-4	20.1757389103454	0	1.31781688956637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79581637-3	10.9846734552979	-2.73253481766943	0.751746203975787	-3.63491668227624	0.000278070487728904	0.00702388639007846	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73867835400055	0.989878296978726
Merged-chr15-59811732-4	6.35431528898858	0	1.29695809991863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143048376-3	8.17473583449612	0	1.30228786053513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26537972-10	50.9108192745357	0.906025617359756	0.261819619204046	3.46049551257523	0.000539182220255248	0.011655111268541	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43133050869199	5.40625718386902
Merged-chrX-143352940-6	22.8851451817184	0.527904525798038	0.278112591825682	1.8981683725019	0.0576739056946311	0.412472260208095	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88307580438109	5.38350870974092
Merged-chr1-170165094-4	8.98638831112537	0	1.2846423255566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139527599-2	4.93464856296453	-1.99973526949358	1.047453957397	-1.90913906560922	0.0562441543861825	0.404645356920859	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87395604499808	0.793480537552656
Merged-chr9-13518209-4	11.1018500850314	0	1.28527453979918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72601275-4	9.69678302468027	0	1.29983176307412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173955286-4	27.2150316457304	-3.83757922435606	0.483011447691047	-7.94511029231491	1.94018080651189e-15	3.33639618374543e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61949580699754	2.46812004905329
Merged-chr4-99224485-2	4.96730357456557	0	1.33213273617445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108636377-4	7.54426059278355	0	1.29230362628308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125282686-8	33.6017350999937	-1.34359915159343	0.307102238634606	-4.37508745480705	1.21383803137315e-05	0.000589735762067732	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02219722097119	4.18192069450707
Merged-chr16-95825379-4	8.62938299690874	0	1.30401485335945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172528895-7	24.6208665966616	-0.569990208835571	0.304314302604717	-1.87303128363292	0.061064065188988	0.429343022614379	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79322255438145	4.19728461706673
Merged-chr16-23493001-4	9.5528147643813	0	1.28768181302038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12997276-4	9.05092320687828	0	1.29299050924695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75791010-7	24.7450681928565	-1.24802392378546	0.376694089518289	-3.31309664396756	0.000922690906813746	0.0179290998080196	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02991311902742	3.81207750071382
Merged-chr17-45746994-11	80.5028993167009	-1.32376285800974	0.212280605771555	-6.23591049779792	4.49157864992985e-10	1.29870220556777e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.94679895896564	5.61999911880146
Merged-chr13-119805850-3	12.2568928084409	0	1.29095373280032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11465004-1	6.63075891557399	0	1.28919199645946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99163283-1	2.7458146471079	0	1.36119403479958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105968196-1	3.27407659548461	-1.46613023098715	1.30616067222298	-1.12247310929361	0.261661334807658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	0
Merged-chr4-43473358-1	2.18600967174994	0	1.40762791016885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137657210-4	18.2498581792958	0	1.29420575563486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47893161-1	1.93424745865941	0.644713239038694	1.31734387117628	0.489403908231658	0.624555769701052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	0.986577844696341
Merged-chr1-131436821-1	2.09169900808607	0	1.41015303361567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59460833-2	2.9284511586875	0	2.37477782459727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120029637-1	1.6286268124474	0	1.53204270450136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33756628-4	11.5157698604729	0	1.28267173937163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32184321-3	7.18536065272931	0	1.29384043574439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94058509-2	5.65152673979888	0	1.35520481152371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67548825-1	4.10995971533857	-1.50473075875928	1.08129123695105	-1.39160543185591	0.164041913101884	0.8825525155241	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1381967896906	0.581381506691384
Merged-chr17-7399160-2	5.50244876921941	0	1.37391315497987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70282311-8	24.8727779518438	0.127186700828171	0.359005667572018	0.354274910723121	0.723132868360215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16563494403967	5.00764071220583
Merged-chr6-17520779-9	51.4008831696422	-2.01600940293953	0.305553609135562	-6.59789098431203	4.17047734763384e-11	1.6976274702914e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.85841599116805	4.71522774578276
Merged-chr11-26961768-6	17.0515029062786	-0.221049107231556	0.368993183473624	-0.5990601375089	0.549132782662506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06961602702271	3.49885743234506
Merged-chr8-84975259-18	100.266457084467	-0.525857539255382	0.165636765672618	-3.17476338734326	0.00149958726608375	0.0259515943740353	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.20911115684204	6.64555903306178
Merged-chr12-71968764-5	18.4554742629587	-2.81727678451019	0.73119838546203	-3.85295815817482	0.000116699338621089	0.00357684567614151	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81637420484632	1.08186277552917
Merged-chr9-122230908-7	31.2400864401224	-1.78950346173867	0.3309820127189	-5.40664867869566	6.42149248409354e-08	8.52883837125155e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76083633136617	3.95415695027709
Merged-chr1-40116628-4	6.89774567657174	0	1.28994316067486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17666803-4	7.00636155078222	1.14173663392043	0.847807370091019	1.34669345207256	0.178078982020995	0.936860893578933	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.864507874037491	1.35032549026822
Merged-chr17-20949884-2	6.60495065580424	0.184740155910132	1.03985564273392	0.177659425326024	0.858990452142788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.937105555727254	0.581381506691384
Merged-chr9-90043025-8	51.5016132907473	1.22044797462413	0.337686354052779	3.61414655930508	0.000301338577892415	0.00750143646131723	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43511916820198	4.58602896437844
Merged-chr6-89045768-2	6.01268876275401	0	1.33464110245715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17946277-3	8.51014304038386	0	1.30883338149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8706112-3	11.2459050644102	0	1.29705628708417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136635884-4	9.77989306409521	0	1.30313746644146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100944035-7	63.6439445811298	-1.98204321952343	0.351587800760698	-5.6374061194247	1.7263066095752e-08	2.82724891502007e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.20748360243772	5.11265591430269
Merged-chr18-39446845-4	7.21930690638495	0	1.2971483101967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43626181-2	5.12098786360323	0	1.31000904180205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-75159276-2	6.21323876895857	0	1.37788821860452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20306669-2	4.99372381109968	0	1.35136130750017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38131276-1	5.49881798532252	1.24848138150162	0.663833574714583	1.88071442761599	0.0600107759986279	0.423804622112433	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74550608575243	3.12819815355747
Merged-chr5-21692491-4	6.64678357921618	0	1.29790779249793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139338097-4	10.035528080068	0	1.28391184677186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150058052-1	4.75476670102348	-2.08414150988499	0.778401785225885	-2.67746239723768	0.00741821788409725	0.0878330976362056	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04662104904933	1.88639437725876
Merged-chr4-137835923-12	72.9609265448702	0.691104537403741	0.206342430738437	3.34930888877526	0.000810134229916193	0.0161448708106446	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20111179488694	6.8827481918381
Merged-chr3-9347051-1	3.29263346591355	0	1.38473865723459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53399828-4	7.1294733219985	0	1.30069701737484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155049274-6	11.3770074999782	0	1.28257100741095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34364831-8	39.0237392365085	0.234948695599498	0.288177455082435	0.815291728953222	0.414905342048133	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62736572364797	5.8799654709506
Merged-chr10-22743737-7	25.4002319917855	-0.622147122068287	0.324425734460277	-1.91768733483275	0.0551506686194588	0.398323867615579	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97878244630727	3.60688506260479
Merged-chr1-165697733-4	14.7590041336527	0	1.29215308237477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113931079-4	10.4858045780115	3.16400054090623	1.05847283636152	2.98921279055438	0.00279697266380707	0.0420937300067104	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.41926493179619
Merged-chr16-93091042-7	29.9719389626509	-0.263746269762871	0.427012786923772	-0.617654266662402	0.53680326466709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78925506457644	3.64219990754748
Merged-chr4-133660243-8	35.2762357985415	-0.720432576030992	0.289127301243074	-2.49174869662451	0.0127115940814165	0.132904292295078	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95558041391414	5.22095866636006
Merged-chr11-116005028-8	43.5030451882281	0.174106570081739	0.328554997599407	0.529916060793024	0.596170130111481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55590172788876	4.59581570591968
Merged-chr18-9505070-8	44.3711318372366	-1.94008136882849	0.432423795436997	-4.48652777506818	7.23932836997929e-06	0.000389844372807796	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14609640751125	3.06135971379114
Merged-chr3-16152902-3	12.2183695086556	-1.36460208929321	0.60399042993167	-2.259310779887	0.0238640598291511	0.214944294086245	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12330573387901	2.44814865060117
Merged-chr3-51553214-4	9.70809437832278	0	1.299245491894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34336513-6	30.3928121865058	-3.54162539692363	0.501549999933791	-7.06136057699362	1.64880126854593e-12	1.01643931787172e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94617633723608	2.10822668382129
Merged-chr2-14204459-4	10.9356795856548	0	1.2959854514243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83636676-7	28.1098851551964	1.66198703379869	0.478865154966428	3.4706785752979	0.000519145020372649	0.0113004831783048	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70104946212184	4.4338626578496
Merged-chr18-11718313-4	11.0046379951354	0	1.30046003121033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49642953-4	12.0628822437547	0	1.28872801807803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21999739-3	11.0353161358662	0	1.2992558789759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118662201-3	7.22792285926849	0	1.31006286709357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90558252-4	10.0641726755644	-1.01104610273019	0.78042780199252	-1.29550241566084	0.195146968574829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21737321277566	1.7464719987851
Merged-chr8-27264345-4	8.22039751613012	0	1.30532220590469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140739982-4	15.7753860102129	0	1.30416546121222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98082605-8	38.1865429868021	-1.54950210743743	0.257002459227816	-6.02913338686733	1.64841197556089e-09	3.91698650745461e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.40538329659761	4.845850138426
Merged-chr16-21319053-3	8.11253245818265	0	1.29589549728639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95977312-5	26.8898917215599	0.166814730430469	0.436045683323246	0.382562508494798	0.702044173115958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19278913047381	2.86015311524694
Merged-chr9-44513326-7	29.2434806729697	-0.2703436308023	0.381220236147733	-0.70915341098927	0.478229281187657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1622820291523	4.00151856507132
Merged-chr15-34067345-6	24.1247783946775	-1.98173368770909	0.639548854294126	-3.09864316760656	0.00194409014571723	0.0317755164237215	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56885810724902	0.958904680953568
Merged-chr18-65328782-4	24.2877561835546	0	1.31334071607639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61321473-3	7.22321274638104	0	1.29302578110764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128442336-3	7.29141679720773	-1.78144842397683	0.835811181566949	-2.13140056422437	0.0330561564392398	0.275975936490169	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49122035733372	1.11812572528152
Merged-chr5-136642362-3	4.50484839421215	0	1.32324936257466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157016847-7	24.8602631962226	0.428026816121794	0.441608677721196	0.969244577191082	0.332423174589927	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08017808667488	4.23278781342895
Merged-chr11-8405734-2	8.71650895792888	-3.71275251279137	0.916520453548249	-4.05092161164291	5.10162975780942e-05	0.00184996544464607	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18811830998851	0.581381506691384
Merged-chr4-130921500-4	13.0019963372859	0	1.30200448413219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-65154514-4	12.9888194592621	0	1.30220148310827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44551377-6	19.4722123065029	-0.526546954722777	0.512953270010251	-1.02650082474814	0.304655575068139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48446268372083	2.53717379407785
Merged-chr1-127128062-1	7.84660136765346	-1.75963249166862	0.738654692304509	-2.38221256833662	0.0172089605328935	0.166647411823127	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58562523198364	1.92027594280124
Merged-chr4-132491961-4	12.1817572213345	0	1.29431076513093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133390719-1	3.3891065295175	0	1.32121917298017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117181850-4	13.585021294894	0	1.29532198990516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35817133-1	4.90630841284062	0.071032849998423	1.4984544405724	0.0474040772112422	0.962191179530729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22162999492511	1.32190966491666
Merged-chr13-42976356-8	32.2819774650239	0.3656402874135	0.311015666156016	1.17563302174651	0.239741553955096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46231993791517	5.90752230026609
Merged-chr19-44360393-7	27.7830976633189	-1.30159731637743	0.372119365886227	-3.49779515849057	0.000469121295647742	0.0104911704946603	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05105194000183	3.80305753052925
Merged-chr18-46450882-4	10.2178370430534	0	1.28476783311442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8864682-4	8.82134446328942	0	1.30379421623976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12435129-11	128.515301781419	0.784097815439767	0.246954836191827	3.17506564168156	0.00149802609468292	0.0259448749491519	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1267401896967	5.98447369909832
Merged-chr8-13551207-3	8.50316697954415	0	1.29010074097251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3768755-7	32.6608395187438	-0.771417156975713	0.45414914192177	-1.69859873281142	0.0893948153916652	0.569522629090743	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11279879286081	3.30457403055127
Merged-chr17-29380671-13	66.16105886594	-0.217539925843556	0.192395275372189	-1.13069266083964	0.258184471434471	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.3903326401484	6.18503794355285
Merged-chr13-47233331-8	26.0309401397335	0.548264629544965	0.411852483412128	1.3312160339612	0.183117937044559	0.95621102078582	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87141114466716	3.43799788569231
Merged-chr19-4333970-5	40.2479484431657	0.890026429937375	0.390414796214374	2.27969441365298	0.0226258188646566	0.20640887331144	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0292156543509	4.03706416164134
Merged-chr17-24285895-5	26.4530474522956	-0.558549064195918	0.262367866545599	-2.12887756244663	0.0332643916005482	0.276940514269531	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03227239133297	5.48740123877352
Merged-chr18-46859698-3	11.3553331971358	-1.2691481681499	0.67886085803855	-1.86952621162588	0.0615496404026051	0.431935111997136	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77497598535065	2.36809407398891
Merged-chr12-70968720-5	25.6240183096809	0	1.2815645393552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118857306-5	19.9731355881902	-1.39357341953409	0.449867850075879	-3.0977395235046	0.00195002741744888	0.0318486607399686	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12243954153023	3.08964381311261
Merged-chr5-123136965-4	8.21123084136694	0	1.29614537435137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12490608-2	3.36755002238311	0	1.32558048524438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38360242-4	5.21742418918137	0	1.30657611809608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74250327-2	4.95729692138933	0	1.34786851041685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-105064447-4	10.7096868206251	0	1.29008469880843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189875833-3	10.0359031937052	-0.114014596972935	0.425833999090004	-0.26774423182879	0.788896200299875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78970804057432	3.6750269376997
Merged-chr5-74820560-3	14.4043215278585	-2.56206816283652	0.50848608779126	-5.03861998263419	4.68900437345651e-07	4.45359999691699e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68693022555772	3.00317800184932
Merged-chr3-59205708-4	9.67851780075222	0	1.30520489636881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70877532-4	7.42998251062732	0	1.31401006356979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88625112-4	16.0115525947734	-0.858319153941762	0.53020374927588	-1.61884776392849	0.10548002231343	0.646251280707159	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66737322584446	2.19839874100768
Merged-chr3-14833013-3	12.3830280687044	0	1.33954439687106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92652692-2	6.45353141389585	0	1.31672837902712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86894647-8	27.3529226582049	-0.687687877373226	0.328090277679335	-2.0960324769067	0.0360793100644995	0.293348089520317	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97307907811797	4.13207568686867
Merged-chr2-70704563-3	5.34948760021971	0	1.30048024450069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119375537-7	31.6623590407627	-0.697287177290955	0.390606714588458	-1.78513873737581	0.07423881598629	0.497355922640979	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27360920357975	3.57735646637125
Merged-chr7-67463836-9	54.993223924782	0.712612021718716	0.292508717457265	2.43620780916667	0.0148421550526739	0.148367058906536	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33707205237791	6.02455616662901
Merged-chr2-145588198-2	4.16512215800868	0	1.34458710241339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144245957-1	3.94323071618936	0	1.33760179794334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80317209-4	8.58114633511675	0	1.29214715470323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125388805-6	20.6163906177806	0	1.28442817776941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56370552-3	7.74503152888853	-2.2963441896114	0.807251091084351	-2.84464674618996	0.00444607007093815	0.0594136799295551	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54183024708641	1.20275690226768
Merged-chr12-102455931-13	76.6569335068449	0.652701503713193	0.221567994874784	2.9458293562753	0.00322090038578666	0.0467925648309504	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07696037110092	6.70895668995258
Merged-chr10-19078076-14	114.732499225157	-0.329771905621544	0.258051887630926	-1.27792867027268	0.201274577965641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.15204439367082	6.82327494905552
Merged-chr17-43327979-8	29.0396851801678	-0.0511939458257623	0.324878256302126	-0.157578861720292	0.874788661347072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45799405995183	4.38043860018692
Merged-chr17-6001591-4	7.19363460396073	0	1.29223388499259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115532107-4	13.7578591630881	0	1.29764061017538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-141014417-3	7.4558937762699	0	1.30232935482669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134063924-3	8.37616575845895	0	1.29442629800719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19302665-2	5.45462357655014	0	1.79423376584615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122122245-4	6.70073263324821	0	1.30058006603158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100931757-4	7.92217878258952	0	1.29957366790021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59865245-4	8.18082074985945	0	1.30093943003922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135951846-4	18.155171768958	-0.456127176807525	0.438495860703194	-1.04020862608841	0.298242984746124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11080966832586	3.49985909124589
Merged-chr7-101465954-2	5.61640579386174	-0.837918131295774	0.789000997223274	-1.0619988241392	0.288236219005285	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31842550917166	1.2481338739303
Merged-chr2-24970535-1	2.82660901919734	0	1.37712956032152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4120904-1	3.86651389828636	-0.65299177375382	1.18663617480903	-0.550288106511593	0.582121780519514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38805374936605	0.986577844696341
Merged-chr2-60809056-2	4.36068115160818	0	1.34041275482016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113764186-1	1.66809479203809	0	1.4749973889597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79017483-6	37.0857820085851	0.625787573671435	0.40505793416588	1.54493350429018	0.122362348331452	0.719674333370536	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4213662315404	4.06266414917812
Merged-chr16-20159149-1	2.0828581647886	0	1.41738612214504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94657908-1	1.47349074286843	0	1.59337923567553	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130689256-2	3.23568545783254	0	1.51839236024215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135666431-1	2.24713709488391	0	1.36967745226548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-53115-1	2.27718286030111	0	2.43325262046733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61934800-1	3.58723163687014	0	1.34795041532004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27328408-1	1.87825646333996	0	1.422380050173	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64186013-5	39.2642403220218	-0.0565259566207143	0.438797109520755	-0.128820257458967	0.897499875951615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11852252759906	2.98076525694038
Merged-chr7-45456397-7	42.7776250077704	0	1.29750139291892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55754592-2	4.65659979164854	0	1.35798893330584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170361457-1	2.8348927287303	0	1.39403855566284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-36931809-2	4.66012445203733	0	1.31802891877516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10694515-1	1.88088060125836	0	1.3756553167768	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106770529-1	3.02761343767476	0	1.34122422671765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121093136-1	2.88415211884748	0	1.3807783101427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-28365604-5	34.1904717073556	0.397531012395583	0.237620448131687	1.67296634410552	0.0943339217680749	0.593492410264485	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54989667949684	5.94210236660126
Merged-chr15-31338998-3	8.4441052440439	0	1.33048878355981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29513372-7	24.4808329069991	-0.0990684451648746	0.360800573356864	-0.274579511454621	0.783639309003806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46258874832491	4.28767874404817
Merged-chr3-87334834-8	47.3514131015719	-0.439199285497971	0.226817886882684	-1.93635207317285	0.0528245951112736	0.385770674132911	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28236087954178	5.70766826167364
Merged-chr2-4617095-4	10.113689913675	0	1.30671198459099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115505125-4	11.4944487019236	0	1.30641201193951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63492844-4	10.3883948250072	0	1.29040307216457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59741701-4	8.29225738342338	0	1.30525309185632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35665668-4	10.1516211256084	0	1.30407485267468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84274103-4	10.5184085121971	0	1.29016471115049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8839449-4	8.80003775747045	0	1.29447696941179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41154208-2	4.32637077828029	0	1.3794474191614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122038756-3	6.37210427469941	0	1.29894413850458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20500714-4	5.71564246494198	0	1.29919772410305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7858538-3	5.16570117271873	0	1.32139794763519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113580511-3	5.55669118677013	0	1.33948194780148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128467654-6	19.997057479834	-3.26415813819326	0.687509162710753	-4.74780310610427	2.05638075916022e-06	0.00014387179559752	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73276655076335	1.15868211970568
Merged-chr4-139169964-6	21.6432084553406	1.59116147289461	0.411901868915549	3.86296249901415	0.000112020209725216	0.00346398712759736	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25233682621525	5.43854630751561
Merged-chr12-5294218-4	9.54846236863107	-2.67446609007519	0.809932840751493	-3.30208377227141	0.000959694033284245	0.0184655295527214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64402725000537	1.15637648126681
Merged-chr9-10566021-4	8.63694946520439	0	1.30354452209994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70150898-4	9.80289553433466	0	1.3009748332531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117146219-4	5.50727925594188	0	1.33366821294393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117330075-3	7.35006492547676	0	1.40627842104505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-160116259-5	21.6738488591857	3.38294728743265	0.565144290833775	5.98598860910667	2.15079420775447e-09	4.78046932992937e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03830591447195	4.49332944335254
Merged-chr1-138153304-2	4.15124884405824	0	1.32668511091129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32698731-5	19.5743943647467	0.043998051500009	0.451288720048093	0.0974942415917689	0.922333906991176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14149732493336	2.60280255630439
Merged-chr14-72564155-4	7.87409381332298	0	1.31501268654791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29393782-4	14.5938620026666	0	1.35562649505034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68206915-8	35.8519128623555	-0.801902596094068	0.30084653704087	-2.66548720813472	0.00768768563441131	0.0901436942736711	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86514059463046	4.87685748399382
Merged-chr14-33319699-3	6.51633070822485	0	1.28971133706349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54961533-3	8.79107063892725	0	1.3028079108047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64088636-5	28.5255965549379	-0.245584886046554	0.49947402793676	-0.491686999344135	0.622940630190532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94674834262556	2.25049756766703
Merged-chr4-134759752-4	9.25268001407786	0	1.28981269983097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35844140-4	23.4927680961748	0	1.3037716265711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135937583-8	40.3608306119122	1.03389976259242	0.313691457954555	3.2959130265581	0.000981023810317236	0.0187784939204791	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96716203214683	4.92339089926145
Merged-chr11-43362031-7	22.7330884352672	-0.941219545411029	0.403232140189216	-2.33418780796928	0.0195858900271693	0.184412432075177	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45199221604185	3.65559239930071
Merged-chr7-101466400-3	12.0780109876452	-2.21355581254996	0.594635910987921	-3.72253974515663	0.000197228850293837	0.00540608911547864	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70344605664435	2.22392366263603
Merged-chr3-152406173-4	8.49506944005392	-1.96282539230435	1.1159603055721	-1.75886667518887	0.0786001566130332	0.518861080314705	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12203515284301	0
Merged-chr9-40651579-12	59.2817140314908	-0.316777916629885	0.248876146056866	-1.27283358268295	0.203077101549516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70541871807097	5.40502401225396
Merged-chr16-22545921-2	3.81903968850906	0	1.3431776008291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105861966-9	29.0920051979862	-0.863302346401755	0.299098113425027	-2.8863516941512	0.00389736378236389	0.0540256965893829	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2469370186914	4.23456716417502
Merged-chr8-35209086-1	4.85224001790146	0.988215322186111	0.975506451987164	1.013027971443	0.311046800542832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.727571417065705	1.58492111464609
Merged-chr10-67640867-3	5.10022710382011	0	1.33422925964623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7235027-4	11.0546341368875	0	1.28778892829535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21013295-3	8.09327279429498	0	1.42437646139071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53492206-4	8.49945217622963	0	1.29173418314276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116681176-4	7.92337603428052	0	1.29573594160867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61443603-4	9.8729144685129	0	1.3299551135975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13454746-4	11.44013195152	0	1.30037691135527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27237431-4	7.1756857864082	0	1.29682819690484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73927218-4	8.09578357366856	0	1.30278216306505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146517078-4	9.59780456415709	3.12759216912174	1.09522258090421	2.85566808396118	0.0042946383971754	0.0578872608708382	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr5-97025078-4	13.8282129051346	-3.53115950208623	0.682716047425924	-5.17222279364887	2.31325530422404e-07	2.48213433677872e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84531745279225	1.52765326036496
Merged-chr11-117775758-3	8.54489384850455	0	1.31944747876135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62189265-12	75.8153822493738	1.56792021954269	0.297201944240513	5.2756055265703	1.32318442473969e-07	1.56923429072667e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75366302835634	5.42688439551096
Merged-chr7-35157703-1	4.77490981344076	0	1.30724967156718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20958485-1	5.1778566861373	1.83933178277509	0.867314760496443	2.12072002755063	0.0339453701039388	0.280997486041549	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84549803888929	2.08364730863447
Merged-chrX-135738924-3	9.06267912521391	0	1.29571926172582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64018686-2	3.96770585651562	0	1.43417478853367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149461829-4	8.07173854457274	0	1.30419260786182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133012504-1	2.99747705501185	0.979783696793835	1.10620463751484	0.885716497261286	0.375770316224343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	1.04220233489076
Merged-chr9-103347271-4	7.81451947375463	0	1.28976754543339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100824627-1	2.84807162394554	0	1.5187319299788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127266569-2	7.83352910808869	0	1.29872724879766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28523209-4	11.4579881757166	0	1.30964997584073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63034770-2	3.36637512084586	0	1.43968194376612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100878798-2	4.77067030429163	0	1.33931153900058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85430230-4	9.69588612195059	-1.76162252186212	1.14719408270464	-1.53559240622031	0.124638377798378	0.729020715683206	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913105633848431	0
Merged-chr10-19187298-4	7.48848184605907	0	1.30131521222864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59583736-7	34.2155472527137	-0.572043398397755	0.351771244503628	-1.62618010237007	0.103911347709869	0.63949810957328	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18141102615541	3.70580960282214
Merged-chrX-57306931-4	7.36698696927019	0	1.28981703562224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-30597166-8	20.8224976067606	-0.176632173220885	0.368235385185626	-0.47967191727608	0.631460699559088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83717464267792	4.62792012607427
Merged-chr8-46769493-3	6.99444585764951	0	1.29868447885117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40710178-3	17.5286988051058	0.757367060481339	0.426667730519382	1.77507462202355	0.0758855666742696	0.505383024856994	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76503390916908	5.48301909697874
Merged-chr6-51173151-4	16.1747456996063	0	1.28650752058386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127609787-5	19.1909193709225	-2.95566467195219	0.559344014547108	-5.28416251015994	1.26281115719678e-07	1.5085860672428e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87215357329405	1.58180101474665
Merged-chr13-36700058-2	8.40238465398592	0.0800018263060533	0.586610258603295	0.136379862323812	0.891520992466219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10442903182361	3.01714140010888
Merged-chr2-129385583-3	12.5370488693959	-1.4244251498805	0.390960595642633	-3.643398249737	0.00026906204365611	0.0068457479675306	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34376553814703	3.68121240558349
Merged-chr11-103409250-3	5.99511181020431	0	1.34187947805732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139579355-12	84.9680514904288	-0.708284973835851	0.20304861672951	-3.48825313486075	0.000486187551285412	0.0107661855085994	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.87587885741539	6.12196894965109
Merged-chr2-132007640-3	5.46797041268065	0	1.33446806440401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11332050-3	4.83674303878485	0	1.30283588158121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22376612-6	28.4534576839038	0.668888342241981	0.346109622594648	1.93259100173982	0.0532866017915146	0.388017191962148	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52132795549921	5.1435587808855
Merged-chr12-67059352-1	3.9619865645985	0	1.36034458233934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-93013473-4	7.19793405252626	0	1.35795513003215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130034193-1	3.35716120128002	3.04941099479834	1.24416644503753	2.45096707676146	0.0142472984057137	0.144341699475933	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.61425725761568
Merged-chr1-144313575-4	8.92239562958107	0	1.3065905705318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20117462-5	37.7983661851199	-2.00959610437997	0.314739892649461	-6.3849424598303	1.71461928258691e-10	5.49232900195707e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07705690031277	4.05840701686442
Merged-chr18-39483761-4	16.6800431277167	-3.74007100662939	0.73054707251998	-5.11954827733172	3.06268362369286e-07	3.12709568865365e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76020103203068	0.666688015277142
Merged-chr4-120053463-8	27.5507940071452	0	1.2785579274455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83563988-3	11.2396147615873	0	1.29466878522243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118376661-4	9.34933168109105	0	1.31136491106237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102827968-4	8.23202507925807	0	1.34627209168186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100665162-4	10.223061908579	0	1.30129642358908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141549647-2	6.37277257261633	0	1.3157141672522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70745495-4	11.7015569781651	-2.30807995618805	0.730393010776787	-3.16005208447075	0.00157740937707591	0.0269765488496211	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52388425500068	2.21565186750098
Merged-chr19-44416404-6	17.3582620764285	-2.77272649220115	0.726816465133996	-3.81489223925323	0.000136242373725323	0.0040532263359744	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0514044595011	0.735627456805112
Merged-chr15-5432197-4	11.5238104905734	0	1.30797142820694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106663872-3	7.63742776654697	0	1.31228899433159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-94768811-6	42.3159327102721	-1.44004053418575	0.307665651285443	-4.68053722659382	2.86124148506586e-06	0.000185855552766515	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88744700420912	5.4263894541115
Merged-chr13-92919990-2	6.67532774367006	-0.882749806997531	1.06333796177675	-0.830168618754593	0.406443455144538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8609117836454	0.773587911294612
Merged-chr2-3519506-4	8.56257979300253	0	1.28631094817657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125426641-5	28.2053524086767	0	1.27588750364194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129811052-5	42.3941517032018	2.03958071378307	0.468873018782771	4.34996391790248	1.36159934526284e-05	0.000648034019049857	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8128009857259	4.29777616207893
Merged-chr1-171762111-5	70.1919509655447	-3.74721670694035	0.502458681020163	-7.45776090350795	8.80051802055229e-14	8.71848062130894e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.47121120045116	3.75090596943967
Merged-chr3-108401895-3	7.73441810700543	0	1.29050806037657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14893887-6	20.5717958369583	-2.05045640871266	0.552262595831492	-3.71282868727598	0.000204955625239056	0.00557114404611953	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10356200615613	1.99834080004871
Merged-chr1-147010819-4	9.93769635958102	0	1.31885772625765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7964659-2	4.97219791539643	0	1.31737643424428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116269701-3	10.1119580175373	-2.50680852779563	0.847351534683966	-2.95840442270584	0.00309236121454997	0.0454199676165391	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57220906402414	0.735627456805112
Merged-chr10-51433178-2	5.19376784329953	0	1.34319580230243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164917028-8	31.5450388467874	-1.0396809942273	0.325390002207994	-3.19518420102755	0.00139741621051832	0.0245670055669977	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09569471271663	3.90585602189587
Merged-chr19-34248737-8	35.5166794344342	-0.167820294083853	0.308806842929146	-0.543447458909966	0.586821756981252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84420453704244	4.65722431821391
Merged-chr13-112427660-4	9.17385247078464	0	1.29727138249594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4189810-4	7.86776918669384	0	1.2960973846012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122052026-4	9.22229783514606	0	1.29760357510835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-63511095-4	10.0004355821684	0	1.28353179905244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104979304-4	15.8041484897327	0	1.2912257899984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65565002-6	42.5112413334627	-0.646582363985111	0.329470137107701	-1.9624915619401	0.0497052820523316	0.369095609203598	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48093100520642	3.78997997655858
Merged-chr10-121516421-3	6.69792739482442	0	1.29405642312032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11516271-7	23.2568934906519	0	1.2862265253005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167339565-4	11.111874274799	0	1.30143897825126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78321060-8	30.9369474724835	0.663709401103581	0.282917598301391	2.34594597539504	0.0189788581653147	0.179868377907274	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38664123668289	5.01222067710745
Merged-chr9-22343012-5	13.5092844557697	0	1.2839100840834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86903813-5	13.3893286402526	-2.14497728036284	0.551377994483795	-3.89021198129422	0.000100156690409139	0.00317094917222655	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57580542895801	2.51813555892491
Merged-chr16-43108023-3	6.6470126131424	0	1.29289515622808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122800455-8	25.1680547952134	0.200305396170553	0.369812481287537	0.541640442943329	0.588066225354856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28619350773827	4.3122687233092
Merged-chr15-6402950-4	6.87225044801574	0	1.29609828601022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117390411-7	38.6480729322653	-0.339002037680661	0.385777499278936	-0.878750156020753	0.379536757267236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30517073886298	3.93609199289421
Merged-chr8-46899294-1	2.12310685526812	0	1.35487190048116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85770388-2	3.08555691311751	0	1.34879134100208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34314601-1	2.6633774539004	0	1.35619794861032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106394851-1	2.39852051337801	0	1.44774147966432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139741978-3	21.0708317973809	3.05816533102253	0.968600083766222	3.15730442550802	0.00159235011922629	0.0271468069112866	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.69736543272236
Merged-chr7-47067555-1	3.10377664378412	0	1.35637718423975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5791109-1	2.6837184947661	0	1.46091833046219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-113027497-1	1.5726765464973	0	1.50298416183652	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71007980-3	7.17131553585399	0	1.31750529747983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26744563-5	20.0733716665695	-2.0006788297065	0.660913188081369	-3.02714314948757	0.00246877015324309	0.0382013389613599	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43709624239525	1.26501898168246
Merged-chr11-99177291-3	4.90719068200433	0	1.33629906292706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47647704-1	4.74940435238885	-1.07885472526314	0.857243856633332	-1.25851555180593	0.208205366457012	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06938842821099	1.27256041875316
Merged-chr11-96404507-1	2.46679652539785	0	1.39498480198762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47351596-4	24.6726864443312	0.869768329772901	0.291089746513237	2.98797309143058	0.0028083427883216	0.0422356657872642	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3659046416568	6.24501211507006
Merged-chr2-150895101-1	2.66850952658396	0	1.37419391854091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101600027-3	6.24446400300786	0	1.29863029839776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32555770-3	14.3377376804514	0	1.33226830241779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55453198-2	3.54512862801476	0	1.32601200221409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-157496689-1	3.13169000405381	0	1.34470947481333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38610336-1	2.78363352533246	0	1.3694272740072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-81673942-1	2.26010166278366	0	1.38079623282987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15948399-3	5.45280946032671	0	1.33460989668951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25782243-3	5.46617177198141	0	1.34310619504795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8353715-4	7.85626236593325	0	1.28848166880326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_GL456239-36269-1	1.08313764724896	0	2.43325345487787	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167371686-2	2.82516822628333	0	2.02811782053786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92374777-6	61.0871313049448	1.95893587866519	0.446326397670591	4.38902087998607	1.13862138042324e-05	0.00056351143589113	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19543669870157	4.16109431507429
Merged-chr1-64797407-4	8.79239559173617	0	1.28525835678516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58735279-4	8.00373516440821	0	1.29755545695681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18655042-4	10.8044017929055	0	1.29392237828842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43571171-4	8.44852394148638	0	1.3021175782289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114697118-6	28.0404129745052	-0.102574569538242	0.269588874799829	-0.380485172522063	0.703585301035699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79982143354244	5.67580560837866
Merged-chr19-17244385-3	9.77051198872663	1.26480945980033	0.528954065013252	2.39115179078668	0.0167956074042182	0.163516948962462	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82919440338943	5.26376277316336
Merged-chr7-90138533-4	10.4659776126137	0	1.28932365761908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115491927-6	32.447725205732	-0.0984709610929568	0.432972007780415	-0.227430317257131	0.820089148113872	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00681564347161	2.93672497792174
Merged-chr11-69785009-8	27.3774809056184	0.349688888454473	0.314152916666453	1.11311679727535	0.265658270442297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49584915605654	4.99198944506618
Merged-chr16-55754028-3	10.4203358026102	0	1.29148181476729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121366425-4	10.0025008999663	0	1.30343538865698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61665135-6	18.0620245696699	-2.23774997885904	0.511531556026149	-4.37460788586158	1.21650947926761e-05	0.000590156113082562	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54343058997843	2.49065419848114
Merged-chr15-41784363-3	7.87441853666822	0	1.30672155256815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166729788-4	8.88328964251581	0	1.29525920935683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82940096-7	43.5565100136522	0.181225730704043	0.276051262629338	0.656493033134139	0.511506948710495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07727366347712	5.23244948160186
Merged-chr10-127636786-8	35.2588378190771	0.14497852054055	0.296755162305617	0.488545909072484	0.625163215841068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83500828607298	4.94637597583905
Merged-chr17-71195253-4	7.79935486447947	3.37281512782181	1.06650353603521	3.16249783883553	0.00156421896661551	0.0268282027801726	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr2-72196596-7	31.5094808837876	-0.226445677963987	0.334546911174097	-0.676872720687429	0.498486713511967	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36119771518994	4.03877760210029
Merged-chr8-126598499-8	28.5682501715063	0.403774315470847	0.333505508710353	1.21069758947077	0.226011326602081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9980724963299	4.2598956157756
Merged-chr6-29198778-4	9.23818233327222	0	1.28797370798036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4071295-4	9.60067554064772	0	1.30036496607075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120524357-8	52.4792887513833	-2.05910613377372	0.373253877942411	-5.51663694728288	3.45548240539468e-08	5.08562957799371e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81970367937944	2.95603210165854
Merged-chr15-80445080-5	21.4232856584172	0.116451048696198	0.414292298811046	0.281084270768234	0.778645765135947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65871463098711	3.67157851277979
Merged-chr2-163535121-4	7.81557949497732	0	1.29413298855898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139233918-7	29.6028761061381	-0.964923956080553	0.383582867113494	-2.51555540877443	0.0118844994688022	0.126400472377661	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16056032216832	4.07125801836978
Merged-chr1-167342017-3	7.24173165384558	0	1.30540376870031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74960879-12	74.2402384735668	0.628830537129927	0.205694544072768	3.05710849047833	0.00223483372979534	0.0352705378398575	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23869074419632	6.86785424815523
Merged-chr13-45031074-8	25.0065396836885	0.0468323955924357	0.374635769517444	0.125007805989158	0.900517370533404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59230595954702	4.55001388771
Merged-chr10-43504473-4	14.4342935937872	0	1.31672555819042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100454426-11	53.4268809216637	0.203814453573594	0.279600703951753	0.72894828479675	0.466033297314554	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52450589246255	5.70057558824581
Merged-chr4-99177454-5	36.2927719616278	1.52672604849714	0.301377423473648	5.06582752915012	4.06629959333363e-07	3.97779061715538e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24224725035814	5.78014830339723
Merged-chr1-144239375-4	16.3365261375977	0	1.36322101609431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106034484-3	10.2937489051043	-0.315586029032792	0.999111697912842	-0.315866614005276	0.75210375369414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892597230197813	0.581381506691384
Merged-chr3-98084031-7	25.4961968483729	0	1.28844875915524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108718282-2	4.10881004390801	0	1.33180294842647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115634282-4	8.57040202483715	0	1.29410453682009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158138010-4	9.12519985067798	0	1.29993825495827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95706486-8	28.1257254014126	0.133303584214396	0.332011337765256	0.401503108633738	0.688049749892812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51001623181318	4.46370318477014
Merged-chr11-77335251-3	7.11134852479253	0	1.33861307431351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132982825-2	14.4474665191612	-0.297419995179984	0.545034958089729	-0.54568975946497	0.585279212386246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42837555520544	2.64297019641287
Merged-chr6-26454556-2	6.39819299964744	0	1.31804064085702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114794104-6	25.142978087823	0.678261233080487	0.390695578466221	1.73603508834981	0.0825576305311681	0.537171256067879	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6279772163862	5.13596911208159
Merged-chr1-13652302-4	12.7285493903238	0	1.30314798957832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89025709-10	54.1665059028181	-1.36061955872314	0.291948612149184	-4.66047620061257	3.15478639239088e-06	0.000201517763047091	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55854231000206	5.13671402624037
Merged-chr17-57093776-4	10.4938794062194	-3.26181866889845	0.89175600240988	-3.65774792665675	0.000254441097424496	0.00657182132502019	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86243017993453	0.918668513615376
Merged-chr13-3637091-6	19.3681843807286	0.980079276367856	0.494393635980705	1.98238651357985	0.0474359978541354	0.357114368176997	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59188868106718	2.86290348626014
Merged-chr2-58496788-4	9.54018214703514	0	1.30898486012373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8973986-7	28.4402706548397	0.0906368445599199	0.363749576313724	0.24917374606575	0.803226386665648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60624567857056	4.64793920622281
Merged-chr11-18011358-5	17.3012387417257	0.76640645404848	0.452922794074451	1.69213487171612	0.0906202608840756	0.575615946313965	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54981864920691	3.73484659834735
Merged-chr10-122882807-4	16.6686531870329	0	1.28567144417911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26711672-4	9.05509383405811	0	1.28577376392352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72109718-4	6.59313338824725	0	1.32015304630352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8345640-4	9.12753230134461	0	1.32164565115797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124599191-4	8.5505542870267	0	1.30326708057684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70855712-4	8.29982376567572	0	1.29038045506869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59188812-4	11.0177992910303	0	1.2806487052486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130788546-2	2.64495436990905	0	1.39812859693521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75277616-4	8.34809471132412	0	1.30263187329839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35117696-4	10.592178345917	0.651324739571069	0.988805976829578	0.658698222738722	0.510089574487528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	1.03295826569721
Merged-chr3-27773365-2	2.49713469181517	0	1.52251413230269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75721197-4	16.0545755809875	0	1.28961089148751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59204842-2	3.24290809291705	0	1.41296273600691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-51982048-1	1.1780740511065	0	1.80516446234256	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19216492-6	15.3814211062184	-0.915829568171802	0.5071695984822	-1.80576590338339	0.0709549135068541	0.480618277104445	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59530685914242	2.4360226934973
Merged-chr5-123277509-4	15.3842071922032	-0.561517367095752	0.440546132198888	-1.27459379632517	0.202453054406901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9546396846763	4.25894511413138
Merged-chr7-99435025-5	22.0196982243392	0.405511507142469	0.550924783535082	0.736056026632983	0.461696602228075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74052463490973	2.72389951615654
Merged-chr5-88601414-4	6.55935242210777	0	1.32257419569323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8433520-4	10.8490187862951	0	1.28534623615936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19120116-4	7.33890370305625	0	1.29952034124225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118589450-3	7.96760296859908	0	1.2929812297085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124790282-3	7.74380846525449	0	1.30727086439698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91057666-6	23.1358915289063	0	1.27779993259269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45627009-4	7.260982917078	0	1.30532966504674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17410395-10	46.5287402968845	-0.310701028110048	0.261159029431257	-1.18970050082772	0.234164128477571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7685760967997	5.51801470180997
Merged-chr7-126194357-4	8.87257183825283	0	1.31120444479282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165663933-4	9.45548655622756	0	1.28801540664438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80194025-4	20.8616918861162	-2.66966171955317	0.44430446509447	-6.00863130868049	1.87096052029669e-09	4.35088206972624e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6373358266244	3.05186991320511
Merged-chr14-52244579-5	46.366444488896	0.597726764947987	0.358996796722617	1.66499191749008	0.0959143683550192	0.600690021749951	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5899455450092	4.0005199834363
Merged-chr10-81519759-4	8.22210108052684	0	1.29210037513487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-15202385-2	6.36815158225037	0	1.33691017243306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45523056-4	7.23640848842918	0	1.31246644841192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70213828-2	4.02675611726851	0	1.37892735090033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8638890-6	16.0297683312537	3.74418842568347	0.574213181497684	6.52055464125316	7.00478832634135e-11	2.58607286990453e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24838157500853	4.82964895416486
Merged-chr11-11777391-3	7.02557552364997	0	1.29060088782606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84267929-3	8.88146431664935	0	1.30978478482913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15355320-1	3.84737028727456	-2.38316560069456	1.27865060000972	-1.86381299213126	0.06234797060809	0.436068766708365	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16393209869515	0.793480537552656
Merged-chr11-96400915-3	13.0788940975948	0	1.32332422258412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24595524-3	4.60291728339699	0	1.34417155026931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122058042-6	21.8488093089715	-1.65480799189574	0.547229673043581	-3.02397343092167	0.0024947834718143	0.0384853920559908	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60960734634807	2.48095192489459
Merged-chr7-84163769-3	6.22261323144426	0	1.29493492556856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127762451-15	90.0440470278121	0.28956181095468	0.156173957858422	1.85409792340141	0.06372515175793	0.443564525646963	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.08318525799866	7.37606647542406
Merged-chr8-79501411-4	7.47671430782658	0	1.30058547032433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71528860-5	21.0177522771169	-1.63213299316397	0.550646463124716	-2.96403064845313	0.0030363804376974	0.0446998929701767	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54790204483958	2.53350380922037
Merged-chr13-54207268-8	27.4073536502104	-0.535851312512143	0.329918660168314	-1.62419219403585	0.104334796330557	0.641801901630104	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30935934997041	4.81575681070065
Merged-chr3-31327991-4	9.34307229872371	0	1.29630366255845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115653589-4	12.1758631973971	0	1.29140263820414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106232616-2	5.03331590422628	0	1.36026985335629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84854707-3	6.99912470274432	0	1.33471725614205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128724368-3	14.0450774820045	3.52380388194614	1.07703666627139	3.27175851324103	0.00106880825473861	0.019994945380518	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.34805514843284
Merged-chr1-52765447-7	31.4337102315197	-0.0172144053565935	0.321075362179895	-0.0536148436918946	0.95724202996662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62760201917776	4.50662221229985
Merged-chr5-130089361-4	8.86482831964257	0	1.30431781217956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45981218-4	9.25080166279986	0	1.2897111764178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26452926-10	45.3877573463324	0.635036295830704	0.265025295354928	2.3961346594492	0.0165690019005161	0.161841255334997	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25955652234082	5.84280771808116
Merged-chr6-67060212-3	5.53850556662871	0	1.30387891443506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87149452-1	6.42716058200037	0.6453915217626	0.891954128642492	0.723570305958281	0.469329576849557	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92950954446263	2.34574658350842
Merged-chrX-38182007-4	6.96353121009807	0	1.30676081752714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12910322-4	11.1561783269005	0	1.29690565887701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26023916-8	31.6594952146991	-0.466521578894516	0.317289517640182	-1.47033404180584	0.141471305606158	0.795685576768687	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25543358931739	4.6052266451372
Merged-chr4-139216762-4	13.9062419703636	-2.9811705606889	0.600527676649425	-4.96425173494417	6.89664431139003e-07	5.99292711665017e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73934862546323	1.72583980988184
Merged-chr8-92875992-7	41.7082504044621	1.95865807890353	0.412797005654445	4.74484565554997	2.08665378515239e-06	0.000145100055788898	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1856142385928	5.03342208775641
Merged-chr17-50675440-8	28.6158605504041	-0.0157868103318791	0.309168312068929	-0.0510621875386744	0.959275966638258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86479460971846	4.91118754832941
Merged-chr13-21941034-6	19.3480334690417	0	1.28230137882337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157049128-4	7.16878537180704	0	1.30093810759725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22331151-4	10.2249926579111	0	1.2897460945724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127359600-4	11.3283506831176	0	1.28793465519259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55255258-4	10.1679422271169	0	1.29224655895813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20939253-5	20.2815503921807	-0.00731507931023179	0.363031466349258	-0.0201499869523548	0.983923724404557	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9984855365116	4.80674189741661
Merged-chr5-129730549-1	10.7311507863462	0.710888439178875	0.694727938262213	1.0232616252012	0.306184162638787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4174285846058	2.79169352973302
Merged-chr9-5334559-1	3.38245304468778	0	1.3525097731133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36239166-1	5.29519677538152	0.460304479495107	0.591212964753848	0.778576430046244	0.436229267866674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98922925696633	3.42943515619929
Merged-chr2-79048877-2	5.75522741478716	0	1.3174626174447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38892231-4	11.4937259843633	0	1.2958973147359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71984605-4	7.78954479658003	0	1.30766355635551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5232467-1	2.29606930212637	0	1.39096216124032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94487343-3	5.99587687749191	0	1.3093230960436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58396684-1	3.44687501489052	2.81423630412614	1.44249147775326	1.95095523788426	0.0510623707918199	0.376520162690393	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.77777167463237
Merged-chr2-169723977-1	5.2450208796044	-1.67383398446548	1.02129633260601	-1.63893076967624	0.101227678651379	0.626700510578213	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51881492093369	0.733321818366247
Merged-chr13-20031857-1	4.91290325598528	0.00578191127690871	0.67834119573774	0.00852360333301078	0.993199230846318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65017118428141	3.71055674032291
Merged-chr17-40873820-6	13.7745440219144	-2.65936151844892	0.946849522319332	-2.80864219262079	0.00497509066592046	0.0648906735838799	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89140287829861	0.688405034366054
Merged-chr6-116141006-2	3.68252633372002	0	1.38528148609821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9886259-8	35.5668616759343	-1.69978947751654	0.279842184386057	-6.07410023347872	1.2468483340373e-09	3.07458683909439e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37825818914526	4.70179735587055
Merged-chr12-102356988-5	23.4164494653586	-0.0968633502329832	0.534991143949387	-0.18105598817566	0.856323629926673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97565356778047	2.67384833470829
Merged-chr10-78148153-4	10.2969283043507	0	1.31578425514941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36185394-2	4.35272406905836	0	1.32201643238865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76565535-3	8.15496940380938	0	1.30555209632829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18858757-2	5.01802543471946	0	1.3113445465017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114892281-2	11.4816991159937	0	1.28649595125081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-121029216-2	5.82922665218437	0	1.303213532153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153803158-4	8.57046822111826	0	1.32093571173734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56896533-1	3.09829673611722	0	1.36729973636779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21938179-6	25.8923175702283	-3.28736692709556	0.577763482005732	-5.68981430893367	1.27177594681094e-08	2.18124595853826e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22380316783581	1.88474138445191
Merged-chr2-170159142-5	15.6541584126587	0	1.2807794291398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62192192-7	24.1164716850991	-1.28829984966371	0.392266042113843	-3.28425025709928	0.0010225407974593	0.019334187196405	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49958093594139	3.43935206184991
Merged-chr13-95842178-6	31.5052173006593	0.0329946366633639	0.370102832456347	0.0891499166444654	0.928962767543354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8530495317507	5.90650197166877
Merged-chr13-61804285-4	21.627356324137	0.97040254734411	1.00419114597473	0.966352423275129	0.333867862300429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.04220233489076
Merged-chr14-122638346-4	11.3579605794509	0	1.29577090365424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9189274-2	4.46007771521558	0	1.32302370942414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-101902302-4	12.4533761888266	0	1.28851554160734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71296993-2	8.42281800266929	4.19712587163727	1.0534053297802	3.98434083536775	6.76676930839304e-05	0.00233317987022254	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.50724812564465
Merged-chr9-13314149-7	47.8585156616051	-0.635016335194259	0.242117728427644	-2.62275852048576	0.00872210680663888	0.0997820012931766	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.74622016596546	6.01413761953395
Merged-chr2-165112352-4	10.1517616790694	0.478524918151081	0.710778316227194	0.673240737971704	0.500794147907741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51387577754861	1.22548804685604
Merged-chr11-64600532-6	21.4133928983083	-1.47217819771386	0.468005884437914	-3.14564035766768	0.00165723654408166	0.0280118414923849	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32545615661875	3.49434837322938
Merged-chr15-98389955-4	9.41725883752155	0	1.28909226355484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48275112-5	19.8699960609884	0.0626728166844585	0.448363732825661	0.139781191242842	0.888832874595645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70237943080487	3.80278416999245
Merged-chr3-90446558-7	18.2202967226221	0.251499302903337	0.419142444732751	0.600033010409373	0.548484235956907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71343405395033	4.09951874329829
Merged-chr14-105297533-6	48.8030597454298	-0.838181405804226	0.223089252761609	-3.75715726073052	0.000171854505489486	0.0048488793245751	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.25953895436372	6.42687679536054
Merged-chr2-24304861-3	13.1813325156204	0	1.30345208252194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114982074-6	61.7538353570435	0.68649770883655	0.261085811655307	2.62939492760673	0.00855369604803861	0.0982337121186522	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.82476052846322	7.50880626629625
Merged-chr13-34044118-3	12.9289342652472	0.957152517365789	0.476129628794438	2.01027715874205	0.0444018629753921	0.340869847038295	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81232653453897	3.75506388709536
Merged-chr1-95381207-4	8.42212114822564	0	1.30766883110623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53191346-2	5.30665048906522	0	1.31118572065849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61132157-4	14.2729402089	0	1.31392750642469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-9926275-4	8.62092722828124	0	1.29709686099835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87718740-8	36.9858974690989	-0.607079136269955	0.298676216734132	-2.03256604395237	0.0420963850101644	0.32771388788113	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02074011928411	4.32833099705406
Merged-chr13-107168825-4	7.39569016531808	0	1.29713344786511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116434943-6	24.7141619040217	1.33660194710398	0.394680368893907	3.38654276332469	0.000707792445497325	0.0144445362721637	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15771713136199	4.40382733021051
Merged-chr13-93901457-3	6.83332705693023	0	1.32439837188797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4370278-5	31.0875193528012	0	1.27976042460558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27692390-4	6.23806301930122	0	1.30363550302643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111592641-4	8.1125750569343	0	1.32306030257703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139398062-8	64.0993809399981	-1.14417773363229	0.282050470320043	-4.05664182135202	4.97833381336163e-05	0.00181183764814581	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78232180050997	4.640590056737
Merged-chr2-163433950-4	9.79156332440084	0	1.29979124412589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137388441-9	45.4080994924409	1.42338648586623	0.311479889389311	4.56975404947309	4.88296923081873e-06	0.000283881234303453	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91030077254331	5.37126451981735
Merged-chr6-72115066-4	9.68510471806049	0	1.32820371130789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173426674-11	40.5428207964415	-0.261654923405279	0.325854275849045	-0.80298140241834	0.421985483891531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95431939917138	4.79307979983898
Merged-chr13-20784539-5	34.9272937222096	0.625921116800814	0.372212571639274	1.68162271909348	0.0926420222408942	0.58501986715824	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37581439989317	3.8532385433737
Merged-chr15-100049852-4	9.35156317665415	0	1.29518571511098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83878319-4	7.669211425557	0	1.3005214309142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69154967-8	33.0480383913863	-0.267111177709057	0.32579321290119	-0.819879503720875	0.412284802206404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52846432148759	4.53205968791777
Merged-chr1-36134751-4	5.50576372255423	0	1.33967639057946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45393816-2	4.88625243306782	0	1.35061243469075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97123529-4	13.8257222265503	2.50105678763443	1.00556885260446	2.48720590455503	0.0128750856787797	0.134031347268312	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	1.75485430327507
Merged-chr7-98872084-1	5.13830210402458	3.84337995920433	1.07529065018967	3.57427078764835	0.000351205319661518	0.00842060059090128	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.02938698498506
Merged-chr18-80524839-3	6.45234422256016	0	1.34984310030914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34435416-4	12.8140645757053	0	1.30188079017957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3130865-2	6.22252087462394	0	1.38258788480179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135581282-1	2.31049515573411	0	1.36263450497266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32887431-1	5.39481525465747	0.875916508036325	0.667179687784566	1.31286447125645	0.189228620696227	0.979354779662257	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77676094055695	2.26087918380575
Merged-chr6-76513206-3	8.1403790363619	0	1.30833558996332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182506784-3	7.03935116669332	0	1.29443966470204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-40530952-7	32.3026642829659	-1.8199481324893	0.507137837641743	-3.58866563960657	0.000332374791489133	0.00810726507079092	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06564269027121	2.0509200531463
Merged-chr7-80775458-9	40.168431283448	0.894448155075876	0.29472223755654	3.03488519390833	0.00240627264371865	0.037411442345096	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7391758405404	5.52901448815082
Merged-chr8-108721029-3	7.71310210631524	0	1.29705783956735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129375290-3	6.16222751232579	0	1.29738267763459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58814644-4	7.61968122847149	0	1.31577628448844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96106605-4	9.97854140261878	0	1.32198406551585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106791623-4	10.0603849612228	0	1.30099135050314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-87056039-2	5.33351736723425	0	1.31111715423493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122946006-5	21.3694948475324	2.10736381317046	0.511404737516275	4.12073580586139	3.77664304200893e-05	0.00146028707824329	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69587579829948	3.90412740212786
Merged-chr10-121599470-3	9.68121137571522	-0.716753727109638	0.844476695803186	-0.84875489243422	0.396017694679715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15215204112904	1.17564474993106
Merged-chr13-92968625-5	19.300280619279	-1.4759726215929	0.582219243964795	-2.53508044760223	0.0112421505118637	0.121246008804793	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65099976882345	1.59510946442266
Merged-chr19-37509881-4	6.40279932463299	0	1.30345098634078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87597713-4	7.17910569230919	0	1.29689664078191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25801236-3	7.50221620736834	0	1.29034674527792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120510857-4	6.78048627307893	0	1.29024315577464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25117764-2	3.79627991407787	0	1.32545422337916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87745490-5	17.263751258507	-0.0154857230547152	0.495518875488958	-0.0312515301045485	0.97506894488045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37110842553862	3.29492926749591
Merged-chr16-87712193-3	4.63292014278777	0	1.33643897742873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68715588-3	7.49585905509765	0	1.29598512703403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32343682-3	10.2204718353798	0	1.29786117415039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11581346-3	16.3613167980608	-1.12844968428307	0.445786023548923	-2.53137071301481	0.0113617694825371	0.122252797529316	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4742594044924	3.46209722589946
Merged-chr13-95942104-6	18.3617778966218	0.603559936997133	0.510477281992883	1.18234436337864	0.237069089437713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89750391290161	4.19189160018641
Merged-chr12-44176499-5	20.9383777503497	-0.861953112780413	0.491173946636192	-1.75488361848894	0.0792792167593994	0.521846511625003	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0456916791716	3.23968450994415
Merged-chr3-137952993-6	17.9887047515551	-1.18902396441041	0.47546798346189	-2.5007445417315	0.012393253828196	0.130452571626498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04024172117431	2.31747866375397
Merged-chr1-191458445-7	27.5191245551453	-0.394990394342434	0.314959327331787	-1.25409968864437	0.209805773534694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45806373039192	4.88983905759146
Merged-chr10-93422204-3	10.0176361178518	-1.27943419204891	0.600213728374733	-2.13163100336505	0.0330371929467536	0.275926432809121	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12885762304509	2.51622356219184
Merged-chr5-77246375-5	17.1257695568311	0	1.3070127284813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67302554-4	7.74835171247457	0	1.30006152594462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9495181-4	11.0028452384927	0	1.29160182437597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129526196-3	11.40640087212	0	1.31453730290224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93095383-5	33.816068013974	0.426617619861885	0.749525037055332	0.569183948194637	0.569231312794102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40527858924302	1.41695929335733
Merged-chr1-140261361-4	7.15871911507001	0	1.31211267664369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97607335-4	7.37370430696308	0	1.2918358732824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122329255-3	4.87099003775878	0	1.3112653081269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10711208-3	9.41852841755065	0	1.29320848512627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45093984-4	14.2425036640527	-2.51678648749454	1.12945369296471	-2.22832197829041	0.0258590517531095	0.22840030271204	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24352882166568	0
Merged-chr11-80355014-4	7.17806640883552	0	1.31165649040704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84314755-4	7.67372675748507	0	1.30207814423951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88058070-7	22.8586346836072	0.0263265901750814	0.340060356916889	0.0774174044095227	0.938291495617543	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12140359027424	4.04125271970938
Merged-chr7-128226549-4	15.2858417892778	0.13878536123987	0.701353306604576	0.197882237002295	0.843137202187584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32410148991245	2.34574658350842
Merged-chr2-14272278-4	8.75338987974101	0	1.29955553404599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61086366-3	7.14814595677016	0	1.30420447379196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5145984-5	17.1592571313309	-1.15324433849622	0.508605621452754	-2.26746282355699	0.0233619674683792	0.211602847946973	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27158626149937	2.60723990317186
Merged-chr13-94813949-4	7.3807330717513	0	1.30639922522351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45179465-6	21.0979058474469	-0.632427325162534	0.357926191145325	-1.76692106028574	0.0772414494584517	0.512012553896529	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73361279358258	4.18813624938837
Merged-chr8-36172465-5	33.7270456439462	-1.31400427758989	0.262256491350756	-5.01037846888782	5.43230952309319e-07	4.95781701251463e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60096501078499	5.34690599230852
Merged-chr11-89023606-6	34.5322107833482	0.0765875184981908	0.363676879910478	0.210592211737638	0.833205490161461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19352973103424	4.40193961722189
Merged-chr13-37772891-4	9.83675424331373	0	1.29035929960581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55395853-2	4.89201325446346	0	1.30940332204458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90108492-4	9.25526375633462	0	1.30538225258213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31880688-3	7.66489318212604	0	1.3054618636313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106901642-4	6.32560058951641	0	1.2980135730936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27114817-8	24.0307432777284	-0.332467294063856	0.335764344607847	-0.990180462586513	0.322085920271393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85684205101681	4.56497550699154
Merged-chr1-86228908-4	8.49530724139056	0	1.30106325697868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73613337-6	21.4710244071243	-1.62926795182824	0.382245272796405	-4.26236259224071	2.02276878800233e-05	0.000886518103425892	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23378573580285	3.51422312804055
Merged-chr1-40081254-3	9.77426051811547	0	1.30029657607829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167552418-2	2.59123197190683	0	1.5468305298897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99200952-1	4.74916098508527	0.248195100101687	0.74632767908529	0.332555132359393	0.739470116482184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19579377637285	2.1359713465465
Merged-chr1-164080132-3	5.77150480352744	0	1.36453994108787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97205427-6	23.8060545475267	0	1.27888380863117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103378487-1	1.78313882115617	0	1.41561218257526	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-30941147-1	5.8385206183139	1.76143646097736	1.08872160630728	1.61789428148835	0.105685382887867	0.647246207140634	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	1.45575152610536
Merged-chr14-114869548-1	2.67555979990693	0	1.47421182229533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166789172-1	2.42442002968002	0	1.39623404033524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31228934-1	4.32617719306707	0	1.37310502109508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76631313-4	9.64587456111679	0	1.29528503162917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-153719779-1	3.22482724061442	0	1.36664055230005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119809313-3	6.0623076106402	0	1.31040773498859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149617218-3	10.5586214356333	0	1.28805316286598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102741867-2	5.3413895851368	0	1.33372158155101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130795005-3	7.61318734206047	0	1.30690312037775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19225162-5	29.4361110147332	0.585314808694341	0.3589149883454	1.6307895398647	0.102934735344166	0.635222704296903	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33668109881304	6.00653039279541
Merged-chr13-3907420-1	2.59739789633006	0	1.37219018935887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75501012-4	14.8269797040766	0	1.3066269411454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174614136-8	32.0230586079453	0.63016620625221	0.300549070265546	2.09671653848549	0.0360186755900682	0.293149167655263	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75336281849167	5.36700910986885
Merged-chr5-129779228-8	27.9312151228609	0.493487382123914	0.36533377814619	1.35078498524832	0.176764319179924	0.931895215904099	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34273877676943	5.0069778153769
Merged-chr7-141491082-4	11.2439527954449	0	1.30254169719131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89029009-7	53.9942506527301	0.200302621521248	0.354727626081955	0.564665976917655	0.572300980062774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31113307791535	4.6498631620363
Merged-chr5-31767377-3	6.82225291591288	0	1.29590150732456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139087123-3	10.619793841318	1.43097943908938	0.539332033134089	2.65324392243842	0.0079722236669709	0.0927953202247738	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63123677584567	5.03866390979577
Merged-chr11-109332929-3	8.52983706631487	-2.55845189901427	0.935598757241549	-2.73456102758989	0.0062463515238708	0.0773643075585408	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82929072621265	1.20539659680455
Merged-chr12-52120438-6	17.9174365835852	-0.7223414951276	0.424968758329147	-1.69975199581173	0.0891775844819775	0.568486471571495	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33839335920356	3.53737587062995
Merged-chr12-73054061-4	8.89268673135511	0	1.2887168364115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23410237-7	31.9898389714824	-0.221339023781192	0.384013291077912	-0.576383757863955	0.564355820338907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53154252955831	4.39628998680276
Merged-chr14-55735292-4	7.90486856691338	0	1.29883730608619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12585385-5	31.1166887368712	1.10244877452608	0.461612707552494	2.38825482160435	0.016928599501658	0.164559364840173	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45947053465276	3.82515864588891
Merged-chr14-118713528-4	6.14704383187304	0	1.30593023613873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53122492-3	8.50228065329411	0	1.28863306635627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95716338-4	10.2825744581563	0	1.3181340732771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80641464-4	6.84508396369942	0	1.31387771303847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43668777-2	5.35041516108212	0	1.30121466559148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152870980-1	3.50195553171599	0	1.34418632740621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38949196-2	6.52277622204789	0	1.31537871875122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81110357-4	10.9950671234004	0	1.28894439526423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145030850-9	52.8736149282699	-1.81101955279518	0.350622582455136	-5.16515376766102	2.40241341084043e-07	2.56098053417257e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40409712075823	3.32608564733171
Merged-chr5-150840783-4	9.32433104583884	0	1.30403520410986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53410907-4	7.34679542275549	0	1.30083808327275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5035201-4	10.6103650349312	0	1.30341756169225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40553790-3	8.08335874965218	0	1.29128217360461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95781932-3	6.86027913138967	0	1.32475772754535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115489389-2	6.05612700757986	1.21046724764392	0.837659812857138	1.44505827910639	0.148441516500108	0.823015385815039	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30560977453817	1.84786608550645
Merged-chr3-136215283-2	8.75818336893832	-2.39846210476889	0.789595083431109	-3.03758490281703	0.00238482212681006	0.0371531344861741	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64324974513153	1.42539729206526
Merged-chr17-73027309-9	39.6388514650608	0.425770706064605	0.298022448287869	1.42865313841506	0.153103952989405	0.842078184668433	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88166375793287	5.32239141774309
Merged-chr11-74988265-3	7.92833134510596	0	1.31495005539911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90840220-11	53.9514504440491	-0.75671505820975	0.263153775546238	-2.87556223215498	0.00403308633382237	0.0553319461620736	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34712920188953	5.47250635787707
Merged-chr1-33765748-4	8.49614292942486	0	1.30922042855511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64654920-3	16.1051939939951	-0.193736910358551	0.494092953235619	-0.392106200037553	0.694979746634404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35830700500228	4.05366359471242
Merged-chr3-126660395-5	24.8297848160642	-2.12767080927859	0.452513122324326	-4.70189858439871	2.57753521641696e-06	0.000171170341719495	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72917517372643	3.58811246304114
Merged-chr9-66831084-4	11.3094141072191	0	1.28351205614482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17560178-4	8.48802861207026	0	1.29934837891051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108306472-4	9.75115686532087	0	1.29389854847424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134519984-2	6.65883704104137	0	1.30283341512925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23526574-4	8.74996829916339	0	1.28928250237554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123893701-8	32.8038270265872	-0.488706537089614	0.31566048036596	-1.54820310899557	0.121573403122195	0.716545106920084	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04559469649102	5.55851054810498
Merged-chr6-108400010-3	10.6825846337449	0.876904253398393	0.826729517229297	1.06069063112353	0.288830519115346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34236539217739	1.65326585997348
Merged-chr2-180251446-4	7.3989351684808	0	1.2925278383456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62892657-5	21.0226290279644	-0.65514505279	0.486242939359074	-1.34736157537539	0.177863809561727	0.936105710343157	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90152826121438	3.36136366976121
Merged-chr19-47147927-8	25.461259420041	-0.583931586695977	0.334600178941809	-1.74516220685444	0.080956637784087	0.529575088545703	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87195693764614	4.27999251450976
Merged-chr1-51934676-10	81.9884577896022	0.381019379866455	0.217778721576833	1.74957120285982	0.0801923324286743	0.525865344193091	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52898845773365	6.04557981286015
Merged-chr8-25096990-3	8.16228679706159	0	1.30497106040733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67235272-5	16.0579109469977	-1.8817844512553	0.566858313524475	-3.31967337579509	0.000901228237437206	0.0175534010144774	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15290962273114	2.17540470129796
Merged-chr2-160348303-4	7.54426847465431	0	1.30386146883522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121332187-4	16.2945936818438	0	1.28267756697958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98510651-3	7.58596758242702	0	1.30199694070551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81359006-2	5.3410964124214	0	1.33426535452864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42248903-4	10.477760510756	0	1.31625162225854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141559467-8	44.4746300679163	-0.0172196790123954	0.310567039810399	-0.0554459321340348	0.955783203542142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83848433925239	4.67330117972917
Merged-chr2-31025741-4	12.9380988735567	0	1.30080676049043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133659652-7	32.1107235693851	1.35983151740572	0.362197353878934	3.75439384866475	0.000173761463408335	0.00490056822955593	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60558162416831	5.98591149281508
Merged-chr12-84855345-4	14.3763637270107	0	1.30923416641135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85444848-4	7.52138554802389	0	1.30286360937788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85304892-4	13.1925572107036	-0.619341409552187	0.492422303878176	-1.25774442927226	0.208484198725946	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17328663802364	4.57696799951766
Merged-chr11-117706443-3	10.3945585121451	0	1.29689288496998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74724814-5	29.5509144512154	-0.350453406901045	0.394911654286955	-0.887422295839349	0.374851584068382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.267377285668	5.90180212174071
Merged-chr17-5747549-2	5.19917570369247	0	1.3168121210601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149170377-4	11.2954852508383	-3.40457565849708	0.979649481852762	-3.4752998103548	0.000510282698433122	0.0111521515758564	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46080938449572	0.609949614787909
Merged-chr9-111554779-8	41.7259408168221	1.0465930032709	0.261531830140379	4.00178059668355	6.28675818301749e-05	0.00219569481682235	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8827765652074	5.84750634608885
Merged-chr1-170162018-4	8.29880052735158	0	1.29783508788317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33316649-4	8.2650214642256	0	1.30390115048902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157064234-2	4.15478794030634	0	1.32168741734135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32774953-8	36.8822757093831	-0.629621118317225	0.332047894013344	-1.89617561101569	0.0579368270429337	0.413776681680102	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22701821709753	4.62544907673947
Merged-chr6-135228501-10	60.2937645877319	-0.348101749329643	0.26514524161521	-1.31287194599111	0.189226101535497	0.979354779662257	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2947321433199	4.89507172755365
Merged-chr6-140491124-2	4.41780428971975	0	1.31333751533685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89261977-4	19.8215258361158	0	1.27958375269437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65381725-5	13.4816779892239	0.901060311006825	0.566136143214953	1.59159651226279	0.111475394262932	0.673490302653987	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92549338334759	3.37920855875892
Merged-chr10-121446112-7	27.3399568386866	-0.822513350778168	0.327193870862926	-2.51384094882007	0.0119424279547423	0.126810188029021	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07900134448084	4.19001432765801
Merged-chr14-46818818-2	6.40147861076976	-2.20981270031911	0.798315517028923	-2.76809438521668	0.00563851235195542	0.0713505476667077	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38262921842269	1.41083941945204
Merged-chr14-74983227-2	5.73753114585718	0	1.31560501212436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165404519-2	3.53574850146697	0	1.36018664129731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91764189-1	3.64403700463673	0	1.32175023977842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124715256-8	39.7912853810916	2.28013140415877	0.405029181611978	5.62954845644469	1.8068200809437e-08	2.93702649276982e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88357294461445	5.04339626408529
Merged-chr7-117490818-3	5.9058964912154	0	1.32134642448788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88655329-3	6.41201700365294	0	1.30172588863305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126436380-5	17.9256910840524	1.21176543011743	0.645191999898976	1.8781470171781	0.0603610558747113	0.425496608110991	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53092355733973	2.94908359290188
Merged-chr2-117403944-3	9.36084693982418	0	1.29016768837252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19613291-1	2.77481150316681	0	1.37653487033981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29975892-6	23.6046969842117	-1.39806114194986	0.369757651863969	-3.78102017605898	0.000156187014277375	0.00450207174017176	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28112631369552	3.7576543370785
Merged-chr4-123632330-2	5.20473952338042	0	1.32776510979805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88650401-17	101.480809811476	-0.78796808306039	0.276564040486812	-2.84913426081496	0.00438383764811643	0.0587864262166665	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.40920636602319	6.64858793497331
Merged-chr1-135268285-4	7.41149591042557	0	1.32221244661471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102889083-4	8.30022346854946	0	1.30996246844669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52189672-3	8.14696604582612	0	1.29226145696462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17679386-5	28.7277682814071	0.571207221554406	0.284854865907928	2.00525702706105	0.0449355763398651	0.343378464598912	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69426256717814	5.11957019052753
Merged-chr13-107954462-8	39.0789376965781	0.701199240623034	0.350102970550453	2.00283716393656	0.0451947694182118	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58153584564413	5.35026348312207
Merged-chr4-109760709-2	4.608906999032	0	1.32511200649093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70361640-4	6.98839583607039	0	1.31272147631346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95644292-4	14.6971777781828	0	1.30251208186212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66877602-4	9.482151885774	0	1.33039768642427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43898729-4	8.21570803646027	0	1.2927103380731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128680113-3	7.33109609565679	0	1.30690577605164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165741819-4	9.4549286699276	0	1.31755583081195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21654027-4	9.26939071654798	0	1.30399390210781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46905897-4	8.88342205567767	0	1.31130942474209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102173865-4	11.4694046385344	0.123640175001127	0.633771155195421	0.195086466128303	0.845325257484976	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50296416713968	4.07683367856279
Merged-chr15-75062349-6	25.1232290982042	1.21267651211795	0.342931938590469	3.5362017230076	0.000405924605920185	0.00939955680313976	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23028674586467	5.41601415531482
Merged-chr2-36271371-3	10.3973162482423	0	1.29228128801377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84083570-8	17.5641968043305	0	1.29528149525181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5238003-3	5.5378836363849	0	1.32062925712864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10833817-4	7.98308017181246	0	1.29279671339658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43293313-2	5.06098884448415	0	1.33637193532514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104223879-5	19.1068127922859	-3.37699495718226	0.739725082320875	-4.56520271907909	4.99011888958521e-06	0.000288570184919323	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62858717510929	1.08974267817771
Merged-chr11-64065388-5	22.3782025248589	-0.326877920535073	0.554423747200654	-0.589581384609723	0.555471334968244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23990892077185	2.57897495851616
Merged-chr2-66142408-4	12.3811422912471	0	1.30215931206192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34181849-2	6.17040511828174	3.46530285700629	1.10277581591673	3.14234571251058	0.00167600017204616	0.0282632018690396	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr19-16140283-4	8.67115633743287	0	1.30743758739735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48202163-4	8.50739683449551	0	1.30122146180319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30973876-3	7.59442485563761	0	1.30747391786615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3140019-3	11.5712911460215	0	1.31060381448786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129572754-7	23.3969345934185	-0.437283456130095	0.381892263394084	-1.14504402954833	0.252190918927615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00947585747721	3.74991339513314
Merged-chr2-71837994-4	19.2399236847577	-0.324683547277018	0.511628973905921	-0.634607428110045	0.525684482335293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5454076799683	3.31805786227732
Merged-chr7-142449341-7	32.7832845811449	0.720198160484561	0.314699499678201	2.28852655063324	0.0221068757430828	0.202750302078244	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43927917277401	4.93626200951801
Merged-chrX-159737578-6	27.2437489312538	0.229126643787609	0.347708112398347	0.658962605753397	0.50991978170738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11012379822926	4.35715214230125
Merged-chr6-136449526-7	39.2721516748411	1.81955012159328	0.384045489514806	4.73785051841659	2.15997040870952e-06	0.000148106428465406	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49426358134178	4.7767729967266
Merged-chr1-176824108-8	67.6945325427473	-0.327534940128123	0.272154805256308	-1.20348762469823	0.228787677452481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14044488233451	4.65545078856367
Merged-chr4-40776633-4	7.45352270634488	0	1.3033731572445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93980028-2	6.71421696166384	1.32792067427913	0.915472291827676	1.45053071090555	0.146910581510497	0.816553377360337	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850239143718389	1.5713323725813
Merged-chr10-6916746-3	6.33943262437043	0	1.30171204098264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61084498-12	50.133324655643	0.483621639188472	0.223976959445525	2.15924727429876	0.0308309882501805	0.26215767835996	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79490996977909	6.25017539884636
Merged-chr1-131703705-6	42.8929405644645	-1.55526175054941	0.358997986375322	-4.33222973268555	1.47606802725119e-05	0.000691434704722269	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71837914566427	4.19032981398628
Merged-chr9-75631060-7	25.2778751504179	-0.139619724331953	0.369322654597342	-0.378042675135037	0.705398892126419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00410631315436	3.88700646773285
Merged-chr6-47650944-10	60.9762074037978	0.557147623923198	0.336079434496267	1.65778553144223	0.0973607626889066	0.608060441428777	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27639711024117	4.53903584044684
Merged-chr1-159201435-4	8.69090113616196	2.32987329339298	1.03159907323433	2.2585065786151	0.0239140948973392	0.215335599443507	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.46928333126936
Merged-chr11-114167065-1	1.72400066577125	0	1.48231385252416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-11337011-1	3.46837887434259	0.99057433394742	1.0216962978726	0.969538928554418	0.332276367027647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18513028472963	1.00182956598795
Merged-chr6-94583119-1	2.29165197478073	3.34354709332264	1.2608233100287	2.65187601365534	0.00800459296373713	0.0930229649312407	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr15-88491109-4	14.5500019284399	0	1.29181271970996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27933669-4	7.33914662882839	0	1.2976332993686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44384501-1	2.22490593619141	0.182789276871818	1.55496407017791	0.117552090352097	0.906422568003199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0.306240821987646
Merged-chr13-100449654-3	14.3239436199267	0	1.29337111144355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82192709-2	3.02951178941901	0	1.37291997403036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77279023-4	8.82389349498513	0	1.29553151572404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137839804-1	2.09101756591139	1.6902868760278	1.27522312468352	1.32548323764697	0.185010925438991	0.963687161487051	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12978751052117	1.92027594280124
Merged-chrX-142518071-3	7.06571656968277	-5.08241679080496	1.03975802427094	-4.88807652565956	1.01825951450863e-06	8.12444276374611e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8400091865623	0
Merged-chr19-56797557-4	8.03811853101166	0	1.2901466079906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66170510-3	13.7212570112443	0	1.31583781161899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3281036-1	3.20701411378134	-1.31567859329942	1.30034813020276	-1.01178950677944	0.311638708200063	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10450937279159	0.420961122473315
Merged-chr10-94050104-2	9.98596182669236	-2.31017370997333	0.750721131443006	-3.07727278907523	0.00208904029455911	0.0334666406198234	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55631928218614	1.20539659680455
Merged-chr11-76900221-4	9.96176276506998	0	1.32249211972232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19199309-2	4.91523892454479	0	1.34111261169024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126770248-8	35.9447017956822	-0.691973747459151	0.305178834658742	-2.26743688903895	0.0233635501474828	0.211602847946973	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08092005661294	4.46797892634877
Merged-chr14-71209244-3	10.4596453858002	0.908680130241449	0.52123233099537	1.74333032739199	0.0812759307788772	0.531211939655582	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87568472677072	4.83878058955483
Merged-chr17-27173873-6	19.0667280852247	-0.558667205962	0.40345886198334	-1.38469434830525	0.166145947972041	0.890499763466286	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03734062201916	3.45294980363373
Merged-chr7-80457456-6	19.9460518627166	-1.78028892050231	0.556069723172773	-3.20155701041317	0.00136687024287282	0.0241338835154734	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88223729666778	1.52944205045577
Merged-chr16-52056737-3	7.42338154631761	0	1.33039934170837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34059961-4	13.5164073296452	0	1.28958543568801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20111832-4	12.4349589652341	-2.58755368747808	0.696047382845519	-3.71749646827184	0.000201206798743485	0.00549208833362231	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20097118303882	1.207189364431
Merged-chrX-10857293-4	8.37208881812287	0	1.2960565706026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92956823-2	5.98750464449651	0	1.31941792394696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52030270-2	5.13427228347989	0	1.32228891483521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53509798-8	79.7975210229487	-1.60588305054828	0.308609838359838	-5.20360290223743	1.95461439761183e-07	2.14665936850996e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80131156049866	4.1779042795211
Merged-chr4-122860242-5	14.8894289339759	-2.15231094023877	0.753162489334241	-2.85769800105327	0.00426726309835315	0.0575895444909098	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03566675689035	1.08186277552917
Merged-chr15-84769864-1	7.12110697157592	2.44328562921989	0.994500917596574	2.4567957515058	0.0140182361798682	0.142418479696777	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84906062149299	2.70336127771059
Merged-chr15-27922383-4	9.05797000885013	0	1.29874992188713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29728137-8	27.2452787701503	0.279885256886882	0.406615694890693	0.688328710386158	0.491245805825829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78535938046249	4.14236783925955
Merged-chr10-68241134-8	76.336739812656	-0.139082413060258	0.284525226977502	-0.488822782210645	0.624967167382475	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91595347985166	4.71442430505194
Merged-chr16-91362816-3	10.5470983099447	0	1.37099678614359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20532018-3	15.6999382366912	0	1.36657479266267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59042843-4	9.35450425958779	0	1.3157688010157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122980040-4	10.7013267139714	0	1.28718843194341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73597601-4	9.99248235933747	0	1.29780760174175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122436823-4	9.05479923175742	0	1.2886238920732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47703793-6	32.8258428279597	0.680258648736271	0.2775954174982	2.45053990756415	0.0142642149573113	0.144445899674642	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10233490282209	5.8080789840181
Merged-chr14-59555178-4	9.09811999474314	0	1.30590859772168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149241183-4	8.10943120241079	0	1.30189669322179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149343960-3	8.89267285123628	0	1.28669901327768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30722564-6	20.7147406140964	-1.88736875929373	0.505950042273664	-3.7303460847877	0.000191216928739509	0.00527671512897463	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61636598458213	2.67252980017474
Merged-chr13-43565594-8	50.4836120100135	-0.266420450167486	0.32270058513418	-0.825596427278578	0.409033062496236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.57013694677427	6.24184149701991
Merged-chr13-56184468-8	32.4157295199187	-0.0453897044158461	0.346497146565598	-0.130995896692768	0.895778553399206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49928992387825	4.4381544439643
Merged-chr5-5358152-6	19.6756710316035	-1.34285443392486	0.401270066778576	-3.34651035574467	0.000818356227548017	0.0162591383537102	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46284883401818	3.13178612559225
Merged-chr14-120268690-4	6.29322107439368	0	1.31478697208487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98943642-6	17.8036041578219	0	1.30357801626667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97465335-1	4.3264591807171	-1.36453625137074	0.842662253815285	-1.61931574031302	0.105379345689567	0.645972369727985	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2653373548082	1.37490486545505
Merged-chr17-10722753-3	8.19755455854435	0.0272311654376054	1.01510191116114	0.0268260409503679	0.978598483014384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994475741705525	0.683637474991079
Merged-chr11-48874688-4	7.0092565056804	0	1.29517474374619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61132977-2	5.29327686938439	0	1.33052069079866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106155294-2	6.10411853625567	0	1.31042063615146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94513006-2	5.77049726568086	0	1.34826681640258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-87204461-4	12.6215431316802	0	1.31089180439427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44993532-4	9.26207325259969	0	1.31466550824684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21194535-4	9.54593801833584	0	1.31501403081754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101769651-4	9.73774895966153	0	1.31188436763483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35097086-4	13.5916329414776	0	1.28680398274412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32715365-4	8.37446707941902	0	1.29047231869171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13835854-5	15.5822611227546	-1.04337069821057	0.547353183926799	-1.90621106965207	0.0566228266162631	0.40637838858499	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20757823961391	2.54198101964455
Merged-chr16-52082043-4	7.94834015178079	0	1.31173606311719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81137183-2	3.92186244925073	-2.58873589929914	1.67831006363575	-1.54246581450577	0.122960438999368	0.721920291720817	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07919575399043	0
Merged-chr5-102037729-2	7.66310053284901	2.25880850364302	0.899337251746276	2.51163676280173	0.0120172711362548	0.127459925283185	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0036590798926	1.57995335165535
Merged-chr7-19474201-4	14.1750360667777	0	1.29207196591399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110682540-4	12.0749430811593	0	1.29109511273327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95567165-2	6.11231427616992	0	1.31230006531698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53216589-2	4.65468938598922	0	1.31794545518999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30190203-4	21.0131878163273	-4.72634624004191	0.728273273133053	-6.4897977371997	8.59516870069102e-11	3.10748962613043e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69775471953805	1.03295826569721
Merged-chr8-83216951-2	8.57768425321958	-1.83671638268558	0.713452036324581	-2.57440765345294	0.0100411887453441	0.111344225310241	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76888191972706	1.04181016172925
Merged-chr6-135163451-2	7.58603809974298	-0.666579949588342	0.699890610013068	-0.952405904654008	0.340891166058003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00547993496118	2.88307314437858
Merged-chr14-25736780-2	7.84150418644757	0	1.3195140797221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121252055-4	10.0314579721734	-1.53527088215296	1.14900990437856	-1.33616853632199	0.181494192606304	0.95023792244624	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	0
Merged-chr7-49888234-2	2.37129820114301	0	1.54254495528875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4311349-2	4.70999036565616	0	1.35749185968362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-42866218-2	4.41080361862539	0	1.30667882650862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91789477-1	4.41090723732259	0	1.3119199945924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90612376-4	10.7249477638353	0	1.29069686569939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56286884-3	6.69419323129113	0	1.35047518587871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96328902-4	6.26246243089425	0	1.31409683056889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106615617-2	7.5881457333896	-0.320308418680119	0.867300474868302	-0.369316549410119	0.711891791488975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28020782549871	1.41926493179619
Merged-chr8-72006165-7	35.8855831439299	-1.2690324757974	0.398369203488743	-3.18556872540289	0.00144469785438891	0.0252083380488378	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33640786434876	4.04461235741871
Merged-chr16-49896378-4	12.7263226314028	0	1.31655630812085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66369230-8	36.2641248568549	-0.47738117068301	0.280256217502776	-1.70337405869785	0.088498089182394	0.565187268932048	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04555296120917	4.50668115336756
Merged-chr16-94617550-6	14.6516721401297	0	1.28717029015445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6355555-6	49.1098169674307	-0.868164514026432	0.399991255822793	-2.17045873225552	0.0299721116482885	0.256456410602208	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39481051352488	3.51279473983383
Merged-chr17-29394319-12	78.5441791025214	0.399705622169581	0.250232018996455	1.59734003574995	0.110189931090569	0.667328196204292	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0019441356968	6.42034006436163
Merged-chr18-79995857-6	19.3476922192554	0.435027131483749	0.358140773245924	1.2146819462665	0.224487420846813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37820228371982	4.80995466530602
Merged-chr13-92030918-4	9.97157618767533	0	1.29148867765891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22721998-4	10.4292962457242	0	1.29268002822038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99208665-8	36.5479125689483	-1.15638912665938	0.32433859857569	-3.56537622021427	0.000363334612255896	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4648873741404	4.28537141844098
Merged-chr14-87465836-2	10.9670361157834	-1.31637884721742	0.67179892146018	-1.95948341857445	0.0500561998836042	0.370942666998639	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30591146819122	2.30095837608674
Merged-chr5-91976890-1	5.85577787791265	-0.546448321884949	0.789721289945707	-0.691950855120693	0.488968192245112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72313588538352	2.21043983090998
Merged-chr15-93379403-1	3.08685320805294	0	1.36852380524312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126086276-8	40.5601150364997	0.0757013154890012	0.361850467683972	0.209206073363752	0.834287371470431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17942038869118	4.29025258860506
Merged-chr5-135772673-4	13.0034598496146	0	1.28918390812779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120760006-4	10.3055028479184	0	1.28805915688028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123611285-5	15.8333557692167	0	1.28900442120553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180423392-4	10.8159724065851	0	1.30787031601412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54475940-7	26.8732582109269	-0.532739139439474	0.317464507254721	-1.67810614183722	0.0933263799578465	0.588658844085467	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12427035523984	4.1317484586002
Merged-chr10-30797052-3	6.15822351540068	0	1.30439172351656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58979916-4	15.8148237686122	0	1.28640992033328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84621964-3	16.2112217233959	-1.0821800705488	0.448683481090474	-2.41190085250896	0.015869596387067	0.156388877320054	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7542170957441	2.89772002626637
Merged-chr15-100543883-2	6.75523076270211	0	1.31203389927381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34518126-4	8.57514639979656	0	1.31682287413886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105048936-2	4.53859772887418	0	1.32133001652359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155764120-4	9.28154249245667	2.71997584509987	0.764215410758012	3.55917429406712	0.000372022588856738	0.00876131124930962	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11957733386877	3.4314922584484
Merged-chrX-36051954-3	4.45550270603839	0	1.37263876828595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86572565-4	10.0260290139328	0	1.30635453899031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102320109-8	23.7740839512211	-1.01914199314737	0.357613636595994	-2.84984097040662	0.00437410935184952	0.0587282822490155	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29949356913803	3.85620192713506
Merged-chr16-44811773-4	7.76882311018426	0	1.2932036324079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19998140-6	19.0403575741711	-0.843128083540228	0.44444656784714	-1.89702912461281	0.0578240942979863	0.413229797243681	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06534263597506	2.96279845563572
Merged-chr5-104946822-6	25.4539910443666	-2.10777749717129	0.516398213900533	-4.08169013841182	4.47093792237448e-05	0.00167042829888784	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55423508324731	3.12380151411632
Merged-chr19-40630768-6	35.6111359026299	4.53802685123936	0.706732184021962	6.42114078548648	1.35256862471607e-10	4.53256150516391e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	4.52342550230998
Merged-chr10-58405602-3	7.98277654836322	0	1.30814347624396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44723102-4	13.2555917769759	-0.902383096016703	0.778037980430925	-1.15981882467602	0.246122578078547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02452379010878	1.20275690226768
Merged-chr2-129381092-12	44.4826854460711	0.519632857604813	0.267769391009296	1.94059842182176	0.0523070056781363	0.382898057421727	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93374836166708	5.45745576453577
Merged-chr19-8534796-4	5.87719458214917	0	1.29941765949276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55803262-6	25.0051624719029	-0.266748832257698	0.385127076632768	-0.692625495433685	0.488544606120265	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29581480040936	3.87416838001646
Merged-chr11-63948616-3	11.5254161999958	1.84833137895178	0.984208108182903	1.8779883680945	0.0603827563521637	0.425603666981824	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.667447567553467	1.50288339618282
Merged-chr2-145832774-6	39.0303180038556	0	1.27804411193713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131761605-7	33.8795171749801	-1.33424043523505	0.3372991796671	-3.955658702022	7.63240602518949e-05	0.00256161892204434	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71429273578946	4.32432278880875
Merged-chr10-117330714-6	14.883148976412	-0.269525074654541	0.402523137196189	-0.669589024203532	0.503119812754739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8904922534871	3.69807084469279
Merged-chr4-149793392-7	33.9242651204394	0.914051703927471	0.250883521360358	3.64333097276074	0.000269132410990514	0.0068457479675306	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37373583229879	6.19772469155408
Merged-chr12-102497072-2	11.4531196715082	-1.59211274492441	0.53983870952238	-2.94923783130155	0.00318558723318526	0.0464136863633721	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8654991170302	2.79115975261273
Merged-chr1-191085522-14	108.296986366721	0.151759805980229	0.185886447179174	0.816411353722571	0.414264905121089	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.86118416407734	7.02620353439046
Merged-chr8-128595148-8	34.6085788086429	1.58521085091303	0.352970937259725	4.49105204870337	7.08722275083595e-06	0.000384333326038279	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00932014035837	5.81680141800459
Merged-chr15-36724656-2	2.58148272272883	0	1.41658763600004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48968113-1	2.56601753805751	0	1.38883458650907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115343803-4	6.31227212723016	0	1.30889562965972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17748783-1	3.85149319742893	0	1.32447352761413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45412908-1	2.38770301784861	-2.40116147827162	1.16776146136498	-2.05620887288482	0.0397623873987358	0.315138019036724	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92112371862507	0.916190436775555
Merged-chr12-103336839-2	4.54035744500679	0	1.3234299272537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12054325-1	2.25397657946592	0	1.47274228283834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7062765-1	2.62071517598218	0	1.36535524519961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64752334-1	1.52068495901726	0	1.43021115014197	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139971609-3	7.7779721508897	0	1.35244344400743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68684135-2	2.80721442651847	0	1.48403967014977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83268416-4	8.81357574570877	0	1.29508826527504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9379352-1	1.78298817607697	0	1.64253156123566	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9325469-1	2.04805753601054	0	1.45083803595965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73462482-1	3.14367093545626	0	1.34378348781809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122268195-2	6.22511640698231	0	1.32059995737691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80357147-2	5.63121946037602	0.114571306254434	1.32792881885854	0.0862781985203973	0.931245268901674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr1-118525510-1	2.38349512668569	0	1.44078200147608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137566044-3	6.04407435795753	0	1.31946660507304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77373025-4	21.2571263936584	0	1.30439102851307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103550655-4	6.77705277445839	0	1.29076660617444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117545670-7	57.8560265109505	1.69730613822436	0.305220124392991	5.56092473128987	2.68348922501067e-08	4.1455150566796e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59425934732462	5.20530465194089
Merged-chr7-130812575-4	15.0214520920989	0	1.2972993611877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111546493-5	19.0667504150879	-2.9731356756466	0.485820365541314	-6.11982511752848	9.36781115811672e-10	2.40058426642469e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3154331331291	2.52467542378
Merged-chr2-19388930-4	9.49793150459855	0	1.3182489833221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36214553-2	5.21351944069668	1.41461359663921	0.87725557084966	1.61254444388321	0.106843516758522	0.652626326986577	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961036207701452	1.628416560482
Merged-chr7-66309587-6	15.124848851847	0	1.28937350521279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53491033-2	12.1200290170921	-3.42629510457592	0.780748370749827	-4.38847551008697	1.14147985460133e-05	0.000564229520263077	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2951150456267	1.03295826569721
Merged-chr19-17125594-4	11.2691626472011	1.38181075183248	0.624416381353024	2.21296364589008	0.0269001521093248	0.235348418762343	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43542760144534	3.17198420640041
Merged-chr2-34779654-3	19.8806970720777	0	1.48038239067902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94590444-4	11.1837854571165	0	1.30410510677298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108874666-5	21.6634221456069	-0.69624049609843	0.293580738818511	-2.37154691721394	0.0177137975863541	0.170550437170752	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74354531821176	4.9903521400658
Merged-chr3-145105161-2	6.87059076334505	0	1.34327193862105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47621713-2	4.24158911858198	0	1.35038116355577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75743834-1	3.9321879341887	0	1.35407076195456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99365351-4	10.4061937531551	0	1.29496824543526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136464155-21	103.331137820125	0.00755620652132315	0.21905778434353	0.0344941246619814	0.972483127402519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.92707059182313	6.9707742879424
Merged-chr2-117838591-8	45.825577127573	-0.957138723097072	0.266411361012722	-3.59270985838838	0.000327256906959207	0.00800633839092339	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3172196093319	4.44537204205401
Merged-chr11-29151768-8	25.1834827397368	0.408528037693643	0.406589310653112	1.00476826859372	0.31500844656908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06849078670383	4.35883337096404
Merged-chr11-110448651-5	13.6274490962191	0	1.29080980397077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129785408-4	8.81810164342358	0	1.2864982488212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61971446-8	32.3435467850185	0	1.28142978589232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50898188-2	7.25135437620546	4.62759526793048	0.974118318189024	4.75054742480729	2.02866708435192e-06	0.000142696748432788	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.78831328306335
Merged-chr8-85513447-4	12.7025842069004	0.243030336926201	0.617699328205123	0.393444392488471	0.693991287369576	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82819125015717	3.15611580154736
Merged-chr4-150915479-4	10.9224224215087	0	1.29354126632057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-23038603-6	26.0122049111392	-1.86181230539104	0.517050867553997	-3.60083005797607	0.000317202868518746	0.00780419376740437	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12112011855833	2.42139546294927
Merged-chr4-129497258-4	10.6170580020529	0	1.31333456155497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83058949-2	5.5610726082581	0	1.31410389183573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-143483065-4	29.13123039955	0	1.31329223736577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16870980-7	22.4842967169436	0.757018672322033	0.428646947713561	1.76606570129575	0.0773848268896121	0.512806905783246	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6956122490972	4.06258307901009
Merged-chr12-35067909-5	12.5419095703589	-1.50649812373886	0.555190933903243	-2.71347752951853	0.00665810835975022	0.0810659118457682	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61335222301768	2.61076849167644
Merged-chr1-65473329-3	5.27103482045104	0	1.3263910809872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-25849010-6	14.183134510749	-0.530799261315144	0.47868510484626	-1.10886939230253	0.267486529532002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16328593315948	3.69312120352535
Merged-chr10-60245235-4	8.24131854152744	0	1.29647316831937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-64935050-4	19.4203744561958	0.16625593690607	0.76423966379771	0.217544240088116	0.827784233802298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31620456275832	1.207189364431
Merged-chr4-88432664-8	40.2687503691363	-0.021948102636182	0.276927889296173	-0.0792556599913581	0.936829273510392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24680584407859	5.22133616423784
Merged-chr16-64907654-4	10.676931703223	0	1.30708376831074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184048864-4	7.93218110220944	0	1.29730961631674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47318944-1	2.29744185354663	0	1.38106645889571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55754476-1	4.3829315430833	2.5583904552228	0.798036830082947	3.20585511693349	0.00134661772009592	0.0238536409697446	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20193112011308	3.34800470532829
Merged-chr18-53261439-3	7.92405973197882	0	1.30063773071159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60594433-2	5.99582427696661	0	1.30467901373162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4722678-2	7.90273238955555	0	1.29766320769638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16018420-11	37.8470041351402	1.49619219957373	0.371977065341333	4.02227002409624	5.76399234522082e-05	0.00204259134376789	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68781888579574	4.63884975721527
Merged-chr19-32651219-2	5.33320273817105	0	1.35573484405417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102849984-2	6.40555565623376	-0.0617063836529783	0.696886984426254	-0.0885457542355754	0.929442920500575	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66984679305976	2.27624770054806
Merged-chr9-83563859-1	6.02861483930888	-2.63106928006723	1.03997790561288	-2.52992805507409	0.0114085917292399	0.122576499809971	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80099695716946	0.469435083901436
Merged-chr2-166188211-4	8.79362100895651	0	1.28354595271874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138253658-4	8.7418463006863	0	1.29608244855757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124146502-4	7.93244127670471	0	1.3057137093742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48275605-7	28.0632681853203	1.43599656621022	0.452107845547585	3.17622571771779	0.0014920480876179	0.025871415622628	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85002969847504	4.70921975210724
Merged-chr11-69245886-2	5.13133789225793	0	1.32130461045833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18965066-3	7.52180492220496	0	1.30850815501428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116987423-6	30.7237065066955	1.0711605164145	0.394571767133503	2.71474191931241	0.00663274366639274	0.0809229401837378	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05148287527524	3.83255535913729
Merged-chr1-125468114-4	12.1715868268292	0	1.29787277314627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118981235-4	16.7770601249453	-4.88802188342594	0.999012479537415	-4.89285367655197	9.93842972229452e-07	7.97162997163947e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78726944681819	0
Merged-chr2-117378430-4	12.9056680318638	-0.564143824719425	0.451706303691094	-1.24891731664923	0.211695317252015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36316271725716	3.864412046269
Merged-chr4-95084156-3	6.4598254314732	0	1.29743386059334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138730983-10	69.2799422016902	0.262330676823826	0.265338350236826	0.988664761764307	0.322827189056524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.10933745136402	6.33701729799373
Merged-chr6-58661172-4	7.91182534469777	0	1.30413579247372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11557861-4	11.192539595801	0	1.30179755381672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69392367-3	9.32460067197829	0	1.28564442309861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155696377-8	39.1008654683435	0.272228280025796	0.364410180924085	0.747038074884376	0.455040578065268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75947565459676	6.09038280911592
Merged-chr16-70353205-4	10.8226324966548	1.91055987722017	1.17314305298033	1.62858218557955	0.103401498001121	0.637260613824509	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.683637474991079
Merged-chr7-99053045-2	4.86108493191384	0	1.37609936159404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39258465-2	3.38284952176245	0	1.39919083096463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142078204-4	6.41514681646884	0	1.29885262482102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29292988-4	12.3630074872791	0	1.29541285839182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88727487-4	11.4166752144929	0	1.28762288534759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119339504-3	6.24620504403895	0	1.31896078170858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129914269-4	14.0591799830225	0.581528299546917	0.551680561623762	1.0541032981755	0.291835626326831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54319213934416	4.1052765490051
Merged-chr4-115835736-2	7.84235046701315	0.15287568095512	0.667093071368565	0.229166944638609	0.818739163302424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18765500244953	1.94767211644437
Merged-chr7-100446491-3	6.8643665989442	0	1.29880566727049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59578214-4	14.1238386480772	0	1.28377458802605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52094918-4	13.1665728766979	0	1.2966583302588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75187015-4	9.57093189055414	0	1.32985736051765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120741871-4	12.0007108528441	0	1.29919460683986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101335117-2	3.96361556073081	0	1.36184627664609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143465098-2	6.3327554217053	0	1.30097248231842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138683814-10	56.8565435097821	-0.150007811225129	0.249094614391657	-0.602212181871055	0.547032907848135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7892685632118	5.53703055539087
Merged-chr11-31732463-5	23.4902049509638	0.401909556727462	0.408877926880011	0.982957333486494	0.325628438174706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49540649005131	3.88997049667035
Merged-chr4-74357745-3	7.02651002470602	0	1.29683284763944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77747197-3	8.52125260203794	-1.82690408324243	0.707764456997933	-2.5812317433846	0.00984484701369476	0.10968821363289	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18017557397258	0.843323834477631
Merged-chr14-45608534-12	60.8320715074415	0.150434819745473	0.229600947358449	0.655201215309517	0.512338211979322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07626998946095	5.19017583069749
Merged-chr18-77865586-8	29.0321390029939	-0.254521550170805	0.268366601176935	-0.948409932735994	0.342920804785124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20478916135827	4.84455434917277
Merged-chr16-18687573-4	8.6733839013686	0	1.2999488635458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128222123-2	13.3777518913963	-2.12862458096829	0.625273971633788	-3.40430703585241	0.000663321479956736	0.0137082243609275	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05962742741677	2.51339913143748
Merged-chr16-94488546-3	5.91417635837607	0	1.31030322895042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97310130-4	11.7064359477444	0	1.28964853678069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60865154-4	9.54064364478302	0	1.30045305090572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45953742-1	3.51029083496798	0	1.34107288292459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40310087-1	3.84189496271006	0	1.3537459243508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99225421-4	11.9020317690675	0	1.30420910532898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99030743-4	8.03427170336606	0	1.29151057932934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91089246-3	7.61908403136794	0	1.30240576784593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62663997-3	8.34092211110935	0	1.28933724762996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16060021-8	36.674551412118	1.12321412539223	0.372051781362317	3.0189725776327	0.00253633487929457	0.0389242224101416	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89650601150879	4.97486966832473
Merged-chr8-33471264-2	6.84067041360039	-2.44622107042139	1.1461047142967	-2.13437833376552	0.0328118236757525	0.274500247076651	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26353188638628	0
Merged-chr8-36184285-3	10.8264549245262	0	1.31836225844726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85458244-1	2.57619356526795	0	1.45431157827045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25398921-4	11.3266147695727	-0.934900369866627	0.652105201937515	-1.43366494714178	0.151667899793007	0.835797822556403	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02990681324722	1.54028618764495
Merged-chr9-40744393-6	25.9969139497595	-0.581449842157179	0.359178570501685	-1.61883221859543	0.10548336791881	0.646251280707159	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44858217743204	3.76575881716268
Merged-chr3-65873257-7	48.4550746386476	-0.156297631607807	0.312286106969379	-0.500494988792867	0.616726583810886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04808437868989	4.02648175337096
Merged-chr7-19221506-6	43.6686503749762	-1.97527312474525	0.338966727225229	-5.82733633154727	5.6319038046941e-09	1.10186343120222e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.51326061281375	4.53897306013436
Merged-chr16-33912179-2	4.06543284902807	0	1.32707501188067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-10868262-2	6.09312262021625	0	1.30747745812997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68822921-5	15.1969891053248	-0.337577113497696	0.526173044812725	-0.641570519101461	0.521152079780025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34208972576715	3.04789201217784
Merged-chr14-93655001-4	13.652691713617	0.261070212332238	0.444429206900764	0.587428117411132	0.556916214452258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17675332366802	4.58600411541992
Merged-chr11-117958332-4	8.51466592177168	0	1.30168103471216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108061541-2	6.05232217926842	0	1.31537215935625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-59180577-4	5.99863225228953	0	1.29836944257879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35292133-8	55.6186258501368	-1.69043651029798	0.267154684361056	-6.32755706433124	2.4907287456146e-10	7.75043621956818e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32087511671716	4.54692017480837
Merged-chr1-144307236-3	8.29079722427106	0	1.29647126166014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74463308-3	8.8807754437068	0	1.3056759920317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35079992-6	19.0073506522015	-1.26534286969011	0.424234558249346	-2.98264920922919	0.00285765317354928	0.0428294046510897	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30596326358633	2.59675026298572
Merged-chr3-79181787-5	16.6776798565802	0.703996005543825	0.546465737191034	1.28827108020081	0.197651616435909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70290198221613	2.86881063209913
Merged-chr7-98803397-3	7.17093160394032	2.29691410032591	1.12541504979962	2.040948448961	0.0412559513922271	0.323082555753976	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.03956264035389
Merged-chr2-26485905-4	7.43787938674676	0	1.29746775782093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156200009-5	20.9026631962173	-0.605593625280312	0.394590171315638	-1.53474077486813	0.124847515774285	0.729982620417539	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46564880099255	3.90951769190909
Merged-chr15-36518003-4	6.24661482406385	0	1.31066843704958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90040555-6	16.2063046970611	-1.57518211620261	0.490402827770722	-3.21201678906112	0.0013180667233258	0.0234938800392415	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27090904174875	2.16263994285839
Merged-chr7-74695440-1	2.41734679977583	2.51837698866765	1.39098047194653	1.81050492042024	0.0702175220103326	0.476819515045952	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr1-173459013-2	11.0166206229468	-2.16739483499815	0.570196238628497	-3.80113842948425	0.000144032801750239	0.00422784146634411	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48286652480542	2.84686254141174
Merged-chrX-13502473-2	5.37554104393644	0	1.29480155881989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93613795-2	5.78693366272493	1.95950688680788	1.22592908447193	1.59838518526701	0.109957279622214	0.666351515737107	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.73596151290311
Merged-chr2-119015984-6	58.3544963112156	0.0228008770305485	0.386615613791919	0.0589755721630535	0.952971564827496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24488851012181	2.92824195146549
Merged-chr8-106004819-2	8.45004667153051	0	1.31515139099373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102246479-2	3.22520935667845	2.45052949890335	1.30546745744897	1.87712798578064	0.0605005545782972	0.426341986355377	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr5-123827749-1	2.77392517781121	0	1.35879023534723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79384835-1	2.07916579057702	0	1.41870255740061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107749717-3	7.13776036526106	0	1.33041435050486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71878140-1	1.74997582657653	0	1.40284926266513	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16209055-4	30.622032553651	-2.17632001289937	0.552716505668385	-3.93749777793882	8.2335694140678e-05	0.00271732740874583	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54425086451868	2.86829562625364
Merged-chr1-178350978-2	2.74219447034153	0	1.50398999656402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-62400350-2	2.53921756689116	0	1.35637364707839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-125023758-1	3.02677718484361	0.764353549559585	1.32868424361944	0.57527102713089	0.565108012942488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.855026762206016	0.95685815637649
Merged-chr4-149790042-3	9.42188287263191	0	1.29371633720607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75883993-1	8.96668135373113	-3.50249512269971	0.780836577711482	-4.48556743200352	7.27201426664684e-06	0.000391108678410127	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25955900325559	1.2679693671925
Merged-chr19-50653872-1	2.41620495138447	5.05662966821604	1.95506142212265	2.58643007886982	0.00969758436709202	0.108454278290603	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.12622051207479
Merged-chr3-10419482-1	1.73971176090376	0	1.44439555634831	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33281336-1	3.18343346570058	0	1.32290968521613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87700676-1	2.06545304697669	0	1.38139870886976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130248063-2	9.24626922624346	0	1.3053202020469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25024292-2	2.70382360389551	0	1.34664393565052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17939041-4	6.7382261977721	0	1.30020196928943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161353457-3	12.1876788623091	-1.49822244878968	0.614175414378773	-2.43940479171591	0.0147114787016077	0.147512089494439	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12261600622503	1.80018199085412
Merged-chr10-117952303-4	7.36248219736769	0	1.29800547598598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103893240-4	6.93386225577463	0	1.29546839403471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46894597-3	8.25440565338356	0	1.30218006672355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88107820-3	5.28491673812652	0	1.30562358138206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77801121-4	7.86662485664205	0	1.30913671750074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44449839-4	7.7395257415317	0	1.29592398352513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134543427-4	9.04202359030729	0.109056038390338	0.770782485512775	0.141487437039759	0.887484883994667	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43650989087801	0.887107926668329
Merged-chr4-59928573-8	29.6556690179822	-0.655022602069767	0.349513533595847	-1.87409796505102	0.0609169237645848	0.428536688590866	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79815043747346	4.23639157735085
Merged-chr11-94161408-7	29.4217187556372	0.746847576599924	0.365398499768358	2.04392622595162	0.0409608358331761	0.321667083995337	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71346569742034	4.10223162064375
Merged-chrX-166946137-4	9.69948982945627	0	1.30978828332212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78232421-4	9.57229352752231	0	1.29670599932245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128389284-3	5.39527139551116	0	1.30883266915387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45100890-4	8.20693396977318	0	1.30833284832948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112972459-4	8.31152193591844	0	1.29574276480984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105586905-2	5.40248676163492	0	1.32912868983627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100606177-3	6.35457008555811	0	1.30747595100192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97279688-8	47.6427659106495	-1.17547332106143	0.249404409432575	-4.71312164743109	2.43950462018251e-06	0.000163331832900047	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27070166169857	5.11553078403371
Merged-chr7-128312532-4	7.56869151620468	0	1.30190706944935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117190166-8	37.6845123992774	0.838757676663624	0.444021802464237	1.88900110762282	0.0588916802898937	0.418342835115055	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22436001803923	4.21838166633376
Merged-chr16-57422314-10	55.8753553680073	-0.49623145391049	0.274036406727793	-1.81082309404023	0.0701682402622006	0.476534382474929	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24277802805895	4.83195672796075
Merged-chr11-114906851-4	8.68205112610141	0	1.31471837745657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92879365-2	5.09599541497809	0	1.30292060610644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-169368973-4	9.72837623371928	0	1.32621070608972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64049892-3	8.67162531088368	0	1.28895032237397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50185775-3	4.177233692303	0	1.32764899086183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55121243-4	8.23334097421063	0	1.28979239635467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120451680-4	26.1347713806517	-4.26544433066306	0.811302938622375	-5.25752358041	1.46008177788336e-07	1.70680686686164e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86276908316548	0.890396206374751
Merged-chr2-130930179-5	17.8567913884393	-0.730400103325837	0.383272889347099	-1.9056920633496	0.0566901696198842	0.406817024377438	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21611585554388	4.43449173308115
Merged-chr14-106681391-5	30.3038409990396	-0.721529326395831	0.719496984848173	-1.00282466999926	0.315945463594336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03278855126069	0.845523456341755
Merged-chr10-117363269-3	6.11340976914806	0	1.30134485168869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3526503-2	4.58583744682338	0	1.33808217882511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64266372-5	23.9697903559492	1.20138176205378	0.423002130238881	2.84013170660708	0.0045094911089348	0.060101408526301	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79452295034726	4.2282424117323
Merged-chr6-127561746-3	10.1645102903451	0	1.28761392486806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32863421-3	6.5933107603537	0	1.32973060472572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23971223-4	11.7717645607724	0	1.29473842086083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113840618-3	6.39622687812041	0	1.29941705019134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19209897-4	8.26983861696497	0	1.32554075151299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31512663-4	8.3628362851015	0	1.29045052300889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144931991-4	5.68387009412817	0	1.31335208248536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13644315-8	27.4412941771776	-1.459195123275	0.393943903565101	-3.70406829518015	0.00021216909632682	0.00572436076324211	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7530045751334	2.80405808141914
Merged-chr18-5807283-4	7.33736831420177	0	1.31655272460975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76409579-3	11.8455576314833	0	1.3305041221385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34348325-3	8.9839814785034	0	1.35811427989689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75738176-4	11.9810330130581	1.39951052311886	0.587442033043349	2.38238063399795	0.017201107538981	0.166596053541167	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53467039272308	3.2180769473006
Merged-chr17-64591903-3	7.32734660519383	0	1.31188283042562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31565847-3	4.82006209292309	0	1.32640601135526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80439961-1	3.72041748084856	0	1.38714461806745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82976829-3	13.9194355852169	0	1.32371660942372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77984830-4	6.80336022165777	0	1.30336993531784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135959840-3	18.6234205708223	-4.56598263877532	1.0032743174542	-4.551080954969	5.33710064040927e-06	0.000305125265483976	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0194547328927	0.306240821987646
Merged-chr2-124264526-1	3.17325486409802	0	1.38290534738374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95311188-3	10.2837862885838	0	1.29199806717908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37194873-2	8.34870309238616	0	1.30249688201416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142391272-5	12.9741856934317	-1.70800432559939	0.550127925245413	-3.10474027443243	0.00190446175175149	0.0312921693814314	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3940771230755	2.8961882943025
Merged-chr7-79496193-4	7.75555036124654	0	1.29410089085364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97798295-2	9.26982085904345	1.80055579927672	0.551961029667996	3.26210674757193	0.001105874915542	0.0205238574924758	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63708367826074	3.74264136244867
Merged-chr17-28514037-4	15.2292057555107	2.45849129635201	0.765168764401879	3.21300530122106	0.00131353865077629	0.0234392399436448	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.873092966476886	2.94971837427636
Merged-chr6-82994608-8	59.9674464452304	0.760606117833239	0.293955994136464	2.58748293283702	0.0096679985010541	0.108216003776958	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4002051680304	5.18559934778227
Merged-chr9-107278709-5	41.8844033531271	-4.43360823705009	0.783759810841105	-5.65684559953653	1.54180345994966e-08	2.57674396148006e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89398528564349	0.793480537552656
Merged-chr12-16532575-4	13.7590059863088	-1.55085831850369	0.49373404134282	-3.14108039681806	0.00168325818221249	0.028356326160056	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57286218288927	2.89947373244046
Merged-chr6-29268666-2	5.13829461943743	0	1.31821067507461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25704902-2	7.50870890090457	0	1.29738227586868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66079521-3	7.48375705854992	0	1.30483660449893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34769184-5	13.2794413214003	0	1.28227711213954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43578527-2	4.66214266697954	0	1.35901661504304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28420910-2	4.20841667263081	0	1.35580544179381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112332606-2	10.4658017188419	-4.76004676630939	0.971025965426499	-4.90207979579482	9.48272998929012e-07	7.67854366642073e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73071968618683	0.469435083901436
Merged-chr3-107110996-3	4.86798671363065	0	1.34436541736189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36531297-3	10.0131964915637	0	1.31296249200414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5882170-3	5.99179918236023	0	1.32739069082183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58980360-4	11.5557276372104	0	1.28599310691597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12840399-1	2.83153921113775	0	1.33713707149051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41417819-1	2.79455228716997	0	1.39902647404309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84762793-4	9.81370654113215	0	1.29928210078406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155592654-2	4.06295772119179	-5.07016695879866	1.24571116569747	-4.07009834896991	4.69932950435206e-05	0.00172809446140343	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8477101719342	0
Merged-chrX-48453353-1	4.90354068590294	0	1.31467252912411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86007970-4	8.7589940586355	0	1.30090896566434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21006833-4	10.7947644461939	0	1.28870096148115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100446135-6	19.274010849255	-1.38784070842312	0.533156439239059	-2.60306470349285	0.00923945145084796	0.104366671479189	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68615284850035	1.95160684218358
Merged-chr8-83100262-5	15.3892411282967	1.55854534351343	0.38360933901772	4.06284515258226	4.84781899277742e-05	0.00177371545297891	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51622333103336	5.34774996258801
Merged-chr17-14826898-4	14.5063128020106	0	1.28592480864265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58271531-4	6.96231023933743	0	1.36880538540232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46641619-2	9.95838640624418	1.56916137295966	0.638018595232102	2.45942890173729	0.0139158257856049	0.141730603457939	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6358329530867	2.92523029995512
Merged-chr5-123886595-7	29.9874831798003	1.69644863138656	0.422072889119817	4.01932622330779	5.83648116533212e-05	0.00206380247959845	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64044205432273	5.29437849435346
Merged-chr5-66112319-5	68.0800279740386	1.29325937993012	0.467618940033745	2.76562660151617	0.00568135472258534	0.0716983016033336	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59476998313283	2.90762449428888
Merged-chr2-157138329-7	17.4907151045178	0	1.28169556227414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28402349-4	6.74067710164853	0	1.30190274706133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76675584-4	11.7378556074141	0	1.30652828718324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70490403-3	7.60036165765272	0	1.29687140599029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-5099985-6	18.682931876167	-0.566331090415354	0.363243049069217	-1.55909684126519	0.118973461170825	0.705997075342241	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92241139986295	4.16726546389045
Merged-chr3-32715347-4	6.88391260969015	0	1.30058929837659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8610703-2	5.63182262333312	0	1.31494809173586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52483676-4	9.97124249173433	0	1.30546568897046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118220862-2	5.60881280395873	0	1.30073812117956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95417320-3	6.4586581464343	0	1.33453718277801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174196554-1	3.48363558545127	-2.67832492097165	1.33531893331331	-2.00575671785463	0.0448822105839459	0.343106332805163	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17752579060383	0.420961122473315
Merged-chr10-68446066-1	3.90894458750678	0	1.36156078110766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37258728-3	5.90994919698761	0	1.36214910471192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100474104-3	7.91488502405081	0	1.36728718073763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57534522-4	8.58733631945841	0	1.29159312355702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66143462-4	9.68926432854577	0	1.28806419427614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97155290-8	23.5076095899399	0.780603142896656	0.348878664105181	2.23746311600562	0.025256087390866	0.224328433688124	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10447118693533	4.91899261393929
Merged-chr5-75874669-4	17.1054975074995	-0.771375143955724	0.432020763690271	-1.78550479233157	0.0741794747035149	0.497319678745924	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46841638716392	4.56952834697096
Merged-chr16-90885570-2	6.35952852717893	0	1.3073252546427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65155019-3	5.2958654378531	0	1.36418362508539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30622525-3	8.56676905964581	0	1.31786297103923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60657257-6	24.2811342075588	0.573089293554403	0.456150435619328	1.25636028994756	0.208985372139241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7171178990252	3.54063457163008
Merged-chr2-160569824-4	9.78826195363784	0	1.28841936028364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122604199-4	8.63106707948081	0.906860605534825	1.03915783630618	0.872688030490514	0.382833143578951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.879653220210627	1.03956264035389
Merged-chr15-73135157-2	4.79413895423924	0	1.31460621245501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30761460-7	26.8851520086633	0.00388672827629144	0.346864751749464	0.0112053134735892	0.991059640471367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94160542235788	4.73925832459533
Merged-chr7-36720209-8	28.7565373638208	-0.0789735679031891	0.352237775057822	-0.224205276933245	0.822597577591145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65989335218325	4.46007254757092
Merged-chr4-42933887-3	4.01171846804321	0	1.31368416413574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108886840-7	25.103924402398	-0.051268716247773	0.339566129347627	-0.150983009837495	0.879989118433953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37236612261285	4.26509345455037
Merged-chr13-64378871-4	13.8204618928488	1.13256416423294	0.522111421839455	2.16920013019978	0.0300674932700836	0.257070576374053	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96871948386985	5.14060570286371
Merged-chr3-126746601-7	23.5815525601627	-1.99977823976926	0.523378868499095	-3.82089984928905	0.000132965642837497	0.00397786275663374	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10438331870294	2.84926914477052
Merged-chr2-90589593-4	8.98524980327867	0	1.28920078659662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32814608-8	26.2542255422138	0.286216014174711	0.322792442495221	0.886687470010853	0.375247186190089	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70156707944424	5.02939246954754
Merged-chr4-59177676-8	47.0361393828961	-0.38980433117549	0.310796059200984	-1.25421259258443	0.209764743998417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55745843814289	4.21223939906566
Merged-chr13-5871563-4	13.7646121774696	0	1.31099641222286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117312650-4	11.8606295890998	0	1.29071235803393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79864965-4	9.23921775326058	0	1.31750369556758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67173304-4	11.2649188957743	0.901061046567589	0.516988292999713	1.7429041600524	0.0813503572657752	0.531645209109846	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4712614357119	3.30717866661995
Merged-chr4-9658721-4	7.5173990606932	0.36499668260319	0.829769483552419	0.439877206667763	0.660026045221419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15053321103858	1.11779166918352
Merged-chr14-9467993-6	21.5005142566771	-1.50954101939018	0.352449774247252	-4.28299613076558	1.84393379304585e-05	0.00082473441232289	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31002941709183	3.69062047736421
Merged-chr17-34293039-7	35.6098094874938	-0.306931896722666	0.388299420065157	-0.790451597046326	0.429264079287402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23020796957397	5.765800865367
Merged-chr11-101463041-5	25.8253636033262	1.02167746329126	0.484066936015522	2.11061195730688	0.0348056790527354	0.2858378664547	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76300808498347	3.56895856700354
Merged-chr11-71850612-2	5.20032162184913	0	1.34525574304743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49762880-4	11.3187776722143	0	1.2862613823094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40642885-11	58.1103371717331	-1.61588621080044	0.261352235551351	-6.18279085079015	6.29781303392855e-10	1.72914659880292e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.29355054159361	4.69090060036634
Merged-chr12-98832614-3	8.52998183798395	0	1.32526804406435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73962947-3	6.67768838794606	0	1.29355501087545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62217867-3	12.9281452983704	0	1.30814984093197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150473729-3	9.42056956856602	0	1.29190102551991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108445442-4	9.59492387033793	0	1.30366625833527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54398068-9	33.1690485216288	0.727944719924054	0.321176611479303	2.26649355496723	0.0234211813209114	0.212007274497337	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4363743408388	5.07048342204593
Merged-chr2-153092882-5	15.0308571152938	-1.98691863224579	0.773944890287744	-2.56726112825304	0.0102505387223805	0.112994551847617	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94146927719932	1.03295826569721
Merged-chr10-118611230-8	25.8602624138495	-0.104389101438501	0.420058588548279	-0.248510813216007	0.803739204709921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38279110420827	3.95668910425934
Merged-chr13-69493214-8	23.3501509866968	-0.0382016359650448	0.337204941673992	-0.113289075110821	0.909801378277859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89549698034805	4.81859871422171
Merged-chr19-16200452-1	2.12660449718591	0	1.37231099455289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67792160-1	2.89316919646328	-2.50804181408957	1.2396759089298	-2.02314314251273	0.0430583916609908	0.33312417925963	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86350854635927	0.306240821987646
Merged-chr10-122854350-1	1.67553722718717	0	1.6271763201617	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126227208-4	7.36285644988	0	1.29683930941498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58687825-2	4.99090821383741	0	1.30949810113438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32396326-1	2.63281801428624	0	1.36852600728315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70430359-1	2.80542137225744	3.50490876853939	1.31577583241228	2.66375828024874	0.00772730662324892	0.0904601538163425	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr15-58732177-4	10.9278736783722	0	1.28532633790303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138290315-1	2.44655753743662	0	1.35528120621637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116164179-3	9.52874068525101	0	1.32027694607623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145089422-6	24.4187593472125	-1.95218897780833	0.398786859188361	-4.89531922336046	9.81462783140544e-07	7.90809704403231e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23287612114693	3.38291866868993
Merged-chr2-33978673-4	13.4760490476893	0	1.29935724951305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66495876-5	8.8824927010344	0	1.29580201132014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115513377-7	48.5239460179932	0.941856224287628	0.224639833283495	4.19273915280648	2.75606286259631e-05	0.00113411639684646	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04359875207455	6.97816459352982
Merged-chr10-58529986-4	17.6795124725271	0	1.28950902257404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166289418-8	41.7163332092143	-0.36069437299564	0.253326895747243	-1.42382975929852	0.154495758814317	0.847308422616898	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38859455815671	6.04152414140866
Merged-chr19-56689395-2	3.1642063497095	0	1.35554543928021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70971633-7	30.2933284479624	-0.996060964756373	0.318710814578228	-3.12528134972304	0.00177635072270699	0.0295752984077929	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85567277801643	4.85858467103852
Merged-chr7-142340738-8	35.8607748585528	1.01173324958165	0.302552789562374	3.3439891631641	0.000825829632294193	0.0163430233652018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96911592680269	4.85446675981166
Merged-chr7-90040654-8	30.9253998284688	1.54730074840672	0.3677935433407	4.20698181472261	2.5880395859427e-05	0.00108093607440897	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90974134129645	5.34697941904713
Merged-chr5-64392662-7	22.9989147661814	0.707621808738926	0.437131937965614	1.61878313452034	0.105493932152829	0.646255412998852	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97869901677808	4.49119246409297
Merged-chr6-142339181-4	10.7353974091145	0	1.29426728958997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-26991209-4	10.1223825834523	0	1.30572050698433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102973059-7	16.7370645561941	0	1.28530561009345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50522777-4	8.0854832325416	0	1.30468197388454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12264914-4	8.27729997969274	0	1.31645279522189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107657844-1	5.00373074017929	-0.486176307667168	0.965355956346536	-0.503623875183968	0.614525711776061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15039691318703	1.9272926343824
Merged-chr10-99203399-4	7.96446163082759	0	1.2970185238872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-16912407-4	11.1672010447593	0	1.29062714507473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107277671-4	11.8901934044724	0	1.30140642357928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19818604-4	8.57090183320694	0	1.29970037942895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56622414-5	17.3111601148054	0.517699482863559	0.556532668113748	0.930222990535657	0.352255640638755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52317577513197	2.79590200375307
Merged-chr2-27691311-2	7.69942919472592	0	1.3135685142734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108901427-5	24.052896777984	0.803313930338453	0.410592409629656	1.95647535487327	0.0504091828981659	0.372924087587858	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10250634785234	3.87022410157085
Merged-chr15-59721774-8	35.5016388020165	0.586914404536898	0.262258026188097	2.23792733083391	0.0252257944059746	0.224150769819529	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63628838313838	5.21526378331516
Merged-chr3-152782234-3	15.8389311369255	0	1.28811765675791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119835743-3	14.9156140723044	0	1.29808446626487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33885997-4	12.0760257149631	0	1.29848665751659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32271481-4	11.1324329445871	-0.99296491149626	0.579559100082801	-1.71331087951927	0.0866553619296254	0.556466804052866	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04413522328613	2.7836076971318
Merged-chr5-129002708-12	74.513652566228	1.258806915174	0.292198439340095	4.30805488905727	1.64696518666852e-05	0.000755246225179235	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23415396218405	6.47764156455688
Merged-chr16-57215701-4	9.23376408440329	0.0100819394861745	0.74490587143157	0.0135345147257316	0.98920134935175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3261393677167	1.64536602019594
Merged-chrX-85803167-4	8.70542107118944	3.92928915125806	1.01733323872561	3.8623422509818	0.00011230508228302	0.00346818899190274	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.96617270997603
Merged-chr17-23706912-8	36.7665023187192	-0.699680412793924	0.33629450664498	-2.08055855498277	0.0374743307561284	0.301242172172465	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97328511005056	5.216385676588
Merged-chr3-30860921-3	5.13865066988473	0	1.34363285339853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167102227-4	7.48061354588006	0	1.29679584496395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85973741-4	14.4805557031723	0	1.30746242409518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34806918-3	10.4384228452532	-1.92179020874773	0.852284688703824	-2.25486886508595	0.0241415611253068	0.216995110494401	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47735383696318	0.958904680953568
Merged-chr16-4370273-4	12.805870806011	0	1.29906213450926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101811946-2	4.29730084130594	0	1.31663118960035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41364675-4	10.4817943412515	0	1.30545510822969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113592904-4	8.62290963925269	0	1.29326700738237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31177364-2	8.06131160303384	0.484184749428382	0.759254964685157	0.637710350210434	0.523662246753821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90625631986766	1.83149254898828
Merged-chr15-103361512-3	10.9677997544458	0	1.29851151837996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52624855-3	9.12903182994832	0	1.29431670617683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76408389-4	8.81890757313795	0	1.30463380734495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102665376-4	8.6021169217054	0	1.29040372100533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30182924-4	9.01450416556351	0	1.31743617022024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5741088-2	4.928847326778	0	1.31459266491242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28487087-4	7.16316756985241	0	1.31334354320852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113478657-5	17.7898813015072	1.01425045906708	0.535391772905861	1.8944080025029	0.0581708750511624	0.414762473982427	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3195966981094	5.18441582918233
Merged-chr10-127591261-8	89.1213533596861	0.478178565953582	0.27917786608164	1.71280973189238	0.0867475491565388	0.556782766642097	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76158429522732	5.13697814005469
Merged-chr14-31458683-4	7.92297649267271	0	1.29975514119311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61584941-5	42.2571868455049	0.972271406650628	0.373719888300723	2.60160466993468	0.00927887451181004	0.104730770299324	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96425756040845	4.07109076830365
Merged-chr3-103728075-6	27.1988033477329	-0.225987147986387	0.442342355960254	-0.510887426766549	0.609429885767729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52329881820944	3.26960627709772
Merged-chr10-122753666-2	6.36168187405181	0	1.33291443587499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21507709-2	9.74453866840636	-0.062830751946168	1.32831228784616	-0.0473011900296784	0.962273179639543	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10220082136145	0.825079211029734
Merged-chr18-25461322-4	7.81328110158245	0	1.30803335401689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97186020-2	3.70067115237753	0	1.35100363804138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37504055-2	2.23779272980031	0	1.48209862909556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8003986-1	2.62788832649778	0	1.41402054721853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18694058-4	13.0572128451189	0	1.29701792562086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120457949-2	3.63183457384352	0	1.35791905849366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81247713-2	3.01993108588992	0	1.45951868467276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143037524-3	7.58262093159365	-1.49470662305162	1.1193329970488	-1.33535473982498	0.181760270586164	0.950945287567931	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19883896537883	0.420961122473315
Merged-chr5-105685071-3	6.66032904059333	0	1.30774229209244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58636744-7	26.4172323955551	0.209737425970103	0.320362828750309	0.654687145784859	0.512669202990862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27448214963475	5.39109641589301
Merged-chr12-32008910-3	12.6763151366103	0.990921468951224	0.749820118625969	1.32154558718306	0.186319512727406	0.968517610268479	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73293953331923	2.68388394484514
Merged-chr2-12053910-4	9.06712011879555	0	1.30382029043167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99158667-4	14.910013548711	-3.16302351415688	0.633508645716381	-4.99286558367342	5.94899619701287e-07	5.325248020411e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68601158956253	1.61477032079243
Merged-chr12-98375547-7	38.3594781675418	0	1.2756574191431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53117788-4	6.81988194540231	0	1.29744578966768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55907218-4	11.6153092966636	0	1.29776285576955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102517843-4	9.65065153928395	-1.83034446297722	0.885420525294835	-2.06720356111886	0.0387149767960091	0.30859586163845	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2639241249007	0.581381506691384
Merged-chrX-106628721-4	6.3541359199059	0	1.29939872739803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121643608-5	15.5785965715678	0	1.30088037755139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97765456-5	20.5830103423056	0.0306779942771843	0.513587286655057	0.0597327758578041	0.952368466972767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41871131289136	2.67448605245977
Merged-chr5-24876755-3	8.78404805334916	0	1.29440922388974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31146000-5	17.143425083872	0	1.28048898737718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141535451-6	20.3536624865361	-2.15153703018304	0.410144596161373	-5.24580123770913	1.55604587197135e-07	1.79332228482963e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40916162686017	3.28147298570228
Merged-chr12-91008946-3	6.56789705796979	0	1.31267723601763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70307237-5	17.310296734706	-0.23500164720732	0.516492334286529	-0.454995421242691	0.649112532908979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75313876091367	2.96507172361198
Merged-chr2-165914515-8	26.5717315288892	-0.309521899452896	0.317794331521655	-0.973969227112549	0.330071818840065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07143236890578	4.85549126027412
Merged-chr1-45860612-4	8.04952367111996	0	1.29324114380239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112950415-4	8.17166259422743	0	1.29035671218106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24490668-2	4.39773445281454	0	1.34214319394176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34046572-4	6.57970290502536	0	1.30216881059809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107124618-4	9.09373989955282	0	1.28921594424563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27745013-1	3.55547595418553	0	1.35952227553325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107248830-1	1.8903032778073	0	1.52284173217599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73463929-6	15.4450111900494	0	1.30389978615112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36754483-1	2.24200643701035	0	1.36065834849688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27412892-6	19.79566968161	-0.226521191133457	0.44130271301218	-0.513301152370674	0.607740678012347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85168129258748	3.58018435977799
Merged-chr1-91955098-8	42.3672735401307	-1.31952383869592	0.304645129978346	-4.33134722616348	1.48199758643611e-05	0.000693715002029041	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61228612506797	4.17755023208366
Merged-chr9-40974220-4	7.6739444025331	0	1.32503670398219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35125472-4	53.395195739076	-1.86137726140812	0.384399126965991	-4.84230356114415	1.28342492395705e-06	9.87829035110686e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52565878592573	3.75144977038765
Merged-chr16-45288633-2	11.1581395131893	-2.99840140045184	0.738450693643087	-4.06039485948543	4.89897945958354e-05	0.0017894282379315	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43676035885431	1.51348424539579
Merged-chr12-40218578-2	7.54680497831503	0	1.32825819712599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7114104-4	9.16984483287495	0	1.29635737750864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45718809-4	10.9667787268155	-2.70861072789939	0.766033537421711	-3.53589052643301	0.000406403068334976	0.00940730248084214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79481695537138	0.989878296978726
Merged-chr4-32239438-4	17.5658985741428	0	1.29557492102768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117842026-1	4.32982669388542	2.45859917555911	1.22748498145599	2.00295662488907	0.0451819443690405	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr10-118407038-4	13.6474317937699	0	1.29588827134991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26229942-8	24.218348803429	0.289111431161479	0.36777794664126	0.786103228325123	0.431807013147616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79380218487159	4.87669520013086
Merged-chr15-99396254-6	27.8398720076617	-0.253860477897594	0.351657389407039	-0.721897180450697	0.47035769490311	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87799621303486	5.52086090968474
Merged-chr6-82769932-4	7.28811991309603	0	1.30250608054207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67278627-3	6.55827861110542	0	1.3002440143268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110854983-3	8.05659689548808	0	1.29950358424582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23438087-4	10.4686350264049	0	1.29622649673406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74671621-5	33.7418912277746	-0.560618553834976	0.284179702067065	-1.97276072061851	0.0485228302881603	0.363079453568089	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56448562294117	5.96732845744514
Merged-chr12-104342591-2	10.1918982313928	-0.905920320225726	0.591354337681362	-1.53194161689545	0.125536842529273	0.732767352560776	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54774845097597	3.21600432583864
Merged-chr8-80943926-6	14.8587008580057	-0.0787110128763356	0.525521065696454	-0.149777084144139	0.880940489593768	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74022305079468	3.57732336166398
Merged-chr19-26845469-8	23.9410427935008	-0.175304265691352	0.2736987959234	-0.640500682876276	0.521847145327173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02367640905678	4.75714127724619
Merged-chr9-107744213-8	60.1020188145199	0.529862108073868	0.33269591015734	1.59263186560749	0.111242800607287	0.672271529500025	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40326517298262	4.95644294787192
Merged-chr8-126665798-9	28.63169125249	-0.610968705050291	0.322325034770444	-1.89550496903045	0.0580255340544626	0.414109653630639	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93243185594873	4.27616221552065
Merged-chr1-12983332-4	7.70996256546117	0	1.30291578534581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173784588-7	35.8051479539386	-2.57771916701996	0.714148942232459	-3.60949798365856	0.000306790158418371	0.00761061738481121	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67407490874198	1.00443616959195
Merged-chr4-129895043-3	12.18296668118	-5.29644469316191	1.00776760266039	-5.25562111659462	1.47525726866791e-07	1.72146716925666e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81878269643809	0.420961122473315
Merged-chr17-33815584-3	18.3297820889484	-0.293554406652241	0.45787967608136	-0.641116917799338	0.521446723348322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29489510151988	5.11777048856905
Merged-chr12-52396552-3	12.0965448562834	0	1.32834898792397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79753229-8	24.0834585052871	0.362899147906786	0.299026149199036	1.21360338846231	0.224899212499143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83863119258849	5.07378073083163
Merged-chr2-80168318-4	9.62710218013995	0	1.31720828638462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35889482-7	44.3437812549242	-0.138149585434267	0.346527939701469	-0.398667956047879	0.690137881936541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2987782960593	3.96225629388565
Merged-chr13-48549777-4	7.20226277795942	0	1.29471595332173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-162976030-8	30.7874679557178	-1.08895317621724	0.37383558384118	-2.91292007311929	0.00358066237232682	0.0504706564672278	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15128723099038	4.27387373036222
Merged-chr5-3362212-4	7.67401410851029	0	1.30690245243774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64281198-8	19.199078033752	0.651291484858275	0.47219164000433	1.37929482371247	0.167803871854057	0.897251600538025	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66223460474089	4.0089861303396
Merged-chr3-152884176-3	8.4119877831842	-2.62181864401314	0.667986385903206	-3.92495820175751	8.67447986467057e-05	0.00282714494382425	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16064350268491	1.84532766974248
Merged-chr6-81618202-4	8.10715970274072	0	1.30285606144856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25527151-1	1.83675046942725	0	1.37707909692464	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63174335-2	2.968761373679	0	1.36476239529896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11718996-3	4.46752330377451	0	1.31838028586696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8351473-4	7.88933848793144	0	1.29660215090555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75033707-2	3.72037614554471	0	1.41556689706425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128532136-2	3.63563370891178	0	1.42343055395966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117635842-1	2.0083889881904	0	1.38571520875923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74990977-2	5.08155832783373	0	1.36929110577747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4123386-2	6.12706536713504	0	1.30868973420154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132206087-2	2.30183047955026	0	1.51756991530668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84163939-4	6.58719116555235	0	1.29194009093249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135471966-1	2.30947937055121	0	1.39498426928505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7940974-1	2.10480403984213	0	1.37105230840812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6475477-2	5.43348478476147	0	1.30874421383549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37544086-1	3.40762017444122	0	1.3309980514235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127003377-1	3.6111817174967	-0.864691802155438	0.939532917417077	-0.920342210608875	0.35739395749164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9879884646788	1.15307255889252
Merged-chr6-124689225-2	3.222333536471	0	1.46252809447261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137609432-1	4.96876976399058	-0.596016563618846	0.740963009342173	-0.804380996222726	0.421176972945866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79165418036861	2.04585323093051
Merged-chr7-59322943-2	3.6908719956465	2.84231350680875	1.19022669153059	2.38804382983012	0.016938321577923	0.164612070468613	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29835464915396
Merged-chr3-84946527-2	3.815420850031	0	1.41447857162151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83711113-1	3.53626093420324	0.254651449632417	0.821501860345378	0.309982803356471	0.756574033624984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41541591132743	2.24201743577533
Merged-chr5-62846469-3	7.62548176849241	1.37640949557748	0.860486178553052	1.59957188143565	0.10969359046893	0.66537058969486	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23351192776723	1.80892243728474
Merged-chr4-13192337-4	8.79697686801538	1.92480044330214	1.25948759847875	1.52824088591819	0.126452740922791	0.736403244660967	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr17-80497357-4	7.96532233106505	0	1.30791879161154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146059569-4	7.49715532146502	0	1.32621531672308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120544941-4	8.14968073509658	0	1.31783894711595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155184264-5	18.9984216478162	0.328587215606213	0.337733689923533	0.972918087267541	0.33059401473185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11837463109776	4.4484770988474
Merged-chr14-75829797-5	9.98007805998308	0	1.28940241189834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44491116-8	28.8127398012518	0.46601126737456	0.319491386470488	1.45860354021659	0.14467425865919	0.806989680439047	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36797685719152	4.85133098849596
Merged-chr11-68521557-4	8.39387152435024	0	1.29258880926605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88607023-7	33.9323338802882	0.216482543088716	0.323603182362979	0.668975321898697	0.503511220283458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24487917141101	5.37216609806
Merged-chr6-117816464-3	8.54643218856625	0	1.31046503722597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126755889-6	20.5464949092354	-0.558544530931532	0.434590326059992	-1.28522081012551	0.198715133577732	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95745490446383	3.19611497719938
Merged-chr14-14684918-6	16.8157997093544	-0.348568941913306	0.365414826509458	-0.953899285485848	0.340134625195195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25354265153539	3.77589999173672
Merged-chr8-82372988-5	15.1989105307785	-2.36988758857567	0.766271583582965	-3.09275149874989	0.00198310118427694	0.0321957093137295	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17675919774952	1.37038362634479
Merged-chrX-36088816-5	19.0244098809764	0	1.29218069581658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64306227-5	11.9963542697671	-3.14084621681148	1.07561257440769	-2.92005345748311	0.00349971347151611	0.049661732141084	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97088865551058	0
Merged-chr13-20428816-4	20.9835003936092	-1.05408952601562	0.387046385385655	-2.72341911930096	0.00646100336790863	0.0793014136137035	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78432843097117	4.72203695253569
Merged-chr17-50729758-4	10.2502805264123	0	1.29055090919569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135477111-4	7.27872819544648	0	1.29884202827495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62642687-4	9.0226722038936	0	1.31200468227739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70873677-6	20.7739147896513	-0.409444565529068	0.363474151922926	-1.12647505568949	0.259964493133407	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43083342834249	5.00025966602215
Merged-chr11-43632720-8	34.6984762057342	0.204745850017197	0.235747930096285	0.868494794137002	0.385123520965486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63635866848074	5.76929313776595
Merged-chr17-15803623-3	9.73115007302561	-0.734630490399994	0.657315278625073	-1.11762272122541	0.263728160496028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08307360444571	1.88169983067447
Merged-chr11-44373086-7	31.7040627385826	-0.164010813009117	0.370456869976131	-0.442725796985988	0.657964080834999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16283557597466	3.35181598254482
Merged-chr14-73445737-9	41.457619121365	0	1.27744074192961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93689026-8	34.3548546166314	0.149251156437247	0.279535028823607	0.533926488803049	0.593392394640919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27957410829584	5.38038209590459
Merged-chr13-116951503-8	34.2330602332465	-0.622455538218384	0.399440588388929	-1.55831819878131	0.119157836979869	0.706825654096187	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8652606618347	4.30182073654969
Merged-chr13-64408285-8	20.9078882153132	-0.676409894205405	0.411543776542955	-1.64359160011451	0.100260590202296	0.622068792950935	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53161089949215	3.55135623780744
Merged-chr7-80766376-7	32.2962898089723	-0.877019488792427	0.396612725482974	-2.21127420388349	0.0270168545696145	0.236285334234549	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50074187797861	3.47069253198583
Merged-chr11-20915257-3	7.04267438571483	0	1.30285751072531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74662137-3	15.978315502941	0	1.31892739016818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54053696-7	11.8527887123846	0	1.28775120572077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7931737-2	7.03621865509245	0	1.33540000908258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152218657-4	8.46434284070112	0	1.3429453774684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143293854-2	3.51950977129278	0	1.34880088875313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108182969-2	4.5335398883342	0	1.31564705370773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88304653-2	7.25229147590952	0	1.30533144900099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74874579-2	6.1869133224224	-1.2548617495784	1.23564984665326	-1.01554801546503	0.309844670572611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	0
Merged-chr2-66158729-2	5.53242270698375	0	1.30555323771049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104958305-9	80.8062001083762	-0.502823470193535	0.321353663164	-1.56470433615977	0.11765225129973	0.700127858431124	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52561870443701	3.7439700405452
Merged-chr1-155494580-4	7.30560440609036	0	1.30145245513268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49771215-3	7.62736620282102	0	1.31701154370493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47778559-9	40.0196098443251	-0.159997719747686	0.307967405741421	-0.519528095392098	0.603392525885937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66196582398138	4.48270198425402
Merged-chr1-13332776-4	7.13916887269361	0	1.30891351721132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54040696-5	13.0923101101579	0	1.29478761582728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73972479-4	9.31773116340865	0	1.33199191005645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46607823-5	17.5830235402169	-2.43449492543455	0.480464746272571	-5.06695849033935	4.04222385971316e-07	3.96611351857081e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09877429564199	2.36818926292598
Merged-chr18-67504152-3	6.00288958404205	0	1.3137273133799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69437293-3	4.22310722347557	0	1.32526706335755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31112554-3	15.1580843476793	0	1.28909147487145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4047252-3	6.39136192684246	0	1.3133230018306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3430693-3	10.7181267465625	0	1.32972643336489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46852623-3	8.45053737596277	0	1.30561913548971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108570530-3	13.2536050110989	4.1957629480784	1.00582072603398	4.17148189481299	3.02625105707662e-05	0.00122220890961513	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.1552264446993
Merged-chr2-33870496-3	4.52048952770259	0	1.35109218283373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54619096-2	6.44278112009961	0	1.29249913501479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87555207-4	9.84114400984955	0	1.28767805397047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17509357-3	15.9896004265959	-2.72097000210238	0.549014965144608	-4.95609441426737	7.19242759638425e-07	6.15178499624771e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43774044483301	2.93171244472175
Merged-chr14-66232624-6	16.6520895663926	0	1.28749268391637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120398435-4	7.07531128181934	0	1.29435976777949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85379444-2	6.66502583058721	0	1.34095217533923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88390280-4	7.2803149446084	0	1.31989582792083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84211659-2	7.85263462172855	-1.24913762318049	1.20583818777651	-1.03590816399987	0.300244988529607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.817927922717954	0
Merged-chr10-67200450-2	5.50677646432353	0	1.30721799540698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20787203-4	13.0113032559793	0	1.30370942630664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10944142-4	10.1822802775431	0	1.29943199719835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44384651-6	16.4328093802039	-1.30432697825953	0.480611772154504	-2.71388895118495	0.0066498453494135	0.0810105880318372	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18014157311149	2.93342099941049
Merged-chr1-52748401-6	12.9614063419813	-0.50039251632948	0.452508733247174	-1.10581847280316	0.268805097747926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20178736823228	3.49799764014767
Merged-chr5-100663110-7	47.820866568235	-0.864716796131591	0.312914922984956	-2.76342460079209	0.00571983057120113	0.0720649034827143	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89571396178525	3.96610994239437
Merged-chr19-40999073-3	6.38444735782149	0	1.30581516260233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172431018-3	10.6948176512504	-1.61729294131099	0.631135446189494	-2.56251324668178	0.0103917623375766	0.114271206512045	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22761082489743	2.35023356413849
Merged-chr13-85223380-6	29.9652735207302	-0.352827662113333	0.26776912290645	-1.31765626403684	0.18761874165681	0.973644718258092	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78211278316318	5.42044361863123
Merged-chr2-181930866-2	10.6443792771204	0	1.36787536855885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70753746-4	9.79152387552065	0	1.29609997505967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88714951-4	8.90533432035883	0	1.29032427641567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37325730-6	16.288574847054	-0.828008299925281	0.593535926377997	-1.39504327055336	0.163002791517973	0.878833119797013	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97558228243539	1.90763661962622
Merged-chr1-153500671-2	3.13178462920093	0	1.34453275772391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19722166-3	6.51438367442085	0	1.32130842144323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43371519-2	2.56374628220675	0	1.48609580948826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16082325-4	12.5682933433669	0	1.29588932385416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77946471-2	3.0819788508881	0	1.33118430222845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53542213-2	2.77570926304475	0	1.45123923469019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62504881-2	2.69978703611673	0	1.58599413195962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25086411-2	4.39095861434899	0	1.38322402258285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86189277-4	9.03143888383969	0	1.31306777197561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70708152-2	4.74181436587694	0	1.31952208376552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12123059-2	5.36503545586449	0	1.30922738811921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105545193-3	11.3484139567036	0.419756264633863	0.614356035462868	0.683245936238928	0.494451450303619	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01813083670589	2.54670624951218
Merged-chr12-108931300-2	4.23764786834102	0	1.35187438753105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11788744-7	29.5935814998759	-1.30088258307998	0.850439984532975	-1.52965830245431	0.126101329921822	0.734927683647273	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1634330602586	0.683637474991079
Merged-chrX-7563299-4	7.44161091959846	0	1.29944367061136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21400093-4	6.98612480603046	0	1.29765419400158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68843527-4	7.08149906790887	0	1.30129799853442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51553547-4	6.95294311462602	0	1.30122679878095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110798441-8	33.9906942959909	-0.733512160751548	0.33379330465337	-2.19750411564806	0.0279844628667711	0.242851621579287	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20398474459657	4.44750745489903
Merged-chr7-19028292-4	12.1678951505015	-1.53671638081509	0.523091409758648	-2.9377587781916	0.00330594139873214	0.0477203549020433	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22804732037137	2.36584508251498
Merged-chr5-129914214-3	5.68081065542662	0	1.32238392062073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13525875-8	32.9121071506461	-0.629061220059143	0.352368329800775	-1.78523768130583	0.0742227723303476	0.497355922640979	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74038771743946	5.06272316169762
Merged-chr7-55957390-7	20.4070797306213	0.440079164701563	0.447862027120618	0.982622187308238	0.325793420373218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15983878415035	4.57224970769799
Merged-chr16-30465030-2	6.88645033157963	2.46177221717581	1.20631016609812	2.04074564433006	0.0412761158880487	0.323137542688443	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr1-171230706-11	48.803534194735	-0.69329619223769	0.385740711081145	-1.79731143828333	0.0722861913427644	0.487422707613691	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84142791541238	4.86758447031344
Merged-chr2-102532326-2	8.55578643062145	1.45804344592912	0.919365837641733	1.58592302023006	0.11275677308264	0.678497285949895	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.832882082720823	1.81534621159246
Merged-chr14-73234725-2	6.16821977810989	0	1.30584231729928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-16256375-4	12.453901133013	0	1.31056669050304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35751095-4	14.5370005724721	-2.38103113732495	0.616947716551999	-3.85937263960077	0.000113678483118774	0.00350232633563387	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85737943447521	2.08137696679909
Merged-chr7-19157629-3	5.86390805536344	0	1.30662515681161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94814847-1	3.08457473341814	0	1.32744840037358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89458761-2	6.25756010401833	0	1.33199656585019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59834961-1	5.11351914626222	2.39431988052666	0.939673671155996	2.54803338012136	0.0108332104772956	0.117945180248143	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	1.75015004207908
Merged-chr13-48978033-3	7.68959466016733	0	1.29762383324939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96413906-3	6.83666757494367	0	1.36411983749164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102453725-12	107.709375898355	1.56035420619328	0.214783651983298	7.26477174489342	3.73668706605353e-13	3.0908551014979e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2460252853693	6.76864002163867
Merged-chr14-75841925-3	6.43392994067382	0	1.29946016153787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78538511-3	10.2546738557286	-0.965615551132926	0.569031744226321	-1.69694496120918	0.0897070665996183	0.571066534244389	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86334767324351	1.88261029748791
Merged-chr11-8634843-4	9.13423814959916	0	1.31405972218525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39415996-4	7.01038597749613	0	1.31254319539125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97772770-2	4.5920386622208	0	1.30818376801794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55039770-4	11.1925121143302	0	1.31207259898626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92335346-4	10.3495152550569	0	1.31123566129678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79153273-8	77.5544706859162	-0.392315417113184	0.296199400890147	-1.32449767262927	0.1853378155046	0.965103585302702	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00075040268009	4.57647058910511
Merged-chr10-99085110-3	6.33963932740462	0	1.29087986620118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152568871-3	4.16587843143362	0	1.32579366004743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25474019-3	6.71406222066709	0	1.29517864682035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19941371-5	26.0554582585803	-0.484969430123374	0.518682904517447	-0.935001762925965	0.349787390898622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08474977787276	2.31447273151311
Merged-chr6-148609153-4	8.24141573180812	0	1.29364398407456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91029119-6	22.6859442080133	-1.35980503969463	0.462700447633305	-2.93884530834146	0.00329437453861522	0.0475744085304641	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33120966281957	3.858551231825
Merged-chr16-84581688-3	12.0461354197396	-3.33171464696404	0.808825500918256	-4.1192007956989	3.80188741508558e-05	0.00146398429597043	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28985872919348	0.666688015277142
Merged-chr19-47508831-4	10.1607224625755	-1.74869033097678	1.14820943368912	-1.52297157615085	0.127765816792406	0.741341241708093	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0
Merged-chr10-49050140-5	16.1639944686111	0.168667248284241	0.507961392673822	0.332047377452064	0.739853484511963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60665234139942	2.6594252635118
Merged-chr17-47408467-8	39.0768029395928	-0.400923708518022	0.296841661777056	-1.35063153237276	0.176813494691542	0.932004083577759	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60295705706885	5.21719018422928
Merged-chr2-102887241-4	9.63730143737208	0	1.30176594037508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84556741-2	11.7919498938415	-2.76772028569071	0.529834259673957	-5.22374730428697	1.75338021002801e-07	1.98229036685969e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24214671000329	2.21043983090998
Merged-chr17-63493317-4	5.66143674981163	0	1.32603650435216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127271365-4	7.88425556612131	0	1.31021610644862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129545673-9	38.7999773284093	0.442818019250242	0.291264081697536	1.5203317095243	0.128427628339175	0.743672033851859	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06603370138172	5.56652824548924
Merged-chr12-100684773-4	8.00174884890012	0	1.31571500094357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17542635-6	26.3606322424987	-0.149472384109372	0.281840305464045	-0.530344245345849	0.595873275067249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57139789134427	5.52465816696631
Merged-chr18-67768557-8	24.4076036878235	0.0661675727502922	0.288261879286693	0.229539795251542	0.818449394029526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70722975475146	4.77109406891968
Merged-chr7-45339945-1	6.41012252001838	0	1.30389336241029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165653785-1	1.93620315970316	0	1.39430341585453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54620453-1	1.34102189926089	0	1.73456555684716	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44698772-3	4.73396209589301	0	1.38591562275928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72169298-1	2.87786261031229	0	1.39926856771891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83640067-2	2.70120979469076	0	1.44716716413097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-16332-1	2.05851171459138	0	2.43325270482097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67395894-1	7.94778331078918	2.04553574703342	0.707997240239864	2.88918604589533	0.00386240481163332	0.053666320395703	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39000747175572	4.577155824073
Merged-chr14-96099795-1	3.85633751892801	3.30093803209957	0.935669264752512	3.52788977521099	0.000418886545599243	0.00962128654085347	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.79695861841345	3.83934070333818
Merged-chr4-32011332-1	2.85392635383963	0	1.34095279896147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5063663-1	1.74962958107173	0	1.47244419547956	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53406044-4	14.6697615867674	0	1.31994720432906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55024379-1	6.03473545853951	0.436461658582447	0.767598690667953	0.568606569928675	0.569623165239989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55861501734966	3.26657236696409
Merged-chr12-26436515-6	35.5259089212679	-0.430155978441168	0.287943398437237	-1.49389074650006	0.135204177448587	0.770476339021137	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30168631102875	5.80703439447297
Merged-chr13-92668431-3	10.7277362482621	0	1.30233542224505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129811626-5	19.1057234300502	1.88773517149322	0.615588246759282	3.06655492763395	0.00216541018950844	0.0344368202101774	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74936970232982	3.25628520254291
Merged-chr3-151739812-1	3.04725986497853	0	1.46695900304179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71865590-1	4.93840283205796	-0.443784313142637	0.753212194230073	-0.589188964998461	0.555734518836092	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52367579873825	3.09470474372226
Merged-chr12-71864701-4	8.40882763341995	0	1.29259578199396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-14506647-1	2.97395253424629	0	1.34425918640616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37508164-4	7.47166860953764	0	1.28930597455998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85262358-2	11.2738113512566	2.15819537721599	0.802507266939225	2.68931568114939	0.00715986748234438	0.0854063375061884	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29727068782171	2.19968205137681
Merged-chr18-62985440-4	9.25391088492247	0	1.29240841964833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37010276-7	22.4476562657792	-0.427433440774767	0.353112151714725	-1.21047502528343	0.226096668420627	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76077833248392	4.36640084140152
Merged-chr14-61689535-3	8.0404835153436	0	1.30802085247876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13684294-3	11.6413704783079	0	1.31252820719829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18760084-2	5.38783768914408	0	1.32865773301392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64510272-2	5.14121197712151	0	1.31791717770395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113445641-6	28.8743500151488	-0.0577374577647105	0.30724587729326	-0.187919389751815	0.850939842693891	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82503588770457	5.63110736962259
Merged-chr2-101779208-9	39.2413129340483	-1.63632623150943	0.334317884645692	-4.89452197044018	9.85449677924457e-07	7.9304426913364e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94184009184428	4.29257392784299
Merged-chr10-93429713-6	17.6963737734533	0.870640964892711	0.391362097853187	2.22464303433727	0.0261052112591287	0.229994760002565	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5490717879269	5.0642810019875
Merged-chr11-99073964-3	8.25725647830941	0	1.28998578748888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60740588-8	25.4062920376214	-0.718136250959169	0.300699852471331	-2.38821617322754	0.0169303799746042	0.164559364840173	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29001811687853	4.53123240457247
Merged-chr13-41601223-2	6.45270571461442	0	1.32018525288899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109357848-4	6.88978362464495	0	1.29772543794821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34725558-1	4.39237906303446	0	1.35948672533969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114784795-4	10.8453387511078	0	1.29745767946595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94035252-6	28.8506284864818	0.915476301517198	0.612697356326505	1.49417374183894	0.135130213861533	0.77022021749414	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67249295018213	1.69469308021391
Merged-chr4-133463350-4	23.000216240369	1.2306630297547	0.403566805670272	3.04946544776081	0.00229249001768234	0.0360108299748727	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30936334043175	5.45397633820078
Merged-chr6-146638640-7	19.1740599445546	-1.17773062263458	0.528550340009557	-2.22822791602647	0.0258653204028189	0.22840030271204	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32361883731132	2.31653289104558
Merged-chr19-46607725-7	36.0370554496285	1.39945682089432	0.268883523176855	5.20469534302347	1.94315126533939e-07	2.14332745881612e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40996873778525	5.77879187255843
Merged-chr8-70001855-10	49.9849330214996	0.328487003746284	0.254531240896484	1.2905567214041	0.19685743132925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24887927395162	5.20690034019246
Merged-chr11-80136988-3	6.22910278259281	0	1.30664959432215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77291220-4	11.697461229149	0	1.29051347429011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107432341-4	8.16773978296116	-1.33247918216893	0.935197334326149	-1.4248107145526	0.154211924273419	0.846035799141203	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8962460350709	0.994591904006138
Merged-chr3-28171477-4	11.9709341583339	0	1.28373933464341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21919111-2	5.68218891450042	-4.37252717567785	1.06558112975927	-4.10342024043319	4.07086835695372e-05	0.00155611178913496	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91267446184225	0.382164212378408
Merged-chrX-155728588-4	11.049659177218	2.65735293981405	0.700505039582837	3.79348154496726	0.000148549676457157	0.00433547438935659	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.78925238951141	3.07971069047672
Merged-chr1-78507379-2	6.42589632752558	2.30912232779309	1.21845207676781	1.89512773774288	0.0580754806885536	0.414346583805462	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.10669213789164
Merged-chr15-98541140-5	13.4315326502777	0	1.29795542661011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101960007-3	8.94579418507332	0	1.32282099698702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146780144-4	9.14554140152361	0	1.2944184449634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41819667-4	8.0175093004864	0	1.29928264464254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20990873-6	26.7422290469549	-0.164856065507265	0.428108425345452	-0.385080170693296	0.700178018826273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3191332021989	2.56753769839837
Merged-chr6-122596802-8	34.1857457995407	-0.171774837022777	0.383591205719006	-0.447807025973917	0.654292472313256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55292235272698	3.53241156735701
Merged-chr2-6380079-4	13.9896036357753	0	1.32904084919622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34047078-10	64.58528657513	-1.2242801925898	0.265402675728313	-4.61291578628644	3.97059205774405e-06	0.000242305449705906	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52379662251565	5.30388209209467
Merged-chr7-89412317-1	4.83985691736905	1.14523970600252	0.74093601619211	1.54566613172382	0.12218522076078	0.719113341964686	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82702211351274	3.08251563949621
Merged-chr10-80323652-6	15.6489732407794	0	1.27897012224231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12842803-6	24.6868294507323	0.625575721909467	0.465063075397252	1.34514167003069	0.178579488699406	0.938889312780704	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97937159405986	4.36476581316883
Merged-chr19-10709526-3	6.06275110939927	0	1.29935899585405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-98346463-1	4.92395437861251	-4.97451218048811	1.24359551293146	-4.00010463913782	6.3314481768013e-05	0.00220951692671176	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29173187841437	0.420961122473315
Merged-chr12-44283529-1	3.91816670034764	0	1.31186523029947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162509582-4	24.8456987767952	-4.36820184057721	0.726104628753807	-6.01593994528616	1.78845871089798e-09	4.17387939008354e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38925310332526	1.11548603074465
Merged-chr11-67125692-1	3.89518733662227	0	1.38124218813663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38931945-4	8.77585059864681	0	1.29919411394587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-96087162-3	7.0282589960778	0	1.30846812075664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23887500-1	2.37301837194224	0	1.39553646152641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35711784-7	21.4590658445229	0	1.28833780568155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92656414-3	5.33547851397023	0	1.31486769985814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67359778-4	6.09913839468688	0	1.31589650397386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30621923-2	4.11541561405699	0	1.44153324986723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67564458-6	24.3245881106155	-1.69430794959082	0.63886692185169	-2.65205145491027	0.00800043486852277	0.0930077240559489	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50286656346719	1.85144754364776
Merged-chr13-37751723-4	7.53696827673018	0	1.28888967672059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128984775-4	9.32479125962077	0	1.30058475227323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47262184-4	8.39586826069638	0	1.29444264309953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83135649-2	11.6867301714631	-1.58644308638687	0.715414585803629	-2.21751571447876	0.0265878704158948	0.233240835037865	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.858299091828	2.19206322264949
Merged-chr2-119263065-5	16.7051015602015	-3.70364630979685	0.682589329420031	-5.42587783044264	5.76703964032774e-08	7.78621843671192e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01734626886392	1.15307255889252
Merged-chr6-116694194-3	6.91981099648572	0	1.29982640438732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8848400-5	28.6336589332467	-0.85285450199311	0.671093287530631	-1.27084343986108	0.20378435128404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50334668295401	1.57597341069752
Merged-chr5-107688009-4	7.07545594260576	0	1.30391585970899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155280622-4	7.48510365441711	0	1.29842420873876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31108078-4	10.0309148054496	0	1.30269905816983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71016124-4	12.2715212348223	-3.88479939068304	0.987654490561156	-3.93335870773575	8.37670865948933e-05	0.00275344267637319	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02006788825535	0.469435083901436
Merged-chr10-93594144-7	37.376066875073	-0.430642730589673	0.306533464960374	-1.40487998804745	0.160056968317017	0.868386700006939	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16398318065446	4.84592898031983
Merged-chr7-101618507-8	31.2133211201032	0.309129765256587	0.299958309825832	1.03057576713271	0.302739804777807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6120140914057	4.8597601898036
Merged-chr1-164088088-4	9.88185351215214	0	1.30127379745936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64289418-4	6.84480787232873	0	1.28893981731381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68907869-4	7.75313279613876	0	1.29901163388191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125389730-2	2.31576726732033	0	1.43660396665316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144980231-3	6.53450892627508	0	1.34323145380173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126405262-4	7.38057278560003	0	1.30879654697282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35947087-3	4.89418029524017	0	1.33718528349685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31061360-2	6.53780132425755	0	1.29526638195089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111161524-1	2.54683695765312	0	1.36620989038654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85507184-3	4.61857625109467	0	1.36482087995037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28246838-2	3.28374778868519	0	1.34054095168782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121743369-4	10.7990835951549	0	1.2938706792281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59511647-6	28.9509794833406	-1.24511029698926	0.574610065180309	-2.16687867553895	0.0302441063462179	0.258242698719451	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28390779068717	1.87744667331019
Merged-chr3-107155783-5	28.9403888898422	-2.32048600685583	0.34063238478156	-6.81228829238862	9.60583596020468e-12	4.90392934887137e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.69039229676401	4.28420214190739
Merged-chr2-155402216-4	14.7725806483048	-0.820932139517704	0.444593901310657	-1.84647638462338	0.0648230652198236	0.448772381157002	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50473934952611	3.77281462953897
Merged-chr14-76732573-1	6.53202525550915	-2.32353790187159	0.706828474617454	-3.28727263446641	0.00101162842487484	0.0191777983904471	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45307022316344	1.64143129445672
Merged-chr14-20798953-4	7.48558119086574	0	1.28941437822326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43501979-6	24.6490446654962	0	1.28036419796244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41958847-4	10.5370240082058	0	1.3006467253895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-91284100-3	8.27871327300238	0	1.32387854407188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3141132-4	35.4729960673216	0	1.28646695824608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106258034-4	14.3450151751079	-3.7281582576378	1.0293303060485	-3.62192605787528	0.000292417712726165	0.00731885412538435	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26694172909796	0
Merged-chr14-87044541-7	23.6278093472734	0.431688566883214	0.419296459086178	1.02955452527322	0.303219171652559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09662267116402	4.49055351335214
Merged-chr17-34312514-9	61.0103835989139	1.82538161832135	0.242552679147936	7.52571204215817	5.24337847105519e-14	5.71056349282621e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73920822697912	6.49800402205083
Merged-chr9-116084911-8	35.8965683935376	-0.67975117078472	0.299945837233332	-2.26624638986382	0.0234363017807079	0.212056019961525	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16911566785574	4.27544610918761
Merged-chr15-86203591-1	3.12547655319693	0	1.35612501228186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13207057-1	3.12372018359477	0	1.32923593673499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24735330-3	6.58210880599474	0	1.32542904705577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50402605-3	18.0794793578811	-2.72755531576169	0.550675905288475	-4.95310452040359	7.30387168505872e-07	6.2389385507431e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38305004138471	1.86961804807321
Merged-chr6-116487024-3	11.1598641042208	0	1.29921786216021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7050057-1	3.03980713686755	0	1.36758243480694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-14579680-6	31.7449255772024	-2.04887083589758	0.93382748946399	-2.19405710263854	0.028231304664944	0.244357764218926	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89163049145289	0.727201944460961
Merged-chr16-65470778-4	8.67824640222251	0	1.29299179574591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68204326-10	52.0271963619739	0.606019769760192	0.308675234157582	1.96329249223413	0.049612197328423	0.368613831338616	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.18588845490805	6.82081159248656
Merged-chr19-29828746-4	6.70167627776598	0	1.30022345957195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8929987-4	8.68719352821926	0	1.28982895810574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181090346-4	8.58644645326384	0	1.32033441583291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40521331-8	36.6652678358032	-1.25215426144034	0.342813765188702	-3.65257871355046	0.000259619976885114	0.00666344344443624	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83162203445162	4.61694660545929
Merged-chr17-73029799-5	21.7404480956939	0.697645192087617	0.439949464460667	1.58573938246034	0.112798441502498	0.678660064305517	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04912567401732	5.71419212631932
Merged-chr12-24597134-2	7.81105382704925	-1.70016333880966	0.567002311112395	-2.99851218502819	0.0027130130739865	0.041095167439203	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12185325601704	2.16596752412581
Merged-chr19-55383499-3	5.11291952747818	0	1.34904408749747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54295999-5	13.9402606327461	0	1.29203683538455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70946805-5	17.6423458588129	0	1.27749095938721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40581999-10	203.635770951134	-0.099574191052532	0.121798521775033	-0.81753201599975	0.413624460681976	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.85128042641455	7.76125294666825
Merged-chr13-103110019-2	10.3125761072787	-2.09938961444123	0.588907288347616	-3.56488984935438	0.000364009029302452	0.00862931848924714	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39822336719487	2.09197273807469
Merged-chr9-56207316-4	6.95103091643152	0	1.3305220901916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15262512-4	14.8561757796999	0	1.29091141561878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17595913-3	6.14625907264093	0	1.33943761601784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79619247-5	22.8389177760423	-1.51640098812194	0.665555469909002	-2.27839910673302	0.0227028095790947	0.206937898557054	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08867933786684	0.958904680953568
Merged-chr8-35540715-5	50.2372906905184	-0.259561479203468	0.405781522102369	-0.639658202913406	0.522394834357126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74658573896499	2.8138077918701
Merged-chr11-69401412-4	7.41199641077649	0	1.2947846799621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9917976-7	23.811082324471	-0.106316053685869	0.386012783696054	-0.275421069395418	0.782992758763991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18896275342785	3.42300931714834
Merged-chr8-104571235-4	10.200375747898	0	1.29142710831836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59717236-4	8.90749950510789	0	1.30380550081799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41331730-10	49.8959421040808	-0.676986108071158	0.235745533518055	-2.87168158805991	0.00408294130344535	0.0557933672971435	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16123830915257	5.46087349373304
Merged-chr1-156442307-7	25.0327815994951	-0.849102027693364	0.382984188244543	-2.21706810295571	0.0266184380792166	0.233477644929461	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43571761016121	3.52908746205369
Merged-chr11-105363048-4	8.46351975186834	0	1.30896478119867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133169680-10	58.8941830021636	-0.345878427170599	0.234095930764338	-1.47750721698273	0.139539725166134	0.787559412740215	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77408367783408	5.42657225916001
Merged-chr6-146616756-6	47.5929735354967	-0.438318370208061	0.30089219743312	-1.45672893463941	0.145191219402342	0.80932060249641	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.88535868416418	6.4203642136088
Merged-chr10-84286369-3	7.04618576411776	0	1.33698811789237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71980688-3	5.20238128348932	0	1.33034667750172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39761744-3	6.97577768383941	0	1.30637901814521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112217415-3	6.02515795397831	0	1.30049763430058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41136743-7	28.3305483212589	0.932170735498052	0.355797293701692	2.6199489203524	0.00879429383489247	0.100396912113012	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53614784692099	5.46299148810612
Merged-chrX-140504102-4	13.9498225434963	0	1.29457598905648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57559410-4	8.6012256680189	0	1.29699561229961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92722565-5	22.3649195485585	-1.00359434802823	0.596975006681524	-1.68113293989815	0.0927370954893261	0.585563652705141	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07803036486962	1.58180101474665
Merged-chr14-47352451-5	16.0249455300795	-2.24163090029152	0.563453110744566	-3.97838055651046	6.93862529992723e-05	0.00238011238240968	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63299465207031	2.38327122822273
Merged-chr3-95667702-5	19.0026816181932	-1.98971509737464	0.43797228848144	-4.54301596174836	5.54550506869251e-06	0.000314946019672189	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00835462385749	1.95933272142179
Merged-chr13-99028966-5	19.3951223846819	0	1.28992993868732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22855287-4	14.8787252953438	2.45837157326825	0.917362060915944	2.67982694947476	0.00736602295236351	0.0873417049256298	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.64254215594465
Merged-chr10-82666677-9	25.0806802143997	-0.215512455038188	0.417384708543215	-0.516340082966586	0.605616905686896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72137848641463	4.71289823633432
Merged-chr17-26012315-4	7.38506163717487	0	1.30402999408982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146445043-8	36.9018138389608	-0.677047814441705	0.318364192353799	-2.12664561751121	0.0334495391997138	0.278188377505806	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04656262261169	4.38546657651129
Merged-chr6-99205367-4	8.07006802033814	0	1.29813232990528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85500631-4	7.99507745520001	0	1.30062287347675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116243887-4	8.24674977167544	0	1.31644170606081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19200051-1	2.96548954789877	0	1.38744662871064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96751091-3	4.29916069328725	0	1.34351986528517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17842582-2	5.0793646456387	0	1.30873212876452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46795522-2	4.7289737929829	0	1.33713978413792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98062050-4	9.67806213094878	0	1.29143082869536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169973478-2	4.56784868565609	0	1.37238086264296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51220841-4	11.3599800027531	0	1.29571225512932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78382893-3	5.70208488138803	0	1.37296487234676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80156188-4	8.66703754823248	0	1.29959581186434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33791000-1	2.1163442955199	0	1.38785259827142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68196117-3	16.2801819243707	0	1.29363283329907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99381290-4	7.76093996156713	0	1.30327517814025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35799148-2	5.81815719593983	0	1.3422962505324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114335389-1	3.00694280309141	0	1.35877856150224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100667089-1	3.55966771348235	-1.79988205819271	1.05255494728522	-1.71001244432418	0.0872635718896892	0.559106321080854	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18875562771358	0.563523181795778
Merged-chr19-34577264-1	3.78832053175419	0	1.49016837110687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135980994-3	7.89619865127101	3.11467856559453	1.11355110721536	2.7970683567307	0.005156862159841	0.0667552128955963	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr7-53806888-1	2.44003255767416	-2.33409077545613	1.45347323088558	-1.60587118211596	0.108302216520661	0.65864277717628	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01074310944854	0
Merged-chr8-117342624-2	4.26488119935554	0	1.35321960844476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150860743-4	6.77209203557453	0	1.30391735389298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51305533-5	28.6379423147569	0	1.27963194597589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78046196-1	2.02076086668968	0	1.3922827740854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21568673-3	11.6399883941717	1.20747191765248	0.619608099622111	1.9487671616767	0.0513232370485899	0.377846805788323	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2225438081492	5.3853381157776
Merged-chr19-55774953-8	28.7501092242626	-0.333889533176576	0.345553830449118	-0.966244630373851	0.333921785134792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82564309196957	4.32575526998763
Merged-chr8-122556240-6	36.1878535015825	-3.95302916309211	0.500591614449825	-7.89671470513281	2.86350788754336e-15	4.4552092004621e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23900083771099	1.97799227303783
Merged-chr2-181483658-7	42.75458939768	-0.434291867853984	0.362353254671846	-1.19853171526578	0.230710083739243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89087765922944	4.3385701666754
Merged-chr19-16122646-6	34.8120584214144	-1.82609710200402	0.480892122479095	-3.79731132335902	0.000146274034907009	0.00427861373546707	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3458774269942	2.37850366884776
Merged-chr1-180265080-4	8.04426505762967	0	1.29871851237006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173451811-7	35.0184553681353	0.371717982286035	0.392990877845049	0.945869238299721	0.344215285168427	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74758226591539	4.23504712461358
Merged-chr17-8144031-4	16.6153231526958	0	1.29395671179891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-118071548-4	8.51257179946038	0	1.30087030744859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103644444-3	6.97481777004084	0	1.32315435120828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62172892-4	8.5023190439124	0	1.30367376143106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31613948-4	8.71764321585817	0	1.28968159015177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90057846-9	32.8483942070566	-0.712813300670876	0.3442143211245	-2.0708414988145	0.0383736106733704	0.30671247515086	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58579713555753	4.85436097790836
Merged-chr3-103872752-8	32.9202631290569	0.304457106558708	0.296071821200091	1.02832179477476	0.303798482201614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60351623916486	4.86326812128839
Merged-chr6-121191794-4	10.7295654382574	0	1.2981325810818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91347604-2	5.10855648969694	0	1.33703654978049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59041790-4	8.39749378540535	0	1.30432182688089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145510875-3	5.60409426690192	0	1.32062329355565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166900985-3	7.45685185192009	0	1.30060334696049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154300729-3	6.32851556021884	0	1.29655605986605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122575368-13	72.5937807835594	-1.31657456510199	0.259555397393826	-5.07242222015649	3.92783696136156e-07	3.86548846501706e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.93367518034362	5.59072674999784
Merged-chr4-104697933-1	3.13340533605571	0	1.34911886415112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93689382-5	20.6487754327148	0	1.27994168144002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24636170-4	12.6375137156652	0	1.28063648501572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99132603-8	27.5574984427067	-0.931141799503996	0.360008568552877	-2.58644343729622	0.00969720848190193	0.108454278290603	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41797165997723	4.46693596608714
Merged-chr2-90567266-2	9.00253781683424	-1.71817425912481	0.851586990022187	-2.01761450005247	0.0436314255509073	0.336583762730726	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48646291188087	1.03295826569721
Merged-chr14-17746672-2	4.06493384402225	0	1.33296972643372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114877155-4	9.63471876125224	0	1.29074194983661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99149248-2	4.49883655930091	0	1.31657461252332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168570130-1	2.42133927159737	0	1.42204283867724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67297205-5	15.3451069369003	1.0666112700576	0.580435463441802	1.8376052761024	0.0661205907946533	0.455579515612338	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02967314372602	2.41655596585847
Merged-chr12-111426266-3	7.47321901622417	0	1.30011702169136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81024714-2	3.95721952997477	0	1.36632108071579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30498717-5	14.0801093980299	-0.0820921808080305	0.365909982817765	-0.224350754728972	0.822484386008969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83064401558083	4.66571694866297
Merged-chr1-39464006-4	9.41044856354686	0	1.30606670577848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43349669-4	7.47117950576695	0	1.31839427008598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68248877-4	10.4530290017574	0	1.30011573816964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114883002-8	21.3907872644537	0.994961281424749	0.41543601917551	2.39498078043254	0.0166212365009456	0.16220599169516	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37993548055443	4.17282387057061
Merged-chr9-95188506-3	11.0110128814497	-1.57299092013738	0.621298164643598	-2.5317810507934	0.0113484829473147	0.122150875749502	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79119485478199	2.46548184580302
Merged-chr2-156850668-4	6.4243023455497	0	1.30128350560436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114947586-4	7.73005334430896	0	1.29827677491087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120467540-3	10.7385008828058	-2.26557942746355	1.10981183167988	-2.04140860891186	0.0412102294677785	0.32297665145094	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00027027317926	0
Merged-chr15-74930925-6	22.9934780406282	-0.216631864954313	0.377037635221532	-0.574562973871371	0.565586899228646	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06217010230768	3.88779571416984
Merged-chr14-62844040-4	11.3017574042606	0	1.29629650046112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94432395-6	20.2494588920036	3.49645411041742	0.987020547331906	3.54243295123791	0.000396454193756171	0.00921618489690171	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.90896656829731
Merged-chr15-58750227-2	4.4211682533555	0	1.34322675059067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129554701-2	4.71307893662655	-2.66528139833868	1.15557578328869	-2.30645314386346	0.0210853254165976	0.195161710293624	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48266283661607	0
Merged-chr12-102381798-4	9.54504247195199	0	1.28853528633928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135602451-4	8.31673977582167	0	1.29766364937541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29950991-2	5.807478606036	0	1.3736197768451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68145013-1	2.85668706650691	0	1.43126122934512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59967371-4	13.4120172848162	0	1.31573965415345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127722603-3	15.302396423838	-2.16781305209717	0.731968858428999	-2.96161923712147	0.00306025974262034	0.0450091679363648	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5934832387807	0.793480537552656
Merged-chr18-69400116-7	21.0511919293916	-2.31014008490075	0.469761642608901	-4.91768564174588	8.75733944400548e-07	7.26816275353377e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98594340488996	2.16975473850456
Merged-chr3-52756452-8	34.8393157644426	-0.889443901756462	0.346404601569062	-2.56764459169327	0.010239207682274	0.112907739656746	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89096146403975	4.01748266157724
Merged-chr2-44961258-4	14.3273224355428	0	1.29152675647672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21200237-8	24.1564529131827	-0.973632356133107	0.331485518554488	-2.93717915756572	0.00331212697752614	0.0477885293604379	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14285331133891	4.14717355650071
Merged-chr16-70329284-4	8.52098079420859	0	1.29263395404298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-67568441-4	7.50901853944367	0	1.29390051720465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99307731-3	13.8709294818856	-0.418751040746166	0.412687893372212	-1.01469184696554	0.31025274174972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50753964345131	3.9872399928445
Merged-chr14-103376945-3	9.22638690534966	0	1.31606395884396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19956671-3	5.12807849975188	0	1.31455736653218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44977782-3	7.19420516572065	0	1.31050945295704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77936067-8	30.5816179529622	-0.233765336365153	0.284310104220744	-0.822219586623107	0.410951933219153	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15385099232462	4.88049491750017
Merged-chr7-101033534-3	10.0752304733855	-2.70102866156741	0.575722526086511	-4.69154590828281	2.71148411410104e-06	0.000178433676656643	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15963817880536	2.66796869820479
Merged-chr18-76161006-7	25.1503124629711	-0.439906912390878	0.37671397928948	-1.16774777835584	0.242908518283687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36808368443859	3.89350703465938
Merged-chr6-8427771-6	16.0491304221171	0	1.28686339229207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85575638-4	8.21167136172034	0	1.29597327693389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169928104-8	53.3191688703624	-2.18005668026642	0.347463804410374	-6.27419792391284	3.51441220376173e-10	1.04864283044299e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95361814978816	3.11577946735657
Merged-chr5-35670677-4	9.85897521995296	0	1.30996674272579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48842455-4	13.1539708885923	0	1.31061573935753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71735732-2	4.89696411636442	0	1.3546268145141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40525627-2	4.57765468360091	0	1.36365372205592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122880086-2	7.31398641069645	-0.121847038835676	0.65779834947356	-0.185234637534726	0.853045002340831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91189265756177	1.93017649057304
Merged-chr8-109458245-1	4.29508019722007	0	1.33720938690073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38742697-1	3.22232706160678	0	1.43013874551541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61377813-3	4.65899863887696	0	1.34359849502704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118709261-3	7.48383095689263	0	1.30402793815407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87187103-7	22.3910022795766	-1.45249352217675	0.422897785693691	-3.43462077909486	0.000593383576406675	0.0125689605134102	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02608446204736	2.97187918383725
Merged-chr6-47175051-6	27.3868159784622	-1.40030797060881	1.07365885839167	-1.30423920006254	0.192152038192166	0.989625400985599	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.94451236602085	0.420961122473315
Merged-chr3-138521972-7	14.8712310502592	0.59822708771794	0.62499397446718	0.957172568308265	0.338480160420931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19275951578615	1.7414873742332
Merged-chr2-165061780-6	20.3563767199819	1.9403957440794	0.453155954537526	4.28196016106573	1.8525415455293e-05	0.000826886474277034	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91866487964573	5.06593221879814
Merged-chr13-95845265-12	106.613606742688	-0.161483353644067	0.17193943072015	-0.939187439249459	0.347634516863134	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.09805725005377	6.94977033983467
Merged-chr6-38805836-2	4.86896035584347	0	1.33182627892599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152809106-4	9.67506935928773	0	1.28756153671572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83831310-2	5.95718917425199	1.52812562403326	1.03347625979667	1.47862673142963	0.13924010425087	0.786479717553576	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	1.29451429493117
Merged-chr10-39449382-4	10.1463510416347	0	1.30144689263177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56535232-1	4.01380827898352	0	1.36729514865112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124142025-4	9.92047352183337	0	1.30588213339182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107832964-8	32.0835920943349	-0.277933229522405	0.376069347127661	-0.739047815636133	0.45987796290574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46984267864159	4.03814434318476
Merged-chr8-83736819-3	9.62059102718658	3.12566337119302	1.09217307730665	2.86187549953261	0.00421142303265744	0.0570361967859136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr17-67213805-7	18.2637121200823	-0.806420506629529	0.517163199497983	-1.5593153329787	0.118921764420223	0.705989809458966	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4108200152855	3.12426893426501
Merged-chr3-146607442-4	15.2387347718408	0	1.30824849736774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-53459640-5	14.1812517368225	0	1.28291064102068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96239113-3	7.49176185420103	0	1.34340979821218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149946683-4	6.89435556996672	0	1.29515405362121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136113206-3	8.36774599721946	0	1.29237332947439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24674427-4	6.40643867678418	0	1.30312629928195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15830321-2	4.1824977330802	0	1.33704775361841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37222049-4	13.6249535896908	0	1.33675758651123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57423586-4	7.41164130429204	0	1.30109615625917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106283894-4	16.1157199776735	0.0218981317528918	0.709991223584449	0.0308428203412674	0.975394890956165	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57733857892177	1.51789747318134
Merged-chr6-34868487-2	6.28141117127763	0	1.32521742478943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55731168-3	5.3025388343119	0	1.35079007065622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121497902-5	29.7504935465127	0.415238725199064	0.238530101066366	1.74082316379656	0.0817145803443699	0.533545260509911	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75069844634203	6.1784658713643
Merged-chr3-127289011-2	6.4647141043028	0.943377106570341	1.04238822743343	0.905015119839876	0.365457377141201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0.989878296978726
Merged-chr3-52257974-4	11.3462914420413	0.1078893397081	0.736456531291773	0.146497906018781	0.883528342840841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14918067208558	2.06239241693004
Merged-chr10-59369631-3	4.49504415460215	0	1.31434995316294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43751048-4	7.12626285188083	0	1.31080298380961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35757173-8	52.1427930809138	-0.801551055623781	0.337438071619568	-2.37540195679953	0.0175298487566568	0.16907830211845	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14321203581922	4.1508069030774
Merged-chr6-52955476-7	20.3944499683833	-1.48215218855488	0.494679940207672	-2.99618413459955	0.00273381298950735	0.0413335825109549	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18658545829	2.82286752253771
Merged-chr9-31926025-4	8.92564821340209	0	1.28413992847005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69257774-4	8.01506374076495	0	1.28522726665067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8463005-4	8.72330954558162	0	1.30628845649068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95215345-8	44.7857523880094	-0.0270123455456446	0.287005617764417	-0.094117828619707	0.925015558055552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69288352226283	4.70545175658147
Merged-chr8-68926583-11	58.1684154712515	0.0875345242373382	0.284993575558223	0.307145605180337	0.758732546319808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22315401804763	6.10409078161809
Merged-chr6-131278338-8	22.6139054788846	0.301937641208137	0.409089928573504	0.738071558644803	0.460470965803806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32206961132723	4.41005778403024
Merged-chr6-57641987-1	2.13986093130934	0	1.46242176943132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94366183-2	5.76478083924877	0	1.33466721661349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53386939-4	10.304136888978	0	1.2927384915921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90494329-1	3.22991693604328	0	1.37544926330481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148941115-1	9.6414156453873	0.498014519340623	0.86266742973754	0.577296072823962	0.563739466161525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43703385109542	1.58756080918295
Merged-chr4-53125683-2	8.89794909856876	0	1.29788325082617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77167516-1	2.97716642744417	1.16961505110071	1.23954086487259	0.943587326764683	0.345380570928316	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.666688015277142
Merged-chr1-167242331-2	8.91833904658132	0	1.3746029897953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35657796-3	13.0992549397155	-0.596111537447454	0.5609546327904	-1.06267334754358	0.287930111598156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47221974465883	2.51665517716335
Merged-chr17-32492480-1	3.71173546515896	0	1.36100054560938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5996143-1	2.80761226451616	0	1.33705925258636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143956384-1	2.60535860342679	0	1.36366798432218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95322536-1	2.63649131861931	0	1.41667730396991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31918284-2	3.99869341425322	0	1.46001800298184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24037684-1	3.01940136773018	0	1.33960321678383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50970616-1	2.30003574730146	0	1.35742144547328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38594292-2	4.49259188922293	0	1.32055086353498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156455254-1	2.8839729019117	0	1.36057996941264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52820476-4	8.09029969319541	0	1.287589621409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60442826-3	15.0960012553841	-2.49568366429015	0.913217721042058	-2.73284629369912	0.0062789626906876	0.0776504723667055	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03536934683977	1.56605965819909
Merged-chrX-139432800-6	16.0332569665176	0	1.28711543773697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71276429-1	1.64283242856811	0	1.43585239281493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25706485-3	8.9407757068868	0	1.28921810793268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35068439-7	20.7209038214525	-0.678224339242899	0.453317610956067	-1.49613498979776	0.134618481467832	0.768269491913276	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.109495948481	3.96705202963607
Merged-chr16-92869856-4	7.5847416745858	0	1.30122180534165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68167987-4	8.5904915889953	0	1.29495526370435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148536758-8	35.1234082583289	-0.150098318559631	0.307971224764749	-0.487377736911255	0.625990667580418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7392068247321	4.50012225793483
Merged-chr9-95564439-6	11.0811608675133	0	1.30513615794698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62635493-3	6.69811738668838	0	1.33323164873258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40766934-6	28.501627510585	-0.651635921810608	0.499437216954031	-1.30474041519134	0.191981254596383	0.98913561955809	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.25674728465375	5.27805184761966
Merged-chr19-55544626-3	7.58313774595975	0	1.2915345968783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146808516-7	36.2663300492909	0.327693949475411	0.323182120763147	1.0139606383596	0.310601534732758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71451977259377	6.04542272251597
Merged-chr9-111074121-2	3.8514315816979	0	1.35648306639092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100747255-2	5.89115282505287	0	1.3157127674902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29842961-3	5.62812712343582	0	1.36981987312548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117083612-4	7.56719360112137	0	1.29283471967266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90414761-4	9.12160608462326	0	1.28492291342604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111656673-1	5.98827295533085	-2.85312039019856	1.03554235194198	-2.75519430455745	0.00586572893978513	0.0735435699724409	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60081995110149	0.61242769162773
Merged-chr1-131438751-5	20.976718130777	1.16029701228925	0.470672915643982	2.465187551108	0.0136941550774547	0.140325898963675	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41066133921042	3.52416959009059
Merged-chr18-4239075-4	9.00837092210356	0	1.30937382236033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67827141-4	7.0095118459987	0	1.29760377338876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150611826-4	12.8543372128357	0	1.3005603935334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57596146-4	7.69698365399557	0	1.30337277880137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118012223-8	42.6539004220862	0.197966556050692	0.305283742418136	0.648467404397657	0.516682686522588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20709967477343	4.15746678260504
Merged-chr7-30909031-5	14.4412761345759	0	1.29198412900571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17917716-3	12.2488483780452	-1.34698933500702	0.595267430459485	-2.26283056334408	0.0236461360797939	0.213460566676236	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1498557592822	2.42512484922428
Merged-chr7-63934024-4	7.30771382092943	0	1.29027386465684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73177346-4	10.2437856765683	0	1.30199407901059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74759364-4	12.241072718394	0	1.30057448299591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41893901-2	3.43620843730356	0	1.33731307300638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52411415-4	10.6990087904921	0	1.31833444050387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37397593-6	13.7581649285991	0	1.28768543520179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43102791-8	28.5126366445992	-0.318744652429966	0.332336389379674	-0.959102471519661	0.337507125460394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95442380967134	4.68553447097632
Merged-chrX-166253323-5	15.7184836479629	0	1.28441184244486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122570642-8	43.4159680490941	-0.382307038529388	0.241263711039599	-1.58460232946777	0.113056715365792	0.679775866975803	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.15745284466912	5.78955842344246
Merged-chr2-4969289-8	23.1555241379563	-0.289574101861677	0.362997810866407	-0.797729609361881	0.425027417349741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41979650104797	3.7605338544829
Merged-chr5-41740032-5	18.9957639356174	-2.21405285078089	0.582980097224869	-3.79781893296244	0.000145974890544675	0.00427368960462917	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28237366695404	1.62306943957144
Merged-chr3-142521470-6	17.5830491043902	-1.12828098492625	0.577615858173089	-1.95334142745808	0.0507791516898745	0.375151435424142	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33739735156656	2.40848497238157
Merged-chr18-65555130-1	3.79370472112996	0	1.31411680776538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4341619-3	5.02266164555179	0	1.31137601063141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45325621-3	9.56287846188934	0	1.31349425020746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146798178-5	14.4633565102674	-1.20495635732533	0.625215364046737	-1.92726606960871	0.053946479834854	0.391643891932937	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19340318923314	1.77338015316878
Merged-chr1-185276053-1	2.79857155834563	-1.38682702585674	1.24911124388465	-1.11025101458842	0.266890875270615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53776636689114	0.581381506691384
Merged-chr8-54507911-4	6.99652771092304	0	1.31062702991892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38472961-2	16.2439948078661	0	1.32055837554305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-10729676-2	5.45968516566256	0	1.32195764156742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41367388-6	19.944916987336	-2.58413242437634	0.606150000061695	-4.26318967930929	2.01529307796649e-05	0.000884428082423093	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39166668033073	1.75733238011489
Merged-chr6-145340027-12	79.0389095467918	1.5772145315329	0.262985271868448	5.99734928244144	2.00564365995176e-09	4.58254512598629e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08590532407316	6.6685510151437
Merged-chr13-6906196-4	9.07146307326058	0	1.31105025723556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24361910-4	15.1398007368507	0	1.29778471542708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118581556-4	6.9417845382077	0	1.33515275278137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94565701-5	15.9921336393098	-1.45971711669535	0.665096592455563	-2.19474454275284	0.0281819276043237	0.244079024682854	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57109221589134	3.01583999335146
Merged-chr8-95149606-3	6.93455484194964	0	1.32814329965849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3712538-8	34.5636663773523	-2.51807399812204	0.517878890601529	-4.86228352578193	1.16039250980379e-06	9.0270248744808e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98071592170956	2.16430127775811
Merged-chr16-76763943-4	9.10465483507179	0	1.29693197253564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89098332-7	26.3621118477904	-0.209285557259764	0.388057330090271	-0.539316077887459	0.589668776813066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91676708904815	3.65301297345672
Merged-chr11-22809588-4	8.73079440106675	0	1.30337760837286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123953789-2	5.82018372895358	0	1.30364484609204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79878868-4	4.80605173559877	0	1.3274351437853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96237852-2	4.51181772921621	0	1.45768230776754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150891472-4	7.23864413385996	0	1.30476277162602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40713794-2	4.71437732909979	0	1.43946304311445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34109774-2	6.31543017269037	0	1.37959159875939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17427084-1	2.6747757765732	0	1.38910296044812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40783531-4	8.86662503395025	0.717670231406682	0.872077518303002	0.822943163129827	0.410540315576376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.942222610012176	1.34591112769102
Merged-chr15-59202465-8	61.0557307423038	0.643608552350292	0.293111965437518	2.19577713720967	0.0281078988534167	0.243624643123772	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14064083698049	4.89975038789804
Merged-chr3-88522041-6	12.9070648211128	0	1.29481739766749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68180256-4	9.53115895714949	-2.94636070658663	0.708418875652188	-4.15906578417202	3.19551866189947e-05	0.00127325830780782	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23472183726393	1.4217268527323
Merged-chr3-95174389-3	6.80256520131222	0	1.31084298698797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114358437-3	5.71619874081083	0	1.29457318992223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46742788-6	16.0270040562919	-1.79960568276944	0.670487456311244	-2.68402587674072	0.00727414758897291	0.0865191933653119	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30934654346514	0.793480537552656
Merged-chr19-53264001-3	4.5417919810009	0	1.32083361425865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41587165-3	9.22676017596768	0	1.29958888477056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72891689-3	6.45092294453655	0	1.30372796972675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35163878-7	34.4817523675142	-0.537755354562347	0.416712208559362	-1.29047180168167	0.196886896281162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65706096880361	3.76318007077575
Merged-chr17-44116172-4	18.6824002334032	-0.477963549912314	0.308238076720484	-1.55063110631118	0.120990113202997	0.714395946269362	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70427540442142	5.13566490869025
Merged-chr4-33284656-4	8.58782414404854	0	1.30048563164491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166694713-4	8.13704979504143	0	1.31067038248552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4741711-5	16.4198812526544	-2.52748051389931	0.550125101530261	-4.5943740921269	4.34050105528419e-06	0.000259738445017034	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89190380660001	2.03951848988522
Merged-chr15-98928808-5	11.7967352195844	0	1.28412160229177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68782631-5	12.5071595462736	0	1.30076219475135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52764267-8	29.9767026713793	-1.52478313237571	0.300131642704663	-5.08038112421266	3.76678387918247e-07	3.72945847528875e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7400907953851	4.27201997464636
Merged-chr5-141084483-4	7.17282192770192	0	1.28990660887474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144898192-7	13.0496803467908	0	1.32650011960796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65101462-4	8.47711744326638	0.66584329829971	0.694255782186678	0.959074904932765	0.337521011548885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81038315477295	1.92738623187092
Merged-chr18-36687899-6	17.4214511696706	-0.483994091742274	0.463943593021798	-1.04321753554108	0.29684755376704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9756532113618	4.30959206450071
Merged-chr5-125408139-2	5.2330569206614	0	1.30685529401306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70569811-4	14.302146310198	-1.94683908391512	0.566598101605849	-3.43601413135237	0.000590340179391531	0.0125207300754687	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11315243010611	2.67022672221125
Merged-chr2-170158271-5	14.2053432947044	0	1.28509907649784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41467999-2	3.39631249413823	0	1.42712153131233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120866230-6	21.3956464746979	0.00941558158324928	0.434786890168068	0.0216556243901689	0.982722662069297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28212155708225	2.72978091692342
Merged-chr5-139060597-3	7.58091084740553	0	1.34384256347126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41804096-3	7.29764557201448	0	1.35842465343053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121632090-6	46.7382267058914	0.670597010894617	0.437456467585061	1.53294569993807	0.125289234509707	0.731975888982681	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68130327739864	3.44384397960235
Merged-chr5-96860150-4	17.0434962168151	-2.21720063638613	0.427536899250038	-5.18598661372954	2.14874243956616e-07	2.32085493315521e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48337516107451	2.55462298584197
Merged-chr10-82962681-10	95.7125520778756	-0.884092840429025	0.178542264680995	-4.95172861175841	7.3557139414835e-07	6.27501936318774e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.14016666439479	6.2104207657039
Merged-chr6-43349115-2	7.10767197275913	0	1.31104018728346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59866795-7	55.41058621183	-0.125478906749201	0.285491257062919	-0.439519262481468	0.660285327784548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81372767908929	4.67936839002652
Merged-chr18-75455391-4	11.2330847956987	-3.85952004732426	0.943642361169118	-4.09002415124999	4.31328273336873e-05	0.00162158118869356	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4439042699523	0.683637474991079
Merged-chr8-126867745-8	53.9653786883839	0.234689626213268	0.332866803816657	0.705055666477739	0.480775594584527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44989271154506	4.60144996547189
Merged-chr19-32225307-3	5.73264992579863	0	1.30055746386818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125521376-3	7.12689496519633	0	1.3014889430041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75163715-3	15.3735740118369	1.17313508822019	0.459942242616524	2.5506139239276	0.0107533373022272	0.117270957835671	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44023830235905	3.90614682200132
Merged-chr8-79945671-2	5.05358481511883	0	1.33951510442442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43369359-2	5.81521856120386	0	1.30202716909539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94519169-4	12.9227916011162	0	1.30158342482963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148599662-4	7.1566274981761	0	1.31669287201476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4929457-4	7.70279191557737	0	1.29921115535141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115850134-4	7.03727131016763	0	1.2997928985527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80175204-4	8.12461048267174	0	1.3036943481999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30466008-8	38.9696463052174	-1.40421562302319	0.360165141255062	-3.89881046824781	9.66663998717333e-05	0.00307834433041827	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12149987613581	3.10346112363482
Merged-chr8-34908750-3	8.37431423330203	-0.565572786422966	0.666769317231287	-0.848228572921542	0.396310687469592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75916340146197	2.45916162824808
Merged-chr9-65357141-4	8.88492498862034	0	1.29056094686822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135677435-4	7.9456766822245	0	1.29399425512647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69527306-4	11.4798711404764	-2.06604482817356	0.643494824940604	-3.2106626939296	0.00132429280133671	0.0235667857832649	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00913297685268	1.82648481524113
Merged-chr14-66277163-5	12.622762307836	-0.219459322191966	0.731293476056704	-0.300097470273274	0.764102808760016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70958174916115	1.26501898168246
Merged-chr4-3607832-4	14.1364950342516	-0.411602189985746	0.439503561168482	-0.936516165856411	0.34900749320372	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55204571092611	2.58111491336869
Merged-chr4-20033489-4	10.5406413562644	0	1.29622919876609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56686087-3	9.05703414202664	0	1.35026448310034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122337610-3	7.66418992954033	0	1.29814571048817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67113538-3	5.55028752898383	0	1.33153361354729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170806366-3	7.24202862390007	0	1.30592544477884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80614333-4	8.49376369345643	0	1.29767106160332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75548089-4	8.01902793561128	0	1.29777666190504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46275501-4	6.17646851878386	0	1.29675089884183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105962826-6	21.513219778697	0.287987834327202	0.339648812074254	0.84789884165484	0.396494309708839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08986714704567	4.29106975859884
Merged-chr8-33855876-2	7.43312223806383	-1.46149534250723	0.873305252859748	-1.67352175853904	0.094224626794686	0.593236579875282	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58244519703017	2.41834317992225
Merged-chr12-101906027-4	9.96050737639014	0	1.31587625590233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135598096-4	8.60601278819541	0	1.29538375603171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5688550-8	52.1030757640254	-0.264705496529664	0.324407970076253	-0.815964837323337	0.414520246979614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27160890367909	3.80133253917827
Merged-chr4-47319699-3	9.02853226032343	0	1.28895813614863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57786229-5	20.1797318273979	3.58769889943162	0.863922454037476	4.15280200516237	3.28428887212445e-05	0.00130385869160294	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	3.37172738360265
Merged-chr8-85559381-6	21.9301050457221	1.36097842769056	0.339699141037845	4.00642292922058	6.16452273469759e-05	0.00215877225413477	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62650880087199	4.92639998548237
Merged-chr3-89378560-4	9.76819540933925	0	1.29850489923185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102043213-1	2.74260728991872	0	1.41758594672295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182045386-4	10.5790859103307	0	1.28372193222315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116478160-1	3.57749808736999	0	1.37937947277255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15815386-1	4.14343706975393	0	1.36403647361163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80161882-4	10.906453263246	0	1.286503282454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88248333-1	7.53838745538689	1.46162754169474	0.590707294298364	2.47436853379447	0.0133471934142753	0.137545064368604	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42324086697414	3.82902491979391
Merged-chr2-128747708-6	38.0629679827865	1.38337933553209	0.42238729719759	3.27514426856675	0.00105608026374981	0.0198420001968734	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38437939349036	3.74749432989733
Merged-chr10-122820987-1	1.49785716579832	0	1.55710145077126	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95566536-4	8.65131548586264	0	1.29340133686215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119443635-2	3.47373978811289	0	1.35291629895823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43767079-3	8.16590522600708	0	1.28972011503738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59032292-2	4.25405981838002	0	1.32967737650404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59579866-1	2.22039923340386	0	1.45266450282083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33406841-1	2.547605517355	0	1.45091504720341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73592919-2	2.76569014611196	0	1.3917922080306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-28516261-1	2.62624708496186	0	1.36911977176813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80707193-2	3.39255533131215	0	1.34773908715511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40464032-3	6.67972115918959	0	1.32637443972677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20934899-4	10.4023722427398	0	1.28854783574968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86169249-4	11.730844744597	-4.21290686260236	0.830153630121427	-5.07485206320923	3.87797591169702e-07	3.82390929753155e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84524389488417	0.683637474991079
Merged-chr15-25900765-2	4.89036063013653	0	1.31024949245213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34635841-8	50.9738747395245	-2.06944613401715	0.345159950163864	-5.99561488241811	2.02716923422133e-09	4.61558887733196e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61056999018199	4.46068288964695
Merged-chr2-43862873-4	7.69217116695495	0	1.3058048511628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40563711-10	52.7998071490739	-1.12728888564967	0.279776991421332	-4.02924086045383	5.59572624235553e-05	0.0019905189277788	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91613785589447	4.7896430168175
Merged-chr9-35060098-4	6.81726453486675	0	1.31344767599495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64376037-4	13.0712487755723	0	1.28218666748486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105557745-6	21.7530809109899	0.177994204991858	0.445416993266104	0.39961251519993	0.689441937054216	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49549211723218	3.54431388502496
Merged-chr16-92019563-4	8.29448854645631	0	1.30653574288187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83879448-8	34.3370353173523	0.370040276324533	0.355499481952705	1.04090243477138	0.297920831615773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94283123000715	5.33421814697478
Merged-chr5-62763158-4	14.8235536462351	2.59331663301243	0.691519517305715	3.75017127949831	0.000176713824360664	0.00496882167240616	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857370518835178	3.14637975729418
Merged-chr14-103020943-3	6.19198726452198	0	1.33365422574538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50113109-8	33.792852896736	-0.050412736654726	0.231924848407631	-0.217366690119036	0.827922588033861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67449356402856	5.60345545337438
Merged-chr3-115692623-7	32.675919755514	-0.207786782742165	0.351875293308932	-0.590512567075111	0.554847062978982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92276717199359	4.68749834555515
Merged-chr4-136070142-3	10.1317421669472	0.156067515639445	0.770211978859378	0.202629301962517	0.839424785423548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33315737954712	1.34557707159302
Merged-chr6-124311717-5	15.1501014205348	-3.52907653622861	0.7614024342076	-4.6349688123881	3.56991298275891e-06	0.000223020586779506	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57108116991363	1.04220233489076
Merged-chr2-127079665-8	27.0931083190308	-0.0348574322980205	0.325903403749163	-0.106956330915921	0.914823623836329	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85408040130233	4.83565592555611
Merged-chr5-65986616-3	6.75065916849372	0	1.33072208521947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136088045-3	7.03954823309942	0	1.33788040727705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18890481-3	6.00520544268464	0	1.32580249141998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63368785-3	6.19170737099023	0	1.30616731426781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118706359-11	50.0457170778329	1.35168278272523	0.255980803320985	5.28040683203225	1.28897355805099e-07	1.53423071264845e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49219932934928	6.12103082844023
Merged-chr5-100526347-5	28.9877358211164	1.72659367686702	0.450074935217242	3.83623601708375	0.000124934350086613	0.00377436895088293	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14904931755963	3.83934070333818
Merged-chr10-36917077-5	22.4054274105752	0	1.29519642100465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46842458-8	30.4222371619754	0.596260869639266	0.370093510828013	1.61110868522187	0.107156035681184	0.653924010797783	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69950611248104	5.24733232649943
Merged-chr2-33436451-4	8.66102723750912	0	1.29829617642923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75964635-4	6.05985701407955	0	1.30721764054185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71562961-4	10.5538298260215	1.33189832728128	0.695384343356851	1.91534126415871	0.0554489964201862	0.400058762280086	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53995249535664	2.22017310661124
Merged-chr4-66842373-3	7.39981369809118	0	1.30632756451327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65698994-3	12.2731151416896	0	1.29183138621131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90876234-4	5.42823355883971	0.109871226171028	1.34475071748712	0.0817037869861409	0.934882266851304	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr18-70553077-4	50.575010941897	-3.4828545476753	0.344847363630064	-10.0996989248018	5.54120472247829e-24	1.20698521265022e-19	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.56962228952477	4.10755303700143
Merged-chr5-88961567-3	11.841491822028	-1.27275765502859	1.19124214205384	-1.06842900372397	0.285327039730561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.834140948310034	0.423054662900563
Merged-chr11-74826300-7	23.6401433771035	-0.0711918539285225	0.335389534595209	-0.212266175849661	0.831899381907401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75084696506262	4.71108289404269
Merged-chr6-15793728-4	8.66133264713015	0	1.29617808107406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49292125-4	8.71909940379886	0	1.30290392435475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36711456-4	8.89496038041063	0	1.29381588966394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17989346-7	21.0482088277977	-0.879724471011207	0.406166198045679	-2.16592241118073	0.0303171164274807	0.258644194349459	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36501791518469	3.1920917418009
Merged-chr2-116999017-5	35.5873156682006	-3.89362971371863	0.536803795190489	-7.25335727616632	4.06565767952575e-13	3.32093083407862e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1595078203096	2.42194161705889
Merged-chr2-160136980-4	9.36045098176722	0	1.29731809450342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5710107-1	3.3772272635047	0	1.34061553981706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34380765-4	9.47442592441857	0	1.28799236426843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44267150-5	19.2115462915761	0.196347831228892	0.477289837487553	0.411380707920505	0.680793397797866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26474223723908	3.46098692661536
Merged-chr19-11989551-8	24.2560654995676	0.243702132087048	0.359112207888326	0.678623914013062	0.49737618654982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10731935866229	4.54342238895105
Merged-chr3-144628331-3	7.42761199073773	0	1.30070193163493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34976641-4	6.23585835118751	0	1.31570296693158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27778021-4	8.30018077138964	0	1.30183279226325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33492052-2	8.61706373892512	-0.135624038124467	1.02428166523054	-0.132408928840819	0.894660852666551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.986465049575574	0.683637474991079
Merged-chr7-109666931-2	6.52212817875898	0	1.33734452411587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138341884-2	5.58491090838692	0	1.29816503506724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45386921-3	11.3799235501556	-3.49092819880713	0.760185944248785	-4.59220303297881	4.38591359982033e-06	0.000261284134013689	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70782312692721	1.15307255889252
Merged-chr5-125189693-6	16.1600996726795	-1.45445347127694	0.522143477836172	-2.78554369251987	0.00534380376590519	0.0685370364841689	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89271292518434	2.15258675016244
Merged-chr13-23729217-11	58.2160225561652	0.553862322755727	0.277243377899918	1.99774770799274	0.0457440191309781	0.347418488392944	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71801676955856	6.29364835320265
Merged-chr4-136125638-13	68.3754011209479	0.745055250315171	0.201602933475167	3.69565679165549	0.000219319080548101	0.00586880615786086	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4549606345594	6.25412201546992
Merged-chr1-128642370-8	35.6718581755851	0.402560796240345	0.32455031692393	1.24036482248976	0.214840486110729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41563932528031	4.91863672706533
Merged-chr1-57392675-8	21.607615881328	0.393730877855511	0.341925964200009	1.15150915426007	0.249522831387415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12138214025878	4.41504516829582
Merged-chr8-40410639-3	7.89777370050216	-3.6582962107536	0.929067352001574	-3.93760065174198	8.23004140060135e-05	0.00271732740874583	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31752505574688	0.733321818366247
Merged-chr14-50838303-14	65.4759132862547	0.772832480977834	0.232587576312605	3.32275907952677	0.00089131858737986	0.017391491314101	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85456287024191	5.6541877593317
Merged-chr11-5730109-4	15.8405078840356	-1.25934709216011	0.462030388982946	-2.72568021971947	0.006416913436245	0.0788978757736496	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97464790121994	2.97123419362971
Merged-chr7-126554208-2	5.86269752318607	0	1.31246291763946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149689969-8	75.0226737369449	0.0334801175702009	0.245629004873212	0.136303599762099	0.891581278246458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.03038056789759	7.05600063242571
Merged-chr6-34216968-6	12.8987008569033	0	1.29819128636068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3770838-12	47.4090294050378	-0.710514885159304	0.334426784936729	-2.12457529469037	0.0336220671400537	0.279276420405993	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27217728399759	4.46408969234719
Merged-chr8-120818266-4	9.82369052706968	0	1.29845279648976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35799472-8	40.7886053054848	0.34950150647369	0.299004883003031	1.16888227029439	0.24245106769896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43224982512875	4.78312351964104
Merged-chr11-120034998-5	19.0321617153675	0.427708125606961	0.564506699909569	0.75766704925819	0.448650329803124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2405921065917	2.60666171676197
Merged-chr5-28004637-8	32.5855411598253	0.498445483387138	0.381709188572861	1.30582521539691	0.191612003025888	0.987544597344402	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50610093555078	5.17677491856976
Merged-chr17-26955765-1	2.43264847206342	0	1.33828967814754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64380588-2	6.29594479302263	0	1.30432835914731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85496955-3	7.75916358348063	0	1.29643281301763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91701996-4	13.3884269593664	0	1.30042340115284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157553259-8	23.7612066076355	0.88144394127639	0.389677527995408	2.26198299350426	0.0236984540440984	0.213717799884854	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12622574800718	4.99114422482841
Merged-chr11-113544375-1	2.96726613605296	0	1.3391946387201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106836375-4	16.532375535423	0	1.30077829898649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12781376-4	7.92729143577463	0	1.31252925634467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37400521-4	10.5772441928994	0	1.29474328811262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75363970-2	3.68695153706402	0	1.3652518093079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6388724-4	5.04352453301349	0	1.31478544013276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120518303-4	8.80261070027088	0	1.29458277693689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105731819-33	133.41485962518	-0.34000329992848	0.187262520580465	-1.81565055770134	0.0694239928950356	0.472403767695375	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.83192110835054	6.47937191422009
Merged-chr8-123849541-3	7.62322721697656	-0.0726817973743975	0.675160666688653	-0.107651113224453	0.914272450053668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88372095916953	3.12295560242613
Merged-chr17-50025367-11	51.5362522321423	1.35071864022231	0.315762919487343	4.27763539308312	1.88889072368179e-05	0.000840241342612053	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56478750687465	4.85147589468991
Merged-chr1-131691996-5	26.1813564757747	-0.952897784326409	0.346270521364655	-2.75188826519517	0.00592527338581182	0.0741180923945749	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80925830604948	4.9070958358369
Merged-chr18-62985834-4	8.72216425656118	0	1.30055698856962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47889008-7	20.7464162870341	-0.374234722021472	0.461050128201086	-0.811700722178849	0.41696337986513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90876519519749	3.63292614061591
Merged-chr2-155309556-9	35.7227491122387	1.242792840563	0.299985814313136	4.14283869858503	3.4303321937791e-05	0.00135279714867042	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18609811773916	5.36188103991255
Merged-chr12-21347119-3	13.4046193422412	1.43931125697026	0.498774482751059	2.88569545304632	0.00390549874383553	0.054092564839906	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69513408442669	5.43710491849542
Merged-chr5-148634148-3	7.26974053622681	0	1.30705059409271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21052102-3	6.89661375519396	0	1.31497804300464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78300965-7	30.7220796908919	-1.30981712101387	0.361540133525978	-3.62288166527923	0.000291339126208732	0.00730539007722019	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82246560339331	4.10853101774513
Merged-chr15-6087421-4	8.37207483344105	0	1.2991177490802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90305146-4	9.58079362707964	2.46995264705264	1.18491270471331	2.08450178416329	0.0371145481017602	0.299013597533277	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr1-36277456-2	4.69833320622795	0	1.35336475765701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14224552-2	4.12029912102425	0	1.34997076756787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73640711-2	3.5416126551711	0	1.32289209486081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8998516-2	3.41483083676058	0	1.33842207072736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43372365-1	5.09702923800836	0.669818686478642	0.611302198821086	1.09572432059038	0.273199436123473	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72233766991639	2.73345423903748
Merged-chr8-126692401-1	2.338731763749	0	1.41372774149221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43383741-4	12.5463512151314	0	1.30400131405979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35098997-3	16.3855610902849	0	1.31101763541604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63385451-3	6.08803891649143	0	1.3127102060875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128558170-6	41.1951492012615	0.0313970258849692	0.323660272329222	0.0970061158850926	0.922721537584566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60478417790781	6.63824670899578
Merged-chr14-98817214-3	9.39649047846623	0	1.31020793274974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73321284-1	2.99056853501315	0	1.32536883779606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21389671-3	13.9547202760013	4.01254026627783	1.08410583079962	3.70124405964889	0.000214544991985502	0.00577178141057415	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.85717356975375
Merged-chr1-95598300-4	7.25989441939517	0	1.29613892572067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50479855-3	4.28313426570373	0	1.3366939296884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140821704-1	1.97557901850099	0	1.52377084601689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12760406-4	7.05516870675505	0	1.30332230352515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20211942-8	32.2472297738228	-0.927817430395045	0.382938320628641	-2.42289000712156	0.0153975879744192	0.152867028832634	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61937234664194	3.6828465559522
Merged-chr6-125084586-4	9.98214974129601	0	1.29014176576498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121372095-6	24.9949400177816	0.633963709225504	0.403687273904301	1.57043273396771	0.116314472052818	0.694126528836844	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37201463677325	3.88281971728502
Merged-chr9-57862091-4	7.89890229727126	0	1.29359340329034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30772084-4	8.36978465272284	0	1.28789487599463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107989114-4	9.37000915984457	0	1.28426833109037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53735762-4	7.42816050825849	0	1.29108983953133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72785992-2	5.8878426714445	0	1.30572321780071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120826503-5	72.7345400987631	-0.0209488763323541	0.185521234885258	-0.112919021616639	0.910094755712509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.28542367565713	7.24319316413558
Merged-chr10-111516340-5	51.0590319890054	0	1.27497417683709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105421233-2	9.50450659093805	-1.58271617286097	0.489499527502102	-3.23333544556725	0.00122353801750925	0.0221784508438722	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21898975761936	2.23192622730314
Merged-chr6-82752845-7	51.224010180564	-1.97245253018942	0.314255300285102	-6.27659272063177	3.4607304118589e-10	1.03736187840978e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.59958404402027	4.44368195400783
Merged-chr12-84034211-4	9.50983354387501	0	1.28752836501807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117874176-4	6.83633383374234	0	1.31308228361926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60642807-2	13.1299419596182	-1.40668960790943	0.525536109918102	-2.67667545837838	0.00743566213863269	0.0879758787092326	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92957318800774	2.38971150924877
Merged-chr3-136265509-1	11.0053291384657	-1.5356639296507	0.778922388307902	-1.97152367514652	0.0486640077281515	0.363760952757239	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14805240497433	3.11914669500137
Merged-chr11-116784399-6	32.9181262291929	1.72217199767186	0.339198035445194	5.07718741770284	3.83062976578956e-07	3.78693392852171e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66856631101091	6.49639497437023
Merged-chr2-17896192-4	6.04085994227849	0	1.3115352645576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62199154-4	9.04473212933435	0	1.3117214195033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78815981-8	28.6529536287191	0.451939632617531	0.418397389235771	1.08016838595247	0.280067203552688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32454435248214	3.86699401279623
Merged-chr17-26691424-4	8.37108023379051	0	1.29667696033862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12371332-4	7.77686007814237	0	1.31176194090201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123292991-4	12.9310215643034	-1.81925633754252	0.501260594295221	-3.62936236809203	0.000284122166945008	0.00716014158163845	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91939383821739	2.60723990317186
Merged-chr10-20893572-3	8.19553355649579	3.52637203158375	1.0877876266082	3.24178354793317	0.0011878420324444	0.0216757122178475	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.354969417986
Merged-chr12-17507350-6	32.6044063465148	-2.1915594817291	0.405207208223239	-5.40849085913029	6.3558030645371e-08	8.47604708276002e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69375570228501	3.55276323848256
Merged-chr12-73693567-3	7.46327595191524	0	1.29951519183105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69920351-9	51.4289320637945	0.538947117461255	0.314304109265865	1.71473137503706	0.0863944884222377	0.555225633402788	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42144386720604	5.08072516701012
Merged-chr14-47654382-3	13.6343346222012	-6.34092287656166	1.02254143297231	-6.20114028839883	5.60555173075501e-10	1.58571594544553e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10304225800551	0
Merged-chr14-50865102-6	13.998991355771	-0.421022911441691	0.547676149953729	-0.768744287070491	0.44204512845262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56070259572838	2.20751823872416
Merged-chr2-21186760-7	20.2169818685466	0	1.28033816879378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9118028-1	1.94179763063071	0	1.53115022059082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39655204-1	4.5609882833213	0.753447177361172	0.812314995894033	0.927530799221463	0.353651008304111	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10782353562974	3.20642815764035
Merged-chr1-120532753-5	44.3503077188579	-0.305445609016556	0.584461783538302	-0.522610062145387	0.601245636889027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63412118422684	1.486851288245
Merged-chr3-97994243-5	16.368182552264	0	1.28482807173427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120044912-5	14.2518367745078	-0.808785452882121	0.489424410184864	-1.65252373206443	0.0984278313094021	0.613317923595326	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02418223337079	2.83018307122232
Merged-chr2-79628810-1	2.94218451072077	0.545361971455113	0.859574236476977	0.63445592982209	0.525783318911942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71724496340456	2.43282905033915
Merged-chrX-167196547-3	10.5900237105741	0	1.30116813749263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159200314-3	8.47912213882841	0	1.29950788451028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13478550-1	1.83305809468751	0	1.58673070519686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158159756-1	5.5013824006349	0	1.31465260136795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89481923-3	10.6369129878456	0	1.33930695636591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27758571-3	13.4784864725563	0	1.30884297853475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123594791-1	1.15745721663493	0	1.82861441675191	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67146883-4	8.28158432805325	0	1.30749434643653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137387149-4	7.78943884329608	0	1.30276693341575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118366434-5	29.0400758893335	0.847849049353419	0.42519323630761	1.99403230567862	0.0461485241520853	0.349515699958526	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52839527612798	6.17636178001858
Merged-chr9-70841202-4	6.41403059009315	0	1.29304482676665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68130122-4	9.13652229703708	0	1.3009904450139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97858587-3	5.64322779958154	0	1.30895352491895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118381568-4	5.7676655002313	0	1.32339694370738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69062916-4	20.4811829020836	0	1.28532793215312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75065506-4	7.43265104137305	0	1.29289334210818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5772648-5	17.1009145942898	-0.37637867498964	0.501026034649202	-0.751215803093277	0.452522791040386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72191034385714	3.28793351827533
Merged-chr1-85809450-2	4.41707286008018	0	1.32470583861113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94518349-3	5.90761256760044	0	1.3217874829772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174038749-9	41.4722117139838	-1.67961781411911	0.336594567505564	-4.99003244932451	6.0369150528903e-07	5.38918375746133e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0441585412455	4.2048967316213
Merged-chr1-163975307-4	7.03026621919954	0	1.30342348053134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88099054-4	9.34887991110805	0	1.30199327428731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132030254-2	3.80614806033507	0	1.34366177394639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42001822-7	30.5639503892155	-0.723122728926462	0.356101131527429	-2.030666754202	0.0422888110364047	0.328754361501088	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52838473581367	3.66174507259657
Merged-chr9-15010475-4	10.4129319286633	0	1.29559145722197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37957407-3	7.94199145081441	0	1.29037346684856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4210232-2	4.75356662774056	0	1.31901279345041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65328128-4	7.16056732853272	0	1.29228773696565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-28414221-1	2.83600978644472	0	1.42877838458415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67767833-4	9.44122885251613	-3.17534791390819	1.03646350899986	-3.06363696004335	0.00218664087736567	0.0347068823833707	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59662761508517	0
Merged-chr14-70880269-4	8.85750778309006	0	1.29745042278973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155901512-6	22.0693204599699	0.55954384913365	0.407300638989049	1.37378583672857	0.169508179395809	0.90414508944564	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30172342197153	3.68191247749185
Merged-chr5-146824841-8	38.7082076369729	-0.297223162407671	0.293567650018708	-1.01245202728819	0.311321973049256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99438423809841	4.73724027855386
Merged-chr4-133170321-5	30.3508973365828	3.04734843753399	0.687553522648727	4.43216176944946	9.32929789810856e-06	0.000477768260540597	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.75261347666835	3.40329553716061
Merged-chr11-5502528-5	14.8491575951762	1.93344771169218	0.557360701370286	3.46893440269246	0.000522527019801931	0.0113551881064107	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45703941574831	3.67101604500442
Merged-chr3-149098916-1	6.20885573789109	-1.73250510567205	0.890145032500611	-1.94631778240121	0.0516165788303427	0.37936530876702	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38541046638617	1.15637648126681
Merged-chr17-34301339-5	35.3101363410788	-0.950573117551307	0.386950045486131	-2.45657838431596	0.0140267198319325	0.142460372107159	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68131058712716	5.78967693449891
Merged-chr11-40714071-1	4.89513678928442	0	1.35029696730506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78895862-4	7.17729065927275	0	1.31995239602812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20943704-3	11.9752184193309	0	1.2840066531606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81136159-3	9.26108847184194	0	1.29444699200041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-13301279-3	13.9171788105611	0.729304395748648	0.602178840247292	1.21110930342413	0.225853516268338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08732333919993	3.10367374031469
Merged-chr14-117778737-4	6.70008679032419	0	1.31755856799865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123027938-8	33.2568391278372	0.83145453898052	0.360752348464787	2.30477928284832	0.0211789379531041	0.195723218707897	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00403431057031	4.89360987879412
Merged-chr5-36554012-8	28.1385556833177	0.493185064998612	0.291864007850127	1.68977692258603	0.0910706404299624	0.577833000246269	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00969780431259	5.54247018717787
Merged-chr8-126929763-4	20.037902771517	0	1.28828151720373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132151794-4	8.42346018391401	0	1.34562463101799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167477197-4	6.790162131318	0	1.29284553370281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90312520-3	8.41020535226804	0	1.3054931108596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80083434-4	7.27604400879807	0	1.3093655435918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51939888-4	10.0624744096409	0.208213191674487	0.608617246885094	0.342108595739149	0.732269168869031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93504111393616	2.15258675016244
Merged-chr2-163951918-4	9.01024893214568	0	1.2920020528979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38981496-4	8.27937911566462	0	1.31059965401637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51498508-4	8.90534864251812	0	1.29486045360827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148559627-6	26.2338812594868	2.98648539062264	0.421561598784528	7.0843392738652	1.39709252781803e-12	8.86353478862105e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10262295077284	5.04668890300734
Merged-chr7-102246014-4	11.1758823883305	0.184078498938123	0.668441281730073	0.275384695663451	0.783020700797664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03015253509923	1.486851288245
Merged-chr8-3288744-4	7.17386043062946	0	1.29192874994707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156679773-3	10.9721066555095	-1.22025213133531	0.582940851652601	-2.09326920197129	0.0363251302908617	0.294477375149906	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25095211931922	3.87821054373462
Merged-chr18-62037784-5	12.3449479953428	1.30873578507292	0.527554467412182	2.48075955359202	0.0131102776331215	0.13579080713488	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90011625938117	2.75921435372
Merged-chr7-13302962-2	6.08595033895024	-1.47581773325057	1.02469793333387	-1.44024661828776	0.149797638228369	0.82835545973352	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92218918156598	0.581381506691384
Merged-chr10-59590053-4	6.88090199446535	0	1.29383400101015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93566372-2	7.9535530119063	-1.28574212145654	0.816740402862996	-1.57423597136802	0.115432906109749	0.689810579117298	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10841409344392	0.666688015277142
Merged-chrY-90807774-1	3.25935146596798	0	1.33379542241927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27342806-3	11.7462273062617	-2.43835535937242	0.850217981949204	-2.8679178882835	0.0041318275150357	0.056343572787463	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00904821809694	0.918668513615376
Merged-chr9-45102805-1	2.49228618780607	0	1.36546392597887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61688475-4	7.16896883076918	0	1.29228687716179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67590462-2	5.58175739432585	0	1.32996719643384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120052850-2	4.52486482427336	0	1.3231276856112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74773697-2	3.97151456868647	-4.98405962219354	1.14806097210642	-4.34128477780146	1.41651987437872e-05	0.000668814362074796	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57699910150597	0
Merged-chr4-39611247-2	6.05183207207113	-1.37071306193339	1.18247216443675	-1.15919266698874	0.246377659833559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29263445103863	0.423054662900563
Merged-chr7-38167932-5	21.3647740180615	1.05678578797277	0.409299844539331	2.58193547364325	0.0098247952537484	0.109502144064718	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99318004729228	4.05057594071363
Merged-chr2-18816230-4	6.84500859284953	0	1.31846647742498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57514553-3	4.36292752679437	0	1.31964629820967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102967668-8	31.1521811866627	-0.285581238608606	0.342684725901333	-0.833364363869639	0.404639266400126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38514355649024	3.996389139505
Merged-chr11-106388084-4	10.953668350575	0	1.28652511503051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30770654-6	31.6620124422061	-0.337862393287828	0.396702163268032	-0.851677718378236	0.394392990748445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59310038808107	2.75966928056023
Merged-chr3-69634220-8	41.3022003645178	0.378343931335782	0.266331145968799	1.42057711635464	0.155439735007961	0.850700579885278	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53719312777991	4.90958988880437
Merged-chr14-77239638-1	7.42504805120205	-2.4784715264044	1.01778642558153	-2.43515875640441	0.0148852573048892	0.148706929192064	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68399537733961	0.563523181795778
Merged-chr15-67714436-8	44.5867561155647	-1.60565102860783	0.349575461041704	-4.59314570829182	4.36613980349155e-06	0.000260556869040145	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.06176669744092	4.42637386073877
Merged-chr4-32373349-6	21.8447211976683	0.594475455451658	0.554374878827014	1.07233476507718	0.283569697126712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42086270651565	3.13302836160732
Merged-chr12-85380486-4	10.0234983794848	0	1.2982033447322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10841317-4	11.6445219944333	0	1.28478621138213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3786943-5	35.4840942931625	-3.67094490410316	0.514527893959709	-7.1345887117067	9.70769896992573e-13	6.74654399379512e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92914202337011	2.08628700317133
Merged-chr4-139156690-7	39.953461872744	2.10320051167197	0.252953859043791	8.31456187156991	9.2091848796598e-17	2.31455151979327e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71260835528336	6.75652736903301
Merged-chr5-100557196-5	22.4433370890381	1.08592268460559	0.478589605594297	2.26900599576776	0.0232679612583779	0.211025704057348	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51912671033798	2.96346561769893
Merged-chr13-43791430-4	9.49915462227713	0	1.30945685169658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123411317-2	6.92091231970768	0	1.32120862905762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120165265-5	25.6519329080479	2.01563213913517	0.490433467047112	4.10989925151569	3.95831778897152e-05	0.0015197428568633	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83730690865672	3.90952271120354
Merged-chr15-78588758-2	8.88978995714521	-0.690553058073889	0.53193172388817	-1.29819867299185	0.194219074016919	0.996814295531697	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62243272783088	2.48211543439749
Merged-chr8-108631299-1	3.02973719459939	0	1.35040557744014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43326874-5	21.6350257556492	0.324099067106382	0.465551260873618	0.696161936063072	0.486327422367589	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79162175533858	2.63882497122968
Merged-chr9-21011188-2	4.03587966713817	0	1.34847842170023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160627406-4	9.31850259437643	0	1.29381117676477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36244890-4	18.7025098802435	0	1.30340000315116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3169645-2	7.92085464712959	0	1.35297974346253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16634160-2	6.39523319244399	0.121704924813301	0.699673352070875	0.173945348144362	0.861908413172149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57359077021419	3.21482264138291
Merged-chr17-48270036-4	7.86902559931386	0	1.28871707026179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-158077597-4	9.25740240840585	0	1.29534216084124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98966877-4	10.8653462577832	0	1.28751281724667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57427753-2	4.13768581748361	0	1.33669520800404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100860856-8	43.440260401017	-1.01442252052406	0.271013440108247	-3.74307089758678	0.000181784910863217	0.00506779726333949	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1660441632775	5.11449673454221
Merged-chr3-146328165-8	29.9029580838777	0.262093250412682	0.339094947123631	0.772919952467251	0.439569755689195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10199353877868	5.2834580992779
Merged-chr8-122160315-3	6.50314560222738	-1.9173675319843	0.682618812052991	-2.80884074410106	0.00497202353444015	0.0648636154684619	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78662511903344	1.93871841517079
Merged-chr9-20998496-2	5.69132788726827	0	1.31000240565877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111071256-4	17.6862585068858	0	1.30803784472805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121422074-3	5.69070084658834	0	1.33240738114152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81113054-9	36.5864198180066	0.960296784343512	0.27638501301633	3.47448935042933	0.000511826680248273	0.0111784178634705	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85262621504253	5.78328331929153
Merged-chr16-10996659-4	11.9151811518763	0	1.29642032203818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93268516-5	33.1618499146833	2.07512410263607	0.489138310960617	4.24240763018693	2.21134567125871e-05	0.000950674962066262	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79207054179924	3.98371373657391
Merged-chr2-84523560-5	12.8785517411718	3.39179529094518	1.04442168419412	3.24753434582535	0.00116409613387545	0.0213497125916995	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr2-122569668-6	26.8274626294248	0.123271777803515	0.28363629937879	0.434612135588784	0.663843984830286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10537096783651	5.23079634158238
Merged-chr18-75909383-4	15.4729104795567	-2.83124542860768	0.637295721606178	-4.44259286955839	8.88812496372527e-06	0.000459496371740183	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5547081180565	1.40918939303534
Merged-chr12-75720209-2	3.78423780184795	0	1.36067426891693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96620083-3	10.4293949291698	0	1.28990910147038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157008883-6	35.803816290111	-2.11544863921311	0.319899159777603	-6.61286087992164	3.76962693582531e-11	1.61000027286563e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.36244675433928	4.26753240228694
Merged-chr12-102495701-3	7.28952832529313	-1.01911357721928	1.06318362985984	-0.958548973664719	0.337786008683735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22162999492511	0.581381506691384
Merged-chr9-42141841-7	28.4735904884802	0.00142815167197795	0.335311091449688	0.00425918410811723	0.996601673033162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17873298148129	4.15682565434048
Merged-chr17-10335116-4	10.682678331961	0	1.29659083688409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14381795-1	3.11307179896525	0	1.34580287751769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134671026-4	9.69722488160791	-1.73835464253927	1.14368199287559	-1.51996328819385	0.128520202646882	0.744132656580112	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857496028466807	0
Merged-chr7-100502758-1	3.29858395916326	0	1.41773045869157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116631120-3	10.907066643439	0	1.30679063201133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117409489-1	5.88847744552738	1.06322579549731	0.733097794925748	1.45031918368408	0.146969531891048	0.816725149328382	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33713594645036	2.93176770640726
Merged-chrX-106623832-1	3.26586572599238	0	1.40485163223531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17741679-4	9.7064672114176	0	1.30403121442957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54054363-4	6.02784149754286	0	1.35224300564848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34723148-11	63.0689459331103	-0.338710727046337	0.26971234328612	-1.25582212115158	0.209180469428638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78277452508391	5.45043743559015
Merged-chr6-134068598-8	23.3885452275602	0.360705680731128	0.329783777883103	1.09376417192657	0.274058421411522	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22657064911031	4.55122192043022
Merged-chr1-171637370-14	73.821977303767	-0.246298788651611	0.215482960368101	-1.14300819067488	0.253035190377637	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93474698028185	5.72608003272919
Merged-chr4-128785117-3	7.99923887441774	0	1.29305091273119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86584590-4	12.2496365578791	0	1.28496080000251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18899244-5	18.5315228340674	0	1.28322184433881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124279624-1	3.58115024173156	0	1.34865398179963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191087142-4	12.1533811918311	2.49556031722018	0.693037990015063	3.6008997387949	0.000317117857999528	0.00780419376740437	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.700451271595348	2.66067886431113
Merged-chr10-5288482-4	12.2221388387296	0	1.28753054693946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106047418-2	6.77921875795856	0	1.29142840827571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106140995-4	12.1190207865195	0	1.28954408264723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43206853-2	4.44562418064564	0	1.3233497195076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132610905-7	38.7210629393439	-1.2816704686341	0.356981056729101	-3.5903038675991	0.000330292685195613	0.00806551039117806	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22316174743237	4.00235255390206
Merged-chr10-13686251-7	39.2215557202233	-1.21955242335777	0.298338169943669	-4.0878189458226	4.35447778945547e-05	0.00163251695714146	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03393800860781	4.78012349622442
Merged-chr2-168478100-4	11.6484553993326	-0.273899058013332	0.333122746126494	-0.822216618943596	0.410953621933809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90112089119924	4.6175563688136
Merged-chr17-26534078-10	94.6705980613977	1.15887598300746	0.274588736533422	4.22040611584372	2.43862601804108e-05	0.00103075327150655	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40725986099292	5.45276447291334
Merged-chr6-146222872-3	8.37924924978843	0	1.29966966653122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70797181-5	17.6369108733862	-2.05033388520771	0.592653918565338	-3.45958040768724	0.000541017719252783	0.0116851334467491	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61045435879202	1.85502169613206
Merged-chr1-80630457-4	7.60230304846104	0	1.29731857659837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12500764-4	9.68084981577281	0	1.29009109847583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116683934-3	5.31058315869588	0	1.30589219721344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128716177-2	5.42491886545544	0	1.34367053869656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108068117-2	6.22699598001929	0	1.32104910968617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87676448-2	4.06503323781635	0	1.36104560135976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58672170-8	27.8177271049813	-0.395929404441218	0.336717792248465	-1.17584937165738	0.239655073189859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66377373601631	4.16308914338844
Merged-chr11-120071263-4	12.5253720171506	0	1.30488058446121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17919251-3	12.4611047509645	0	1.31672644592823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84606728-5	14.3943577226974	-1.55595138788415	0.672824728266172	-2.31256569878718	0.020746529256158	0.192817906524378	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75128586357478	1.41695929335733
Merged-chr10-8362286-4	13.7803194372127	0	1.30557515064892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93168217-8	24.5687260935249	0.293392337549809	0.39236062751255	0.747761923539142	0.454603772751986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28887741161379	4.28585630814522
Merged-chr1-151583700-2	3.70483918148093	0	1.33033122749041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96658970-4	9.28947250236993	0	1.28910633376194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78235904-4	9.06701481952269	0	1.32512597553845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34776977-4	18.5243582405226	0	1.29729827763569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97942588-8	24.5986838350087	0.523175543888575	0.344732855238747	1.51762599919943	0.129108708779411	0.746649714319547	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38911495790349	4.89384765959831
Merged-chr11-76479624-19	118.118125098692	0.115800256157119	0.163819436230301	0.706877393927327	0.479642673411255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.72607908965726	6.84503881597158
Merged-chr18-38003394-6	30.0506776476512	-2.20388141240351	0.400091417931705	-5.50844460447715	3.62018124351016e-08	5.25698585640923e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58764564820766	3.52511964756407
Merged-chr1-159187014-10	79.3682091767756	1.01986605667817	0.220858594943428	4.61773315609202	3.87954677965863e-06	0.00023759406172781	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08544374754063	6.09012173955488
Merged-chr6-134263526-4	14.7103583690444	-1.37653831967011	0.622798250358095	-2.21024757034662	0.0270879851455442	0.236769860529793	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69812990834227	1.79911208219892
Merged-chr9-121904584-4	8.63833986169135	0	1.29830155482367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120957957-4	10.0137385407157	0	1.29392206922338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8981825-8	34.9785771388107	0.20511610177049	0.412299188395196	0.497493343532568	0.618841195791421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73978757585938	3.88778723693484
Merged-chr18-53250257-8	35.4898824924752	0.471017991304289	0.31269505345037	1.50631737249098	0.131985720535197	0.758630045357978	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29975053201352	4.6500458928975
Merged-chr2-155473920-7	25.4064817008332	-0.815514314264497	0.863117396602565	-0.944847499858715	0.344736737690485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22472102621539	1.13289677646175
Merged-chrX-17591036-1	2.70560205032362	0	1.46464523243164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19629812-1	2.49483335228399	0	1.39923235885162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31056749-2	6.97560387373898	-1.08454085860569	0.802579848073087	-1.35131832827546	0.176593483328411	0.931370279384857	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86016509254261	1.43750690265746
Merged-chr19-32782209-1	2.20508351230489	0	1.40836285230194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123376839-5	34.3865803885442	1.56222116341681	0.438612127869738	3.56173727116083	0.000368408954754946	0.00870041617543069	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49899946866408	4.108914230107
Merged-chr15-85645378-1	3.01900122415939	0	1.37539337125937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11746055-1	1.46446868573865	0	1.51198399691419	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191881368-2	2.25732491222207	0	1.47909281125726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57575021-2	2.70253886645386	0	1.50395541522143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70832228-1	3.81734659150863	0.438845800603007	1.05293104352303	0.416784938864239	0.676835719750263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67242933345089	2.87185071153905
Merged-chr8-61573504-1	5.93473859619569	-0.717955186753893	0.941611671759101	-0.762474816622252	0.445776667902673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7706580480822	1.65215194967867
Merged-chr4-128628361-1	1.78285377542147	0	1.49192197801343	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111159829-2	7.65213686568011	0	1.30010826219883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41038915-1	3.96816088971797	1.87746806416162	1.4788633372242	1.26953452486394	0.204250484979097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43152444367152	3.16887138725642
Merged-chr2-153773498-1	2.05512404781602	0	1.36097640828558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53170846-2	3.17478461177266	0	1.34723464709172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87256456-1	4.09395342083796	0	1.32205307158159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159619076-2	4.00775391558904	0	1.35882281728342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82741609-3	11.230374184346	-1.29176567165218	0.530164029795177	-2.43653963500926	0.0148285442951572	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11483796711957	2.53862250190241
Merged-chr18-67195119-2	8.48989860226038	-3.56837010482192	0.75693812540636	-4.71421637390276	2.42642720084369e-06	0.000162789847912045	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79700119849227	1.50282389800248
Merged-chr4-132620181-6	30.2511028993522	0.153350278088664	0.405012555608465	0.37863092381983	0.704961955108965	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04355744765753	3.49716289840511
Merged-chr7-122459752-3	5.6972572447181	0	1.30383506947762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59236129-3	10.1066911677774	0	1.30907975184331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76679168-2	9.27762180100066	-2.81727148791281	0.851164188424654	-3.309903689824	0.000933280778406425	0.0180646225550196	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53065644700035	1.11548603074465
Merged-chr9-90184657-3	14.6091915163328	-0.313750516074217	0.4370446909049	-0.71789115073014	0.472824404650676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02976954021506	3.83666162243557
Merged-chr10-30660775-4	7.41162682666323	0	1.29505060395966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84135548-6	13.5837477149193	-2.66623588608465	0.694868968148566	-3.83703404281913	0.000124529214837146	0.00376909961683565	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96886636937942	1.19454903376793
Merged-chr15-80634967-4	11.2505183217874	0	1.291770398064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171038574-2	6.9627505685932	0	1.29554611897827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108702839-7	22.1619081493845	0.872615490631853	0.371689909648985	2.34769755104713	0.0188898530303892	0.179232806174505	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83625987486575	4.96119499882663
Merged-chr11-76253332-5	17.695061310545	-0.394438830852743	0.44198911283643	-0.892417526579928	0.372169180323622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48345966500531	3.22399548585317
Merged-chr11-69409748-8	86.5048048791143	0.997614309929615	0.31688420853086	3.1481982474127	0.00164280237273936	0.0278330096056816	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96591844205296	4.94838387602066
Merged-chr10-83922233-2	4.42473703015594	0	1.33838363157843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105500477-3	4.91532431531088	0	1.34193837148252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39226720-4	7.6664442489827	0	1.29835772651315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54449056-4	10.8773803247027	0	1.29815510423396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38198887-3	4.81043912895263	0	1.39995794196469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69258533-4	7.1143523903207	0	1.2942516813368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6705763-4	12.4937715997447	0	1.28980474606727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-141066010-3	14.7840774187641	0	1.3324833746183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7906678-4	7.30605770262169	0	1.32594360448806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75820103-5	19.7016263156475	1.58658756746316	0.451299138253665	3.51560070245775	0.000438760327817761	0.00997067959332558	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06337264590081	3.85773820594073
Merged-chr5-104053155-4	6.48383314126342	0	1.31734007894875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23979719-8	31.0767387603998	-0.694956414677755	0.348748120906246	-1.99271730230936	0.0462924116620924	0.350483597783697	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34738319162181	3.88571446801982
Merged-chr1-171844284-8	47.6760522399158	-1.15763782166815	0.353846816065863	-3.27157902546359	0.00106948694359502	0.0200019158031368	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93598867004224	3.36433470102498
Merged-chr12-40459997-4	5.77135780014167	0	1.30563967334199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39851326-4	11.4890251519667	0	1.31519688635157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117978057-4	17.3083352867773	0	1.41854803433321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79327786-3	8.94789404830691	0	1.30358777923544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3187645-7	31.9145085745516	0	1.30553340427611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45308139-4	7.23477897685876	0	1.30428183602447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129315061-4	8.2287420623959	1.91469427126503	1.2107959853828	1.58135168466031	0.113797648116078	0.682911297069815	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.683637474991079
Merged-chr17-57109029-3	7.70722009638766	-1.55187158455374	0.958397381426231	-1.61923604407635	0.105396485499197	0.645972369727985	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13381102850702	1.21171060354126
Merged-chr14-51828032-1	5.66062245907593	-0.634597934959466	0.707353968519351	-0.897143386765498	0.36964240977786	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10753784237403	3.5421472809727
Merged-chr3-39269566-4	20.8298330920826	0.926951459083124	1.08523507757963	0.854148081124028	0.39302294604265	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.667447567553467	0.683637474991079
Merged-chr14-62120478-1	4.35260226777731	0	1.37455914084304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145871782-1	2.78488928796581	2.93897886159796	1.21718932190934	2.41456181770288	0.0157541493902131	0.155556156852957	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.35032549026822
Merged-chr14-14863944-3	8.118123769185	0	1.28906913086062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19104022-2	5.77039687050258	0	1.31765823552688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20469537-6	23.5083910145516	-3.17256617727242	0.552205354289915	-5.74526514932484	9.17770569059686e-09	1.63413176037532e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13551944019816	1.47158896970822
Merged-chr11-103406005-4	8.49775934091841	0	1.29285699475934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10554413-4	6.59690919137224	0	1.31783055651246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90894486-6	33.2319989124658	0.438588001439276	0.405636962519975	1.08123283123559	0.279593557255775	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36092009827104	3.63068143299972
Merged-chr2-121509779-4	7.40273227920854	0	1.28647179308658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27545221-4	7.95473748037334	0	1.30351056352031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-28188335-2	4.61784904659701	0	1.31018734363719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57995821-4	7.43869764800757	0	1.28862069724161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163736102-4	8.94440336201679	3.60413248418752	1.06512589106686	3.38376197068828	0.000714999605887428	0.0145597894192334	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.81534621159246
Merged-chr2-84460132-4	6.55619618163333	0	1.29631453844926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111115901-4	10.3506622382729	0	1.30103660987049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7924451-4	8.51493685057159	0	1.30378263663727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59612004-7	20.6044657034136	-0.788875580443332	0.448508243488394	-1.75888758321952	0.0785966045889814	0.518861080314705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7086752018159	3.05466924690411
Merged-chr3-81149313-7	33.5297384168014	0.235330815581252	0.342362348735091	0.687373528224461	0.491847374748608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24357202195	4.44349702423742
Merged-chr11-20937145-3	6.85531254137544	-1.03225822140523	0.690888316169388	-1.49410287776837	0.135148731941422	0.770227545564639	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28960647208505	2.89928934249206
Merged-chr10-26836823-4	13.9454749426567	0	1.2938907895698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131389010-2	3.44456134819636	0	1.40635122877144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43250891-4	11.5080486423727	0	1.28925027962668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123461985-4	28.9014891081296	0	1.39782304943908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118900588-1	4.45716639523469	0	1.31980458038382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95341122-4	9.49220020009157	0	1.29791950779396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143888682-1	2.62294170418874	0	1.3592342090447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71489885-8	27.9134060048465	0.189049214589639	0.356945472233448	0.529630515850885	0.59636813232473	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52778510270523	4.76410459415418
Merged-chr19-24432479-8	31.0159664731732	-0.254266510561806	0.33341751677753	-0.762606935050335	0.445697847407333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60579554273555	4.09907417497357
Merged-chrX-159779009-4	10.2946761848519	-0.952821786463922	0.533899558606872	-1.78464614009077	0.0743187323100846	0.497722927796625	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10815868579423	2.64543441043658
Merged-chr8-83749488-5	39.3963310385418	1.21050357180614	0.27242873971455	4.44337691050697	8.8557829121734e-06	0.000458928868323551	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86787145925448	6.0800874149423
Merged-chr5-104938110-1	3.67806780581827	-2.70940028259964	1.00293192977144	-2.70147973374134	0.0069031687256837	0.0832892288678964	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86897124298258	1.04885222765555
Merged-chr15-59654628-4	7.79355489787521	0	1.29653729256713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31293979-4	8.68613615233481	0.604073557356731	0.647003937670224	0.933647420341706	0.350485795682514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76097823734156	2.11086637835816
Merged-chr8-35679231-6	32.5871218548574	1.60259500101954	0.361395606647517	4.4344617686031	9.23025971623416e-06	0.000474182823441067	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19619126873994	5.66644875451961
Merged-chr15-62392585-5	35.1008885378026	0.131670528003827	0.481578083442646	0.273414701646214	0.784534452902446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46967328780906	2.63840556523641
Merged-chr8-125528090-5	16.0288538699179	0.478863219062869	0.609148463187125	0.786119062925004	0.431797737237843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86229911594964	2.75271604137506
Merged-chr5-143470865-5	20.2661265653637	0	1.27644211704087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75677134-5	26.1955725295044	0	1.27722860760452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88705312-3	5.72663508283473	0	1.30455329624196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34262508-6	20.0048130352097	-0.220283365618744	0.37299207584014	-0.590584572400287	0.554798804337122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65883380139779	4.48011354275022
Merged-chr18-77800127-4	11.5550772093433	0	1.29274219128856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5576841-2	5.36504626680325	0	1.30797798407567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28413803-4	8.9195392695272	0	1.28664728734979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75609677-4	7.95744588702719	0	1.28921918411755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126573314-8	22.8519220928033	-1.03483380031193	0.493658270704008	-2.09625536879217	0.0360595436192232	0.293260353122807	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52296088572175	2.27874693941374
Merged-chr10-21611186-4	7.90924880664847	0	1.30059117496011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125348397-10	30.5503363599978	2.00957305534794	0.347657018267218	5.78033219454044	7.45532673823627e-09	1.39180996246514e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31367331899144	5.49773954204413
Merged-chr19-9936763-7	32.706531987296	0.170654005737187	0.283383512317211	0.602201604256222	0.547039947945752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50626755787124	4.77889945051343
Merged-chr18-38929597-4	10.7187812567996	0	1.3291627960969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150981553-2	3.81677048754801	0	1.37181359983888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43072552-3	8.4697337937347	-0.823315928887766	0.693936422276245	-1.18644288216942	0.235447445452551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61571296714091	1.56070666783485
Merged-chr18-69627812-4	6.07613171438127	0	1.34364871731604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36578668-1	6.48384346593244	0.153791939430783	0.634069834204314	0.242547320712354	0.808356094595759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4718177628637	3.69783950918948
Merged-chr4-149462470-1	2.14689054246513	0	1.4440507716397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94609416-4	7.64814238080998	0	1.29176242593208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28827930-3	5.15605963413427	0	1.31644013116469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57639262-1	3.81630896026749	0	1.42891928700689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80747606-4	6.70871703946252	0	1.30062278581307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119836689-3	12.75396507404	0	1.30021971384576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53455683-3	6.08652934226152	0	1.34321551161549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29880229-4	10.5492774238293	-5.21387492718771	1.1052099478077	-4.71754252441358	2.38710516229081e-06	0.000160481248904378	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51011528186897	0
Merged-chr5-103719959-4	9.02270166564112	0	1.30814492555783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128097382-1	3.94527710883545	0	1.33525179101681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72163351-2	6.90480683602792	0	1.33774913564702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72853366-4	10.3452336804533	0	1.3046448774598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122844019-6	32.5949753248399	-1.00732784384364	0.334568922635343	-3.01082310905954	0.00260540584942032	0.0397967242127898	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62526334765773	4.34961638163778
Merged-chr1-171660679-8	27.0935141910662	0.116726032027905	0.336319745214537	0.347068626474624	0.728539762666581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56905087872182	4.50637233835556
Merged-chr10-82901448-9	49.6469593532512	1.18402874582379	0.246596752136961	4.8014774548457	1.57499243482802e-06	0.000116293170221776	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17155862870165	6.21503851465827
Merged-chr7-16299832-4	9.69653855154808	0	1.30055989166343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118100798-8	56.9352166535222	2.75087834634426	0.345213171694295	7.96863669147686	1.60434347505293e-15	2.83344401948132e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83420851818744	5.89248415470884
Merged-chr9-111552025-7	19.7345681807994	1.36606453211648	0.372823710775358	3.664103147505	0.000248206752186466	0.00644811902450547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34812831507273	4.69120683874514
Merged-chr7-44983280-4	6.83748083388637	0	1.2918245110685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118275250-4	11.0931757917222	0	1.29391209897003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58443944-4	7.41712116520953	0	1.29639174499344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111778718-2	5.20412408256399	0	1.33298887625007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13659305-6	17.0964191443169	-0.781240773999568	0.491837565764957	-1.58841216771334	0.112193167825091	0.676138960130813	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84531955805888	2.32198339548792
Merged-chr6-97820475-5	30.582821464916	-0.523037901753394	0.310473142248053	-1.6846478183788	0.0920565396953793	0.582279222043777	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22935596746247	4.72795495050918
Merged-chr3-144695462-4	7.84380265690187	0	1.31157945288661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96758005-4	7.00856249938817	0	1.30764352229382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89807337-4	5.46394826615526	0	1.33283852300044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43861360-4	7.32589465793961	0	1.30603881101972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106813460-11	53.3108339699871	-0.533516311647289	0.268286778814957	-1.98860455965766	0.0467448677255672	0.353131806519643	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62316392412386	5.05309911423625
Merged-chr6-17655295-3	4.49908544720592	2.51595454641711	1.34707340935495	1.86771895944548	0.0618012545218864	0.43326518377719	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr6-97523296-8	27.5467845227426	-0.282334696775653	0.3485017694126	-0.810138488684085	0.417860585526807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3712916507674	4.59754178092099
Merged-chr5-105496784-2	4.99068248036553	0	1.32024868095249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28432586-4	6.31077847666731	0	1.29509019020408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97442177-4	9.04602675751831	0	1.28899807559092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39636361-3	5.74832589452557	0	1.30266495557254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24682113-4	7.00915449437784	0	1.29707951339848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76175210-4	10.6428808199179	0	1.29905712381941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93370500-7	34.5822195438866	-1.14793091032388	0.284537294794849	-4.03437767675248	5.4747200904914e-05	0.00195492381985383	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12376315240863	4.95032861447387
Merged-chr7-90041691-9	94.43501795604	2.32253358714511	0.268930328260371	8.63619065268269	5.81184882208661e-18	1.98736641192323e-14	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66750892364308	7.00248916930986
Merged-chr7-114086280-6	18.4825557631426	-1.37087114760503	0.379326093376944	-3.61396479583273	0.000301550024170539	0.00750384153825135	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93610301674222	3.63332847664779
Merged-chr10-30773449-2	4.92226696850219	0	1.33544632897087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46772998-1	2.43014919966856	0	1.34887036752396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84209684-2	3.35069826379101	0	1.35956518798894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95795018-2	4.55167921193924	0	1.31137520859342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32657424-1	2.50200019890657	0	1.36026667766596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79196861-1	2.6932200946496	0	1.45193722348192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19635521-2	6.54941007290618	0	1.36040150589891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47255312-1	4.34616192895353	0.174753425839381	0.958605486323138	0.182299630382537	0.855347588736347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44111299935724	2.37528155229931
Merged-chr12-81963323-1	1.62416244647063	0	1.50259347127217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20390802-1	1.92674013293353	0	1.47890180810428	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41684178-1	7.13051646512776	1.1935123174631	0.604404839007321	1.97469020834335	0.0483033147956187	0.362017250674906	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23048897519287	3.28907101520903
Merged-chr7-27507078-2	4.18252037141246	1.92752532531421	1.27963401579984	1.50630985228179	0.131987650134283	0.758630045357978	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.688405034366054
Merged-chr13-60683512-7	41.0315829781532	2.00241873691403	0.405734175672733	4.93529718957959	8.00288040224892e-07	6.74782222923043e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52909992288204	4.87943350479425
Merged-chr10-98517812-3	4.50507457720875	0	1.35304646283107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145289523-1	4.66137697099953	0.0428950201633064	0.819845192803993	0.0523208778191393	0.958273018004919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17658627455304	2.40790914314352
Merged-chr9-37468456-1	3.71427924441251	-1.38091800640057	1.31338036741426	-1.0514227566225	0.293064468655496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0
Merged-chr2-167146091-3	4.63016129366027	0	1.33161186079688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34311990-1	6.43291416306673	1.82357374747961	0.758561107203666	2.4039905686728	0.0162171916717203	0.159190116716274	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95188542245689	3.08599165013949
Merged-chr16-94581723-1	2.04233649359549	0	1.41703684846539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34272370-1	5.37788512156389	-0.0333356279447983	1.19398078662313	-0.0279197356592978	0.977726167798579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.772096888724258	0.73596151290311
Merged-chr5-90685904-4	9.94381558893073	0	1.31451118984476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15233894-3	10.7465402187919	-0.356515272645183	0.45284382365339	-0.787280854951137	0.431117474464177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0337650886168	3.75585758053167
Merged-chr1-89524569-4	8.65974792602234	0	1.3032852831766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45665185-14	105.668718695234	1.47981466618355	0.185242332453936	7.98853397374239	1.3655283770785e-15	2.47866159246033e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89878978799563	7.36335914869932
Merged-chr8-67813796-4	11.3859866258348	0	1.2969602695652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65019488-4	12.8788298207864	1.30601065966151	0.539646838302232	2.42012102539194	0.0155153423207211	0.153732457814987	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06920708932344	3.56210221426086
Merged-chr10-121370221-4	6.36630244418827	2.48610613188232	1.20793810531439	2.05814033098596	0.0395766644634766	0.314085100319449	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr14-77348975-1	6.29312195625261	-1.76756723882861	0.638097137225387	-2.77005981646377	0.00560459988546857	0.0710590190368315	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37381783790885	2.32021347423954
Merged-chr11-63093515-2	4.96058858657746	0	1.33076744336604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161976578-7	27.2879819072058	1.36530056762582	0.323561035625645	4.21960748452249	2.44728026343285e-05	0.00103374257333085	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12484722513194	5.39505192843406
Merged-chr2-18992775-3	10.5262424623768	0	1.32311438910313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16960633-3	5.79055986144063	0	1.36168510665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-81571756-3	11.959394933886	0	1.29123695502042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3825160-4	6.79803254641733	0	1.35875438642199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41319253-3	10.0967449649819	-0.888839302874674	0.826984434688117	-1.07479568610005	0.282466212275734	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54718008034633	1.17347279658369
Merged-chr4-150138289-6	26.5554199141781	-1.94972419022472	0.525074388502765	-3.71323422531482	0.000204627341795418	0.00556453527963521	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16676011488027	2.45916162824808
Merged-chr18-77868590-5	8.38483897346212	0	1.31408850549429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100943494-8	31.8631269247351	-0.340984352078917	0.284016988805304	-1.2005773088196	0.229915207456834	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53855972545381	5.24735824889366
Merged-chr14-76755821-10	108.304551947096	-2.24315728073447	0.337789256981278	-6.64070047928965	3.12195879403151e-11	1.36917798224687e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30047611326204	4.07571213568992
Merged-chr2-68502456-3	7.05127583467637	0	1.34129370003204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79174281-6	22.3368718409179	-0.182309240147205	0.377060767811462	-0.48350095186345	0.628740084072297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96723799255658	3.78099099430026
Merged-chr16-77602781-4	9.52423778505423	0	1.30969321224216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6479180-2	8.29846261002694	0	1.29885976513711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147992734-4	9.20120855057888	0	1.29205001553831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-35152047-3	5.19015388486302	0	1.3377507157635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55853534-3	7.90151496342577	0	1.29991869814767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-62940776-3	5.57848089158072	0	1.31292225977348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47900723-6	16.4755524518359	-1.13531766547723	0.522828282118506	-2.17149244657713	0.0298939675106413	0.25598888755738	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15578559242012	2.90676096711236
Merged-chr12-51848176-4	7.75192423630497	0	1.29972001196075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60851426-4	18.1955021579227	0	1.2916075522897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4054627-3	5.81396761749906	0	1.30285126568315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80985770-4	13.2977736136015	0	1.32331986773347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77537657-5	24.2186915749894	-1.05261795237452	0.487222636486032	-2.16044549975399	0.0307381983673327	0.261559247005949	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8226912780642	2.96691840175541
Merged-chr7-104258902-1	1.72229191486281	0	1.51168487757818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-114233278-3	6.58146245000551	0	1.29960778838452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57706871-1	3.62620367241295	0	1.32583064862398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118841400-1	4.8857571622132	-2.37418949668375	0.937689789237681	-2.53195622255193	0.0113428151745649	0.122109983590959	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98128236202924	1.21171060354126
Merged-chr12-118758236-4	11.1764867260269	0	1.29582947309163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140831649-3	4.89830688885749	0	1.33153773151011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71159696-9	36.2350693588583	0.645354394963772	0.347328607706908	1.8580513687728	0.0631617198900507	0.440534288390997	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45999642371785	5.08165296794787
Merged-chr9-63793879-4	6.69764466404451	0	1.29507665025416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17569476-3	7.44202194445336	0	1.32188740958581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20701618-4	6.81487314495123	0	1.29937478652046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66473181-7	33.3229584566334	1.48952894538933	0.376885705835707	3.95220333996602	7.74348965912176e-05	0.00258959096860272	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92192374266339	4.39742078296426
Merged-chr8-39620592-8	42.8888857738742	-1.05050020270749	0.336682647285065	-3.1201495270947	0.00180759257323067	0.0300175207853446	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62496161508237	4.56511512580739
Merged-chr11-20960297-5	11.3156128895705	-2.86413460638655	0.704291657573125	-4.06668824710474	4.76859672565724e-05	0.00175061079570111	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22543594396724	1.52861812840328
Merged-chr2-29632371-4	9.29302365288297	0	1.30424290041616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88653770-4	7.56526030900982	0	1.33434135828325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26996280-4	14.7130947749284	-1.89051271537816	0.711906213893459	-2.655564284288	0.00791758412383746	0.0923073063615134	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48736430674583	0.843323834477631
Merged-chr15-58144742-5	25.0188385375462	-0.672976525855906	0.297370824741686	-2.2630886081057	0.023630227657389	0.213401896934247	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67102284533096	4.96777374924001
Merged-chr9-106306905-3	7.08429228032818	-0.313182650512719	0.919147220710511	-0.340731760327389	0.733305526610483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23281702024355	0.666688015277142
Merged-chr7-19841509-3	6.74198594474138	0	1.29990659086185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100705897-4	5.4267304158329	0	1.34102986485455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122466018-2	5.25142235230913	0	1.41063547479555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-95881117-4	4.49361959937893	0	1.34644799132422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72942554-1	1.92733511709456	0	1.59432667092984	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-20943440-2	5.81486848680993	0	1.32844172507327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16207302-2	2.58782876582738	0	1.94174354642642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122257148-1	3.51438547286836	0	1.35975576486244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48388646-2	6.95050533797959	-0.93533340029937	1.29634480863809	-0.721515906930665	0.470592157364275	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0
Merged-chr14-121279319-7	26.9875154473393	0.946773320718338	0.348819815751067	2.71421885445292	0.00664322621990828	0.0809752397996879	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38440700733976	5.24309033344258
Merged-chrX-163867909-3	6.63252054973023	0	1.31000859834661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91517179-3	9.14431838542559	0	1.29264190449738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24360947-3	4.89346813861188	0	1.32980272462773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94045364-3	10.6621997663591	0	1.30087746402091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53474318-4	17.0306349033535	-2.92922346854419	0.490132120229838	-5.97639564444499	2.2812857184534e-09	4.98571560394835e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52149337803983	2.31447273151311
Merged-chr2-120663845-4	9.28829979563605	3.35188779310197	1.0723547066687	3.12572675091314	0.00177366272555702	0.0295469865461273	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.27663763006505
Merged-chr7-5083499-5	17.2845059218667	0.355428115590602	0.552768395227943	0.642996449614373	0.520226403641037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48472521120065	1.7337995627857
Merged-chr4-53469277-8	28.6934767268446	0.0157562549901925	0.291800513540607	0.0539966664177918	0.956937820182053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50894986841221	4.54151678129613
Merged-chr11-74568907-2	8.05829323502916	-2.55228298859316	0.79748702967191	-3.20040689519827	0.00137233699035341	0.0242173191929879	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80218391049828	1.20539659680455
Merged-chr15-64189441-5	18.4559981769452	0.717865223193653	0.470139810131917	1.52691860532344	0.126781252491135	0.737527617313781	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61832182537508	3.3009007084372
Merged-chr8-36149567-4	15.8365588262998	-0.314155145774954	0.373563480200687	-0.840968570070561	0.400365542215199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2657028908057	4.76361107964957
Merged-chr6-115879939-3	6.73798685214326	0	1.31185660553702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71195918-7	23.0307308994353	-0.338006990016352	0.345158641435871	-0.979280103230886	0.327441598715016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86612061709948	4.3323502663521
Merged-chr5-149284983-4	11.1642004527161	0	1.28386761098298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117712292-4	8.31476050291696	0	1.29191128407062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131937870-4	5.91806587726967	0	1.30084872950418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-12044752-2	5.49074587126224	0	1.35008605408595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140737431-1	3.16367071393667	0	1.38691878055339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36496978-4	6.27793149661598	0	1.29120642872851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126917697-1	2.56270598464017	0	1.36743888864931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32122585-6	35.2265450560549	-0.956886430303315	0.420680634358578	-2.2746148792	0.0229290427409585	0.20862172472162	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18496661060571	3.29592793539725
Merged-chr10-8945305-5	12.4747385050268	-1.82414496255049	0.711463519485661	-2.56393323422854	0.01034934505845	0.11389159686586	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2851387245118	1.28311275482176
Merged-chr17-44351554-4	10.4657662341489	0	1.30982685851148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70284753-4	12.3821665753973	-0.255795777087637	0.568765808391321	-0.449738316392684	0.65289913967599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62138170299057	3.41120696668619
Merged-chr6-85369637-4	8.83726582846854	0	1.2981027689946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96770134-4	8.03593825920742	0	1.30459626939793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53876174-6	22.1343311999376	0.25532165107721	0.483342652960771	0.528241506337601	0.597331724479658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81234752050031	3.40696885927468
Merged-chr12-34701726-6	16.8092065998222	-1.76917007700944	0.518149489575947	-3.41440088739125	0.000639224457388153	0.0133197580970938	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45288519582481	2.75275814396443
Merged-chr11-3144283-4	27.07652199022	0	1.30912248609186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-70856072-4	12.5270386993677	0	1.29155557092488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14378797-3	5.264966172825	0	1.32685540562095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121280366-4	7.81339680461887	0	1.31447719360313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50088912-5	26.020873970396	1.04349696447573	0.440330917844603	2.36980171545436	0.0177976271996847	0.171105450491481	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48653192735474	3.84033573793404
Merged-chr3-59228861-8	38.8987184004295	0.149685082296855	0.297154617894886	0.503727935837782	0.614452574521372	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49199756972218	4.60372557979738
Merged-chr15-99001684-4	10.9384739148959	0	1.28636722622603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90747249-3	8.2516953161248	0	1.29157057338641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3667694-4	9.74518403209972	0	1.29102264525687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12818671-4	8.0092922310368	1.41991153625847	1.26824310573347	1.11958939878272	0.262888775221462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.609949614787909
Merged-chr15-58682172-2	6.41454541621134	0	1.33786958397431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115523066-2	4.95241900447446	0	1.31847292431089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87509304-8	32.4793808036043	-0.564082551117897	0.342603914715991	-1.64645681759213	0.0996697435915841	0.619108276115556	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84082958218329	4.05177859707779
Merged-chr15-103313584-4	10.0863563584509	0	1.31879755826335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30137144-4	6.8235452986004	0	1.29019946582902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25301183-8	23.6407876661386	-1.11507396055888	0.374210809452525	-2.97980157812716	0.00288435151976009	0.0431503741781692	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25521799836847	4.09368297217468
Merged-chr6-72023839-3	5.53955859828861	0	1.33108153935863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122534621-3	7.08314462462136	-1.27582964746512	1.02828479152823	-1.24073569693567	0.214703402674831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47301595384579	0.563523181795778
Merged-chr11-111093102-6	29.4603781607322	-0.395879688006144	0.371397001409475	-1.06592052844734	0.28645956829683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01856605596414	3.22458026584382
Merged-chr3-139012597-5	16.7096165517804	0.346480928597753	0.430508824182154	0.804817251437226	0.420925144975787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79709841872079	3.54066964309322
Merged-chr9-89259104-5	15.4901551425706	0.588346351776664	0.489211124612488	1.20264303523903	0.229114486559141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09584079052666	3.82754570620699
Merged-chr7-31158779-4	13.0642083626588	0	1.29729299213022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94413196-4	9.87808195461041	0	1.30110496044337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9182060-4	8.12546655649679	0	1.28664934797293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112895991-4	7.2146525910659	0	1.31117818200475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57432608-2	8.30448706648244	-1.74171836780966	0.675699664863061	-2.57765166742037	0.00994742170296153	0.110454412676589	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4016250453584	2.46863827486572
Merged-chr10-111159947-6	23.204331373406	-0.198061673149306	0.293905239789589	-0.673896366363187	0.500377202418348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98915584735823	4.75484998590914
Merged-chr18-70478018-8	32.8631052161751	0.462252857792013	0.270334633091117	1.70992836732173	0.0872791200500723	0.559151115567845	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06141117761281	5.73806115408827
Merged-chr1-80716224-4	8.52013587618358	0	1.29523950301758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19674474-2	2.8651634954412	0	2.04342420057633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11718121-1	2.27760465079618	0	1.41596240112125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14178936-1	5.92799426879224	0.605458712532171	0.75712587466079	0.799680387100005	0.423895999154373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48432913869369	2.09470639183464
Merged-chr11-6188069-1	3.46451791836329	1.35587548682541	1.30966813021336	1.03528172942906	0.300537359819282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.469435083901436
Merged-chrX-13306388-1	3.66946458964986	0	1.36562621848398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64399315-1	2.03637762461876	0	1.43516069108471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74921700-2	3.76055467767195	0	1.36634485182323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26612347-1	1.47004086828007	0	1.44303512204772	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59899872-1	2.93659616122975	0	1.36855438558889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56439575-5	41.3039511782987	-0.293748108996617	0.422759740307664	-0.694834632982889	0.487158941311208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35407984450823	2.79398057630762
Merged-chr3-132154428-1	3.15231056811797	0	1.3577738444128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34528913-1	2.38505984890979	0	1.37186104420704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94564146-1	1.69708431099828	0	1.51579176955242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40954195-1	3.97593131187572	0	1.31630559652218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159646805-3	11.4848193647296	0	1.296044427117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8788810-1	2.44134746823213	0	1.39342824371501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44024945-1	3.18635486004035	0	1.37204141365083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116416392-1	2.53448647860728	0	1.42049804021596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97373385-4	10.5548092702529	0	1.2925360754368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21135180-4	10.6827635090347	0	1.31301826079331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81579904-4	6.10935142123217	0	1.30893935819842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40708388-1	1.6487598043585	0.730265181576185	1.52127648753728	0.480034489166645	0.631202869194198	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.382164212378408
Merged-chr1-87608561-4	9.84808982113235	0	1.28201233668678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21361303-2	5.9840635767622	0	1.33311071415175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144452847-1	2.42226605083798	0	1.39367914872261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140112387-7	17.2127358413808	0	1.29534333079005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173809499-6	20.6351092477761	0.4045244199913	0.36406971824874	1.11111800766391	0.266517557644046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59625424017734	4.90964113409783
Merged-chr5-67450322-11	35.6187037435442	-0.324098134563233	0.343624802961099	-0.943174450069961	0.345591679779881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32074300499442	4.00219281300692
Merged-chr2-52918337-3	7.00790709688253	0	1.35413512224483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37180761-2	6.20052253204613	0	1.32035359621878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-29960381-6	27.1957359012422	1.7776504442837	0.426251928056928	4.17042206093268	3.04036025412983e-05	0.00122559115739401	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.996659804214	4.51309877300704
Merged-chr14-19904207-4	8.4452820558929	0	1.31059007357132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22024379-4	5.74960500634636	0	1.33844581310212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13982943-8	90.6073951088127	2.02848165253269	0.345905914506057	5.86425836467496	4.51144547889771e-09	9.12708719083744e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09929170914677	5.06101064628453
Merged-chr11-64718911-8	23.9219685616047	-0.463090123207861	0.326066411455551	-1.42023252606928	0.155539997318493	0.850938046268361	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57862140484489	4.16765362083194
Merged-chr6-137694547-4	7.98321994210301	0	1.30319595619354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83303660-4	8.91936877682044	-0.190921455785623	1.23378480829733	-0.154744534461485	0.87702271941554	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0.423054662900563
Merged-chr16-48865188-2	4.70682884580312	0	1.40464124659178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34838967-3	7.9967455574119	-1.92849806154977	0.958151312293007	-2.01272809086341	0.0441432424863392	0.339453192061283	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76976275610538	1.20539659680455
Merged-chr9-96759267-7	21.6418156748015	0.546721119723782	0.39707164868776	1.37688279062628	0.168548488681264	0.900496242446722	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01395357552563	4.10740436119911
Merged-chr2-120134908-8	30.7507939038303	2.14032593810388	0.316757236246613	6.75699145334605	1.40886497706045e-11	6.81953265118460e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22553954475862	5.52712120936062
Merged-chr7-48928565-4	5.92253016935421	0	1.30646874951418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19901295-4	8.62969067839161	0	1.2893532170311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10704333-3	10.0282606252305	0	1.30720143150112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21223050-3	5.15664614621931	0	1.34304927897605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111999573-1	5.61170551414208	-2.03946419370362	1.00274371872331	-2.0338837886716	0.0419633138395814	0.326911624482747	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77655642029923	0.892489746801999
Merged-chr1-66650211-4	12.011757145004	0	1.29751802047997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28528006-6	14.092432895545	0	1.2843133853725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45104443-4	7.51089869496559	0	1.30184033038115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141579126-1	4.52195401908358	0	1.30626841409926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77284409-3	4.74706294652136	0	1.36300876784378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72224611-2	4.67501903402806	0	1.3315594642878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-98054987-3	14.3990566863173	1.36181042128202	0.535982549277731	2.54077380526127	0.0110607450951534	0.119942822600049	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12737947969171	3.47120376335721
Merged-chr19-23135566-8	35.4380668478967	0.347526152984644	0.346148834337817	1.00397897814523	0.315388746348656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10313710380844	4.4546281707072
Merged-chr3-145952004-3	12.3035183711531	-2.31157045517936	0.660883884159028	-3.49769529956209	0.000469296966407909	0.0104915085757411	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33611893022364	1.47711801254374
Merged-chr12-32890710-8	39.8554402509154	0.187475217072945	0.290156818390888	0.646116876083146	0.518203666841722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41733272178882	4.65020966516654
Merged-chr14-47513828-4	12.8070405178504	1.41042317096743	0.568721647427774	2.47998854509322	0.0131386603517007	0.136016980461185	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98201480375625	3.3194495740227
Merged-chr1-184484957-4	11.1202783596749	0	1.29184575490359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85465107-4	7.01613020226083	0	1.33408382165544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48270518-3	5.0501476612633	0	1.3259315372107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117803468-3	8.90343280708557	0	1.30803010929922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136464534-5	13.2792932886336	-1.90428920565009	0.569056968248398	-3.34639467031155	0.000818697768109084	0.0162609800470688	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12948182697652	2.1359713465465
Merged-chr2-166492017-4	9.21554029802889	0	1.3010827706355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77174916-4	8.64551443489987	0	1.29929119592375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45795869-4	15.1381849441712	0.494970546348522	0.559597363342259	0.884511934424161	0.376419922880961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38358642465745	2.61593211585416
Merged-chr8-94551805-8	27.139310582614	0.409020359787117	0.369957048025039	1.10558877569872	0.26890455022366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83333147220991	4.17217350951545
Merged-chr5-72656795-1	4.8996752673504	0	1.32032298805548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3152519-3	13.8522161354992	0	1.29994499659251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87183790-3	17.7610227539068	-4.23452529723902	0.565720136202047	-7.48519457989853	7.14412114173047e-14	7.52967322786321e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.31186884486745	1.97634481356229
Merged-chr3-149102368-3	7.10232054159411	-3.22670685774966	0.79698268786431	-4.04865363687677	5.15131136420705e-05	0.00186285330606239	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34011316279997	1.20275690226768
Merged-chr1-52648323-4	6.70900901179819	3.13420886893185	1.09074554700212	2.87345557132562	0.00406008179385355	0.0555856075636191	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr16-52059764-4	8.16673668970107	0	1.29988428935301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95888625-16	120.572320662176	0.355242711386599	0.171764704918641	2.06819387926562	0.0386217955913762	0.308096603208543	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39730587799368	6.74887190673563
Merged-chr12-41315159-4	10.655940667091	0	1.29627346948404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20770944-5	9.4787131722567	0	1.28917073064074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88868263-7	14.7855512679837	0	1.27833396496102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36789624-2	4.90966459026701	0	1.34039682581767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153553714-2	4.09437724786144	0	1.36000892401611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91012705-4	7.66732369899549	0	1.3012307955247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59413404-4	11.2954516375907	0	1.2990830930026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62060132-4	10.5202069107393	0	1.31115619900395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136465212-8	33.3776312299856	-1.32060132657818	0.299792066290722	-4.40505762183024	1.05755762644323e-05	0.000529151306719444	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43324248766462	3.7751334127327
Merged-chr5-66070033-7	32.8829285742192	-1.40555395134625	0.424874138098571	-3.30816546668738	0.000939093062729374	0.0181556139873117	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32543426036	2.26611452293889
Merged-chr4-105485361-8	30.4395024430614	-1.0373916102784	0.355101782903065	-2.92139228870496	0.00348470746659721	0.0495348475336658	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51351012304128	4.42534054864078
Merged-chr18-65690842-10	25.7938395516081	2.65803869839882	0.517077761943421	5.14050089566541	2.74007017911705e-07	2.84662362360227e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81198298192219	4.6363135395374
Merged-chr2-58167862-2	3.85441216936117	0	1.33969413936369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125055414-6	38.8160782283723	0	1.27878910844969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11107960-4	11.4724858072094	0	1.29848522878309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143956942-2	3.12968061623435	0	1.36111713159463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106507660-1	5.40931165433262	-1.58805652596108	1.14335604083233	-1.38894313691213	0.164850041876686	0.885515070815779	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22976796090859	0.420961122473315
Merged-chr1-37029308-3	7.53038808700944	0	1.31040261360679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4239628-4	5.95205202601254	0	1.30637265701456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75638350-2	5.57176970378334	0	1.35639537250444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38284076-4	8.84475358695308	0	1.29117832866816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53439127-4	8.42192171734516	0	1.30316481449062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59799297-1	5.83260884400522	0	1.31100429373125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22817553-1	3.75035526512527	0	1.3216948042052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117258061-2	3.05100463861767	0	1.37152815579287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116493964-4	12.7452945135729	2.3065644509618	0.536717295664046	4.29754075301046	1.72703515688781e-05	0.000785897210041718	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37814551419591	3.97365286732077
Merged-chr16-45390000-7	20.7499174883833	-1.15853550712719	0.42776144555963	-2.70836822521838	0.00676149571437844	0.0820190642197463	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48998051343036	3.18287165853229
Merged-chr1-24461168-3	10.401091121384	0.449626206904274	0.577857366099375	0.778092022845221	0.436514765128116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97505527985189	3.22380280121829
Merged-chr19-41764078-3	10.9105272641895	1.27462026757995	0.49437930432322	2.57822335286635	0.0099309784252879	0.110290570390697	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77539746443728	3.91858364560925
Merged-chr15-101198346-4	11.7231171888608	0	1.29298821375687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53149100-5	20.2307098227577	1.59750131586435	0.461767547929408	3.45953569718711	0.000541107547667229	0.0116851334467491	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04178133783744	3.69899581190143
Merged-chr19-6268276-5	11.0008069108018	0	1.29409196754926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58250114-5	39.8701629161376	5.85794119189604	0.908200972748243	6.45004945785263	1.11813656133227e-10	3.80550790295928e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	4.16104602898657
Merged-chr10-13941633-4	7.72485692268766	0	1.29929496151538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81132122-3	6.87376989225844	0	1.29513180884695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121053732-3	13.3214440337616	-0.732248899681039	0.491201563320816	-1.4907299861397	0.136032400034149	0.774128862671914	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89080673822606	3.09045752086053
Merged-chr4-119663184-4	17.9579987165943	0	1.29420140152609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103412709-1	2.62159450983201	-4.27528550955819	1.22811116462601	-3.48118772363748	0.000499195493224658	0.0109622443402907	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63977378521358	0
Merged-chr10-88715904-4	11.2678208698326	0	1.3188718593955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17249297-4	6.75167061032759	0	1.29591785428705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133480657-4	7.16792526825012	0	1.32195192018383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36287621-4	11.6195523202153	0	1.29305902779436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116137875-6	18.2768849904904	-1.80981824860233	0.481138606505993	-3.76153196631872	0.000168875833201343	0.00478757492250541	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63505201273177	2.87613034754277
Merged-chr1-136656778-3	10.2632618816122	0	1.31667780930355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151563681-2	3.76879759423177	0	1.34919831942837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120776789-4	23.0621234278991	0	1.2930270708377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57591388-8	30.8093192967285	1.71515794582129	0.489750283970668	3.50210709816354	0.00046159403236333	0.0103725322004175	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03552279464163	3.49985909124589
Merged-chr4-3929781-4	7.08033597419544	0	1.29312706542118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55506929-2	4.89703302418842	-0.875786132906424	1.24428764883373	-0.703845395980018	0.481529059538936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0
Merged-chr7-136381046-4	9.90284491697567	0	1.31403802709723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61368651-2	5.06076670686696	0	1.34441413254197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28727310-6	26.072012915897	2.63333144597835	0.450511426674568	5.84520456099456	5.05946138760985e-09	1.0018653449538e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87086532755525	4.57728823790407
Merged-chr2-141033641-4	8.19647327290825	0	1.32515816506213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-124077747-5	19.9099395185682	-2.42914242698619	0.550157870545205	-4.41535522263622	1.0084425412255e-05	0.000508862442462715	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80163720041943	2.09032553771468
Merged-chr2-22795381-7	18.4043155596315	0	1.28733352279639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76751230-3	9.20042748440485	1.75656485486381	0.651324151833376	2.6969134338399	0.00699854611257695	0.0841302774979559	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56930007226528	3.22201167303981
Merged-chr12-35054645-6	14.684420152405	-1.37502513188348	0.483633413984726	-2.84311441708389	0.00446750292771343	0.0596634879040183	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58758828864222	3.09328727439587
Merged-chr15-101244075-9	49.1744919790182	1.38952658153853	0.302514840776222	4.59325095579824	4.36393741322097e-06	0.000260556869040145	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59671713248603	5.15042841843153
Merged-chr11-61564799-1	3.85863318830982	0	1.34501874376984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10905304-1	6.12178878694363	-1.54370626902853	0.807263268547451	-1.91227116254923	0.0558414226301695	0.40218989399317	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13868695507117	1.96617270997603
Merged-chr5-29784985-3	12.2081772109519	0	1.29540071451984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59524246-4	10.1462766558173	0	1.31364164242961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35927640-3	6.30815560543109	0	1.32999880818189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-59214110-5	16.0569216556037	0	1.28877212318182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-80855215-2	7.25799765715648	0.525529537311166	0.781832007438244	0.672177056338637	0.5014709855329	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51178248861123	1.88086620139027
Merged-chr3-148988628-1	7.65713864210886	3.22904841095651	1.03916969655268	3.10733504033892	0.001887823111926	0.0310891353507853	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.87744667331019
Merged-chr8-84998043-8	28.7882879743065	-0.165510021734942	0.373814668645309	-0.44275956942713	0.657939650069367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47858833982577	4.21767067225825
Merged-chr18-82530303-4	7.20701012492896	0	1.30580993064006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5787246-4	7.45490866493993	0	1.29537510965605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12206521-4	10.1834741918847	0	1.30161235520444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21865901-3	8.91531016271983	-1.5808374922616	0.612860457178533	-2.5794411660028	0.009896031408673	0.110062375580871	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07396035242694	2.24553328998514
Merged-chr7-121271403-3	9.63810116975626	0	1.29810335884724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108704423-4	9.16061219653238	0	1.28690432778575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152729728-2	15.4732093299252	2.20398354626602	0.586204927959874	3.75974926368563	0.000170083738009269	0.00481763846725344	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52894300268921	4.17599020497327
Merged-chr13-65097233-4	10.5809377424785	0	1.3061556038112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-42978586-2	4.0841273498302	0	1.33901170725773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3155205-5	26.2086735133666	0	1.30363424839536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61384871-5	13.3147263505916	-1.07453999849417	0.722151141937862	-1.4879710577078	0.13675852648845	0.776894955395485	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82413759544697	1.87822650685341
Merged-chr19-11231497-4	7.38363508094346	0	1.29170314772482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55687752-4	8.53264494756998	0	1.31159776228325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10965165-4	7.1791944356073	0	1.29516054139032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106759247-1	2.0452001152849	0	1.40463640397479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152800213-1	3.83941130005869	0	1.34181468072262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53753067-4	12.9741556809358	0	1.28816659698416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65111133-2	4.3058569391854	0	1.31372257736015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124859690-2	6.47658033302819	-0.00797726836654584	0.713723280161872	-0.0111769765513836	0.991082248648307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89408903469255	3.29793375498557
Merged-chr14-76858912-1	4.17546556520543	0.135020574560297	0.758126095408002	0.178097780010636	0.85864618545719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81321718666885	2.97749077568792
Merged-chr6-149315056-4	6.57485979792235	0	1.37323052291794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55125086-8	20.428153348202	-0.350617670041281	0.399045380973423	-0.878641093867548	0.379595907089123	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34386830872536	3.93544225206553
Merged-chr4-19919063-4	14.4729698108535	-2.10030129476862	0.874382705287274	-2.40203892651168	0.0163039733827972	0.159730051675002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70685633972686	0.683637474991079
Merged-chr9-77966421-1	1.99999328258584	0	1.34950047184258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44568191-3	18.5471597632714	-0.514719309291744	0.411786471567243	-1.2499665356483	0.211311772055852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80171004971817	3.43671865061578
Merged-chr18-35939689-4	11.8930659592601	0	1.28677515599458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120572768-3	12.4397086219275	0	1.3055896132644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53859404-2	3.40416229129229	0	1.37964714345606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90641874-1	5.53448656233726	0	1.31770998525652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-11407580-4	6.54538032757446	0	1.3027952314356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-68208-1	1.49180616749395	0	2.43325302823515	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32392957-1	1.77161156641428	0	1.38939990051186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105797218-1	3.64558895206924	0	1.40865026709083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-96358097-3	8.84410182261219	0	1.32439832768357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67631045-2	8.07337255756449	0.386965693149825	0.588056809407461	0.658041343896247	0.510511565004697	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59441997595594	2.98801616977499
Merged-chr10-17576059-4	6.8726897574785	0	1.31126388562904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113637717-3	9.40553136917878	-4.71711391316042	1.04766523096543	-4.50250115565405	6.71583895828148e-06	0.000369716270065595	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57542422709652	0
Merged-chr7-121047658-2	2.48578538162654	0	1.43972437910037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12758958-2	3.94687790790505	0	1.38094519043015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83158611-8	61.2978130351536	-1.71840029638951	0.31578047995963	-5.44175592047106	5.27579301831952e-08	7.28862517072109e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.83514660468654	5.1297602961387
Merged-chr2-128746012-8	40.4115600764261	0.710229497998777	0.332052590194938	2.13890666409746	0.0324432282336282	0.272148291675824	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13432889375001	4.86423465048289
Merged-chr4-87368282-2	5.90386039752132	0	1.29315437453318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151142414-4	10.0174355082057	0	1.3086319950647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123287526-8	44.4948575052503	-1.24115994120247	0.276299464373643	-4.49208232819459	7.0530146574317e-06	0.000383432858406433	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.82284914393289	5.44440574451421
Merged-chr8-39308362-4	10.3921321986943	-0.418225998672407	0.489331686403698	-0.854688159980245	0.392723806955203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17309813072953	4.0087374636683
Merged-chr5-97959842-2	3.32227841563091	0	1.31793380823661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60624337-3	3.94523846410278	0	1.36430672740859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131037202-7	21.2905026127695	-0.7363325731727	0.469001885712296	-1.5699991739999	0.11641530344207	0.694411174689687	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78388922015653	2.49220702424193
Merged-chr1-135523258-4	7.50243879394067	0	1.29799011146108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98708376-4	6.14046420101647	0	1.31082756161861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20966954-4	5.86471638666086	0	1.30736927641592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79852940-7	39.1264703123001	-0.23040237379616	0.279542509887416	-0.824212295614551	0.409818941847637	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92883371785005	5.62498145988464
Merged-chr5-115535808-6	31.131746506844	3.3902274073385	0.48219818811065	7.03077591523539	2.05388135338914e-12	1.22011755380515e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55303899597427	4.73318941033951
Merged-chr12-17658628-9	50.7445544482834	-0.672258620188828	0.287502915480308	-2.33826714092877	0.0193733944667703	0.182917762581357	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67351558836707	4.93838590900939
Merged-chr1-177491161-3	7.64906401694969	0	1.28836554890957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67599538-4	10.4381973916783	0	1.2901875403747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86118761-9	38.0388496907012	-0.171323116942533	0.266940689171041	-0.641802182629258	0.521001632312943	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19044673738791	4.880597241091
Merged-chr14-62872292-1	5.31528965222167	-1.55420590277893	1.32732021569336	-1.170935155212	0.241624842913598	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.804694039803978	0
Merged-chr6-97452344-7	20.4140833879286	-0.154703838884161	0.475421561806956	-0.325403497258667	0.744875708994649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33835598465535	3.23943310347417
Merged-chr10-98954690-5	14.6348307555711	0	1.28181710218605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37718517-3	7.54826694488487	0	1.30450954442341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80722868-3	6.48587536436369	0	1.28896728184396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20108325-8	27.0929150787215	0.329162486303185	0.291335831755522	1.12983866186225	0.258544213906335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11347238710635	5.32993174439045
Merged-chr17-26437855-15	56.3993370084662	0.765371267049341	0.268615870936674	2.84931513681773	0.00438134591202299	0.0587692071603885	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8655909737712	6.57452494338343
Merged-chr9-44435945-4	8.68545783987072	0	1.29401127653027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63826971-4	8.34108028844055	0	1.31044273585514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45120027-4	7.48259692849515	0	1.31521777456649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56101214-4	11.3686574504309	0	1.30320712144472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118559806-4	9.527995510085	0	1.30727835236337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33886802-4	5.37469002196238	0	1.31921079306945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66250385-3	4.97503395367383	0	1.3103918244185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54644544-3	5.17320987562466	0	1.35332470237271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86545230-1	2.76217682998725	0	1.35896341305984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111640448-3	4.63288704175137	0	1.31153723143157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82974416-7	24.8223357930767	-0.871420569798064	0.381592288928257	-2.28364302707883	0.0223925188901233	0.204795176962071	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95837632782246	4.03099157313391
Merged-chr18-53229407-8	27.8652747131262	0.267671729264939	0.357874647855855	0.747948285436391	0.454491351219922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02760845165289	4.20342156738683
Merged-chr19-60608660-2	8.72677304610349	-1.55874858235689	0.663745362892264	-2.34841351744389	0.0188535769137193	0.179018575559998	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84314539977351	2.57270279668386
Merged-chr8-40610432-8	30.3840741280086	0.431935029647835	0.36780482639363	1.17435933041719	0.240251128008971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21313531480372	4.58822182129435
Merged-chr14-31593697-4	7.73121574911953	0	1.31413586867539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48452414-4	8.8311463350418	4.13266745199053	0.918641606268727	4.4986721957612	6.8379198598883e-06	0.000374543764597033	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	3.34005910040985
Merged-chr5-72552195-4	7.24356949795121	0	1.3038577848419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101548067-4	11.0548879879474	0	1.30719110134329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93230701-5	16.3495448542543	3.48823330998359	0.854231211990846	4.08347676954348	4.4366866345744e-05	0.00166047952361339	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	2.76048334404659
Merged-chr9-70239355-1	3.19110357207467	0	1.41578300937864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129756730-1	3.90214872287664	0	1.31596814698269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91362109-1	3.65903728574538	0	1.3116074329972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-36094371-2	3.95369934058511	0	1.37173931989241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3180812-1	3.12193228264119	0	1.37266074193772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32856864-3	5.37410188314295	0	1.30915986028867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65164303-4	9.23788900455781	0	1.30925006509234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93248874-3	5.89279046870873	0	1.32417169841024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114604492-3	6.47633577091394	0	1.3110193319201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-82888868-4	8.54967753533527	0	1.30773551290313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130291668-8	27.7344816150866	-0.252520038789263	0.303928152532123	-0.830854386753703	0.406055894111897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22075964636493	4.93067105572416
Merged-chr4-126553254-4	6.60673747946094	0	1.29499485823581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16307572-3	4.41652078636845	0	1.30936303882866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24826582-4	7.86994508903072	0	1.29945059795497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99616004-4	5.55473299012555	0	1.30822815636649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37660335-8	42.7529358523246	-1.71044942763453	0.384811806980279	-4.44489851040924	8.79333683819347e-06	0.000457127596681456	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59204518806777	3.86414349527237
Merged-chr4-32353025-4	13.3332760566873	0	1.29133115009504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170545542-4	5.11996469208284	0	1.33565000115227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129936699-2	4.54901709009644	0	1.3188592135656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152886867-5	34.5713970031617	-1.53358779209479	0.300072004416092	-5.11073265591365	3.2091183969286e-07	3.24306936069267e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.81306265730674	5.18815717067415
Merged-chr8-68590734-6	27.3647734459639	-0.577866225314805	0.417391477363125	-1.38447059093176	0.166214407083391	0.890793623002649	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98578070891728	2.82925595730773
Merged-chr18-39854775-2	9.10099400709723	-3.01314370057994	0.984027863508257	-3.06205120029577	0.00219825848100901	0.0348320559408377	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10854637931187	0.581381506691384
Merged-chr3-30572471-2	5.22117893200758	0	1.35781992092748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8659907-3	7.92931306552314	0	1.29628593068669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62854151-1	4.09416242936793	-1.49780740464147	0.886045516411167	-1.6904407018594	0.0909436737794664	0.577195542617814	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23447408372045	1.37490486545505
Merged-chr12-16869640-1	7.48535586681893	1.24713581496002	0.62782450470081	1.98644016858556	0.0469844701512681	0.354532007679534	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32191227164021	3.78846936301897
Merged-chr1-33964857-1	2.46772774061924	0	1.3387053969837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67145553-3	6.06753478487512	0	1.34662520617527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4207308-4	6.9059623681279	0	1.29954777082814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75069657-8	15.5593169910514	0	1.28824823643578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8619485-2	3.42664888120306	0	1.36388293540628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23887527-4	8.52206148078727	0	1.29117529475069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11664157-4	6.48806032267626	0	1.31285453727529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84201417-4	7.38059325936224	0	1.3012412942857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53826115-4	9.40137756992393	0	1.30291034110116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166412623-4	10.7354714603075	0	1.29646655153428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-39230960-1	6.0401645043965	3.17989048193249	0.946215091885515	3.36064232033749	0.000777614562299175	0.0155871169288349	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	2.48211543439749
Merged-chr3-87515032-3	14.1612439214313	-1.72411745698188	0.502252325110659	-3.43277147916042	0.000597445424494026	0.0126181863959233	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97671943782739	3.11001010080327
Merged-chr13-24094998-4	9.62929666045663	0	1.30483651269575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91763964-1	5.25998190066945	0	1.32262479884786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33660667-8	51.9630696373015	-1.04184886202029	0.370592106214861	-2.811308834021	0.00493404010275321	0.0644968562821587	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64178039318806	3.53594653207265
Merged-chr1-87651631-3	13.0310565159138	0	1.29372303085323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37230091-4	7.86296341273324	0	1.30031583266819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75529581-4	10.0639216981769	0	1.30472282958894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63803251-4	9.19522915072018	0	1.31257140460306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28654459-5	24.1487184303617	-0.814932664115331	0.387419479246109	-2.10348913198978	0.0354230343222129	0.28985144012263	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44322612427591	3.69358828237036
Merged-chr4-46557126-5	14.8918512053515	-1.41087765477904	0.512330739740512	-2.75384150381769	0.00589002847083587	0.0737760782931264	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03526863351349	3.50361665125625
Merged-chr10-117397402-8	33.5142921634886	1.90207662221647	0.317634703149032	5.98825192385867	2.12108349076049e-09	4.74672334887791e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13162376801326	5.53987419778546
Merged-chr1-135544978-4	6.16307169467342	0	1.30151658045467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102742761-4	6.16163403087703	0	1.29678361880019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71137238-2	6.31076434224353	0	1.30644242936324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88746475-6	33.814588403316	2.94020960075122	0.516336163060351	5.69437085972139	1.23827668203157e-08	2.14064624508029e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01449608303713	4.73302905220518
Merged-chr10-41594619-4	8.09652678167884	0	1.30163765794643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98589094-4	6.42436722965556	0	1.31729163915578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90231806-4	10.0270547309341	0	1.29189231108391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125613767-7	25.6509703772339	0.135286901487749	0.399546114938483	0.338601469090942	0.734909975740683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55655076590159	3.51445818748162
Merged-chr4-43466109-5	19.8990332346304	-0.0679439846315256	0.458830962690834	-0.148080644412193	0.882279124551476	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40107371329198	3.42571656119194
Merged-chr11-23953769-2	3.13254199725212	0	1.34593025571762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100377861-2	5.48977542960135	-2.21208909464926	1.1186826862515	-1.97740531952056	0.0479958331680594	0.360208534994833	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64899330401337	0.306240821987646
Merged-chr17-57331580-1	3.26961846940766	0	1.34228857796392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145338378-1	6.66945263292633	1.65107914365384	0.79576936300624	2.07482119871571	0.038003109127776	0.304506045583215	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23295579928493	3.32164393647188
Merged-chr5-30036126-4	15.7205682689083	0	1.29509832016913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47054804-3	10.6744493113852	0	1.29820028535161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142768958-1	2.62687812328308	0	1.35947787861505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35278037-3	9.54792625854213	0	1.30960380687272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82276041-1	3.2563671264599	-1.70793920054233	1.03616572159865	-1.64832629080534	0.0992857325153586	0.617486007133209	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74787831892911	1.34591112769102
Merged-chr16-30511808-1	7.56989566439955	1.49434921040466	0.57288942785058	2.60844263789489	0.0090955254667841	0.103133126349553	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93133993735734	4.611439243215
Merged-chr10-95369448-1	2.05228967849386	0	1.59717327451732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79983459-3	5.89554472205486	0	1.29639764838891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76625653-2	2.9099627106079	0	1.40726992682916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21941395-1	2.40837711476551	0	1.39547072588684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123155586-1	3.59048740322808	-2.73797475404785	1.21463063031878	-2.25416244717068	0.0241859502864273	0.217147020662203	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87786878455901	0.420961122473315
Merged-chr18-70633730-1	2.65844524862438	-0.438620500173194	1.39548988610953	-0.314312919455131	0.753283386786747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr13-109823876-1	1.83775073747704	0	1.52962008372441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102565767-1	2.38592023337806	0	1.42770602539177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62163096-2	3.63271780962424	0	1.37752501729883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117114080-2	5.18271077115735	0	1.34926888707326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38846865-1	2.31400844603589	0	1.51777787870633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21781681-3	6.69036317088366	0	1.31174385796851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53796100-2	4.30516144642434	0	1.37381604116077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27615601-5	15.4526047434632	0	1.28088030774222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71396500-1	2.95883994271656	2.51453131709428	1.31331261106657	1.91464796416763	0.0555374138665929	0.400523987035248	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr2-3719602-1	2.49148856054585	0	1.38524257156047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132403210-2	4.71364697938536	0	1.40162005622347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46597515-1	2.38066381321315	0	1.59211355221006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23188015-4	12.6550059665933	-2.44191958587359	0.678486180847568	-3.59907048191185	0.000319356633368299	0.0078453678812349	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29581771212886	1.51144536133504
Merged-chr6-90728851-4	6.12210668599126	0	1.29303869464926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84571322-8	29.1162757942937	-0.582328468878705	0.308803180033234	-1.88575930084668	0.0593273976828774	0.420113581381156	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1364596222951	4.5641792639664
Merged-chr13-109232067-3	6.63340927055268	0	1.30143876697495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166952955-4	7.71498860708924	0	1.30671668863365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21566299-4	14.1692911675484	0.804681056699045	0.520908229864758	1.54476548951427	0.122402997589855	0.719717886036921	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68521569530076	3.81660350371508
Merged-chr4-150110541-9	32.4923001479931	1.04714489414349	0.329297462524695	3.17993611646782	0.00147307523136797	0.0256225622180725	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95653716791342	5.20602210592932
Merged-chr18-64618989-7	32.1723100895959	0.363066299371081	0.321263594282387	1.13011964577583	0.25842581261548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18639806578992	4.54850870113618
Merged-chr7-64356835-7	41.0461348678781	1.09749585197196	0.42684847567338	2.57116029345212	0.0101358400883877	0.112089457846638	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.646503156257	4.77711372993726
Merged-chr11-22370573-3	14.6212812825904	0.091713413043287	0.685917532660497	0.1337090957386	0.893632612394985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96618204540553	1.88639437725876
Merged-chr13-33076325-3	11.0080067612715	-0.0784588734613927	0.695332910093538	-0.11283641594188	0.91016024694884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10677255705419	1.69164407730823
Merged-chr15-25322257-3	7.35401000198475	0	1.30079473840142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52501152-2	4.46468752674192	0	1.31905301587051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92428276-2	3.65932616633074	0	1.31513248647645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75371162-2	4.14601554915029	0	1.30752666463154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83815801-4	5.59720521890514	0	1.32320021503468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62337337-4	14.7040750952104	0	1.29994299461397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88993830-8	35.2032402584235	-0.722603754523192	0.277474241463542	-2.60421922666338	0.00920838352618957	0.1040697042377	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77351701548103	4.86890699548772
Merged-chr1-138912445-3	5.22121816331909	0	1.3453021045857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122375639-10	77.580688059421	0.487926724702663	0.250311076863701	1.94928139344129	0.0512618293673704	0.37756486720471	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13682327106766	5.6049373021801
Merged-chr2-9926982-6	12.8930601685055	0	1.28572823704871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72324886-6	25.3949935276563	1.72930105881495	0.44403992810335	3.89447198183595	9.84128656072689e-05	0.00312482367151244	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85067427604778	5.73893928292722
Merged-chr10-80688045-3	6.57910188159974	0	1.32233011840301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128608307-1	5.08344297460655	-0.172491592821399	0.902728803383558	-0.191077976214867	0.84846450215788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78856633434854	1.86170925882537
Merged-chr2-120652949-11	57.315002976579	0.613543868752349	0.253906432819046	2.41641718935735	0.0156740911095483	0.154913914279849	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34641326218025	5.92162678873783
Merged-chr7-84272520-4	19.6740501047378	0	1.280726651611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38201100-7	23.3248771107656	0.103508670196098	0.368034704164194	0.281247037371559	0.77852092938547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77285741361219	4.0355622268493
Merged-chr15-80225388-8	26.0229376839721	0.610217789043753	0.265794063055426	2.29582926732455	0.0216856453127667	0.199615463953803	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92667117156554	5.5396889505245
Merged-chr17-84293353-4	7.68137021909939	0	1.3126226053153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63374391-2	5.0691629287972	0	1.34962558429189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41525159-4	12.0999134941538	-0.860209964218953	1.0627833604792	-0.809393519137421	0.418288828825701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0688710977108	0.469435083901436
Merged-chrX-23710211-4	8.76724141510284	0	1.29758021164892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106016837-1	3.67648573866125	0	1.37406396836327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41334656-4	11.1528929916266	0	1.30054569509176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63985301-4	7.06537255951455	0	1.29645243605011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23136743-4	8.35375794770733	0	1.29697414716365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4316271-4	6.96971966578131	0	1.29232357151154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84610926-3	9.14194737746882	-2.22020720544737	0.991343503766258	-2.23959424459078	0.0251172767024898	0.223642671126979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31040751860213	0.729295484888209
Merged-chr17-23538922-6	31.2690324383966	-2.6069282380423	0.389449846637377	-6.69387409072381	2.1733843817558e-11	9.98790965232917e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.99577750182557	3.17847094812132
Merged-chr7-67484966-4	7.19746052491656	0	1.31958987015283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115485507-5	28.3618809289494	0.535503460977258	0.454625827764786	1.17789933671414	0.23883673955624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05558583148779	3.58756406921139
Merged-chr19-32470153-4	11.3338540925712	0	1.28563170605044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124582752-8	26.5677161472617	1.22406508085935	0.366852641442701	3.33666694083363	0.000847894899436266	0.0167239782971815	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31496520491939	4.7597816822868
Merged-chr15-77846452-2	4.1805234162921	0	1.37345743832017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113690606-4	10.0728069061639	0	1.30156031001042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75549191-4	19.0662187889672	0.367127475370385	0.516015343237055	0.711466199953144	0.476795388841414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62702579680669	2.96245250616566
Merged-chr14-25473748-1	4.32648919780202	0	1.30553030240844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134632335-4	12.9648135064457	0	1.29887169631607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191850372-7	38.3010756363768	-1.57410614172449	0.378854496548896	-4.1549094865272	3.25416337450056e-05	0.0012941600012105	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30889136672499	4.64227316483281
Merged-chr4-114961015-1	3.62393971450533	-5.21162620624022	1.09066310970987	-4.77840146956705	1.766943116005e-06	0.000127362178001214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80534471987314	0
Merged-chr6-143079309-2	5.00352464705565	0	1.3421685304764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76581400-2	5.11018331255054	0	1.32443160115871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46039517-5	18.0915376424603	-1.4886113333049	0.533978224275306	-2.78777535418263	0.00530713313712389	0.0682274093996651	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85699891738328	2.00024646985406
Merged-chr17-31088935-6	16.0317792025023	-0.404264239094898	0.457844005269024	-0.882973751851041	0.377250453478369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6874395332526	2.75418520035836
Merged-chr6-35236574-4	9.58509127885357	0	1.29293085722231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101327433-4	7.3482291701117	0	1.29234465937106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57390530-8	26.2347771773285	0	1.27885748503711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81097627-5	11.3201667181429	-1.5462971090693	0.582838811909797	-2.65304416499396	0.00797694327547396	0.0928171893303279	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09886279741165	2.24553328998514
Merged-chr19-37604140-2	7.20326409475021	0.793704119944262	0.527637102081554	1.50426138877092	0.132514076651408	0.760451818113896	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0448865775368	3.50104664305335
Merged-chr2-180126291-4	17.8294545169387	-0.302724762193232	0.42528632515352	-0.711814004562582	0.476579959347358	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4653370991206	3.83575809138766
Merged-chr6-120454268-4	8.36060400295042	0	1.31489165946716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56944616-4	8.10126636343863	0	1.29202906338094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135193029-4	8.82520267150353	0	1.30555609242764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121258993-3	5.0745215709379	0	1.31133815044377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52182228-3	6.19842737991078	0	1.31328328835534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75833635-4	10.7269435762093	0	1.30156012387844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148990043-4	8.44560848634732	0	1.2914699104121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131747866-2	7.72638773499481	-5.25738685002302	1.05260712847456	-4.99463352261544	5.89475967363394e-07	5.30190228219533e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54949046047732	0.306240821987646
Merged-chr8-79587489-1	3.77721989322349	0	1.34210437837149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95507020-2	3.47553363092204	0	1.39233708854679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80693018-4	9.44518112867531	0	1.30207985537614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55486502-2	6.03275683776675	0	1.33085724538116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185238682-8	24.8062122572537	1.02876056135308	0.405952566252009	2.534189082363	0.0112707897114716	0.121434628934183	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22234204707629	5.36200971412269
Merged-chr8-83055033-10	40.9571831350159	-0.327431921290731	0.34133667082575	-0.959263827407172	0.337425853188678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95661848878718	4.59540501390111
Merged-chrX-164836659-6	25.7219554633102	0.387943820607961	0.295585415901123	1.3124592748437	0.189365218377869	0.979602264546253	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36209473368246	5.65759024444221
Merged-chr17-71251336-3	11.7474321039651	0	1.30348032774202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31018367-2	4.70969889500297	0	1.30327856606993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116666853-4	10.7681793196239	0	1.31350092811192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81107004-8	21.5549604499408	-0.125404859991774	0.410571481865061	-0.305439772441355	0.760031234072091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52692121643733	4.36264169692174
Merged-chr13-95849959-6	25.5311741026561	-0.301760863909087	0.481321008412279	-0.626943055954482	0.530696562688274	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05691232650276	1.88513399620689
Merged-chr16-35765558-7	44.4199158141171	1.47285847052316	0.263406944515428	5.59157038639463	2.25025038146371e-08	3.55180824703206e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24741053266679	6.74475357314275
Merged-chr13-64308170-8	69.0329498029696	-0.778044882228185	0.246611390681897	-3.15494300598541	0.00160529461271786	0.0273192603483259	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.38175026283024	6.5601241065601
Merged-chr11-89031349-7	31.7874087135328	-0.399735406978021	0.444549824901563	-0.899191461984119	0.368550687318621	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44351493034458	2.85715637332171
Merged-chr2-59055927-4	10.9644254585137	0	1.30106457021765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99221045-4	8.23432010753793	0	1.31343665577834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16828664-8	21.4465793936655	0.00116920804891951	0.356977829872338	0.0032752959738078	0.997386696582836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38503726147652	4.41842351129448
Merged-chr1-136117210-2	6.67599989855373	0	1.30406613229531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126588818-2	5.68681432031913	0	1.31154707740591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24492715-2	6.1331646513922	1.92865372653829	1.28951674279287	1.49564070208283	0.134747310501206	0.768579009703639	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.727201944460961
Merged-chr12-102506237-2	4.79436135167192	-0.171268614104159	0.705750383012834	-0.242675906703751	0.808256473263255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50736031769114	3.37109694546247
Merged-chr5-77387011-2	5.51011146684928	0	1.3232216723941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97273511-3	20.6202457139187	-0.479796808891933	0.460633330442851	-1.04160245727477	0.297596028954078	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91328719119705	3.01147994900628
Merged-chr6-47631751-3	5.95044261274447	3.18532349167132	1.1003211904407	2.89490334217369	0.00379275299970223	0.0528784377039774	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.34574950999398
Merged-chr4-53303667-3	5.05084725544379	0	1.32185439658837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-138885742-1	3.72905842254168	0	1.37657573123113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121603769-3	5.0052439026702	0	1.34211767507486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3854673-3	11.4183766883967	0	1.32194995218872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58453166-3	10.7953245475473	0	1.33608401973369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141057198-3	9.28293298191497	0	1.31325207281792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71300551-5	15.2483602299967	-0.138360044855321	0.501498592344753	-0.275893186875001	0.782630106993219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57033066770207	3.32762525854924
Merged-chr2-157108411-4	5.81554847448033	0	1.30842480942308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113805517-4	6.13863418156331	0	1.29911185556719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152686083-4	10.7460722554531	0	1.30616371355347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50849449-2	6.22527911115038	0	1.31943402871096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101185465-4	7.01383173583292	0	1.33265895180451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108448444-10	55.7040647497619	2.39591977447045	0.405514740015153	5.90834201089934	3.45568005101833e-09	7.23765604531551e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60359381921121	4.82313534824007
Merged-chr4-83433069-6	18.7585172795714	-1.40637719421264	0.44278665326762	-3.17619599379078	0.00149220098371262	0.025871415622628	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76512796228507	2.84191043294429
Merged-chr7-3442916-4	8.2872266105128	0	1.30524403020026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97312117-4	8.09249736052755	0	1.31130890442003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124373737-4	7.90458976507912	0	1.29561710555461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70621283-4	21.0181225782757	-2.05366323305554	0.408165647021356	-5.03144556148325	4.86795341812045e-07	4.57699689295682e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89846637846944	3.17773122292042
Merged-chr15-59106121-2	3.06068613508117	1.28616681042438	1.35588010535791	0.948584469483659	0.3428319928998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr11-3168654-2	7.23529530179963	0	1.35095490548338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55782058-2	3.36868483904324	0	1.34555454284764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76376895-4	12.2970634438545	0	1.28831210418821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48528685-4	7.84908279334912	0	1.30147969801372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28957984-4	7.95162176080261	0	1.31104341516822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-146967683-4	8.15611914423576	0	1.30656370636233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116145452-9	47.4668400785908	0.366460940205695	0.256935505534687	1.4262759809824	0.153788694940739	0.844564758349235	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00544423329336	5.35111083821512
Merged-chr11-83535983-3	6.876126974521	0	1.33920278828956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131094763-5	18.911564873815	-3.402145172496	0.676593897553674	-5.02834149819702	4.94740212236853e-07	4.61188215532516e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74582190159319	1.60454151879405
Merged-chr5-66138799-8	32.8198523864024	0.0934333794887087	0.306264651597898	0.30507399075026	0.760309799912837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38374025327022	4.6702743802147
Merged-chr18-46613363-4	8.23747526433817	0	1.30004556500459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52578878-5	16.9440954754317	0	1.28256212882968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128654494-9	62.1863367545711	1.18171267727113	0.317043902915736	3.72728403354664	0.000193554291168332	0.0053254731413414	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63711856914678	4.6139149306886
Merged-chr15-67300711-7	17.5591670860349	-0.0983817630530969	0.413431683589459	-0.237963772391452	0.811909192597281	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08591356409432	4.12789417520241
Merged-chr15-103552701-4	8.48912577919589	0	1.29604156175184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24617514-4	8.73325699830681	0	1.2988258087214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83729559-8	34.287802800655	-1.13076472329884	0.323238515892674	-3.49823634159454	0.000468345905038191	0.0104908902862713	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17124548913884	3.65137228759234
Merged-chr6-39372893-4	8.77876907181855	0	1.29250264967385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174674165-3	7.03353774371263	0	1.28829219233662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31612840-1	8.03755440001914	2.8792185924886	1.20333252629017	2.39270403615293	0.0167247260554657	0.163021173750069	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.17564474993106
Merged-chr3-61474312-2	4.00092973791585	0	1.32028411750913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83312660-4	9.50221536368609	0	1.30629373151453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112718249-4	14.7470250606902	0	1.31572073286232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151322111-3	6.9487853663509	0	1.31771718290067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65922667-6	45.2305219222291	-2.91506129942044	0.336154489088215	-8.67179048337939	4.253778333775e-18	1.54426332777145e-14	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.4144871289224	3.50110366846585
Merged-chr9-103345757-2	3.77009368836397	0	1.33414006925887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116845064-5	18.5173323356057	0.144383553650547	0.516708883211946	0.279429207318899	0.77991545918902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04783559466015	3.1299791692323
Merged-chr1-167517907-4	12.9459957298346	0	1.2913229568829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59390366-4	9.8778542862303	0	1.31324476424981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90475014-4	6.66490781746287	0	1.33588455299169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153492693-3	8.56253126763963	0	1.29328168984485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82751397-4	7.37951917652851	0	1.3064477194751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32071133-4	15.3869735581023	-4.38540169621888	1.05939933720888	-4.13951712276202	3.48037624330454e-05	0.00136758067345146	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23554002059024	0
Merged-chr17-40890339-3	14.5030538296569	-2.83752753899879	0.570775644707512	-4.97135357002286	6.64870706516477e-07	5.82394653994982e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12664280668726	2.24287124256397
Merged-chr14-26994545-7	27.0352915566454	0.207579486492245	0.324079479528776	0.640520303211031	0.521834393834752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80026764925384	4.91978899838664
Merged-chr9-24770545-1	2.03245521356008	0	1.39026300333585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106620359-2	3.64696285137588	0	1.39849111651981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45269099-1	2.12241579990538	0	1.4320162093465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144981866-3	10.7607799731414	0.106518931733883	0.550223093942282	0.193592259042941	0.846495159915215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64847486810871	3.19033506375913
Merged-chr15-101141286-3	7.4504720518098	0	1.29718056801525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181237533-1	2.13150918960588	0	1.40488625733564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104661628-1	2.88308939280376	0.396966609210395	1.10289158468535	0.359932576077863	0.718897555214995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0425828912036	1.35032549026822
Merged-chr1-24702521-1	6.47173727730228	1.40787662259742	0.634407110508035	2.21920057212157	0.0264730821759183	0.232618589760848	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80093038046909	3.1506388819879
Merged-chr15-35515695-4	12.1823367786576	0	1.30068873383698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57099837-1	1.9558659054798	0	1.48877610406651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165332807-4	13.8113944739058	0	1.29159464265294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4494343-1	2.06918811871698	0	1.38384834175308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101658503-2	2.92939074837396	0	1.45599690763388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20826184-4	14.5481949463519	-0.107384839758898	0.489979215867446	-0.219162030309361	0.826523831881595	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51219215380678	3.88277055085235
Merged-chr11-55452273-1	2.48003991979025	0	1.40442285775666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91475922-1	3.99291427011822	-1.6329913795618	0.955121123451219	-1.70972177189546	0.0873173347472622	0.559286272926348	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34562567336296	0.73596151290311
Merged-chr15-74918626-4	11.5150583712583	0	1.28379531982325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53541050-2	2.54947610760827	0	1.95868696118276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36222524-2	2.67417065916575	0	1.41052975302871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-81743941-3	11.7529372727945	0	1.29341803488869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132235384-1	3.82199436143012	0	1.3375206009733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115268467-1	2.04234488213704	0	1.38552713877029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-74297105-2	4.52898632826207	0	1.34095766793411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38765539-1	1.68785889947259	0	1.46996781416796	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75500384-1	1.61242811550201	0	1.78949894761273	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117385499-3	7.69915669935736	2.46400015650914	1.17406633439435	2.09868904705474	0.0358443208269081	0.292273894279403	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr8-125278447-3	8.02308905250232	-1.45427075845623	0.571782357930225	-2.54339914180021	0.0109779745081655	0.119183705301642	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0647615868752	2.3697525094638
Merged-chr4-149638179-4	12.3764462232769	0	1.28819130288523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60905450-4	5.77879264939316	0	1.31560868823793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79037813-2	4.29160169963511	0	1.33650355898492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52698177-4	9.39341592066742	0	1.2911043424772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32183247-3	6.88591632193934	0	1.3129020709387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143906615-2	10.1296006195195	1.23914849934435	0.690558911556092	1.79441388505447	0.0727471323286939	0.489722273529498	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79225051922025	3.21976063750012
Merged-chr1-139065398-4	9.40363995905642	0	1.30441688795959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54839238-4	13.2169943454435	2.51696325121368	0.729546662323653	3.45003737416465	0.000560508948843511	0.0120127969075527	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18325119812323	3.25999104303911
Merged-chr10-51414720-4	9.00277664046432	0	1.29605524863179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30502652-4	12.0724323185213	0	1.30031858358929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20114587-5	13.8878017064322	-2.46640366964043	0.584581383364881	-4.21909376491547	2.4528625405347e-05	0.0010340951972502	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54851220668564	1.87393143868528
Merged-chr11-97436076-9	39.1474503810158	0.891870734707419	0.333828718642759	2.67164172793006	0.00754811899834419	0.0888559510116735	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00329773080741	4.91166276033679
Merged-chr9-65741163-2	3.89617277940043	3.9593393481506	1.08339672574624	3.65456093235231	0.000257622476589404	0.00663563198865243	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.99834080004871
Merged-chrX-96107629-4	6.29693285184885	0	1.30761532982617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3744246-2	4.98355023876616	0	1.31954605065385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121224032-4	12.5186362670361	0	1.30859156737742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176847677-6	16.9778173726778	-4.348601153612	1.0125990535198	-4.2944945864765	1.75091753519935e-05	0.000794791135354186	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38381366510253	0.306240821987646
Merged-chr4-99225005-6	18.1435991547198	2.37448795137172	0.535599507919728	4.43332735796239	9.2789813405894e-06	0.000475564168378161	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32177574313757	3.87041704106699
Merged-chr17-80734875-4	6.07394231719176	0	1.29971510327471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54222523-4	17.5808934978693	-1.80094788223341	0.665005798615251	-2.7081686896318	0.00676556245658562	0.082053121778501	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38737402860121	1.35032549026822
Merged-chr15-5872250-4	7.03911344600921	0	1.29826225138462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103246539-4	11.4657670424618	0	1.29451444693402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164440414-3	5.74693230509119	0	1.36055468726663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-75108262-2	3.17299963635007	0	1.46476876902989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77271063-4	7.31521285602495	0	1.29684798466712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-93506106-2	4.28362974597988	0	1.33347999246844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93668968-5	21.6629252747099	-0.881036047094746	0.685582624928083	-1.28509097964256	0.198760493340662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20785463406897	1.40918939303534
Merged-chr7-125638965-7	29.6351742788902	-0.237563279148344	0.310032519508129	-0.766252777370714	0.443525910523477	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94056069122788	4.64122728954271
Merged-chr1-184020809-3	11.7224544025971	-0.0183357862688901	0.515457292283547	-0.0355718825659833	0.971623728589002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26864316683018	4.31284971441573
Merged-chr10-59268272-4	9.05470651365573	0	1.29202208195565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112323963-2	12.8091994022299	-1.70841687597758	0.434866656979853	-3.92859937306421	8.5442043341866e-05	0.00279025275573092	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98740605518184	3.2141966593083
Merged-chr6-81958226-4	16.2890919326888	0.211678246952191	0.540615291844417	0.391550609362174	0.695390287598591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29355349122025	4.31728133887733
Merged-chr14-78701294-4	11.2187908910005	-3.4533710468486	0.753606773791967	-4.58245754542793	4.59543026699364e-06	0.000271267376898795	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44340691116389	0.666688015277142
Merged-chr9-104271872-4	7.7890607198001	0	1.30559079429789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38861102-3	5.09822539940293	0	1.31541842785552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180945591-1	4.21044361509963	0	1.33611094039427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96476887-3	7.52067962178479	-2.78736939063027	1.05879789875341	-2.63257926173826	0.00847392480428624	0.0974717638199065	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88773418548469	0.306240821987646
Merged-chr6-72155846-1	2.64700567393465	0	1.42901027859967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15068330-3	5.253446783695	0	1.30483546830804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5805750-4	8.12359042601565	0	1.30803367748337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127717181-3	6.53791587041867	0	1.30610861147103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88285161-3	3.97517676784487	0	1.35323271681237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58401361-1	7.43811065008177	-1.20021439198531	0.943128638660373	-1.27258821626932	0.20316420223825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10915956774104	0.733321818366247
Merged-chr6-145341363-7	38.0774360243288	1.28412104041623	0.460154142524686	2.7906323593454	0.00526051866352608	0.0678015488336834	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55343951329892	4.1362678864151
Merged-chr1-155817766-1	2.17953044981541	1.61591430689327	1.52339822386589	1.06073007147968	0.288812589658708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	0.898163539755574
Merged-chr6-129344613-2	4.72430853667891	0	1.29942744622838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-109220552-7	14.917673196794	0	1.31666418808857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21711072-3	5.2290500082782	0	1.34601187844238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97737381-3	6.24791491434123	0	1.30213524505315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45088002-3	7.02627304898102	0	1.31128769189531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161713131-2	5.80476904093627	0	1.32048984320583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78916595-4	8.15297853063629	0	1.29411801401854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117989382-4	12.9153960900435	0	1.29881910806613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116972378-8	31.1212050044943	-0.353177188581276	0.357433382707093	-0.988092342988276	0.323107425423569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24707134425653	3.80581250207881
Merged-chr7-35026078-3	7.99516302274428	0	1.29594458356531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60508186-4	6.39216001388833	0	1.31126339660083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35765141-5	21.3001377327854	-0.145306057576713	0.292399703836471	-0.496943244709913	0.619229074840366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08439775846661	4.87694882902761
Merged-chr6-113691237-3	8.71635212602348	0	1.31397741284472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91916763-4	12.8129339378759	0	1.29285709476989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16250890-4	10.6176736306585	0	1.2918371106121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47023703-4	5.99858572212897	0	1.30813387712655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98357430-2	8.20247878091777	0	1.31032901641908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-65501025-1	4.1085947657936	3.22585564168569	1.21948043581849	2.64527051598048	0.00816256325342281	0.0944556150802492	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.900948542443349
Merged-chr15-25376568-2	3.93497243195206	0	1.3440926740627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5368833-8	26.3464483196968	-0.913596678396191	0.420186173751235	-2.17426639777317	0.0296851344131758	0.254400628637821	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33127953706801	3.15190559219896
Merged-chr11-8708836-4	7.91238036641059	0	1.29642591343017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-40790060-5	18.8192655086519	0.45758445338514	0.577219187388888	0.792739505862708	0.427929608196017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42095374518212	2.91720392291469
Merged-chr17-29245868-4	12.0152193565886	0	1.2932484109667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8807332-1	4.21095219892436	0	1.32554139760256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39226100-5	11.4985567278709	0	1.29994701993404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118487187-5	20.3484625282639	-0.677703313347221	0.404061276164496	-1.67722905738516	0.0934976990240955	0.589511833310357	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11017178708713	4.16650737783767
Merged-chr16-85139503-6	21.8522588694226	-0.00162374352501804	0.380109495387606	-0.00427177838154837	0.996591624348252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28246788973955	4.23111091847521
Merged-chr11-46373268-3	5.87808748216636	0	1.31422427678894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116088058-4	8.03019188242928	0	1.30467391310161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106973218-6	24.3553466142818	1.45937963035046	0.519767521561621	2.80775456297426	0.00498882329107799	0.065017879293734	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14611586522469	3.45006719736648
Merged-chr10-121297573-7	31.7859386451838	0.557647248080906	0.257818985263628	2.16294097779764	0.0305457195011582	0.260273906183686	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.245905600047	5.81254259115164
Merged-chr19-17255729-8	48.1555602059153	-1.75134300122788	0.333680072801106	-5.24856934525959	1.53284940642892e-07	1.77284207632751e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.95272820770471	4.92779789231298
Merged-chr2-154773217-4	12.2542702243673	-1.31618851988549	0.601540172570696	-2.18803095770101	0.0286673473754814	0.247397844902034	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51363090305378	2.61313103836483
Merged-chr19-32077676-7	22.9034105802384	-0.655979845668048	0.49424113599097	-1.32724655618312	0.184427136407342	0.961203992317289	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49527394006931	3.79306698568243
Merged-chr6-134366681-18	99.8501013723226	-1.29324589266952	0.215819865495128	-5.99224677349598	2.0696155043727e-09	4.67962265566568e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.49535893350808	6.20810315875182
Merged-chr8-111477952-2	4.26087665158704	0	1.32611032638637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35841729-2	4.68754211562243	0	1.31990807705938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46987854-4	20.9818598799564	-1.6169820379332	1.10698637325713	-1.46070636188185	0.144096042405782	0.804519821176368	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.893271302366875	0.306240821987646
Merged-chr7-89270660-3	7.63080919054511	0	1.30335494427646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67695021-3	10.2736162303437	0	1.29012852619558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61448299-11	44.9703099061705	1.24026678966517	0.31749383841476	3.90642790379114	9.36705742931135e-05	0.0030060721421669	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.422643823581	4.72062750083825
Merged-chr3-96227527-5	9.38991742054336	0	1.29036997870193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148495495-8	88.3020686862802	1.00340399323224	0.356645848981094	2.81344643740808	0.00490135509325129	0.0641209108956154	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04745624775792	4.55852510486885
Merged-chr6-136930932-8	27.7841469496741	0.269978340109871	0.368112649793332	0.73341228632443	0.463307007825292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80504381776424	4.86295419362112
Merged-chr13-62971067-4	9.1737058511371	0	1.29216536677785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16593073-2	7.68491622615063	0	1.30560017971378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117202383-4	10.3273039706879	0	1.28983391966592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37860526-4	7.54995419386228	0	1.29777106955994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113656141-8	31.7446534864402	-0.139375464743606	0.387392779787583	-0.359778168349005	0.719013030600616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05326842543694	3.3457163028161
Merged-chr1-107447776-4	10.7130347770023	-4.67129849143953	1.00738717937675	-4.6370438169856	3.53427510778223e-06	0.000221218476199208	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11055695258141	0.423054662900563
Merged-chr7-75681287-4	6.98454749650605	0	1.33611693689915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101367089-2	4.19354030059268	0	1.36910841051284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68732143-2	3.88658759270193	0.478009059832784	1.29313393796433	0.369651623702084	0.711642081132398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	0.581381506691384
Merged-chr3-27226957-4	6.69396035220116	0	1.31296480329654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31560148-2	4.97997125234443	0	1.33142165139239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47165296-4	19.6688503863757	-3.37957254442071	0.4809522111443	-7.02683648419019	2.11268707015926e-12	1.24374458816781e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.99995087273679	1.98003679573008
Merged-chr2-45840601-3	5.84337617689634	0	1.30270902542881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83637898-8	27.0749562846283	0.709745380939949	0.443850781275018	1.59906304299187	0.109806595355144	0.66587061804726	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47238117809701	4.19897149920794
Merged-chr1-191281414-12	89.1318021026836	1.84717855572389	0.226903867732002	8.14079801365754	3.92681021098892e-16	8.55337800157606e-13	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55850360879403	6.4201660871166
Merged-chr15-5708676-4	8.21382337875528	0	1.29426746115888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34198214-4	7.92009454027211	0	1.3017309520812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118495065-5	19.6838297787364	-1.62366553506707	0.384533876589452	-4.22242521118777	2.41687606868592e-05	0.00102554015314513	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69336500949284	3.98802484375781
Merged-chr8-95427791-4	7.08561071589941	0	1.29268796158505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23821126-4	6.77382184687672	0	1.29544651023368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-103970200-1	4.93052074329273	0	1.34050356988962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112282880-2	5.44309320003734	0	1.38544216510413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116807304-2	2.60595211619147	0	1.43104608452546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55784771-4	10.2280196032636	0	1.30008453641277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47883260-2	8.95969484469705	-1.05747393253929	0.618485198562491	-1.70978050080602	0.0873064700766929	0.559271502169549	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17048039509852	3.20013369860462
Merged-chr13-35941232-12	50.1383445510884	0.0172652828672056	0.333529843811556	0.0517653313115825	0.958715680102557	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82834860440278	6.01377420845938
Merged-chr9-119948986-4	9.67122828212939	0	1.29565594115842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-78865073-2	5.08609785840906	0	1.36665707461575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31572517-4	7.44510449040134	0	1.29723006648489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125334549-8	35.4498570102962	-0.244755524052568	0.309263293131046	-0.791414724892218	0.428702020099307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73360622834599	4.46982908479385
Merged-chr7-55869422-2	4.73556671289776	0	1.31688831432482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62724615-4	13.6284922809165	0	1.294217335767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138210818-4	4.9803714123136	0	1.33043000148135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130819016-4	8.67177207467401	0	1.31242132735903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92484682-5	12.1868005453923	0	1.28180191917069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99235164-4	7.8542446395382	0	1.29596020480489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139614676-8	24.3388303110105	-0.339681584091515	0.33542900253304	-1.01267803775571	0.311213971454904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84760444245159	4.39964869906036
Merged-chr16-31570971-4	10.0619935409424	0	1.29390181649962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78248612-5	16.8240023197743	0.937963245279589	0.544588222140234	1.72233479746108	0.0850088876263046	0.548478551622087	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44298921644681	3.06458233164114
Merged-chr15-77805949-6	15.6965629862676	0	1.28943227715269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17276882-8	26.5864081181955	2.15640876439427	0.604104647683674	3.56959472611677	0.000357533919593676	0.00852679252181327	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50200329760273	2.87695329383886
Merged-chr11-103320438-8	25.1794363676939	0.708796426272282	0.432547530491755	1.63865558420011	0.101285009132743	0.626877269064993	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46863661172483	4.29083880046866
Merged-chr18-32855294-1	1.47542347412411	0	1.65011161780847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11719372-1	1.54263588813168	0	1.4889391632183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40020726-1	1.4158623962319	0	1.58744829456654	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26133412-1	2.95232720766923	0	1.31962443141676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31166179-2	6.05426059760485	-0.842856053800364	1.09213984282989	-0.771747372219662	0.440264067337497	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54390853548481	0.73596151290311
Merged-chr16-57915379-1	2.5789062849316	0	1.40995514819339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35759922-3	4.34582521788724	0	1.36438270050679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10460405-2	3.11492716715805	0	1.52835949725904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182378600-3	7.35337907216758	0	1.29559889080904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87575914-5	15.7371766836109	-0.739959800452581	0.55721162780648	-1.32796905794215	0.184188329030133	0.960189114383972	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97171532244914	4.03907851755733
Merged-chr10-82973709-1	2.66801045231168	1.33552285094878	1.08839964615944	1.2270518973994	0.219803085720571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.866220529060937	2.15292080626044
Merged-chr13-37784431-3	4.17637449372362	0	1.34826749453459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41776980-2	7.13432572601899	1.17389735999321	0.841438154179736	1.3951083085097	0.162983181090056	0.878810046333097	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26539889078211	1.578845274708
Merged-chr1-165661458-3	6.07852910056608	0	1.33417978561085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53763079-2	5.44071388765125	0	1.32538268975065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102682429-2	7.98199285377614	0	1.33813702693749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17820655-1	2.04976349369376	0	1.39641552662374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111785694-3	8.83043961064564	0	1.29747379806958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16703049-5	38.8133729882509	-0.292936572397329	0.458862079370553	-0.638397866302586	0.523214719539862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60506445457708	3.09995409920766
Merged-chr2-150311066-2	7.92270526852219	0	1.3048354974461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25485040-1	1.84848771401565	0	1.44453014358067	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25330164-7	30.3361887815021	0.411943837826903	0.370044382878794	1.11322818798693	0.265610439340489	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03673913541323	4.22161307852799
Merged-chr6-128754012-5	22.6260432925694	-1.48378784275947	0.356536181040611	-4.16167536890304	3.15921247464269e-05	0.00126341431069768	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34616614873925	3.92044182304664
Merged-chr9-114648711-4	15.1569585517121	1.3256829949493	0.48906554875768	2.71064481707368	0.00671525170049429	0.0816247837835751	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94912852895031	4.21444889015399
Merged-chr8-126580965-6	16.7741946913326	-1.61096020428214	0.46276516236304	-3.4811613649913	0.000499244623338919	0.0109622443402907	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31069755706529	2.65647657108095
Merged-chr16-49929935-4	12.6800753413871	0	1.28473506750946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87459460-4	13.229741637618	2.17333811895317	0.648599158385705	3.35081859242985	0.000805730663593738	0.0160816359020148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25879078155718	2.607509710407
Merged-chr4-126017855-5	15.6308110904569	-1.01284447770962	0.580289657388467	-1.74541190733577	0.0809131944544514	0.529423611176588	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3462585536152	1.98485448024296
Merged-chr15-75085587-4	14.1176499923787	0	1.33516683145752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40640124-11	66.0104084116158	0.184983071986394	0.261767378280101	0.706669689713801	0.479771769789556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42672253355775	5.59755035187234
Merged-chr13-57973750-3	8.77879591344443	0	1.3043910182348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38806987-3	10.3596318866439	0	1.29751432182062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-42011078-6	17.9806703945498	0.953705404859611	0.38062548357745	2.50562678015107	0.0122234568059322	0.129248221430493	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8971445504188	4.81254491146842
Merged-chr10-20915840-6	16.3720004189046	0.887853920236107	0.406073619332538	2.18643585292605	0.0287837329696898	0.248105526658266	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82077914737093	4.43408329824425
Merged-chr10-100839678-4	7.82394358903053	0	1.30117008059211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23538452-2	5.01357186050431	0	1.31651629846722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135890071-3	4.81059008107545	0	1.31177078865959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55459934-4	6.7762691245781	0	1.31204009424916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131432106-4	6.46714462335604	0	1.30574433253521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95907085-4	7.77137148847627	0	1.29942831374721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29496383-4	8.70574937987382	0	1.30129655083482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25413727-4	8.7865381672456	0	1.31494761719941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113703527-3	4.64040466668619	0	1.32349778808811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32390194-4	6.2675880299375	0	1.30499969596799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53696045-4	11.789982734446	-2.88986673513426	0.87428935700541	-3.30538935648552	0.000948445429404385	0.0183093397429421	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4656025920209	0.683637474991079
Merged-chr3-144352819-2	4.72769294789164	0	1.3227106785981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23659631-2	5.32373223679064	0	1.40561483532916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62047084-6	62.7337853429212	0.780304799845422	0.372114537444273	2.09694790535368	0.0359981871547497	0.293126172936358	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63466105471151	4.31369260982167
Merged-chr2-128437270-4	14.5206625217937	1.19458574526034	0.444334857018747	2.6884808301455	0.00717779568757892	0.0855572860072676	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91681678107931	5.07371064906692
Merged-chr17-67585403-4	10.0305215762173	-0.567522189527472	0.552828907019673	-1.0265783542091	0.304619050874201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19155667146693	1.97263263868485
Merged-chr1-183600704-3	17.3096188564245	-4.10634964217274	0.967241381431833	-4.24542386316639	2.18180586190812e-05	0.000941692773132418	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.073852706875	0.469435083901436
Merged-chr6-134705930-8	20.3556956059001	0.683617762783841	0.358438235902289	1.90721216184703	0.0564931192294813	0.405714844397152	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1728307597594	4.89631648814533
Merged-chr2-150861262-3	13.8759515389094	0	1.29507168084542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44760388-2	4.4986745484605	0	1.31054168549204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75587788-3	7.59439150796276	-0.897344418376086	0.73961372993455	-1.21326089830092	0.225030087515973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75835072757087	1.82306449654395
Merged-chr5-135478981-3	14.2942517146095	0	1.29614934087396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26638040-1	2.12871513045976	0	1.58766709373292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109467443-6	18.919843711511	0.631752213556265	0.501286681729671	1.26026131669094	0.207575109770234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95830346186769	4.79345952914062
Merged-chr14-101516259-2	4.62538680821517	0	1.33724805083257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34134552-4	10.3925102845847	-1.88282459721525	0.733193942505739	-2.56797620392304	0.0102294177958318	0.112837868886972	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29951983617261	1.60588664266147
Merged-chr6-122633534-10	42.8014685848416	-0.625913779051222	0.251626499966975	-2.48747162613386	0.0128654715798429	0.133987324924435	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57104444000964	5.00416657509302
Merged-chr1-88265102-1	4.22645206550074	0	1.36840426622909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74505419-6	20.0724961491601	0	1.27693707453398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45031459-4	8.27621409172783	2.46936544470498	1.17767461948561	2.09681469214609	0.0360099824880308	0.29314916103935	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr1-95647068-4	8.6007357539455	0	1.29987393513836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116897031-3	4.9638279363674	0	1.35238813498788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33902131-4	7.95921868491593	0	1.32598582832315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3137443-4	13.5846253108715	0	1.29634350168344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99421377-8	25.0148851726324	-0.0489980489896612	0.306865329918995	-0.159672808272591	0.873138821898296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00944417306601	5.01940021276114
Merged-chr5-90661629-3	7.31706018564883	0.495903720971611	0.896163731588255	0.55336285490234	0.58001496881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19934448762808	0.845523456341755
Merged-chrX-49280128-3	8.18832156006028	0	1.28715487151715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70804145-8	23.8008656445606	-0.0423576969358135	0.344840422328556	-0.122832748695152	0.902239540909545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84092523000717	4.81555415263143
Merged-chr4-133690403-7	22.5152924811713	-1.07023994553246	0.510677977119024	-2.09572371138892	0.036106707195908	0.293456470509077	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56332740565632	2.16680051662379
Merged-chr9-85587312-7	40.0064247134324	1.58150277822249	0.35851075944487	4.41131189666761	1.02746190787517e-05	0.000516068607471259	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21690871842395	4.68814136374568
Merged-chr2-117194383-2	4.00902713916935	0	1.33460648423028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96188309-4	7.80874281410788	0	1.30446674174492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15269780-2	5.21980335800084	0	1.32786641919358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102878224-2	4.1973472167246	0	1.33252703956357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51429253-2	2.6273616296494	0	1.48722411235117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91234931-1	2.9577860907641	0	1.362944798659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87363108-2	3.51727382978151	0	1.37682163390312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191192601-2	3.00029227880628	0	1.41176593662007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136129545-8	25.114807594874	-0.113047934127954	0.308557905702616	-0.366375101848494	0.714085195956161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9058051511306	4.81810848456818
Merged-chr7-144991969-8	53.8767178908642	-1.48618495532691	0.334004329568091	-4.44959787571836	8.60312170762108e-06	0.000449743672884966	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28403408966884	4.82980114234141
Merged-chr12-86892520-5	18.1872912864462	0	1.28356106949579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-130231614-4	15.0933100855542	0	1.28977216380661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101310490-3	18.7694133085285	0.323262811737612	0.531924134793637	0.607723527835457	0.543370855788871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84820177026614	4.54474317690932
Merged-chr11-64496859-8	36.5527707332506	-1.89897569018565	0.30952089947097	-6.13520991128986	8.50468218009652e-10	2.22298784696235e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.14384196496214	4.11491015260068
Merged-chr4-141834705-7	32.1179961908986	0.340296594701938	0.307313441142597	1.10732740304722	0.268152400710757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96547298861336	5.19867966244943
Merged-chr7-126099215-5	10.3164414694717	0	1.30531044133721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80025870-7	30.9226044050414	-0.874865188466732	0.472079738245023	-1.85321486518164	0.0638515678576683	0.444066044404767	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65706394932008	3.86782085733762
Merged-chr15-31474133-4	12.3636894263468	0	1.30400387419033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41074017-3	10.2709966389578	0	1.29529247374869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37443062-4	8.51972336139602	-0.66885496946086	1.06858631347268	-0.62592507598869	0.531364086003315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850239143718389	0.688405034366054
Merged-chr8-46837189-4	7.49775218472003	0	1.28997106939101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104604854-1	4.25560424115727	-0.730192974774041	0.94913494023112	-0.769324722779919	0.441700564176378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28897309748994	1.41926493179619
Merged-chr12-79319881-4	9.74145056107797	-4.42649690486103	1.01698325009293	-4.3525760178022	1.34547196441451e-05	0.000641292567371483	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97485049401625	0.306240821987646
Merged-chr1-191122959-7	44.1582443461309	1.33437933983956	0.282469138861984	4.72398275158668	2.31270040639302e-06	0.000156283061795406	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95267862526022	5.26905003168551
Merged-chr10-10462628-3	8.90623669787952	-1.94662594249504	1.02642321110884	-1.89651395391977	0.0578921166140367	0.413630020483585	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02379777292741	0.61242769162773
Merged-chr2-6284903-4	9.99534549853879	-0.570372474646501	0.877975184076982	-0.649645325962299	0.515921347838815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29872927274038	0.666688015277142
Merged-chr13-100408445-7	21.7742784285712	1.06324793165784	0.408726596960028	2.60136712307427	0.00928530280550697	0.104767108368949	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64715845269872	4.76949634649957
Merged-chr17-71260493-5	21.5254737775518	-0.841878516523737	0.289201185351902	-2.91104794573831	0.00360218737133388	0.0506865925855262	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94153201155357	5.11563254688524
Merged-chr8-120564196-10	153.529417388696	2.25909094852254	0.342389556739266	6.59801359024179	4.16703078424848e-11	1.6976274702914e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81354166651672	5.0568425759722
Merged-chr1-176224046-4	7.52984513529375	0	1.29990240954628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-40402501-2	3.05254377427584	-1.27669792239077	1.25195274961813	-1.01976526093352	0.30783980233949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.787356202195084	0
Merged-chr3-115815689-4	11.3871963503001	1.85380248234926	0.74303370410329	2.49491035482229	0.0125988955180802	0.132017167460019	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10447297862812	2.61172714692339
Merged-chr11-50369623-4	8.02898199875212	0	1.29207006216393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9335482-7	36.9526067135957	0.84962146088054	0.340942899478771	2.49197581817785	0.0127034685977466	0.132889007914289	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51869199394299	4.31744465556248
Merged-chr9-70833287-4	7.55967433234206	0	1.3107954924304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91696362-4	9.72744595032833	0	1.30078847239448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34808358-6	25.4370180799072	-2.45765124206858	0.507864012785559	-4.83919155560703	1.303683479112e-06	0.000100106346211578	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51154924092656	2.99851835977585
Merged-chr14-59556348-3	7.66985482236246	0	1.30278553282584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-26041498-4	8.26933626340664	0	1.3320031551172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141047969-3	6.66955388588577	0	1.31005700779981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43569834-4	9.19896039595449	0	1.30275693803639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139743811-4	13.6411723376694	1.1896032912676	0.891503583791964	1.33437858567846	0.182079814492274	0.952159695727604	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.937105555727254	1.41959898789419
Merged-chr1-193852876-2	3.77374225021545	0	1.36768268574503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43865648-13	61.153398483989	0.873508947684739	0.232480766150358	3.75733856245033	0.000171730084534641	0.0048488793245751	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6780461823609	5.58632577468689
Merged-chr3-144692216-3	6.1313952222004	0	1.29538300366998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7914989-8	38.780329163818	1.03904122041138	0.412792180481676	2.51710490057964	0.0118323594512245	0.126010000114034	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8389955878834	3.7281193339826
Merged-chr12-35336521-5	16.659441105829	-0.839809875306942	0.376535383564904	-2.23036110804759	0.0257234793438433	0.227459605034206	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83901561517927	3.99241649899978
Merged-chr17-87531785-10	49.6419073590201	0.243426394886952	0.240347952340115	1.01280827449065	0.311151747619663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46374185713617	5.71155689317025
Merged-chr5-122911368-3	8.99727972797271	1.78032550677741	0.619683639858733	2.87295870386906	0.00406647267656115	0.0556148437678034	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90038955372074	4.81792391323078
Merged-chr6-108574113-3	12.1022812678366	0.141252598974343	0.405685696652428	0.348182349389955	0.727703242588997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9405477557056	5.03392928270404
Merged-chr9-25130583-4	6.24958526554644	0	1.31181133454786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50854059-4	9.91069616677804	0	1.29891610510478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94304558-6	13.509746567833	-2.60090334961389	0.595012109984006	-4.37117716761059	1.23578465653741e-05	0.000597289823713709	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51911671021881	1.99578006370328
Merged-chr6-29171232-4	7.15940216497311	0	1.29417571302495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6872812-4	6.99578450753625	0	1.29999534425169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142295083-8	22.2374165538008	-0.215147264737363	0.427721429666929	-0.503007915467084	0.614958707025658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60908745153865	4.67440831528411
Merged-chr4-141858764-13	77.7257759134094	1.10225447828835	0.208655842030737	5.28264374273294	1.27332856414802e-07	1.5183746049784e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50667702046511	6.64412366392041
Merged-chr13-42363326-1	2.27038288291984	0	1.438967296308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98370956-4	8.86044883393652	0	1.29348490175352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3159064-2	11.4398927675381	0	1.32903081140493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88251713-4	16.090003069253	0	1.29004040806211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113611066-2	5.82555137486084	0	1.31111362505575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65190809-4	20.8295551668833	-1.67919333489284	0.986030259148093	-1.70298357409804	0.0885711423975637	0.56548801867232	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8101380793915	0.563523181795778
Merged-chr6-113837449-1	1.90919159151762	0	1.60259196964002	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86492447-1	1.91737617232968	0	1.44354526863585	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129353960-1	2.21767070033525	0	1.35648812242914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152779238-4	6.32056603354907	0	1.30613440690039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43116963-2	2.45985482958369	0	1.43129324295736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126884755-3	6.28505841799178	0	1.2888376567561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185224386-1	2.70154633914154	0	1.33782319313424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134533032-1	5.67940388048993	3.03456576331988	1.05017380533604	2.8895843220436	0.00385751535622023	0.0536173778701299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.782001200233288	3.26008002381647
Merged-chr13-63148292-2	3.05001603988746	0	1.41008511490649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6909834-4	7.25528757646179	0	1.30033218725145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143035587-2	6.69728086293138	0	1.30642266447873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53011467-1	2.87047622520081	0	1.34899350485748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170703136-3	5.02342235860697	0	1.31216995821294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17601132-8	27.1249293760758	-1.167430089579	0.327484544142331	-3.56484026639014	0.000364077848297591	0.00862931848924714	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21458465652253	4.0048660043065
Merged-chr6-87153158-4	6.24793055944669	0	1.31342372270334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65749998-5	21.8238553817166	-1.7874202323003	0.508948344869061	-3.51198751370368	0.000444768894764941	0.0100776242015637	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30077212054866	2.16680051662379
Merged-chr12-87407001-6	24.4730884577291	0.774547330992582	0.389205108426692	1.99007493535628	0.0465826814015327	0.352110109758769	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31884373975219	4.19232767572531
Merged-chr5-3503940-2	4.69804533108461	0	1.30783481690954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49827575-4	7.97019683084645	0	1.32159487456545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27716451-5	28.6093172765107	0	1.29816674718543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102907145-4	9.49481959770589	0	1.30270118171972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50397242-7	14.5718583105966	-1.96328126179214	0.631591595148391	-3.10846641543871	0.00188061018576656	0.0309937839089789	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63107847374442	1.37490486545505
Merged-chr18-64991669-4	6.56511565100517	0	1.33777184693878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-63567261-4	10.1142038365485	0	1.29653798977174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80035054-20	115.550012321119	-0.359858862123649	0.152237319848517	-2.3638018751363	0.0180884832041489	0.173315252706498	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.9649937354441	6.54653422983502
Merged-chrX-102008133-3	8.35797291473865	0	1.28936566885998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56466676-7	24.57371888293	0.278422833501636	0.367056498174282	0.758528550472463	0.448134627863304	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33214038634484	4.54890536774039
Merged-chr8-66393118-4	7.27501418133335	0	1.30189157621705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86740233-3	6.46740434047998	0	1.30594523621398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101995026-6	34.6214270747814	0.493111903009569	0.36665651646722	1.34488787424471	0.17866144664297	0.939192941370043	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18817915879591	4.65947747767
Merged-chr15-79694700-6	17.1924125338332	-0.520654284323724	0.493890292716016	-1.05419015518715	0.291795866413218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64251180902477	3.12097634090368
Merged-chr10-34113477-4	14.5072361657347	0	1.29724413053035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45786892-4	7.7712856181253	0	1.29539960309143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21785952-4	11.7086057219506	0	1.31103068870556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74804015-5	29.504668723213	-0.0138820423627727	0.489070609485051	-0.0283845360844507	0.977355457649762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01873555280601	2.63929222501099
Merged-chr18-60932434-6	15.6414926140338	-2.16287708313542	0.559477959026986	-3.86588434492929	0.000110687385364756	0.00343446243306995	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70089661822665	2.22281280114811
Merged-chr17-71504013-5	18.1460710267495	1.60944830934111	0.613198290003439	2.6246784043251	0.00867308426484771	0.0992559307129139	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93864166308331	3.19929905941661
Merged-chr3-109130347-4	6.38384632081962	0	1.29682525978507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-98999329-5	11.1506164957126	-2.8232882894638	0.892059047620126	-3.16491189344012	0.0015512991847302	0.0266555867802734	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42554488970347	0.733321818366247
Merged-chr13-20120876-7	26.7867295938652	-0.716100960957402	0.364011584842134	-1.96724772171183	0.0491546587904924	0.366338997869926	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07178540923907	4.02076924367451
Merged-chr11-31877781-6	21.6419425952626	-0.341824433638013	0.466169036828077	-0.733262843804184	0.463398132488437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80339999982556	4.37375984762532
Merged-chr4-45286546-1	6.15402005642024	-2.01169264952762	0.735994165073247	-2.73329972572189	0.00627032435419909	0.0775730055375792	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85277533214991	1.81495750800846
Merged-chr1-87035945-3	13.5990108513606	0	1.3044125015023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53863646-4	7.22794477565626	0	1.30129001842798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6456272-3	5.48632637375394	0	1.34645742042866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16058015-4	12.6988558416116	0.341144268201321	0.634970718540429	0.537259842446734	0.591088140144901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49129894275241	2.39265944137668
Merged-chr16-84584106-8	30.3248327079549	-0.242170356562285	0.354755649921011	-0.682639886401261	0.49483442363358	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18336583280905	3.30892476039242
Merged-chr10-98572981-4	6.21659158232807	0	1.32009529202198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64180367-7	23.6337853042007	0.259376558981313	0.348534061696486	0.744192856556975	0.456759809054538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92563228443138	5.2470801810158
Merged-chr18-70437646-8	21.9674481044004	0.809693475277832	0.341378398332763	2.37183570850483	0.0176999591069842	0.170492560112764	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92842138640073	4.74487135735738
Merged-chr6-31075944-5	12.454253849149	0	1.2838197833169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156253073-3	20.7140592002935	-0.94839382560607	0.643653903590625	-1.47345307830101	0.140628907079717	0.792064864853575	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98200869271189	1.428339764855
Merged-chr10-93909201-3	9.44605490444753	1.17187284575748	0.617051414106659	1.89914943709199	0.0575448306170379	0.411718299202951	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65999938018915	4.34733622001446
Merged-chr14-44047955-2	6.99506745481742	0	1.31993851427491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140674470-6	21.3535204852721	-0.321664641405279	0.401926212503056	-0.800307696783606	0.423532544791534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38780599002686	3.9846370973059
Merged-chr9-40781703-27	183.09667881829	0.357955542851849	0.206516808774164	1.73329979761256	0.0830423967329236	0.539518538856764	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.36976556852086	7.69898196931383
Merged-chr6-34373956-5	13.7961703394127	0	1.28128324103657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117908401-1	2.72144185394412	0	1.35208560103078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73492437-1	2.85315797349936	0	1.3543215554479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106770943-2	12.6509005092966	0.289163371919368	0.664307153678992	0.43528565109973	0.663355098803593	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44225985441451	2.00098049458557
Merged-chr12-119082459-2	3.56787795547435	0	1.46061805725702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88866656-4	11.6406950268642	0	1.29242839612162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106612257-2	3.85414552479119	0	1.31846411179461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15933114-3	11.9879192813021	0	1.29713855938076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-61722581-6	16.8142855295023	0	1.28077774970115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-39197130-7	28.4974532859332	0.520803951022048	0.351722064751649	1.48072584354293	0.138679644383218	0.784466762626882	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22157510411809	4.69458950760868
Merged-chr7-92879727-3	6.5570621545956	0	1.30645248675541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64127011-4	7.04565912443107	0	1.33116636727883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173770856-4	11.2882830831542	0	1.29449005550693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52587984-4	14.6513244760201	0	1.29142360112769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107564810-2	5.71876229492655	0	1.35811217518342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57570499-2	9.01784551828104	0	1.32303207184811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134460496-7	34.6085735398319	0.217202302791172	0.293983351841889	0.738825179828511	0.460013159822635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63773621050701	5.88192677329508
Merged-chr5-138694891-7	49.8110129665318	-2.09901716000364	0.37069617854041	-5.66236525088652	1.49300607640153e-08	2.50801992464099e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.59313671148893	4.1740366319613
Merged-chr8-80314093-4	9.80448577003216	0	1.31241543867394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128643744-2	12.9582432981333	1.61594735685202	0.576946371607947	2.80086232685438	0.00509662571713125	0.0661589400301269	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32894796131914	3.95486718963327
Merged-chr3-41405025-2	4.41870280235417	0	1.33322139438068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118202760-4	8.22632237507495	0	1.31164648750029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120159293-5	11.7026568304924	0	1.29471574852994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43737722-4	18.6091801886264	-0.372828015677264	0.419574145193838	-0.888586725249768	0.374225227943086	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32391969495833	4.96950346501364
Merged-chr3-146584148-2	6.35640775755332	0	1.29515441637517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81101430-3	6.21980521623219	0.112494260820367	1.32606406983001	0.0848332017884987	0.932393997463085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr1-154794816-4	11.1358777107283	0	1.2886739565415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46497718-2	4.49759318696101	0	1.33864130586305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126086392-4	10.7262279901059	2.27785483859561	0.786101085292686	2.89766148554228	0.00375956135699011	0.0525052995156819	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892005523365874	2.71797405654368
Merged-chr6-116037446-3	5.17530345013278	0	1.3163638735478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112774463-1	1.73688333480834	0	1.47394216740484	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51908729-4	7.65759072365581	0	1.2939484549604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10968040-3	9.16271301242393	0	1.29943945744876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25592260-3	10.8034266223075	0	1.29750824284757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133615662-6	36.3332436505099	0.450042536421406	0.395348649453398	1.13834342685533	0.254977107077354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.90492764637458	6.29235213514987
Merged-chr3-96737534-2	7.85489232012213	0	1.33842872101983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132799934-2	4.67185508402684	0	1.38078869936164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83125091-4	9.06608926072038	0	1.29069965972183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-133986354-4	14.6923879695738	-3.137207326483	0.607659746014873	-5.16276970304071	2.43322425864198e-07	2.58538979520681e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0588939287324	1.7821740460218
Merged-chr14-13356172-4	8.39609447803897	0	1.28912252089423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92093923-4	5.80248409199122	0	1.31391837283503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91274684-2	8.49152371045276	0	1.34466292302401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13774894-2	3.9241316192133	0	1.32597378800156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105748438-4	7.44181619608545	0	1.30770267274962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4199040-4	10.7733579361234	0	1.28535460820394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16110837-6	22.7892012243204	-1.99196214666697	0.468133515396058	-4.25511543428309	2.08941192087545e-05	0.000910625465843398	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13456750592662	3.14637975729418
Merged-chr4-34959659-3	4.42963734027382	0	1.34999662121877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105016421-3	4.25884060603307	0	1.32558224412021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124001104-4	10.7943427741888	0	1.28945037093471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70549460-8	22.5729239871297	0.939345427270871	0.318001706997691	2.95390058166477	0.00313785074758965	0.0458921206248866	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0711634323791	4.95626175445348
Merged-chr11-70795700-8	27.519157543017	-0.111792623881732	0.359284635306476	-0.31115336670707	0.755684032491594	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66705285316575	4.54035181441239
Merged-chr3-15194563-4	7.52757163179347	0	1.30642623135267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58479147-3	6.64442513414476	0	1.29542331699092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119875024-4	7.16236087588573	0	1.30178389494586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50522658-3	10.4085013949823	-1.42674235267459	0.610521373881195	-2.33692449390351	0.0194431104925398	0.183382470281169	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92935155571047	2.31447273151311
Merged-chr18-64598093-2	3.28828709111337	0	1.37753889258053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142610786-2	3.13487581449457	0	1.38626885496522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-150626426-2	7.16989903297683	4.50715966259058	1.05650057595154	4.26612134927723	1.98900621900408e-05	0.000875243100249431	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.64801318249997
Merged-chr12-102296577-8	36.228211318514	-0.0878821514749091	0.345933728032849	-0.254043316257859	0.799462094000884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95616211916285	4.77018532568746
Merged-chr16-93818895-7	27.3771711012783	-0.445132611953571	0.461590402089214	-0.964345467190927	0.334872752750992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50617074979164	3.15813062208874
Merged-chr2-103683086-8	35.9929123694333	-0.816472998684032	0.282736664156176	-2.88775069593746	0.00388007269485946	0.0538452240850187	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52592436935654	4.6961885977728
Merged-chr9-40397303-6	18.2199208555275	-1.121638992797	0.405753646019716	-2.76433496975279	0.00570389517021283	0.0719410796743346	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63490812504414	3.56711505654863
Merged-chr17-27587454-3	13.7950138153235	-1.11941044606071	0.64401779915318	-1.7381669381384	0.0821814028890082	0.535350065710578	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51749915725168	2.73752739441368
Merged-chr2-181276215-4	12.2346638209421	0	1.31785269697489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70472846-7	25.7870441296516	-0.394356286068326	0.318087607281653	-1.23977255649303	0.215059531580031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64799633219722	4.22503585887017
Merged-chr16-48829257-3	5.28948749115914	0	1.32588621928653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166976576-4	9.09276570392568	0	1.30267359620805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107823277-2	9.2966362409965	-1.76423722409876	0.547824853465054	-3.22044027929687	0.00127993857466602	0.0230283221641315	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3784294364567	2.31387409893957
Merged-chr19-47432551-6	71.5997300413422	0.695281328559935	0.376965478002358	1.84441644960281	0.0651224718304575	0.450459727345514	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91152873846827	3.21006948081922
Merged-chr11-5732934-6	16.7496552165429	-0.480719910916118	0.579102987603476	-0.830111260357159	0.40647588118263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13881754297959	2.37705875126183
Merged-chr15-67355505-6	19.9883319509475	-0.584933038355942	0.486136942829179	-1.20322688284457	0.228888534602551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39329880515731	5.04865566665339
Merged-chr6-128799284-15	76.0579773008917	0.797610776467034	0.226007623348208	3.52913217992723	0.000416924831576911	0.00958633710211993	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49524836156462	6.29810509327197
Merged-chr7-98809622-7	47.0503277594129	1.76124887785563	0.45850194835934	3.84131165452604	0.00012237861851727	0.00372124393002771	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91733325170641	4.32021032761234
Merged-chr8-10835285-2	5.50596269720654	0	1.35717447833701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80263097-3	6.50604749088064	0	1.32956159005604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79978319-5	24.2104005408312	0.384843862881635	0.314092623448587	1.22525597276444	0.220478791175829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59228302321013	6.04283703820231
Merged-chr1-191447598-9	31.0964634205454	-1.55621259924993	0.385558483710998	-4.03625562656902	5.43110397177819e-05	0.00194253377197492	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68052709197843	4.03650898109611
Merged-chr10-88334124-4	7.60539423509414	0	1.30733057908727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121927593-2	11.5631929965424	1.64945423154099	0.692691853600541	2.3812236609501	0.017255231695659	0.16699650035316	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90538776756581	4.50451656688147
Merged-chr6-94269364-2	3.33699150584506	0	1.39555397447112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105894175-1	3.85231684268367	0	1.33966352942523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9952954-5	13.4834773056823	0.354478676271388	0.602191235663808	0.588648016241284	0.55609741643607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20863040113748	2.17585887006086
Merged-chr8-38294491-1	4.03029249216785	0.416994797313575	0.738615592243133	0.564562678736833	0.572371256301453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09775266575621	2.31742847155177
Merged-chr3-144604429-3	5.82591892767107	0	1.33925870422735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95906350-2	2.35218809767291	0	1.57001250616822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120868618-2	6.09977871822803	0	1.3289198601818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115729396-4	20.8655546269331	0	1.2844878439813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37098654-1	1.95309384356207	0	1.54315392257169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16869834-1	2.99633466750517	0	1.34026792532666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59960293-3	9.67538336070162	0	1.28582198341584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33514737-1	2.13839965867744	0	1.42887460300644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22672027-1	2.35419439117613	0	1.39349662392334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154942101-1	3.72913097044538	0.646291063881468	0.722389972701281	0.894656748161591	0.370970606230419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61261640201294	2.88814060540402
Merged-chr5-114766635-4	10.8009672899095	0	1.28867083153487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51316475-1	2.56005349435552	0	1.43913362370858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89776245-3	6.04976354546033	0	1.38178089829217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70753152-1	2.40864107919796	0	1.41489925381296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24593687-4	25.0151031351913	-0.5206751874903	0.717810437210858	-0.725365863323816	0.468227609519236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67751383513065	1.31470332505763
Merged-chr16-33178595-3	7.43415933500685	0	1.28670652835995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39060329-4	13.7264674683333	-0.711774307757373	0.557479368124669	-1.27677246630982	0.201682588876975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32752317926993	3.52096057460152
Merged-chr10-111509400-1	2.32325864991962	0	1.47957169499339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59396881-3	7.64943933826123	0	1.30016618417043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46869687-4	9.26098606350481	0	1.29494843315322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15792947-4	8.42253605901895	0	1.29487751956479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109214246-5	17.470185805776	-0.108588955402733	0.60492609968101	-0.17950780344904	0.857538990584233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27621720528052	1.57074540165941
Merged-chr18-50014704-6	13.8860890578425	-0.51930386312826	0.459869250550133	-1.12924241511479	0.258795585506888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85963439645104	3.21942711688408
Merged-chr5-106709747-8	23.020728907881	0.187850890818651	0.365628905842535	0.513774725731212	0.607409500386249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26260957635664	4.42285777157871
Merged-chr3-139025250-4	8.05051051498285	2.78860109999098	1.14031734826242	2.44546055906294	0.0144667270755392	0.145886226462683	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.0023426291647
Merged-chr17-81706321-4	9.07881627749678	0	1.29620016105103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13438084-4	8.24213851011949	0	1.28467698895717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73374483-2	4.44464449211654	0	1.33232059243679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52851021-8	24.4578938149455	-2.58571368269368	0.479026880593557	-5.39784673354812	6.74454437658286e-08	8.87017690331548e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07193174976431	2.18481160569239
Merged-chr8-66394380-4	7.14365012111744	0	1.29128218670185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72595494-2	4.31436801914085	0	1.30941653413642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107869912-4	6.98043317114791	0	1.30310805565109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53397464-4	10.4149998439027	0	1.2978494341825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24338456-4	7.07887577144035	0	1.31146574488876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104042865-4	6.06916242906209	0	1.30403069835912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136466118-5	16.0471439151695	0.558752932703394	0.461856400892759	1.20979796236089	0.226356428309806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73577189734089	2.87713409917773
Merged-chr10-99451401-4	11.9793783359376	0	1.2972354746883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98069452-4	10.5087234511107	0	1.31468458213672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91461570-15	94.2039339517837	0.561954877081697	0.218955128718026	2.5665298656027	0.0102721778950953	0.113194896582277	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16030947332034	5.70577448391155
Merged-chr13-91631626-5	20.1129493997464	-0.538253491520753	0.521304157073579	-1.03251333068649	0.301831706015426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43575538134696	4.92223933358191
Merged-chr5-65984265-4	7.34853589539151	0	1.30850956619116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27759044-3	7.3529224728117	0	1.31478566613369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89346261-4	7.4242480148315	0	1.30752808727337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37613128-8	21.607141362738	0.404067645914791	0.334577813875974	1.20769408238341	0.227164955077566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37976110605613	4.73395222736221
Merged-chr9-96525297-4	7.72181605518117	0	1.29776150599955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91694900-4	7.25648739459891	0	1.30561521856838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134513983-4	8.57172161881831	0	1.29218035730786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80207419-4	11.4587880238454	0	1.31034268123666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-8660722-4	9.38905005402904	0	1.29347898197323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93817126-7	32.8264886105394	-1.07418100449153	0.273158221580226	-3.93244983906167	8.40845291976324e-05	0.00276109931906959	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98146514988837	4.80558892764213
Merged-chr16-23346969-3	10.6676790369402	0	1.3123541445589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5074793-1	4.60837044578238	0	1.36132295025985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12656026-4	7.63117607999101	0	1.318000361965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159144875-3	7.00722026771917	0	1.31468183049654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115530694-3	5.10163740104602	0	1.31804996221919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23231974-1	2.47654476451512	0	1.45605120086735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127035716-8	47.2232797212376	-0.067695645318939	0.303250844399951	-0.223233163465348	0.823354042389104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34441088121761	5.24094127553393
Merged-chr17-44789129-1	2.73337411878615	0	1.43125068300578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118723135-2	3.57612445879886	0	1.32424758498262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19237877-2	5.97915387743501	0	1.31536493582518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74617555-9	41.3282547032831	-1.26727135126452	0.384284140939857	-3.29774564249545	0.000974643811595666	0.0186881087184655	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7303614950601	3.43953623156434
Merged-chr13-31225605-3	13.130125781374	0.183011381217678	0.42783318503871	0.427763407836443	0.668823380412032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02831962885205	4.19022273235339
Merged-chr6-87518837-8	26.6173688560337	-0.441989998985847	0.380687761255196	-1.161030229941	0.245629606034085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64164920366712	3.6134825001831
Merged-chr2-48768007-4	11.2584889441795	0	1.32006953550379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47068528-4	23.1927724147682	-1.11797416055449	0.405168446740192	-2.75928239118623	0.00579284532039206	0.0727864598946511	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01568750849326	3.75750484009742
Merged-chr2-153557600-6	16.2027685463796	-1.43544316995137	0.567626722231593	-2.52885058742125	0.0114436731806241	0.12285169503221	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09294418211917	2.58266972154474
Merged-chr14-76687215-5	16.3959413820466	-0.143334442970445	0.663458176043586	-0.216041414735733	0.82895546546391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21980951960692	2.38345539793716
Merged-chr14-45047549-5	9.54653903035959	0	1.32785221602841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104382074-4	10.7420689606904	0	1.29131651427499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-123580308-4	11.4093606705111	-2.75573855098469	0.712015930740976	-3.87033271589424	0.000108686916489864	0.00338579787746987	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59104192903911	1.26514550294121
Merged-chr3-78312912-2	5.34293635168842	0	1.3266540654789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18765809-4	6.83807190958458	0	1.3089524399492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77967089-4	15.8968577092947	0	1.29451595274822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121374348-4	14.3138716993702	0	1.29110664814661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72815971-3	7.2298267692071	0	1.31183317961103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106929704-2	3.95033029353662	0	1.31433123891578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69254601-4	10.4587538444004	0	1.31066562717956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-39341174-1	1.36438421287079	0	1.68513018307813	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32159437-1	3.03692537606864	0	1.33728128919625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125872780-2	4.66471360530253	0	1.33796864074012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103557302-3	3.96128282042005	0	1.38466497357795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106199952-4	7.05728673125505	0	1.29705683875412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51636338-4	7.83695538672626	0	1.29744211502886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4204007-2	6.38906620355999	0	1.31341638059706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101767424-8	22.3163905224839	-0.829091482455583	0.499881853568832	-1.65857487431562	0.0972014882582111	0.607414024263275	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57521051321424	2.62053038764832
Merged-chr14-58309037-4	8.09382665965539	0	1.32666084214201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41051726-6	16.4972477491961	-2.29670776334204	0.561302891452704	-4.09174404464218	4.28141060184776e-05	0.00161438578873828	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3883647237255	1.486851288245
Merged-chr15-100447153-5	20.2019682194452	-0.300414141002015	0.341112700305155	-0.880688818485116	0.378486270433643	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53767345214597	5.25498231494798
Merged-chr10-94360883-4	9.80439164997667	0	1.30503783349887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63014857-4	10.0439054919969	0	1.28461992635325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93977234-6	14.0102590963585	0	1.28916039765421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52767463-2	6.46259266377172	0	1.3237020390082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91021249-2	6.68600338768147	0	1.295052701149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123927416-4	9.74108429395042	0	1.30278895263213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80018816-6	26.3934225869923	0.941508939443986	0.372106857399798	2.53021120337058	0.0113993885105794	0.122537332063221	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22234929692171	4.26676837753353
Merged-chr11-34737379-4	5.70761541747961	0	1.31564077846995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102009843-4	12.1043690507574	0	1.29377600374248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38110821-6	43.6414224906009	-1.05187262706866	0.3241507040311	-3.24501108277013	0.00117446052619454	0.021491542297594	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20711226099862	4.19239491248087
Merged-chr2-156295921-1	5.86205410107891	2.55569248098935	1.01561673686751	2.51639460853306	0.0118562353687168	0.126202566607618	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.09927897987273
Merged-chr5-121824317-3	10.2757621858664	0	1.30259406550033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25242580-7	24.479362011297	-0.271773432689643	0.396157868488718	-0.686023058752858	0.49269856775449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62686635538049	4.46647248825746
Merged-chr19-42072372-6	34.9096217276217	-0.124092948615613	0.329039260335824	-0.377137209975982	0.706071639802515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28216614264867	6.15906651355417
Merged-chr4-43558827-4	7.08068985491043	0	1.30950560870431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8981002-5	15.2635590531697	-0.0906180246487869	0.530504704510212	-0.170814742788096	0.864369436379712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84045461195056	2.91991443973346
Merged-chr10-34532828-3	6.40376839493006	0	1.31631917467708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99046662-7	21.5853602683218	-0.35409080477507	0.33124890978147	-1.06895689108432	0.285089094798417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26296700909672	4.8210232503748
Merged-chr15-93270442-4	9.23800805046898	0	1.30046151746799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128596527-2	8.94625659522547	-0.172481068374401	0.609838862551204	-0.282830562245316	0.777306725159885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66131597284844	2.93598370173519
Merged-chr16-92038150-4	10.7612530960059	0	1.29881734808369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113515268-4	6.50669465306139	0	1.29468480967894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14998771-2	3.70215651493311	0	1.35302599601845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133940623-2	9.6327749012	-4.82687861862668	1.05959255637148	-4.55541008626567	5.22834765453818e-06	0.000299957511706279	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07337396745016	0.423054662900563
Merged-chr4-56891900-4	11.6427757226778	-3.97457067066311	1.04608269770793	-3.79948036553114	0.000144999798964986	0.00425085547921308	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20388264172461	0.61242769162773
Merged-chr4-147814691-3	7.90862309766166	0	1.29343287477714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6518774-3	7.46857160484766	0	1.30180452865274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28793143-1	3.60185973188696	0	1.326100375025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100944515-6	23.697264941499	-0.24771502832963	0.44975096904834	-0.550782645013057	0.581782682554599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24079940308289	2.59112047591875
Merged-chr17-26487422-6	15.9557347294714	-0.623779179001151	0.433441355501206	-1.43913166356692	0.150113222378279	0.82946885079748	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30529601619411	3.7936567109409
Merged-chr9-106341432-8	27.9552679358959	-1.05531956173489	0.328413722599605	-3.21338448765587	0.00131180552604048	0.0234211048919785	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53233178669736	4.20379199510752
Merged-chr7-101851900-3	8.11392327298687	0	1.29409611912386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32115393-3	9.82771233849489	0	1.2926023924751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21630789-4	7.25557738494283	0	1.29222255486443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132212157-2	5.6549869424618	0	1.34203112141704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121808452-2	4.55665514044512	0	1.30298206695255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31808212-10	50.4120280497476	-1.63867105311497	0.36469693884148	-4.49324049255931	7.01474898125948e-06	0.000382306744728425	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28701187552146	4.52043391845485
Merged-chr2-130729460-8	37.444783703103	0.86457931644813	0.238427863543799	3.62616727591198	0.000287659051377684	0.00722975706589466	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21186541136182	6.05414193191784
Merged-chr19-37495406-6	27.9464667580642	1.06071762793794	0.416771891893615	2.54507957126988	0.0109252839110856	0.118769522950225	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72750911322535	3.80446783493042
Merged-chr11-62609234-4	7.14050293027759	0	1.30304023437342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-51892793-4	10.3027222823978	0	1.32673919773161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110038103-3	8.83851828953651	0	1.30182318329181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40663262-3	7.43235449835213	0	1.29178771412406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37386392-2	4.07769021396342	0	1.33268202977428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29259696-7	26.1639673719527	0.580638698475447	0.307020213719183	1.89120674317076	0.0585967515636751	0.416815809799461	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85354209143139	5.37197300520586
Merged-chr4-9097218-3	8.04759172418015	0	1.30707287607412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24651333-7	24.9762896274884	-0.238107877493348	0.398170212195076	-0.598005250520076	0.54983642968736	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69989900552693	4.2624066277417
Merged-chr9-21602147-4	7.21512514909671	0	1.30433626291391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21853756-13	41.4883161627834	-0.217968158664093	0.276039513276253	-0.789626659158596	0.42974583435223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62576008106808	5.17817131723123
Merged-chr1-193897013-4	7.02885393067223	0	1.29778913418239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61224455-7	28.7897424127237	0.537761915529317	0.36747387638573	1.4634017547545	0.143357478813689	0.802483657339338	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63233370634197	4.31367855662167
Merged-chr16-76410511-4	7.13532864075399	0	1.32114556566469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86787318-1	3.01520441192467	-2.62062781505086	1.20964764375194	-2.16643898625099	0.0302776575165523	0.258394124079486	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76095652643655	0.469435083901436
Merged-chrX-53005119-1	1.71938902394544	0	1.48962611611148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96878992-1	6.66734429879814	0.770029867804697	0.719174759524175	1.07071314392926	0.28429843092666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26874863652572	2.56788313220855
Merged-chr4-35980800-1	2.99504768974485	0	1.34968362372096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34112108-3	3.97076604717644	0	1.4129399087117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83957112-4	7.65759944337705	0	1.29996153481218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35333896-2	4.28898811211992	0	1.38178931313453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85304469-3	17.4110751345892	-1.05425680824411	0.590040636385263	-1.786752883162	0.0739774376721725	0.496317211717227	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09688631789662	2.15258675016244
Merged-chr15-102283066-1	2.75431217321703	0	1.36440872292676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122693915-1	2.33606192439799	0	1.40079805251528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5239454-1	1.90827011955601	0	1.38715740240212	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131861113-4	12.5484374626718	0	1.2909841947037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21022015-4	6.85123983610343	0	1.32763017968793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6241074-1	2.12301589322189	0	1.43894138272414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100175175-2	6.04972614900125	0	1.35031187168294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46186719-1	2.20216225693654	0	1.38922154470773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-7374710-1	2.47391066991391	0	1.39371997405873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105060231-1	1.93757287241139	0	1.61216210640412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99396748-1	1.7407414526811	0	1.48355315742677	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-65950-1	2.75853159886533	0	2.4332524796049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73956652-1	1.86223391594899	0	1.43725151357136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47259183-8	18.3075334657924	-0.238533378648014	0.394409187166494	-0.604786567883169	0.545320819660548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95146905473865	3.61623826364322
Merged-chr11-62007587-4	11.1412573620558	0	1.29437723898262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17594170-2	7.3874592998136	0	1.33080212323793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103836032-1	3.13021509056936	-4.6520505941158	1.23922810807635	-3.75399053959257	0.000174041434875878	0.00490634667963724	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92694950165582	0
Merged-chr10-42153031-1	2.39690804098329	0	1.35237211098025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119827149-3	7.11326003548735	0	1.29877782271739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78607948-3	10.7986029819245	0	1.29664550127575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164138822-4	8.09407685596808	0	1.30144800116664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122930299-1	1.69979020095349	0	1.51074685520177	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90548724-2	10.3238628937908	-1.56080431042688	0.579027902609254	-2.69555975349975	0.007027047295189	0.0843632982824582	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06534261416025	2.53487809165109
Merged-chr5-135613011-11	67.0973471198706	0.383803162132455	0.211481563146947	1.81483036356116	0.0695499826779007	0.473122336880085	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65106972622978	6.04613627499187
Merged-chr19-34240811-5	18.4936441347695	-0.635267501594654	0.639100056028484	-0.99400320122385	0.320221308953352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22635880645055	1.88086620139027
Merged-chr9-50533488-4	9.02118556245675	0	1.29025417354647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148595547-2	4.3857660132564	1.42587492628109	1.22724345089245	1.16185172978043	0.245295697259954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.733321818366247
Merged-chr9-31198824-4	6.3006515434013	0	1.3052595190716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152784352-3	7.98007723023494	0	1.2934771242283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60076937-3	8.33700850959058	0	1.32278639729541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9066127-4	7.52122108066569	0	1.33551463554589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45277810-4	6.60965928680535	0	1.29344187752899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141761808-7	25.6623995480623	0.509671649016008	0.316054481197565	1.61260693752801	0.106829930303574	0.652604340059583	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85678412624377	5.26973302827369
Merged-chr9-21221039-2	6.69880254903952	0	1.29392427461504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106581671-4	9.08008086772436	0	1.3037492869917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103146596-3	5.17826022244401	0	1.34895204451521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36319054-3	4.46960478831459	0	1.31022648240444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4616251-3	5.73044254085072	0	1.32284018808535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76951607-5	13.1660883690358	-4.74643241192013	0.935300778379837	-5.07476580971319	3.87973535375297e-07	3.82390929753155e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83572005180678	0.469435083901436
Merged-chr19-42019083-6	20.0629140157105	-0.781674670276365	0.438617734769632	-1.78213193018041	0.0747277199267849	0.499836982358006	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32278721532603	3.30237747674388
Merged-chr4-10920544-13	79.3274560382142	-1.13247286602549	0.244788142879741	-4.62633872990265	3.72186420044725e-06	0.000229010299474977	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.73384995062244	5.6206269470816
Merged-chr7-75610024-5	13.8977421568812	-0.537128086482873	0.53767352886216	-0.998985550989573	0.31780169080067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42775749022514	2.99529989251982
Merged-chr2-170218613-6	16.2443107096543	-1.68128303956065	0.557120407444298	-3.01780910750205	0.00254609231641675	0.0390647918545595	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04964517997976	1.67113172082159
Merged-chr9-77655333-4	11.7535653039071	0	1.29455029057808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121796226-1	2.45296060013922	0	1.36324133696054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68929646-2	3.74501118789921	0	1.37680023141048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39542031-4	6.56491899741415	0	1.29771785155871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51648499-2	4.53791688210518	0	1.33536492924083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67363922-4	9.35796029122614	0	1.30999721199865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138532035-2	8.80660007787625	-1.64038453579827	0.632019314076571	-2.59546583350068	0.00944627941534503	0.106152463400711	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02206251523557	2.40173839819892
Merged-chr14-21090567-6	16.2791474045302	-0.658684863757686	0.493749061341279	-1.33404782981937	0.182188181829492	0.952421514386396	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50696571207946	2.46681188023837
Merged-chr12-84031015-5	12.9703473574035	0	1.28229823484732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130802280-6	32.8763904860602	1.71338503707753	0.395696818873493	4.33004501263204	1.49078865667346e-05	0.000696831727889726	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32117355068748	4.3417963607658
Merged-chr12-35074742-3	11.0104622987725	-3.05036543321928	0.815814062140315	-3.73904493043004	0.000184720712993771	0.0051321257275897	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49647788650983	1.04220233489076
Merged-chr9-45245590-2	7.22930470838152	0	1.30915005711488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152790370-4	8.9290588240745	0	1.29397313622506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15577541-4	10.0565415503541	0	1.29294824422416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65675864-4	7.75183729164855	0	1.31592747978546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114916957-9	46.4563996518129	-0.972139166508477	0.238555374734969	-4.07510904999943	4.59927892994894e-05	0.00170450806905767	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30100576078603	5.31015626731227
Merged-chr7-110715772-4	6.45966373121003	0	1.32495059235294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117031840-1	3.11174128743673	0	1.33712952636264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26534799-4	8.05961453932712	0	1.3013775821913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117772813-1	6.03543542255853	-1.96365207126666	0.732856004557169	-2.67945143255422	0.00737429001380354	0.0874238670613219	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66988839309152	1.73830414206781
Merged-chr6-113750284-4	9.1356913904473	0	1.28992257275293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171284542-6	20.0035210395949	0.33171779788322	0.430931455871009	0.769769283174615	0.441436763642017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88993004737317	4.22101243586272
Merged-chr3-100530427-6	32.2341014100359	-0.546435731687354	0.830485485668094	-0.657971440943086	0.510556482633337	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29477935368245	0.82780788634396
Merged-chr16-33950312-4	10.2117733343727	0	1.28417122779449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-49567810-4	7.53999394161593	0	1.29196219102588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131479094-4	8.68893610598048	0	1.29324780631124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35833234-1	7.00239482136268	-0.525040875500205	0.621057052068102	-0.845398782208227	0.397888224212048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71692680552743	2.66843576271652
Merged-chr12-34702727-5	14.7413356710262	-3.48766312158254	0.760217169478809	-4.58771948543811	4.48114201996105e-06	0.00026596249449262	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72898401618249	0.735627456805112
Merged-chr11-62866865-2	4.88138226446333	0	1.33541262107171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119432779-3	9.83916112329452	-0.779017107340341	0.557079581026294	-1.39839465288815	0.161994587990652	0.875212761210184	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40784769495248	2.98445054292691
Merged-chr19-41771951-5	24.3930555562034	0.67938507120264	0.483774821848805	1.40434152527055	0.160217174453778	0.868842446627102	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87179302992449	3.5733918792218
Merged-chr10-40499440-3	9.157366328219	0	1.29049610785426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48700354-6	24.5485302900735	1.07996308704008	0.605959140552916	1.78223747240557	0.0747105144353062	0.499798656458796	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80144286716627	1.92387223541592
Merged-chr19-45675308-1	2.48400225036877	0	1.35595852238586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21822914-6	32.20085792523	-1.68758087860658	0.531488766661845	-3.17519576040313	0.00149735448071371	0.025943680125778	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8657186010437	1.97815176992225
Merged-chr14-59434010-2	3.24857173477686	0	1.37301201730101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18197356-4	9.85287300162112	1.31373253570216	1.29701590303505	1.01288853330787	0.311113406063296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr11-90558877-1	2.00754001457806	0	1.4006246057847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47562940-1	4.30641640973017	-2.78867941769635	1.11632986136685	-2.49807831377174	0.0124868604814106	0.131141173484132	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49530769348567	1.20275690226768
Merged-chr2-181541966-4	9.29404730142341	0	1.28717680303941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9167984-1	4.43913980366047	-3.91093211747366	1.02730670276281	-3.80697615128541	0.00014067630519466	0.00414830046897576	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39221082411505	0.581381506691384
Merged-chr3-121544844-2	3.75463044143027	0	1.34117581584931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89575140-4	7.98694262687103	0	1.29768030181796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12469007-2	7.56812910201454	1.11707912716613	0.629299741907622	1.77511454840245	0.0758789752761423	0.505383024856994	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98925093309942	2.83031286297958
Merged-chr5-117420012-2	3.49703048447342	0	1.34000316981153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56737259-2	8.60662277407908	0	1.31796714196347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118102232-2	3.67360915788777	0	1.35534219207517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4410091-4	10.2614218816048	-0.667394671220194	0.532000863097787	-1.25449922643738	0.209660606731504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57554429935168	3.07215202916989
Merged-chr12-29713283-11	51.7724635013827	-0.559566773683159	0.28869834395566	-1.9382403307762	0.0525939084029151	0.384472708188488	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49203601059838	4.82894644001377
Merged-chr17-71834812-4	10.609812084624	0.055628481932866	0.418665372339451	0.132870988641885	0.894295411141017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14080658769621	4.37510667699186
Merged-chr15-59520710-6	13.1554943900004	-1.59387417696116	0.516270926294529	-3.08728246310711	0.00201995556199848	0.032664196029288	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16521587349998	2.31205403547308
Merged-chr9-45251641-6	14.6739098458484	0	1.28288605790954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3102496-7	19.3725211790751	-1.237381190894	0.462899365322378	-2.673110579947	0.0075151473358845	0.0885954930201531	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11975368815347	2.9250773909296
Merged-chr6-148539024-4	10.1660779916323	0	1.30715319632797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54630398-5	10.5268625227214	0	1.30842964962575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103725956-3	5.03551653885883	0	1.30739210432056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90258287-4	22.0459536275146	0	1.29266339246367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97007096-6	15.1266699273	-2.30629184619523	0.699955846397143	-3.29491046909076	0.000984530418526038	0.018805941166034	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52118191724952	0.898163539755574
Merged-chr17-6142180-5	20.3659509013556	-1.67770192208606	0.39810411564084	-4.21422903248668	2.50632852770785e-05	0.00105188531773666	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56062532944699	3.59126196927996
Merged-chr14-21273701-6	14.5418872620041	-0.960001462293794	0.549623899829121	-1.74665159683242	0.0806977912674803	0.528384555928333	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55213500701631	2.69386385409585
Merged-chr18-75839572-10	33.856961825495	0.861445352904169	0.357195867165379	2.41168902580087	0.0158788184593132	0.156432575160905	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36443573009358	4.79169354708277
Merged-chr4-129746288-8	20.8766043992653	0.172841065280182	0.341162991637415	0.506623137669855	0.612419270530221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2741830212271	4.53654423159641
Merged-chrX-163164824-2	4.15451122968953	0	1.34385221173118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65342742-1	6.1623311021758	1.4708478742452	0.657276238750595	2.23779255589874	0.0252345860904403	0.224198404169397	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78846067021775	3.3632336662134
Merged-chr10-49050534-3	14.5436345269038	-2.21700790007615	0.585900207882084	-3.78393431210786	0.000154368581573007	0.00446739120082804	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49384145104703	3.21725004313604
Merged-chr13-89892333-3	7.84208415533353	2.48442131875496	1.20928157002059	2.05446058250326	0.0399311346939321	0.316015493243271	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr8-106556363-3	5.02498296246621	0	1.31852520041082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81126858-6	14.9034847843045	-1.40058757165181	0.54362995614144	-2.57636201947527	0.00998460469494646	0.110794210300687	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72971009659111	2.42139546294927
Merged-chr4-95212769-4	11.8957470459025	0	1.31247829479982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49982680-7	22.6457668995071	-0.277821947567516	0.33619496475995	-0.826371530477522	0.408593368046557	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7318682627198	4.50744778991371
Merged-chr16-77300736-4	7.73386050443913	0	1.30871082232735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48242625-3	9.61002427821955	0	1.3054936142372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145229306-3	9.50074777245132	0	1.31969663945507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75596266-3	6.11428544585348	0	1.30748721061443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32249175-8	33.3108762209949	1.56520194860316	0.325261430612499	4.81213510515443	1.49326346819849e-06	0.000111646218069678	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05008701498536	5.76872143091044
Merged-chr12-82276015-4	6.37391626298238	0	1.30033678549492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64886301-4	8.15503258786304	0	1.36061204221366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109336996-2	2.81326182761319	0	1.37033679421588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77460020-4	12.8188113784628	0	1.28195153771937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14115178-4	8.39577629082047	3.45336635167008	1.12050752245896	3.08196623623879	0.00205638160844845	0.0330781137517824	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.961728545204858
Merged-chr12-34696990-8	20.8519945011646	1.04517081461449	0.44834313974707	2.33118502761995	0.01974360529038	0.185475220141629	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15733550932691	4.65140873098453
Merged-chr9-65075343-3	10.61404230627	0	1.29086129724237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10693217-3	12.1713389956449	0	1.32145259428344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31133863-2	5.5229846408723	0	1.31571127556717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83768819-8	23.9984438971385	0.817670991500629	0.391824659426048	2.08682881954997	0.0369036110201244	0.297863558018904	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.096454240812	4.71636445334896
Merged-chr10-98725317-4	7.75231601172673	0	1.29497877302835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169326127-2	4.25809343987676	0	1.32352834770547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150568757-2	5.77793260200468	1.96617490295412	0.955412419192256	2.05793316421028	0.0395965496523007	0.31416660194017	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.40684701627341
Merged-chr19-21599176-1	4.11692899010081	0	1.31167761133336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58475654-3	7.19153594786947	0	1.33132073954743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73512617-2	5.15615671102414	0	1.31431840158243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118110215-2	5.62873291418792	0	1.33057886215126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14055604-6	47.3361750958292	0.329849437707673	0.404135747442146	0.816184759193795	0.414394472311519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24141931574641	3.48606565810868
Merged-chr11-8660025-5	24.6999859588277	0.60401510736068	0.47455505240004	1.27280302739567	0.203087946647388	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57844686867284	4.77898501977443
Merged-chr3-107110496-6	21.8850361806565	-0.876925020203151	0.454845579986298	-1.92796205742962	0.0538598457892409	0.391173950220663	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33639955486246	3.53560137226583
Merged-chr15-101240874-8	27.8231865856332	1.51889034069031	0.289377561622313	5.24881864431741	1.53077679789795e-07	1.77284207632751e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82503941549909	5.3221603903448
Merged-chr2-160048285-4	8.92356329066785	0	1.28850578804888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69486056-10	48.8576884694809	0.790481221478919	0.374625202414646	2.11005884383611	0.0348532876857978	0.286120971999515	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36791301310361	3.84188830179291
Merged-chr19-24166655-5	24.3980110199186	-1.8799772529818	0.644762438661192	-2.91576732801845	0.00354814995162346	0.0501855858741963	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2768328435588	1.41695929335733
Merged-chr17-6986296-3	5.8078225414082	0	1.37560056615018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80655364-4	6.71595358977459	0	1.2901553118615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71208863-4	5.91068145990609	0	1.30377719937268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127768210-7	47.4319725698637	-0.496894121913562	0.335495244465329	-1.48107649843279	0.138586189663831	0.784277574242027	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.65881977562806	6.05675080003129
Merged-chr18-67252437-4	15.535399963021	-2.88627336646186	0.52869309435202	-5.4592605753615	4.78121612346253e-08	6.64751805965494e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48586107985563	1.7084981770064
Merged-chr12-85704749-4	5.29565124911515	0	1.34492772260119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25472624-3	10.0918573170632	0	1.30524712483211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77396236-1	1.92892071234282	0	1.42720549152913	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56168110-3	6.61884058583234	0	1.33466426426483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127398553-3	12.2814941501701	0.629842850766362	0.74845312798106	0.841526111949525	0.400053262996625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03252115801386	1.578845274708
Merged-chr15-80219712-1	8.0309637224725	0.0125092870461917	0.668980886793028	0.0186990200963123	0.985081209968901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27309647570397	2.81541700028525
Merged-chr11-68441153-4	7.62845890634554	0	1.29927219033502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62583385-3	5.81738807021735	0	1.30480635959623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70572628-1	4.39750669583188	0.414578578670832	0.913350359400717	0.453909690190359	0.649893828742098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14691243030355	2.52285590321757
Merged-chr19-7922561-1	2.02544962196031	0	1.4420046045589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17011349-2	2.26687219661419	0	1.5723456794626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111544916-3	9.83844692708248	0	1.30022236945268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51710752-1	1.87206455869897	0	1.46656228343258	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104814917-3	10.8629190249604	1.08941525476713	0.640177160346152	1.70174027167427	0.0888040675283374	0.566698300459642	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70521001973616	2.33380954640862
Merged-chr8-13600292-4	8.96548755700559	0	1.29564887588463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84238152-1	2.2469183956119	0	1.39202035070767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-135562741-2	4.54729595006969	0	1.34084228488174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100254836-1	1.41860862373967	0	1.59668474270277	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5414233-1	1.80601474936621	0	1.67420040954399	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75010525-1	3.43976117682435	0	1.32880316105476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129531852-2	2.83997611600593	0	1.40819961288807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69280537-1	1.56591675844522	0	1.43113104377897	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135660301-1	3.2368058529426	0	1.32622256308723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78810156-1	1.85307219089574	0	1.41992690349073	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68209856-2	4.17562613488605	0	1.36130685306072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-62834134-2	2.60162352390972	0	1.3795497817496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149461348-1	1.75767584367804	0	1.52967048323938	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74106086-2	4.39091736332691	-3.75545295282499	1.14566630195563	-3.27796405149954	0.00104558710520351	0.0197045080188018	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23041283104218	0
Merged-chr4-138159556-1	3.02153320849529	5.41904126747856	1.37320169518679	3.94628209859691	7.93740904300118e-05	0.00264092633057004	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.96104799503838
Merged-chr19-46523523-9	26.1261456038878	1.45173990487836	0.420765549999325	3.45023470880801	0.000560099363382917	0.0120118979322678	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80558995265257	4.41653192279356
Merged-chr2-148586863-4	8.77115236963981	0	1.29840634087196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126211094-4	5.99851391005429	0	1.30439173235464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84860110-4	12.3465346339281	0	1.30718564476147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-38757270-2	7.47001322664103	-2.16927897867758	0.752642366466858	-2.88221747183973	0.00394887087900339	0.054563408352265	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43081114684837	1.87368577136467
Merged-chr13-52985567-4	7.09403162579538	0	1.30760878506353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27671813-3	7.91556162899894	0	1.29162215113414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101230455-4	8.70196075570386	0	1.31413915085476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11668534-2	5.10521827629681	0	1.30645579939813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4551628-4	8.05076802232683	0	1.3067721228359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54302982-2	7.76568237569461	0	1.29770808071001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122559469-5	14.0107285323819	-1.875407150656	0.536944179491978	-3.49274137291216	0.000478089301341221	0.0106335001652292	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.623304703274	2.25495835162666
Merged-chr13-109736903-3	12.6648744714362	-0.403993413475988	0.584584374343064	-0.691078022620742	0.489516510673262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4170959245852	3.73804981657653
Merged-chr3-95651989-3	6.5244668919337	0	1.29259373252255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119444673-2	7.0835099423834	-1.86221930190599	0.637213756606648	-2.92244051952497	0.00347299949029385	0.0494114140415288	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07161768010083	2.39994563057247
Merged-chr4-120862670-2	7.1865377320815	-2.33343338253199	1.14759348399362	-2.03332749364492	0.0420194472683313	0.32727089406393	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13719410764129	0
Merged-chr18-21669968-2	3.33998401406971	0	1.37053073011193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24517823-4	10.0884588222004	0	1.31102507423441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165669116-3	7.29678714736588	0	1.2979248391524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191119039-7	22.7405958347951	1.24611003920092	0.355678562227163	3.50347243701761	0.000459234179275276	0.0103372775332147	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38440143335428	5.5676379090999
Merged-chr4-95905344-6	16.764853592032	-3.34211017048746	0.831919676491396	-4.01734718498634	5.88569784977571e-05	0.00207895573887267	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99800859628721	0.683637474991079
Merged-chr15-53206170-3	6.51139100368903	0	1.33421981373614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140572564-7	27.9425549768669	0.810820979366993	0.295270652537669	2.74602630636837	0.00603219265467683	0.0751390890607152	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42606737318965	5.0995071113498
Merged-chr1-84002824-3	6.47168148991983	0	1.30651133412927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114927358-4	13.928615864108	0	1.31068718250408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32588419-4	24.128875023307	4.30787418735389	0.97296113241087	4.42759124064858	9.52912677806289e-06	0.000487238120844521	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.6960750002622
Merged-chr2-30773139-4	9.09587202318931	0	1.30822500281449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64792769-4	7.27406427420033	0	1.30488547943851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83572589-1	4.33264961859832	-0.484763981133267	0.890218373466189	-0.544545019044901	0.586066477696744	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07096379268636	1.72583980988184
Merged-chr2-157156309-4	7.71883758405458	0	1.28646995011105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131470847-4	7.34431985133974	0	1.33697597472888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3022190-4	10.9586185744893	0	1.31607901131774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69575513-2	4.528441629186	0	1.318675488872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60840317-2	5.83586541074094	0	1.34206464616995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117191711-3	5.22479631241034	0	1.319229132552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138012334-5	23.6504360764055	-0.917417713575662	0.3235457889449	-2.83551121641054	0.00457524084648105	0.0607423178289619	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87549881523802	4.99446081227039
Merged-chr7-16005151-3	5.47962648265086	0	1.33561807059168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28226184-4	7.18886624543549	0	1.29511655631837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108480229-5	23.9292328377595	0.873880829517852	0.38259138051486	2.28411008199363	0.022365062210702	0.204572698099178	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11561943976951	4.96469994935853
Merged-chr1-75251731-3	8.4543713590068	0	1.30246911331219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80064428-3	12.3969394299411	0.893039640023783	0.533812578940356	1.67294603996877	0.094337919159814	0.593492410264485	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04198641586595	2.56550782086741
Merged-chr10-8505823-5	18.3901118334502	-0.554852896881776	0.700718636738727	-0.791834079744422	0.42845742810045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02709795711175	1.87697405107109
Merged-chr13-102906577-4	7.77107010386371	0	1.30551453586988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120618282-3	6.9666879837531	0	1.28970270224066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155853089-3	9.66152622792893	-3.12005018557095	0.853164566734827	-3.65703207472832	0.000255152463181516	0.00658498928082912	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72909565368348	0.73596151290311
Merged-chr4-116827984-2	6.32735206124235	1.54902517197344	0.757394983954514	2.04520125534192	0.0408350207888277	0.320982390801455	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22652144760864	2.72908043220718
Merged-chr5-65260262-3	4.83628912094347	0	1.33497681581082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7397049-3	6.95157550958976	0	1.29103857970522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24559395-3	7.09765947758968	0	1.32992127022708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153510561-4	10.6984605242739	0	1.31528121007934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180293243-4	9.35348461286447	0	1.29016398514086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138041786-6	22.4785257761505	-0.311224108956475	0.400309181494046	-0.77745933229639	0.43688781890256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06260336930408	3.26186822795373
Merged-chr16-36753298-1	3.78240425989637	0	1.34423958254443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107142969-4	10.0979973536117	0	1.31797678319264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116093887-3	10.0184140037111	0	1.30665675048491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3751656-2	4.36484158453121	-0.839105403916463	0.968752375018414	-0.866171196638887	0.386396286296855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2084552042275	2.27416815045033
Merged-chr7-7132970-1	2.83633928346218	0	1.38953886523056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105207126-6	16.566400059807	-1.89481391699923	0.563376501898224	-3.3633172676086	0.000770118014666538	0.0154748252725706	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04447630922771	1.92738623187092
Merged-chr2-156324346-9	43.361828286421	-0.762377482341308	0.296315462605101	-2.57285757428504	0.0100862705210924	0.111711429401916	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51968908177516	4.64000107427507
Merged-chr7-45660962-4	8.80225765628792	-2.69290316352299	1.07709690171323	-2.50014939160967	0.012414094467384	0.1305878005579	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58645997983322	0
Merged-chr17-35301954-5	13.8088160717034	0	1.31623695716549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101959591-8	29.4061547198362	0.0485900346239263	0.411206454908869	0.118164571698406	0.905937260932625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75759825359079	3.65666815351481
Merged-chr6-40576008-4	6.68023042332196	0	1.30548067986891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101597434-4	8.23097011167283	0	1.29792841562848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22917377-5	32.5512795831468	0.287220315743856	0.407646342916598	0.704582098514298	0.481070342141412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30991666742185	3.57872402988787
Merged-chr10-17527563-1	3.44486543236925	0	1.36702437840121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132815224-3	5.60607316655491	0	1.3197956731627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75076560-4	9.36470588670606	0	1.28796504940654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54116505-4	18.6749394691245	-1.12655604642269	0.452125842630496	-2.49168691590005	0.0127138051396708	0.132906144721953	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20192010200826	2.64974215847459
Merged-chr1-60940803-4	7.4868922436576	-0.409748146173693	1.27955141256226	-0.320227965950337	0.748795524749745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr10-117897970-4	8.01191520137536	0	1.31794904722216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40031540-8	30.1466747639909	0.552710634686669	0.35642833216347	1.55069220039774	0.120975464556461	0.714374002069988	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74586073549409	5.25134239542169
Merged-chr11-61861185-2	3.77853541457222	0	1.34860036925978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12318944-1	2.94120217406276	0	1.36149556288972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11202488-1	1.86321002175031	0	1.52450768089439	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-35909161-1	2.94657170949431	0	1.36578944062543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67683799-3	7.58182742651968	0	1.30314921434528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157463323-4	15.9314514343099	-1.31846346792727	0.613493734013681	-2.14910665721301	0.0316259461662157	0.266558632552242	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57677891119058	1.69164407730823
Merged-chr12-102295421-2	9.58935123175634	-1.10614399133922	0.587385355563924	-1.88316576309135	0.0596779072481756	0.422092491291188	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25031453032587	2.035269112763
Merged-chr17-34335349-7	31.0266257513866	-0.00921354143492985	0.284478424991642	-0.0323874875052494	0.974163040778895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37711557875801	5.29006918240675
Merged-chr7-132793706-3	6.22747503597305	0	1.31023389138443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34096231-4	11.1524658810769	1.40091238622024	0.544658961425263	2.57209095128874	0.0101086331680149	0.111855267594699	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13941556372388	3.78621889066128
Merged-chr11-32571253-4	7.77320941335661	0	1.30560558125682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88309935-2	5.0864902066296	2.04928758105256	1.12518707819633	1.82128609611973	0.0685633788478148	0.468200143033968	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	1.20539659680455
Merged-chr6-129418110-4	7.24830545616802	0	1.31679415981723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75182572-2	5.00798010694295	0	1.3256164012382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102815441-12	57.4364429772002	0.22548506323811	0.237196101601593	0.95062718870838	0.341793661617243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10952642819541	5.19163660434314
Merged-chr10-17767083-5	20.3682146366061	-1.00216187759271	0.368739031958251	-2.71780796372588	0.00657159672077958	0.0803419194230238	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50490602755928	4.54819032077403
Merged-chr8-80031434-4	7.49988799503154	0	1.31350834084116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45444854-8	30.3377521946094	-0.501849337527235	0.30096397782973	-1.66747310141932	0.0954203686938531	0.598458528905704	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06429953241479	4.52742329326268
Merged-chr17-10394842-6	17.1312248691293	0	1.28264281998626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116142777-6	16.2418060428535	-2.55338006224621	0.542618650641345	-4.70566217955881	2.53043246608976e-06	0.000168384562045928	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83549879451542	1.07779785271609
Merged-chr16-12469777-3	6.50048544280899	0	1.29192298672699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7816629-3	7.18523468555078	-1.0495360637306	0.768478882374195	-1.36573182139773	0.172023152619058	0.914499262206718	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6648334405155	1.46928333126936
Merged-chr9-124275196-3	7.47590827135415	0	1.32007879738836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40575249-7	44.9943319169885	-1.11925874075433	0.328245340077529	-3.4098237022648	0.000650048851144878	0.0135108435836238	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25901499361325	4.024705678334
Merged-chr10-43702595-4	10.4508988848192	0	1.28655485009929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70601444-3	12.059613694878	2.88650098048568	0.645209667161342	4.47374106030541	7.68628146162351e-06	0.00041034946763991	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18825721336784	3.83073178516983
Merged-chr16-45561948-5	31.3717602401523	-0.140345115959745	0.438092173879111	-0.320355222776639	0.748699065311315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33453224041703	3.30016801153219
Merged-chr9-59725732-4	6.96872857459622	0	1.3117432826555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76016855-4	5.59708948818942	0	1.29986202359822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64774502-3	7.1418539110147	0	1.30417126691842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34701722-4	6.54287951425425	0	1.32527957834289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61160710-3	7.1371038397624	1.36315286614338	1.17124250411343	1.16385194471338	0.244484017053135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.851599296279844
Merged-chr2-11740688-3	4.15937919041391	0	1.32860820226771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45018175-4	11.4331019163031	0	1.30257837374907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-136277787-4	7.66650570399931	0	1.30254159013383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124574108-8	14.1946455521246	0	1.28292782941241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20938529-4	8.59057177106695	0	1.29260817394678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173534774-4	6.33701596198938	0	1.29088694760491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89844772-3	6.06584025031927	0	1.30298189187209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92725597-1	2.92150236827828	0	1.3886284653739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135994943-1	2.73281601888509	-1.2400867582865	1.12723139343651	-1.10011730112124	0.271281016580785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00506279837304	0.843323834477631
Merged-chr15-29824371-1	2.17946873395115	0	1.44771637507251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10225068-1	1.63071459976434	0	1.76063367446943	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24703850-1	2.60252026735107	-3.22596877773629	1.32583841503559	-2.43315380000487	0.0149679415165292	0.149350298723335	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93191766387282	0
Merged-chr3-148233125-1	1.93831630470681	0	1.37380427512781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8880260-1	5.51341284647142	1.06126383583516	0.82514020850431	1.28616182425391	0.198386591229483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11903312351746	3.71013794855404
Merged-chr2-128058755-2	3.905482660312	0	1.32401805927076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79625877-3	9.69880222512018	0	1.29329440445731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172335375-1	4.69637392734215	0.427735559468997	0.727576001374327	0.587891242510806	0.556605294993666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12560514971369	2.37705875126183
Merged-chr6-56608419-1	2.60536159870287	0	1.38454212737716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43337510-3	11.7345995262447	0	1.30255051454442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116927033-2	3.10034728275793	-4.37453158448286	1.19743402895496	-3.65325477538055	0.000258937076959587	0.00665375628431034	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87305286825965	0
Merged-chr9-50476825-2	2.63709019701109	0	1.96330135763559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103707510-2	2.4620210903967	0	1.55793328519284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32013107-1	3.02570780094065	0	1.36965055251955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118673882-4	26.8841058435338	0.618510931784922	0.317019986028296	1.9510155795973	0.0510551925086744	0.376509717827766	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09725634679715	5.75145022329104
Merged-chr1-6204919-1	2.63251209100784	0	1.38549570700645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77820303-2	6.10570412902589	-3.26142676529018	0.886021155356943	-3.68098069168143	0.000232338600718171	0.00612440427693813	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85940575575796	0.916190436775555
Merged-chr7-64142158-3	8.11204106363686	0	1.29463306649005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-16433353-1	1.95685228992678	0	1.44847514004326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37724407-1	1.94911155931163	0	1.38804194475139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48695589-4	7.18018634401825	0	1.29593150698489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45049878-4	11.9627864226068	0	1.30066211221471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104968182-3	6.49606247459969	0	1.29435157668285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73263242-4	11.2142159495795	0	1.32385815823969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48243967-4	8.35522924142875	-1.27073203179264	0.687314295686963	-1.84883690004229	0.0644813673429048	0.446829207888596	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11964363720675	2.17623743947486
Merged-chr13-48227891-4	9.6292653347322	0	1.30013247053308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154096260-4	6.32100315806634	0	1.29702494156579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35026139-8	31.5031581885741	-0.445405511261291	0.331107263037891	-1.34520006349217	0.178560635733579	0.938865730821248	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62108180093887	4.12153159578638
Merged-chrX-85292969-5	23.735231719906	-1.70549335378851	0.331277935495652	-5.14822501304467	2.62962933194281e-07	2.75819836797969e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61200634303652	3.91197050322261
Merged-chr5-42977290-4	9.00401332549627	0	1.29100749159791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37050627-3	7.95116972680993	0	1.29919018509595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79663570-3	5.32393495684716	0	1.30583252724713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128707955-11	69.0205332897119	-0.401793507159936	0.253239484992899	-1.58661476969597	0.112599920245829	0.677965022425501	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55079155508067	6.14298757216929
Merged-chr7-73531746-4	8.57882277916732	0	1.29703781520642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64929243-3	12.1865549424623	1.09899076953683	0.398440828438064	2.75822830166529	0.00581155939853841	0.0729610298668378	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40925617560466	5.4523871649248
Merged-chr3-101293940-2	4.63509824050287	0	1.32311665012103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33184069-2	5.65536027907828	0	1.34027020360224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5801459-2	5.38866045575386	0	1.41267601736029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83727694-3	5.04380679727432	0	1.30955469457889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58616237-3	5.09667604999471	0	1.33252200657153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119893103-3	12.7087355938895	-0.298963132475199	0.555793009724742	-0.537903728985835	0.59064351387963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3809946294529	3.07651089655187
Merged-chr8-26690119-8	31.4288081514882	-0.413759029854994	0.347839566835017	-1.1895111117455	0.234238601071862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44658662961931	3.18121583174456
Merged-chr11-115173647-3	5.51623644528462	0	1.35927614653829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77869363-1	6.49991278118068	-0.406232683532587	0.899221278455074	-0.451760532435936	0.651441505125413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60083225254647	1.23021119707292
Merged-chr4-114983409-4	8.21813592032072	0	1.29977923302648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134098573-2	7.61925803567081	0	1.32587985608603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156921728-7	22.3193573282461	-0.314879761850354	0.360666638066627	-0.873049316505359	0.382636197749208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23471898714052	3.24984413917143
Merged-chr17-85189785-3	5.62569797184225	0	1.30104601792344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54693936-3	5.65522640931123	0	1.32151468196477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108398305-3	6.62128040233123	0	1.31179799627354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39778282-4	6.17507159209428	0	1.29549926965931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45926786-4	16.8460285643513	0	1.27747750550153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3309412-2	3.33510825101851	0	1.39219293478827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78699182-4	11.7522465411156	-2.19753433568767	0.564422904188528	-3.89341807247719	9.88415934732261e-05	0.00313691246580934	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51101721363489	2.19764823445446
Merged-chr10-9908143-4	7.96856568535495	0	1.31095005487741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42018105-7	26.6085213695598	-0.583578391268459	0.343084027858153	-1.70097802253195	0.0889471141610777	0.567334126107348	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61621109312555	3.34032013840784
Merged-chr12-111889413-3	5.30998927786981	0	1.31837732137319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117912899-4	6.31579487496158	0	1.29157713748402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75195850-4	12.5054684380412	0	1.31172183007633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15743533-1	3.21613244969238	0.551781067272778	0.997172403073304	0.553345705890153	0.580026709360932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974242091818952	1.8405601103675
Merged-chr18-39141211-6	17.3905725038196	0.178866481049185	0.452172798694861	0.395571077175497	0.692421477367909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27887971432161	4.04860803325332
Merged-chr10-117277926-4	9.72838682440121	0	1.30224758647354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84606262-3	10.549862664423	0	1.29606272747569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39933601-4	13.4119814080817	0	1.29201407548217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184260934-3	5.76897081144811	0	1.3144321372318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36214680-2	3.69541654627552	0	1.34999692873858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70476331-6	11.9164377748698	0	1.29457336573169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6299251-2	9.3932948539222	0	1.30946822259382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118804446-2	7.31818650063933	0	1.29801192688409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69041087-3	15.4143127291432	0	1.31512484946542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118520134-8	26.8329071920168	0.201711142941377	0.325454932566388	0.619782104240287	0.535401252205794	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41160206634273	4.79358944625909
Merged-chr3-95972385-2	7.87656326653053	2.01872837485362	0.645848683094094	3.1256986778736	0.00177383203593881	0.0295469865461273	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30486885723606	3.10828732516377
Merged-chr10-81620452-4	8.55525473674673	0	1.36448994642944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157635870-3	6.12641841816014	0	1.32078191425183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55587892-3	7.36250667887642	0	1.29805559461841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148700417-3	7.43414751145539	0	1.31175695279633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81222017-3	6.55524187143247	0	1.30919348072735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54811452-4	8.06992506665787	0	1.31088236521683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121845908-4	7.2462493264944	0	1.29752861761699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9881090-7	32.1432526086336	-1.78490014016632	0.376103770286849	-4.74576508181507	2.07719680590281e-06	0.00014496320930435	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20885604817408	3.41011570775395
Merged-chr6-136658247-23	107.81691567756	-0.377408963559278	0.191412572461381	-1.9717041503918	0.0486433895821093	0.363690038401889	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.12181549967357	6.70406274535213
Merged-chr8-46817405-3	6.47824633718986	0	1.30506354851433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94601534-4	6.92993205074501	0	1.29067618520292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104994760-4	8.11599653087087	0	1.3105455733433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94704112-4	17.6455081490314	0	1.28564863823853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90718139-2	7.45476230720261	0	1.33109628868425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158046500-2	6.2659687127845	0	1.30813319461428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40356150-2	5.84349621177217	0	1.30054283984411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111562591-4	16.722498156136	-0.403366578078039	0.513417369711715	-0.785650431547594	0.432072310387749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83961346777249	2.5841267066007
Merged-chr8-125127853-2	4.79050815698348	-2.10832779034524	0.9538435208332	-2.210349752655	0.0270808981809959	0.236739581610082	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44558214284687	1.41959898789419
Merged-chr14-15065372-3	8.4976868631807	0	1.31800943224345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18941645-2	3.37318570517043	1.41936703419849	1.33091114473133	1.06646265591608	0.286214551308225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.61242769162773
Merged-chr8-70744487-4	13.1374820650062	0.274764950844192	0.668668856983579	0.410913336212007	0.681136083118549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88510276956393	1.78481374055866
Merged-chr3-51184861-12	72.2629704522678	1.1802588677838	0.233083151166751	5.06368161694977	4.11236233036894e-07	4.00486481133068e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10551826069951	6.31982444512914
Merged-chrX-74014807-2	4.7896037950411	0	1.34026625452932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12084158-4	6.47201800356856	0	1.30662638403948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137175765-7	24.7313635267665	1.13640025674794	0.344362723668656	3.30000949185597	0.000966815584527142	0.018568003416269	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43215255529513	5.54909970887964
Merged-chr19-12558365-4	7.73680882382323	0	1.31427918612694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73289869-4	9.29197426069776	0	1.28964373096266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62005752-4	9.84975169796203	0	1.29710183410489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96636647-4	8.01445423257619	0	1.29964467725165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86796015-4	7.78381175513969	0	1.29854269103626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83418274-4	8.41219767053828	0	1.28597424331162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147527955-4	8.73767413649775	1.60055551820622	0.907500264732877	1.76369702622329	0.0777830020716527	0.514831607257356	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	1.37490486545505
Merged-chr11-26135427-4	11.0671573579476	0	1.3125388382052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31542118-2	3.8095329094933	0	1.32389753467596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108151548-3	7.42263679472145	0	1.29427401142911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45734971-3	6.19859439072184	0	1.32614097470025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50593152-4	6.43109670799175	0	1.30362003985214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32988927-4	7.23218637012532	0	1.30285951831473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5605044-4	7.65789117437138	0	1.28784071160346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103965712-4	6.97678064709954	0	1.29827302932443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142570886-1	3.03393531779531	0	1.36672293790578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35919228-3	6.75592699820723	0	1.32915597905153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37535257-5	15.3413437125243	-0.914028130811971	0.392889345177704	-2.32642636414219	0.019995816523272	0.187305995775477	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39092109216262	3.31651953856474
Merged-chr6-50188198-7	21.5826370433279	-0.250116188132177	0.361948625476288	-0.691026766030811	0.489548720646589	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37616889875302	4.22796711677659
Merged-chr9-48282710-4	30.9946843300516	0.726046180489376	0.52034616640494	1.39531378794546	0.162921236041766	0.878613908035299	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53759983687032	2.63557780014842
Merged-chr7-107661368-4	6.9027315534371	0	1.29692150785429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22142742-3	11.1963363163441	0	1.34694111140363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104234016-4	8.50240296869219	0	1.30512655557191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146331149-8	24.0788331345641	-2.20790404018001	0.499643326001843	-4.41896033686212	9.91768448736753e-06	0.000503168486421987	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92317513024029	1.70656116796365
Merged-chr3-27198782-2	4.48944171777678	0	1.32523149067445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75054318-4	5.80096742058832	0	1.2993312291511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137810320-6	13.6434709216332	-1.73151366801828	0.995550414353458	-1.7392526215187	0.0819903371009604	0.534437961915148	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04998903427117	0.61242769162773
Merged-chr8-69094322-8	31.1933673429796	-0.146367683382851	0.353841290592763	-0.413653486108566	0.679127896353876	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20186317254474	5.00148569996273
Merged-chr1-43467138-3	5.48534965724691	0	1.31689506459864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79177316-7	19.7295349222567	-0.363031700154761	0.442181448552828	-0.821001652925268	0.411645326701413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91500991950558	3.63068143299972
Merged-chr5-125484205-3	8.98855873434265	0	1.28867474083868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5771106-8	44.499453704245	1.46548241976942	0.291831402795388	5.02167486340365	5.12228400705909e-07	4.72815865568059e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08916370340893	5.40680354827285
Merged-chr16-76539849-4	14.7551064320788	0	1.31136290329126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36409624-6	95.0974585912806	0.0350845787826526	0.375047151840415	0.0935471143041271	0.925468921962248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67435358317123	3.74704201735367
Merged-chr1-82832048-3	16.0700125558992	0	1.3138495219596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67704884-3	4.33057148630934	0	1.31726885189217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102990469-4	9.43626278555832	0	1.29019494243092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66129093-6	35.5173938531974	-1.03627207859706	0.318709933243765	-3.25145836544877	0.00114814590275798	0.0211521686387434	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45035915640965	4.44130811324915
Merged-chr4-139232674-8	24.3109412111766	-1.54115618014621	0.399753270621612	-3.85526847034854	0.00011560269425237	0.00355156260395646	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87111276145234	2.85900179690775
Merged-chr10-122008923-4	8.09201006878154	0	1.31384903798238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95390737-4	5.94681021734353	0	1.30712817003835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80033477-7	23.6191448484009	0	1.28883951652616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85077216-7	22.4752954630296	0.419000679181225	0.295953844412836	1.41576359655848	0.15684473124776	0.855556954684866	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64205958205444	5.15761470746181
Merged-chr5-123891156-6	17.0855084887144	-0.176115692815959	0.402734406183742	-0.437299843549024	0.661893908799106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79896374388019	3.62916575791747
Merged-chr4-137871093-8	36.436717633401	-0.638943012229027	0.325131466646033	-1.96518355734739	0.0493929963397262	0.367361112999744	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87991851618634	5.21496733410397
Merged-chr11-88107528-8	32.4231267720855	0.676500210610251	0.376424764847177	1.7971724333411	0.0723082494200009	0.487521137701133	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88849841584658	4.42672101491978
Merged-chr14-19733500-4	8.004162518315	0	1.30226052130518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30987893-4	14.1778748430796	0	1.30585096676963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106421971-8	28.1176229612815	0.369046565736605	0.30094617737328	1.22628760051953	0.220090465789895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12138582713013	5.400237576204
Merged-chr1-38011857-4	9.13887940791612	0	1.309168700761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67646864-4	7.37190357227307	0	1.29779754625237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66225900-4	10.9396980927572	-2.12549889209241	0.984794167432406	-2.15831791290366	0.0309031229580927	0.262463669459257	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01722318936832	0.688405034366054
Merged-chr1-72229224-3	7.78287447515569	0	1.30966935689757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181922247-4	7.5555651046356	0	1.30898281137963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129585794-8	22.9590771800111	-0.210065334426876	0.376278938611875	-0.558270242819928	0.576659861537531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41519693631311	4.09753102930749
Merged-chr2-52954658-2	2.74483429649727	0	1.48034236434376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111192109-1	3.34880491427503	0.189730294272605	0.927808207059197	0.204493011410169	0.837968252699494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27383381756437	1.41959898789419
Merged-chr10-94116460-4	7.0238647375071	2.865960148132	1.14086287080433	2.51209871183857	0.0120015512978902	0.1273345301367	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15637648126681
Merged-chr19-56770804-2	5.22046147186834	0	1.32079844816735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105162865-3	11.054994315079	1.29148155909707	1.0670166994172	1.2103667728935	0.226138185907778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.82780788634396
Merged-chr5-21411060-2	3.66553608523464	0	1.37718017422498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74779546-2	2.73674187809333	0	1.35011707378787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107229179-1	2.23278820177057	0	1.37279668892345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52457415-3	4.5955017341459	0	1.34611739834458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-91740939-1	3.96801930318413	0.426807658517358	1.05833694495373	0.403281450725523	0.686741185981856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29361125028158	3.0237869060369
Merged-chr3-30823685-1	2.96406958234008	0	1.42313002691791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-16168949-1	2.49296834010694	0	1.48368108224848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67697934-2	2.85887172321623	0	1.403463401514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181278046-4	9.4027533621569	0	1.30208473197952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164522488-1	3.47714517559773	-1.213060291815	1.1306239026833	-1.07291229995762	0.283310466823603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58499231233938	0.926147595614233
Merged-chr6-72050994-3	5.52567720988958	0	1.34696165568654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48931943-1	2.3255415490764	0	1.43582842539448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52717635-1	1.52928987459401	0	1.52923847651472	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53563241-1	4.29618292916785	0	1.38758001762788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88235241-1	2.81499475416284	0	1.35580977265634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92822267-1	3.33403082175368	0	1.37961595102558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11439675-2	4.08891454716156	0	1.37738651025649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27744689-1	2.43894850805046	0	1.34288092144508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51778464-1	3.34949431062004	0	1.32844667753043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148945851-3	7.75463520624004	0	1.29800377933803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69082509-1	1.61171604853405	0	1.52724933545868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3129541-1	2.68341738630221	0	1.42751878869577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123516530-1	3.49830605679246	1.23368877755594	1.13460697520589	1.08732698151452	0.2768923283982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05257464479105	1.73249259224818
Merged-chr17-43131056-1	2.19330308714273	0	1.44365449966764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64343952-3	10.2180916655265	1.21080897928515	0.827805898803688	1.4626725673675	0.143556996034193	0.803088388224499	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59692474785778	3.18993426541433
Merged-chr17-3205040-3	6.88872498975697	0	1.30784601499189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59862345-9	26.1743970203673	-0.647687761244345	0.441482770806684	-1.46707369816693	0.14235600817711	0.798694574597873	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69945617750752	2.80505986605703
Merged-chr14-122557494-4	7.07551482484087	0	1.31310706491374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43040740-4	12.9062936421842	2.33278286237744	0.74539680786536	3.12958525950491	0.001750532642562	0.0292708050309253	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.967213572601712	2.80618576806959
Merged-chr2-93470362-3	7.07229230284193	0	1.31166199969643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128453677-4	7.04876898312659	0	1.29366092214942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44419102-3	7.71017137429123	0	1.30795869202918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93355339-4	6.86634548326153	0	1.29516037408846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94509893-4	8.23700513367766	1.30895917648296	1.29621184233388	1.00983429847866	0.312574684648309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr10-17416298-4	9.3232080749528	0	1.30367146369653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90710239-5	11.4482525436948	-1.70873225115279	0.572906480125154	-2.98256750522268	0.00285841604585739	0.0428310146600772	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87612503110038	2.29802325937094
Merged-chr11-63806714-6	26.0128267710907	-0.660952560169002	0.495729801338834	-1.33329196345256	0.182436009980472	0.953564510333059	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32354390009881	3.58820913554114
Merged-chr2-166041877-5	13.9380515964077	0.187481308235505	0.5428919612757	0.345338154934101	0.729840165491533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64875764146265	2.45391569783273
Merged-chr10-121571734-8	33.5932364420425	1.19959275748417	0.331409782521831	3.6196661074878	0.000294983402160663	0.00737695575874117	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37014022672974	5.14179502940711
Merged-chrX-41805755-2	4.66376172080645	0	1.30293433481543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88538607-1	4.75450222025078	-2.11809859935365	1.16375846394805	-1.82005000605367	0.068751389989047	0.469057040115292	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06530600001239	0
Merged-chr7-19503690-3	5.70681298364199	0	1.34421430224252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4940046-4	8.99981045970544	0.116087427406106	1.29879268653854	0.0893810294816906	0.928779099402496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr14-62845234-4	6.92696959480323	0	1.31972222265618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112137618-5	11.9652612378111	0	1.28557226662568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131981797-4	8.88556447180503	0	1.28904284655677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35219982-7	41.0407072465702	-1.05475340571862	0.446104352167537	-2.36436475141696	0.0180610206446105	0.173128721031323	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23540554331878	3.05454104792675
Merged-chr5-38505593-6	25.7726790025938	-1.37456409794113	0.551799249383515	-2.49105829606841	0.0127363220517524	0.133077662423059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72796373185096	1.94701576741112
Merged-chr2-92004961-5	16.5920766010911	-1.79152022340972	0.526856093080284	-3.40039765495646	0.000672879197452055	0.013867845979921	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52590738707262	2.3640534479995
Merged-chr4-139171890-3	36.943977851389	-2.42498689068474	0.357256053623798	-6.78781189594153	1.1384694885615e-11	5.59356595485263e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.35210723763589	4.91305165092507
Merged-chr11-46120298-4	14.466813110008	0	1.29334176908206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84147550-2	5.02229198043676	0	1.35205267142029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32564409-3	14.935299968465	-2.62511859348221	0.544355781870534	-4.82243172739286	1.41818577802912e-06	0.000107136147804729	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50161131141657	2.91665652935043
Merged-chr3-131300086-3	6.03916570723935	0	1.30571630735044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79349323-3	7.03243234272675	0	1.34243604434172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112238040-1	3.48023984866809	0	1.35377606445231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63540456-5	22.3020594322724	1.89642683226728	0.405220387292031	4.67998869686824	2.86890733173628e-06	0.000185983748511546	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48929683357882	5.48202112649282
Merged-chr9-69667450-3	7.51373361818283	0	1.31490525792449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135722354-3	6.6995250573744	0	1.29564145034548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62073849-3	15.7261615413935	0	1.31018797541842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142700922-3	8.38572155037618	0	1.31865428651591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167685341-3	5.61882589229351	0	1.30596763717293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25474976-4	7.65459845871564	0	1.29584638194392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37426185-2	5.38135966583477	0	1.3433334060202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97506478-2	9.38426755728976	0.741327444876497	0.569833483350015	1.30095451835908	0.193274023177645	0.993757455173969	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69225442114771	3.22612724859575
Merged-chr7-80176336-2	4.40780699482256	-0.583175311264767	0.946414739290626	-0.61619424027766	0.537766329382443	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92961049911315	1.11548603074465
Merged-chr13-118767705-2	7.18158030966467	-0.199511558351303	0.653137315914136	-0.305466482300227	0.760010894047813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15690319310148	2.73381153525686
Merged-chr1-54795459-3	6.18438726333807	0	1.3174232228661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35380835-3	9.1577041207037	-0.590590685002655	0.457588752394507	-1.29065822075426	0.196822217910605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24327372685022	3.51413226608606
Merged-chr4-66891762-4	18.5312264208382	-6.94417003635605	1.01111557549454	-6.86783015181983	6.51857645866831e-12	3.46311298591983e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76966610874458	0
Merged-chr6-83632931-2	10.3577817921311	0	1.33031095084372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77663953-4	12.3111448207808	-0.564589412144398	1.18816990438226	-0.475175654645059	0.63466177806642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	0.306240821987646
Merged-chr8-90961789-7	16.2294596696169	0.593096557256422	0.446295019430756	1.32893384741983	0.183869795748126	0.959293866104357	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68458970000664	4.511047628941
Merged-chr16-23557900-2	3.90245912631631	0	1.35126181696086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48579440-6	34.648989495726	-0.145103791640991	0.374333339591819	-0.387632562462152	0.698287968108384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99523672105062	3.72382744200009
Merged-chr9-22165019-4	7.90688737934914	0	1.29459995364757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28003970-5	16.8422384714487	0.689562060219281	0.403037066599745	1.71091474547695	0.0870968521504441	0.558476194742707	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02487582300312	4.34894356724357
Merged-chr11-106461355-4	7.7641585017388	0	1.30126021944994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106957647-6	33.7968492919691	-1.1083961556831	0.456076253008669	-2.4302869276161	0.0150868739232008	0.150284582833152	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96905690243331	2.36575169722698
Merged-chr8-18935156-3	6.9262219967737	0	1.33259332909756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55836886-2	4.68226849044636	0	1.3113052159845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106669940-5	19.567058900382	-0.87919757359972	0.615916747531962	-1.42746170991899	0.153446854405258	0.843254406523085	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62454030026979	1.77743761853437
Merged-chr15-78862587-6	24.5509388862122	-0.867770322352505	0.491038010443715	-1.76721619079624	0.0771920291936698	0.511788792582137	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54494382457648	2.44857983344985
Merged-chr10-88333704-4	8.6536790371673	0	1.30345742852267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-66929862-4	7.88861371236622	0	1.31781448782651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73567568-2	4.08768712394895	0	1.36925919278202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193165087-2	3.12278692386403	-1.92183530970504	1.25578982377795	-1.53037974453666	0.125922759745012	0.734232948897789	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36700944053185	0.420961122473315
Merged-chr11-53532071-2	5.46432416625117	0	1.29178077667144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47287690-4	9.4938851484408	0	1.34762568108236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110929813-2	2.10789456130508	0	1.43523464891952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71950810-3	10.9908569768831	0	1.29990821591031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-16954963-2	3.43236914216389	0	1.364345399082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124737653-2	5.0543380810023	0	1.34569370181782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22889622-2	3.25142545675042	0	1.33955099604247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135712013-2	4.15414775025379	0	1.35750560107182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59847802-2	3.0868744590432	0	1.39232918808341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101060987-12	44.9344083385645	-0.404209334548656	0.266409091636482	-1.51725052649556	0.129203443918667	0.746949171295715	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.09667578337488	5.71244269851567
Merged-chr1-62229316-3	9.67273341920228	0	1.29851876764685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148045036-3	6.7806633218571	0	1.30975860991321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128337374-4	7.3416187656383	0	1.29224891265523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60953958-3	6.44325619901971	0	1.30546645238938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64001632-4	7.15797785680554	0	1.29849960962781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155212181-2	5.83311068133477	0	1.33873271569568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144048071-4	10.2036006862928	0	1.32320414805962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32693938-4	9.76834965762882	0	1.29549770490568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86220304-2	9.97800773786128	0	1.32866965726311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90870591-5	16.6708097327358	0.660344617771231	0.42859076659905	1.54073458700754	0.123381395372778	0.723467756598685	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21352044778893	3.83205911720047
Merged-chr11-31821484-3	10.8755285953929	-2.38094307828613	0.734762887781576	-3.24042370386283	0.00119352207281824	0.0217641848307069	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0536160623537	1.31495854024319
Merged-chr18-46370788-3	11.1923817244468	0	1.3467017472713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125394358-6	32.4439299728616	1.37177546878506	0.593713824797818	2.31049945527578	0.0208605186607019	0.193601967391312	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20244859869596	2.7990276774604
Merged-chr15-103358074-3	4.77795249811281	0	1.34783639488864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118126114-3	4.87105574721016	0	1.32673429051005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124645431-6	20.1080364128601	1.26910957731047	0.606850069858842	2.09130663461186	0.0365005854655244	0.295449926648106	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44871070116967	2.36575169722698
Merged-chr13-112667319-7	29.8817106264331	0.352357191306111	0.34174674841271	1.03104767768145	0.302518462184612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41497949533337	4.78180685029471
Merged-chr17-87083896-4	7.39673738034492	0	1.29469966992083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58588890-4	7.65276937782838	0	1.31081046336127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32924828-4	10.2612559704778	0	1.30291019014748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59871184-7	35.3725499754345	2.04334964686806	0.376560982202306	5.42634458545755	5.75198633670855e-08	7.78197306746495e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43343310479607	4.85731132856544
Merged-chr11-99186248-4	7.30236589772016	0	1.3462862246419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43537153-2	3.82886172297337	0	1.36700755733416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95870237-2	8.40600008973499	0.391338840011722	1.01681795770585	0.384866176925772	0.700336566188553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22145229803727	1.40343015234056
Merged-chr14-66812431-4	8.86067308480778	0	1.30049689964915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94184534-2	6.01687713790073	0	1.30432271664168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117285240-4	4.75012046133068	0	1.32270242417975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63826129-3	13.7966590563922	-0.668644010620644	0.603776344668807	-1.10743658065541	0.268105217543714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36759168249315	3.72248125232878
Merged-chr7-19843791-3	5.22109048267045	0	1.31916988453564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74638121-3	8.67853386347541	2.71064151980735	1.00866168544827	2.68736441456354	0.00720183338725273	0.0857371114088936	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.76171389311731
Merged-chr17-26540059-8	23.2233983810254	-0.353984715527279	0.310174420200968	-1.14124406293055	0.253768372617897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17174374901937	4.93072416071829
Merged-chr14-33057753-4	7.46837836263597	0	1.3018358227123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44679747-4	10.5389766007152	0	1.31756731987753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97356990-8	33.9536070980808	-0.192647432813329	0.300942177310328	-0.640147667352967	0.522076601754199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45235289640944	4.28660331444821
Merged-chr18-36522263-8	24.5451946801671	0.46528779115474	0.298998963831058	1.55615185147477	0.119671987582429	0.709176176708209	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36686023735393	4.9579853743264
Merged-chr9-89869746-3	6.92813273562516	-4.39245167849199	1.12178754897947	-3.91558248483677	9.01862036214463e-05	0.00291315257629611	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81240419085383	0
Merged-chr5-67532555-6	14.2398960449603	-1.09166095648512	0.432040581728902	-2.52675559345978	0.0115121586331612	0.123444948809083	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50900578669609	3.33773048058368
Merged-chr11-101708635-4	8.88439713246556	0	1.30212693980024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60381403-4	7.06190647498673	0	1.28692235170701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9120234-2	4.58696572196076	0	1.31687769866199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103920368-4	9.03754087038542	0	1.29430037270313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23728396-5	15.1746152526961	-1.32179161536065	0.455992168694376	-2.89871560545718	0.00374694590941341	0.0523514918530102	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48928392990667	3.05607989528133
Merged-chr10-121334756-4	9.10003812836519	-1.71684141998532	0.69353087919426	-2.47550825996376	0.0133046684116192	0.137292309930251	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05881977604604	1.46928333126936
Merged-chr1-86501767-4	11.6696868886063	0	1.30543122852523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78206252-6	19.2500756335091	0	1.27793981445629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6242290-3	6.19523638012073	0	1.29588198759267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93256922-7	23.3939986673889	-0.130421427531326	0.399852228919957	-0.326174066563561	0.744292661261119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92591527645632	4.54204522740437
Merged-chr4-49620100-2	4.23397048508433	0	1.33654934326665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30265361-7	25.232892904942	1.5421133021874	0.430537376028922	3.58183374556499	0.00034119090605715	0.00825757812859648	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98707309369122	4.51936773762769
Merged-chr17-87313461-12	56.0970239641329	-0.599244341280834	0.268556991473352	-2.23134887679993	0.0256580284319825	0.227065212068842	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.94930602544739	5.24725302157992
Merged-chr1-45826337-4	5.65745818072778	0	1.3358621600004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91056611-4	7.80378653484261	0	1.32823540340163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106794644-4	8.23641164259595	0	1.29967804405084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45117695-4	6.73385025018821	0	1.31039704453822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21441021-7	15.7526577618384	-2.67119989193955	0.643679676712244	-4.14989005957649	3.3263500153859e-05	0.00131735556427519	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30067688048184	1.46928333126936
Merged-chr1-127278238-3	8.87068297099494	0	1.29836037868391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55392587-2	3.55138450717581	0	1.31932509760686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36703984-3	4.34226026584375	0	1.3228828089178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170324394-6	20.9919258168525	0	1.27844799367464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6891277-4	6.78646388820117	0	1.31150306319014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103944837-1	2.96687478370759	0	1.40088103705665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89251613-1	3.43861457322675	0	1.33697794657441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55831253-2	3.56216207679456	0	1.3403806507339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50842675-8	34.3705045684225	-1.01728350862876	0.34912038557105	-2.91384734513514	0.00357004434172136	0.0504079769995946	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39714791294617	4.37947462008674
Merged-chr10-59974839-1	2.63550510067393	0	1.54495983926478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115539094-3	5.97613478588651	0	1.29781717432471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-80706812-2	5.37618468903872	0	1.33198360388201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69660838-2	6.79248983561054	-0.365224377915131	0.792082626707694	-0.461093786936336	0.644731319108383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63992488962298	3.16670355083028
Merged-chr2-3622389-3	5.5385692506483	0	1.32270733733354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34027369-2	2.28638622560741	0	1.54480928762366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174084991-1	4.81961323386709	-0.317754174066128	0.861299976115314	-0.368923932285801	0.712184424313435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76057060368478	1.65199033198162
Merged-chr12-25217425-1	3.34737070482077	2.76380853505542	1.17538651637143	2.35140398206	0.0187027159246509	0.177922212085054	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr5-123914649-1	4.75719565066807	-2.78702855571584	0.952972636263262	-2.92456304584376	0.0034494019838962	0.0492149829780964	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34453478818605	0.986577844696341
Merged-chr9-62360895-4	4.68129278105493	0	1.31262025605717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37803423-2	4.80999497150526	0	1.32193318228343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51376279-3	6.63835781253726	0	1.29949096585271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91002302-1	4.44423194702475	2.60282627529681	0.998776725246734	2.60601414660901	0.00916026782027789	0.103669355902992	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	2.15258675016244
Merged-chr12-108310012-1	1.22338774118698	0	1.64309914826944	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79504476-1	2.7678864717058	0	1.46975988262105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20428441-1	4.84947372167434	-0.711663151862175	0.77801471438094	-0.914716828239475	0.360340307596981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66929784861259	2.53630606335036
Merged-chr2-118562545-10	37.3174856541882	0.74328825321496	0.26250352198458	2.83153630700094	0.00463249739711052	0.0613792853488295	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78816262801988	5.70492382509888
Merged-chr1-165587897-4	7.80239934085086	0	1.32048527283569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165680548-4	16.5680968792422	0	1.30633412890061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13424706-3	7.69778805380187	2.27241908520172	0.96878680025331	2.3456338222275	0.0189947584582067	0.179947763068328	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.76419196995713
Merged-chr8-25007996-6	21.0963175693204	0.416837302178954	0.442351282028052	0.942321903686764	0.346027857248044	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79475136556304	3.80500128385901
Merged-chr11-45884200-4	9.1627279869762	0	1.2844021675607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67633967-4	7.40407204458304	0	1.32508151838547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29070760-8	31.5150630926861	1.20465541216796	0.303314460730914	3.97163857359465	7.13799595992934e-05	0.00243190554743244	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91538384690716	5.11170725307554
Merged-chr3-59248113-7	36.3411679976314	0.66026741738302	0.359330160363389	1.83749512346888	0.0661368357149314	0.455643401858504	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17976989554619	4.87882140042297
Merged-chr3-65586495-10	51.4993881871785	-2.22769855189805	0.307699696429716	-7.23984644036493	4.49193042891481e-13	3.59457998849095e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2718278925422	3.57347540789367
Merged-chr5-136035084-4	15.0995316455479	0	1.28704714728735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83603653-2	4.1682128252114	0	1.34562643924359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192932043-4	9.53820302713313	0	1.28965587044334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40543752-2	5.85959049227893	0	1.31610587833307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25101649-2	11.3528916561138	2.53290285425988	0.582840233441401	4.34579273861082	1.38773558671861e-05	0.000657599489845643	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72583785428778	4.43736044370692
Merged-chr14-122633411-2	5.40447037324117	0	1.33577853331305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129366061-2	4.97484381468187	0	1.30002546522021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59199556-4	7.03488753076255	0	1.30677236364195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86016139-1	3.46595252037159	0	1.44168808453368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155481562-3	6.97810195708843	0	1.30221763455574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83958507-4	9.54061228375404	0	1.287202785734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115675781-4	8.54309550316181	0	1.30387911124619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52453296-4	10.1152303763533	0	1.29420320910541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-9007246-4	13.8727633317127	0	1.28801666386763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27220214-3	5.92664329733364	0	1.30069099081663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40631328-8	28.9704749005208	-0.0436042602931111	0.299190227133581	-0.14574092446423	0.884125913221558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64402694530055	4.6275913059136
Merged-chr1-152813818-2	6.25431021361102	0	1.30844812388902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21842337-2	4.30058437473061	0	1.31850543471373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131975646-8	53.1420263309744	1.05985497122316	0.367019041563446	2.88773837648407	0.00388022465363378	0.0538452240850187	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9461369902919	5.11860226880806
Merged-chr6-65510472-4	7.87152654296534	0	1.29845213438935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120830841-4	11.2637218788913	0	1.28820115911826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120711418-4	9.80545580195216	0	1.30153842885942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65309974-2	5.62600034489408	-3.45580976013286	1.05976141852018	-3.26093184724392	0.00111046727407512	0.0205857005650249	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38857242820794	0.581381506691384
Merged-chr17-87746427-3	4.95586497292407	0	1.34343266622202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148900521-1	3.16112393742568	0	1.36158514494775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17247554-7	29.5209550065406	-0.667419557268908	0.296765125244512	-2.24898244603036	0.0245136129162559	0.219403718617403	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36028482564072	4.66778967098604
Merged-chr18-68499085-3	5.65568222277155	0	1.35134479667168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117072338-4	8.05596684574504	0	1.29532335187226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23630383-3	6.14740565928107	0	1.32651649924015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73488889-4	5.66539811981232	0	1.31062756155529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148678722-4	18.6603535590322	1.20955827893365	0.537383307470518	2.25082964453638	0.0243963291832101	0.218508823302865	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23733000056275	3.31841236551031
Merged-chr11-58092879-11	49.5669438577712	-0.332526643078837	0.221547438198919	-1.50092750239917	0.133374313861566	0.763711699403953	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.38542736928916	6.06146515679184
Merged-chr3-81981687-6	16.1517849814521	-5.01966833718077	0.992030931150981	-5.05999175989081	4.19274596901506e-07	4.05895078653716e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8906696071292	0
Merged-chr13-49100587-4	9.84468574906489	0	1.31477876071599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99487583-5	10.4092498959549	0	1.29025345367311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7398505-4	21.2005081170451	0.243279230020935	0.897430174655207	0.271084299248577	0.786326196993659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.986465049575574	1.11548603074465
Merged-chr9-31262446-4	9.80032842676121	0	1.29643009497035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-4016415-4	8.11370389779938	0	1.31375584525609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58618424-3	5.13494794713178	0	1.31632179618564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13833951-6	31.8812404655167	1.19184043201525	0.34570350405911	3.44757984232483	0.000565633196875554	0.0120948517287402	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12703219328361	5.26027633947269
Merged-chr15-66883829-5	19.8368282419248	-1.75663150024519	0.40031308982693	-4.38814404246597	1.14322053783867e-05	0.000564502129690186	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84535566759415	4.10610461670098
Merged-chr15-90654417-2	3.09081234455744	0	1.33895031506146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76799638-4	7.77130544939761	0	1.29816088055332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53228668-4	7.34590780115478	0	1.29809986374252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68058174-3	8.94753830169403	-5.13593421649913	1.11612180722194	-4.60158934559538	4.1927923282897e-06	0.000252285642250846	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86827114832978	0
Merged-chr6-3386798-8	22.4439501052254	-0.0455073172466864	0.356612499786573	-0.127609989200944	0.898457625529903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19193315904116	4.35404809613912
Merged-chr3-106474386-4	8.47663985042014	0	1.28981488621508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56777209-3	6.5924375404759	0	1.30268224177142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122641579-2	6.28379567032976	0	1.30181309090895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181852606-3	8.99283458601576	0	1.29487970122058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7869288-4	9.97746184514723	0	1.29664516590167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8873827-2	7.30991366143558	0	1.29853545936458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36920660-4	8.10889970621662	0	1.37139953460604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163822507-4	7.79427970256506	0	1.30411468169886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37880237-3	5.60901818843371	0	1.37757761669547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136946443-8	25.6693237299701	-0.0441777339841346	0.327411487680936	-0.134930311385977	0.892666973674552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82820487748656	4.70966243570768
Merged-chr18-70504335-8	29.2198057733644	-0.445491240514083	0.291661502807974	-1.52742558145354	0.126655219301506	0.737253871412451	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32566106924369	4.89236553689763
Merged-chr10-98878470-4	10.8363133871631	0	1.29194856032174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72636266-4	7.42367003847285	0	1.29629556052908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143710528-4	10.4243864322536	0	1.29613253173837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176223443-4	9.22152026757956	0	1.29990739102626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131275382-5	12.578265349849	-2.50772215351717	0.585618812424853	-4.28217485557461	1.85075453536781e-05	0.000826653491921703	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43717549681035	1.74976283603542
Merged-chr2-163743510-4	11.4425889086934	0	1.2996315237221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57231681-4	10.287065881001	0	1.3498260576474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79542792-8	69.0248839283101	-2.8088730091838	0.321040587507262	-8.74927694031915	2.14724112628316e-18	9.35424124253995e-15	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.42480988677759	3.07683016080309
Merged-chr11-118216159-4	14.286707237099	0	1.28563959124443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71353849-4	12.9984068195271	0	1.29802057222169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62549932-4	10.0516303904362	0	1.29181940366874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121305630-3	6.35266971543398	-2.97576321118219	1.1230809048036	-2.64964278036814	0.00805769168935025	0.0935901032940422	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83537416499892	0
Merged-chr2-132463595-3	7.63071495934377	0	1.29327493046261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71250245-1	5.34040988068431	-0.00932316748078976	0.843045884953233	-0.0110589087108906	0.991176447333243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86266766824241	1.5268023559189
Merged-chr15-98699606-3	6.28747620923403	0	1.30851867288956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40955385-3	6.94421746317509	0	1.29781099677276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106557165-3	8.93379244132574	-1.38027609197338	0.555338042758671	-2.48547008434139	0.0129380461011651	0.134548665842627	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86410366596479	2.56744335633305
Merged-chr9-69706083-3	6.73691133979568	0	1.30497890113355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163712900-1	4.05731401140807	0	1.32067050615124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110097321-3	9.63517643569973	0	1.31955389938825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44596159-4	8.71756991526393	0	1.31061218945307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140768570-4	7.73134995797786	0	1.33468326941904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13666084-3	7.37832170284126	0	1.32185293399447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37428788-3	8.47246063218007	0	1.29433793776738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41128483-3	5.57341214211103	2.489160954013	1.21871200304998	2.04245215258696	0.0411067010097894	0.322545447188485	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr3-148982530-4	11.2720335577462	-0.150445504882521	0.645465709760877	-0.233080553478598	0.815698855154071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3307444810318	1.26927213904674
Merged-chr12-76957375-4	9.5375845161761	0	1.29717027662263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13660166-8	42.233065633411	0.144571418845752	0.31254849185687	0.462556763550015	0.643682106043151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1269583597291	4.34139202193762
Merged-chr2-116977989-4	7.57643297985617	0	1.3162693944346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-54578566-1	3.66351435122199	0	1.33997265108964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-14657020-10	51.0996765006853	0.138694883115141	0.245672537820624	0.564551839393657	0.572378630805113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19621981763893	5.27270680832465
Merged-chr15-74924176-4	20.6979730486375	0.0655092340392897	0.49866825147019	0.131368367338713	0.895483910975624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22067922242529	5.2584470009376
Merged-chr14-46981317-8	50.4284062208305	-2.66961425547987	0.274719122597221	-9.71761350371635	2.53656705351489e-22	3.31509021357968e-18	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.71610721754107	4.05084621745947
Merged-chr12-76306360-4	7.47450789951693	0	1.30056385759525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110452702-3	6.19130973630411	0	1.29795126667317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60916353-5	14.5005145968949	-1.55651394668223	0.551541497564087	-2.82211574932558	0.00477079547886601	0.0627900103448093	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53096772245748	2.00098049458557
Merged-chr5-137886152-4	7.03924515202174	0	1.29716272639464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100006929-4	9.96539257148747	0	1.30290628161727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149132520-3	6.29537944791212	0	1.31474144110958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44601170-3	4.41384098551096	0	1.31964561214438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53488864-8	47.9244459036887	0.247724743562648	0.347176241788571	0.713541751262781	0.475510587110881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00240565887139	4.09340650258232
Merged-chr9-123931133-4	8.70973258083434	0	1.29053219190826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128983488-2	4.80835183413414	0	1.3540497493776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3110042-2	6.68804591238283	0	1.37954885396551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38459922-4	5.45757297500523	0	1.32488384544914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74476177-4	12.1351373110821	0	1.32648702899149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111059534-5	20.9722444798531	2.21672769613511	0.545492217910694	4.06372011066532	4.82967349568229e-05	0.00176806635433532	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33070484769634	4.38844057575597
Merged-chr18-64972390-5	19.4495794448932	-4.82021502235043	0.942191739687814	-5.11595975565182	3.12149616135512e-07	3.17156320375402e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99126469032561	0.729295484888209
Merged-chr7-89269911-3	7.50407035482073	0	1.30388331282219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40108145-4	8.51602945904402	0	1.31624527443795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10293115-2	4.44311343935678	0	1.3923146930324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17704457-4	9.27640650689602	0	1.28822442042993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100666472-1	5.87871606541307	0.654079391950652	0.837362269901088	0.781118776736756	0.434732639312304	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79270923257062	2.53247394686427
Merged-chr6-143327034-1	2.73815100288495	0	1.49483922648517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31435739-1	3.96202675861489	0	1.40908781847838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119834175-1	1.14374142104009	0	1.7262678480788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98959510-1	3.52021417453189	0	1.35428930246527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64287726-1	3.42043380360589	0	1.35884492634361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51525738-2	2.9088142974177	0	1.38835791861844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124027542-3	6.65923632419615	0	1.29651893146021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122617212-2	6.04491677266741	0	1.35784660916202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172397568-1	3.83669501841448	-1.90641455367595	0.959144546585737	-1.98761965593425	0.0468537707480019	0.353790906320653	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96739614618768	1.21444166002597
Merged-chr4-48322349-1	2.6195004726318	0	1.38280130007194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76472247-1	2.55592209431424	0	1.38526717568222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62997970-1	2.20240137521725	0	1.34494120163757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5630411-1	2.57374058839968	0	1.36854986408673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97727382-1	2.5565615376904	0	1.42762528587901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24359541-2	4.59770616018587	0	1.38477694852961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24336623-1	5.77210464141194	1.75191707137831	0.754286329287497	2.32261543574995	0.0201998207505924	0.188595154560396	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50727673373327	2.53270363442897
Merged-chr6-15671580-2	3.68758612796823	0	1.36939010317729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129626067-2	4.49643514825588	0	1.42353239311709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79941215-2	4.4661479425704	0	1.31779348435516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139197159-3	10.7580982574522	0	1.29457003569896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79492047-1	3.13343017763733	0	1.37351561417493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93998217-2	2.86060944312941	0	1.41179940605235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16836421-1	5.42962018952343	-3.04445904480496	1.00451735825491	-3.03076798005155	0.00243932615656801	0.0378173682152059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14822097857936	0.469435083901436
Merged-chr5-16832331-1	2.992622328664	0	1.42536554952786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118481510-9	34.214989980187	-1.0880869109703	0.419828019854926	-2.59174437986843	0.00954906939350815	0.107123345680375	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60542244793767	3.49156196783829
Merged-chr10-81299673-4	7.25333778710697	0	1.29525313876617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72462070-3	7.59206341979487	0	1.30003553460902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156437953-7	33.3008536064338	-1.15149590948659	0.295471218902477	-3.89715084184443	9.73310008046195e-05	0.00309498373653463	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.98244704345224	4.87331687108683
Merged-chr13-104610556-7	20.4916677794253	1.57523875680798	0.595509229226966	2.64519621106931	0.00816435601269124	0.0944596331454182	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46554074918779	2.95337926806373
Merged-chr8-14652947-6	25.690102355886	-1.94922505302068	0.471334422278397	-4.13554572059106	3.54112100168136e-05	0.00138644753131139	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04620203169022	3.13024311431347
Merged-chr5-130159905-4	7.26546424707237	0	1.29106639715041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135254947-3	4.73258515700145	0	1.33679208022497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27461252-3	5.72094491674705	0	1.31671037777238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101513580-3	10.1594642024821	-2.91152007015005	0.896725928831333	-3.24683381682128	0.00116696507318597	0.0213963242627415	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1722773972082	1.46402698790757
Merged-chr1-157019969-8	43.4947210110803	-0.795927504931352	0.232151167576409	-3.42848805474728	0.00060695324476623	0.012773580268114	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.3305348690537	5.49948671416846
Merged-chr13-81401956-4	13.5647711722486	0	1.29771321240015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173934669-6	24.5186723494422	-1.0409903359643	0.295574482192549	-3.5219222181912	0.000428429826824897	0.00978545105337284	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8378296422539	4.74917885286258
Merged-chr12-104131374-8	35.822096969194	1.21405153498463	0.338627038719232	3.58521735174032	0.000336797591560719	0.00818155220004712	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33684444941571	5.33182829384105
Merged-chr13-24776374-3	7.4709893230512	0	1.30019823155593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60486189-3	10.0210267463599	0	1.29938368980883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39775422-1	4.92662131195018	-3.64609535756465	1.18187071465776	-3.08502047842048	0.00203538138465785	0.0328323949547894	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27168854644322	0
Merged-chr7-80053431-2	9.69825371050193	-1.23750779242099	0.620601652954418	-1.99404527288921	0.0461471071588176	0.349515699958526	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68736753414729	3.02164517182551
Merged-chr11-4973401-3	9.16665156796911	-2.28764616825973	0.857458083787983	-2.66793935646815	0.00763180319971004	0.0896311667664005	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90625080108427	1.11145969726662
Merged-chr7-126755047-4	7.08069630058199	0	1.30213619428477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44536681-3	3.66162208074254	0	1.3544612069618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40305647-3	13.0375340158039	-0.620719862184178	0.526532219986076	-1.17888296028796	0.238444783751462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93683266212425	3.33607286535922
Merged-chr18-65507019-6	23.6748139468295	1.14623017942477	0.342736121177178	3.34435184563526	0.000824750671620867	0.0163277153790927	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64794817429931	5.816369551862
Merged-chr2-120571325-6	20.360474668881	-0.853821126470222	0.398949397562091	-2.1401739962205	0.0323407078386713	0.271602094130037	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20698172500793	4.23044393868147
Merged-chr4-101657325-7	40.7408555558585	1.40117414453251	0.285686300242396	4.9045899062841	9.36227323671238e-07	7.60929237470407e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28162973391174	6.72338287561628
Merged-chr2-27768049-4	15.4008699132476	0	1.29052062361788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24547440-4	7.00937292249035	0	1.28902945551361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-98929508-2	3.86910129039614	0	1.40284548569414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135661517-1	3.3294430710133	0	1.32861348496569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113705004-2	4.29623339835126	0	1.31449987546955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4654724-4	6.64694226237178	0	1.31834462411582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24301105-8	31.3633197402516	0.372142048253097	0.323150096826965	1.15160741682329	0.249482432246612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.129364796167	5.44895091132787
Merged-chr7-123399071-2	3.56898300986362	0	1.35805780280209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3487560-4	21.6808758727744	0	1.28912331229709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-76269130-5	22.6132819706715	-1.64484336869768	0.328869479432616	-5.00150811055939	5.6883573519008e-07	5.15549791286144e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88368185643422	4.01505074880619
Merged-chr4-141977544-4	6.88803813429128	0	1.30475277659167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119047445-1	3.39386568968767	0	1.38739510956458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6591672-3	5.92989098738529	0	1.31113180316699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80509684-5	17.5338848234595	0	1.27946189750377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-103807028-1	6.46186817508261	1.16006872367333	0.742660135065207	1.5620452329402	0.118277333351389	0.702951398379251	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61549568399925	2.2758534078984
Merged-chr14-27186044-2	5.81025037472915	0	1.30667068907791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37279400-2	6.80766175706933	0	1.37758326914374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82805168-2	5.81714704022467	0	1.31341479137114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41087988-7	45.5094326621565	0.509764460610734	0.377648211735789	1.34983946638512	0.177067482285476	0.933069282615694	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29470957732025	3.73739266797416
Merged-chr12-55465758-4	7.64934056075876	0	1.30140527498854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130496373-5	17.3687517355471	-0.902411757960993	0.416645174595796	-2.16589993832632	0.0303188340329455	0.258644194349459	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45831000597963	4.09168683618623
Merged-chr10-13961672-7	24.9459978013631	0.911525463254618	0.329439660500682	2.76689655965915	0.00565927086868211	0.0714886360303308	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65294445787828	4.63925073514756
Merged-chr15-97939708-3	7.09235188270944	0	1.32890644753933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121290195-4	15.9349752563381	-0.132586741616717	0.370414168522448	-0.357941873945036	0.72038681311892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43179541745317	4.31923031864703
Merged-chr1-64933167-4	10.8492220249695	0	1.30636660099735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136570742-4	7.92184441381132	0	1.31014172911483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85844295-4	6.1722753495528	0	1.29792512617971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75297652-4	6.70713160037203	0	1.30939415110454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3986316-2	4.6591304813232	0	1.41989501853637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68091968-8	26.1916999591666	-0.479750561387964	0.314741878055796	-1.52426669228591	0.127442103975122	0.739988601951157	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.242612031434	4.67617390589508
Merged-chr17-46388398-4	10.4743041118705	0	1.2953863365788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44759276-9	51.1257761743756	-0.640308886974784	0.249645302037072	-2.56487457104119	0.0103213108310325	0.11365126615479	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26119986586352	5.63500116629857
Merged-chr10-49049405-6	25.9946192727974	-0.343584832447714	0.532873209127124	-0.644777831879603	0.519071169709741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52626888112754	2.18069501644732
Merged-chr10-68193028-4	9.14476971994225	0	1.30821707907176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132384483-2	4.31953440159317	0	1.351513862715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129051408-2	5.33027717802833	0	1.32801695154838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52783196-3	7.74830901990723	0	1.34640931014099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118477834-4	11.861071691357	0	1.33430001622534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14668659-4	8.26402661675654	0	1.30525556801201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-21993396-2	3.14832911477635	0	1.41501073028811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76225909-3	10.1079391511392	0	1.29136070567603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80639965-7	41.6487903479079	0.403940099572709	0.326099128861576	1.23870339973884	0.215455359205088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88484149166859	4.25875491385395
Merged-chr8-126747634-4	13.1618235100745	0	1.29469394314798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55469382-4	16.1170187931977	-0.19293669911591	0.360258394730291	-0.535550876643286	0.592268986699082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55827905733424	4.43820708839273
Merged-chr17-51209748-3	7.50636528636882	0	1.30002796502231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32730823-2	4.85358712405267	-0.661621956514731	0.927448503785207	-0.713378644544085	0.475611484154045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26307616428242	1.72583980988184
Merged-chr8-35781082-2	7.81176409468248	-2.65572039724056	0.640126003819252	-4.14874631150032	3.34301025383653e-05	0.00132235077510413	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99762007445005	1.92073949962037
Merged-chr10-119066170-2	4.43099737445859	0	1.34168722693073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32953524-4	8.31523793303807	0	1.29833769778922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126820768-1	3.18552967894447	0	1.36124381335064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33068244-1	2.69423333312288	0	1.34129570668242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34392399-8	27.0054827291647	0.079333727165441	0.26485447113302	0.299537050766255	0.764530306526408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2562610451399	5.30567515368146
Merged-chr7-35683981-5	12.3725061870537	0.510879869558499	0.565488329539093	0.903431322755851	0.366297022215521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47604748965671	3.59092488806883
Merged-chr6-29998944-6	22.1086485414917	-1.16586293524496	0.383817504362378	-3.03754498425434	0.00238513802026215	0.0371531344861741	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92993080807609	3.79550874567568
Merged-chr4-155162944-4	13.7379177653393	0	1.29795575278392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73401319-3	7.01042424033742	0	1.31455963433368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73918864-3	8.14559465576147	0	1.32783449915714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22641927-3	12.8453838411867	0	1.28556881544313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112116238-4	7.38179896969835	0	1.29790876955005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5529524-6	21.857156425908	-1.22555723626279	0.410251691574517	-2.98733012302566	0.00281425649786504	0.0423051311501009	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36436254062633	3.00993615579623
Merged-chr11-78159279-3	7.30940128585804	0	1.31697852218821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110907760-3	6.49715948487771	0	1.32798681413524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-37043366-4	8.0117243745326	0	1.30242524758132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134362404-2	7.69240990078664	0.138491951413747	0.669723171986217	0.206789845725388	0.836173986692738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21322361233255	4.21058250868588
Merged-chr18-38404448-4	8.10115491463722	0	1.28569071385892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58932379-4	7.63465534247538	0	1.31209662340717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73123969-2	3.93335841884381	0	1.34982508126071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28444138-2	5.51973828115404	0	1.31877207031162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-49109297-2	3.33899034520293	0	1.34507799322151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167467429-3	6.19293387397257	0	1.32229831807736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75792908-3	14.3535614991792	0	1.28722111169821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14336036-1	2.73021814112554	0	1.37739207852707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77822049-1	2.33961108424605	0	1.36817060238334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51842997-2	4.5191165542241	0	1.30780318987817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83565469-1	5.24463125211452	2.37275706878878	0.945594204059269	2.50927623985315	0.0120978835309263	0.128190091975339	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33431883998801	3.75359042990469
Merged-chr2-117172593-2	4.59683843425265	2.36117330152497	1.26299926552476	1.8694969711989	0.0615537046317375	0.431935111997136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr10-63164779-1	3.07486030518935	0	1.40940847075601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140568454-2	4.27255392051409	0	1.33732468420164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11261674-3	9.88769556138719	-3.8312241700487	0.963254102594389	-3.97737643652888	6.96798102490818e-05	0.00238767534375275	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05084144513643	0.609949614787909
Merged-chr15-62108295-3	6.40589619159204	0	1.36527643668784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141370107-4	6.22614789732754	0	1.32900708715394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114294365-4	7.70254168617836	0	1.33901532363667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155541231-4	11.0868311886306	0	1.3053485159657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40576199-5	52.2438217458169	-2.08880536288352	0.475791281239524	-4.39017158414883	1.1326125408312e-05	0.000561545516640029	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58406871451863	3.66981350822531
Merged-chr11-63827636-5	13.9572325690726	-0.425571538453864	0.865669898711608	-0.491609491201265	0.622995432517104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44021131351804	0.845523456341755
Merged-chr1-64299087-4	6.45099219202454	0	1.32222745402914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70731267-4	5.70102288441279	0	1.31236613460204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95671301-2	4.60786762457475	0	1.35008320598635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64041441-2	4.43101232499071	0	1.33506761942198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67960111-3	11.4682817393453	-0.216469895470103	0.973008078605707	-0.222474921051322	0.823944194196485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.982617679364345	0.683637474991079
Merged-chr12-17271478-6	17.7783857868912	-0.528701257310729	0.375347505643196	-1.40856472831689	0.15896391461072	0.863837350162686	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81854258373077	3.47690088621949
Merged-chr18-5820481-3	7.69515957021162	-3.3481007567804	1.03447019484555	-3.23653670590314	0.00120989665077278	0.0219914176561765	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1069205339839	0
Merged-chr6-97407565-3	7.196028348505	0	1.3149199305794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20028431-3	4.4497522800221	0	1.32071183554482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135551810-8	27.2179898989428	1.43693430150624	0.306640464303569	4.68605571925987	2.7852046727123e-06	0.000182585961674521	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13789834925836	5.61295577822098
Merged-chr2-91476822-4	9.94428371410176	0	1.31581211414465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51107010-4	7.67694453757979	0	1.29659893865244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32737252-4	6.97927894440894	0	1.29978139180334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104092960-7	18.9875100586921	0.545028485875367	0.447372536910883	1.2182877599926	0.223114639756458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96882854174983	4.29103066414375
Merged-chr3-37654183-4	10.7906710419635	0	1.29159134378038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37963086-8	27.9868326329183	-0.360334593051885	0.328878201338881	-1.09564754241827	0.273233047520264	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55120606335493	4.39935457395866
Merged-chr6-51858052-3	6.28379172217408	0	1.30432071763932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76778449-2	4.80473519535859	0	1.3009319066901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89571534-2	5.23157363382992	0	1.30653813468978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60305447-6	17.7297096637896	0.17045384432632	0.33131681911299	0.514473864570666	0.606920728404723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83186937642262	4.93801798785211
Merged-chr3-103212432-6	21.4073537563312	-1.15426340643787	0.455744060561201	-2.5327009309052	0.01131874779372	0.121870966111126	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27731863367376	3.15282907313963
Merged-chr13-52591965-1	6.68080868817244	-1.21993684966551	0.759345936717389	-1.60656268859386	0.108150332869313	0.658025293452341	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52291536374477	2.19968205137681
Merged-chr3-83863001-8	93.6038302350295	-0.333121885807157	0.334608925991714	-0.995555886083582	0.319465977733314	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74865498403518	4.37699142442326
Merged-chr11-70466389-4	9.65019715783541	0	1.29447617608812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128717595-3	5.42062469405839	-2.12330849834904	1.14600769752353	-1.85278729186324	0.063912852418336	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56807771414467	0.563523181795778
Merged-chr5-149247748-3	9.66668463038179	0	1.31897830373671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142222686-2	5.75993987321326	3.14829878573137	1.1811378090636	2.66547964308019	0.00768785860170736	0.0901436942736711	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.47158896970822
Merged-chr10-122807276-4	7.26161558695403	0	1.29465270641364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31194070-4	6.73305877744135	0	1.29802806581306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78808086-3	5.50041935647049	0	1.30661711380838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13439072-4	14.1536953429027	0	1.30491345155618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77733945-2	5.3745714292008	0	1.30540056804067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47715251-6	17.5911642735199	-1.24471540477875	0.488355605493023	-2.54878901926832	0.0108097674548552	0.117748802151186	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35919979632006	3.22173656189578
Merged-chr12-34297298-6	21.4747716238746	-0.384911555759208	0.552415165195806	-0.696779487621007	0.485940805006609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06006463184473	2.36818926292598
Merged-chr12-99381096-4	13.0489034538654	0	1.32733869677537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146207772-1	1.18063671214792	0	1.53907081668589	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107322922-4	6.51935464863997	0	1.31912969917416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36816821-1	1.5284295440386	0	1.45928172772077	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109059624-1	7.04418465590757	2.86508143854553	0.859193429082342	3.33461749306623	0.000854168067961525	0.0168071263381553	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17874192672722	2.2899778460724
Merged-chr6-97924347-3	11.309673061788	-1.70527219654035	1.19836622457509	-1.42299754580033	0.1547368666972	0.848345942712916	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24796263415261	0.733321818366247
Merged-chr4-108623882-1	4.21041785025511	0.438093491931844	0.940004958677287	0.466054447785361	0.641176527903342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09019803309947	2.17930017423938
Merged-chr13-9061564-3	5.28350179910319	0	1.37873241104747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62723910-2	3.26285170245741	0	1.42858017304104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88596241-4	8.81128662105109	0	1.29001154206164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18939035-2	5.78879611467439	0	1.30615106837122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16538072-2	4.59289096268726	0	1.32863173367005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58740776-1	1.23272678827801	0	1.75599923343439	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30869447-1	3.419268377944	0	1.32478486914227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143090516-1	6.41358303957749	3.10550609940324	0.828400943434968	3.74879594719707	0.00017768557762279	0.00498756089146858	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24145067700844	4.45921210932902
Merged-chr18-18115560-1	1.22031044545757	0	1.77948130888133	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69095933-3	10.2836293546821	0	1.29966611036825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148818420-1	3.47134347750594	-0.371471683210766	0.973468602107523	-0.381595957390453	0.70276108326451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10778793724077	2.13691092425662
Merged-chr15-77343615-1	3.90911909236208	0	1.34050659926349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44494686-1	2.32953487269033	0	1.41968684579011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-146947200-1	3.1961942688895	0	1.34426962344614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101646271-2	4.05907916699219	0	1.34427893499715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35039122-2	8.67184445842359	-1.63863352310249	0.691518445976832	-2.36961650500556	0.0178065440319832	0.171165993867898	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62635468635422	1.88639437725876
Merged-chr6-116693769-4	8.12868769456806	0	1.28551212510334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19963875-3	9.37325426393647	0	1.30313079153391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98677018-3	6.00035771112766	0	1.31591233125517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81404906-3	7.13292126474211	0	1.30658096124736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119418264-5	19.4769523285651	-0.191814355455009	0.460535494563084	-0.416502870505096	0.677042067329097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44767878693939	2.72400794361709
Merged-chr1-72237472-3	5.88445242344584	0	1.31505962991817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117404701-4	9.47784430822008	0	1.29305963647005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119926620-4	8.88762664932922	0	1.31092663435683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36685547-4	9.24952193231327	1.26858758789967	0.753051547022702	1.6845959521831	0.092066552857525	0.582286194640711	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.964915449582866	2.26360001117397
Merged-chr14-8102762-3	9.75816680064229	0	1.3046859653399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61931358-4	5.89868904623011	0	1.31801950585935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82818281-4	9.0754958660344	3.92199148046253	1.10315349120777	3.5552545604226	0.00037761330756805	0.00885697027865822	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.54028618764495
Merged-chr14-49019941-4	9.09185337666624	0	1.29032073890384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29810534-4	6.53914379403993	0	1.30069160785949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38422014-2	4.79735107220897	0	1.29819451732405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70932143-2	6.23189436459653	-1.41554948489788	0.78400916823862	-1.80552669821209	0.0709923015522675	0.480731910594246	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24269644287275	0.887107926668329
Merged-chr13-112673348-2	4.64317032577986	0	1.35390029047864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193145329-3	5.95446669885569	0	1.30800251572695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124696015-3	6.3781653884017	0	1.29705853247966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65863483-6	15.1644952579871	-1.69128191924885	0.508863807833029	-3.32364356280532	0.000888496775828803	0.017343069732447	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21926295421146	2.58382759840956
Merged-chr13-23879836-4	8.07716608421103	0	1.29800962236689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52578124-4	7.29650446445742	0	1.30026164013115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64621446-4	7.51996032336669	0	1.29142245645125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135295712-5	25.7345411619175	-1.41265274328585	0.283402418127167	-4.98461781879352	6.20844058190272e-07	5.52647949165879e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81548253248752	4.36571104183501
Merged-chr17-46524258-3	7.53893903099515	0	1.3086987985416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77421321-3	6.66163310283185	0	1.297715263833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57743883-3	6.98645720428315	0	1.31516872808577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127219836-4	10.7853735730344	-3.64148729753063	1.00015815597123	-3.64091146564161	0.000271674553618991	0.00688628602823373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84691022578853	0.563523181795778
Merged-chr12-81910664-3	6.08911885431397	0	1.31151856323964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46251770-4	8.30547728254089	0	1.29441581564859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102757323-4	12.6898810713306	0	1.29454075295808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130804042-4	12.2245811344865	0	1.30807398617885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167570085-4	9.63035164064397	0	1.32324913698948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16986848-3	9.31637705788337	0	1.29634114593431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117415744-3	7.83276122516426	0	1.33711805557673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96837541-5	20.5070565420362	-0.974433331516012	0.413518736996259	-2.3564429960155	0.0184508992720489	0.176013498369534	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5065933068952	3.44906518061842
Merged-chr4-70515685-4	7.23950892559022	0	1.30610866949566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157297387-1	3.70911411351498	0	1.35849283609405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149782583-3	12.3970916082914	0	1.29556632394634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16049642-5	22.6260539767987	0	1.28001593279051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128344705-3	4.47052219120461	0	1.34171783934671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77253032-1	3.00084547964004	0	1.3359582010851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34765916-3	5.96312522834021	0	1.34670516135985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67380894-3	8.57825516915421	0	1.30715779148859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37305531-4	10.1842368215243	0	1.29243920461668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58264795-3	8.12668414709417	0	1.28651753549047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-71126819-2	3.84625168386404	0	1.33543859338492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71011170-8	30.6717740293908	-2.39548952923098	0.3878074893019	-6.17700687922027	6.53282278265704e-10	1.78616668433267e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95409759791219	3.39790278147358
Merged-chr15-97925010-3	6.01216904085289	0	1.31803717179051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10990111-4	7.48879370265041	0	1.2944232580965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14851465-4	8.45028042625327	0	1.30580381632716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-105716867-4	9.06408101850523	-1.18215477495529	0.763426352842738	-1.54848567979525	0.12150540686872	0.716304303717975	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74082250432897	1.92713101668536
Merged-chr7-88327677-7	20.4949155030783	0.0460754290362033	0.410968638978753	0.112114221539385	0.910732841361869	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3999583488034	4.59994362807678
Merged-chr2-71103480-1	3.76853338381439	0	1.3891293745727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99963094-8	23.6100340405405	0.86399805583443	0.346048131563199	2.4967568873483	0.0125334851023777	0.131526114902838	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66021717373393	4.39625931237697
Merged-chr12-80324826-4	11.772690406792	0	1.30595068455247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152115583-4	11.4358917963493	0	1.30552950013168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77191903-9	36.3815867934814	1.07408654075254	0.345586227563865	3.10801315296642	0.00188349685351935	0.0310257084421667	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26116185243815	5.31540314844811
Merged-chr3-27268955-3	6.92065460117204	0	1.29784039565076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121158591-3	7.53028459191032	0	1.31098993868878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34199625-6	39.3601101543965	-0.332649338256157	0.316866367712909	-1.0498095479718	0.293805684546918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45567286507516	4.19947025867557
Merged-chr11-114747967-4	8.51085285642674	0	1.31360286691322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30775226-4	8.14556233864163	0	1.2949769680368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47979141-4	8.70424616357462	0	1.28607132530822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108904069-4	8.76113143707917	0	1.30720814552803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80885497-4	9.15834969251737	0	1.29851843030599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-42965514-2	2.68416055749937	0	1.38589375839496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130891964-2	2.42345241544465	0	1.45292137279447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3948390-3	5.39266723506962	0	1.3124820364714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166826989-4	9.17480810743519	0	1.28638893468045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119039964-4	10.4996155509673	0	1.28654802021783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13276594-2	4.07004083330176	0	1.34892584258947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52414139-2	2.78094312060458	0	1.40859909491899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8246423-2	8.91528358876992	0	1.38223996123909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22744883-3	5.843869738287	0	1.30914994889502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25727048-2	2.4465386409985	0	1.59653291260944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143021541-4	12.1995299754219	0.730582963408678	0.915425600780862	0.798080109170518	0.424824003469218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23543629839426	1.37490486545505
Merged-chr5-117164734-5	19.056371759342	-1.37701640199653	0.324828164362434	-4.23921492367915	2.24302835175102e-05	0.000963028453833919	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74159924426034	4.45137319945404
Merged-chr8-104121482-2	4.2194364715258	0	1.3886723697863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84708787-2	4.77293213688433	-1.5286487161171	1.2347940608697	-1.23797867560233	0.21572396785233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.531725110705892	0
Merged-chr1-170936539-3	4.16434980839561	0	1.40957931590726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100734779-3	6.87207904194515	0	1.34105731644024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67378026-3	5.25024558627283	0	1.30619132208693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35749975-7	28.7637025392352	-1.32753531176128	0.408030075899024	-3.25352318413362	0.00113983423795167	0.0210227513726193	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12099674078863	3.5409318396774
Merged-chr11-8589763-8	60.6584246101418	0.741829717091345	0.328560295428538	2.25781911999982	0.0239569386840171	0.215661952782172	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05549159177163	4.77047480257198
Merged-chr7-4087738-4	6.56906112094643	0	1.29860746115948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8245886-4	9.21874748545644	0	1.32523128242454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49720014-4	6.77481269354438	0	1.31879173771133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51639068-3	9.77544112348467	0	1.30613514179573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67109016-6	16.5065335403998	-0.536205118827601	0.472228548740113	-1.1354779804359	0.256175102800558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45037647659424	3.81767434410619
Merged-chr1-171712764-3	7.21008406476415	-3.21989958126167	0.951330577001594	-3.38462744612935	0.000712749221455688	0.014527545422721	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63453422908804	0.581381506691384
Merged-chr6-30354927-3	7.00039761724205	0	1.30894840428013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145277141-5	21.1145382252344	1.29281355806376	0.358391157406827	3.60726968661291	0.000309435994460802	0.00765634399622702	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79361682729746	4.96521620116692
Merged-chr1-156593537-6	14.9485164693873	-4.29277704447442	1.03083464445327	-4.16437017088342	3.12213222447512e-05	0.00125088198859933	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23306718434369	0
Merged-chr12-118930735-4	7.0586474382301	0	1.2946759923713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109799515-4	9.01961409072636	0	1.29013927691442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46179222-4	13.4757855108502	0.442263100093271	0.395210255612096	1.11905775169802	0.263115502053984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56045079308738	5.11779389860696
Merged-chr7-115131429-6	21.3331556510644	0.381491280749616	0.382558447746399	0.99721044717985	0.318662371015007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56975225911841	3.97365286732077
Merged-chr1-172321594-6	19.7872448993338	-0.854987778653024	0.347331197885994	-2.46159223201614	0.0138321827960414	0.141194424548104	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28959451930947	4.33442412063071
Merged-chr3-15276021-9	47.580558912876	-0.674895164297191	0.23531356545827	-2.86806739332194	0.00412987552798437	0.0563287092990329	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83451419681937	5.18897948593893
Merged-chr2-143837381-4	5.91209766240562	0	1.32442510906015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105685947-2	7.70276192332328	3.7185502094736	1.00055420517354	3.71649051120487	0.000202009224100909	0.00551168883427891	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.11197723984608
Merged-chr5-90999817-2	6.04886685992468	0	1.30994162321014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29707971-3	5.29247786885251	1.30636384931584	1.32113713857044	0.988817747360743	0.322752319467345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-150869608-1	2.78535263979951	0	1.39338522993324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116166407-4	9.9060145515173	1.76016422653286	1.10876337190818	1.58750214078918	0.112398962495075	0.677129400129359	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	1.03956264035389
Merged-chr10-111439678-3	4.4535251526342	0	1.33576217590763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73040176-4	10.0115136931599	0	1.29723468217758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60660876-11	45.2447326802919	-0.673907911428996	0.280218903883876	-2.40493379314718	0.0161753959521354	0.15880369950244	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.19563416429966	5.56884370457889
Merged-chr7-84779331-6	16.3195549203159	-1.20819648389966	0.44268762333461	-2.72923032001379	0.00634823487836598	0.0782710432382492	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3531082246466	2.70530474452499
Merged-chr16-91366781-4	5.76121257684859	0	1.32979160537202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16042237-4	9.22212313275488	0	1.30201712279068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88162236-6	15.3499694157663	1.37863626727066	0.362236514216873	3.80590087736232	0.000141288964019583	0.00416260984798181	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57993946036915	4.78885359062842
Merged-chr19-42017034-2	3.81860934591214	1.85512167122984	1.22921749060689	1.50918912674594	0.131250458081957	0.755322979640998	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.581381506691384
Merged-chr5-121871089-5	14.5183527404889	0.70145008500199	0.484986837240423	1.4463280879812	0.148085201202627	0.821527766175977	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68062172288463	3.12137783325817
Merged-chr13-107025822-4	7.14371630475477	0	1.30697270474117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14494368-4	14.818077518424	0	1.29800732793977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124021325-4	6.21201444184911	0	1.31691755892597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102495683-4	6.50693806181564	0	1.30103886434645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101133219-8	36.9657271068759	0.4402366307014	0.254769446792724	1.72798047899193	0.0839917242438322	0.544064553175799	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05850540726333	5.51539593005965
Merged-chr2-83705970-3	6.37652581327651	0	1.30807371963802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-121004837-5	17.7866301053995	1.80514016267675	0.550741060632078	3.27765676415158	0.00104672590107095	0.0197116284528479	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66487282107844	4.52069715892747
Merged-chr8-90909318-8	33.0689145822195	0.713966674600007	0.305879342341984	2.33414479426259	0.0195881414475837	0.184412432075177	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97332002539082	4.6051330771164
Merged-chr8-115571950-4	6.48017322988381	0	1.31797688171169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34120990-4	6.68144837239119	0	1.29640346353065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75315186-4	7.20518587908019	0	1.31042188288156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51557395-3	6.13960929413525	0	1.34141785423764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100323777-2	5.87811870715927	0	1.31635399248019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33102234-1	4.48423040214951	0	1.31893660963097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101759908-2	4.76704924460701	0	1.33300986287669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83562452-3	9.39603232782487	1.59732907335864	0.682251475916332	2.34126144060483	0.0192187037878855	0.181825020663554	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40413870619367	1.92309980705253
Merged-chr4-120819518-2	5.35009382251666	0	1.32424105786349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61706634-2	4.45966296416733	0	1.32339156638791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31948957-3	8.70524596020405	-1.36611524401264	0.656600878182663	-2.08058698884743	0.0374717258465335	0.301242172172465	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79376234648224	1.8405601103675
Merged-chr8-56277352-4	10.5004891912202	0	1.30492158732547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106692375-3	11.0730337153818	1.05835761088154	0.396804131675415	2.66720411002997	0.00764852051527049	0.089757025365933	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25180906889675	5.32060686286852
Merged-chr5-146805234-7	26.9433229731118	0.480871568709853	0.374255586949195	1.28487479005926	0.198836041767418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28800492459038	4.77634977851126
Merged-chr6-115717860-4	7.28568851206296	0	1.30011263888436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58511614-3	21.1412778844771	0	1.28807368574228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81264683-3	12.4289052560745	0	1.31327122626006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117584688-4	7.06367852935262	0	1.2902951332126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52674933-2	5.9681260898529	0	1.33222433860428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53568037-4	10.8298757108658	0	1.30904579618511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95652499-6	33.4338664835344	-0.863496386476746	0.382145169974344	-2.25960303654948	0.0238458989769543	0.214839944098725	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26515494061309	2.89078382335559
Merged-chr12-34787553-6	18.758870193291	-0.746283921251566	0.488571745575014	-1.52748071907687	0.126641518088264	0.737239789843717	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74335180509267	3.10287621859297
Merged-chr7-145122645-8	32.5097942673545	1.05939216018451	0.355453072657706	2.9803995004558	0.00287872680626319	0.0431098240307519	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92656309011482	5.96701159081255
Merged-chr18-39876040-7	25.4476370113219	0.116500343456906	0.318427116642039	0.365861879746474	0.714468142712484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92732106445125	4.99429884802295
Merged-chr2-173538480-10	29.006030725658	1.81693726999611	0.540596307382439	3.36098720095536	0.000776644243795718	0.015572443926074	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39211285335996	3.58990223015783
Merged-chr1-120533195-5	14.1749182266722	-1.13711813303837	0.472258200252436	-2.40783142024966	0.0160475892300627	0.157777834296765	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29908054145378	3.13848883591296
Merged-chr10-118767986-4	6.32143130446353	0	1.2917790423296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116869860-4	7.4185133530086	0	1.30733686856129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37657551-7	25.3446571145574	-1.3148709325806	0.364201082887994	-3.61028836639943	0.000305856773960586	0.00759077734570014	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49058062508697	4.00898325449898
Merged-chr8-41600444-7	26.9845856949639	0.000641104766340845	0.380126700437304	0.00168655547111873	0.998654324066612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36706121827561	5.39076329482258
Merged-chr11-82011976-1	1.35482177335354	0	1.64061519279811	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47445567-1	6.4654586111027	1.24401649572736	0.590137691961369	2.10801057562138	0.0350300746628864	0.287211450303761	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65682287555734	3.79142745250051
Merged-chr11-20899127-3	6.45672178862204	0	1.29019722569348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167224798-2	5.2044035415218	0	1.36652303417206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10213442-1	2.59885091941926	0	1.35863861499768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26463151-1	3.69718765285722	-1.96393422688967	1.19800961992453	-1.63933093209502	0.101144357353186	0.626303342708355	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83916929861869	1.40918939303534
Merged-chr18-52697395-2	2.86968637596362	0	1.39147946649382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70250934-4	10.8690793522978	0	1.29505236981008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129959283-1	2.58067806830622	1.94536424542127	1.36616618115116	1.42395871912307	0.154458422285805	0.847245665433229	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.805218875278971
Merged-chr6-29354912-1	2.52239061138854	0	1.37203765943807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111691453-4	9.82953513051762	0	1.31511407551807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25534337-2	6.19324630138035	0	1.35755274263037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81767170-3	8.45512311928608	-1.13898853142944	0.899789891282282	-1.26583832788594	0.205570969858944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09776781841213	0.683637474991079
Merged-chr7-38061240-8	28.0858772030604	0.760978785109805	0.275236676398189	2.7648160669143	0.00569549006687312	0.0718628101776194	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40184505990535	5.07735559850141
Merged-chr17-27897205-3	8.05449766671514	0.237046417328382	1.28796467178376	0.184047297663907	0.853976350461248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.382164212378408
Merged-chr13-6636745-2	4.4360090406977	0	1.35455007900657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66185076-4	6.88776423423846	0	1.34024434326306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101137975-1	6.78603737880008	2.9564429049859	0.86405505583436	3.42159088708885	0.000622559133883064	0.0130473858764345	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19904754646132	3.15933350138276
Merged-chr17-71693437-3	9.70263544369886	0	1.31811406721657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57407800-3	4.61488378759102	0	1.37218393249889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107853956-1	2.590976387341	0	1.37556983707728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84784038-3	6.65928168875766	0	1.30205839674189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35452634-3	5.15078578295064	0	1.33105646405912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129606463-2	8.90249067527333	0.133066994478353	0.592213525343607	0.224694284719597	0.822217111065723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35404521673868	3.29975322992256
Merged-chr4-88390624-12	41.457429727389	0.490340018876728	0.35282767954613	1.38974362642832	0.164606742036757	0.88457172410641	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17425969794891	4.63067219589314
Merged-chr15-99498190-6	20.1116607617638	-0.291209767620124	0.389420153590753	-0.747803535422978	0.454578669310753	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98990413921236	3.6597719732411
Merged-chr8-56328364-8	23.8693006934907	1.08749071122263	0.421715019451343	2.57873364965153	0.00991632131581358	0.110183970872837	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68773238065367	4.7695276494881
Merged-chr1-184027242-4	11.7449929056099	0	1.29112535429996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113630488-4	12.568523401944	0	1.29062628026707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107757625-2	2.91785932238682	0	1.40580211571392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140514119-3	6.18568023203941	0	1.30292513675599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64297027-2	5.9959138421436	0	1.31289737889198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118098945-2	4.848547035359	-0.891228474148541	0.709667708616898	-1.25583912488493	0.209174303206842	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93869055210894	1.9272926343824
Merged-chr14-67876976-3	6.9819025235167	0	1.30250420941514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100866390-6	54.3760219763765	0	1.28026773597587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31285467-4	9.88530641763201	0	1.29396688829549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6331356-3	5.39615536274654	0	1.30346487016532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3641233-4	9.39708952154238	0	1.29419089179078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7193442-3	4.97800850400035	0	1.35787620109096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120100729-3	13.271413455376	-1.45731091994225	0.555180155311292	-2.62493337703169	0.00866659231978129	0.0992163878290869	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71983175757828	3.44386855405645
Merged-chr11-106418835-4	6.6949799099236	0	1.29263049062672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39545083-7	31.1466126717505	0.979380309133216	0.371356989139793	2.63730140477991	0.00835685423622206	0.0963626251844304	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60699266365936	5.56228206094151
Merged-chr7-119920659-4	9.52292286418497	0	1.30588192116868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35932393-3	5.9716765731278	0	1.31779529543942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6794219-9	55.0702625423597	-0.918558011742854	0.601501801336946	-1.52710766568145	0.12673424107776	0.737496004592002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47799380306377	1.40646071772112
Merged-chr6-66952047-6	14.7388830794582	0	1.29766741182053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103307340-4	10.3595075416792	0	1.29187850884498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-84372626-4	14.1720560765764	1.48951894959992	0.569031278940164	2.61763984639682	0.00885401997460444	0.100962169691343	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84277838749478	3.82386534115944
Merged-chr6-108569618-4	12.9702702454049	2.46753648571319	1.17679542488252	2.09682705552626	0.0360088876366267	0.29314916103935	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-135503790-4	8.77602525344929	0	1.29499621304673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41137297-4	19.1403888902594	1.1281724712284	0.505739955946381	2.23073628643257	0.025698602521723	0.227301147859301	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60060432026774	3.62281396113882
Merged-chr19-43711787-3	5.45096494844621	0	1.30679765920304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45680099-2	8.26922617263589	0	1.3625031661103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38290498-3	6.10616703299944	0	1.30685419543599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183634957-2	12.1325020617184	-0.392568435580403	0.703987173209983	-0.557635778774777	0.577093119572313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72012382086268	1.96073424694151
Merged-chr10-122535348-4	6.60814660710066	0	1.31572845235584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80062862-1	6.63075827863933	-1.07017159220443	0.794088700988911	-1.34767260996373	0.177763705364514	0.935729586817267	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97461752060542	1.2679693671925
Merged-chr10-43758370-3	11.3778547703987	0	1.36999085285973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132505498-4	7.90619383537259	-2.83387311955092	1.07037886143078	-2.64754211958454	0.00810792588602072	0.0939679337435918	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48155357429053	0
Merged-chr3-96570957-1	4.14316044060634	1.44141406506662	0.913724138345668	1.57751558109908	0.114676939815429	0.686573826152472	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.820694648535198	2.08153858449613
Merged-chr1-165609867-3	7.2308385981997	0	1.32624586503101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94478034-4	9.7972141978785	0	1.31070422771936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60670835-6	46.8091450989622	2.69696549367265	0.443275159745301	6.08417917038773	1.17089609540105e-09	2.89897291790684e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8896112802685	4.47541178321623
Merged-chr15-40023378-3	5.37980494951097	0	1.33287433784758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73291826-5	23.654589980757	-2.09016383590412	0.416712197420406	-5.01584510566998	5.28008553694188e-07	4.84276617586199e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.30356327461774	4.27458234172765
Merged-chr6-128838858-13	73.4643480913345	0.993143493761901	0.226829706421931	4.3783660854127	1.19572377141696e-05	0.000583318490193667	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8184452673204	6.79892017346709
Merged-chrX-155247915-4	9.12927211925296	0	1.28624683842025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50632826-4	8.52987139195444	0	1.30167662831834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96917030-8	37.1151182096203	0.546454594003219	0.357984002240636	1.5264776933688	0.126890941617925	0.73788782674623	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86349103366593	4.19724775402749
Merged-chr4-102658758-6	22.8797509016287	0.489105696034921	0.401452347069594	1.21834060656303	0.223094565128231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56999579763662	4.02766237351928
Merged-chr4-40876940-4	7.222076362924	0	1.29965493497459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33156537-6	32.6868918051096	-0.383549182517346	0.499073711470448	-0.768522111467811	0.442177059342144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82120457234892	2.93807335876715
Merged-chr14-103342064-4	7.20091525562742	0	1.30584117117518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68220105-3	4.55415070587038	0	1.30696152105231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120994501-2	5.87056671770036	-2.2142940339856	1.14104244228173	-1.9405886686894	0.0523081896153362	0.382898057421727	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22976796090859	0
Merged-chr15-74939457-8	20.8038433628927	0.0236443526386055	0.358257068764745	0.0659982864263648	0.947379189715584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37591997749189	4.29636240031759
Merged-chr8-33968460-4	12.1396007610214	0	1.2920081063504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-95853669-5	18.5772128497658	-3.2156010883982	0.594698979137696	-5.40710712680349	6.40508369454831e-08	8.52437065384835e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1471393129323	1.87496859647037
Merged-chr11-75594686-4	10.7598550980513	0	1.29017735458959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96455513-1	2.93076371111799	0	1.37816215791587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128359872-2	4.06470443170451	0	1.40899271162733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61564232-2	4.10580075858113	0	1.34969778021514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143142435-4	7.97074482960748	0	1.32780454525717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60031202-3	4.29862059818664	0	1.31856294213403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93590203-7	35.7900610159874	2.01051144320498	0.486352086984887	4.13386001007838	3.56720805813363e-05	0.00139332204283802	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95365098092897	4.21870539772334
Merged-chr4-14922182-4	8.66796418376524	4.38179836435711	0.953352561354683	4.59619928867734	4.30267191191227e-06	0.00025771072296592	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	3.21527596580555
Merged-chr2-57330908-4	6.46161977192167	0	1.30976619833946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133494644-5	17.6960168749853	2.22622199857016	0.465901933359642	4.77830598923848	1.76778219702967e-06	0.000127362178001214	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2383300148662	4.49644437535044
Merged-chr5-21045656-4	7.34825506315994	0	1.32500351407395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46162062-3	6.42866901402978	0	1.33029205010025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143052054-3	8.14571601529333	0	1.3235075635475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17585300-4	6.85704832688083	0	1.31347019830027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161359563-4	12.8001733512	-0.736492521565988	0.55034567423892	-1.33823623231798	0.180819441493988	0.947616266249592	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10994663100166	3.36464606138474
Merged-chr1-191068599-4	9.54562093400303	1.2968027806752	0.83312310249201	1.55655602010825	0.119575932474206	0.708671221064705	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.765888511628843	1.22548804685604
Merged-chr16-36939355-4	8.33026219682703	0	1.28423390120557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111053627-1	5.08406160118165	0	1.35739389073109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20919805-8	23.4895097326444	-0.463431998639861	0.395814126213864	-1.17083238810295	0.241666156424837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2793652565832	3.46554399185447
Merged-chr8-111052316-4	13.992257840394	3.26894555650782	0.844675459024412	3.87006100577777	0.000108808122037871	0.00338579787746987	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	3.39775123870216
Merged-chr5-120500271-4	7.82593742282826	0	1.29110427048494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64962432-10	43.4987143597124	0.120466453153577	0.292109571908985	0.412401594258991	0.680045094825395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2815003420333	5.41740794298946
Merged-chr3-87959978-4	11.8277857763321	-2.41597149545308	0.758683370542809	-3.18442658592153	0.00145041095923425	0.0252945168246921	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98452623739171	1.31470332505763
Merged-chr5-21283956-2	7.49460471866927	0	1.58047626889403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111369891-2	7.53604559754409	-0.374420071975314	0.607695532497315	-0.616131026069322	0.537808046416808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67864942550853	2.62235589016187
Merged-chr5-3501331-3	6.87917780443543	0	1.30176939595937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61375326-4	5.00723430404666	0	1.32394000285754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31233456-3	4.62663884129309	0	1.30907211969147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79168532-5	18.6514040314122	-0.0113754801477065	0.354351063746081	-0.0321022886948574	0.974390478237863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10326849863808	5.11844664820198
Merged-chr7-67962051-4	6.70172168993255	0	1.29228980911775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32087820-4	7.1713845296702	0	1.30300728403763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63385953-4	6.48325217584974	0	1.29214792597615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114886001-4	7.74236241657609	0	1.28553493351856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38082745-3	6.93545771696587	0	1.30118147064375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129491857-3	12.5383732007705	0.964016406944563	0.464157712259286	2.07691562906973	0.0378093469916575	0.303300956115498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42464485794394	5.26533189121912
Merged-chr17-57409870-3	7.06426834017183	0	1.32129154002205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44091660-3	10.7099782139694	-1.27543913347823	0.676285047301123	-1.8859490366794	0.0593018226031595	0.420004162562171	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02023213045762	1.63879159991986
Merged-chr2-148478521-4	13.7272769202683	0	1.31329370227442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192939248-6	18.6813064126879	-0.966652986206081	0.454072507260107	-2.12885160574664	0.0332665397488232	0.276940514269531	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28058994686753	3.40509578775502
Merged-chr4-136140570-6	58.8731466290612	2.875295659613	0.464515785053053	6.1898771842266	6.02111097389618e-10	1.66014986371401e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68566917431335	4.52389878560785
Merged-chr8-41047251-14	56.2933717778304	0.246521739588737	0.221284441741958	1.11404912902195	0.265258110688938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47868765989958	5.78497288520593
Merged-chr14-16454835-2	4.71532097652271	0	1.34804308314269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67709043-2	8.63392343039907	-3.16486710045999	0.78740586828417	-4.01935930113974	5.83566187434082e-05	0.00206380247959845	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00428247710641	1.9094343094868
Merged-chr15-81534732-4	14.60913479059	-2.97679119364165	0.737205313448645	-4.03794050224112	5.39225244765488e-05	0.00192969402214927	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25168304510461	1.46402698790757
Merged-chr3-88488545-4	6.17381138170168	0	1.31227167804099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33138712-3	6.4105402842612	0	1.29876787494172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72153593-4	9.25686547008269	0	1.29761313571186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146822278-2	4.74245781190458	0	1.36156856773728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38190718-4	7.95066122596005	0	1.30290426583751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13554956-4	8.81648613476346	0	1.29550892442688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48558842-9	60.9146312120048	0.164150044441901	0.260287168675846	0.630649775311544	0.528269545399706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31943327940637	5.34012832455369
Merged-chr9-98333358-8	29.2644937508092	1.18241188115586	0.418755045362619	2.8236361430152	0.00474822552376642	0.0625559566685566	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91962039992601	4.5269565692004
Merged-chr16-35047464-4	7.4346237950625	0	1.29292669990587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59959475-2	4.94343542424956	0	1.31790160372629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127004194-1	6.29975584974154	-0.941959356325821	0.678021779176912	-1.38927595728461	0.164748851980966	0.885157257961416	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22023278903877	2.82986663084093
Merged-chr1-80676424-3	7.14201911311142	0	1.29733626943224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76152245-3	9.13748533957506	0	1.29329404339187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174180845-1	4.85694726155298	1.41825214287982	1.41920023838798	0.999331950853363	0.317633912523991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.61242769162773
Merged-chr1-173401572-7	30.7114067806645	-0.539225569576803	0.242473449100863	-2.22385408207106	0.0261582633217658	0.230306908518473	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6734848920029	5.10350873005255
Merged-chr10-21651647-2	4.658738848737	0	1.31833317429828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75642545-4	14.1448701895647	0.546278725043952	0.874660994337542	0.624560519538999	0.532259538372985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10450937279159	1.34591112769102
Merged-chr11-110562504-4	6.5901169172611	0	1.30488386424486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137833282-5	15.8005206470145	0.677289529534678	0.570184593445856	1.18784256418004	0.23489544155187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73142149001737	3.34005910040985
Merged-chr7-75822537-4	9.91318009891219	0	1.29969040512777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125053023-8	34.7458564366814	-1.1893357946212	0.325538866524834	-3.65343716809455	0.000258753128118654	0.00665375628431034	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48280271309827	4.14734594497453
Merged-chr17-80798532-2	4.63482647907261	0	1.31078565300425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39241861-1	3.20844840450142	-2.84976282321375	1.11052494238089	-2.56614031298032	0.0102837219404003	0.113283899851213	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08550056117556	0.382164212378408
Merged-chr17-37017609-1	2.07692919879412	0	1.39679397567547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57745672-1	2.21412699951432	0	1.42301388053148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77406486-1	1.67968492697941	0	1.49203018425355	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32698332-1	2.03739359939745	0	2.14272729199194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99269911-1	3.02224469958193	0	1.3541373618944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92669729-2	4.67014899906699	0	1.3001484360857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99994634-1	1.27133284365364	0	1.68781675294876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25743006-1	2.4815438983778	0	1.34272106194913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50251538-4	7.66781171747336	0	1.39203623440112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42074026-1	2.60700269718772	0	1.42325103369492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13608659-3	12.0230898164943	-4.40224412067432	1.08095743797404	-4.07254158769203	4.65028935444719e-05	0.00171582995991983	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2714465885263	0
Merged-chr3-31100223-3	9.0688011407918	0	1.32586822225608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123130387-1	2.59980648711007	0	1.40528053540843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100837354-1	2.49947691289142	0	1.49307762889868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5402238-4	5.8438398328171	0	1.30372355725908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129331958-3	9.41664874158477	0	1.30926818601162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116238842-3	9.62655623826944	0	1.29454395406006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58554225-9	28.3761099533151	-0.690588676690388	0.406387319020507	-1.69933618587036	0.0892558581998087	0.568808145558127	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67528225189672	3.69327287867033
Merged-chr2-102981631-2	7.72459110159029	0	1.31690325173541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100876075-1	4.49590224529236	0.329190196631124	0.880117306348781	0.374029909713728	0.708382063815052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26292784011254	1.54084633208408
Merged-chr14-46895105-1	5.14661089679808	0.152767285970711	0.923738280405417	0.165379403680947	0.868645363931428	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48390008772665	1.40264952818025
Merged-chr13-110601555-6	23.256804283284	0.0876950321698244	0.397083656925822	0.220847749939521	0.825210982321283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8102724424463	3.67265764069302
Merged-chr1-37317292-4	5.5157179480458	0	1.32113613134359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3221188-8	50.7498554333465	-1.31456697076903	0.276804056807859	-4.74908852828529	2.04335486728612e-06	0.000143267239439569	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59481140181186	4.28763745185161
Merged-chr11-76593853-4	10.3680613682661	0	1.29588668331757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29007967-6	25.1155469345424	0.447242495095877	0.292718511735213	1.52789276101692	0.12653916582659	0.736840877749449	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97856063973286	5.33829404749584
Merged-chr11-48809023-4	7.78884434820407	0	1.31191329551699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120602974-4	6.53721585355961	0	1.29780320515881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9181248-4	8.23905812208817	0	1.30375496577112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33661340-5	19.5836820671729	-2.54432889520371	0.556492028407589	-4.57208507098358	4.82894798100691e-06	0.000282247258288799	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77862448907435	2.38035523516673
Merged-chr3-95609376-2	7.30706730142701	0.265430277071961	0.931008799692479	0.285099643697927	0.775567803016521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90291182009043	0.735627456805112
Merged-chr10-37359550-2	4.66030179047313	0	1.31879957299198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36821704-4	6.92909391507907	0	1.30495250494263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74668400-4	7.45602181290279	0	1.29767162033766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134558945-6	28.3419652018379	0.323628912262478	0.371177645887731	0.87189763674606	0.383264223058038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41885116417854	4.74466169299353
Merged-chr15-84183532-3	6.57733934355103	0	1.31263339382109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56754987-1	4.3671478214217	0	1.33763778847852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-101045928-4	8.97031062270584	0	1.29539307028039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77854113-8	25.4982559573962	1.44786508397634	0.401473883153996	3.60637427421641	0.000310505194818364	0.00767989116601091	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5966893852883	5.05807500243651
Merged-chr6-89050792-3	9.95201161705383	0	1.29767220518258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153174495-4	7.45037287538939	0	1.30323936184221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58632371-6	11.6206695671857	0	1.28322442650075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146758129-4	6.32094092396861	0	1.32508272833052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51692908-3	8.30793695854104	0	1.33461891121253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21424559-6	21.840686955504	1.69702747989678	0.381050968260872	4.45354459442018	8.44641550795817e-06	0.000442613847460333	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08325706230217	4.77687647291032
Merged-chr14-66219083-6	41.4499590910156	0.2126440110772	0.436608861475025	0.487035490665056	0.62623318026037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56041455567778	3.23390106434252
Merged-chr5-138707573-3	9.00319381231806	-1.66519451334917	0.640252975526525	-2.60083838264049	0.00929962540375697	0.10490131566268	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07288948479779	2.10663323369202
Merged-chr1-105997467-4	6.85317849660664	0	1.31070846277295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42094667-5	13.6280671715872	-2.16646674449142	0.518028262815779	-4.18214004910743	2.88777987058682e-05	0.00117573123628266	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66747712044654	2.22392366263603
Merged-chr11-114909162-4	6.52697057268856	0	1.2999910831945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48108808-3	11.6223161572742	0	1.30328244109038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81155555-1	3.17812288946212	0	1.3329233900366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8561086-3	30.8894920990237	-1.47587047677176	0.831290192893474	-1.77539743568332	0.0758322871322952	0.505131155448212	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60584301860345	1.07938469868934
Merged-chr11-24185143-3	11.3066805880938	0	1.28815483425966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32773296-4	20.4147421739263	-2.01255837937309	0.756521798508823	-2.66027810876043	0.00780761533737477	0.091214312726001	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55104905479527	2.82479655090704
Merged-chr6-66395339-3	10.4025396280494	0	1.30180567995908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57728509-4	6.96089842383259	0	1.29828238812267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-48853880-2	3.37955848613899	0	1.40766962163086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49855410-2	3.27940774935288	0	1.37745297229113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31382562-3	6.55972678851012	0	1.2965147128581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98880519-3	7.63437955520654	0	1.30107171319597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138231669-1	3.26453750368612	0	1.40472049740515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59009300-7	20.768387270022	-0.317010243612261	0.410845408726458	-0.771604688476213	0.440348596559401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26118812984537	3.81544653180065
Merged-chr4-139602827-7	24.7103132658392	0.6134888837244	0.438958033454618	1.39760258832995	0.162232440673422	0.876258507156756	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26368148187392	4.64208540149377
Merged-chr12-117379292-2	4.01071260082038	0	1.31847446019345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90645114-4	10.2595086744784	1.92581882868165	1.17179133572375	1.64348273448547	0.100283094713764	0.622149350343264	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.733321818366247
Merged-chr6-32487587-4	7.48833543012967	0	1.29080368309601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77519352-4	9.0097426623811	0	1.31178203524524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71866105-6	19.3792820829964	0.207965236631148	0.363451958775961	0.57219456824923	0.567190166959664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38692016651967	4.48027116619374
Merged-chr19-55655697-3	10.4986901866079	0	1.29866728533834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95731232-2	3.85099009960294	0	1.38774308941448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149103655-4	9.10982347040813	0	1.31811840321407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13189755-4	6.86040670744489	0	1.29533906889011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148795974-1	5.12727126919295	0.862743169028462	0.945292992231951	0.912672765077229	0.361414671857459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16231205897763	1.52696130946871
Merged-chr5-124075726-2	3.34982014695931	0	1.31981040128936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80960706-4	8.36923134499052	0	1.32343658571605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60055345-2	2.52251067298464	0	1.36982844089619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58723100-2	4.31000839755207	0	1.3259685324836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13292625-4	6.67739178774401	0	1.301082448011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53134232-4	7.35986547152493	0	1.29062605664197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144123272-2	3.21460010989829	0	1.4790688693203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33047545-2	3.25401422295799	0	1.40338239745575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59710071-2	3.44497690180818	0	1.35058828102787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128797034-4	6.62209287272844	0	1.30645912713676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57844669-1	2.85101136537928	0	1.37812824986054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110597646-1	2.90930958258767	0	1.37470154085322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65745668-6	15.0126088976246	-0.448991127314926	0.498397653522573	-0.900869264013481	0.367657834993438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09432955167384	2.67584566669381
Merged-chr3-65515842-11	52.8704418467971	-0.23379312983129	0.249446377714471	-0.937248044944155	0.348630981201718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45023248617947	5.23076575365161
Merged-chr6-47188435-7	26.047581694046	0.686042345023365	0.300931794011413	2.27972703009688	0.022623883134233	0.20640887331144	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90334794029192	5.64190790585821
Merged-chr10-126502559-7	35.5892787324636	0.890579220685422	0.36409509557019	2.44600718746495	0.0144448120860702	0.145777712830323	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22721704785504	6.2693055285647
Merged-chr5-118645351-4	13.2682074924099	-0.846760642967467	0.744621554264765	-1.13716912721329	0.255467590357398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12929799082164	1.26501898168246
Merged-chr8-80338106-3	10.430578232904	0	1.28770455058337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155710729-4	10.5890996348266	-0.511359332635291	0.61764349273786	-0.82791989011098	0.4077158698051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88895151258639	1.98733255708278
Merged-chr7-139208216-7	23.7409605973311	1.134315096601	0.309589226819462	3.66393594587992	0.000248368922117349	0.00644811902450547	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21016150520681	5.38443087077868
Merged-chr10-118599819-2	6.28086000562953	-3.25962553422496	1.08029375635693	-3.017351081633	0.00254994295719283	0.0391146883757564	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02668348392276	0
Merged-chr6-134253787-4	15.4568721278172	-1.62490701544075	0.498818607890996	-3.25751082605128	0.00112393971059361	0.0207647623207379	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94961503768402	3.39186914153004
Merged-chr13-105311285-3	6.98621060557384	0	1.30626983216975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170119421-3	5.41300688670599	0	1.32990107585707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118636974-2	7.52592630215375	-0.00643688182113159	0.888028986094657	-0.0072485041839	0.994216581067051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09965232855104	1.0023426291647
Merged-chr11-58282732-6	19.2137785204216	-2.26706101888815	0.518084757450246	-4.37584967765793	1.20960357203973e-05	0.00058855364868584	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6887753393518	1.68041597300842
Merged-chr12-33176093-8	38.4049520481084	-2.69221174473833	0.4345428902953	-6.19550291781048	5.8099216184887e-10	1.62245785505027e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44087710597966	2.17585887006086
Merged-chr8-126590200-9	63.6114207008334	2.31253658926121	0.320286372290387	7.22021537389841	5.19053012689694e-13	3.99035743143773e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0916827656496	6.48107242939276
Merged-chr13-49169980-2	4.36939357470649	0	1.32297417665322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32064141-3	7.34382589136932	0	1.30933997777285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113600106-3	9.49447354287174	0	1.28797924325839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56981330-1	3.39521042520905	0	1.33470691234221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59616113-3	8.66716519405025	0	1.3026506635903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20931423-4	7.57393933347183	-2.63014826222421	0.846712897068139	-3.10630471241369	0.00189441392395622	0.0311662568667782	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54831764975218	1.00443616959195
Merged-chr3-109452175-1	2.35084447596758	1.98973395263413	1.34274217531623	1.4818436399866	0.138381904261361	0.783460744746397	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.73596151290311
Merged-chr1-77459831-1	2.54450619050512	0	1.42948156984696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98692393-8	23.7574742159472	0	1.30204451914398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81375243-10	41.6467216139823	0.168198131333651	0.25137993490273	0.669099271581617	0.5034321546038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46870268825947	5.60370995527289
Merged-chr7-142392818-3	20.2482014188106	0.00659322280264738	0.463454517453605	0.0142262564164291	0.988649472513946	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11777957040831	3.29352953322432
Merged-chr7-122305612-4	6.81017453065939	0	1.31952848740542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125103311-7	22.4596972029452	0.624212108796977	0.310891182089848	2.00781541824682	0.0446629098053915	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47797288619693	5.09571522539526
Merged-chr18-56490912-6	38.7784710853806	-0.0396447151353453	0.38850429340595	-0.102044471086244	0.918721376474027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93529963314298	3.84856480171051
Merged-chr17-50120313-8	75.8730041498628	-0.104691892259193	0.355877842792618	-0.294179293202585	0.768620902573055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12570857891992	5.07499046871107
Merged-chr17-25732292-7	31.9588695192087	0.277847174816734	0.346655685566495	0.801507623804539	0.422837832282636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45666153619752	5.30831364823424
Merged-chrX-10318415-2	5.12305798942228	0	1.37455637116762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39968893-2	2.90721786322693	0	1.37280018173971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67302075-8	26.7167951997604	1.78444051684125	0.372676456007059	4.78817614603335	1.68303893837731e-06	0.000123019980388371	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88882726501563	4.98718869377876
Merged-chr2-90749853-4	6.75978801295674	0	1.32432530406201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126837489-4	9.8877548757387	0	1.2853617902087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14035050-5	15.0697710093368	0.375404918122195	0.629697510328865	0.596167067464086	0.551063623647931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18984808656879	2.99247473828349
Merged-chr4-119959554-6	32.8762490729383	-2.36030164309828	0.362775444538415	-6.50623320467971	7.70585705842504e-11	2.81311137061364e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04904305305552	3.60694727275576
Merged-chr14-102811247-3	5.95364863441276	0	1.29420559405165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78924799-3	7.99056844243232	0.317673070310433	0.522122927128819	0.608425820442962	0.542905090718239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11745256491083	3.37861092065192
Merged-chr13-107860211-2	6.00660962229784	0	1.3151875497355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65380707-4	8.3165616955844	0	1.30630406086248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112994623-3	5.97998900270904	0	1.34016233280859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80163939-4	8.01583111381864	0	1.29788139969271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156278842-3	6.88060649407806	0	1.31143112246568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78298844-8	25.5637412683901	0.286012723619416	0.417493021736226	0.685071866423005	0.493298572309779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4650229503547	4.82377268766083
Merged-chr4-102513823-3	12.489385278992	0.152503083093621	1.91179536374549	0.079769564246063	0.936420531374798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr15-67352563-2	6.97203063301619	-2.74008089327288	1.08373039831202	-2.52837873473027	0.0114590664365528	0.122976540542451	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92032806583171	0.581381506691384
Merged-chr15-85091544-4	7.9414759781926	0	1.28949333306997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69607141-4	18.7608335986258	-0.112280986115167	0.413299280795984	-0.27166992862635	0.7858758254055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89229073147343	3.80188437870856
Merged-chr12-12208418-2	11.4774248785082	0.689412490648509	0.779623752530537	0.884288720566534	0.37654037556256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43009708706973	2.05066483796074
Merged-chr3-81050031-5	19.2565435223866	-1.05773726474124	0.368078670429578	-2.87367171671962	0.00405730450295699	0.0555592246542807	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85393057828582	3.82111522652745
Merged-chr11-110986291-7	23.4049005990224	0.789447590504834	0.353289810204329	2.23456088373522	0.0254461912761882	0.225448602125768	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04281193778028	4.55271884868297
Merged-chr4-137838010-8	39.5868616850129	-0.657663644686839	0.280026344769366	-2.34857775695534	0.0188452639302039	0.178965646967462	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11039315762181	5.3833416506777
Merged-chr14-40924938-1	1.86919145124639	0	1.36073095825256	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94364864-4	6.74874438357133	0	1.30427056585247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96396241-1	1.74420918956922	0	1.49168714433159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103166623-1	1.76917947581949	0	1.68039248445946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98907285-1	3.46340639541643	0	1.37167856413406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34457411-1	2.98055312612235	0	1.34656428324757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17380287-2	5.08644299934654	0	1.32087661104147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163745325-2	3.05516745043501	0	1.4912518466887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126667083-4	8.53168146196471	0	1.30738648907784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34938144-2	3.09734227606001	0	1.38820649881412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15790243-3	7.09595556205382	0	1.30373980963973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32728956-1	2.12461341278776	0	1.54444514143511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108517794-3	7.82735649973178	0	1.3050095916934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119056725-4	12.2548538727677	0	1.29540580099326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59620478-1	4.20348122637908	-0.528618348443546	1.04405536119491	-0.506312565493221	0.612637243296424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88791530139617	0.845523456341755
Merged-chr4-59471515-2	3.26685768393139	0	1.36100247748701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36695977-3	7.02902734923833	0	1.31778280507122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128667361-3	12.1992583140967	0	1.29156960857215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28675239-4	11.1316957227901	3.01294777536624	0.96277252845747	3.12944925858397	0.00175134317102074	0.0292732544314603	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.50224159696657
Merged-chr5-146299597-3	9.61936552369488	-1.29982807481199	1.02467776115425	-1.26852374872253	0.204610975250474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29180995470528	0.469435083901436
Merged-chr6-28293302-2	3.75112795833281	0	1.37783557771517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72223095-4	8.31823302586291	0	1.30104154318237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118680436-2	18.4500976493806	2.843534110155	0.410712424259039	6.92341877722591	4.40871970133154e-12	2.3809272529191e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97009983551076	5.77426538480606
Merged-chr2-35271947-4	7.70882223102545	0	1.29430208833623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30013248-2	7.30445766207653	0	1.32309613896755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52331594-7	40.9058018340156	-1.83091264545594	0.276470429365205	-6.62245379970597	3.53284497556767e-11	1.52885621042017e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.28225129037336	4.43023197966433
Merged-chr19-17255177-2	7.43032792978889	-4.44455923553213	1.02747792148835	-4.32569804428886	1.52049589581547e-05	0.000707680376125053	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51293860678496	0.609949614787909
Merged-chr6-86654659-5	11.8029503321832	-1.87295879437853	0.851744868850471	-2.19896692410523	0.0278802742628099	0.242204786224086	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31790685037478	0.916190436775555
Merged-chr7-27508785-7	16.6318960499777	-1.31428903512711	0.474875003230723	-2.76765259528421	0.00564616063646609	0.0713920303696813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3967555021159	2.93700308299504
Merged-chr6-82740422-6	24.7806836949429	-0.602385229910885	0.442176261520784	-1.36231924309797	0.17309715728857	0.918639392526506	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46956075641473	3.68214485114944
Merged-chr3-8685446-4	10.2451368420027	0	1.29737838011122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119980036-2	7.03228072604481	1.24414293650339	0.949332439866657	1.31054505698567	0.190011512165906	0.981929005456174	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	1.45391938817053
Merged-chr8-3330916-2	4.77881786172713	0	1.30710686629644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47032486-6	13.7978701985373	-1.05398329820722	0.516718927822604	-2.03976135081521	0.0413741010195577	0.323710728594829	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7576619259689	2.27306840521062
Merged-chr16-55789592-4	8.77930136273989	0	1.31700295704268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71444377-3	5.25425979114316	0	1.31507439960243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156417328-8	23.116701335929	1.63295784858813	0.371902818088019	4.39081870092647	1.12924668547419e-05	0.000560727613290245	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.068948639265	4.83880559252686
Merged-chr15-7878167-4	14.1803392268034	0	1.31846452891896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36771714-3	6.23644356850151	0	1.30635682307402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34683619-4	6.12981536229482	0	1.30583869512896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53437386-4	8.20293932804103	0	1.29099562303763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58546266-8	22.4078797875788	1.50362305353004	0.400652339682889	3.75293715923421	0.000174774679046641	0.00492064893450316	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39602228886892	4.93668628953206
Merged-chr11-50114534-4	6.36838518614881	0	1.32676860298843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22301793-6	17.7389847003321	1.41685902271581	0.485835596238115	2.91633431903039	0.00354170771361356	0.0501161611636622	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46840848279031	3.35581291318951
Merged-chr2-58534589-4	8.17321070168179	0	1.29564280840804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135299191-8	60.4233303619835	-1.91608805269787	0.354975848029195	-5.397798366666	6.7463623189603e-08	8.87017690331548e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.32254864619032	5.31950303420092
Merged-chr11-63898879-3	6.07731675449289	0	1.30779171304796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124513044-1	6.34811921469717	-1.72027313926387	0.77050206900923	-2.23266517827256	0.0255710324078893	0.226387303038333	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29097023153693	2.43545481046358
Merged-chr13-34277869-4	7.50930498380671	0	1.31021049450369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58857019-4	6.19751249743647	0	1.3279070803931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5260021-4	12.6450866355297	0	1.28739594403308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53612248-8	32.6474128773791	-1.1603902083291	0.348995549775835	-3.32494270793548	0.000884367059726717	0.0172868231782537	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56812599649673	4.31350680698951
Merged-chr16-27376756-2	4.76874455246882	0	1.32035575757096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60525464-3	14.2879080597806	-0.149575773817643	0.569118599912432	-0.262820041096279	0.792689287852118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17206682414626	4.14041680153139
Merged-chr1-182528619-4	11.5969673490996	0	1.30264831345837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15276380-2	14.4167925750208	-1.16523839436387	0.427112314792643	-2.72817793823056	0.00636852445061883	0.078413694327859	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43729904080691	2.72306184695813
Merged-chr13-6633653-4	8.15025134981738	0	1.32285238982259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132155936-3	8.28402266608917	0	1.28643097366121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21128679-3	4.54915409837386	0	1.31184466782482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26791997-3	9.03687351017992	0	1.31876412205632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122735516-3	8.30938453775974	0	1.31792748393916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86947581-7	44.0541672920133	0.638960540782026	0.232891089265779	2.743602354201	0.0060769100242486	0.0755520857010177	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.8381653544143	6.47423002687115
Merged-chr13-78236856-4	8.08023776858677	0	1.29228878189322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65201654-3	17.3298442731323	0	1.29512906358349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22494101-2	5.48712363576248	0	1.30029699103091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35232824-4	8.43559070925989	0	1.2926341788157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78139889-4	11.7743614672051	0	1.31727105460606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20116875-3	11.5739529974524	-1.36760791271998	0.634304159552418	-2.15607590163842	0.0310777388734394	0.263632979109153	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18486977793107	2.30883726329241
Merged-chr13-102846682-4	8.37266528956475	0	1.30245309262465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31135768-4	6.66305909144181	0	1.30313666103501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152165387-7	20.2369727258924	0	1.28021918883314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117360733-2	6.80115378384463	0	1.32342833913918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51509466-8	28.0699064427635	-1.56320870554199	0.344544613829982	-4.53702842185009	5.70524201489941e-06	0.000321392021297946	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71843780678562	3.38549258776799
Merged-chr2-121418708-2	8.40944343944347	-0.773064799968636	0.571625786933016	-1.35239665116652	0.176248460154445	0.930254226819484	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09833170491762	3.31021329933437
Merged-chr7-4950766-4	10.1698359566468	-1.99001034573776	0.634236631490605	-3.13764649805983	0.00170310141694602	0.0286241937221591	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87912337510821	2.30945684676081
Merged-chr18-50066178-4	8.0828159290089	0	1.31918486282393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64463789-6	24.9970577639732	-2.44469621407236	0.641645889426161	-3.81003954729408	0.000138944564135197	0.0041064999945629	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.974723680968	1.26501898168246
Merged-chr1-131990640-4	8.27380534386432	0	1.33376576800261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116191582-4	7.4696042870825	0	1.3052127450984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16349486-4	7.59838486867377	0	1.29885891157108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52296963-4	7.55396367472091	0	1.28762526478242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81767741-7	19.7804219822834	0.329372963491505	0.513578014327321	0.641329952418064	0.521308332823149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77024647211802	2.5278814224759
Merged-chr19-37503193-8	38.3858822281223	0.247404823204536	0.302940276836162	0.816678540695791	0.414112157884242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37736970257471	4.60038082274368
Merged-chr7-5083990-1	3.76397985131913	0	1.38930336441132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166676665-4	6.41166322918379	0	1.31985660828225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106736439-4	9.05803069116205	0	1.28964304499249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44474396-4	13.2583412888423	0	1.28472018576213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91280130-3	6.65741633491815	0	1.36167101578508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8082901-2	5.07667680753261	0	1.32273905175629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52470375-2	4.39633260590922	0	1.43111260724632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104292752-2	6.79641543649695	-2.75401522426028	0.840537668550412	-3.27649233021268	0.00105105167367951	0.0197703001347903	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85822935350988	1.38660038197036
Merged-chr13-5837565-4	21.8056321220833	0	1.30565447539963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113636491-4	5.33938526374615	0	1.32823466392256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24966408-8	33.53706823086	1.55976660746032	0.253351504664342	6.15653184900878	7.43552272235756e-10	1.97512873095601e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33062456738831	5.89867476698126
Merged-chr1-186584096-4	12.9116590531412	0	1.32002890036831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24434209-4	4.97715792062545	0	1.3167129172525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135466062-4	10.5065360287215	0	1.29837642242142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63243836-4	18.9482015874664	-1.37966112012031	0.647226578530228	-2.13165090230589	0.0330355558431623	0.275926432809121	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33821469961047	1.88086620139027
Merged-chr18-65632113-3	11.358182460727	-0.264094450588776	0.812697324839546	-0.324960403482215	0.745211040101464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37740283999625	1.04885222765555
Merged-chr2-181282371-3	7.84886842077582	0	1.34261376230757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181238987-3	8.18627012886553	0	1.31554297957055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32040208-3	7.22097244586194	0	1.35499066069796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144300835-3	5.07988738704064	0	1.33020166922546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41263820-3	6.47398849608241	0	1.32520003689202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102011303-4	5.95802358856496	0	1.29664447657771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84099868-4	10.7375684816981	0	1.32083525140197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120093722-7	22.2596373244027	-0.344190845821226	0.348605927342692	-0.987335035995743	0.323478420276922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6098368390357	4.26640917230535
Merged-chr9-63589466-2	2.93289109980559	0	1.3947677592679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35019108-5	25.007860694295	0.550704321299563	0.472148664832626	1.16637907150449	0.243461216330897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47484394312437	4.93093683901674
Merged-chr19-16029559-4	11.8538475290318	0	1.2892479665775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118518864-4	6.90193654786527	0	1.29069109495701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34190255-2	8.13260575711157	-1.36495906704669	0.796801507340939	-1.71304779731377	0.086703746621588	0.556558758641135	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52167737867991	1.98733255708278
Merged-chr12-17682434-7	50.1531734414181	0.0226189954757416	0.323513278140973	0.0699167453209918	0.944259924906494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20284310533303	4.48212224062172
Merged-chr4-105253817-2	5.85867631080604	0	1.30250996505444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67147630-2	16.1207880984416	0	1.3049049933539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37140336-2	5.43238107470281	0	1.32276956521589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11553714-3	10.0265634314121	0	1.40403934386476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65983015-2	4.48353718179752	0	1.33942229171972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21499293-3	7.49504160750298	0	1.32923943271611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18936902-3	14.771393099473	0	1.29494815729099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49132954-1	4.61200625440094	0	1.32215848255459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38598774-1	2.93619288833062	0	2.34853006600954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109271988-4	6.43227094833693	0	1.29376412954781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77252689-3	7.0129350199886	0	1.32038219079916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135977077-3	9.58046423493476	0	1.29417603430926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76114825-4	7.77517561056682	0	1.31340984327784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25436288-4	7.60518556718285	0	1.30159739819051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130284054-3	6.49730394843078	0	1.29312774130347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47716364-8	33.662832026589	-1.15146867886215	0.326329855035758	-3.52854224366318	0.000417855248288493	0.00960097364791135	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97358241052498	4.78412258643482
Merged-chr12-26437978-2	9.88409756054677	-1.20043271574359	0.696162514491107	-1.7243570154321	0.0846434123549525	0.547065892752498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55519139846354	3.06008092031641
Merged-chr8-119422144-3	5.39666262100016	0	1.31949184933955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83575958-14	66.4041168279643	-0.391958353259554	0.225333963623374	-1.73945528209266	0.0819547114790292	0.534259035944597	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.55824860032993	6.19020427320443
Merged-chr11-78277493-3	5.54529377148255	0	1.31952562110497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33332199-4	7.54370487638333	0	1.30745246892241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11168160-3	5.41655804737314	0	1.32447155822102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79236414-1	4.91646251568328	-1.19847989280196	1.26382758415218	-0.948293824118382	0.342979894041245	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	0.423054662900563
Merged-chr17-26231220-3	7.79242286448568	3.99453657777419	1.02899623233883	3.88197395892785	0.000103611975006016	0.0032603479049611	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.15292080626044
Merged-chrX-166757281-3	6.46179194854762	0	1.31165329352434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185193741-8	23.7094292994793	-0.0175415941913459	0.333151959151028	-0.0526534324938302	0.958008043007077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93227088259424	4.87951744212479
Merged-chr19-41495645-4	12.2845970668484	0	1.30420126501813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-139042735-6	31.1008714860561	1.7848295422534	0.474053880105693	3.76503519358486	0.00016652562569437	0.00473945275985379	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0682801067623	4.07704065467007
Merged-chr12-85305701-4	8.90119009850323	0	1.29158078620809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105507889-6	29.0757727230976	-0.350441649064311	0.396267344182765	-0.8843566198649	0.37650373261233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05591466861924	5.68838921282131
Merged-chr18-79981099-4	14.3689907191121	1.62088287117376	0.484410304114149	3.34609494762483	0.000819583261039341	0.0162736213235724	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94417519920867	5.08527332459365
Merged-chr15-99105521-4	10.9253934198045	-2.34276883400398	1.34858591738265	-1.73720398812324	0.0823511712365226	0.536308514612498	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38455578581448	0
Merged-chr1-183633867-3	9.55482270479134	1.71114003671541	0.732750126067988	2.33522994516229	0.0195314115910188	0.184037436456628	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24838157500853	2.44575596919856
Merged-chr14-66186276-3	5.27727835716822	0	1.30559264344191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65575035-6	30.4901179667178	-0.00450136580147726	0.370977518785016	-0.012133796722291	0.990318868489202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09666724570667	4.91939876920602
Merged-chr3-79002706-5	17.9589194006445	1.93862646339306	0.428379745063893	4.52548582357439	6.02569208146817e-06	0.000337697148160908	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51880763289125	4.84669784236222
Merged-chr10-93365465-8	44.6060277382214	0.0834353972386604	0.215473041656162	0.387219656794939	0.698593599051034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.21298906331941	6.26706522172637
Merged-chr13-52610686-4	9.76808370879169	0	1.32823652837015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69544052-4	8.20069295989338	0	1.29565832484704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25282295-4	11.6004472506058	0.901109114070298	0.537729410203632	1.67576683917857	0.0937838718757426	0.590860093674535	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08053561687597	3.10572669506988
Merged-chr14-77864267-4	6.69990744758104	0	1.29427067959698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-26410611-2	8.02266551372911	-5.24964594911419	1.13161775539011	-4.63906290274178	3.49992524520492e-06	0.000219487634427218	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71165445210927	0.382164212378408
Merged-chr13-60724189-7	43.0553259889812	0.980785291979303	0.343385774008388	2.85621993168344	0.00428718050523179	0.057810585492133	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35879926393463	5.38153097345002
Merged-chrX-157644482-3	12.0525120048479	0.358968184841189	0.380822802171629	0.942612109343731	0.345879343660692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7882550440947	5.18263511273756
Merged-chr18-62186631-6	19.5119822281163	0.202043003243442	0.38200336528288	0.528903726002062	0.596872237112317	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90278308613388	4.07869587197447
Merged-chr8-61586786-1	2.65836056815704	1.20179403193014	1.13048195909735	1.06308112416914	0.287745163695692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	1.15307255889252
Merged-chr13-70641577-2	3.70820334768888	0	1.31929047751757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18931640-2	8.29378638866884	1.23927674119216	0.714276748960635	1.7350092145593	0.0827391731014948	0.53808459449545	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20203964482637	2.20491078807447
Merged-chr9-53130602-1	1.79736403148661	0	1.4981719518441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148981964-1	1.87790717728453	0	1.44371791895766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22793890-2	2.82792831337899	0	1.41499290564909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73572768-4	11.1286527951681	0	1.28592437824819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85257172-1	1.08428206614829	0	1.76474889023225	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59223502-1	5.88169570515242	-0.239780128636357	0.791574357175064	-0.302915482876522	0.761954271739999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96268508418009	3.01077030735144
Merged-chr13-52985934-2	3.459961790078	0	1.37318960974749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104404606-3	10.0474743673611	0.183054897882995	0.559319720491165	0.327281322607837	0.743455117671102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21250853389759	3.48644807420637
Merged-chr13-113382986-4	7.08870682154289	0	1.29508873223532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127320486-2	7.43126256316063	-3.52936041786488	1.45301006924948	-2.42899928400901	0.0151405622361076	0.150727480176827	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21995775630171	0
Merged-chr3-109491757-1	4.07825743861741	-0.230872230377867	1.01278941029847	-0.227956797366028	0.819679826982857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34685095418519	1.20275690226768
Merged-chr2-68787929-2	3.59022928846853	0	1.37209296752565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-36848289-1	1.43358040610022	0	1.61075993274849	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32619702-4	14.7068760239602	1.3967202738465	0.583409362575335	2.39406557975172	0.0166627692208112	0.162509719086155	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88764447222108	3.65715691905728
Merged-chr12-71912227-2	6.59212810850869	-2.19978079453952	0.882977008332167	-2.49132284734643	0.0127268416325922	0.132999870993662	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92190275725402	0.73596151290311
Merged-chr8-34759170-2	4.92721881675284	-4.05880125526257	1.04203794012158	-3.89506091763705	9.81740531697937e-05	0.00312027318989948	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53934740795205	0.469435083901436
Merged-chr3-117309093-1	2.1149664987807	0.103854072749169	1.43168899760395	0.0725395479905044	0.942172533605599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr15-96770533-3	3.17168911884242	0	1.38932630814026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28363740-1	1.82077557616478	0	1.5665273352361	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57762700-1	3.77662710824017	0.0346354171006316	1.03401988082008	0.0334958908847692	0.973279142593803	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05171748957277	0.683637474991079
Merged-chr18-53850018-1	1.46882748985344	0	1.47496142339716	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149163097-2	2.90884016017802	0	1.39363589448579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73004537-4	9.58056305964374	0	1.29268714454869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43722246-1	5.54023375989054	3.03317612250865	0.790270493788361	3.8381492746469	0.000123965117202447	0.00375724700775099	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2402933426348	4.09130938610903
Merged-chr11-97357809-1	3.32032194098628	0	1.39151164000156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54586286-6	9.65862465317076	2.07707372887572	1.06187499405415	1.95604354609165	0.0504600245535083	0.3731734681387	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.29948469469889
Merged-chr2-129911665-1	3.10771254819325	3.20858012246276	1.20913376206862	2.65361883285224	0.00796337252270935	0.092725328023693	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.88086620139027
Merged-chr5-115510121-1	3.47111937120605	0	1.3101970367933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120666764-1	2.66387937126118	0	1.44238887419327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133207015-6	23.8123919500291	0.597035420755582	0.389295361417233	1.53363096488504	0.125120466058204	0.731186011003344	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02430027286477	5.63532903711656
Merged-chr12-40470549-4	7.52102909232106	0	1.30709761432078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44419291-9	40.3108694374949	-0.571950363043234	0.250505495564522	-2.2831848928277	0.0224194796182635	0.204955696017774	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66119080297135	5.10862648086389
Merged-chr13-54818959-4	6.33576227812931	0	1.30016597915114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105594726-4	12.2862911344294	0	1.29267512071385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19300689-2	9.05071418986224	0	1.31479607301127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-3697699-3	11.235583656978	-0.288328461757181	0.82210216069504	-0.350720963333091	0.725797696893355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59740342420172	1.64538595732494
Merged-chr2-90538771-8	27.3280788803019	-1.01989212860713	0.343938751122923	-2.96533067378216	0.0030235773993736	0.0445800290477137	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.81019473946496	4.72578413461402
Merged-chr13-58622796-3	8.5430763024044	0	1.35369643800754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114209091-3	5.7963901209717	0	1.30305722102552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137954322-4	10.8083145378594	0	1.29317109361592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34340656-4	7.12450362960561	0	1.3000920357375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5184354-2	7.94581771517919	0.189110339555532	0.811830743072943	0.232943062539996	0.815805619006531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43542835020749	1.77128661274154
Merged-chr5-62753020-2	5.2137537702712	0	1.31613448706602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95957323-6	50.4949295638927	1.54142641190217	0.411475788554492	3.74609261292669	0.000179610305332128	0.00502432149496287	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83919692188429	4.49050759802682
Merged-chr3-144679358-4	11.8202967433163	0	1.2867943273406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72106407-4	6.06605188386448	0	1.29696082905009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19008037-3	15.3781582919766	0	1.3064758917579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101503763-3	5.97596274249335	0	1.3018547107099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137866472-7	23.6345194873714	2.38187166858331	0.434715660980079	5.47914851563734	4.27377526296499e-08	6.08440344953616e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19947897094624	4.85213502251588
Merged-chr12-113216117-7	27.4625052899585	-0.567336072034042	0.331371989750189	-1.71208216017817	0.086881528508918	0.55736897329116	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7285637362342	4.90041892979792
Merged-chr3-107062871-3	9.47593488711211	0	1.31500600755886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108843115-4	7.60137742682363	0	1.30387133785108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-40529107-4	7.0169552419507	0	1.29849251676902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10978171-3	6.07220148275189	1.3067146203619	1.29501942518114	1.00903090328481	0.312959813631574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-103927659-3	6.42175581888524	0	1.33151811858327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31898695-6	25.5219729053978	0.849764413586478	0.421054327975117	2.01818235113046	0.0435722735239261	0.336278940084384	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62001200093356	3.69748855883859
Merged-chr11-119954434-4	11.4173926579105	2.43348573049159	1.18105677326357	2.06043078163569	0.0393573767293388	0.312800673772242	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.851599296279844
Merged-chr5-7994226-2	4.41435478726161	0	1.34275759305089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101696400-4	8.72968593233384	0	1.29818819330834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101583370-4	16.8085825746856	-1.04843365167001	0.357259332920918	-2.93465713855009	0.00333916429491027	0.0481042835130526	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13932210331486	4.04077888210852
Merged-chr10-118086009-2	9.27805495109905	4.22779099746733	0.849137217686774	4.97892556044677	6.39382265166419e-07	5.66896413044806e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	3.89399996912497
Merged-chr17-80706605-3	6.01982062792684	0	1.33150748861135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20595602-3	4.67460276656568	0	1.31308009285676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43655046-4	12.6965685931753	0	1.29678320996233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47690064-3	6.38170343489421	0	1.30194020682044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60381893-4	7.45255543955257	0	1.29110925411674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133854885-2	4.26372921562125	0.469370159569617	0.80640255613939	0.582054404461094	0.560530035876104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36572680054131	1.72320011534497
Merged-chr3-8916485-3	7.38153052661152	0	1.29619113699088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30835964-3	14.6350835129242	0	1.33070039690755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84804628-3	4.03197983390393	0	1.34277990899549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59312839-6	31.0772440279973	0.0464634627182934	0.500074626267752	0.0929130579271098	0.925972631898706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3603895630112	2.96384058082504
Merged-chr17-50393502-7	22.5141007170715	1.16973801748198	0.487155378538892	2.40116001796047	0.0163431880030643	0.159946377601953	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47646084988689	4.62682678624445
Merged-chr12-32827189-4	6.09895950145797	0	1.31476075006417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40650306-6	17.2775770199448	-0.657123219834368	0.358710126902074	-1.83190596125478	0.0669654322680288	0.460139131123723	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43418650120272	3.60265785215056
Merged-chr1-191116053-4	17.7274518113212	0.724654774948228	0.477852849079044	1.51648101783811	0.129397766583461	0.747618738004601	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68684315379106	3.54318759211267
Merged-chr5-21210616-2	6.69508946451794	0	1.30007763409092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104296871-2	3.52089438214523	0	1.34053535735592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4493011-4	8.56607492419872	0	1.29897122298197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34761566-7	28.4894511357524	-0.66137539401521	0.419327925983259	-1.5772271604959	0.11474326556983	0.6868199534603	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83478828301826	2.62109550911
Merged-chrX-106139566-4	11.6442387131769	0	1.29332498759646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46904036-4	8.95120052178933	0	1.29559468150008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138740343-4	7.33953228416423	0	1.2874367440511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48858159-4	7.77112361819481	0	1.29445139756859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63277226-6	20.3185449641807	-0.283989468085819	0.481273466236587	-0.590079212773832	0.555137544413229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.012748179197	3.72359028120165
Merged-chr13-67844272-8	30.3751360492067	1.04570665733443	0.403751756107681	2.58997426392751	0.00959831074298209	0.107564948346923	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0551370140566	4.01365877018568
Merged-chr6-83652218-2	5.20095896105869	3.92107096117588	1.19783206930484	3.27347301984617	0.00106234532016287	0.0199177843004744	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.00098049458557
Merged-chr2-37772058-2	7.27650609483966	0	1.28824135528553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148987843-4	10.1841974033035	0.863662689060968	0.892539022768764	0.967646979043877	0.333220706343722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	1.31734301959449
Merged-chr9-63613777-2	5.38590166910996	0	1.32705349897278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62502163-1	3.24824414100211	0	1.35748921327629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-12160873-2	5.18194942168631	0	1.36880976616245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79533887-1	3.15340690768498	0	1.32153440684897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52625351-2	5.42443682523398	1.9490669023431	1.28037417582274	1.5222635219823	0.127943064312542	0.741974394796539	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr1-144000822-1	2.74331747020199	0	1.34234193756432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185248907-2	4.44051983593647	0.0463715718296928	0.671598342653211	0.0690465846691904	0.944952538748209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86591058551374	2.75824014947204
Merged-chr7-133047777-2	4.46625367168165	0	1.30614655644764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31715901-4	11.6564357908935	0	1.30218217772371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119713260-4	8.78200853099434	0	1.29926610894818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120628219-4	8.4441938714526	0	1.29596800969721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109055509-2	2.65091094264191	0	1.50166897623987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34715400-4	8.37192349473528	0	1.29696573469023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145214204-5	20.4194069448864	-1.47614670219697	0.421649186501682	-3.50088829636835	0.000463710164169635	0.0104129224700443	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24267170082924	3.78754248269248
Merged-chr11-119053441-4	6.87479763505764	0	1.30363630076223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14585480-3	6.53284141393491	0	1.30819543907545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81591624-2	5.28633557847584	0	1.36503243138325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94574806-4	10.6474228075047	0	1.31038178497998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32160913-11	40.2942708864596	0.860393206898403	0.333407609908192	2.58060458528623	0.00986274768318785	0.109799266090695	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82273041724378	5.66791112857163
Merged-chr2-11331680-4	7.45059868107686	0	1.29704878293319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103411988-7	31.312163733964	-1.54362096805482	0.376453612537083	-4.10042809166234	4.12386565148736e-05	0.00156855718778867	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.26296034171194	4.49088941427271
Merged-chr2-30657890-4	10.0653448749946	0	1.31203135802313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69455729-9	32.3204122336408	0.551773665973543	0.280885392977619	1.96440854443972	0.0494827327539553	0.367823058262456	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21753285680792	5.76657130935801
Merged-chr3-144232135-4	7.91186630567005	0	1.30025849128701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82974115-4	10.4082092494685	0	1.29037768176981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64197846-4	7.63595468909986	0	1.30135407759979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14165775-4	9.25639752856786	0	1.2865247102607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59076445-4	6.693885849998	0	1.33639170471219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83665974-5	18.7042411074933	-3.38162723588564	0.68143709276591	-4.96249363556044	6.9593847670748e-07	6.03941509945909e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89152098326598	1.47190689055611
Merged-chr17-57338226-4	5.49225070174575	0	1.29628737944588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91789938-2	4.59259936665121	0	1.30603906639213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140766122-1	3.85545570972924	-2.89990002236277	1.17903091271015	-2.4595623330155	0.0139106539075613	0.141700014067576	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73470389234213	0
Merged-chr10-122739291-3	7.01290996958237	0	1.29150382121576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25272133-4	11.0072641101766	0	1.300352197556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124526751-3	5.58458363113568	0	1.32234055807735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107866598-4	7.83266512821323	0	1.29997914524423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21961136-8	32.5066602819892	1.666909305111	0.24956977627634	6.67913130340464	2.40362738468778e-11	1.08322369020557e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50370472403801	6.27604512210182
Merged-chr2-165956540-4	10.5311300556269	0	1.29580280329085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100376780-4	13.842378689405	1.55095251129554	0.41432039297016	3.74336512904215	0.000181572081624835	0.00506402443271722	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4472191155631	5.03036408586643
Merged-chr3-87401563-6	32.557800902336	-0.061646899221522	0.415402632598636	-0.148402764893129	0.882024918165172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53680008247932	3.17272785327624
Merged-chr10-117941576-2	12.6940342776996	0.72192879314606	0.484569550799546	1.48983524027638	0.136267562655559	0.775116656449352	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91468712522904	4.26127523475505
Merged-chr15-12373739-4	6.51219121930804	0	1.32416172843945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59481977-5	14.2784545001997	-1.72204385339901	0.6066301210562	-2.83870482791189	0.00452970370151503	0.0602601828337136	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10519849176701	1.66210910851734
Merged-chr3-9556568-4	14.9346521104233	0.552270602865882	0.371662681377077	1.4859458066105	0.137293456080912	0.778850436762154	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16854104237209	4.74186440555894
Merged-chr17-86658024-7	24.1549173244449	-1.35929899846222	0.465256736073278	-2.92161057126131	0.00348226645214209	0.0495109189690333	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35217096277292	3.34903645826337
Merged-chr5-141084918-7	21.3780699848546	0.686351726154774	0.45074412325789	1.5227080969885	0.12783175132714	0.74153885976761	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85882842783877	3.46870648127072
Merged-chr7-55912016-6	23.9192810458303	-0.453556838105024	0.371368508089008	-1.2213120612702	0.22196788843769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39092800104767	4.02858678969315
Merged-chr4-132178762-3	8.90115168689415	0	1.28555381601682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159974756-3	6.08117274602641	0	1.31964470177884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47250015-3	6.27698305984998	-0.870579027063737	0.979273438227843	-0.889005045045635	0.374000368438076	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38640097695213	0.851599296279844
Merged-chr7-101362131-9	40.8449990247904	0.662545638418832	0.350231669852573	1.89173537246853	0.0585262478967254	0.41651668428005	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09884986159596	4.69495875876639
Merged-chr2-148491344-2	4.24117291631447	0	1.36323193218979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131957901-2	4.67373055955391	0	1.30781011606597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103472867-4	6.2366952047078	0	1.30160896619793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68096746-5	13.5688996307994	0.312939698441949	0.532816953459316	0.587330595263885	0.556981696819005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63843246078049	2.84583565619994
Merged-chr1-181170471-5	12.8866301613599	0	1.29001386099899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96017604-3	9.85008494101855	-2.25773764751808	0.640520798907823	-3.52484673623064	0.000423727870783633	0.00970519503828506	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38882315802679	1.63879159991986
Merged-chr19-32495624-4	8.45565315874192	0	1.2993776711024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71376626-5	14.6602187068538	0	1.28178884761395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16900173-4	13.135882659862	-5.51518860453993	1.00937355319671	-5.46397177444682	4.65597599900965e-08	6.50105571861719e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00654576984639	0.382164212378408
Merged-chr2-152767782-4	7.04289643039665	0	1.2933872481742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66729133-8	26.3856195820785	0.0683648646791477	0.308670051887248	0.221482013759211	0.824717139808562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53642337331086	4.60877787053888
Merged-chr13-97235234-3	3.64059190300689	0	1.32736993131321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46184993-7	25.7033605732521	0.220624871390751	0.427440676977079	0.516153195692654	0.605747416877112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57501258789873	2.94035601549427
Merged-chr7-75551142-2	3.98323434483078	0	1.31866489994904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64461930-2	9.57268140672056	-4.92777079204497	1.05227468524689	-4.68297000881362	2.82747896058191e-06	0.000184539654526382	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33851489843352	0.306240821987646
Merged-chr5-64716795-8	32.9879861609998	0.698993698372885	0.318786488970821	2.19267040027178	0.0283311348396221	0.245102273566856	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80089155553841	4.34697176240821
Merged-chr1-127083982-6	21.9460762117543	0.910337470714949	0.470196667930981	1.93607809838536	0.0528581365050924	0.385843139863915	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75561163392042	4.42057366625618
Merged-chr14-51084002-7	42.8869912899096	-0.81102323309285	0.237961676300952	-3.40820944657972	0.000653906824667776	0.0135739184455073	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1543339271081	5.28510163493459
Merged-chr3-87214702-6	31.7521051161952	-0.371493363416906	0.367749974307794	-1.01017916892084	0.312409457586019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23060759532056	3.7247282154842
Merged-chr13-97573282-4	10.1592586322529	1.56854603313608	0.716624526030153	2.18879758668779	0.0286115552247756	0.247046866770373	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.991019165339114	2.58596880210664
Merged-chr17-13685771-8	46.2713568731786	-0.182900397979966	0.314125138004934	-0.582253299247556	0.560396076972109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39769753879885	4.24810223473754
Merged-chr1-162521952-3	11.1662762710486	-3.24902235535101	0.830290044891561	-3.91311732007499	9.11122403505638e-05	0.0029367010450802	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2282332973973	1.04220233489076
Merged-chr5-88631695-4	7.2805660104923	0	1.31199543677179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24313759-1	3.105843174998	-0.573786437355591	1.31276476422446	-0.437082448426748	0.662051555606491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01448616222532	1.62319166842064
Merged-chr12-91803782-1	2.26223277240081	0	1.61123817456673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61772211-1	1.94869337633704	0	1.4046700853345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50888119-1	2.82468552466764	0	1.38304619308976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35266855-3	15.5362608962304	-2.40854273404055	0.36949219909416	-6.51852120273522	7.10039022440303e-11	2.60664100901034e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88589907712043	3.56126212538144
Merged-chr14-120360415-1	1.76565940869945	0	1.4347399031885	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120020417-1	2.97933772351551	0	1.35534899716787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65497626-1	2.06522016986274	0	1.41304241040805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-19314710-1	5.29236349671033	3.02805440822484	0.992264749172652	3.05165976192303	0.00227579902801691	0.0357916638471223	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06630003782976	3.38238325143439
Merged-chr1-157499382-1	2.8044733933069	-3.53207327067138	1.21653808569224	-2.90338075906726	0.00369157517827042	0.0517158310905346	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42777906642394	0.306240821987646
Merged-chr8-43368400-1	3.68370306211295	-1.04320486049574	0.902029374089702	-1.15650874623514	0.247473124157351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89945428925012	2.21567513147444
Merged-chr18-74913889-2	4.78892550073035	0	1.35304414308034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13200586-5	26.2558531350767	-2.04284184596127	0.354658753409835	-5.76002093934112	8.41035020484028e-09	1.53087115455569e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52460326697401	4.45011520637762
Merged-chr1-78910463-2	8.36104743351297	-1.00599153221113	0.668376842128895	-1.50512625333768	0.132291620532527	0.759913356909941	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4230187977041	2.18210741161866
Merged-chr7-55850960-4	6.73552968746094	0	1.30606824126651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5392594-3	6.21457025733284	0	1.29980482919266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3852800-1	3.75529222288147	0	1.30640485231873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123050898-4	9.71690725728594	0	1.28534701128053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22444537-1	2.54587119660546	0	1.40349301935222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26695677-1	4.63780079804651	0.442609452897526	0.855534476275287	0.517348470659535	0.604912923816342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72652975460738	1.74374772464511
Merged-chr10-99461321-3	5.28892927684675	0	1.33019051909467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28709203-2	4.45986950417399	0	1.32196480504155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3487434-1	1.57881326276795	0	2.18676611035073	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12136804-2	6.19688676639463	0	1.33981237471519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27385354-3	3.60997694430503	0	1.35471438162602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4086029-1	2.10136858187451	0	1.38636109160919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39250379-2	3.24738087393102	0	1.37711386379707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96437156-1	1.72521404779004	0	1.44647770489672	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24633343-4	6.72935093117207	0	1.32671576098586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25516251-4	9.84746767516049	1.93717053099774	1.071132744594	1.80852517185626	0.0705248027512999	0.478309679355105	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.207189364431
Merged-chr12-110705964-3	5.73803076293229	0	1.29921161914975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72296874-11	48.5069818255955	-0.276569509126089	0.291201411918574	-0.949753324696873	0.342237607492579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01150069139481	5.60819315695851
Merged-chr9-47625865-11	35.639180209183	-0.842869570088051	0.348029454837346	-2.42183400965867	0.0154424024447347	0.153218832395025	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75701244068161	4.63550017703278
Merged-chr5-65120087-3	7.6882647037923	0	1.29507421677605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21252496-3	11.7803700027853	-1.63635297297573	0.559222695060331	-2.92612046583551	0.00343218006207799	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57709302865602	2.05842035625806
Merged-chr12-25339842-8	29.7807050011315	-1.14038958094974	0.412588204520395	-2.76398978074364	0.00570993275451268	0.0719712550461995	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46502357360627	4.26996436434636
Merged-chr1-52734413-4	10.6487485590889	-3.99418568140126	1.01858510755719	-3.92130775500958	8.80696964018348e-05	0.00285965180689971	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62127117430004	0.306240821987646
Merged-chrX-36870612-4	9.51807128340451	0	1.2956540743669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79524855-3	5.61557534022501	3.42730356571352	1.12489134904309	3.04678631285502	0.00231302078613272	0.0362810024701461	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41959898789419
Merged-chr9-45261611-4	10.0691087635935	0	1.2943031133504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34157148-6	20.9948548754071	1.63447175468221	0.373345879061927	4.37790222511361	1.19827081442806e-05	0.000583909057715256	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60691588153784	5.24546940723055
Merged-chr13-81108671-4	11.9436020975806	0	1.28736606542108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90777777-4	6.98934628257807	0	1.30249854574932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36136536-4	6.68936751277536	0	1.30532236142948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79408903-6	25.4602796000909	-0.524287010859808	0.364803114628435	-1.43717800050532	0.150667422326676	0.831546738121533	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15259686752989	3.68564129988488
Merged-chr3-100176171-7	27.3597243767538	1.79862718939971	0.357555043223304	5.03035049704616	4.89584015599269e-07	4.58232192629703e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01007694695181	4.83840103539316
Merged-chr7-127750704-4	5.91993849483589	0	1.30159187601161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52172561-6	28.4032391962578	-1.20015108292806	0.428150799503829	-2.80310368290537	0.00506133951393652	0.0657923795260982	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5261747212573	3.5390109627999
Merged-chr6-21958280-4	5.63711494198467	0	1.31696634150984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17837890-4	8.0545034093401	0	1.2929671127163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-39053509-2	6.15150668000806	-0.210320895920432	0.76200682949794	-0.276009200677381	0.782540999512804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25613547777022	3.5295541273278
Merged-chr2-120424450-1	5.43179987247946	2.04706392903242	0.927032529641432	2.20818996483781	0.0272310336495676	0.23782934039891	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	1.96275318189595
Merged-chr6-137405903-4	7.19185528965763	0	1.30117491031322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66823167-3	5.42214468652998	0	1.30969725607139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47216906-3	12.8026801653377	0.870720655072636	0.48892885325725	1.78087394366662	0.074933046171218	0.500774681438373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99814221258053	4.95048727893199
Merged-chr13-9449170-4	5.94807005123813	0	1.35736936112124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74808521-4	9.75651279410108	0	1.29695448587365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18036044-4	8.30894528034152	0	1.31327565816199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80376345-4	7.19580974351116	0	1.29744459783903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30135308-1	3.47365162937243	0	1.34652287349576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59593725-4	9.7057617364586	0	1.29469277567774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95048321-2	5.84080584048498	0	1.37333733715857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151493510-1	5.23760975544716	-1.576142008567	0.598926505222429	-2.63161171666906	0.00849809227523821	0.0976981593627228	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3604121902718	2.98030565572904
Merged-chr13-20232284-3	8.02867943694332	0	1.3102378095551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185350554-3	7.64227721397705	-0.909549894278413	0.600989841746571	-1.51341974705449	0.130173072141365	0.750709520090868	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25055570655159	3.47248798210547
Merged-chr6-30035246-4	10.4243641553691	0.340387724438438	0.537453380792102	0.633334418581147	0.526515281531961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35218041350148	2.48868985467357
Merged-chr1-36123892-4	6.01702584898924	0	1.31268734231315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126815078-4	9.46406162253846	0	1.29211047121418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17333999-8	22.3852330604101	-0.149892672741571	0.375532382985509	-0.399147129602814	0.689784797267128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45730837894725	4.27991907589094
Merged-chr1-155108051-3	4.95899792937522	0	1.3641562418781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11138430-1	3.28567299707865	0	1.35083100803789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27435077-4	9.60012818949394	0	1.29122623454659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37504454-3	5.30477640235767	0	1.33710744505393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-76352123-4	6.54216706526074	0	1.30804392071872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139467926-2	6.40967291940086	0	1.36718561115931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-90602000-2	5.09254557695265	0	1.34019110991903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139037316-4	7.07517921144667	0	1.31912003044215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65854240-5	13.4988457714086	1.12421966537451	0.552963312653955	2.03308183318493	0.0420442560674187	0.327386076856714	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28432811329666	3.81548509274515
Merged-chr4-136147720-7	58.8375159548676	1.55069123268863	0.385334401304372	4.02427405245803	5.7151334212752e-05	0.00202967993775353	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47444911687619	4.47420239334898
Merged-chr14-64658530-3	6.7192264968408	0	1.29340583668831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106561036-3	4.57541581671287	0	1.35134643225407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5359466-6	16.6747307997086	-0.660104539357468	0.375929574317213	-1.75592606821741	0.0791010331753269	0.521061481520508	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01841865173984	4.37541521119404
Merged-chr2-122743039-6	18.1528087546524	-1.42437836788245	0.565706256590387	-2.51787628524285	0.0118064782599101	0.125836915408919	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89552002315219	2.32843128278891
Merged-chr2-131206984-4	6.75108446042194	0	1.32831361149963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71166992-4	6.18793163433169	0	1.32872360512103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90275318-20	124.947325234961	0.519184685624867	0.208702069550394	2.48768345586292	0.0128578118981154	0.133961507699976	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5615347657243	6.10276523431244
Merged-chr1-152548195-4	6.07131204712457	0	1.3054870652178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105204362-10	37.0092098117712	-0.705419941710475	0.297446876622511	-2.37158295195589	0.017712070333751	0.170550437170752	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46668951153754	4.589610945581
Merged-chr4-57027270-7	69.2642370755492	-1.7342057147551	0.259461964947844	-6.68385331585574	2.32739773047684e-11	1.0561536951093e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.64577518617066	5.77669334527933
Merged-chr1-34479306-2	4.75682479537142	0	1.33648349437034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37223911-4	5.76435162743538	0	1.33307174720408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52619403-2	3.86277610032136	0	1.37324917385519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64486982-2	3.29722619927009	2.24650011081984	1.41641855114961	1.58604256418169	0.112729654422975	0.678496085283569	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr12-73612905-2	8.72426456306777	0.750037034049298	0.638654107223788	1.17440258438122	0.240233810601395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42178979653167	3.64685074399206
Merged-chr18-56523765-1	4.07114817228448	0.803638671477258	1.30717914699731	0.614788472814364	0.538694422863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.469435083901436
Merged-chr19-55552934-1	4.14370323735651	0	1.33645388965581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43094769-1	3.88494428006258	0	1.33584620351019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46964136-2	3.25648620848444	0	1.39274355324025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91785861-4	5.1769236822599	-0.418529463248707	1.31073428664466	-0.319309159387367	0.749492087764596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr16-21687601-4	7.13473422490329	0	1.30573935197703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168473142-1	5.33831048743949	1.31593763506031	1.07144806549024	1.22818611320952	0.219377110473816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0.773587911294612
Merged-chr8-79496504-4	8.47587650007574	0	1.29651612318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114812866-3	6.70506603470158	0	1.30309922821797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65691584-3	14.1778668087962	2.40269245314363	0.534960107632933	4.49134882930795	7.07735258687111e-06	0.000384116845632624	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35484619196312	4.54470949157123
Merged-chr11-97826680-5	15.8288962415963	-0.546218803017947	0.55991947778291	-0.975530990957463	0.329296936742124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62602212732302	2.11480110409737
Merged-chr3-38116218-4	7.62929605309706	0	1.30477402396836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56631540-3	7.05158842676487	0	1.30545861730124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86038357-3	6.65294504357254	0	1.2956465990654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103469483-7	45.0527561437856	0	1.27623879342777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131146507-4	10.4505474003604	0	1.28663997533822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61139098-4	13.2528360847835	0	1.29822999931635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85507942-6	17.9473808636405	-1.19395793529137	0.505089400307712	-2.36385466526121	0.0180859060371136	0.173315252706498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92012582471985	2.77979544312931
Merged-chr17-34047553-4	12.0757257642862	0.95553326548948	0.50754193419291	1.88266860551919	0.0597452925644355	0.422431929010561	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8033692718607	4.1749151188847
Merged-chr7-27526658-4	7.77949646799598	0	1.29845381050942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60763067-8	54.18138509771	1.55646705628149	0.336317993779712	4.62796247916777	3.69280898718508e-06	0.000228081565289789	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41410858887094	4.92371961989486
Merged-chr12-76191153-4	5.36598102191011	0	1.30019623562048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118540465-9	51.7311965288199	0.167004358920224	0.318885166697539	0.523713161856244	0.600478059743886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00790529569581	4.17687184890867
Merged-chr5-105684098-4	17.2051775618486	0	1.29786365231395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90243096-4	9.86520135285011	0	1.30173335816064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30900461-3	12.180044711642	3.30491847205325	0.792031632625968	4.17271019983866	3.00997691258753e-05	0.00121714078793283	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794807375335281	2.96134329274887
Merged-chr12-85516035-3	4.83560989780503	0	1.35681266401937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68059585-3	6.76932476907871	0	1.30346468353195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95036359-3	11.0174202162352	0	1.3001906724628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89178146-1	3.02022195329485	0	1.35626104830835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107057285-6	21.9485654324087	3.36262399736114	0.569831928811594	5.90108034903206	3.61128968760079e-09	7.53940370370483e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47738935185674	4.47914355279836
Merged-chr1-171663971-3	9.77658045930993	-5.03349375423941	0.978814524923514	-5.14243876247416	2.71194852014165e-07	2.82189471333084e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07564722001806	0.469435083901436
Merged-chr10-7936723-4	6.86582532043435	0	1.30393169150518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120623139-1	3.24742046960124	0	1.37536369406564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78213284-4	9.83243398594807	0	1.29837648959883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118748484-3	7.1223389118131	-1.05168329206788	0.756073593900213	-1.39098005875693	0.164231473811586	0.883063431884467	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36846187307988	1.52860153008918
Merged-chr1-89902393-4	8.23001161321451	0	1.29371007972416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14386056-1	5.53904919351573	-4.98526823324945	1.02703413250867	-4.85404338127719	1.20969255306374e-06	9.38819116062983e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39602030127763	0.306240821987646
Merged-chr12-40575193-2	3.49574810121899	0	1.3670675707512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103233103-4	6.09115171429641	0	1.30663032639052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57776814-4	8.40365339448953	0	1.29716044342376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46315509-4	6.87272458485975	0	1.3219428624379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52289256-2	4.30496168861841	0	1.33822437905425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8934079-4	9.75606612932902	0	1.29957114280945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97087487-2	4.97811773665534	0	1.32243460435178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26950000-2	5.41740407717408	0	1.32002134388724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92499717-6	36.9323967011655	1.94238497547593	0.390319906058303	4.97639230110337	6.47802924233497e-07	5.69735260928157e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57857521410188	4.54209946908129
Merged-chr5-66079932-4	8.07209033827534	0	1.29301686828793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50163107-5	13.1475179089632	1.66116691046598	0.674163866785532	2.46404026128924	0.0137380678767383	0.14061995951445	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.790492323028544	2.31205403547308
Merged-chr1-171843119-6	16.102522879359	0.718131439477258	0.374473596903155	1.91770914001976	0.0551479021463575	0.398323867615579	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5736316975271	4.34730386992927
Merged-chr16-33963856-4	7.81888776803912	0	1.30023203588139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119396758-5	23.5510700293152	-1.01575479688162	0.523382635099114	-1.94074990028903	0.052288620514138	0.382840582197968	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24989931064193	3.77291256438237
Merged-chr5-62893263-6	40.8215949157768	-3.25334515132415	0.460418747671126	-7.06605707908313	1.59397872476353e-12	9.92001273794264e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11012317874878	2.96006934525357
Merged-chr14-30580058-4	27.5387849169438	0.85898970582261	0.411727391214127	2.08630692092059	0.0369508301601453	0.298060603338459	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40773565872319	4.02689501421254
Merged-chr5-64209994-1	3.08960941261368	0	1.41124249615763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70981241-6	42.9139653757171	-2.0590631194765	0.296125955047805	-6.95333551273509	3.56748861819738e-12	1.97560263766717e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.86114458615396	4.66156048137521
Merged-chr2-129355717-2	7.03526842302388	0.763799641839483	0.799407152196529	0.955457603476267	0.339346335638971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56002733185513	4.15332090608726
Merged-chr14-70168138-4	6.20732919709895	0	1.29312913509272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118678578-4	9.63604389959365	0	1.29612624816187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8350896-2	5.46869858273075	0	1.34368964665154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79621608-4	11.9231082771594	0.241976537862903	0.447110505076934	0.541200743698174	0.588369224950707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58794858154621	3.8300241714585
Merged-chr9-116134872-9	35.7602657988455	-1.43261603713427	0.323731518402534	-4.42532146453818	9.62987720846275e-06	0.000490470737384417	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9426567421928	4.46561179454582
Merged-chr19-21445283-2	6.40197509855776	-3.94685887563099	0.968228915580543	-4.07636955694974	4.57442977632692e-05	0.00170034521139851	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05158712590898	0.729295484888209
Merged-chr9-57638076-2	6.67652399899459	0	1.31396252492162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36574015-4	12.335489101443	0	1.29834210880704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82793723-5	18.283551141233	-2.10191753976147	0.570984891414803	-3.68121393642007	0.000232126128015995	0.00612127278504164	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.490356952136	2.16448544747254
Merged-chr12-73658638-2	5.18736847433425	0	1.30125999034772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107577599-5	17.116134236414	0	1.28801947263141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-54507793-4	7.72665690016677	0	1.29844866810781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21411535-6	62.8462901261968	1.78526776143395	0.391294503575526	4.56246572625155	5.05563485095078e-06	0.000291486789341473	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33958993331945	4.48517690684869
Merged-chr14-27341309-9	27.6244273506341	-1.93457233282155	0.698714210911354	-2.76876053558183	0.00562699760120519	0.0712474854978883	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0450587064627	1.20440436174322
Merged-chr10-13837147-8	28.1358830669289	-0.0746925913900985	0.311054724437049	-0.240126850750389	0.810231919184597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5165529150346	5.26498625306689
Merged-chr13-46521708-2	4.03314168096684	-0.616853229513974	0.817262765746436	-0.754779558506596	0.450381261001905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08275504062332	1.46894927517136
Merged-chr7-122257282-1	3.26099586204017	0	1.34796200285632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66680344-1	2.62661187490083	0	1.43459240787046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37847761-4	8.46561385983784	0	1.29801839268499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130657923-4	12.0918329124053	0	1.30309361305739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8355773-1	2.52355330153475	0	1.37076249125971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91188130-1	4.00993257931156	0	1.32247153306743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126890818-3	10.7795944814235	0	1.30482400991691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182368526-1	2.45325338624507	0	1.39568671443208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87542801-2	3.44986397502152	0	1.36645796889228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94585991-1	5.38019636882856	0.22862749559146	0.76586700034207	0.298521147261006	0.76530543830799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19511255923655	2.16404752080749
Merged-chr11-118173213-2	6.25054878285272	0	1.29899275680534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165407960-6	19.4596393420096	-1.13009929011651	0.521747658686491	-2.16598823454532	0.0303120860135252	0.258644194349459	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78558158147285	2.30730561679788
Merged-chr1-151104965-1	2.6677873022637	0	1.45317568160518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106762238-2	3.87011972911125	0	1.36885783394186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29382240-1	3.07198990289451	-0.348681082299073	1.24459789987839	-0.280155608757771	0.779358122492489	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961036207701452	0.890396206374751
Merged-chr17-80800570-2	3.53711956363054	0	1.4361261905792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116971832-2	6.66656537402767	0	1.30652245698253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62330086-2	3.86892742100666	0	1.32827585520525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39637612-1	4.81437898794538	-1.13790773719487	0.914554418246834	-1.24422091730331	0.213418267347214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10094650473153	1.04220233489076
Merged-chr12-76596451-1	3.56428596508596	0	1.3278785407289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43381498-4	10.7852706601781	0	1.30640552107048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96632980-3	6.98928779668226	0	1.33978603042048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145807473-2	5.38064074820933	0	1.32791841338229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119966290-6	46.2192911429208	-0.100838429961806	0.310631998595807	-0.324623446449949	0.745466079788222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3529191322426	4.22500545947468
Merged-chr8-115618370-7	21.0385804271605	0	1.28022448981531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65112964-6	15.3568269439268	0	1.28374166136061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21148540-7	21.3814388403936	0.232701852564593	0.386586576854001	0.601939815030037	0.547214200163267	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89230542177383	4.35249975200466
Merged-chr13-47224068-8	32.5312014201612	0.291081327126168	0.44015801822692	0.661310972588265	0.508412906134442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35525454415027	4.64193270832665
Merged-chr18-82821631-4	6.22111769011383	0	1.30782399568058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86493616-4	7.46788038976287	0	1.29834482022907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-139062323-8	19.4582115129143	1.2619060904509	0.496973633785715	2.5391811650817	0.0111112269932931	0.120210966739028	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57121210721439	4.21091301806504
Merged-chr13-24599788-4	8.42833543207658	0	1.28350647398828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103336679-7	23.6708262429901	-0.730720723609424	0.364751579489489	-2.0033380654092	0.0451410143420281	0.344385947637499	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92667224583802	4.23773830943643
Merged-chr1-160280779-6	22.3616445290654	-1.33910687051399	0.413451342711701	-3.23884997381119	0.00120012682959387	0.021838899417054	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14425849220641	3.53506492140294
Merged-chr1-149826345-3	7.671050726615	0	1.30188483019908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16538174-3	9.81621589550029	0	1.2970825565576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43384836-3	5.82258386503733	0	1.32041522302476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144337422-4	6.83659537394528	0	1.29147862614899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134319747-4	11.6961946289033	-0.315668869914314	0.580134265961381	-0.544130709795597	0.586351529081376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1894515275762	3.54335784812668
Merged-chr5-125352080-4	8.26905698906779	0	1.29782354481395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21425931-7	26.6835148007063	-0.870403260202531	0.349859330337319	-2.48786636435658	0.0128512012437448	0.133944485654649	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73236213428112	3.78755528605218
Merged-chr3-122943605-2	4.54380562419117	0	1.4035728877747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80373110-4	7.97319205853032	0	1.30183030257565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29437502-8	79.3546417255239	1.00606434722302	0.328768862282577	3.06009620326606	0.00221265905159074	0.0349923568212121	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9321976778643	4.89048791322159
Merged-chr3-144110905-4	7.5400053640325	0	1.31438991676618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118486055-5	19.7924246407353	-0.56250578550284	0.456042114302675	-1.23345140253758	0.217407397306192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69917235118147	4.15327122023552
Merged-chr4-3780575-6	14.6093318688218	0.54336008228409	0.531996587523733	1.02136008956984	0.307083866778238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24746481891778	3.81110452458127
Merged-chr2-128751101-8	22.9470314586016	-0.456588542740052	0.334565959349326	-1.36471906355338	0.172341365583306	0.915892881864568	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52971719061291	4.03554356471794
Merged-chr3-109335684-2	6.16023128598868	0	1.31784378271701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100511809-6	24.1267305838842	0.521239104460909	0.410944734434708	1.26839222110467	0.204657918183325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08116978120432	4.08585466505258
Merged-chr12-51707012-3	6.22547001612981	0	1.33350931153837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12172267-6	21.7925237893489	-1.0725173287622	0.558361202175183	-1.92083068197439	0.0547530570147214	0.395959856538733	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27788954355324	3.41384835242074
Merged-chr7-145106642-6	20.8908057035142	-2.42779630539803	0.487080911961577	-4.98437989618765	6.21608426892114e-07	5.52647949165879e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93165027291077	2.27643187026249
Merged-chr10-17215184-5	14.034323174811	-2.29514518963813	0.711440388770451	-3.22605410919209	0.00125509626596926	0.0226687453278129	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78333632791442	1.46928333126936
Merged-chr16-30969456-7	29.3149847708921	-1.62371070567111	0.386845874424865	-4.19730650633184	2.70108260274863e-05	0.0011185357652675	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60658347208048	3.6697741097763
Merged-chr2-131222738-4	9.09624375125593	0	1.30520168290034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63050997-4	9.02249941610212	0	1.31135831789265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60837545-4	13.1747075557325	0	1.30453748966703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96660953-4	12.0827491986061	0	1.29860538518932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82816716-1	3.97370757919817	-3.12293498738427	0.971551459967479	-3.21437938808594	0.00130726822142511	0.0233592423290252	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80445737638559	0.733321818366247
Merged-chr5-149286146-2	4.36403888016957	0	1.32677920792273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145289179-4	12.3761495443487	-1.11153297568896	0.576277160159724	-1.92881663986281	0.0537536293430359	0.390779438594573	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30299361844032	3.51727611280032
Merged-chr9-116083754-4	15.4412237055345	0.811240317189627	0.523592394582926	1.54937376016669	0.121291897801349	0.715533138921296	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93369669209772	3.35173293385949
Merged-chr3-135628607-8	21.9554856382757	0.231071897339864	0.435701331060809	0.530344712918985	0.595872950941424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50859793373472	4.30337819437485
Merged-chr18-70420500-8	27.3314738152519	0.148993562262807	0.302934338347941	0.491834511318021	0.622836337249756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93734536651247	5.07993938961894
Merged-chrX-98963915-4	7.67402190401999	0	1.29705046502351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91723588-4	5.19067786893862	0	1.31042785648481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23555981-4	6.56128539479855	0	1.29685683128131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152172623-4	11.2019502322588	0	1.30750553926786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35678010-1	12.6622949052019	0.857737758087019	0.46052629239077	1.86251636933512	0.0625303402853597	0.437063602127191	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7133459530312	4.73995477947769
Merged-chr5-98320004-1	3.73437583989863	0	1.45687773722109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122732712-3	9.15780700316462	1.77655689658648	1.01357153972081	1.75276912084157	0.0796416455846628	0.523515035949641	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	1.23021119707292
Merged-chr2-31726934-4	6.92139272728424	0	1.2937209259765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54998795-3	4.00308911024461	0	1.37627833526503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46076684-4	15.092150906054	0	1.28905547137094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14640230-1	4.23198946637787	-1.416547758391	0.995547771227801	-1.42288275794539	0.154770145312085	0.848457207681504	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67409343122923	2.04937768295532
Merged-chr4-84077459-2	2.71223155004783	0	1.43431043392636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35127958-4	10.1553152217445	2.77475284803141	1.14092356311127	2.43202343938337	0.0150147356203232	0.149680078389877	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr19-5622117-7	20.4676904272765	-0.303814776443226	0.437253445007629	-0.694825346517111	0.487164761730704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26062281272809	3.43728330824006
Merged-chr1-92251085-4	12.9873356839094	2.86708367483642	1.06456545024741	2.69319624657186	0.00707705992062268	0.0846836765378153	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.958904680953568
Merged-chr2-163516665-3	7.06733675744732	0	1.32641328006491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122870551-8	23.4765958837772	0.387982189503565	0.362079561342165	1.07153849851503	0.283927369921298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76415533154542	4.1615912614963
Merged-chr4-149076065-5	16.8647026770261	0.222282650250028	0.498962141051965	0.445490012090672	0.655965676153699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26568697086731	3.36192922285494
Merged-chr5-143602290-9	40.0811132596718	1.22486156516177	0.260898704346931	4.69477825973796	2.6689607757763e-06	0.000176345713704629	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6880098736045	5.84065945115597
Merged-chr4-142095748-4	8.23823994830786	0	1.29437002077916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146010939-8	29.6433396247782	-0.83438481548576	0.377338475328478	-2.21123704588941	0.027019426255988	0.236285334234549	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78718861093061	3.93608534958301
Merged-chr5-122689783-4	12.3047654911328	-5.46577895405811	1.00711391478782	-5.42717052540141	5.72544221809606e-08	7.76213168430924e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94633336459861	0.420961122473315
Merged-chr14-121437350-6	17.1421004835875	-0.875895145644587	0.550733822655384	-1.59041466060941	0.111741367857089	0.674544362839724	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01509655680445	2.61564587584303
Merged-chr2-84252264-8	21.439458817309	-0.135575291854321	0.358814370953144	-0.377842424466397	0.705547655699136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64345033794943	4.55235099185437
Merged-chr15-58797452-4	6.99738951213735	0	1.31563586770652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73210596-7	20.9819773062276	-0.197395144870184	0.448238441227561	-0.440379777177502	0.659662069181109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64650475863919	3.42684806903154
Merged-chr17-79442718-4	24.0162409878618	0.481825965610672	0.613358744419237	0.785553267145302	0.432129252087167	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93251770762053	2.42441375874834
Merged-chr11-94118847-3	6.55973823316815	0	1.30267541020553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50403962-2	6.39428768228907	-2.80060470212722	1.01795448837923	-2.75120816706286	0.00593758985199451	0.0742295286911103	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86935974489936	0.469435083901436
Merged-chr7-115155034-1	5.04293642687213	2.71681402400097	1.0072880262515	2.69715707245251	0.00699342744013855	0.0840987319660092	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	2.17540470129796
Merged-chr6-129427473-2	2.55220142742538	0	1.45210297034799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65516658-2	2.60905018912567	0	1.99060260643553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92679021-2	6.25699329718287	0	1.29500706606048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135598621-2	5.40061868631193	0	1.31265814555485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-10108724-3	6.85113867347001	0	1.31261668850454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76889680-4	14.6112448483774	0	1.2908256126477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-108099067-3	6.2673486773158	0	1.32165461178828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96856171-3	10.0763605816688	0	1.32094005318621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43711307-6	17.804405124694	-0.484502977411947	0.502574055787225	-0.964042954133451	0.335024391016278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22510923832019	2.59548068020203
Merged-chr5-121564568-4	9.95751855770056	2.84136161089389	1.11937243427428	2.53835231589925	0.0111375799040337	0.120336689221063	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.17347279658369
Merged-chr2-30128994-3	6.64903097650081	0	1.35184417137801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94473620-3	5.37686154684996	0	1.30456261464361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75781283-6	22.0730803906204	1.03476092776696	0.346576788846443	2.9856613629871	0.00282965803460081	0.0425073181446034	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35071658794249	5.40887966320321
Merged-chr7-71875498-4	15.129807508178	-1.12919150338635	0.551168819634002	-2.04872166777536	0.0404893391915057	0.318911043221477	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16633325108981	4.27478407599645
Merged-chr8-14627109-8	22.6193933898226	0.423042425341776	0.364901661061271	1.159332692845	0.246320600551688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15941614318575	4.39989705271001
Merged-chrX-85330038-3	7.92380991622025	1.36995638583515	0.773599792011584	1.77088515273882	0.0765798018110415	0.50886554089326	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06185925214012	1.73249259224818
Merged-chr5-123139160-3	6.64479800865519	0	1.29204173313374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97740384-4	8.83807185432712	1.95893389600043	1.27805673087709	1.53274408613777	0.125338922134517	0.732200715698384	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr3-87337258-8	32.6586901315737	-0.550283959612272	0.376980734979038	-1.45971374278017	0.144368763326101	0.80576710012875	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11260660111595	4.54374939521368
Merged-chr8-14859686-5	11.1805596395809	0	1.28285182071474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80159289-3	8.22904097303106	0	1.29579982497908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86961999-2	5.18809219789911	0	1.3000265237461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8511255-5	27.1692864136438	1.89832888243488	0.798980568559971	2.37593873635287	0.0175043688185825	0.168907336801402	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.804694039803978	2.41272900099005
Merged-chr3-129422024-4	6.47805027263347	0	1.30313122424705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43470527-6	24.8858048511141	-1.6939163066225	0.529932130819881	-3.19647782821127	0.00139116517786377	0.0244636920647702	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81587287065035	1.96739710961373
Merged-chr6-120189438-4	8.96048305818606	0	1.29327872590232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98027595-4	9.18960405931879	0	1.29760623321513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58132034-4	16.9089007272236	-1.32562151927813	0.345434930803858	-3.83754334338247	0.000124271304973656	0.00376303646654705	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65766152150019	4.3535296361535
Merged-chr15-80074980-9	48.7753792812511	0.326397560191055	0.255391330812258	1.27802912946561	0.201239155536257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95024197285397	5.25229299583304
Merged-chr6-146756939-5	20.7856863157527	-2.36693061867064	0.453328275949995	-5.22122873035109	1.77739844998729e-07	2.00597373251933e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67515325594993	2.86134483245017
Merged-chr5-114651528-2	8.78353955109768	-1.61283791401814	0.759893482145971	-2.12245262252207	0.0337997472095462	0.280354563011914	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90976921185393	1.04885222765555
Merged-chr10-11323759-2	4.62477208461279	0	1.32769926719263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86712809-3	4.66855460014317	0	1.31356573290946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67555409-1	5.27090550163668	0.48284920389428	0.595887645328356	0.810302424760313	0.417766382093731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10409890659446	3.57425437479614
Merged-chr10-117033950-3	3.53804729355357	0	1.33647356711686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16568907-1	5.39490346187516	0.091236772024356	0.852123756504435	0.107069860836442	0.914733557257231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3134024976227	1.47190689055611
Merged-chr1-92799869-3	4.81095353143325	0	1.32890564045986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110266042-3	5.57060838676884	0	1.34262462626993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17402949-1	3.41240171105207	0	1.38427547870908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68180936-1	5.67903930180161	0.668931491772914	0.905972649443682	0.738357269597129	0.460297373576306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49249975319477	2.68011542396584
Merged-chr5-120515476-3	9.43519147622742	0	1.29346033325368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22058416-1	2.44688691735233	0	1.36325450387539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94301252-7	15.3646705861109	0	1.30384939062659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145951437-4	16.1270357074867	-1.90049040169603	0.526537060572056	-3.60941431099122	0.000306889125715079	0.00761061738481121	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.599764802926	2.41685582892305
Merged-chr2-167996542-4	7.06246570335799	0	1.30023959503637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23920040-3	10.6178346746473	0.455509439063453	0.476535423053405	0.955877395524497	0.339134180471852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03698355738039	4.68192670461942
Merged-chr16-65582895-3	7.85161267182133	0	1.30658690028662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91305229-2	3.13640657090322	0	1.33798212103644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-14639583-4	7.2218533338373	0	1.31960852130471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15380733-2	4.74502279584849	0	1.3072146185296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64338105-4	7.63899774765045	0	1.28920287245275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114659624-4	9.65149928782318	0	1.29103446905522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67129374-2	4.25642277932418	0	1.31367095662992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69247502-4	6.3594666098883	0	1.29871007423003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12265246-3	10.1854727707084	-1.77176599014904	0.855226565430983	-2.07169194897047	0.0382941786479055	0.306250324063888	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63848875702262	1.0023426291647
Merged-chr2-5507764-3	5.57658194853323	0	1.30943228409156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33894677-3	5.62129670849214	0	1.30858466481397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150598967-3	6.68561512026321	0	1.29687629393505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37349219-3	9.20645942469464	-1.55008736608475	0.643345483340983	-2.4094167227769	0.0159780420947778	0.157173135439613	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66677955024263	2.15292080626044
Merged-chr16-92853806-3	4.34133251009133	0	1.34006406746112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80334349-3	9.91005626028583	0	1.29228323081466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40829147-4	8.22318882888679	0	1.2955176402195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165487026-4	10.7828459753815	0	1.31793504150192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12540173-4	7.8306516359005	0	1.30221940658206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4366141-1	3.43048201396767	0	1.33562479197975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132355983-3	6.5249073680951	0	1.30283763901236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111436649-7	19.1076927931045	0	1.27723877377576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121471702-10	45.5344894152586	1.40200249196952	0.257999034999218	5.43413851130791	5.50617985914156e-08	7.54312010640387e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89349781621843	6.23193908057554
Merged-chr1-180392291-4	8.05561469879363	0	1.29788714303015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107620335-4	5.53645520957955	0	1.33375826397197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79798410-4	7.07733218959073	0	1.30568874454586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113220754-8	35.6413036321243	-1.36776510206097	0.300247800147372	-4.55545419946333	5.22725047599024e-06	0.000299957511706279	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.37597399277269	5.03697218541024
Merged-chr1-191878187-6	33.0602853935779	-0.575558843208081	0.383722816684684	-1.49993385376673	0.133631537589946	0.7645302401087	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02557512598723	3.15560894171928
Merged-chr1-156533636-7	23.2034599415984	0.902851036491632	0.378292689660186	2.38664679801941	0.0170028177152292	0.165067022198687	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77907536570881	4.00744981258532
Merged-chr6-13672903-2	4.45577084774529	2.45752338528388	1.23807166515937	1.98496052727896	0.0471488633245834	0.35555748116228	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr6-134522302-2	6.87614978137714	-2.50177183147775	0.728565636761705	-3.43383177196979	0.000595113416932849	0.0125892785182564	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20083111067344	1.9094343094868
Merged-chr12-92928363-3	7.11627502004813	0	1.29630355047387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37678132-4	6.72932934679103	0	1.29820857868578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154915562-7	22.0022757211575	0.487045305488939	0.504733114327503	0.964956115744196	0.334566792661795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78281671063386	4.06376574244281
Merged-chr8-125596387-6	23.9128608678733	-1.34603923966515	0.399871817698213	-3.36617680989216	0.000762178376550676	0.0153577885273144	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94923117837801	3.57117019830609
Merged-chr5-105056672-3	4.24992504597324	0	1.38072235800797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133343772-1	2.7230403992812	-0.608973065206535	1.96270472253001	-0.310272379852198	0.756353833106538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05552087422678	0.666688015277142
Merged-chr7-73617922-1	4.64732632495029	0	1.3121459634342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49220793-3	4.44977549959502	0	1.31406445990183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80325257-1	2.41998695778371	0	1.40543382454029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96418530-1	1.4782196423138	0	1.46133719455573	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43409333-2	5.60091752499356	0	1.32923842645704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17710991-1	7.34395698077373	0.326198749914894	0.650477004274288	0.501476220944692	0.616036008931752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80794184436946	3.21361753033067
Merged-chr9-47688828-4	10.4533528042528	-0.455707633160777	0.500313066518034	-0.910844956203738	0.362377071415523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5580931895749	2.62798987719808
Merged-chr2-146214969-2	8.32812850705586	0.453049027786746	0.705879624160909	0.641821937168527	0.520988804309008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17050835418883	2.92167370040339
Merged-chr6-89338864-4	14.2433000703671	0	1.29431929783084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34276853-3	10.9051134712678	0	1.29332226398969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91899737-3	7.97366695746176	0.598877777210222	0.723306572143916	0.82797225999913	0.407686209991023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05719968437344	2.16828781307614
Merged-chr12-79755247-2	4.64013957515078	0	1.30307985435921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83220795-1	1.89877971428583	-0.838056517917263	1.27225164079934	-0.658719148823986	0.510076134202256	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69470474459763	1.46402698790757
Merged-chr14-105288098-1	3.03426113965451	0	1.33017753094775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116552966-1	1.89745128334705	0	1.49431493529238	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45426567-2	4.87379027888998	-1.20616990946814	0.781577432799592	-1.54325068617663	0.122769963586432	0.721165839936463	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1960053184109	1.56706844884727
Merged-chr10-26785424-1	1.91869970794671	0	1.56328658881727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115212732-2	4.06195161018667	0	1.34778241459219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40781380-1	2.97548449655708	0	1.34870064812528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27960689-1	3.12972049748976	0	1.36951501680427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34056671-3	5.76918031784623	0	1.2999597537777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99541733-6	17.9965139326313	-2.37875035764663	0.568096403945902	-4.18723009180173	2.82379519659348e-05	0.00115616366489096	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61172057941382	2.42139546294927
Merged-chr19-45161269-7	22.9657624697981	0.992242991485421	0.331718871473944	2.99121658974823	0.00277868332550051	0.0418666913968541	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2251984514121	5.18787539476854
Merged-chr2-3657015-4	6.73478562212253	0	1.32033336273679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31318655-4	4.64304471494844	0	1.31438845028594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79975284-2	5.62222000309679	0	1.30066642599894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88557229-3	9.39446515063256	0	1.28861034045122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177236916-5	15.7744104937598	0.531327834093896	0.448878008895129	1.18367980512503	0.236539836059206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73594117245469	3.97797156769883
Merged-chr8-43351167-8	24.1178723239788	-0.291449432054139	0.389099076005835	-0.749036556565269	0.453835172120421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88758193491599	4.64240217750736
Merged-chrX-166718314-4	10.2766942663081	0	1.29805868541511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53446347-4	8.83592326385713	-3.65751356640621	0.976998780439249	-3.7436214247492	0.000181386883742368	0.00506101934458958	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21107555271687	0.581381506691384
Merged-chr3-22010807-2	5.44180199184455	0	1.36097618894641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156024653-2	7.85690672166548	1.6631342265085	0.641816041230269	2.59129426450687	0.00956156936552807	0.107208358229203	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38998751089106	4.30259447890216
Merged-chr12-81845194-4	13.6320111958814	0	1.30324280305728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113271372-4	7.02178223053178	0	1.30821920461045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46881193-3	4.81998812437617	0	1.32566291182275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-157613029-7	40.1894393250254	-0.849309716984653	0.278226359831664	-3.05258537508277	0.00226879182059595	0.0357158444492082	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60349663000056	5.75876941924862
Merged-chr8-68837858-4	13.8339211460627	0.916189574958448	0.492921493583874	1.85869268612559	0.0630707107612707	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58602061260911	3.44262256427606
Merged-chr12-52308745-7	26.8253490522499	1.38820927222178	0.415183598943022	3.3436033498334	0.000826978843341688	0.0163608112313067	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04320528389946	4.45354405113601
Merged-chr8-8459094-3	12.9920504689276	0	1.30457576669766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13560361-6	15.3866831280123	0	1.28084322875579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-195012760-4	7.06552081057227	0	1.29500698381655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127929433-2	5.41244016646406	-4.73159312661557	1.0935775480845	-4.32671019527	1.51352884802111e-05	0.00070544262555483	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56535157450755	0
Merged-chr13-91697122-2	7.48145208616007	0	1.30229612300421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130501794-7	24.1026449117303	-1.14706668507911	0.314961715547519	-3.64192417191115	0.000270607790643023	0.00686990547294445	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47341222940569	4.29876595185372
Merged-chr10-60933019-3	7.62982138023295	0	1.29410591532878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31163464-3	9.12030203968269	0	1.29090703025743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44686858-4	6.58566211779623	0	1.30368757878325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149436571-4	6.87079921057085	0	1.28830505843532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60712297-4	7.58500932048102	0	1.30301047139281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46173142-3	7.23836629088591	0	1.335981952116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11323368-3	4.22642980464132	0	1.36984919358468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29842421-2	4.98783271695701	0	1.31339787203666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120833307-2	4.24280497245095	0	1.35346914814973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24591965-6	11.6169327014478	-3.43171394164458	0.788207583527045	-4.3538200004223	1.33785569372013e-05	0.000638678621251476	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37041394644929	0.666688015277142
Merged-chr2-152739507-7	37.6795267928729	0	1.28137794240247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98061258-4	5.8415309771701	0	1.31311612936124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120437477-3	6.51014485221859	0	1.32426137428183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105484524-6	42.0590227311124	1.74606207542684	0.334599382524583	5.21836610173229	1.80508401137794e-07	2.02324219223847e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12858776612733	5.09759981935381
Merged-chr18-52750165-5	13.4394303150845	0	1.28627737511751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68062399-5	16.3406098779405	-2.29437237922324	0.823325087681899	-2.78671500911399	0.00532452827585157	0.0683946196066603	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01623392731954	0.994591904006138
Merged-chr8-70562928-4	9.69954155950811	-0.21970843658134	0.874675403941391	-0.251188538732549	0.801668345324252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45895317577726	0.845523456341755
Merged-chr7-104398782-6	27.8494802731375	0.604155450934507	0.401661080523907	1.50414237333245	0.132544711868065	0.760560830850946	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30994059154144	4.29927497354275
Merged-chr5-86190948-8	28.0854168542428	-0.354515429445541	0.350497534484026	-1.01146340435013	0.311794687941623	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68587711796157	4.24705556894958
Merged-chr11-11785704-8	28.6618748109909	0.0629085301646312	0.352287734869996	0.178571445832045	0.858274216993315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3321877301007	4.47445271439115
Merged-chr5-62521262-3	5.84250240521476	0	1.33138696760691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5072109-4	8.42869800817045	0	1.30376126590227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86190533-7	83.1523166695084	1.47981324953943	0.429137942177059	3.44833934289798	0.00056404490791779	0.0120687880002606	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57133366839004	5.33230045444271
Merged-chr18-57085756-4	9.70270880262234	0.41507324304907	1.1882813875348	0.349305515851073	0.726859957901462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0.469435083901436
Merged-chr10-8974139-4	5.49727760635248	0	1.32077363708546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14985439-4	5.91108865368402	0	1.29307197965496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101733052-8	65.5152729142407	0.731126863137072	0.315017025983658	2.32091221372587	0.0202915822298492	0.189370712995105	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66215141433799	4.47530024791399
Merged-chr2-90515093-6	27.0149363061743	0.683905534567596	0.39523134396165	1.7303929584946	0.083560091061447	0.54185945326003	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47146692223567	3.84976498532322
Merged-chr1-166802142-4	5.94801438938989	0	1.30953353975912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77301954-2	3.70253937342827	0	1.34357793292041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84428776-1	3.04409117491192	0	1.35312530247432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52094689-2	4.55485034225495	-3.26312619539072	1.20074811702205	-2.71757760776968	0.00657617309656143	0.0803677963657945	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95595747161357	0.61242769162773
Merged-chr17-73990111-2	3.62853316131579	0	1.35027647961179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73307936-2	2.95952744384807	0	1.62230733273585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108825247-5	15.7550766365365	-0.462473271449657	0.626970200164348	-0.737631982075749	0.460738115175544	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47066616376008	2.03221224808718
Merged-chr13-95973597-6	20.4549349692287	0.559767753453779	0.367162418777933	1.5245780200406	0.127364383159131	0.739931808491874	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48237866169084	5.0241483927446
Merged-chr17-50470628-8	28.849029365846	0.637989305803908	0.354768097767187	1.79832772399558	0.0721250888245073	0.486793968918645	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86338411745093	4.43792894769659
Merged-chr19-42110689-5	21.3597336085085	-0.143973670628686	0.31997163266157	-0.449957608526393	0.652741007405806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29926903595657	5.16434171546894
Merged-chr4-72396611-4	7.6750012668632	0	1.33082692722171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45389409-4	12.0166224601277	-3.42746742444854	0.718182325029939	-4.77241962799023	1.82025755719102e-06	0.000129723551429062	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7269047640524	1.42436654726916
Merged-chr2-122581894-6	20.4571430349012	0.579644826878121	0.555129191759871	1.04416203558046	0.296410428330055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02650694514586	3.04508027146955
Merged-chr9-64704701-4	9.82842067794295	0	1.297723067679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19416250-6	24.707917287597	1.88011808982126	0.543010432502022	3.46239773176781	0.000535385337419809	0.0115883704071	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58630956684567	3.16468797403696
Merged-chr12-25190587-4	7.8959560067915	0	1.34345910951927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135981149-3	5.4645503542706	0	1.31182823357334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106016459-4	6.86091759098626	0	1.29204373633729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68282551-9	39.9385692449481	0.186117845425062	0.303564462733638	0.613108147604123	0.53980483324716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25931827107245	4.44375468384325
Merged-chr7-102513249-9	34.6798236845921	-0.201716227420975	0.308666763938406	-0.653508090236846	0.513428775495568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91318636016562	4.55956920487691
Merged-chr18-43477824-3	5.89487881003491	0	1.31298386044032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105291597-7	31.6777834267921	-2.32965955771675	0.512960213402043	-4.54159893272432	5.58291756664737e-06	0.000316590390867146	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58989717850437	2.38797369567447
Merged-chr16-4474655-4	8.22258342158737	0	1.29708232233683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36866886-5	21.6356310914066	0.506939414707843	0.430138862533055	1.17854827560225	0.238578098417922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52742806328641	5.15582809494217
Merged-chr6-50978778-2	4.16268742479646	0	1.35083426071467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129549981-6	26.3365250567156	2.08584890404499	0.485013754375332	4.30059742683264	1.70338261149652e-05	0.000776310145403524	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49078388695424	4.78120281922428
Merged-chr7-3709978-4	13.9859059671698	0	1.29024237890095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120452421-4	6.27062008051502	0	1.31098186095291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12886610-8	18.9263793593998	0	1.28470679006293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93576122-1	5.47870587181704	0.256445086006834	0.898741522068615	0.285337975057143	0.775385221683972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39141461648396	1.87496859647037
Merged-chr6-16855218-1	3.01549978753452	0	1.34805202028485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37479251-4	6.92862178867165	0	1.30282437613956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139598849-14	115.012621847822	-0.621644616637274	0.224646536661172	-2.76721210963907	0.0056537956571338	0.0714398694091962	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.62733700226251	6.00493135974929
Merged-chr11-11682783-3	7.46191797246777	0	1.29551987391972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126600715-3	5.92886639173226	0	1.30552101843628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11288649-3	6.38590473923707	0	1.30880830286828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124579484-2	4.30389290850205	0	1.32669077570954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120816518-4	8.88075422668772	0	1.30770891959488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166875072-4	12.3691456030752	0	1.28610606067999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121718013-2	3.63770510848382	0	1.37268117704454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76538148-1	3.49415347092808	0	1.32177214104529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48976486-4	12.8414799988274	0	1.28898033309994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76736143-6	18.0082056772746	-1.50543603001415	0.548124823635299	-2.7465204367679	0.00602311333333952	0.0750546079100694	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56599353461165	2.65211902171377
Merged-chr4-148901872-3	12.9378130046422	-2.1560446996472	0.598224187167397	-3.60407476978842	0.000313266872294417	0.00772772255075536	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44673459727597	2.14251121140159
Merged-chr18-77704481-8	29.4541013906389	0.32925984923224	0.310820863881704	1.0593235123288	0.289452470478657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74268481093886	5.05767610338527
Merged-chr15-67542602-4	11.9296464109021	-1.59592594520511	0.543187519816378	-2.9380755024427	0.00330256583736152	0.0476821624410574	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60243036579408	2.45362829364608
Merged-chr15-53416439-3	7.97012614160675	0	1.30683191402902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70943641-3	4.62361206746831	0	1.31116120997179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85525915-3	5.85221218890426	0	1.31322380454103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8823324-4	7.87363962595518	0	1.30694846040909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34071447-4	10.3556634493026	-0.376510383991287	0.740315337531086	-0.508581093628196	0.611045883978024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98868785567852	1.68807364458303
Merged-chr17-27977251-3	9.38862716481501	-0.798664506078249	0.660362534027394	-1.20943340199418	0.226496382583598	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37245409461524	2.26028312783496
Merged-chr19-46934259-1	3.19236394063796	0	1.34251309691451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167922040-4	8.14930825814204	0	1.30971664500029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36345505-3	5.98147209940855	0	1.31367735395455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16160638-3	6.44101936820569	0	1.3315922740806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117308072-4	8.08380038696704	0	1.30159759207143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96400053-4	7.50709418458526	0	1.31065051913441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102144022-4	6.9792875429441	0	1.30182764224538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4893691-4	6.08256791457207	0	1.29160624314046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4494235-4	12.571425878448	0	1.28707717061669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134205326-4	9.08668767558867	0	1.30398660100891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14905053-6	20.8741232908458	0.40645607619483	0.892620297831824	0.455351594829416	0.648856313178856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02329261010354	0.989878296978726
Merged-chr3-104481522-3	6.80635392972076	0	1.33833562922859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38382717-4	10.8183900996012	0	1.29741563779099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88336239-3	23.4237730783493	-1.02514960585004	0.359456215968208	-2.85194568993269	0.00434525239598438	0.0583768221768082	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16530059489802	4.07074162128046
Merged-chr2-124202771-4	9.11900865771493	0	1.303959044038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54391085-3	9.04897739603378	-1.16124350573214	0.702323999295462	-1.65342990827174	0.0982434001453926	0.612402291891713	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07005293075667	2.28300009677801
Merged-chr13-83064942-5	14.721234661516	0.0491026784481773	0.476434527311126	0.103062804296112	0.917913125645256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92725786125102	3.13634941273677
Merged-chr2-83744549-7	30.8174417182825	-0.569743101529951	0.319817143000239	-1.78146517158251	0.0748364897252112	0.50038527141959	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90698051625667	4.18064213525916
Merged-chr17-50330376-8	32.2293746223458	-0.443612797138633	0.346095480674559	-1.28176420065933	0.199925375952767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33876612132033	4.86754218575053
Merged-chr3-116109476-3	8.62273348772649	-1.21439684880169	0.888348521462218	-1.36702748916922	0.171616689367956	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29744073995314	1.72942046393685
Merged-chr12-104174562-3	17.7540599721767	0.412814174757401	0.416272018854903	0.99169330644175	0.321347157248045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32294177466743	4.81330100897291
Merged-chr18-36708443-5	22.8074038537332	-1.44567048085599	0.434075464942548	-3.33045886628798	0.00086702972763304	0.0170089836631368	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24323457933718	3.0453125110699
Merged-chr1-39784752-5	17.3051251644384	0	1.29167389380058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13256387-8	50.0040639811421	0.921051652742741	0.340848919849809	2.7022284628292	0.00688764176006147	0.0831633108745338	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98059384378203	4.97445709924172
Merged-chr2-27306910-1	2.53142485186831	0	1.34369723061555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-23839819-3	4.69910926299354	0	1.35379329814997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40416359-1	7.64290593633009	-0.259563679625498	0.533045354867078	-0.486944829845151	0.626297428493804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87896416248113	3.6600238962148
Merged-chr6-93066434-1	0.928831079430223	0	2.4109006822254	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91855093-2	3.58221864682885	0	1.36964330593656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21086450-2	4.47819308910885	0	1.35185297907343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62329233-2	3.62949883095258	0	1.37123622919986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88910232-1	2.27450813909194	0	1.63478544967636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111955698-1	1.51725719784681	0	1.61200428850826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96804503-4	7.1600998825993	1.26684197776597	0.958102036540206	1.3222411908659	0.186087848813732	0.967698278575691	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	1.37490486545505
Merged-chr16-85455380-1	1.83768844005188	0	1.4958125470186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21157802-2	3.83544866786677	0	1.39419918651337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167335917-1	2.34214634999014	0	1.38332486825159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19547021-4	8.76859875108882	0	1.29409011499649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128361821-2	3.20871866404858	0	1.36023318424197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32638341-1	2.25231923154486	0	1.3848013813041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-68859036-1	1.66431573133788	0	1.5033789145282	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40680716-4	5.80023529660698	0	1.31752071451384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98951755-3	6.27844260399693	0	1.30280218973799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112213682-1	1.60750792416177	0	1.43484284219561	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60288015-2	4.63841377501594	0	1.34313857790218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16205024-2	3.94012251034565	2.85629879457695	1.19681622064226	2.38658095145481	0.0170058629348129	0.165072061696121	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.10459859746439
Merged-chr16-24760921-1	1.60140685484598	0	1.55255642336883	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8849650-3	6.71407931748985	0	1.30138139794668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148978212-6	18.0516374553484	-1.43145642387494	0.502609207264309	-2.84805053943664	0.0043987938459146	0.0589627861856688	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30183526939815	2.46548184580302
Merged-chr1-136124441-4	6.61520941463614	0	1.31583760734066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11917550-7	23.7919307428407	0.721210606494419	0.40189577484388	1.794521494471	0.0727299709804198	0.48965718974722	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47507987445789	5.01754593552866
Merged-chr11-62103671-4	7.92317084379125	0	1.30556025903892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95773680-3	4.33967933860668	0	1.31647943330264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87648995-5	12.9379430128161	0	1.2850071593696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141958002-4	13.394730766182	0	1.28615593727309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102060420-4	9.04376478487798	0	1.30590051980028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104001681-4	6.56093557225203	0	1.29725181616248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41185533-7	39.0166369230884	-0.579194783099732	0.340127863788873	-1.70287366829568	0.0885917127196293	0.565564093334984	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71161717560038	4.05731840505513
Merged-chr5-125383051-5	19.3352130639906	0.770510171890826	0.70928588470418	1.08631820892951	0.277338233693341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12342234462223	2.72081599314607
Merged-chr1-156800276-2	10.096161641124	0.157720865347102	0.408626338151388	0.385978216824264	0.699512801577693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73534264228126	4.8756034975183
Merged-chr7-82881577-4	13.1312681360092	1.84710084756698	0.787468284648547	2.34561935201156	0.0189954958168109	0.179947763068328	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913467560099968	2.11197723984608
Merged-chr10-127542098-2	9.0759687359783	3.07614160707298	0.779371170770045	3.94695329060433	7.91519912956323e-05	0.00263487825940111	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44537674663733	4.56218510218452
Merged-chr1-174056082-1	4.18218933938578	-5.15606434995879	1.12427299647767	-4.58613198583678	4.51533217226115e-06	0.000266780195414627	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82023747642019	0
Merged-chr1-37419582-4	8.13923916917015	0	1.30135940197226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174086535-4	7.24118377795157	0	1.29619018561256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85123801-4	8.11453104489564	0	1.29613940801024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6749372-5	20.7207734628494	0	1.29046662421567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104732386-7	49.604480341273	-0.00745662127772171	0.447280511516071	-0.0166710175957528	0.986699068555743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06800358669842	1.9791255453587
Merged-chr2-50786625-4	7.30274846785914	0	1.31656422639627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92985998-4	10.4352520634891	0	1.28807155798744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94525150-4	7.7702188226969	0	1.29637871758106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158772999-4	7.10249998071991	0	1.29482017938046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152427918-4	7.93389253918264	0	1.31327569201091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23915587-8	33.4635439503461	0.357578225397558	0.390410090309713	0.915904158916309	0.359717165283152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40608180971038	4.58691781761636
Merged-chr7-83720482-6	24.4667752960255	1.46080480482592	0.406998289628001	3.5892160779376	0.000331673845553967	0.00809621184593557	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90131969284939	4.32058525457942
Merged-chr6-137273204-1	4.84770558487976	0.545307367588512	0.813195307455564	0.670573677183091	0.502492156035935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0968701910181	2.40500539984967
Merged-chr7-43668309-4	5.97978659433565	0	1.33144635710561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46915830-6	21.120970919601	1.15689421210017	0.443925222455274	2.60605650136658	0.00915913514838684	0.103669355902992	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05441746069248	3.74441155505258
Merged-chr10-25355181-4	15.622495859518	-2.45221731675883	0.759956347806595	-3.22678706985799	0.00125188583243192	0.0226295246489893	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6852757160567	1.26501898168246
Merged-chr8-107002704-2	4.27211415576517	0	1.3843296263383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146134515-5	16.6161714174062	1.12128122107999	0.409300345316542	2.73950714654985	0.00615313770639602	0.0763381661261642	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16748131084332	5.38299765683662
Merged-chr9-47651673-9	52.5049262562495	1.84655447561877	0.239336443238893	7.71530841951903	1.20690022936408e-14	1.5773220477605e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2180786802589	6.10786312698319
Merged-chr7-114301702-1	2.50140345335896	0	1.34553322363353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84180937-5	13.6862046886334	0	1.29214903058879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64531350-4	9.53127692679062	0	1.30000640432534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54939923-4	6.75950459830541	0	1.33594228692788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73596602-4	9.07381049485152	2.45500904219747	1.17389234432358	2.09134087471376	0.0364975181932662	0.295449926648106	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr6-134120476-7	25.0686716984947	-1.05605050319888	0.572322155207052	-1.8452029046767	0.0650080281376495	0.449858583785115	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11253872417941	3.09716266770032
Merged-chr18-50078277-3	12.0835557888927	-6.07177825150867	0.995694605745378	-6.09803268640119	1.07381792778796e-09	2.69883485804739e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87766292295052	0
Merged-chr7-80501069-5	12.4797334575723	-1.36785428711046	0.569649771749401	-2.40121975808007	0.0163405199313058	0.159944220406098	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60382190067793	1.98859768019381
Merged-chr18-79993620-9	34.6944476157763	0.992749023045976	0.266093969903774	3.73082119600447	0.000190856647187018	0.00526899808495263	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95252620320472	5.89351988701386
Merged-chr8-35408012-4	18.3757675817731	0.977837346445818	0.365438197864182	2.67579402525742	0.00745524474573539	0.0881041025764056	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84124915299619	5.64121903265922
Merged-chr1-191070932-12	45.9092338339711	0.0313875244009608	0.255162580623025	0.123009903428326	0.902099255726944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43404279059578	5.428313671254
Merged-chr9-40583747-3	9.08651074716193	0.726804923590798	0.69553039168372	1.04496501127919	0.296039140856847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11822096616023	2.67839755093979
Merged-chr9-71140334-4	6.30101750213784	0	1.3124635876539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55935281-4	7.76227331035045	0	1.29839134979286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30070511-7	18.9126507079965	0	1.27777831453961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19053815-8	34.6912071136235	0.0553556813279728	0.337457670463332	0.164037407275316	0.869701695905336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32590525668938	4.35801460953888
Merged-chr18-47327223-1	3.21376355179157	0	1.43954002211127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34807039-1	3.25369823927027	0	1.31943903419829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4583250-2	3.60915162275223	0	1.36805251406169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146709272-2	2.23320356560855	0	1.58780573391168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110999638-4	7.28964558586155	0	1.29330900275168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57603108-2	5.81264376566522	0	1.29974570460273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71704154-1	6.41077067540043	-1.82087185865147	0.806707918207867	-2.25716373615944	0.0239978454724892	0.215970694153048	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96761197607979	0.989878296978726
Merged-chr2-38483885-2	4.39281748008599	0	1.32902132263345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-4236-1	1.52098596202961	0	2.16897336614265	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53839932-4	13.1577717976912	4.17928331515534	0.988975424331089	4.22587175811984	2.3801752126784e-05	0.00101259719692502	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.63900399389441
Merged-chr17-25129434-3	15.8945069460527	-2.39215691517339	0.523905132870398	-4.56601160226683	4.97091266141559e-06	0.000287714135316974	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53305652769621	2.54316513336932
Merged-chr13-112106059-2	1.99318448317726	0	1.5670137732508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35739762-8	30.3741673425067	1.61258320878027	0.385930561443638	4.1784283751671	2.93530404391565e-05	0.00118994008176719	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81227148228646	5.44628707238104
Merged-chr17-55963313-4	13.5401590733717	0	1.29731441638355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120972136-8	21.639720136588	-0.354519133185073	0.37956800292706	-0.934006898503505	0.35030033451991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70355085374346	4.39121649776372
Merged-chr11-97718285-9	26.5454825951794	1.03004792486411	0.405126283528815	2.54253541856621	0.011005144684398	0.119438994277806	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08588841331687	4.06730895862708
Merged-chr1-166459076-3	7.96071074432326	0	1.32940090614842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13526423-5	13.197848142908	1.93389532337612	1.2466358385713	1.55129129417012	0.120831892204588	0.713737582769757	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr10-93946594-2	8.78477204391386	-3.64455498658086	1.01933349345733	-3.57542944480264	0.00034965346679083	0.00839399538608139	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72038461923605	0.469435083901436
Merged-chr10-117435108-8	30.4071570855195	-0.161975993187133	0.304993327345777	-0.531080448863387	0.595363031888911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12423791273568	4.97900542035213
Merged-chr10-89697737-5	19.2997795796234	-0.718514005097003	0.434906029084601	-1.65211323147059	0.0985114701365974	0.613548858592225	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44219747652355	4.79043338640697
Merged-chr2-163580426-2	5.55647238475052	0	1.31666159331416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25768887-2	5.20350754936883	0	1.32843194285499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117724487-2	5.47860414664327	0	1.31879999500844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98504647-3	6.56092331854918	0	1.29547471372969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24142054-4	8.74281394678923	0	1.28818952608711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32716258-5	10.7937162511746	-2.18487376475541	0.86849957026142	-2.51568779026311	0.0118800369183388	0.126373578457719	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78545921577572	1.03295826569721
Merged-chr7-127303219-1	3.11034147538194	0	1.35629365053434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137062015-3	5.81275787748411	0	1.31785665858904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29841030-3	6.28430713683434	0	1.29685449038028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17652896-3	5.98208709172179	0	1.40502858347486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53673680-3	6.06318198841626	0	1.32062032413212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71507729-8	31.0973812849266	1.47478714379953	0.429104612258144	3.43689417841148	0.000588425450964207	0.0124922837942518	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57963642129143	4.36852354670991
Merged-chr8-116974800-7	23.8119971631862	0	1.28593464020491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43709756-10	42.0331299262428	-1.80133851457397	0.345185229830787	-5.21846927070722	1.80407902334453e-07	2.02324219223847e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45429179917654	3.65436490062572
Merged-chr4-36183943-4	8.07442788185946	0	1.29024334496937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131511276-4	8.05843658286404	0.930330326529086	0.822303092870001	1.13137155216339	0.257898739836629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850037882615877	1.65117231954624
Merged-chr2-180115867-3	9.03192184441555	0	1.30995309926351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58096323-8	23.1301869446277	-0.644145355645807	0.315458058475274	-2.04193660088825	0.041157820576453	0.322796348652595	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04408128613832	4.38258916733551
Merged-chr11-84619847-2	5.55736586272081	0	1.3247740451703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113165285-2	7.3268372050742	0.218992974141025	0.67932731113774	0.322367392787807	0.747174383563585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97554684301845	2.71791299819427
Merged-chr11-70586403-2	4.48463110716022	0	1.33276080874472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101142018-2	5.44096718832276	0	1.89154377112934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-37043953-4	8.18616032000028	0	1.30175434579491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83844957-2	9.76651686612071	0	1.32303133345649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65550694-2	5.66178014760663	3.60445162703139	1.06289500912298	3.39116431641306	0.000695963613813007	0.0142431689032962	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.76628008406346
Merged-chr10-117944105-4	12.1310776951458	0	1.29576650845885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70554011-2	4.40462054689883	0	1.38088146010745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83885192-4	6.67658720764313	0	1.34526063566266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72330486-4	7.04294447203161	0	1.34554927657273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174236196-4	10.9698242700129	2.11454204531961	0.675976878022066	3.12812777192445	0.00175923685654662	0.0293787609578061	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40027823345619	2.92117589363366
Merged-chr10-14048631-5	23.3525953898101	-2.51326727878257	0.838399511673566	-2.9976964964659	0.0027202843127293	0.0411576056262118	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24558657301868	0.733321818366247
Merged-chr2-30783559-3	5.55523833220109	0	1.2917275561611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97954395-4	13.5485458388626	0	1.29703704516596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65319464-2	5.68089656380537	0	1.29752714820968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83010196-2	3.52560477650352	0	1.37221252887594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83732979-4	8.49859585320973	0	1.309205932014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71981406-4	9.80945361618465	0	1.29600588202032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100463893-6	16.5340187765313	-1.15469561438988	0.494446152543911	-2.33533137723695	0.0195261162354676	0.184014074347111	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36583180246945	3.36090915273018
Merged-chr4-99168916-3	14.3417415374046	-2.61562586575428	0.542880876696528	-4.81804752760967	1.4496984294932e-06	0.000109017250736445	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17535067358736	2.30811930973386
Merged-chr12-73594613-4	7.77350017223365	0	1.32283578161949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73889757-4	7.47613708892894	0	1.30349959373735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88939159-2	5.28973732810357	0	1.3804229164539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152608951-2	4.40615150214734	0	1.31692508993319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63712820-4	6.07794311638831	0	1.29992301561162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91936572-4	5.300013314605	0	1.30537071131519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48593056-2	4.94228630538922	0	1.29977359944146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-139379368-4	6.01579053289988	0	1.34451053712907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30767060-4	6.22304186149039	0	1.31549772004607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89003897-6	33.6956569256461	-0.0218058041063807	0.272450272739551	-0.0800359048538226	0.936208699611371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38437042631167	5.341206139342
Merged-chr9-48817046-7	29.0500756182374	0.639621391807584	0.311963858481952	2.05030606724781	0.0403345729021625	0.318167914155566	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55802917484189	5.2368632405227
Merged-chr8-122548047-8	29.6379002445617	0.0216714426547503	0.302399142803997	0.071665026738508	0.942868489189302	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4790305920121	4.53269739591987
Merged-chr4-133651674-8	32.6925519655771	0.701370800459715	0.318847505477798	2.19970609275647	0.0278277542493121	0.2418449832658	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15672048655467	6.0213732369209
Merged-chr3-127625429-7	20.9342643033041	-1.13946298903647	0.346276586332813	-3.29061517298577	0.00099968569099922	0.0190065351073713	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02640535671367	3.98932874103606
Merged-chrX-163306315-2	3.87408766062388	0	1.32346277601735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160276458-1	9.00354434742071	0	1.29602153188316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58466830-2	6.48043228905867	0	1.31614757533647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34541227-1	1.13410705444759	0	1.87525486736671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-28972709-1	2.97116037761312	0	1.41237333874408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81399336-1	1.16565856387041	0	1.74757737509	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136677213-2	2.15134134776801	0	1.45356063558897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84217373-1	4.44989230082656	-1.09396442915054	0.832865948870917	-1.31349400300682	0.189016540371195	0.978420998523084	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93396991559565	1.9699838995169
Merged-chr1-62763969-2	1.5579947806527	0	1.66051744651119	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32245496-2	4.88006374814919	0	1.32209544338351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51917311-2	8.73831521119103	2.51959177013536	0.784860416017379	3.21024187067624	0.00132623325095329	0.0235884697922682	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	2.44063292076442
Merged-chr9-71092282-1	7.17894202763771	-0.411094301093576	0.713250040184845	-0.576367722302599	0.564366656762245	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98422544408856	2.09145770840793
Merged-chr16-32159170-4	5.74830490955269	0	1.29289406982795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18443580-1	3.2216139284059	0	1.32298159520966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84962146-1	1.42297486558416	0	1.64313471071669	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29621392-3	5.66672621850841	0	1.30385822176891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41445309-1	4.35026424398916	-1.00785692091963	0.722205224439737	-1.39552704247119	0.162856965846966	0.878453825476366	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01819553980771	1.87822650685341
Merged-chr12-85703645-4	11.9027160331442	0	1.31964500402223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53799470-1	3.66004251203408	0	1.39620451583106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83659984-1	9.87635567674697	1.86376983249981	0.614043187484203	3.03524226062317	0.0024034254740067	0.0373849657282652	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45627824662103	5.12169109280542
Merged-chr10-39261734-1	2.81584884481944	0	1.35646654239325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104224983-11	48.7789019156488	0.109315148987084	0.234514704050349	0.466133453890441	0.641119978650472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55664231170081	5.62191344045489
Merged-chr14-56875905-6	12.3689252158854	0	1.29713990476276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38020381-7	26.1893540389872	0.621036808983088	0.336205308036484	1.84719513386058	0.0647188643924785	0.448237298631786	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53284644002842	5.20009127124677
Merged-chr9-99498097-4	8.59306125351889	0	1.30712404612968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77810841-4	12.6710437264378	0	1.2827583849012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26587749-5	13.8263114973215	0.278455838078138	0.483970664344167	0.575356852373431	0.565049978959773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39760801381463	3.67244103178494
Merged-chr5-38494016-3	13.2403774587915	0.162135817269638	0.769523695708275	0.210696328357253	0.833124239841756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74252555755464	1.41926493179619
Merged-chr7-101369146-6	33.3176278405515	-0.490472823181569	0.279053267236239	-1.75763153766033	0.0788102235909187	0.519775219092871	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34902879202456	5.81334663431999
Merged-chr9-48745153-6	26.7782152734931	-1.19006114456917	0.542248198302807	-2.1946797578931	0.0281865777561352	0.244086948058893	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06021949583319	1.78035432918822
Merged-chr6-108759528-5	13.8112927686065	-0.0981028183840069	0.52673284498303	-0.186247771177374	0.852250463293594	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48190362712714	2.71716125803294
Merged-chr1-152511439-3	7.286534384025	0	1.31886835331796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63925462-6	17.2330802343414	-0.867487946009037	0.417773661044923	-2.07645437445554	0.0378519467498669	0.303493657952982	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18047898293777	3.05530521385416
Merged-chr11-46846095-4	15.6229748028451	0.684653930659406	0.355108325947079	1.92801430051921	0.0538533474472628	0.391173950220663	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02001303505042	4.70498921438658
Merged-chr7-84784373-2	11.0892264247943	-1.13984944634816	0.633344286346288	-1.79973115874126	0.0719030986179764	0.485685161681947	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23971157806482	3.06179571767529
Merged-chr3-126923765-2	4.44229248838289	0	1.33261058278489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107677007-3	5.33016210435009	0	1.33907228907535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31056783-10	26.9308656088134	0	1.27998582446271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138133613-7	31.0976989306113	-0.667161466060416	0.259795818776148	-2.56802233847833	0.0102280564677402	0.112837868886972	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13666183254731	5.46126078860037
Merged-chr18-9504264-9	52.0261225510985	0.223763743186499	0.260678802843486	0.858388717247749	0.390677855648215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07202356710988	5.31143278622551
Merged-chr14-121346648-5	11.6002710410998	0	1.29876650389102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144696858-4	11.2309763396735	0	1.30117913425306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35100481-1	3.35762635440929	0	1.37324157966646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53108423-2	6.67197502699204	0	1.30295093869854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13370048-2	5.44520065993202	0	1.31687387266984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47446987-6	26.5463065628531	1.11674777568031	0.392839850185937	2.84275583332937	0.00447253197660908	0.0597184459631175	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55679178791266	4.7635381279284
Merged-chr6-50144842-3	4.96188790985191	0	1.31169343590103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64052212-4	6.21002694701569	0	1.29754197444456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58269089-3	4.99758942404328	0	1.3155711631525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35747019-5	22.3038272040151	2.94962562725987	0.50427221846331	5.8492725144534	4.93727616054735e-09	9.80642091146284e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68645708856227	4.57936894082776
Merged-chr9-96559272-4	10.0910044007937	0	1.28372160408955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31077500-3	6.74250939157828	0	1.29434694947162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59867435-3	6.29967720831057	0	1.30614653525944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136309964-1	7.56367079227362	-1.19495160261437	0.655178474589122	-1.82385662679738	0.0681737503370368	0.466333286875747	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15140798948353	1.83247173307855
Merged-chr9-111039185-4	6.79594032254604	0	1.29158161869505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33128368-4	4.89238470888003	0	1.33095351876519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114884133-4	7.27425123102615	0	1.29435491135427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31954422-4	8.32374116327224	0.110210709884515	1.29020931160978	0.0854207986973883	0.931926858623882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr2-117377913-1	9.5598769238949	-0.786449228761106	0.558541443455539	-1.40804095734699	0.159118942451457	0.864249556431963	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23282652159437	3.63442641196814
Merged-chr3-58122896-4	5.43260158815498	0	1.31184591484055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32431247-3	8.67595108027195	0	1.37580096231576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111570689-3	5.3731096868132	0	1.38821249209621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-56131760-1	3.53568723842414	0	1.35100800595024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131052704-7	25.8377956989696	0.100290279835414	0.407569429099734	0.246069191344752	0.805628671677121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44903163115549	3.33192050229581
Merged-chr10-43849676-3	7.94173867563984	0	1.29620495352614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35267230-5	22.4562787710572	-0.660502485556639	0.360530162138748	-1.83203114446344	0.0669467806557219	0.460129943568665	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47599408974996	4.74292664769243
Merged-chr17-33702349-6	17.3421449722906	-0.806979166102722	0.501322473114597	-1.60970076024949	0.107463198924083	0.655247755611936	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02466566499195	2.41742058901694
Merged-chr14-30695809-4	6.97019887051911	2.47444083383433	1.18305980638263	2.09156022416167	0.0364778737980986	0.295412460182247	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr12-76538086-3	5.57605153741177	0	1.32883495017581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62027865-4	10.8604905979537	0	1.29821269818129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193858961-3	8.79196986732067	0	1.29995926116139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12252404-7	21.5154475087453	0	1.27649938878706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-76001395-1	2.87048606388179	0	1.40083006649548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12376370-4	13.0391799089573	0	1.30101335870444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126986850-4	7.97372235601562	0	1.30720942954693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72379616-3	7.44349579141477	0	1.2971609564568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95019510-4	8.68348650330895	0	1.29751824065422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65774076-2	2.95799043677578	0	1.34479128569474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70698484-1	2.35340502780915	0	1.3990153459069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154842405-1	3.54281495997537	0	1.38195171221654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62869811-1	1.60311857124463	0	1.70848086222187	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34449533-3	5.42419484306201	0	1.31234283248768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162165902-2	4.30622962379613	-0.635750422671144	0.672342352550102	-0.94557545015546	0.34436517074507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59589598723524	1.98485448024296
Merged-chrX-60231137-2	4.8292589351227	0	1.32491337081104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52966413-4	9.17637674200099	0	1.30363831576847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95924448-7	18.7132347344815	-1.90999839158589	0.480845478336837	-3.97216668895848	7.12218523503049e-05	0.00242778464459209	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83165289927554	2.15476068525901
Merged-chr9-32709915-6	24.8018912644027	-2.56066928751445	0.671525127710235	-3.81321440084576	0.000137171017981051	0.00407250219945015	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52909540802251	1.1517642783294
Merged-chr4-120955847-4	7.17744027774028	0	1.30332868574241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6715906-3	5.89587017880609	0	1.32677869243001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29762713-3	4.75822675299968	-0.246019840767604	1.13064016354547	-0.217593403011736	0.827745924976599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	0.469435083901436
Merged-chr8-108847129-4	13.2126576609736	0.21407274947228	0.568238249684134	0.376730622395229	0.706373803347188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56428219443912	2.30779555871676
Merged-chr5-147911308-4	14.0188725951378	0	1.29045023052776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35036359-6	15.0644521392593	-0.991848861343408	0.527612994149631	-1.87987951839966	0.060124499873914	0.424332602739041	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83217548093692	2.59016101190973
Merged-chr17-84028706-4	8.0257947675525	0	1.30407228221774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110993517-13	110.265467994889	1.7314514519213	0.188973972149955	9.16238057666137	5.07648498297566e-20	4.14659984621909e-16	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64012867633291	7.37327386668544
Merged-chr6-136745897-2	6.10906280199347	-1.30132523940672	0.672784392454711	-1.93423815118352	0.0530838536639775	0.387015229446198	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53604524830057	1.87552666999187
Merged-chrX-163302891-4	9.77189839220817	0	1.28557138704599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72901866-1	8.26721182892331	-1.16262546595451	0.590419460875142	-1.96915166758091	0.0489356771600028	0.365081717056461	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08199994262933	2.95988517553914
Merged-chr13-37581092-6	20.9138202305271	0.716177557669819	0.417641095916739	1.71481581834704	0.0863790004331588	0.555225633402788	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08619566169112	3.79603832150636
Merged-chr5-109845055-8	31.5123757199913	-0.00929018009422111	0.351546462536456	-0.026426606677226	0.978917072498065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19635428174757	4.29176141143561
Merged-chr6-51520826-3	12.6872668664852	0	1.30079696129404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108426435-1	2.67657997990249	0	1.5516722568773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50303710-4	5.35469623574815	0	1.29687595552239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19047632-4	11.5162311767624	0	1.29297169701992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22091274-2	4.28992181707108	0	1.31981443252802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101998435-5	17.9102660479537	2.07966358171268	0.41846161093745	4.9697834337868	6.70277241557146e-07	5.86344533156537e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08761283146584	4.41942115245051
Merged-chr7-118488413-8	33.6786192686546	0.119323678404259	0.322310442636755	0.370213504185893	0.711223415432128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34460915633525	4.47558884541192
Merged-chr14-61328136-3	4.21701496238679	0	1.31165108615696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11709568-2	5.51964595379645	0	1.31536403719245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129360839-6	20.9665326675165	0.0289138795439884	0.433208938995885	0.066743497054808	0.946785905850406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82700574100564	4.82758873272592
Merged-chr2-33908570-1	4.44655929921579	0	1.37310013370237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127398040-8	18.8818156811804	-1.18703606885079	0.499694043406102	-2.37552575323794	0.0175239694844611	0.169046547081724	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86714414800488	2.19316068746724
Merged-chr10-57637194-4	7.57710451850446	0	1.29897815302403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98121916-4	7.60424631169714	0	1.31333787466198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106106361-4	8.79682361141314	0	1.28963374387679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137367924-9	45.8324886624682	2.4559200448706	0.486834339219615	5.04467299658316	4.54297639543047e-07	4.32118392337409e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57062439559634	4.63550964954847
Merged-chr7-80192427-9	38.4471127309606	0.671776745942325	0.345559203606179	1.94402793770738	0.05189208218434	0.380918894902031	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83425717092976	4.65213719452335
Merged-chr4-43256372-8	22.8135305447631	-0.592548655022233	0.315762900982871	-1.87656198108712	0.0605781522564243	0.426842779528607	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30118654051985	4.57299829933437
Merged-chr18-76005949-1	4.65530686211893	-0.230576653417091	1.05986256763107	-0.217553351216525	0.827777134180771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07358707849765	0.683637474991079
Merged-chr14-51083122-16	95.9899112653666	0.0709189650683124	0.191128863888683	0.371053139883765	0.710597952418624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.551237935568	6.60133155744414
Merged-chr18-38946597-8	50.3463527465494	-2.10445491530739	0.354576493928333	-5.93512246678355	2.93626240528111e-09	6.20948230211973e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.52106411128668	4.27652551373361
Merged-chr4-35240076-3	7.1554655717705	0	1.31075504192821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111968754-4	12.2473480962174	1.35861931021195	0.654532480963244	2.07570953272255	0.037920823752386	0.303971313655963	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83592323586791	2.91804444328128
Merged-chr1-160861407-2	7.9300975856194	2.00310249267015	0.586922069809727	3.41289345844421	0.000642770658566488	0.0133893820384717	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21410983449401	4.25702127078805
Merged-chr4-12546647-1	2.93567521070058	0	1.35691932609667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41039043-4	6.11941074001327	0	1.33073544008897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12007825-3	6.72419813433961	0	1.29242483095497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18995737-4	8.41985683714902	3.27730936107118	1.10965880047146	2.95343880450346	0.00314254908558404	0.0459203454764726	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.793480537552656
Merged-chr4-120040334-2	7.82134956859852	0	1.37033847713753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152352949-4	5.07039473769449	0	1.30765051016131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51499022-2	4.62726922333295	0	1.31223079078533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25961864-4	11.6872511455483	0	1.3191477766279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172563279-7	20.2098066679863	-1.94609828489677	0.679007406597525	-2.8660928673055	0.00415572316641912	0.0565749762568383	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24860746718313	1.59691199589682
Merged-chr17-28435095-4	8.29833341937175	0	1.30359993891882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32903925-8	21.0227133370011	0.278119325653874	0.36119152707716	0.770005121394945	0.441296854733531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10989980915931	4.30050681911561
Merged-chr5-103824843-3	6.36745782202427	0	1.32174645951677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40617955-4	16.4718621568814	-0.449418340434776	0.56461110508918	-0.795978570708047	0.426044490974666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72750485842603	3.46654535404304
Merged-chr2-72848602-4	7.79061124109939	0	1.30481481911294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83064261-4	12.1452465942568	0.793409221185523	0.782037216815806	1.01454151301906	0.310324431248267	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09786053466654	1.21171060354126
Merged-chr19-34390154-4	7.37257726297632	1.82756620557231	0.991987457638862	1.84232793620425	0.0654271958038923	0.452088985619239	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	1.27911570690487
Merged-chr12-111915022-4	6.75751887560886	0	1.30023867167513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121929092-8	28.854269339565	0.113873801890207	0.317419947740093	0.358748096018994	0.71978354466783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41343759691199	5.6040589012699
Merged-chr15-66297641-1	2.69944339432974	0	1.40538314752223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85974217-2	4.41592931008157	0	1.32691012515524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68801572-2	3.92871250940205	1.94535539388162	1.30623667856276	1.48928247522652	0.136413000515236	0.775606363148753	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr6-17612410-1	4.13310513619739	0	1.32651297589664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48270895-2	3.72988797789384	0	1.35462077831978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31388527-1	3.50380098438403	0	1.31554749376829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110114878-2	5.02164049900222	0	1.3887004447627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42295932-3	5.90940718835106	0	1.32745383228108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4297472-1	4.98340211068321	-0.20111896924236	0.871239327727477	-0.230842390651664	0.817437247505891	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50703611506153	2.76998768173439
Merged-chr2-127302068-1	3.01009531175597	0	1.34165761167144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119846087-2	5.48475745252291	0	1.31574471392099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93248107-1	5.53151577813043	2.37486400807732	0.695486637878505	3.41467956209992	0.000638570876259316	0.0133146306573201	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86383143398859	4.25325959534148
Merged-chr17-35269847-1	2.12332388650303	0	1.41532702771144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17415233-1	1.62245060152141	0	1.71964441692596	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33176686-2	6.32430282833324	0	1.33818447066196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11548259-1	1.60910793671421	0	1.46699619115421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9255200-1	2.24765197572535	0	1.37655302409239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37472805-4	8.80548561743866	-1.133996095631	1.05624966506952	-1.0736061114456	0.282999257335207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35548392245748	0.61242769162773
Merged-chr2-126474697-1	1.63931478620632	0	1.5351274244463	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-6854360-1	2.14139097818597	0	1.47815492592497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-112345496-1	4.65504791212742	-1.61872390749446	0.772608650709352	-2.09514080124299	0.0361584778557151	0.293699427465452	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27095499444787	1.76620369058164
Merged-chrX-167151631-1	1.70425648587391	0	1.54493018271158	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49192369-1	1.9132687318608	0	1.45480118101	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91599780-1	3.62795087376445	0	1.3526278387343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50033383-1	2.87732153098086	0	1.39482413225203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144274956-1	1.94949822572482	0	1.39990501121897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55389001-2	5.63841050353002	0	1.30294846755507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119048321-1	5.11591189032253	-2.1541590711702	0.779533215003185	-2.76339613208322	0.00572032954373396	0.0720649034827143	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44562678594288	1.29948469469889
Merged-chr3-51170416-2	3.75384611252455	0	1.3355893794258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-53082088-1	1.50405056308499	0	1.55185810179142	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5818429-1	2.13751069150402	0	1.3939146155761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64310058-4	7.58743547593601	0	1.32249996283771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9776039-3	4.98699997287047	0	1.30803903710005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45101959-7	16.9771152286712	0.727129683879085	0.586132577177523	1.24055497372373	0.214770194110851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58069132785023	3.73132717883103
Merged-chr19-12002371-4	7.72822771885858	0	1.28981858391859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148586819-5	18.6195077681668	-0.888446071324545	0.327157242028434	-2.71565460637832	0.00661448844517143	0.0807303627079142	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54769752643576	4.63495418563559
Merged-chr6-70864486-4	7.97874767903253	0	1.29879893320943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6357659-8	45.3115771033895	1.35351771024454	0.358269575835297	3.77793092558542	0.000158136722994291	0.00454824044928915	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30112714412231	4.59548647074504
Merged-chr15-77933876-5	15.4020682838333	0	1.28089217637092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171397818-6	13.8996365120645	-2.72329589225553	0.634726421475787	-4.29050343599004	1.78268527582221e-05	0.000804498287526783	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42654973452998	1.87744667331019
Merged-chr18-84092187-2	5.31371243911508	0	1.31406050259066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180889963-4	7.1855117891147	0	1.30651529426415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80853532-6	25.9365964922029	-0.462716242505019	0.390333255613908	-1.185438944415	0.235843941487249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17849360783562	4.62987693203124
Merged-chr6-120473744-8	54.5119607453009	0.282684532230591	0.314876566344066	0.897763004445687	0.369311911923201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04510799554745	4.38405380899497
Merged-chr15-59037806-4	7.797091477072	0	1.325983757642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67172845-4	5.73360036293545	0	1.30624769985305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47319790-3	6.55469462337285	0	1.29916912907497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80778566-7	27.9920846074082	1.05801677253105	0.350848992930783	3.01559016513917	0.00256479669994272	0.0392779951147075	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45722534641531	5.57409117175491
Merged-chr9-107313145-13	48.1600194999206	-0.412003775738597	0.271232246848821	-1.51900734711769	0.128760646633186	0.745194687352068	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47142019697137	5.10416521236499
Merged-chr9-121561272-2	4.55622166163172	0	1.37045550458614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101097078-4	6.25703738370937	0	1.2946812418057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76114957-2	3.82407582550896	0	1.35960138513778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21729227-2	5.44633990291889	0	1.34036608757323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95844062-3	7.28532493068221	0	1.30439104301843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95279043-1	3.75500746017329	0	1.33285823818518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105478464-3	8.26973297315952	0.173728063310012	0.728576178650014	0.238448728356608	0.811533077343446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04901049390002	1.92713101668536
Merged-chr13-42984863-3	15.8400672943913	-0.678368457161175	0.515192047630038	-1.31672928625699	0.187929383265967	0.974660881513435	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2290028761824	4.45453010171059
Merged-chr1-54837853-7	34.3771353316035	-0.414056513758803	0.319323536337491	-1.29666769480214	0.194745549324095	0.998991599280634	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67207296964536	4.27240196627825
Merged-chr2-164860998-4	7.60549465145182	0	1.29792310484474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53802055-3	4.39201097580559	0	1.32875895373527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40310398-4	8.16612422926758	0	1.29329403626208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-162939806-7	24.1989224192296	-0.00980087231897329	0.412293701357507	-0.0237715790629428	0.981034810263358	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81629380645127	3.16917032521126
Merged-chr16-73473746-4	10.5416112836399	0	1.31072981826769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120880930-2	4.96173638261471	0	1.30976765294161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-118063816-2	4.08922079370137	0	1.31108017611399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114302956-4	12.1686854468619	1.44270830461162	0.477683984929565	3.02021493315156	0.00252595363843169	0.0388378744604605	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58410203675868	3.16902509079066
Merged-chr7-88192859-4	19.2113034164586	0	1.29188715900486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30160428-1	3.61780609549272	0	1.42192156816003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134761930-4	7.3122333971286	0	1.30953553041832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92783818-1	2.27746524187534	0	1.40714183932258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-87238383-3	7.17320040086172	0	1.30678313825544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52267609-6	22.7015466420348	0.798062688913055	0.407589300754979	1.9580069629767	0.0502291956585476	0.371971557060681	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30230354700308	4.15250691631047
Merged-chr12-118994453-3	10.5351228356982	0	1.29891049164912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94582673-4	6.92155077564378	0	1.29678997542939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74260581-3	7.45049064216912	-0.717950138094405	0.663030581046236	-1.08283110706826	0.278883395480192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02397466241171	2.10419491793461
Merged-chr13-20292452-8	26.8483227237751	-0.7938627455922	0.296974979301733	-2.6731637374259	0.00751395652281975	0.0885954930201531	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24801127372565	4.33410130948216
Merged-chr2-167314866-2	4.28093981485944	0	1.31341676680263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145029826-6	22.8419335696491	-0.855658567832091	0.379500274203973	-2.25469815437391	0.0241522815920683	0.217061613659097	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0421092345871	4.20513700404751
Merged-chr11-44545377-3	9.43703709617809	1.31283493548825	1.29639971589767	1.01267758654143	0.311214187048002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr5-64412536-6	18.8457575176367	-1.24354634697417	0.61066194789478	-2.03639075803105	0.0417111327382476	0.325373723279638	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52978607879308	1.72927293046596
Merged-chr11-110472244-8	41.0344949004138	-1.5367852040287	0.326977072571178	-4.69997847844259	2.60188909881831e-06	0.000172437165366512	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59761855498032	4.12532516794893
Merged-chr13-19364595-1	6.24705049050401	0.664520867305525	0.933998662937628	0.711479463166963	0.476787172654872	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.921214647921698	1.08764913775046
Merged-chr18-9491618-2	8.41273216486275	0.668818288384664	0.954669459751003	0.700575766359076	0.483567806295663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.854675866246237	1.20539659680455
Merged-chr1-93115315-4	7.52639122532505	0	1.29762443329668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64107836-4	12.9418401220699	-0.597713030540738	0.698848940555435	-0.85528215878196	0.392394962080515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93693767923544	1.76628008406346
Merged-chr5-104947153-2	10.3269203143019	-0.772604333069924	0.670572070950362	-1.15215704103954	0.249256546998562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51524861696377	2.51741075009849
Merged-chr2-71039888-4	7.36095074104409	0	1.31245176258171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157248254-6	18.2733201752841	-3.19889765378795	0.70820034228365	-4.51693886997123	6.27400078709116e-06	0.000348623176388826	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53979013036814	1.29684500016202
Merged-chr10-120702046-4	5.06060326574272	0	1.30492766184549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67414712-4	6.81869805967266	0	1.30138179380155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131462780-3	6.30331362866662	0	1.31357624857973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99664641-4	6.6375584109799	0	1.29773902944245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25090296-2	9.03633643182374	0.664499254146238	0.755399736719742	0.879665721134307	0.379040424390104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58070002640227	2.47837108115259
Merged-chr5-102576887-2	4.10760120750587	0	1.45971392328807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139282428-4	7.79750237848313	0	1.29548016345872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115124915-1	2.38270432833979	0	1.39772335249926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58461954-2	2.78369131688173	0	1.36102532126328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61332375-2	4.27602605283088	0	1.34142329101463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77921790-2	3.72764673159838	-2.53036693146047	0.85126128231329	-2.97249150646701	0.0029539338303844	0.0439298498134499	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41178705436365	1.00443616959195
Merged-chr10-40643436-3	9.15549432885945	0	1.30621501058313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94228075-4	8.87691257797761	0	1.31680348676401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123925578-4	19.6462084896543	0	1.28879277123442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3284627-3	6.64186800267744	0	1.33362964325413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19551792-3	7.67082176569505	0	1.29633410498325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6717183-4	6.50347802878811	0	1.30740198421045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172352667-6	20.301644990104	-0.958489586315974	0.496997058841619	-1.92856188837412	0.0537852742124546	0.390951338007459	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75954475522844	2.84681464190051
Merged-chr4-133465317-8	26.8093685748456	0.807563101526503	0.319133364855403	2.53048784758812	0.011390403060858	0.122481039725988	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66705850201372	5.42045212880465
Merged-chr8-35109856-5	22.4571254003597	0.759586560156754	0.379136457112985	2.00346483675241	0.0451274182149462	0.344376535171537	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4148682619514	5.15115803156253
Merged-chr2-153338908-3	5.04463156079255	0	1.30291948708895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56801116-3	5.47949521931738	0	1.31328109916556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17932074-3	7.49299011674356	0	1.29115939445726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105694346-15	66.1642795795663	-0.0980172166661499	0.240391223324793	-0.407740412942275	0.683464264367921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17076725323115	6.06248004259635
Merged-chr18-36472495-8	55.550597248193	0.397408245810023	0.326501800514528	1.21717015092644	0.223539484455481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22034544298093	4.45585958047665
Merged-chr5-86935468-4	9.727618580572	0	1.30692577884642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128559389-2	6.00836298592874	-3.62090864228403	1.02299036966583	-3.53953345960318	0.000400834954350295	0.00930478185682927	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63925886084333	0.469435083901436
Merged-chr6-120174493-9	52.6915839042936	1.8744815077007	0.382068385092006	4.90614136327795	9.28855906342063e-07	7.5587818251343e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96729769288862	4.94397871409038
Merged-chr16-17409726-3	6.48801805946328	0	1.29769413654511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64036533-3	10.6347566014132	-1.66638650765715	0.571442156770365	-2.91610705985556	0.00354428858790523	0.0501418233525125	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00884976918701	2.12463916324663
Merged-chr10-127592969-2	7.57730268415876	-0.963189866588436	0.66431914007061	-1.44989028388684	0.147089117212676	0.817181215216762	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09049277823461	2.42194161705889
Merged-chr11-23659117-4	12.4345885745603	0	1.32020856323126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77517870-4	7.00029894018364	0	1.3037381842652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84882789-2	4.58468199628332	0	1.32806350596565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126829121-3	6.76294565741311	0	1.39006139481308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130491008-3	10.71766687007	0	1.29551364034931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153386885-3	4.22968126841378	0	1.33542376127231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3699637-3	8.12458520421131	0	1.29209389052423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53409723-3	8.45430404615723	0	1.33627202170403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82761488-2	6.2554203088431	-1.28938779051066	0.831686676206712	-1.55032878053488	0.121062622862728	0.714630366177761	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56956063713485	2.52759435616534
Merged-chr5-122697463-6	21.858116670151	-0.184388990316595	0.35947163553559	-0.5129444776411	0.607990159665149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31733118888055	5.18329703432931
Merged-chr3-127932676-5	33.8920830688161	-3.16346306628289	0.43748645782114	-7.23099654795767	4.79462540844137e-13	3.72987609452393e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0873030480977	3.05353529260579
Merged-chr4-132748965-8	29.1876358540675	-1.31128414830993	0.496533596594372	-2.64087698658011	0.00826917377209407	0.095520139528241	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99577300519703	3.6758573049815
Merged-chr1-86437574-2	5.61395116666872	0	1.3188765180686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98089566-3	5.02614347758824	0	1.32498468530418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54768541-12	77.7592312149814	-0.261838874470627	0.273769663896263	-0.95642033797376	0.338859913592028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28405509445153	5.02234913506424
Merged-chr9-37232610-2	5.81834602453988	0	1.35370730200888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21286334-2	6.87055788848355	0	1.29754539845611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152428481-4	7.88608287634876	0	1.30613958878995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143466442-4	8.42311498231782	0	1.30341344363104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53707962-6	19.5161446908944	-0.00409902739485795	0.518877145756758	-0.00789980331255429	0.993696934462724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40639333935023	2.3248654278002
Merged-chr3-151294166-2	3.73020435127445	0	1.32907746714152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72188317-2	4.66710378768776	0	1.36516032698919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148509383-2	6.26627019768097	0	1.3087366733699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50322064-2	4.23687536408522	0	1.35270573149359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-39881745-2	2.80940822798432	0	1.42851213570256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105286519-6	32.1730190983021	-2.22696734161826	0.329729309553387	-6.75392595409444	1.43897208966346e-11	6.91404927729035e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.60445428424303	4.33337843846775
Merged-chr5-67297619-7	30.0720456787486	-2.42441384415898	0.404766525897702	-5.98965993737265	2.10280252034568e-09	4.72198396888347e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01914877303832	3.64375032124195
Merged-chr4-119339088-5	14.5582709219587	0.710161026604565	0.426459442603589	1.66524868641422	0.0958631513096091	0.60057220935246	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02861760107165	4.62356763415655
Merged-chr1-105747343-10	27.3283133825028	-0.172856901199577	0.342269310827481	-0.505031844022685	0.613536470070498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79959062423242	4.65631566108987
Merged-chr11-114702828-3	5.24213580818282	0	1.3155784703619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153796248-3	5.18387248997554	0	1.32976989210376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72467195-4	7.83237372441349	0	1.29620993291179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111035844-4	7.06100244813501	0	1.29572697391317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119396234-7	23.2408239562769	-1.07513149256285	0.335985431890562	-3.19993484989267	0.00137458655542006	0.0242504678861984	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34992942955836	4.30720498791915
Merged-chr7-80091471-5	11.8733440946683	0	1.29684725022494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22873433-3	11.3755941693406	0	1.34161634330017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149641839-3	5.57289144653382	0	1.32447211709701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168579725-2	6.1799934693313	0.814017939291119	0.807822780016317	1.00766895837559	0.31361341190022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63198789247757	2.69623661795924
Merged-chr11-55446845-2	4.78387699558247	0	1.32460632694734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82815350-4	7.88822233615024	0	1.29108775588152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95571133-3	7.81263432922874	0	1.31922411966639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167334785-4	6.83480380819358	0	1.29755626395629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62045178-6	15.4552915903765	-0.386195672450559	0.434535239275043	-0.888755703898421	0.3741343867591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42018354072089	3.59886499916325
Merged-chr6-136742550-6	21.015528773691	-0.85111510634038	0.306843776706867	-2.77377340180982	0.00554102587583427	0.0705129263646088	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42245332472865	4.53156771048028
Merged-chr6-108844210-3	9.23931842748833	-1.41440007775234	0.781282491777756	-1.81035680773285	0.0702404727938922	0.476925803739576	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33358891317216	1.34805514843284
Merged-chr1-127859282-6	27.0504085522575	0.0171712019502485	0.409148069306312	0.041968185208258	0.966524060287262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57676293352645	3.12295565357098
Merged-chr14-47735490-9	31.7803249956063	0.50985110653089	0.357210716022434	1.42731190208434	0.153490011441624	0.84327882021728	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67551013062869	5.26448679581815
Merged-chr6-56909116-4	5.57479652468591	0	1.29989613912363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34762902-4	20.6514381616249	-3.29439441023657	0.475134593847746	-6.93360250525611	4.10256388677996e-12	2.23405116454603e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78906107367953	2.29675716151532
Merged-chr16-45032809-8	30.2666046609092	-0.177225354382372	0.365955797033252	-0.484280767838932	0.628186623005968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2725135164247	5.07142401388795
Merged-chr9-45396099-1	2.50217499716914	0	1.36191774690694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36324180-1	2.18911897043305	0	1.34984507896043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62774513-2	5.71263082875624	0	1.34030744067917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69556863-2	5.8444959155597	-3.44023929095114	0.881382266852082	-3.90323179888585	9.49167192581163e-05	0.00304189697726379	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08600880254297	0.918668513615376
Merged-chr8-72033056-1	1.71438048421405	0	1.57120363128963	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64503672-4	9.67720524708875	0	1.29520047600811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53986391-5	24.2545172813343	0.499691951295136	0.527284585491512	0.947670318921507	0.343297315604149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79224399801151	3.12570519757736
Merged-chr18-56819961-4	10.7714999207197	0	1.3000880044355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44760146-1	6.17276280529767	1.33540353797224	0.677795337219578	1.97021647190769	0.0488135665288403	0.364420349410899	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18856519859224	3.92769072268161
Merged-chr4-145230833-1	2.35807750451884	0	1.42794424081375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163303908-2	2.64355274046194	0	1.35773712910507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84512989-1	2.77826916298799	1.29262734200415	1.35458530280398	0.954260569141288	0.339951762094006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr10-17787586-1	4.39619084447812	-1.08477995490681	0.922862212694946	-1.17545169797236	0.239814050794656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0291817600356	1.03956264035389
Merged-chr4-58331008-1	1.39544388853655	0	1.48277094627963	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89500129-2	3.76178880736019	0	1.32158449487766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150472697-1	3.34372721973001	0	1.33239602908407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122411099-2	4.83416623933822	0	1.33759067777925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23517218-2	5.55199446890189	0	1.32169346974105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128793872-1	2.0652866199466	0	1.58203529443025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125386837-1	2.56461440157107	2.43771535384953	1.01298137126307	2.40647599551606	0.016107262529121	0.158253672715072	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	2.06205836083204
Merged-chr10-121449745-1	3.51221322894832	-2.67520971838284	1.22819435997698	-2.17816479668004	0.0293937699129742	0.252333852960222	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87675841867762	0.382164212378408
Merged-chr2-129903955-4	12.5302201603119	-2.41054956595285	0.685496221603823	-3.51650306738818	0.000437271606431446	0.00994914707307426	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08894171973194	0.843323834477631
Merged-chr8-84191506-1	5.89675506413894	2.76809218393638	0.725082593115708	3.81762327522136	0.000134743464711313	0.00401868847331149	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68064036339004	3.63403390308776
Merged-chr14-102903014-4	10.4906454441372	0	1.30492843564657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179073155-2	4.48993487698821	0	1.33496641612899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66467441-3	5.20746613271577	0	1.32554027058592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31891216-1	3.88624194879299	-0.518087089991676	0.897533663014384	-0.577234159944119	0.563781283848065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90089067167129	1.57597341069752
Merged-chrX-10904258-1	2.75581005146431	0	1.38382515266043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84544659-1	1.86074484975393	0	1.55480288270348	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122280817-2	5.21978853750526	0	1.30028493948037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164798746-1	2.69515972471226	0	1.36455578296716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33664667-1	1.81408505098352	0	1.54530660173926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105615371-2	3.89817631691201	-0.102885382234757	1.12319155093356	-0.0916009225222911	0.927015118466706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65547291857235	0.905469781553611
Merged-chr11-76463451-1	5.58779865584692	5.68169958374174	1.06548156131113	5.33251798064914	9.68601750174292e-08	1.20779560914999e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.12548978417018
Merged-chr5-25314134-1	1.98630446146807	0	1.48026373458551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99244307-1	3.1214297763281	0	1.4115718687888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108168146-1	6.43214572092133	0.421626603954025	0.782991471765703	0.538481732123118	0.59024451355666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28515561254703	2.15841814526637
Merged-chr10-121316541-4	10.1721049103068	4.3313036008472	0.997638912518051	4.34155439057098	1.41478245025615e-05	0.000668477035390012	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.6960750002622
Merged-chrX-7169038-4	8.4327966992784	0	1.29679107991355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128856455-7	16.8335227596532	0.855454040274211	0.391707361133736	2.1839110651335	0.0289687837772095	0.249504961737911	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64183597782657	4.49665822207698
Merged-chr2-155369719-4	7.2393644428581	0	1.30482877231324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94586510-4	17.7223897772276	0	1.30530351835891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15228216-2	8.88001429616141	1.29715972924033	0.641285191329316	2.02275016915868	0.0430989115884554	0.333334297154599	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96784760575978	2.98256857160297
Merged-chr6-125418948-4	6.69482177863542	0	1.29817548789701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191269619-8	70.5553293721365	0.658379666994469	0.316203637783102	2.08213818035224	0.0373298499787824	0.300413346885901	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86893917762903	4.68665058312119
Merged-chr1-171102600-14	57.2394516530896	0.505394345817578	0.242533599218277	2.08381167577004	0.0371773008738079	0.299443843572026	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57794034814311	6.12815711154532
Merged-chr12-52525070-3	5.31607732249228	0	1.30516070177406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63402365-4	7.64133650671472	0	1.31768689905056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37056888-4	9.50694790834243	0	1.29538345818338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16978475-4	12.5279818505166	0	1.28723217290962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91395856-5	13.8988356236205	-3.95933363520724	0.845488069567898	-4.68289710726578	2.82848511992075e-06	0.000184539654526382	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61690588775927	0.683637474991079
Merged-chr3-97876295-4	6.69508179788755	0	1.37148950298764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59542705-4	6.23628491565463	0	1.29897793931209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128746753-6	18.1939684783275	2.45645396105316	0.616542819135167	3.98423902576445	6.76967072803528e-05	0.00233317987022254	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47106903074355	3.18668873662471
Merged-chr15-59721181-4	9.9003498805135	0	1.29025085076491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97548690-6	17.4231243906319	-0.374794340658557	0.447615067009151	-0.837313951835528	0.402416118959952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65552611692945	3.05530521385416
Merged-chr7-55968528-9	30.6358706118561	-0.608585288978071	0.402609274898473	-1.51160275463485	0.130634950507199	0.752882184336163	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2982895200834	3.7732108197509
Merged-chr16-24603524-5	10.115911898927	0	1.2955902544634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17558166-3	7.6532654801453	-6.29655168991745	1.02260153103782	-6.15738535373326	7.39557439165288e-10	1.97253552733449e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03294810639161	0
Merged-chr3-146445714-7	28.744706140203	-1.26976945781712	0.332917163773593	-3.81407027329071	0.000136696570108534	0.00406210735348442	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.83487147185562	4.59047755109538
Merged-chr16-33414410-3	6.17085460500131	0	1.32460013692111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59969893-4	6.05171512238389	0	1.29749828049832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56301445-6	20.2806156709573	5.17524939679121	0.7922833788367	6.53206861967742	6.48674210303419e-11	2.43238098734348e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	4.90812472792165
Merged-chr6-42310839-4	6.77095259832983	0	1.30313604134222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27233912-4	8.32479716893573	0	1.29268456579325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34860413-1	5.17646956793116	0	1.3044493380377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29544119-1	3.38240322523809	0	1.36907738712463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24467075-3	4.07045183500148	0	1.33423083247669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34158982-4	4.90804981326514	0	1.32628255863256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73681964-3	6.2875290351406	0	1.29574668915593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37913340-1	3.04748218929798	0	1.3471840677348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79883773-3	4.83420491687422	0	1.32077282529323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52618777-3	3.95244249018101	0	1.3373309861143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120862972-2	6.06738839175335	-2.72368834021022	0.926195953034876	-2.94072580568452	0.00327444243302713	0.0473598307278864	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42413768551157	0.73596151290311
Merged-chr13-37332866-2	5.01191332591545	0	1.31292012561721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83995524-2	6.32442024891214	0	1.33154791615606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150509296-8	28.9833858435849	1.19731206369183	0.366056487756	3.27083962104208	0.00107228702552207	0.0200370797740249	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72382725810043	5.03766004380793
Merged-chr19-40965516-5	13.0681835937404	-0.166849827032303	0.562889556986164	-0.296416632643985	0.766911924755826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34924992183864	3.39184591427084
Merged-chr5-62821032-4	8.052727017914	0	1.31830628164577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62653261-8	45.5659285837501	0.568284079258037	0.358102671628042	1.5869305768495	0.112528368804584	0.677659090213286	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55805862900957	4.9541217455901
Merged-chr2-68381322-4	6.59065342441974	0	1.30950812448874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39608888-6	12.51977617272	0	1.28334668262998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94431228-2	6.0452813761964	0	1.32762579982552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4548611-3	5.56755419800434	0	1.31030841889374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60020040-3	6.02964893471087	0	1.31109491474301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120085241-3	7.45954312546755	0	1.30709714428355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161999993-6	20.0033447103003	1.50018842241674	0.300442440739323	4.99326399667474	5.93673192480292e-07	5.32155945621635e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85511882267413	5.30742256733173
Merged-chr3-14881557-8	21.8598907216387	0.21921479017135	0.424251365719113	0.516709686484514	0.605358833194731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2338482327326	4.41937237991838
Merged-chr3-105839997-4	8.17803670671593	0	1.28656154113057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61052385-3	6.83952340805458	0	1.29362029613047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128488692-5	19.1721077776757	0.777702819584187	0.455274452277941	1.70820658987781	0.0875980161981851	0.560589556996044	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1333644524868	3.87416838001646
Merged-chr8-14818371-2	5.10536475272075	-2.96488980614989	1.09227196875848	-2.71442451234915	0.00663910292883587	0.0809674694359296	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18151494196304	0.420961122473315
Merged-chr2-104450884-1	4.18485493024505	1.95652549010566	1.33856583792073	1.46165801836452	0.143834946935758	0.803748797884732	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr12-85362702-3	5.12985844144954	0	1.3158291600369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4601250-3	5.63299538261005	0	1.32394389324839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34236530-4	7.97334760464386	0	1.30315140782161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39925075-1	2.43716790500593	0	1.36344570892862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35030502-1	5.101814737696	0	1.35087188435212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63642463-2	6.81196953813993	0	1.32330194004024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146667480-1	2.65234895270042	-1.17485990703477	1.13162975337791	-1.03820167641212	0.299176172355011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67282496951298	1.88639437725876
Merged-chr3-137972348-1	4.5100904283144	-1.70846513310596	0.833892213625128	-2.04878412964051	0.0404832283124113	0.318911043221477	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88070044862784	1.38860239282551
Merged-chr2-69718942-2	2.26144442850992	0	2.06402115700274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46185422-1	3.09318422936585	0	1.34414604849375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124741147-1	3.61504388850259	0	1.33696744881177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102330969-3	4.5424563608352	0	1.33824029406332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121597803-2	4.34058070667292	0	1.38247346110226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97278281-8	24.3351541207005	-0.0247134430962508	0.481441915926379	-0.0513321384755164	0.959060859053614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98051808727923	2.87837514422973
Merged-chr3-100932431-4	7.18656936150126	0	1.30228911819857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125471472-3	5.97258666135751	0	1.31702097520674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131042942-5	25.218153010478	-2.7024432056759	0.533528459377111	-5.06522783963759	4.07912176803132e-07	3.98436907404745e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6872836298309	2.56757889007095
Merged-chr7-103861109-5	21.1820190490454	-2.55711049077212	0.453715475351717	-5.63593403727273	1.74112020267936e-08	2.84438101910714e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.59184937052587	2.50887834737526
Merged-chr9-85577525-8	25.08839015907	0.891246339591566	0.341197470785747	2.61211297240599	0.00899845133956009	0.102334284934719	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95945558058186	5.03098053642915
Merged-chr7-84188398-4	6.90888480516916	0	1.31013619949415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135608292-7	32.1887316970572	0.908197869744398	0.395709940911827	2.29511006888443	0.0217268171950702	0.199909968520003	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11366587291485	3.97722390599976
Merged-chr7-100242543-3	7.72874369057556	0	1.29588808359353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135175676-3	9.29024911013737	0.230989977122255	0.449119953193746	0.514316889017417	0.607030455620162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16110775303228	4.65383339486133
Merged-chr11-115376918-3	8.83834374671532	-0.250720041443626	0.504553915239563	-0.496914271935802	0.619249506714053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84135975301725	3.87845167313704
Merged-chr7-101366553-5	13.2672810090562	-1.75896233658995	0.6110840384049	-2.8784295220365	0.00399660571704878	0.0549583748287604	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83615024302969	1.90781241071831
Merged-chr12-116597134-7	48.0700757506424	0.327275398083011	0.36307849796113	0.901390195015205	0.367380892785395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73033027330924	4.0714204225784
Merged-chrX-49274688-4	11.416821430672	-1.84575487120445	0.524532971303861	-3.51885386082853	0.000433415382061588	0.0098785278947833	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96227020154965	2.66426113201814
Merged-chr12-3812808-2	5.82030163783442	0	1.32083300230029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146209184-4	7.87178973054292	0	1.31870707927457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6062471-4	12.3037654816726	0	1.30203293033195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102450633-8	45.2339384341325	1.78074719062317	0.302076697514215	5.89501674666374	3.74643383693148e-09	7.77188779390872e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8557388416845	6.70118053030255
Merged-chr7-80029828-5	19.1506078844894	0.407067492178204	0.455295122749011	0.894073913466029	0.371282345628782	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45249015014595	3.71264671366933
Merged-chr11-32556687-10	45.5337705111004	0.609374363278364	0.237854030756529	2.56196778057601	0.0104080973557992	0.114422531933387	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84182259689411	6.47688336172237
Merged-chr12-26464610-8	47.214701272252	-0.888022374812916	0.307106641733455	-2.891576586558	0.00383314154122574	0.0533277554083324	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.42278983174217	5.55441796519696
Merged-chr17-27591937-5	19.9826656257978	-0.468560566728334	0.440985191670718	-1.06253129487896	0.287994558693976	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07591834399874	3.37345151039306
Merged-chr14-122223893-4	9.02877153988403	2.42315753636778	1.19018785853812	2.03594543414691	0.041755834828509	0.325489297710097	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.851599296279844
Merged-chr12-25223766-4	7.1778727377513	0	1.31052329357808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79622702-3	6.58161329919275	-2.7459263744351	0.763890759246982	-3.59465845239696	0.000324817412087108	0.00795261094426533	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97868272101185	1.13404870833161
Merged-chr15-9128727-1	1.5686170422504	0	1.42380630841665	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71980649-3	7.75026047779448	0	1.29849972138563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110753977-3	8.40625179663717	-0.458811678901277	0.535640584193536	-0.856566310396489	0.391684611205281	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99962073184369	3.53698851098525
Merged-chr19-11293136-4	12.0058975286305	0.362397653189513	0.63033971068829	0.574924357524292	0.565342455863286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51582009174322	3.26953890093924
Merged-chr9-77806939-8	23.6577509399844	1.25754448970092	0.29640962298977	4.24258995715643	2.20954927521357e-05	0.000950528024608993	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23781225800073	5.45367686490715
Merged-chr4-124711127-7	20.2339942016414	-0.838251526811203	0.334901946450534	-2.50297597758219	0.0123153902813287	0.129958889911904	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8820775998968	4.03930997358261
Merged-chr4-85591242-7	20.0837423961475	0.205870265446733	0.422486269028892	0.487282736832933	0.626057979745762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54513695899678	3.66202020463309
Merged-chr15-67118526-7	23.316961467365	0.248632991284885	0.340877710762843	0.729390580359375	0.465762778144386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34156726243291	4.49769228751706
Merged-chr11-46850587-4	14.3232274036069	-1.1227134469666	0.497783979550116	-2.2554230210086	0.024106789100335	0.216742190499517	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9140790537703	3.26078074265067
Merged-chr2-58715057-4	7.15360244071273	0	1.33175056420264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120011740-6	19.4055657238646	-0.404539551562261	0.658701749823211	-0.614146769263685	0.539118345019833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5371408426448	1.66840304550736
Merged-chr18-45881734-1	4.50465419538644	0	1.34654856447617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44393578-8	27.2330289616441	-1.40572205424483	0.432551493543504	-3.24983747652567	0.00115470979487287	0.0212299372020864	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32687304526184	3.11388250438705
Merged-chr13-85556273-1	4.38300920782196	0.992281282576707	0.989228449387061	1.00308607500273	0.315819332745638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.803892645765084	1.4217268527323
Merged-chr9-88709657-4	9.57825471770376	0	1.29827325718431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90036040-2	4.57342169584458	0	1.31325139595417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86648623-1	3.53131048626381	0	1.3350366283423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124025014-6	17.3669965633248	-0.117355440802453	0.337364711776357	-0.347859265376426	0.727945878447695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52240551910922	4.42109121317987
Merged-chr14-45291822-3	7.32059155804848	0	1.29109113091518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45752276-3	6.28569469273017	0	1.30877552992496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34363902-4	6.42299569700826	0	1.30205390315848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95639281-16	85.6072229656422	-0.901728273807947	0.23625138793112	-3.81681683102259	0.000135184451330458	0.00402740397822788	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.83375348194134	5.936068458264
Merged-chr5-118650931-4	7.86779634761772	0	1.29742740034833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3355073-1	2.91812534593165	0	1.34142225580643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26466142-3	5.93510514015655	0	1.30158632028137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100441182-2	6.91474675589354	0	1.33387094165135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55879813-4	6.17041407267575	0	1.30858902601636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80057506-11	30.4972470868606	-0.503767644567881	0.314077678014986	-1.60395876507927	0.108723142095625	0.660833638115592	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11917388343507	4.71484677945639
Merged-chr12-3434810-4	9.57480223351804	0	1.32092093090461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121377177-7	32.7777086134931	0.501812740073226	0.39508546474325	1.27013718512609	0.20403576801118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68502897505186	4.1506333927554
Merged-chr6-50074268-7	22.5043070345543	0.704634158091588	0.34556090968265	2.03910262517453	0.0414397862704624	0.32408092252406	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30395176475716	4.98538498268007
Merged-chr18-35027321-7	22.587704555988	0.49568111602204	0.395690274806129	1.25269976944695	0.210314989923418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84092941255144	5.29953113141005
Merged-chr17-37286902-4	8.66748305240057	-1.24039016898673	1.17835988287112	-1.05264120666131	0.292505463956735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.958133199366859	0
Merged-chr13-83079414-8	28.6497360865891	1.67677113199835	0.359624393993781	4.6625622733127	3.12296542663033e-06	0.000199875904768448	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06517052809732	4.79792072247332
Merged-chr14-75231218-2	6.01374748547141	0	1.314304049271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77041767-4	6.95198322446888	0	1.31174765699433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42892161-1	1.77881903768636	0	1.99823170634115	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8425380-1	4.24008030746201	1.25216744328994	0.974502924455151	1.28492938488618	0.19881696137766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12000521415173	1.8460126076219
Merged-chr4-88351120-2	5.138674155911	0	1.32726765129844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170535447-1	1.52877281549168	0	1.39602941297216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117536020-2	3.7712271122065	0	1.32451259727515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122882463-1	2.80438450361083	2.07308629306137	1.1532335908479	1.79762912692923	0.0722357994275151	0.487183460562535	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	1.20275690226768
Merged-chr16-29848009-7	24.3078163305382	-0.145823546881137	0.374478832438215	-0.389403977607189	0.696977330087644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42643571177737	4.25626301352581
Merged-chr14-74849255-2	2.8384216185898	0	1.47598954727884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34489345-1	2.53998340700123	0	1.37815681792413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46699351-4	8.64290511923801	0	1.29707915410562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117405217-2	2.66973551400523	0	1.39744532454911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10979250-2	3.52992794630948	0	1.36483143756536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18609552-1	2.66939853737035	0	1.39527937300325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5605986-1	2.86016654401557	0	1.40261913698064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181553013-2	2.45898551037879	0	1.96598764363211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118864308-1	5.00932486632026	3.08677893171804	0.883818585478631	3.49254811160868	0.000478435399860797	0.0106375772845538	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974818030623421	3.44942824277054
Merged-chr9-110982828-6	25.8762731867889	-0.101026361459547	0.302893538402523	-0.333537526063994	0.738728567785899	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70043104685314	5.61411487628463
Merged-chr6-94274126-1	1.37308819751406	0	1.60657631259276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60599081-2	2.77869331396498	0	1.35097841611779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99455773-1	3.53093659008502	0	1.32368468946896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8641576-1	3.24043908764507	0	1.35215805796236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80968719-1	1.90148054892175	0	1.37563144042116	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64267487-1	1.74374522152916	0	1.50162373465565	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-21515899-4	8.92165279634975	0.113603098942875	1.29662242835971	0.0876146335726954	0.93018297099959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr10-96173136-4	7.430587599669	0	1.29256979268181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85146538-1	2.66514900375513	0	1.35734429105658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55589589-2	3.94785093005382	0	1.33064263008253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25027997-2	12.5425214296611	-1.48409532563458	0.449507638836817	-3.30160201387223	0.000961343691690102	0.0184818961097915	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50589766245892	3.99778390493607
Merged-chr6-97285075-1	5.11128774749585	2.61031686553432	0.897535239495256	2.90831685561703	0.00363379951220693	0.0509886757407503	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716345901999145	1.9263773140144
Merged-chr7-96849086-3	7.61249416057326	0	1.31954568556084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16057366-4	6.99647146461238	0	1.30838283215717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170240292-4	6.85237149887404	0	1.30417325365305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53914173-3	6.08479196360287	0	1.30713803360111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45843625-3	8.99810611584817	0	1.29793826641815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24156223-6	12.6718602156361	-0.241196703565728	0.514659692222195	-0.468652795645001	0.639317833090143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80274053532438	3.50708010092678
Merged-chr11-55386639-4	6.16196320222801	0	1.30134989856193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85570018-6	14.3634025278259	0	1.28094888857511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4381682-4	6.32139152218632	0	1.29285734601294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52931563-4	5.34005850335533	0	1.31938895855836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84626556-4	7.31600868196157	0	1.33770175070763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25116243-3	4.0373135310469	0	1.32485616760346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25207907-7	27.9509689348666	-0.590161396016889	0.52961710853086	-1.11431709155691	0.265143177174911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07325694808878	2.45607327397732
Merged-chr6-72395066-3	7.63703262677118	0	1.30491585130767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119395808-3	11.0957456920451	0	1.29695968379912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72105682-4	6.93026505070859	0	1.30120860460575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148956282-3	6.92795476459954	1.95008418021173	1.25750193324949	1.55076038346323	0.120959117810418	0.714342025525495	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr19-46609861-8	36.5743672296047	1.33195698422423	0.322117644425503	4.135001628364	3.54952118574594e-05	0.00138807307841864	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55275044683754	5.85968581975002
Merged-chr1-13427030-3	5.21932032708444	0	1.30042389036672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123283171-5	18.7917851281059	0.0827484549490552	0.441123914136817	0.187585511229823	0.851201584978139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0271215018159	4.84758385661402
Merged-chr3-87332125-8	45.9681669782252	0.630785717231455	0.295560050073827	2.13420493423889	0.0328260089811372	0.274583766369866	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75485881823647	5.4059116610185
Merged-chr7-98711689-3	5.93527679019581	0	1.30177179086526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25189290-3	6.42044349996934	0	1.31004265873144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95762407-3	5.07436289319912	0	1.32098940422695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70695232-6	25.4596010779748	-1.61213247410673	0.511942134808345	-3.1490521379145	0.00163800968396956	0.0277802701294252	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85415419987639	3.18961386801669
Merged-chr10-68844835-3	7.62610437261044	0	1.31701349110416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48594073-1	5.92119768525975	-1.97754177711134	0.984885861258805	-2.00788929448515	0.0446550570510355	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.714271778455	0.683637474991079
Merged-chr14-44980106-4	6.55911245859955	0	1.32146448268359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32501595-4	6.70846766230094	0	1.31633981116909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53149736-8	25.5710183389065	0.205152739813705	0.37485989331507	0.547278445819954	0.584187449606247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73572334334808	4.51549834572931
Merged-chr8-80916676-6	18.8028634966229	-1.07921993831862	0.439315750969219	-2.4565928627363	0.0140261546109624	0.142460372107159	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19204294393719	4.11340730250193
Merged-chr1-91428786-4	7.19184619400274	0	1.30902051387314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90140435-6	12.1869017981922	-0.639750706306284	0.539096000943579	-1.18671016885032	0.235341962588178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40063539514525	2.76670770598174
Merged-chr4-139043782-6	16.350523566257	0.523270939702415	0.39058795230768	1.33970066565242	0.180342681070104	0.945609117731688	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02609049139587	4.42119248490503
Merged-chr19-60611851-9	33.6911619128095	1.37278077049464	0.277440898845279	4.94801154483068	7.49754630600812e-07	6.37106191043442e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7005371908096	6.05604307037489
Merged-chr10-8879093-9	46.2821157426248	0.0660913372602958	0.330087623789037	0.20022361487426	0.841305699108216	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36902784098928	5.43655429784383
Merged-chr3-20255323-1	2.78389090188002	0	1.38263963812719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73939146-1	2.74749345102651	0	1.374620097211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40719205-3	6.33177836587583	0	1.30921654597181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102862712-1	4.9235890354463	-2.27190878283373	0.872807130465722	-2.60299063049755	0.00924144792591886	0.104371181501399	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87586430116902	1.20440436174322
Merged-chr5-65476053-3	8.58828341829762	0	1.36115474628573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32319240-1	4.41858752186053	1.40264332760336	0.817764521248802	1.71521665608749	0.0863055122204885	0.55509055133465	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23484466045373	2.77917504929676
Merged-chr13-111977918-3	6.28803779594352	0	1.31751313088671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21547206-3	6.46778360682159	0	1.29917797223738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32292184-2	3.41950120613894	0	1.3163517324355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-67424212-2	9.03374563977873	-0.821257200329289	0.80826154801495	-1.01607852352528	0.30959199521327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32158820572122	1.207189364431
Merged-chr3-9896551-6	25.7595257106517	-0.124063048846214	0.438179201270291	-0.283133130204611	0.777074785977533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57140303903638	4.7730869529346
Merged-chr1-155108617-4	15.5830880783158	2.19658063861415	0.98892497983491	2.22118025472553	0.0263387550097411	0.231576558966122	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.7821740460218
Merged-chrX-155152794-4	8.6708745007902	0	1.29576974519014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99578902-4	6.888362645352	0	1.29907568111644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84921919-4	9.85293773693375	0	1.28980282380731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39275204-5	11.7037769824671	0	1.29964723709923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178303570-4	6.93944014841717	0	1.29124522147638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21986379-2	5.00376675692986	0	1.31975280792633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38141936-8	23.8542709383382	-0.460321604590736	0.353887629167021	-1.3007564171549	0.193341844335352	0.993873203267612	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12574419456963	4.4774228283717
Merged-chr7-25187852-4	6.76140948470316	0	1.30106598481125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55196729-4	11.1712214490875	-1.81084473326098	0.77264922748537	-2.34368283671812	0.0190944008737658	0.180779878223283	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68903107384415	1.428339764855
Merged-chr9-48410802-4	10.4021686331603	-0.434495753187013	0.852631399192563	-0.509593892036439	0.61033600389561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53801272452425	1.07938469868934
Merged-chr1-180312402-5	11.2850280629203	0	1.28520857186524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121215199-4	8.63364258330989	0	1.30688084226667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115321922-2	3.47817722326516	0	1.40062527234245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27791706-2	2.17200507720806	0	1.58884737318417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5421800-2	4.76771264908866	0	1.3184218711773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93124237-1	2.25531901029199	0	1.48818758136517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123957373-3	9.70871666859581	-0.394184206706939	0.681400260447277	-0.578491423599095	0.562932386018984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04225086900786	1.36759862365701
Merged-chr4-107285696-6	48.4947174606919	-2.89415722332103	0.794546577484888	-3.6425268264101	0.000269974832129292	0.00685650034213786	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65206537374485	0.916190436775555
Merged-chr1-171276545-1	4.29399829862015	-0.357364655908606	0.753720776673505	-0.474134012181289	0.635404345766695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29228221267338	1.97634481356229
Merged-chr5-32163568-2	2.46084176683019	0	1.43424707600098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117092058-2	3.00630706150337	0	1.34738887832347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83852339-4	6.02494167709106	0	1.32215630269569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71836046-3	10.7634944386482	-0.064581352086219	0.563909897807645	-0.114524239310742	0.908822232616857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69827251314838	4.79564970874667
Merged-chr15-66103584-4	7.61005392207987	0	1.29639192210086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95684908-4	10.625503271379	0	1.29626481508351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51527047-3	18.5718968729803	0	1.29333187379543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127628742-1	3.49458384005404	0	1.37341688828545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3923883-1	2.89087619120369	0	1.37424434425216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28085175-8	26.6654497782475	0.0462542973961355	0.395237321548637	0.11702917430697	0.906836934572647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63403104798944	4.29167632810204
Merged-chr1-121462873-5	30.7316946760935	0.385031052771433	0.524706396301699	0.733802857150697	0.463068898972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19650421260707	2.37232581226066
Merged-chr11-29879805-5	13.3895622557764	-4.08733145415045	1.07301540452366	-3.80920109526752	0.000139416535441606	0.00411672522592281	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14034191453161	0.423054662900563
Merged-chr1-131050200-3	12.636816477468	-1.36635741648088	0.883199860102243	-1.54705347929144	0.121850350420391	0.717709812804967	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91349919742173	1.07938469868934
Merged-chr7-125594042-7	28.1471170628739	-1.38433306320502	0.443647483494324	-3.12034467614136	0.0018063953543326	0.0300101219599138	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46047534797627	3.22698849386928
Merged-chr18-50016962-3	9.66702331664263	0	1.29067091667271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76778932-5	22.3450406453402	-2.09476704959124	0.601545687301003	-3.48230748522191	0.000497112518332414	0.010944849940347	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99875032444156	0.887107926668329
Merged-chr10-39420041-4	6.98519982599929	0	1.32010119947489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35780515-7	21.1802030897208	-0.841181980759174	0.364462768557432	-2.30800524313808	0.0209988448720649	0.194546939429048	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95397407799339	4.03050332034478
Merged-chr8-40890255-8	37.4813484616363	-3.02417928920674	0.66187851469357	-4.56908514488772	4.89857761155359e-06	0.000284535513426294	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88303870577006	1.59660587240438
Merged-chr9-71129131-4	8.44654599635704	0	1.30581774694604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10794045-3	7.55659660430392	0	1.29700656669445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137955694-7	22.0062947013579	-0.273626385140388	0.401494967122107	-0.681518842195523	0.495543248404415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42798807401627	4.22657979456333
Merged-chr4-36285427-1	2.9131849293841	0	1.41468696792139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53929650-4	8.51273981585407	0	1.29031415049751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107082379-3	7.18241191676424	0	1.30389035195571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124279115-1	2.00913022917654	0	1.47290841466344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74903816-3	14.0124839774383	-1.70494066940587	0.609644113708645	-2.79661630624826	0.00516408204503917	0.0667957453117834	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57922094376207	3.62068529406414
Merged-chr13-44407572-1	2.66944982676999	0	1.3516941825148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128829997-3	6.33326338379566	-0.982961703139868	0.882767495935099	-1.11350010922031	0.26549370144345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25993381214533	1.29835464915396
Merged-chr10-13687396-3	5.0904849287543	0	1.34535829839619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44313819-3	4.26318172411414	0	1.34650637563383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37453308-8	20.440575707604	0.937137118963533	0.378680110999589	2.47474607654942	0.0133330934033826	0.137466759472616	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78350668338321	4.72330721970257
Merged-chr8-24987614-6	10.7177620296261	0	1.28863169597561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125306570-4	5.47524979662712	0	1.30778005023068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48602505-4	15.179218095091	0.587750681611012	0.417360967801786	1.40825502851083	0.159055566988605	0.864120808150762	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35201942617261	4.41350869845145
Merged-chr10-117905182-3	7.86391884373436	-1.26575140780893	0.540790536808508	-2.34055761271047	0.0192549673664356	0.182005697383122	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98065625867979	2.11774774311448
Merged-chr2-68888298-3	6.30466880313137	0	1.3082996696274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99240796-3	7.63409544998108	0	1.2996475047936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67461906-10	100.662281537382	0.67024871013087	0.252993829138991	2.64926900554023	0.00806660953117785	0.0936603884904669	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16094943111511	5.83973123217409
Merged-chrX-53752606-2	5.06641744449652	0	1.33793009130956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4600139-4	6.47991848804574	0	1.31509076510787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67056291-4	5.92684437364094	0	1.31699936861339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96416596-2	3.95349764840136	0	1.39292117970913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29512191-7	17.9535403288686	0	1.27966392070235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8901282-2	7.1503927622804	0	1.29408582209316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165062224-5	14.8500122458779	2.40391205247848	0.653664711178896	3.67759190815576	0.000235446251614253	0.00619382880756239	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30873796888861	3.3495736387588
Merged-chr9-83553741-8	42.4512001654304	0.0452757951382083	0.363809911585885	0.124449042470686	0.900959744845842	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51070710802897	4.57649232513333
Merged-chr11-74522784-3	8.78860875632427	0	1.29282891716072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21141439-3	6.4278069728094	0	1.30030702904818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30000768-2	6.03970885117899	-0.862146542582222	0.803120318802236	-1.07349611558579	0.28304858057561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90101122277615	1.46154891106775
Merged-chr1-152021045-4	7.44588000793715	0	1.29651869027029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113556725-4	6.56866596925637	0	1.33244153742908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31796392-6	54.0168230222744	-3.5287127596224	0.477030397803175	-7.3972492651891	1.39034419622322e-13	1.33607988009416e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.51907228232399	2.21849978611312
Merged-chr1-157427140-3	5.58732249740132	1.30476652422282	1.30715073408209	0.99817602530672	0.318194009826998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr12-69360833-4	9.60288584973575	0	1.28393312952406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28601929-1	7.54531839981216	-0.285412017864156	0.575782073499928	-0.495694518812059	0.620109954843136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0042229668177	2.37705875126183
Merged-chr8-117465465-3	6.84278659421089	0	1.31128215534203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92963749-2	6.58102928794919	0	1.34842417268852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11547296-4	12.3297316034018	1.18366473667719	0.8389296282192	1.41092255758062	0.158267450002697	0.861342948936139	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07966773360746	1.50871668602081
Merged-chr8-72216075-6	24.7410802222201	0.108570757098731	0.323297774791246	0.335822778764363	0.73700451177416	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87012678036593	4.95893128720505
Merged-chr5-20865492-3	5.57929549398728	0	1.3174220029437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106666864-4	6.61911835430411	0	1.30282208813438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70682927-4	5.04669667469947	0	1.30838931741655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21286593-4	8.58116311632802	-0.983771131469169	0.653877325040238	-1.50451941640373	0.132447677777824	0.76033877064278	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60241108673653	2.27643187026249
Merged-chr2-71744989-8	28.5761913686425	-0.556561630477169	0.366420544494218	-1.51891491577092	0.128783914036003	0.74522031322706	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69693485540083	5.06873996770532
Merged-chr8-128605746-6	31.829234706782	-2.71168653877691	0.718628307001948	-3.77342015664512	0.000161024768287779	0.00461903849600602	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78470534665799	0.666688015277142
Merged-chr2-164493647-9	43.8599762981572	-0.133472892574391	0.279662915267667	-0.477263467151671	0.633174522020664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11708222503359	5.96630027951923
Merged-chr12-73554344-3	5.77403752868857	0	1.3066159303968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111083515-4	7.76818371651073	1.91995905296045	0.914829742288268	2.09870641957709	0.0358427884311857	0.292273894279403	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	1.8131505516485
Merged-chr8-73350545-4	5.38519054190946	0	1.30930823581435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5706748-3	4.99253888792841	0	1.33983627408177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15683736-2	3.57350691138283	0	2.43817989692097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12289440-1	1.62747982444963	0	1.61746138844462	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62201343-2	2.53553544821726	0	1.35606086110868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24930955-1	2.75964808869875	0	1.34864485015356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71218025-1	6.26539480419194	1.68692893088719	0.630440189247627	2.67579535641657	0.00745521513682272	0.0881041025764056	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48361397159012	4.34257593450407
Merged-chr17-25333258-1	3.39767424489007	1.0564212934822	0.95573247740302	1.1053525107285	0.269006872756058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12203515284301	1.50871668602081
Merged-chr11-4294129-1	1.97586619962111	0	1.4241554515491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31164371-1	2.78648430772324	0	1.3535723079529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53832517-2	3.127607149326	0	1.37414160042662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25504920-4	6.89776825995074	0	1.29372641123614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35308752-1	2.99397777824441	3.08446177585612	1.14311479947713	2.69829572433754	0.00696954972958854	0.0838424515150392	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	2.15258675016244
Merged-chr1-74964666-2	3.55964226629221	0	1.33685948773693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3800125-2	3.15785563785488	0	1.38814338082235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146685484-1	3.37967342709779	0	1.33208769685637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93922735-1	3.0390044750799	0	1.34525384087465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50969659-1	3.21512564516646	-0.219497522610524	1.33801418056916	-0.164047231933786	0.869693961728158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.423054662900563
Merged-chr19-21276776-1	5.7148783316964	1.2829603385901	0.743950248423712	1.72452437687661	0.0846132221780182	0.547060019436507	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19371833471632	3.47561486258483
Merged-chr8-84554694-1	4.38631412912562	-0.809572163284385	0.795978742956969	-1.01707761727018	0.309116507151435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31418978210437	0.793480537552656
Merged-chr10-17478814-3	4.18366514291448	0	1.3653922512594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52046217-4	10.691677730265	0	1.30455543270638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65871674-1	1.72517069472095	0	1.40412234098601	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53381694-2	3.55985859067413	0	1.33939318625002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26431458-1	4.39726470927676	-2.2720997322094	0.915829571960921	-2.48091981496569	0.0131043848290881	0.135772812912889	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01808008358035	1.26514550294121
Merged-chr19-15518027-3	6.67371807404316	0.334054219006524	0.828946696115049	0.402986368812502	0.686958252351738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49544182079864	1.64143129445672
Merged-chr10-26995826-2	6.15162726483358	-0.56179648154873	0.735077741119782	-0.764268117672719	0.44470748076349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07407035289062	2.09295338928517
Merged-chr8-46882005-3	3.83889469803865	0	1.39233489942568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94159893-1	3.06062803974003	0	1.35848108250147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96379195-4	9.12354987814208	0	1.28843814680937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32395535-8	29.1959219090213	0.228286613389668	0.348770011978543	0.654547712100067	0.512758998572168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36928985776204	4.47925903867065
Merged-chr1-53838523-12	43.350044584909	0.130867873402185	0.286987742289869	0.456005097492993	0.648386312629007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50340486276295	4.60264637106535
Merged-chr10-13686821-4	13.4788444849924	-1.53182302884361	0.522916008475963	-2.92938637183456	0.00339631963193773	0.048691510019439	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64391436293993	2.60523628098419
Merged-chr12-79018119-5	19.0390449112234	1.65085741035145	0.493784512059389	3.34327499148636	0.00082795808334267	0.0163752266689195	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.381186667343	3.84874727172802
Merged-chr7-90021223-6	23.3210187797194	0.383227543243196	0.402309084280679	0.952569947378642	0.340808010010536	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47726063073322	3.89587575651099
Merged-chrX-76599081-4	16.3673246576613	0	1.29957450429599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151581798-4	8.21181930455237	0	1.29236006705059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84788455-4	7.63954658034872	0	1.29570665326915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77923959-6	31.3244410447633	1.89026363494797	0.405820510270398	4.65788097720465	3.19480822256364e-06	0.000203477522525968	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72157962063349	4.47529548398515
Merged-chr4-95230248-2	10.8203771179897	-0.949042232314564	0.566196969255091	-1.67616974983663	0.0937049476169821	0.59053365869219	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39647089411068	3.26868420987533
Merged-chr13-78163195-4	6.49293203430982	0	1.31798756566169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4621441-1	4.90472652079429	3.55065871682746	1.1865261789775	2.99248240766779	0.00276718615184947	0.0417241053343256	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.628416560482
Merged-chr15-30609311-8	25.4700900530568	-0.0336805201898647	0.403601554975565	-0.0834499267276207	0.933493791130129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55962435047931	4.47582439505366
Merged-chr2-58533564-2	5.23120979140153	0	1.31918908113387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90396377-4	8.12430996744994	0	1.29143125562684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36718667-5	14.8315104114958	0.100845121882488	0.402890656091904	0.250303948125031	0.802352303469854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59938214814254	3.53848638335771
Merged-chr6-125449916-5	15.2199824770539	0.179711490521886	0.679841426263835	0.264343247673971	0.791515438234531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7758246638424	1.64143129445672
Merged-chr18-68889690-3	12.6772206185524	0.000273674129401311	0.452321660697415	0.000605043165475084	0.999517245429102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39333834769778	2.86136436759119
Merged-chr4-99211856-3	12.5640601958678	0.367753489839456	0.594792970796816	0.618288224467068	0.536385362729932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4351129155971	2.72549481808021
Merged-chr10-117419049-6	14.7866336860427	-0.214743061151089	0.569532856857377	-0.377051224640522	0.706135537631559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32604721919607	2.66194126857047
Merged-chr10-77523290-4	9.06560163190012	0	1.2867058998047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108568076-7	30.1643494188726	1.52401389152668	0.347879271783052	4.38087007517107	1.18206342845836e-05	0.000578600125813032	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88607827537573	5.49081346430939
Merged-chr4-62729366-3	5.3444571125396	0	1.3460105377736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64317427-6	14.5289167967408	-0.144566452682269	0.481209470868526	-0.300423124302486	0.763854427208507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36294278709397	3.20695980746328
Merged-chr18-20816678-4	8.17535988824422	0	1.304795116371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78359733-2	3.35187395926645	0	1.37657048571723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-101552328-4	9.68786484335479	0	1.28967238055009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-76988129-3	7.02264292561748	0	1.33159776494837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97567796-5	12.1204987128067	0	1.28649975629361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107204332-6	23.7144955995856	0.765042685152067	0.48249587729078	1.58559424268616	0.112831383101501	0.678795761383784	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99364332661526	5.28733049184916
Merged-chr3-65318109-7	28.9858723907698	-0.534491940041634	0.368479029342213	-1.45053557320692	0.146909226651609	0.816553377360337	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62816940997194	5.06018597961955
Merged-chr4-148662274-5	20.4891863171123	-0.775166851014292	0.429903436011849	-1.80311852867565	0.0713696018270062	0.482736569815501	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89503956786481	3.85367715292105
Merged-chr8-48011829-3	4.69179197712924	0	1.31322788233959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36662863-3	8.47809393636174	0	1.29158628699305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64491238-5	14.2956503276603	-1.88921330153339	0.521606941950049	-3.62190981291485	0.000292436080576907	0.00731885412538435	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62487249559809	2.83260079823897
Merged-chr9-61971299-1	4.30829417842481	0	1.34584612699383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134731602-3	8.64889448891972	0	1.30986096126184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41682927-2	4.37140408112901	0	1.30109386949373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39416741-8	24.6193951681269	-2.43868740321968	0.819950160083039	-2.9741898007224	0.00293763306739965	0.0437770970176278	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03841320264114	0.683637474991079
Merged-chrX-21690415-3	6.66059473068457	0	1.37921930451448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41407817-1	2.73371516197959	0	1.36573452826827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93507150-3	4.08564059299896	0	1.33616920992206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31132268-8	45.3620015468596	0.0030194632892579	0.255148103337041	0.0118341592579636	0.990557927428005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.27678998591838	6.20794566408803
Merged-chr12-72490211-3	4.15511644435174	0	1.32287880023782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118484299-11	81.0458761929496	-0.111000222887604	0.215568261029723	-0.5149191367847	0.606609527652505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16160939507457	6.04431323113747
Merged-chr6-136904399-5	23.9485546063964	-1.48680444745652	0.415208162868267	-3.58086516696985	0.000342458355763955	0.0082729329817935	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64098290728236	3.14242356165217
Merged-chr2-43561399-4	6.47252909938555	0	1.32927275757537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117090208-3	6.48139143512888	0	1.31205227646673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115992241-8	27.4732178627034	0.436714040023002	0.38165095906305	1.14427601883965	0.252509185416158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32637334664978	4.79954570656801
Merged-chr8-35709205-3	23.0688352964546	-0.0342113543728209	0.469529094162597	-0.0728631192361716	0.941915042488024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35611067415251	2.67113643952962
Merged-chr13-110561287-4	6.38553391198625	0	1.30564808371361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62389525-3	14.7080581764191	0.378241436710286	0.558158029585526	0.677660118929327	0.497987218367435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50647991420966	2.9803946365064
Merged-chr2-170239192-1	3.06701169801197	0	1.37623921914101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157131199-2	5.8712367588357	0	1.3283724710917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45031347-3	4.74994726100155	0	1.33525474156302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55858635-1	2.8404656048638	0	1.38494882162352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83144321-2	2.16990668853805	0	1.50179664290088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86125941-3	5.57484450091955	0	1.32390060626339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97809539-2	5.54263121450845	0.871608878222573	1.27281579366776	0.684787918690839	0.493477760096948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.563523181795778
Merged-chr15-17597308-3	7.00304482658207	0	1.31005709645507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3721695-5	24.1492148745665	-2.18432028125628	0.393188146244973	-5.55540725761188	2.76965239173854e-08	4.21595927071026e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.04102237903815	3.83601891724767
Merged-chr11-51578616-3	5.30947847474912	0	1.37907688067993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27504666-3	5.81709640736835	0	1.313902308426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84117574-4	10.9645513004023	0	1.28771021947762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9470577-4	8.52147219190111	0	1.30765033198861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102605949-2	5.32445979272622	1.65885885902085	0.827029943889807	2.0058026571791	0.0448773070602777	0.343106332805163	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06380383609444	2.62400334963741
Merged-chr19-46484310-3	5.92138357959276	0	1.3017403461741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120527708-4	10.6248742476016	1.08272794765908	0.659108451762712	1.64271592142909	0.100441723060838	0.622896918964935	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55962646185528	2.00626573557989
Merged-chr2-128742665-7	18.5177464039445	0.0198802612101972	0.3432286252019	0.0579213379959287	0.953811286390796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30438931286985	4.30968593040033
Merged-chr2-146402958-4	11.9222417803237	0.137893474518046	0.485653536919823	0.283933841793086	0.776461081305751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66771560998292	4.52370257166227
Merged-chr5-64212442-6	22.2749334887802	0	1.2949020278481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95357918-3	5.7474797319853	0	1.32792208848402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51606451-4	8.8559215969468	0	1.29449710376817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16198952-4	8.16507903085876	0	1.3573894074204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63497354-4	7.68552760736479	0	1.29926613363356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134399578-3	7.56861767002375	-3.95378899763233	1.12535293335822	-3.5133768975335	0.000442449382204179	0.0100355075770615	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84184372021586	0
Merged-chr10-56428009-3	4.22682620490247	0	1.34392006839602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-68598122-3	13.6218633650705	0	1.28750115332595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32184243-4	8.3165872847389	0	1.3022173396646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76721906-2	8.25005792949357	-0.839561045192068	0.861395756593984	-0.974651939907096	0.329732940096381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88043959498204	0.666688015277142
Merged-chr17-5785437-3	8.9720972671714	0	1.31253002659099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74053296-3	6.82498360708268	0	1.30011758249777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32138550-1	4.17517298533269	3.22526867173588	1.09482345557824	2.94592580685297	0.00321989623518044	0.0467883787823218	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.82361065065357
Merged-chr18-39319605-11	39.2654138144182	-2.58720669105741	0.526409590220645	-4.914816787386	8.88655241923825e-07	7.32685552678487e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86574948404263	2.49065419848114
Merged-chr7-99089107-5	16.4509055891607	0.783074024978948	0.424727105865621	1.8437109715025	0.0652252732274434	0.451075320596943	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11467017659531	3.66109556476134
Merged-chr11-121801369-4	5.90332005312625	0	1.33043182079073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105283328-4	6.88823521910163	0	1.30521985737421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25972934-4	6.73451939515565	0	1.29649236385189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129585275-10	36.9589006687964	-0.343407505021273	0.352508779976784	-0.974181423350333	0.329966466666267	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30671489620638	4.41853758191728
Merged-chr8-46883442-4	6.01554182224876	0	1.29318679663593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5081079-1	3.42213156000041	0	1.33004361121844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77341906-1	2.09000330015888	0	1.42790118740194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-93728005-2	5.89500705954995	-2.45138995069456	0.761407543266403	-3.21955038713987	0.00128391794765716	0.0230808534271265	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67459159466285	1.15307255889252
Merged-chr11-84855491-2	2.95016464495017	0	1.35845649408806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30782600-4	7.74129252881363	0	1.29880114296201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43949136-5	14.634274909779	-1.07092162742695	0.546273043654838	-1.96041455800557	0.0499473556552295	0.370346068608491	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80919909130359	2.73671547441082
Merged-chr17-21370527-7	19.3651649184686	-0.608385242881775	0.376838646642685	-1.61444493101219	0.106430952549703	0.65083633027446	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20617416747718	3.67097192008757
Merged-chr11-34008704-7	17.75489647749	0	1.27747080039872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118181024-4	7.11130878977865	0	1.30387727851111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97662982-3	4.67113415079729	0	1.36551123680665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35287195-3	7.71391915963482	-1.49822920624943	0.879598663908272	-1.70331000685293	0.0885100688930439	0.565208537270091	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36451568430677	1.07938469868934
Merged-chr18-17641041-3	6.48479048329475	0	1.3282666374858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91065743-4	5.63198625668772	1.91275623415095	1.27681283615916	1.49807096230706	0.134114814511485	0.766177245164646	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr1-161329393-4	31.8882247979125	-2.00168042343613	0.451458913802912	-4.4338041895657	9.25847211602677e-06	0.000475258538015621	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39837963557665	3.26901647079835
Merged-chr14-105142196-3	6.83171442018627	0	1.28921439046792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-190826655-2	4.9253438526567	0	1.3978568408586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59206695-6	23.6882793822367	0	1.28869033373982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20455215-7	18.3229809991132	1.02822970431684	0.469929289668841	2.18805196211846	0.0286658175116949	0.247397844902034	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37920240314236	4.52107010669318
Merged-chr12-83703342-4	9.38455798359753	0	1.28621475675708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52156045-4	11.2107917204308	0	1.29002188465632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34051807-8	27.8018902778444	0.638712151405856	0.345587628082336	1.84819160034769	0.0645746301205087	0.447380595828537	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43863018846506	3.98617040736024
Merged-chr8-111726323-4	6.41395418855773	1.9047699705543	1.28868848262979	1.4780685916175	0.139389419860166	0.787118996731973	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr16-85285617-6	42.4138449287797	0.930805263120527	0.345978075781903	2.69035909578064	0.00713751694741061	0.0852509929529325	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88224529782678	4.71201406534693
Merged-chr7-31105272-7	30.2591710768331	0.741958730539201	0.385526518874857	1.92453357736473	0.0542877361344632	0.393422025667366	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52419846190939	4.06993874298922
Merged-chr8-25445289-4	8.09678755121121	0	1.31367982052386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193876603-4	9.7783404533354	0	1.306828551799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68483390-4	6.91983315789767	0	1.32179498980695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72843730-4	7.76920547234845	-0.366446648001136	1.02137570068272	-0.358777526972877	0.719761525788351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02670279274654	0.581381506691384
Merged-chr8-86827397-3	7.09649935702801	-1.43527905751593	0.704868901195372	-2.03623546886786	0.0417267162287137	0.325406637133705	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14625434360839	2.08355090189567
Merged-chrUn_JH584304-64262-1	2.30650616500382	0	2.43325261036738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100585221-3	9.88814485526449	0	1.29841245347043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155697111-1	4.50554726898593	0.383321836513468	1.05394158165816	0.363703115224271	0.716079716841735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90313952612728	0.843323834477631
Merged-chr11-109410207-1	2.13116161278671	0	1.38807773196703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70466909-2	4.38752808865843	0	1.34055215717368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62491694-4	19.8398447242564	0	1.28758994758616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44655339-1	3.10472918030515	0	1.3173174113921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105908451-2	2.38625976382413	0	1.54430062108879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23167358-1	1.61509949248287	0	1.53260605627419	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99173331-1	1.90849174357771	0	1.42200360048227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62068725-2	4.25054265239037	0	1.33918529228958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13640830-2	2.72283673316415	0	1.56308205314485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113063349-3	8.97186977621713	-2.70033174295953	0.961527474220549	-2.80837710347125	0.00497918830768441	0.064918204140851	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54483415248822	0.666688015277142
Merged-chr13-115903102-1	6.73259185736952	-0.925004665648707	0.946132789486408	-0.977668965633069	0.328238075694185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49350480958384	2.76500458315685
Merged-chr8-12762159-2	2.41314352471003	0	1.4586310386697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8569288-1	3.30065378655392	0	1.3677878479784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3358105-1	2.17799282926909	0	1.98474103707662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53113996-1	2.1498170694954	0	1.40260426429629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-44180615-1	3.69135522491014	0	1.33558035289227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23104085-3	6.57046726022444	0	1.30556217801142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108858254-2	5.28743915091559	-2.18743677490681	1.26897186965643	-1.72378665533307	0.0847463645486222	0.547296606969631	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	0
Merged-chr9-43284379-1	2.99536925296901	0	1.33176402756867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84241613-4	6.88319057265785	0	1.30193647330006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76279226-4	9.96171155725754	0	1.31840650155394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43602833-4	8.44169449265186	-1.5815222999636	0.751343112415348	-2.10492686208231	0.0352976750090128	0.289006624625855	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57173741340333	1.8268693516537
Merged-chr2-73470581-3	5.66417362414185	0	1.31750587895354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57520982-3	7.72895898622474	0	1.3058834337797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171171336-4	17.3490195041563	-2.77745139137614	0.940082507236557	-2.95447619756341	0.00313200312707428	0.0458434928158907	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02338113929881	0.803125334851723
Merged-chr4-129794101-5	16.839196039136	-1.09451246852729	0.63122173261422	-1.73395878496506	0.0829253962846481	0.53913470755314	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91659556729991	2.38713383244935
Merged-chr17-5397656-2	6.05563527631188	0	1.30681277842209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47235014-2	5.9291960798942	0	1.29839799895736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104408483-6	20.6898144430256	-1.72462119339348	0.511850136565354	-3.36938699472883	0.000753355751828751	0.0152128507289869	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98638796842806	2.57085801976395
Merged-chr13-28958565-3	10.1059618280206	0	1.29766921271115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130278355-4	9.65111692112193	0	1.29285425426735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9486341-8	31.9132133072066	-1.63959664620415	0.659804457054713	-2.48497358372375	0.0129561048387762	0.134655487366148	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26650065972279	1.46894927517136
Merged-chr1-131252847-6	27.4892288735956	2.76216122827944	0.63182768543354	4.37170021504223	1.23282724893323e-05	0.000596743180805856	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4082169826974	3.7057819243438
Merged-chr2-166261979-2	4.72887141561018	0	1.34780115399094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164081137-2	5.18984199795186	0	1.36158638707919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40293999-3	13.7700410450379	1.66063184054244	0.369235649408476	4.49748512420945	6.87619704049996e-06	0.0003760100182498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39249826547741	4.94653674507794
Merged-chrX-142718932-4	7.79387364589532	0	1.28871222372727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8760746-4	11.8458607328253	0	1.28887392655314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56989687-4	6.86611412795629	0	1.29064183524772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59164173-8	24.7335893681	0.270324413887441	0.379564145320562	0.712196916437241	0.476342846156214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78256062157538	4.21888842660124
Merged-chr5-119058516-9	25.1074476369895	-0.106126954570663	0.334250931440709	-0.31750683270568	0.750859055740485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23500233395067	4.14603106765202
Merged-chr17-26234678-2	6.35198432967725	0	1.30965697464038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52471775-4	9.7193859221949	0	1.28771202796901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74919762-4	9.80442947460205	0	1.29741505321098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26530705-11	49.8435478262317	-1.24113738144447	0.312603246203976	-3.97032787252189	7.17737932239509e-05	0.00244150457678932	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.34571283004154	5.09208504138044
Merged-chr10-81303964-3	5.61558746131854	0	1.31048874405433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101466937-6	32.886337159267	-2.52702532302543	0.354335426837936	-7.13173205845213	9.91136754207344e-13	6.74654399379512e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02191063432869	3.51096333144883
Merged-chr2-93346713-6	23.0006982494881	0.712714915353443	0.359092578938547	1.9847664840643	0.0471704580258771	0.355647070893158	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53566181100905	5.17775079202576
Merged-chr17-50331232-4	11.8863666904516	-3.20392129992337	0.666965317576601	-4.8037299923851	1.55736811100814e-06	0.000115121919210337	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55746667070476	0.898163539755574
Merged-chr4-138078114-2	4.28964868581108	-5.07225178211363	1.03198733171511	-4.91503299142617	8.87675098895442e-07	7.32685552678487e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87043579329086	0
Merged-chr2-147022215-8	22.1742772571214	0.927276072041559	0.34108751868764	2.7185869351342	0.00655614246432675	0.0802130098247324	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1510553072463	5.03193702889826
Merged-chr16-50630648-4	6.35022653182159	0	1.3074039312064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43742898-4	7.3395577150652	0	1.29010451690697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-33816723-3	11.2074381842183	1.40643156253705	0.656070901905984	2.14371885485419	0.0320554205104765	0.269777365755099	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00235898488633	3.48036551926041
Merged-chr9-78149977-3	5.986353000715	0	1.31836455603156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32249886-6	25.5602184294048	1.53433963288581	0.4695773042911	3.26749103686375	0.00108505302188007	0.02021781430504	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00655921710673	3.82913844569934
Merged-chr7-122919695-3	7.26945243679672	0	1.3325586396307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71729168-1	2.65091557161186	0	1.36543610190153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60284058-2	6.4553264343969	0.412361064970575	0.754079287804654	0.546840460465475	0.58448834331992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72924770395083	2.15897432561707
Merged-chr6-65614459-2	4.28018958149086	0	1.3180465892511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91244091-2	4.23871117566925	0	1.34094415507221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51785112-4	5.74360361281625	0	1.30176223501211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26465778-7	18.2026858612601	-0.0945230241435151	0.422717889099727	-0.2236078164206	0.823062481044299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52781923912024	4.30716623338341
Merged-chr2-118541036-7	26.0988126165559	-0.490933672725599	0.368409780244127	-1.33257502664637	0.182671305090389	0.954565302074095	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03497508949494	3.45498918340269
Merged-chr3-122888728-4	11.9901232633657	0	1.32692176970457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131502736-4	6.94025523361656	0	1.29638711996873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143056693-4	9.17302494511526	0	1.29291453723913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3649012-3	8.99669157731409	0	1.29512736760614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124857240-3	5.85123218490627	-0.831997887058509	0.656205634078441	-1.26789202020026	0.204836514181427	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42271516168117	1.80720849528393
Merged-chr17-64941758-4	9.07234331423996	0	1.28842427154193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93989418-4	6.17947309325656	0	1.31209330591204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25530561-4	14.1927858115489	0	1.30767074407973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83637389-6	20.7584085033435	-2.20631907355604	0.541057918562441	-4.0777872347162	4.5466343508797e-05	0.00169290238343353	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92273751242551	2.35287325867535
Merged-chr5-101826659-3	7.96254655163747	0	1.31799370664871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22928796-2	4.22341740658965	0	1.31229821795268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90690825-2	7.98411056816836	-3.20792180183633	0.603966659256554	-5.31142200098444	1.08773124528931e-07	1.33606928486232e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21935457272733	1.47711801254374
Merged-chr7-112405186-1	2.24991284100678	0	1.37796545871381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41505848-1	3.04640979169449	0	1.35658484185571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46176857-2	2.39510139744006	0	1.41896022709434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136909973-2	3.32962734017501	0	1.39119535891758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138966491-2	3.45282224388007	0	1.40039285242563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13775648-2	2.82137504259599	0	2.30739550111013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74121104-2	3.62738078340811	0	1.32639913272461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102514261-4	14.3270668309793	-0.274456686672841	0.457657566599798	-0.599698785080596	0.548706998082177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13170136216261	3.21021341497619
Merged-chr9-36916591-1	2.48502974399745	0	1.39854558560437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120062513-2	3.64216228699297	0	1.50819572218953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115367472-2	3.56202406538782	0	1.36503468559466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52675589-2	3.28338404558518	0	1.41567381784061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130842574-4	6.80300673398563	0	1.32404202632253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10129349-2	2.91772892091532	0	1.3836071649751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105281200-5	19.2635221017504	-2.78579779810966	0.521220375260664	-5.34475997166548	9.05369472761838e-08	1.13992819975135e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03534929555572	2.38371430436927
Merged-chr16-29989589-8	12.7512568285437	0	1.28653101520939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12158760-5	21.4271868887459	-2.43287458164935	0.426590798330012	-5.70306389911221	1.17672844275394e-08	2.04506640479253e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35849551158879	2.95895410867937
Merged-chr11-111101856-5	13.9781083521054	1.9112442241125	0.451093173629269	4.2369167521104	2.26610106462484e-05	0.000971020591271964	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40533337149953	4.36372709768528
Merged-chr8-115046632-4	6.5447100688767	0	1.30209507154965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64080409-4	6.40754604776467	0	1.29490565474137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26169342-4	10.0589249817083	0	1.28902960218912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65558402-2	4.53325527073279	0	1.31263707311235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123190906-7	20.1202990564519	1.05364425691929	0.319891398588344	3.29375613589156	0.000988582259664676	0.0188620076059706	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99925814364365	5.03536747013139
Merged-chr11-31814683-2	9.76323643089379	1.96365802062134	0.658959181731582	2.97993878082302	0.00288305995448484	0.0431409287350049	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6507673004724	3.84955131455601
Merged-chr11-86840149-4	9.73107019728138	0	1.29206990643563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101315995-4	7.0706782361256	0	1.29835719488055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40236016-2	5.99391371050873	0	1.30752539483411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55569914-3	6.81931102466852	0	1.29567740261004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129558802-6	22.6966469784258	-0.876164455634428	0.574754415238507	-1.52441535446203	0.127404986891885	0.739988601951157	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70599101780207	2.10356013656012
Merged-chr15-10890445-3	4.64463736770952	0	1.35782709364071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41020486-1	3.48392136228358	-3.2734004541951	1.11444901112332	-2.93723662682032	0.00331151320834641	0.0477885293604379	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27517139408358	0.727201944460961
Merged-chr3-138118564-7	18.1741460018525	0.320564039278297	0.404463170134713	0.792566698153327	0.428030317546139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66174541158459	4.01062454504911
Merged-chr3-19084549-3	5.48664028347053	0	1.34778628247878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4335983-3	5.86549815071713	0	1.38681606849425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80638039-3	4.52883245826455	0	1.37368064797819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41525724-7	32.5155614246164	-0.220710465835121	0.386851184431105	-0.570530671011626	0.568317825655127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89846026063893	3.48081565733068
Merged-chr9-73001764-3	6.91595309086514	0	1.32144317549517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102037219-7	21.5564387446089	-0.186854474754636	0.374507121764051	-0.498934369724373	0.61782562018485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45900207020559	3.47689767388641
Merged-chr15-59501682-3	11.3100630037416	0.412219443622426	0.455159961421919	0.905658402673763	0.365116686173877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08777369571601	3.37103649031183
Merged-chr15-78351713-6	22.3351560232716	0.561159780133636	0.424204858340591	1.3228509035205	0.185884965212096	0.967245669598083	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49331481178892	4.17207192012425
Merged-chr6-57542174-4	7.91944215992631	0	1.29514083945408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75642481-3	6.84024403650059	0	1.29946154641328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98534724-6	21.3011974944021	-2.63948606878626	1.03273159138093	-2.5558296955522	0.0105934952079296	0.11603126682155	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10645309391741	0.423054662900563
Merged-chr14-14800532-8	23.3298182231358	-0.00668538694624369	0.350628619175348	-0.0190668604347449	0.984787768163945	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65731517285031	4.68977829243394
Merged-chr8-57587536-4	7.97568641336569	0	1.31611766344008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43061379-4	12.1638194091656	0.48750983495479	0.422039441974774	1.15512861232512	0.248037762866634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35962468092163	4.61374305362014
Merged-chr18-4333834-3	4.50180094313675	0	1.32808120077801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-84454269-3	7.60718900490961	0	1.29743771689477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59011708-3	8.37003816838425	3.36467588342894	1.0798705105859	3.11581421146818	0.00183437804666311	0.0303620232617142	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr3-20199121-4	5.97031372098075	0	1.30139772431922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31917481-3	7.72792344867607	0	1.31012423625277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60570762-6	17.0610090329096	0	1.2825410769212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100608141-3	12.7436095776361	-0.315804277357746	0.665128680526526	-0.474801773857881	0.63492826854072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36794430371618	1.52944205045577
Merged-chrX-113172488-6	14.9146083456001	0.265193392993847	0.431953907419661	0.613939099609071	0.53925557152758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40318274262701	4.35822053828129
Merged-chr8-68083234-3	6.71598112682843	-3.40136966586418	0.999916328009178	-3.40165428905064	0.000669793083794885	0.0138157509007767	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48611745615923	0.563523181795778
Merged-chr6-29360385-4	9.81593350360618	0	1.29673454537675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31050434-4	7.71624668159032	0	1.31875472726923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69454653-8	44.2805929335182	-1.75010799186988	0.245366113413255	-7.13263933443933	9.84623192108425e-13	6.74654399379512e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.68092028953821	4.83036668793306
Merged-chr1-84177965-1	1.75719234630444	0	1.48440114175054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20749605-3	5.10431772069907	0	1.31857735637567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4570835-1	2.77989471434383	0	1.34494072785374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64601559-1	2.05537391335617	0	1.58839724659561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69576869-1	1.43073383521161	0.0858140948248725	1.50089998333453	0.0571750921298702	0.954405719296127	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr12-98215766-1	1.86978649318225	0	1.46854318181986	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111176752-2	11.5628102374698	0.142767102302578	0.47766026159124	0.298888381099519	0.765025212655185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14769709548612	4.2846932665951
Merged-chr2-124640678-2	2.86793334367898	0	1.38448224530055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-13127256-3	8.24308721179983	0	1.29309232256221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87960222-4	12.1025733738616	0	1.31796185796898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72107963-4	8.72856945835777	0	1.29707532655374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23653800-1	2.24668949432435	0	1.43611119821884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58710521-2	4.18008281478268	0	1.43678834131825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103341392-3	7.89517068790475	-0.676989180613635	0.498818973470385	-1.35718410208754	0.174722720875192	0.924413482172316	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13745600386437	2.86843309389115
Merged-chr2-6476914-2	4.17587719753663	0	1.39372531884732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49384466-1	3.9192341318123	-2.91356047441387	1.19192394597133	-2.44441810592164	0.0145086015611955	0.146128094577355	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1352526580457	0.306240821987646
Merged-chr9-55388302-2	5.43981038354003	0	1.30426006067165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126883746-2	4.72737498203729	0	1.31895327288798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128243861-1	5.52740035137381	-0.598241053802696	0.728868040984051	-0.820781019558773	0.411771011817767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61905529653981	1.48233004913473
Merged-chr6-49130562-1	1.67437282569787	0	1.73295240366331	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50048329-2	4.44679403221495	0	1.39963109921037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76780281-4	6.58789091419329	0	1.30316561668275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92098500-4	7.07631739654182	0	1.29536127361322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5989218-4	9.2655997520848	0	1.30553924414429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76196183-3	5.50103763974584	0	1.30499857678669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25052438-4	7.58591090103159	0	1.30175571631771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126655290-7	29.5914096729005	0.813387641872508	0.36611190214288	2.2216913383905	0.0263041723118584	0.231373326677978	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43782704374435	4.36955685628011
Merged-chr2-142694656-4	7.8811821882195	0	1.29984607232707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69365062-4	7.55783087040094	0	1.3023690503432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7293137-4	9.92074311979477	0	1.28879763737759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19927012-2	4.91834249192909	0	1.3341494627236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26687239-2	4.57136773695888	0	1.32725347983136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75463764-4	6.4264145920514	0	1.29627097661815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183917140-8	23.4373748492056	-0.507020224796777	0.604021146196208	-0.839408070379176	0.401240356637214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65147430510063	3.37731560219965
Merged-chr13-6241648-4	10.538003902366	0	1.29594368383948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27761428-2	5.76457319390366	0	1.30335582731089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136700837-4	7.17547458419985	0	1.29239601354558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32280568-4	8.94621931968648	1.92571571491585	0.880705260142827	2.18656093254575	0.0287745919537611	0.248061277811408	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	1.86737052669785
Merged-chr11-114903337-5	14.6472366799261	0	1.29304898118053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145884760-12	44.1566574405583	-0.508390795816411	0.266383966268148	-1.90848872377196	0.0563280792214306	0.404897708085575	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.93830873165692	5.53742798310796
Merged-chr16-10967123-2	3.96973163915303	0	1.33284736031716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62348332-6	10.7160595450837	0	1.30144646312619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52228960-4	13.0271870401302	-3.03611804617174	0.89099549991527	-3.40755710490172	0.000655471914300533	0.0135922458352788	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77686623327961	0.733321818366247
Merged-chr10-19082289-4	13.0921241848169	-2.92755906489958	0.532285081938563	-5.49998330638445	3.79827208215241e-08	5.47907036380423e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27706886652815	2.50724812564465
Merged-chr3-15590907-5	17.3799763320611	0.525552594288172	0.330702574560131	1.5892001898903	0.112015203629319	0.675283692590977	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66269691377643	5.22263920395218
Merged-chr7-97906102-3	13.5527616425765	2.25609898115712	0.801809286535603	2.81376010360905	0.00489657549564569	0.0640712099195962	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909380790589926	2.86487465827321
Merged-chr1-128832737-3	7.66591175327851	0	1.30256613724913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42537853-5	14.7506702878805	-2.05251096982714	0.588399829532884	-3.48829293757032	0.000486115175301595	0.0107661855085994	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77303351038026	2.37441905672497
Merged-chr15-25284538-4	8.42409793143021	0	1.32207904591434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79038036-2	7.61179338495547	0	1.30575332032518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80045135-4	7.16243482388273	0	1.30935111672276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121841100-3	4.61436578659026	0	1.3208346730695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27381597-8	33.2399907537103	1.78752524317089	0.278431773280834	6.41997578835206	1.36296020740276e-10	4.54408151596638e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62818180098305	5.72298144889424
Merged-chr17-78989182-8	39.7099750211517	-0.681475669307117	0.281244438749828	-2.42307251420286	0.015389854343012	0.152813466327072	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.21448148755242	5.57493966249863
Merged-chr4-89524855-7	23.6256384925254	0.256141266039413	0.400829816411262	0.639027476380662	0.52280505755054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97430288489056	4.51998704459193
Merged-chr10-111576139-3	10.4447786939017	0	1.30067770062923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-147479104-1	2.33748272403157	0	1.42897651315187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113146280-3	7.67676657208603	0	1.30165565130018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112386695-3	7.6352090351741	0	1.29917840367322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84424096-1	3.92943891692241	0	1.33366253922356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53119466-3	8.90874825162391	0	1.29379673261985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56924792-4	10.3147593085472	0	1.30883233779355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47224781-1	3.18091994136818	0	1.34104044376911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-24357594-2	3.86807463731163	0	1.32717124720212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-71874003-8	58.0399600835252	-0.284184823119868	0.339586664096686	-0.836855074611988	0.402674035512027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.67280950312309	6.42238631368596
Merged-chr4-141246756-4	16.3548435641388	0	1.29538213498768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116205679-4	6.44540527620074	0	1.31254968260188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90018661-2	11.5429013992061	1.43493720566542	0.568919507686698	2.5222148059223	0.0116618470996146	0.124640997803634	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15484971592668	3.08531610990261
Merged-chr6-98575492-2	5.03374182322478	0	1.33874896259352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82954332-4	6.49702437166956	0	1.28753100305541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125389498-6	31.1410109903653	0.295308857570813	0.426046897266992	0.693136974978957	0.488223595555851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14916738718552	3.35757099485896
Merged-chr13-42096270-3	6.32467929433184	0	1.30378054434446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67196460-5	18.6412428738818	0.404471848664932	0.416781395996548	0.970465218817691	0.331814653661683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5695946729554	5.00960433134719
Merged-chr8-69193561-6	14.3017923892848	-0.20741188424533	0.537833592897511	-0.38564323051657	0.69976091186261	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33362631624815	2.46976107568881
Merged-chr6-124907964-3	6.54766042120697	0	1.3591726614221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113119676-4	7.66569457561598	0	1.29238519689363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54721228-3	7.56376617726669	-0.726005903326953	0.591472130282515	-1.22745581094443	0.219651320686382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56443819361314	2.3396475694937
Merged-chr11-103260125-2	2.76204500674846	0	1.36390792168684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-22930668-3	6.82363225313534	0	1.31358301504315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146177961-4	12.7877151865218	0	1.28674015597077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140847961-2	2.45099463130638	0	1.40434726542296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69306745-2	3.46042698577751	0	1.45857136264974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112707182-4	7.44140574588354	0	1.29151879430139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44392727-2	9.63024589481729	0.497622176884675	0.462233708863145	1.07655968689208	0.281677022269683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50833134943517	3.90381326672608
Merged-chr6-145801067-1	2.03126094877855	0	1.36121704959616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40317025-4	11.0619382180793	0	1.29133730009198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122603351-1	2.96557819711783	0	1.36559402411022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117227485-1	2.78644751833622	0	1.35404721298723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108854668-1	5.93063518947959	0	1.32968325600248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24165769-3	7.05826995458757	0	1.3010255446731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108609107-4	8.66332280550759	0	1.29466573530507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52909946-3	14.1005806640119	1.06291531509277	0.384042538096157	2.76770203728484	0.00564530422979899	0.0713920303696813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13903225879232	5.25132011009087
Merged-chr18-57740356-6	26.2003416684999	1.54792597907741	0.527195170016455	2.93615356724361	0.00332309767628217	0.0479150796015743	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24606341132698	3.50516217208357
Merged-chr18-69662338-4	7.52548390949089	0	1.2988559140767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113872427-8	26.4188045426816	-0.169551331799925	0.263625786781062	-0.64315154397523	0.520125771643355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06107246193811	4.85760825825806
Merged-chr19-32108026-12	43.6368306193055	0.599960938923382	0.277935740134118	2.15863184286364	0.0308787403116771	0.262363860587971	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88931888414316	5.46847591618297
Merged-chr5-123675385-7	25.8861990502097	-1.27999157577502	0.329785633873848	-3.88128361062765	0.000103906581175994	0.00326436512188773	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44064312473389	4.15720165345331
Merged-chr2-155299651-4	20.5844951479932	1.25323046988146	0.433967608799028	2.88784334238603	0.00387893008675717	0.0538452240850187	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50051528186404	5.83393905622649
Merged-chr10-14678470-3	5.02711635523381	0	1.30494978881594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96977438-3	7.11946191292982	0	1.29436461193281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141867682-7	29.4475774812221	1.57248995261452	0.387825449622053	4.05463322261846	5.02130269564146e-05	0.00182492795299993	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87007950458536	5.44229815196314
Merged-chr9-108284602-4	5.09829454426697	0	1.3316085324587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14244616-4	12.858479752982	0	1.29888291406237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-158308727-2	4.36439102232017	0	1.35191380056678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87549534-4	7.57486050939944	0	1.30937920024991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76536942-4	6.08739123913478	0	1.32792040152297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54640545-3	4.72117771880541	1.95244661108982	1.29644791975986	1.50599694853262	0.132067957010778	0.758891375204564	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr7-122705972-4	10.2011926927482	0	1.29132768558318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59943724-3	8.01186744599578	0	1.31362995939636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31076984-3	5.3381450483117	0	1.36630254704952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4584685-1	3.11224035795503	0	1.38076327515207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26466918-3	7.31050246369166	0	1.32392567944658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38476428-3	9.64206408741225	0	1.2943300501363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16371915-3	7.7246639627741	0	1.31184899222588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83676673-5	15.6888142452732	-1.36639552588341	0.347274240950131	-3.93462965218783	8.33250797523635e-05	0.00274443581728727	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60587367546709	4.16805735460733
Merged-chr14-46767530-7	39.4278854364281	0.120773779791794	0.327122824568204	0.369200100760971	0.711978580775553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.22237696798463	6.30538422335108
Merged-chr9-104581718-3	12.6071256304096	-0.570908224278297	0.52999031840311	-1.07720500630743	0.281388689210423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19014183141435	3.72023112727297
Merged-chr13-44538434-8	30.7958520812929	-0.195780432392765	0.418998577737816	-0.467257987962128	0.640315310281502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58930487458579	4.23360625785115
Merged-chr6-22391110-2	6.32442233388938	0	1.30948956537402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89095087-3	7.94243447262557	-1.37420133032959	0.885705311559614	-1.55153335132404	0.120773921231301	0.713687954876059	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44134793364249	1.41959898789419
Merged-chr16-78200280-4	6.63364353051104	0	1.2897859509438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28057157-4	6.27149525355207	0	1.29972836621807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134743841-2	6.58857410700915	3.10370914122751	1.12161364497067	2.76718204628178	0.00565431709032478	0.0714398694091962	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.42539729206526
Merged-chr13-112366021-7	25.5815435533264	0.876230515367971	0.340404917252557	2.57408301395914	0.0100506155243533	0.11141094521703	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17755609255425	4.98918947027181
Merged-chr12-69417838-1	6.62203552166045	1.23987429530832	0.750486567466716	1.65209392020638	0.098515406172491	0.613548858592225	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75366452355171	2.68431722122931
Merged-chr10-116996380-3	5.98951030763411	0	1.31296915523393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64852895-3	7.78718133878067	0	1.29573494352925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95603082-4	5.5659659714531	0	1.31011041070981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85284068-4	7.86562667846165	0	1.30584901904356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97557147-4	5.8232618030587	0	1.31914087327939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96546858-5	22.5022587541328	1.33159699791896	0.423905200265153	3.14126129400169	0.00168221876483413	0.0283461236221895	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71186795185756	6.04175131845771
Merged-chr14-122376848-4	11.0949705986227	0	1.28298556459215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91480988-2	4.23112179040528	0	1.32285333837262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52000234-4	13.6689113379342	0	1.30302512012923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38320773-2	4.2788297425926	0	1.32619937502435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34072226-6	22.099003031229	0.269745079365702	0.530555338302984	0.508420253066342	0.611158652332517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81390947009827	3.20308289405506
Merged-chr5-122274923-4	9.16845129079888	0	1.29795492397673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46152589-3	5.37440215433208	0	1.31890683861386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35452531-3	7.53430405580283	0	1.33132336906931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103924302-4	10.6464429598806	0	1.28191741426059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91411042-3	6.03906840817188	0	1.36303510337606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79982559-2	4.41900148852888	0	1.33082839873659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156471316-8	30.0100690466619	1.45167359582514	0.332137015915487	4.37070704637909	1.23844858566758e-05	0.000598134968802908	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43623847208661	4.75989933466086
Merged-chr2-29466609-4	6.39564908926092	0	1.29920749899671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41086906-3	5.88070313049217	0	1.30572694075414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-22081211-4	19.6935982207961	0.124508410095012	0.550776531437139	0.226059759245973	0.821154941921989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63238617861842	1.78805646911168
Merged-chrX-106131558-3	8.0866347867737	0.00641330005770846	0.63339717848693	0.0101252425421734	0.991921363339145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.542909262415	2.49632546760905
Merged-chr15-51951694-3	10.160805951019	0	1.29632970152492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63689217-1	2.16523468771839	0	1.48684499578733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11351823-3	8.25450645993901	0	1.30068388176718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135429125-1	2.08900332132863	0	1.5679914579007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24493894-2	3.63607237235123	0	1.50057295999176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105567916-1	2.43516651557631	0	1.45181171438059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104079581-1	2.84887585527932	0	1.38373339132913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119102378-2	1.9603000622659	0	1.6042460155982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92009306-1	3.75251152783443	-0.70976616986709	1.07346957753252	-0.661188900665971	0.508491178397877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84469648552313	1.10669213789164
Merged-chr14-93757968-1	2.5520358283646	-1.78368849542711	1.23369127560478	-1.44581430597595	0.148229292450859	0.822047979673585	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.919932168754152	0
Merged-chr4-66841699-1	4.80080163328859	1.06253475083391	1.0470027356621	1.01483474172776	0.310184609899171	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87952446539458	2.09713636225241
Merged-chr9-3015310-2	4.66624409738438	0	1.38073026034761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115069785-2	2.68762722576145	0	1.42654565498757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122010594-4	10.2779066152174	0	1.2981816600427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14175713-1	2.53758385780762	0	1.41801039178352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91308118-3	4.28591929728906	0	1.30926274171946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20307833-2	3.70847954932851	0	1.33732715129411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78215911-3	10.30997484629	0	1.32299059299806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120362899-2	4.63234231008899	2.42937782377144	0.963136297378453	2.52236140449065	0.0116569875875578	0.124609440683225	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	2.62235589016187
Merged-chr16-15569394-1	2.17874923680918	0	1.39919642098724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8223171-2	2.20351297709361	0	1.42586427384601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94225217-1	2.5253275114155	-0.708955435095662	1.05196673781155	-0.673933319004491	0.500353707946152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39767519800962	1.39303987690739
Merged-chr3-8631999-4	8.79299658429636	0	1.30789434244707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32089787-4	9.01913624132577	0	1.29106590366653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8913304-4	7.87707494816517	0	1.29717717200595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-13046315-4	6.63027090065351	0	1.30351206429317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18009345-4	7.27855407295958	0	1.30948740942547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70091970-3	8.03376462757802	0	1.30240119344895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70426710-8	24.672518595087	-0.689979542663209	0.332088962978364	-2.07769489378713	0.0377374696583685	0.302910292629376	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31868080309477	4.6258160331536
Merged-chr19-18624072-4	6.33214383508493	0	1.3005178718797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4136099-4	5.78237905630329	0	1.31438204971583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32487346-3	6.12189940087206	0	1.31582949213616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99581274-4	8.01179702419893	0	1.28814299874332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40459120-4	7.36121581104096	0	1.29322931648397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93014648-4	6.48513768988103	0	1.29760636266203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54844609-3	7.40256928027159	0	1.2906503717678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69199901-9	26.5493191981262	0.513601325892961	0.385527153579845	1.33220532230706	0.182792728108538	0.954894364935688	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48146248128481	3.84836099264139
Merged-chr4-37412961-4	8.49078186559603	0	1.29032820497233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58282732-4	6.70790932763203	0	1.30844707113117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104035445-4	6.13166692150012	2.81893027357207	1.15503913900553	2.44054956960083	0.0146649331933145	0.147248728403554	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr17-81703938-2	4.81022084958971	0	1.32557407490596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17624357-6	16.9315080409187	-0.12224806578836	0.455457231098926	-0.268407344183339	0.78838578701707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50691738806337	2.85160255630828
Merged-chr11-46096902-3	7.3881171198436	0	1.33624577710554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4079412-3	5.23219206366067	0	1.31151975615515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4777054-4	6.35084479794076	0	1.30160501188782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123661772-4	7.07433208723006	0	1.29367715441076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72183968-7	30.5958490948378	1.86616849893888	0.355851039460851	5.24424068499648	1.56927240126103e-07	1.80220868774698e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52081140625472	4.79300949514357
Merged-chr13-75824739-6	18.7549089474002	-0.318085379297603	0.599249557673338	-0.530806197892927	0.595553084679073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67441576550093	2.7458187106501
Merged-chr12-119313185-2	3.92957525299644	0	1.36417953251946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8067079-7	20.5295511410106	0.210035310882219	0.432721661374735	0.485382012573505	0.627405389361182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59176059081179	4.02519664859839
Merged-chr6-28621703-2	4.37361396326653	0	1.34283610677831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84646491-2	4.60182129807425	0	1.34464071305134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70008009-3	6.27746999973162	-1.84507392353099	0.828246082126515	-2.22768807887841	0.0259013225216334	0.228541889250337	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99780114015394	1.15307255889252
Merged-chr12-39039941-4	11.8310824061093	0	1.31545803889249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94828564-4	10.676150488408	0	1.29398294273301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10172482-2	4.89986537275063	0	1.37226840603204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96599092-2	3.50957380734086	0	1.34105852482274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177737693-4	9.90592066508551	0	1.2861480881511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118959875-7	45.0829445254613	-0.235271221441305	0.378732333324055	-0.621207118432109	0.534463356396056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88207656326466	3.58018435977799
Merged-chr4-88409479-6	20.3091032116589	0.159785829442616	0.452398614006949	0.353196991536674	0.723940763139115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68323266399766	3.830212281623
Merged-chr2-180045526-3	5.57161785201028	0	1.29367091942405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99065860-4	12.3029408886839	0	1.33761162260843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40722941-2	11.8173753913098	0.764378472188474	0.539235769211503	1.41752182594672	0.156330417726208	0.853764784070242	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42804479842387	3.20613844154895
Merged-chrX-12714034-4	7.75970119657432	0	1.30244784447573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24971492-8	24.5842449538991	-0.326574937327193	0.310482242619487	-1.05183128855272	0.29287696112138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88111421109192	4.53450481980477
Merged-chr2-170351783-4	6.11354930731263	0	1.32390278223949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43114124-3	3.72027696218712	0	1.41532135039066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128408718-3	10.4979370239198	0	1.31347876770867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127248749-4	6.40307784919771	0	1.30117034025678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186221841-1	2.65814340239468	0	1.45114284985721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4505024-3	3.83221728453787	0	1.35902770425263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36960310-3	4.17017744382935	0	1.3533998724845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47445569-3	7.66209016648202	-4.06258249325501	1.10703324564814	-3.66979267264596	0.000242747269627338	0.00634502523242722	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60969663238877	0
Merged-chr12-11277403-1	2.9006414841982	1.28511511599866	1.45258847955747	0.884706944936099	0.376314709006185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.469435083901436
Merged-chr1-36569057-2	4.63431322753291	0	1.34321291716743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128465806-2	6.35100184835496	-1.5434037451262	1.14807080137795	-1.34434543869051	0.178836708462084	0.939863563709456	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21281609879002	0.423054662900563
Merged-chr11-34770712-4	6.59189793520655	0	1.29189749905657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106561578-4	7.37801362840576	0	1.30987872930276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32745935-2	4.41640483399113	0	1.34681304540994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115149082-6	26.8166130677322	0.0891268483036598	0.472735663813237	0.188534217166385	0.850457895009718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6730413467017	3.13134338926628
Merged-chr14-102929747-2	4.56709093554872	0	1.30416550989301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81616599-4	8.0046476477561	0	1.31904989972556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36132117-8	22.2376216959545	0.0333119933563684	0.331920247907441	0.100361437924865	0.920057383227751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8574505920623	4.99718310193999
Merged-chr12-110817004-4	6.49873421953675	0	1.30339129725797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13596123-5	14.4030439269075	0	1.28893298406886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64941710-4	7.10981072965106	0	1.31518115401604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-16210143-4	10.9641378324255	0	1.30281315671848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20825165-5	18.566918040783	-0.121044772695848	0.467832779710136	-0.258735124911183	0.795839616360716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44107275255436	3.58322417156471
Merged-chr6-120903702-5	18.2343972075536	0.121877440235997	0.45586764573994	0.267352687506858	0.789197623805674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47658013511024	2.78249376271719
Merged-chr4-139285694-2	9.07477758100898	0.749333359678655	0.774703586351787	0.967251698430099	0.333418223502949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61934237337215	3.24517178646815
Merged-chr11-101964028-2	6.22594524467773	0	1.30465660781391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57611884-2	4.45413260848592	0	1.33185342973949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94348137-2	3.80020540712235	0	1.32681920995707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17676623-4	9.88391782431358	1.94880725032719	1.25982563381779	1.54688648810987	0.121890619808891	0.717767364335569	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr2-122153033-6	17.411833204542	1.13756407143539	0.450427889729806	2.52551872868657	0.0115527623479702	0.123778784782827	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79429000505307	3.56598171644645
Merged-chr15-33265884-2	3.93587223767235	0	1.34601128396822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95188223-2	2.64796442337542	0	1.4099649385357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87378488-1	3.00102134437994	0	1.36523384281945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19777077-4	9.41157125653351	0	1.29143273522738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60904712-2	5.63087690899754	-1.26174990364709	0.73530022857131	-1.71596560781529	0.0861683373197506	0.554420190777012	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79730972699458	1.35032549026822
Merged-chr1-132135818-1	4.19590002742606	0	1.31522188718244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13581516-1	4.04256542458568	2.743528327332	1.18975773052264	2.30595545374335	0.0211131215574438	0.195321865525819	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr11-117358416-4	7.63916090663038	0	1.31408184673587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32773979-4	8.19960521614606	0	1.29014985274058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139615422-3	8.81743125884445	-1.22361302057009	0.766188789982154	-1.5970124290106	0.110262936724792	0.667584718170875	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69288144767265	1.46402698790757
Merged-chr7-90039560-6	73.1372181245065	1.71592208970295	0.404292421973954	4.2442598387696	2.1931610780668e-05	0.000945345011921852	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68708427681045	3.87475754929496
Merged-chr15-25364226-3	8.20742659525985	0	1.29236406974757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95507396-5	20.0313477494425	-1.52296031438041	0.554953876148965	-2.74430070648179	0.00606399621200244	0.075420231532073	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68283471814529	2.48081072411233
Merged-chr3-61407111-4	10.4636964736194	0	1.29333727808202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65019042-7	15.8194599497318	-1.55525084177725	0.536740158123398	-2.89758613779685	0.00376046457689839	0.0525066919320517	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31654251216102	2.94640134381309
Merged-chr1-171457785-2	4.33318626264068	-2.131887110761	1.22096253036048	-1.74607087256934	0.0807986374034549	0.5289388659353	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09472666526504	0
Merged-chr5-31082544-5	17.8281237898346	-0.418708247331774	0.422972348366835	-0.989918723879883	0.322213846818944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4240158723785	3.94324599103455
Merged-chr4-101652920-3	12.07106833723	-0.112587919382856	0.545564266527354	-0.206369673181685	0.836502158241789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90588960572907	3.53689671782254
Merged-chr12-104243322-2	9.67871442931288	-4.42770535308194	0.930474682446122	-4.75854468328139	1.94993730438554e-06	0.000137603243080322	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02460172738723	0.986577844696341
Merged-chrX-160114913-2	4.86607895515278	0	1.33955330584958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46087065-6	20.953181289406	-0.346207340284827	0.430196335599039	-0.80476589788414	0.420954784182484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10183289524513	3.76097956172694
Merged-chr2-29130306-1	3.38024094769821	0	1.3776481171916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30530313-3	8.46338129210619	0	1.2986120141642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171466232-3	10.5531252731002	4.32711743334979	1.02426473077793	4.22460844674732	2.39356570086978e-05	0.00101696972879738	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.38225544844175
Merged-chr3-116483495-1	3.89111552075288	0	1.34270772564511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125518519-8	22.3110689336326	0.297790653757957	0.34984042046215	0.851218545200025	0.39464796284601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29623350902812	4.68609441433328
Merged-chr1-156467914-12	42.5666194292843	-0.825471799419341	0.2676649957041	-3.08397367107311	0.00204255671013693	0.0328994110871599	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92210175914592	5.06892202511722
Merged-chr5-90909162-7	17.2059262287431	-0.388793157053454	0.431766504861467	-0.900470862551505	0.367869724630659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26605548064375	3.7980416176449
Merged-chr5-117494424-12	36.2496668863304	1.24257364897506	0.281569815482028	4.41302149823078	1.01937869668902e-05	0.000512796923124256	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68665829533393	6.05856706747759
Merged-chr10-91141732-4	8.42005361284331	0	1.30132951122957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136554956-4	8.75398639857904	1.74756047625565	0.779369574353039	2.24227444047493	0.024943640616491	0.222430013608791	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	2.45226920948466
Merged-chr11-58239362-2	13.1180995460717	-1.48642218379102	0.459273043845136	-3.2364672904518	0.00121019095111576	0.0219914176561765	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65021477955607	3.07578631856332
Merged-chr4-32343411-4	11.2700788535509	0	1.33555667559999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93757691-4	12.7708971480364	0	1.28591872426312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80044420-4	11.1255079765844	3.34995466814898	1.06531775520311	3.1445591250005	0.00166337295430361	0.0280792480165135	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr8-122941211-3	7.22291590427598	0.00916471693468131	0.681172263904358	0.0134543307476303	0.98926532108501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21607959690002	1.99834080004871
Merged-chr1-62720958-4	7.55015427949335	0	1.28573373262772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75564763-5	16.7273964389547	1.69831355033938	0.38938147023948	4.36156746055449	1.29133967028373e-05	0.000620469721282062	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52373586829402	5.35572059606503
Merged-chr14-66847262-5	24.990647532049	-2.32714318719732	0.473062982267201	-4.91930942481327	8.6850081763029e-07	7.22049038535228e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.74196857774578	2.77563725447445
Merged-chr15-59525206-4	8.72122691736923	0	1.32343297718121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20982214-4	6.80419222457661	0	1.29002087527597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3276009-4	8.95952255569842	0	1.29389782350264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94707792-7	33.5981867491208	0.131719151499278	0.375774285982542	0.350527314967469	0.725942994481105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49527976141906	3.86214131438257
Merged-chr3-98033401-1	3.88089051150294	0	1.3918784967449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96588821-3	6.99932419797688	0	1.33142933309706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61499325-4	6.58367949573857	0	1.29187210991111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109196347-4	7.65667839652857	0	1.31090956932116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-54513621-3	4.93326658341306	0	1.3460604856937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24399731-2	6.04300002017166	0	1.32832838765182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9821414-2	3.22059162181049	0	1.3323238229128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42859487-2	4.81415885991848	0	1.36168041164685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83169922-6	21.7112827287488	0.683648951126821	0.404610928392413	1.6896452941671	0.0910958350323024	0.577936741361246	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68209783078652	5.33914170343859
Merged-chr12-21426759-5	28.516244340438	-1.31099761233465	0.36905914156657	-3.55226971690707	0.000381923156686124	0.00893240894660395	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41460307171823	4.02939695958018
Merged-chr18-80169200-6	15.1966511268459	-0.696708148666238	0.410241838340006	-1.69828643388832	0.0894537139059833	0.569731226988342	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36087985062786	3.39175518804656
Merged-chr2-35451816-4	8.79672671075515	0	1.29963857849191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99199742-2	3.85429454327804	0	1.33495544443723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67620222-4	6.31036315273564	0	1.31773657924274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28584094-4	6.73309534083147	0	1.28999586307471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128806816-7	36.0115011163367	1.61728338789607	0.351574690354814	4.60011323984639	4.222613306025e-06	0.000253380063448586	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1284098225917	4.66636422789945
Merged-chr1-127222411-5	10.5703712315684	0	1.28775429904078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79581280-1	2.92591962100453	-2.33816398060005	1.08154095304488	-2.1618820572789	0.0306272683589852	0.260851616948919	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97474652857668	0.73596151290311
Merged-chr14-69994977-2	2.781468689965	0	1.56014223696242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59465429-1	4.99054776530732	-1.83021749105193	0.842175943907718	-2.17320086650738	0.0297652026047853	0.25505336079364	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85751265481199	1.03295826569721
Merged-chrX-155702225-2	3.98916632761303	0	1.36765012297981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86723773-1	3.7985190014695	-0.573970537952779	0.740264806329224	-0.775358402892265	0.438127907751824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42441108181143	1.69023326152005
Merged-chr10-121263712-3	9.36812241384254	1.07314073238474	0.583074257623234	1.84048724215531	0.0656967355903568	0.453471942947867	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13874579988654	2.96635671870578
Merged-chr15-4000780-3	5.2161044631188	0	1.34974740218404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58530611-4	8.33586620236609	0	1.31976214290882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23858236-1	1.64309235665472	0	1.61760211550552	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168087147-1	1.25465064149059	0	1.77041808002637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110890076-2	5.9699411859018	0	1.3060657710217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17490455-1	1.54859947088635	0	1.67308625021749	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13496646-1	2.30061669771569	0	1.57366661665374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62936392-2	3.26786370453093	0	1.42384239757058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131423032-4	10.9982308038242	0	1.30561735340216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30197050-3	4.06732670889461	0	1.35997170335313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183553361-1	2.79013816505552	0	1.384183479552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100588650-2	4.34412962370421	0	1.33821362123423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100598050-1	3.37744104550443	0	1.33903771709516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9082012-1	4.73282174918031	0	1.32003232787885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34534444-1	3.41889210049666	0	1.34003193918736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136979942-2	3.28707845348498	1.92617520617597	1.28407529168461	1.50004849298904	0.13360184160387	0.7645302401087	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.729295484888209
Merged-chr13-96011357-8	41.1218693905656	-3.01781534672645	0.457420820021214	-6.59745952662692	4.18262820550477e-11	1.6976274702914e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.61730178531201	3.03726556645302
Merged-chr3-79128933-2	4.67566666185497	0	1.33143498893464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149875630-9	38.6209877191128	-1.84950004217716	0.397624117006015	-4.65137792974761	3.29724428789617e-06	0.000208780741508588	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.78306641180794	3.8649984047419
Merged-chr5-113841998-7	26.6277150139165	0.19871677082159	0.402830658258164	0.493301010605398	0.621799914413764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52200030840087	3.75083873268411
Merged-chr7-65705027-9	40.1492850756004	0.508552564052164	0.274928978374858	1.84975977089896	0.0643481814458915	0.446362456379224	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47614691420595	5.9446962103411
Merged-chr8-85515504-7	34.6412907123962	-0.785746836670345	0.45495493149715	-1.72708719539458	0.0841520048780485	0.544778770632153	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00830589040259	3.29818555030384
Merged-chr16-24637989-4	6.61088111520347	0	1.31572266761045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119965145-6	23.3760746037476	-0.62037391339789	0.434585182915807	-1.42750820273151	0.15343346250952	0.843251727598576	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77854269423527	4.17303644634375
Merged-chr8-123280760-12	57.2844509315913	-1.35811191260091	0.292021916778492	-4.65071912267148	3.3077957964657e-06	0.000209246102725893	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7340915443214	4.13522233010345
Merged-chr1-106395689-4	6.92179143932383	0	1.31137365033729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10965184-11	52.8098936071289	0.315298317384887	0.255396327711507	1.23454522705998	0.216999804634074	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09197860064193	5.43953989712027
Merged-chr4-62308591-4	7.33592007702254	0	1.30965263481684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24426388-4	10.754765531203	0	1.28527640905736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45899932-4	9.21646810191318	0	1.29221361699266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90292405-4	6.70734869464989	0	1.30200351944541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43260892-4	9.38013898101356	0	1.30072968765101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123034328-2	5.50464068966186	0	1.29256774761285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27302887-4	6.55585263607353	0	1.30024726967306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131394696-3	4.34792962726882	0	1.32356135993488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47909413-6	9.94486216497928	-0.607442920305967	0.60946387076695	-0.996684052069502	0.318917893096141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34189380562375	2.50442746498371
Merged-chr14-115017859-3	5.95514195928252	0	1.31654000047704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136322761-8	26.7541667688597	-1.15750085708527	0.392092629521326	-2.952110725719	0.00315609735013647	0.0460811233027442	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43653246913815	4.13892945504148
Merged-chr6-88030617-4	7.9205858087313	0	1.3064779039412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101506944-4	12.0410227516788	0.766418177778843	0.514813020562804	1.48873114541854	0.136558180059805	0.77602668355405	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29645216203085	3.8115029542486
Merged-chr13-59889928-2	7.88275623792488	2.18558972400682	0.761283420564841	2.8709277845368	0.00409269011389799	0.0559148919470579	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14855119822055	3.11413112565287
Merged-chr4-33497505-3	6.00399384696823	0	1.33820896944951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97511100-3	9.2110246130283	-0.654535835895887	0.608079445510254	-1.07639855405185	0.281749048770524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2664478635976	2.35712517876146
Merged-chr7-102032645-3	4.40797218705867	0	1.3347129514025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103655791-6	15.76794569781	-0.306861941354861	0.402554995829814	-0.762285761035721	0.445889470331928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9021272145652	3.74609606790233
Merged-chr4-8515627-4	7.83659622381753	0	1.30377255236487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116194153-3	9.95642297924154	-0.671378258888242	0.6508211762667	-1.03158637636757	0.302265925219696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01990751940233	2.50724812564465
Merged-chr4-149705583-7	25.733807224156	-1.47739109643283	0.319305473952321	-4.62688934876648	3.71198700803829e-06	0.000228617816236824	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60081152888576	4.05892347084693
Merged-chr7-129859825-2	4.03712299102361	0	1.44761440427813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122814384-4	5.17926665282187	0	1.33152171481324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85587935-4	11.7174705315871	-0.86829998504161	1.06737112470518	-0.813493980625943	0.41593489604281	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.954568666865771	0.61242769162773
Merged-chr7-67426292-5	18.5816626231394	-1.1756815119896	0.482908455565324	-2.43458464733915	0.0149088922891941	0.148897520331603	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2463165285967	3.25293273556824
Merged-chr12-32147042-4	15.3782576867641	-3.18040012305245	0.859571916636458	-3.69998142272666	0.000215615250015591	0.00579580178013937	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86308493853803	0.581381506691384
Merged-chr19-45581465-3	5.03691285818369	0	1.31765729244354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10093649-3	7.23162557217866	0	1.32124331328906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42108199-1	4.6673949818463	-2.6133643819947	0.725613099722387	-3.60159482097905	0.000316271025200873	0.00778713127836332	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28897075221874	1.40000983364339
Merged-chr13-8645911-3	6.89021028276776	0	1.33491648935636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145291578-5	11.3790041475563	-0.93468253140318	0.504808606685024	-1.85155823222003	0.0640892854655248	0.445008930359005	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69632500477999	2.39487633519123
Merged-chr7-101310881-8	53.8685341810982	0.555931384562027	0.348672856185716	1.59442117359981	0.110841733125872	0.670405765720403	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25544680982317	4.73313563957629
Merged-chr13-25854659-4	6.97054341784646	0	1.31382222606494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51405352-4	6.55215988089792	0	1.29936419548482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79288287-8	25.0892196740551	0.525797416938779	0.294677391214654	1.78431543312995	0.0743724238522172	0.497995738195203	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43194827308413	4.86956637276247
Merged-chr18-8678057-8	23.0825467798605	-0.104258770960142	0.423225907786387	-0.246343073621012	0.805416669131985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88608209691668	4.52584428201732
Merged-chr5-146677002-1	9.14291607857226	0.681978923429448	0.833776267133492	0.81793995621161	0.413391473556242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15383647884817	1.42690496303314
Merged-chr13-98027863-4	13.5469262195042	-2.75881705418158	0.546485223245909	-5.04829213458927	4.45777137251291e-07	4.25873579105597e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92428276632365	1.69486619385668
Merged-chr1-88573745-3	8.87453041240109	0	1.28560657877344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138582407-3	5.81439003272271	0	1.3432784806768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92934455-7	39.5190272185836	-0.237075392426044	0.32055288830068	-0.739582768019443	0.459553200832671	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42956989421614	4.20793767206139
Merged-chr3-65442433-3	8.54804299431879	0	1.33038681111596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57244317-1	3.07312199444061	0	1.35816188395001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102615302-3	10.0017583196054	-0.860694191435287	1.22149639637334	-0.704622783980953	0.481045015742392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	0
Merged-chr12-38761528-3	21.8510751883853	-1.23594131109273	0.78098092315461	-1.58254993745609	0.113524081728932	0.681770484758642	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02707638641031	1.15637648126681
Merged-chr6-29247989-3	5.5418530100723	0	1.31395604689238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36684899-3	7.45162262985232	0	1.34834518292048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36357390-4	10.1961839531343	0	1.31982135023457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51529869-4	9.78633815323373	0	1.29445885410962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35287733-6	13.0012250133111	0.314449423251319	0.479543931467368	0.655725998427563	0.512000437841912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78066718813836	3.43726270250954
Merged-chr4-141161641-4	8.29441347285901	0	1.31992842740174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131894561-5	19.5925112023931	1.53633931905388	0.504090229772705	3.04774666977104	0.00230564208640735	0.0361913254331911	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18490176082595	3.74636673277224
Merged-chr4-35164520-4	8.40436449487857	0	1.31024548993775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34267894-3	3.93654571787931	0	1.31733986354781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152463604-3	9.79456267411776	0.551835120519945	0.652375812349964	0.845885316520466	0.397616724566291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54823297819784	2.83134494660963
Merged-chr2-72373816-3	8.1742973154745	0	1.30508606590252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36854188-5	13.2405958812488	0	1.28808641675062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-61659312-3	7.50875330535466	0	1.30737211309756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72093402-1	1.94989026715854	0	1.4456879522998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14145270-2	10.2541719790315	-1.84316744048065	0.655960593655139	-2.80987525517374	0.00495607053330967	0.0647201009331842	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95356138305575	2.28429171194563
Merged-chr8-70701494-2	10.14516662021	0.689498050996934	0.653630269116088	1.05487472593543	0.291482622766284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03400524548891	2.51871067803438
Merged-chr10-22059595-4	18.3544548866699	0.0399453474147008	0.548608389353248	0.0728121337367665	0.941955615262175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76536966924521	2.37528155229931
Merged-chr11-94378155-2	3.59849728595324	-3.79199803114945	1.05335068646382	-3.59993882367844	0.000318292056378357	0.00782215596694249	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21299515316134	0.306240821987646
Merged-chr11-116146266-4	12.4247526658481	0	1.28742495586356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174393613-2	2.62508686426673	0	1.50158851496073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21962505-4	11.6213293388438	0	1.3006387318718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27876587-4	8.51980039805552	0	1.29963992724431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44833353-3	5.20780968310095	0	1.35322897705033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134729004-4	9.87962455086738	0	1.29380278626909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45538731-12	52.3616478850541	0.408150782822553	0.22190600464673	1.83929580216777	0.0658716901550501	0.454343620949114	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9309999019822	6.32735621281514
Merged-chr12-25299741-4	18.9276213037279	-4.49628352824264	0.755580861471053	-5.95076418358289	2.66893393576912e-09	5.68091716504134e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52153788170069	1.04220233489076
Merged-chr2-43545871-4	11.6389420111241	0	1.30887234499912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114742423-4	11.2689459537973	0	1.28868150036578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100893601-4	6.96915633159066	0	1.29338347271347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30717435-4	8.2981458667348	0	1.28522558123345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153496545-4	8.56032621874463	0	1.29739013784658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105483435-4	18.503182582598	-1.75183302917944	0.465388166279289	-3.76424059766085	0.000167055981834849	0.00475040913358576	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09677052343516	3.32450051613382
Merged-chr4-134087607-3	10.5998458360878	-0.63606816555857	0.596074656302976	-1.06709479900327	0.285929030190099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99053219482564	1.91160626283417
Merged-chr2-160070595-12	78.0335673392361	1.91868315658837	0.243662558107471	7.87434545336302	3.42531315478608e-15	5.20536077703839e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52918959252065	6.36974381439297
Merged-chr18-12655259-4	8.04907466152627	0	1.30084019536216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106090989-4	7.59782839234161	0	1.29779181703845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79380645-7	30.0277676184457	-0.0407862111927175	0.312324224644795	-0.130589329851386	0.896100183983648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00495387929439	5.03601922214011
Merged-chr19-34206340-3	7.22491364626014	0	1.30299601098202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118564166-3	9.18078215955994	-1.29052339811206	0.791722208239279	-1.63002046005767	0.103097172826017	0.636044925933623	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38973964674927	1.40646071772112
Merged-chrX-106044172-3	8.70223673356041	0	1.29723689860622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64128102-1	2.81698762629949	0	1.33785554335661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-116513439-4	7.22908612551605	0	1.31296007178341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45252591-3	8.08008651736116	0.863192281778333	0.756089415182751	1.14165370450226	0.253597991391531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4286925141354	3.21876556887267
Merged-chr16-58480373-3	8.87532076088263	0	1.30538905403936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101719481-4	12.3341888365388	0	1.2899526362153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30224724-4	11.319675726021	-1.49776448792582	0.533485231338543	-2.8075088117582	0.00499263139164538	0.065054534579952	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04534729395598	2.1639482234215
Merged-chr9-118867993-8	42.3766784064016	0.412106825605094	0.361598185028821	1.13968167614627	0.254418943866191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63057574557842	5.92523575448566
Merged-chr1-87638374-4	8.0949286175206	0	1.29582372711908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125541127-7	27.9947394797909	1.40689556462796	0.355497895047004	3.95753556977304	7.57270136288613e-05	0.00254419405274631	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35205338715104	4.70777968202803
Merged-chr9-111562816-9	36.250575972362	0.51555868422142	0.297065140035968	1.73550718256271	0.0826510104002593	0.537618248617892	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25915865889856	4.96733348751529
Merged-chr10-117323978-4	10.5401869690711	0	1.28931644572941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88231324-4	6.8373613989955	0	1.29650828350365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108203206-4	6.89641942456981	0	1.30206586873206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37127133-4	9.13419941724006	0	1.32405496709665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87499100-14	55.6463922262612	0.316563766109362	0.258353414915841	1.22531287698475	0.22045735848864	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.66677449967835	6.02672210449284
Merged-chr14-13995712-3	13.7432988637958	1.45395617989196	0.637914892777477	2.27923222416308	0.022653264499463	0.206601566222178	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59240668862696	3.04789201217784
Merged-chr5-32930942-6	18.5839433788682	-0.163070642138626	0.425422678961036	-0.383314407536702	0.701486657921226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01462474117865	3.88950066571865
Merged-chr10-7076351-4	7.27072129890257	0	1.29727794213419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70709366-3	12.6189639910474	-0.618046201110027	0.467314726665771	-1.32254809412857	0.185985705440357	0.967552098376367	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66624816730279	3.83877731428182
Merged-chr10-92112232-1	5.27233718053124	-2.16314537277379	1.02320796441863	-2.11408183672891	0.0345082782298035	0.284109606804176	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22409457221777	1.47934711566824
Merged-chr6-128107963-3	9.93147847314891	0.89827577207639	0.693936306560171	1.29446429533155	0.195505094515252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49432885103867	2.42775089836225
Merged-chr1-177188935-3	4.60760324264562	0	1.34423482956081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52954600-2	3.78094833847119	0	1.37141748500611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55282528-4	12.1305526902003	-2.17446512173432	1.10050767481475	-1.97587456361934	0.0481689857439448	0.361228702115015	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13755530490141	0
Merged-chr2-59522223-4	6.65666068391045	0	1.29998941962818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127043647-4	11.6889436307022	0	1.28465492598236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57339735-5	15.6489427370354	0.805447391542632	0.433340912925437	1.85869223864681	0.0630707742250241	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14169860447513	3.78702261309498
Merged-chr6-116228964-2	4.20286254043278	0	1.35653600675868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181888991-4	10.965877469239	0	1.29141977114015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143948169-3	8.99843545343717	0	1.32710838778763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78860719-6	23.3247574125938	-0.629690431485022	0.453912531629292	-1.38725059919537	0.165365361115399	0.887626489851067	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71820991100696	4.77900401633808
Merged-chr11-47398041-4	10.4245888427842	0	1.29883659075614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71328997-4	6.53373444708479	0	1.29591645997841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83095050-4	9.68414873637035	0	1.29810188650579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47638764-4	10.9799819142298	-5.03140780618977	1.07574238424013	-4.67714936206013	2.90890383142995e-06	0.000188389722268207	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67322690668343	0
Merged-chr17-51398163-4	6.2314538187053	0	1.31324651499506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56459068-4	10.4503433338811	0	1.28689587441493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59878239-1	3.24797199172264	0	1.37413949356977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32681072-3	5.73198606413978	0	1.31453256254148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118097605-1	3.88101109981225	3.1545901697808	1.30166313476948	2.42350734649904	0.0153714423531891	0.15270025418235	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.13132003301738
Merged-chr11-80148374-2	2.49311785934824	0	1.39041144452338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-92642156-1	2.70303934902504	3.35424956223681	1.44690196370831	2.31822863356969	0.0204368986463706	0.190455687789292	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.35032549026822
Merged-chr9-118666600-2	8.63876295344576	0	1.29302357137196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-97241621-4	6.02223593998232	0	1.31685932328978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151841937-2	4.08330015041537	0	1.34095902817034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64448171-3	8.16899797994095	0	1.2911911271473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37342526-1	2.64340481022903	0	1.37074730571435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166973422-1	4.15730104007074	0	1.37409765726021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9505566-1	2.25387474066472	0	1.48829903218051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146807216-1	6.13021512582435	2.35636922379313	0.749148555323458	3.14539647316776	0.00165861886010578	0.0280279565638666	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54111211595967	3.41780873583481
Merged-chr7-38214801-3	6.29129316925223	2.46893385833384	1.18451833293707	2.08433570817939	0.0371296414376487	0.299096837941888	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.992113827166316
Merged-chrX-17566570-2	3.7164998909688	0	1.38422771101006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60898908-3	9.23112604184731	-2.9447183116838	1.09099287551059	-2.69911781990845	0.00695235580056199	0.0837589679468148	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03233057837863	0
Merged-chr9-84537929-1	2.88169313035816	-0.893111130235454	1.44742901884433	-0.617032765412247	0.537213114180336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.667447567553467	0
Merged-chr3-135635786-1	2.1644403169636	0	1.40766862238943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80846548-1	2.02100045590479	0	1.40440654401477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76311836-1	2.29360915305809	0	1.38963483317028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57707398-3	7.85223309647662	0	1.32696904186715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160246103-2	6.56664703758536	-0.244232542530187	0.805156204301774	-0.303335602738084	0.761634116453448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9582335800751	0.793480537552656
Merged-chr16-45736042-1	3.57567958624614	0.481076422473185	0.750395547462848	0.641097117513218	0.521459586875179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53436087151589	3.58132906412137
Merged-chr5-3502310-2	6.77779617837466	0	1.30539657787783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55964186-4	10.4069006189791	0	1.30058100604518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119238410-5	10.3805592283294	0	1.28727699825058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42864706-4	12.6814055522057	-4.16661158740618	0.839907330113115	-4.9607991715527	7.02037453297998e-07	6.05215559672968e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80800435382514	1.11145969726662
Merged-chr17-10371581-2	5.33117209299352	0	1.30756639990126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105553031-4	5.79022641671776	0	1.31014375646521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4197210-4	7.76992191827188	0	1.28971763937743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13817938-2	4.42036991839549	0	1.39509318313421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75798573-6	30.7167065417044	-2.43249221083573	0.405576557923479	-5.99761540284749	2.00236061626944e-09	4.58254512598629e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07128772150148	3.6338439514538
Merged-chr8-61911011-3	9.68740691271051	0	1.28472992369635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71289144-15	87.8386489955071	1.24049329127112	0.252707890698794	4.90880315545699	9.16338956927067e-07	7.51640691668492e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86609180067697	6.2978205624585
Merged-chr6-28486597-4	6.67590813379436	0	1.30759627790593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97752445-3	6.76844961551908	0	1.29236704617218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11107448-1	5.18011792108152	0	1.34942026780173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86539600-3	7.15653645626394	0	1.31288497009528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121992826-5	20.1145109198465	-0.0275269231080933	0.563094097845506	-0.048885121000941	0.961010846406311	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98337294620202	2.3697525094638
Merged-chr1-144245057-4	10.8807002545567	0	1.28892892181251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122629767-4	11.6707191028413	-0.972536381919629	0.681172916946134	-1.42773788817052	0.153367316432398	0.843030001648003	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81819301574267	1.98376133073541
Merged-chr19-46648089-6	19.906047514851	-1.02670273489935	0.395611880608681	-2.59522725485313	0.00945283944965978	0.106189659047184	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43556306660661	3.36120575757701
Merged-chr4-141642277-5	17.9640446740094	0.476471940077675	0.488621137789315	0.975135750846542	0.32949292691328	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04079059299859	3.22624040516186
Merged-chr1-180215247-4	5.38768071432809	0	1.30477155650901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57259946-4	7.17657164516856	0.937327799309626	0.796699325442231	1.17651386084623	0.239389596864781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10774719913524	1.68807364458303
Merged-chr4-132805610-5	10.5257526091762	0	1.28898047475527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145829629-4	4.98155755357077	0	1.39025187263197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24069107-8	29.9986079169795	-1.25296596410394	0.350523584112514	-3.57455538199038	0.000350823551193317	0.00841899220575781	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27095704311839	3.98172759393652
Merged-chr19-32954411-3	5.62798481360953	0	1.30521311988305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125342361-3	7.85597618741193	0.047258018241738	0.73173191592014	0.0645837870585594	0.948505393809989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48518091843228	1.50690972966086
Merged-chr13-43512916-4	11.7112817908863	-0.0500394333265989	0.469952995263768	-0.106477528244103	0.915203483903375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00360682998987	3.51981813645997
Merged-chr4-133155432-1	4.86459100069816	-3.91899751843609	1.07008760951707	-3.66231464001787	0.000249946599481464	0.00647621351693724	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98068596985967	0.563523181795778
Merged-chr16-56646996-8	30.5294450472575	-0.679069154401624	0.289426176337486	-2.34626032446282	0.0189628577813442	0.179786338664856	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95904150234464	5.2459789015804
Merged-chr4-138066458-10	31.9450290506427	-0.620453785775451	0.297819424585899	-2.08332208900798	0.0372218746138169	0.29970250390856	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52691358493069	4.84749371050339
Merged-chr16-33837444-1	5.36418568006468	0	1.36035939470958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88167222-4	8.0178530722705	0	1.3093631240735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88745139-3	11.5632530254942	0.282886588153326	0.653333094468757	0.432989834049886	0.665022155263768	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99172995416123	1.57074540165941
Merged-chr17-88257338-4	7.36301307581026	0	1.30793137721957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100327946-2	3.8836862797128	0	1.32430215024665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54377267-7	26.7013455544047	1.45601714313987	0.347755370049508	4.18690052991153	2.8278968293036e-05	0.00115711801006683	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72222826343103	5.02170609241829
Merged-chr9-124014367-1	1.97543108665083	0	1.43649016385298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11822505-4	8.52648920484446	0	1.29548141035617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9638191-2	4.90057269017021	0	1.31973554725093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38071253-6	20.407927374926	-0.633565693396	0.371200400295626	-1.70680229033004	0.0878588065965298	0.561928313189472	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06314232029221	4.31919886341023
Merged-chr3-41905803-4	16.2797770129965	0	1.29589046873601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94785880-4	7.61797365816266	2.38926982634493	0.774798235216605	3.08373163198672	0.0020442190635334	0.0329108588447917	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06630003782976	3.00794942412004
Merged-chr10-78297784-2	5.56618096684734	0	1.30468576321813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153917380-4	5.8185122936508	0	1.32262726645605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24417886-7	19.8930959294243	1.1093119756742	0.375219099531633	2.95643792402597	0.00311214870252987	0.0456263886272795	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31398644580497	4.50449280904898
Merged-chr1-191599411-8	29.4785363523437	-1.06237383977556	0.372855277663533	-2.84929275088404	0.00438165422956895	0.0587692071603885	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73629830198191	2.99013578927945
Merged-chr16-17803136-4	14.0381494080715	0	1.30528408603647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45250090-4	10.1730724425041	0	1.29395933924109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38651664-2	4.72763914098328	0	1.32618968666029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138543695-3	4.74384416068091	0	1.30330570556937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45283293-5	16.7029083971863	-1.15040230178138	0.35346331954088	-3.25465822953188	0.00113528898252502	0.0209566649299662	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02807784264268	3.88563446973721
Merged-chr4-9135964-4	6.40753701565444	0	1.29706675215866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99632965-2	3.5431734856144	0	1.32433821931131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85290043-2	4.20400458814826	0	1.32390168155306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4446784-4	8.25515428951992	0	1.29164100644776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77708572-4	7.33166117230439	0	1.29722735634699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104375673-3	8.02482470488621	-2.02630410678836	0.969564304765859	-2.08991203247493	0.0366257025124813	0.296242499861443	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19060690236829	0.683637474991079
Merged-chr6-38710961-2	5.52781940434807	0	1.30173218602222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53448761-2	2.50360771710148	0	1.39638261462288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47215076-4	9.13772225864571	2.82802484988227	1.12573282299819	2.51216344776224	0.0119993498315665	0.127331847043447	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.07938469868934
Merged-chr13-97573759-4	7.1782610929591	0	1.30772677478094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61281280-3	7.64687558922431	0	1.32062451007072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20879724-7	20.6434563045959	-2.22893252170965	0.611806542241584	-3.64319824620234	0.00026927128491285	0.00684661532448059	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33161757289904	1.486851288245
Merged-chr7-35169566-4	11.7066046696616	0.230451133830313	0.606432254399248	0.380011340357558	0.703936997134411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91409375002953	2.10444551640901
Merged-chr4-108789513-7	23.3614881036312	0.37179440009146	0.372699723971724	0.997570902734738	0.318487476463448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54889098738372	4.29628963736663
Merged-chr11-70805514-4	12.112851418684	0	1.28700756524595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95784427-8	27.9542956339677	0.215621103738135	0.384289668151263	0.561090036001861	0.574736160348307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48914823028348	4.50600133944803
Merged-chr13-9099501-3	7.59566236581062	0	1.31107341840754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67457666-2	6.95624207374938	1.71720431828325	0.576918380049906	2.97651171754089	0.00291547940828645	0.0435164270018013	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61410676888533	4.02557463586334
Merged-chr19-6270036-4	6.2275931341093	0	1.30529041518916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12805902-3	7.443529550363	-0.641299298378585	0.760283343945937	-0.843500391643707	0.398948646811863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38121349853001	1.40343015234056
Merged-chr9-89872379-6	19.5427709568106	-3.82897439102908	0.733414148933305	-5.2207533718814	1.78196722299821e-07	2.00766258886278e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91484023523999	0.735627456805112
Merged-chr4-103123258-3	5.76850772289341	0	1.3094182141354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30219443-7	28.7880278417798	-0.138720323182701	0.339618239869273	-0.408459578720206	0.682936300565889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93391462010437	4.71349979787223
Merged-chr15-101248152-4	11.0667332198617	0	1.29798697879151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26833134-3	5.52656879172391	0	1.32149623190118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24946665-3	6.57820838647859	0	1.30562014568397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41449685-3	12.6921720493677	0	1.31966920904224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21590556-1	2.85766904394557	0	1.34356465031829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80530519-3	8.21416242674906	-2.23900517291141	0.980078482435316	-2.28451620256766	0.0223412114644497	0.204411762021273	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58655912539406	0.73596151290311
Merged-chr2-61514219-1	3.46264519283713	0	1.39734450212378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49225793-3	6.07029704556009	0	1.31264150979355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57706052-5	14.9041607979936	0	1.28105477185718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15297468-4	7.07097482341632	0	1.32563374042762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26237956-7	18.55485144739	0.0261141819689788	0.399218156377245	0.0654133123752567	0.947844925038546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99163929412416	4.05532083283065
Merged-chr12-29696865-8	24.1399228787404	-1.21820824547915	0.398918353217088	-3.05377838761961	0.00225978946504226	0.0355998559263866	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27442157859628	2.85135813824078
Merged-chr11-21377737-2	9.12416707285928	-0.242121769697622	0.583152452078799	-0.415194635355671	0.677999425695038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60006606514005	2.78734291970211
Merged-chr6-83005725-1	3.61380382817818	1.70178449544709	0.94636361375421	1.79823534074407	0.0721397213396179	0.486798623217699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892413352127638	1.99834080004871
Merged-chr5-92369273-4	9.43339649289482	0	1.32574427186504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69171339-4	8.75238212393677	0	1.2979182864744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151269901-4	8.81663147173557	0	1.30943029584692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50340792-4	16.5062108807741	3.00912054647964	0.670140271600872	4.49028460756621	7.11280695566716e-06	0.000384762817322041	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05171748957277	3.54238871291771
Merged-chr10-44400340-2	5.82336909408269	0	1.32133978457034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66094082-4	6.16483735026864	0	1.31981301354692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27767025-5	16.5471103533124	0	1.31686436016423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118537453-6	15.4873536231251	-2.71107889696528	0.600157491771954	-4.51727910445784	6.26393177834895e-06	0.000348359902968502	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51049869587251	1.37038362634479
Merged-chr4-105285859-2	10.2644706609262	-3.09444715502049	0.678240216688889	-4.56246485961466	5.0556557256786e-06	0.000291486789341473	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64588086064871	1.57597341069752
Merged-chr4-120061912-4	7.29496461428578	0	1.30296093807281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130731027-7	69.2166222194714	3.00869454967889	0.503350546840684	5.97733442143489	2.26818272616689e-09	4.97371370550677e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70018286776842	4.49315400026211
Merged-chr5-3462250-4	5.66687332191498	0	1.30122307833264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58322677-3	5.85283686230587	0	1.33334387677517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87552878-3	5.35093674196265	0	1.30892501311029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154765839-5	15.2572425440857	1.31465394693407	0.62158445140389	2.11500455644416	0.0344295589718213	0.283640186658174	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42640691731171	3.352542534727
Merged-chr17-34057847-3	12.0403468861191	4.07030381345216	1.05072599302832	3.87380139109441	0.000107150746894544	0.00334857613896264	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.90990595114556
Merged-chr10-127538057-3	7.85518620931611	0	1.31950042516882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-35931059-6	17.3784293788999	0	1.28766105322386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113663667-3	5.67315476615607	0	1.31924726565617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115731763-2	5.04442504477788	0	1.3215747221014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77838794-3	14.4734074285517	-0.3596860445195	0.552635296017469	-0.650856083770897	0.51513939271446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39669149998111	2.63470260453338
Merged-chr17-59021036-4	12.4769458221037	0	1.2850989827801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79229561-6	16.2277310307303	-0.731531053984033	0.462461126083264	-1.58182172019433	0.113690275120926	0.682580367332967	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14288638488023	3.20173594253295
Merged-chr19-32804921-5	18.6024579139256	0.944744173904569	0.550036992136007	1.71760115667086	0.0858693892160478	0.552884137127979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33189262613115	3.04238655551775
Merged-chr7-98334110-4	10.7990068706176	0	1.32608777638736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47020204-3	6.287582135954	-1.2452558432395	1.05155390358596	-1.1842054306422	0.236331752941257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37208325734966	0.992113827166316
Merged-chr4-130810307-4	8.73707520299756	0	1.29695114320769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126097700-4	10.4146234378672	0	1.30601063438529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46555865-8	25.973793759831	1.71991465367431	0.429306297244751	4.00626467562335	6.16865234196374e-05	0.00215906136013906	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91826487757823	4.91829498470592
Merged-chr18-5832784-6	19.1564028078979	0.546565856994299	0.35164697732654	1.55430273039645	0.1201122225487	0.711204539205088	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39742311618285	4.88562656040801
Merged-chr6-99485899-1	3.65747357299769	0	1.33644794475167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60116106-1	2.89897034884915	0	1.35596781111903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95990227-1	8.90544836552333	0	1.28519094576886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122247801-1	2.80385564701439	0	1.35219409036295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54405966-1	3.79418587100301	0	1.3263833363494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8117021-1	1.04512552373581	0	1.76117384987538	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32939461-1	4.13981107209142	-1.21785767787992	0.754551188054302	-1.61401598348855	0.106523959410646	0.651222252001881	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51926877825122	2.15258675016244
Merged-chr5-25011299-3	9.83934676406619	0	1.30487276862765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60933996-3	7.38434868929323	0	1.31706168847605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34340513-1	2.85850514792643	2.74784821763658	1.39708277635319	1.96684710752022	0.0492008398501251	0.366528871363085	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.576613669504516	2.21893062318232
Merged-chr8-26691596-1	5.65802347055155	2.06627135102768	0.994437055013745	2.0778302061553	0.0377250006530963	0.302847406962804	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18576110315854	2.98343639832043
Merged-chr10-7937838-2	5.1745584993216	0	1.33545748808603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55868140-3	6.1988529542243	0	1.32653088548668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74367786-2	7.87080216953503	0	1.29273073122955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84768689-1	4.66444383930718	-4.25128285355453	1.08129583235983	-3.93165563606815	8.43628526760903e-05	0.0027645909121756	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66141205895424	0.306240821987646
Merged-chr12-40576573-1	2.32241601213291	0	1.43443701589146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94173911-2	5.30720330000562	0	1.30576310089887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79227838-1	3.50514530712671	0	1.3357187951888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20740300-3	6.00422073712688	0	1.35585559470167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65544540-2	2.88002132254539	0	1.44552029582729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29176700-2	3.63144093368822	0	1.46224358334089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95613538-1	2.08721325778088	0	1.40996152203059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87460544-1	2.14542541687037	0	1.4489513921656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50695711-2	6.37140579329177	0	1.30625868134834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137831308-4	7.5355925452453	0	1.30720582079261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87766434-1	5.30388323402456	3.38981891559726	0.965635076774373	3.51045544753892	0.000447339764217755	0.0101148319143853	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903383975461927	3.02911050163644
Merged-chr4-124772372-5	16.1606635628165	-0.358141907002249	0.407485557334128	-0.878906995735757	0.379451705238285	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2131404428859	3.90152229813143
Merged-chr6-47781786-2	6.04172198744264	0	1.30024193683946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95075302-4	11.8536545426	0	1.30770587593377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4174945-3	6.04219479120848	-0.274261745019599	0.693954576225974	-0.395215702029307	0.692683705447534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89859248662024	2.4077129639533
Merged-chr2-158161858-4	7.42309599743489	0	1.33366647401795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145286932-4	7.43185769900343	0	1.3083212468949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75775904-4	8.10652797496913	2.45416194183663	1.18770944855476	2.06629823886889	0.0388003276176055	0.309012334978678	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr3-108346013-2	7.7860200150091	1.3848631182898	0.727139971076447	1.90453444092707	0.0568406156005671	0.407851857585885	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61460554641659	3.2618610394913
Merged-chr12-112627649-3	4.69087205966723	0	1.32189050907653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4940320-3	8.11525322773012	0	1.31157436198858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38982866-3	5.73618169847742	0	1.30941369851256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15277201-8	47.9940507698103	-1.12505430239265	0.281080422602985	-4.00260641411422	6.26484745121132e-05	0.00218921241468906	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5739111002259	5.29060474775079
Merged-chr4-16196838-4	7.98219338422227	0	1.31370758108415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79726332-4	5.43059526036818	0	1.30362145754377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51270649-4	6.30212719704314	0	1.29222541065125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35754967-3	5.71792450889163	0	1.32285670068865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132476401-4	7.89658973120171	0	1.30982335716094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105901699-6	13.076827181194	0.261445221065547	0.469760484774709	0.556550049523499	0.577834889791218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29570856704477	3.46929805182977
Merged-chr10-52309395-4	11.1052366466694	0	1.29782357952485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90740280-5	23.8559482338562	0	1.27830107013498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111289892-16	55.3213733285996	0.477058576561938	0.237113300215473	2.01194355663904	0.0442258872270282	0.339918234149305	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39748711420222	5.87036609829543
Merged-chr7-43920716-8	45.3641923175349	-0.374221530395045	0.378226295378751	-0.989411722472401	0.322461741454644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15761398583535	3.14498914632708
Merged-chr4-41737753-4	6.96433937471285	0	1.3034077140729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128259137-7	20.5997803859556	-0.0214871797477002	0.413080025716107	-0.0520169904377498	0.958515155329338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5494754633846	3.3788241922788
Merged-chr4-137913592-8	34.1306471183449	-0.581063843404001	0.312831993987681	-1.85743099993437	0.0632498594735977	0.440835966390471	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16288006395669	4.61078625022532
Merged-chr3-96251347-3	6.67467209465485	0	1.31207673704489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116892803-4	7.33101014463757	0	1.30696339495768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31259102-4	8.10423372100535	0	1.29986854645872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124657601-1	3.07578580038789	0	1.39858300948047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58701652-4	5.85196473795588	0	1.41818803473543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123585685-4	7.9306197313849	-1.31814934820883	0.581712794564476	-2.26597963896551	0.0234526299177793	0.212174381089188	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08522388207081	1.88787614081909
Merged-chr2-160620139-9	96.5448777719289	1.01324199159656	0.392983291291246	2.57833351710018	0.00992781257683512	0.110274152752995	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51733522640187	3.90410499049034
Merged-chr15-64191442-8	24.8672678428708	-0.0684456912829113	0.377002367155203	-0.18155241782536	0.855933993209179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13562677193604	3.9457474248028
Merged-chr4-53111939-3	4.88759247672351	0	1.38638239286599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103476916-3	8.50327076290695	0	1.34783603939924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100618709-1	3.78618187993371	0	1.32928809591874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86881694-3	11.8535014247831	0	1.29060723268167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152580620-3	5.21258437219161	0	1.33044002818028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83657612-3	5.99024923392553	0	1.32331585500797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51083828-3	6.86611134522228	0	1.30396985304785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25662938-1	4.14017031436702	0	1.32841366836106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99068679-2	6.31321910173304	0	1.33945656429736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91378945-2	9.57236827221266	-0.507265370638205	0.51314119479595	-0.988549303354837	0.322883700722194	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04104440736523	3.00089765976862
Merged-chr18-67249150-6	29.9984039703957	0.418081087277886	0.334280093598401	1.25069094835232	0.211047254151242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09630504318026	4.40676586175336
Merged-chr11-21425594-4	14.6066159554791	-1.12226896587974	0.475744782490087	-2.35897272484144	0.0183256026280356	0.175099404786023	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01134463723575	2.81951441047668
Merged-chr3-61389627-3	5.42701465657708	0	1.34735146926444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107357025-3	6.69007013552277	0	1.30073735037317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144617220-4	5.27286333691599	0	1.30663834618652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62654719-4	7.14762972033382	0	1.29308652665405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84254146-7	22.1215001877218	-0.908777511793514	0.630563028375822	-1.44121597825725	0.149523675688562	0.827629034479219	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83809618281126	1.87744667331019
Merged-chr1-172364685-5	20.9248330047348	-0.18701080843045	0.377617729349647	-0.495238422074435	0.620431832028243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91699377479689	3.89284835156696
Merged-chr16-57336822-6	60.2552738054565	-0.711505949968837	0.398490986635054	-1.78550073610686	0.0741801320468968	0.497319678745924	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97672351400093	3.24828232421423
Merged-chr1-152571520-4	6.47858153204113	0	1.3090276344479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122572056-6	18.2860026954482	-0.686194891355218	0.464290798117251	-1.47794204437782	0.139423291377439	0.787174217932447	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92536428550017	4.19407061032357
Merged-chr7-125503710-6	12.8325439003508	-4.05657341750349	1.02360727396789	-3.96301738046337	7.40083914751643e-05	0.00249672294751476	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85969501506427	0
Merged-chr2-71594707-5	19.0078930263073	-2.15538794106691	0.611848775958775	-3.52274618460974	0.000427100171663145	0.00976190549755155	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11702707684948	1.31711648651663
Merged-chr15-90624374-3	6.89026241723714	-2.47396307927332	0.841548006165791	-2.93977653223259	0.00328449037033736	0.0474736358637614	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97961463331222	0.958904680953568
Merged-chr13-111941355-2	2.90702840573442	0	1.33813000052743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21160853-3	11.8225928303589	-0.882862538268125	0.53191417858539	-1.65978380312416	0.0969579532557691	0.606124023098775	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8471885615002	2.60068404935219
Merged-chr7-101035885-2	2.91104571637642	0	1.48163415484899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31669318-4	5.30820398771629	0	1.34528107937906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77934374-2	3.80259629508568	0	1.35818445521618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129066040-2	5.11384949649247	0	1.31379390525192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68910972-2	2.66687224844514	0	1.41658377436362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-35126761-4	16.5426241427389	0	1.31471211207469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6292204-4	10.0231177543874	0	1.31589002953672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157407857-5	17.6474765265959	-2.01780249378801	0.781389239189235	-2.58232695382608	0.00981365636165384	0.109415319673884	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5421681531311	0.793480537552656
Merged-chr10-41870292-2	5.16505922806252	0	1.30463365691725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38962518-1	4.89994931716165	-3.04512416593634	1.07769221045536	-2.8255972683051	0.00471925572939751	0.0622663947340095	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61490595314558	0.420961122473315
Merged-chr8-79392812-4	9.83569178516229	0	1.29964248048396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125385501-3	11.6483252500058	-0.979330118258201	0.947706795183272	-1.03336825612695	0.301431595991519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92064522767464	1.0023426291647
Merged-chr11-57980561-9	51.096474494833	-0.892309384504065	0.331359288926332	-2.69287572228719	0.00708386687853958	0.0847340957431901	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12611914224324	5.12104885966166
Merged-chr16-93820471-4	7.69586014337942	-2.92848344055334	1.06646944514184	-2.7459609404598	0.00603339463324453	0.0751397380796641	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12271122630498	0.469435083901436
Merged-chr10-24142954-3	5.59169007939539	0	1.32087502276778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171240221-3	15.9628208639151	-0.172039071781929	0.400311895911084	-0.429762576478971	0.667368358332966	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43126904567759	4.16977463135203
Merged-chr14-45583827-7	24.5272859387622	0.456306575477623	0.405752339768485	1.12459382424753	0.260761191911468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59528026499687	4.35787699279435
Merged-chr13-35081322-4	8.22257484939934	0	1.31509020680185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112281936-6	19.6055337500872	-0.233268185727907	0.423069673470519	-0.551370614240356	0.581379640655928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57272275563634	3.44365980988792
Merged-chr7-143624769-4	8.45762703007586	0.426095723471882	0.815918663000555	0.522228186207811	0.601511463313816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45906646789715	1.41959898789419
Merged-chr17-28293483-2	3.49377834415537	0	1.31471889653035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76272042-1	7.18136123685399	-1.91973131511496	0.715902124130988	-2.68155555124977	0.00732807465013314	0.0869706440406103	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54846846522284	2.68099393481061
Merged-chr8-69007280-8	33.1153894204865	-1.63890920035251	0.332471842088739	-4.9294676808001	8.2453974059306e-07	6.92549792915092e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84729497797737	4.10160730298782
Merged-chr4-138207108-7	25.1360224220218	-0.163161493435494	0.371345212677441	-0.439379552678439	0.660386539872066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35185580307575	5.21725176129994
Merged-chr9-44587483-3	5.69139680339318	0	1.3272397168781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77497832-4	7.87213062112716	0	1.31449798484442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67036347-4	6.4448040135437	0	1.29630900022187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85506465-4	6.00159951686733	0	1.32413301198802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155755921-8	26.4807672267409	-0.269173786160874	0.317321561273436	-0.848268189153798	0.396288629258248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58537082323798	4.4593761803265
Merged-chr3-149085050-6	18.9791031442571	-1.13092475184818	0.429652655494847	-2.63218378237567	0.00848379570446159	0.0975601246369265	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72475874859327	3.6353187730282
Merged-chr8-126920614-2	5.97044370605866	0	1.30469097844358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103305834-2	5.75728507672807	0	1.30876618209644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16019510-4	9.96233225952906	0	1.29501107324904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62936051-3	4.38822497382245	0	1.34097735004779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152932237-3	7.22287960090831	0	1.36445810191293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47691542-1	9.23749053201346	-0.638626866667619	0.64454765318093	-0.99081404379631	0.32177639045445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27179811994259	1.8022285154312
Merged-chr11-78209810-1	3.97337505120357	0	1.37086407199574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146058433-4	6.61471616397808	0	1.29376805951524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8744548-1	2.76958180368755	0	1.40421974097831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122653897-3	5.18927211424696	0	1.32847412758723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81957217-5	12.0067946256891	-1.14564421791747	0.488292742520892	-2.34622413596175	0.0189646991769481	0.179786338664856	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88018203389093	3.63978970766697
Merged-chr3-37361167-4	8.34889699607002	0	1.30577754207475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38070780-3	9.41575263553773	-1.78207260379507	0.543883929818308	-3.27656785959901	0.00105077058758721	0.0197703001347903	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34857600807715	1.85925141407303
Merged-chr13-119358906-4	5.13770768795396	0	1.35101862147821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96500472-4	13.9939024797701	0	1.29213952645101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133614218-18	115.816733030962	-1.24489102492988	0.225908098030579	-5.51060823309385	3.57595841381017e-08	5.20433359707883e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.40772124005015	6.0763874528559
Merged-chr12-36119436-6	28.2990472759376	1.12521408882585	0.380981740991996	2.95345935974787	0.00314233981055887	0.0459203454764726	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10213527899409	5.16226046420191
Merged-chr16-29606824-3	8.97750018830029	0.0866731084629994	0.556230281227932	0.155822348024024	0.8761730546183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85073338267506	3.32107862856844
Merged-chr5-103746959-4	6.97457737379267	0	1.29699392890904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13796818-4	7.51428526490332	0	1.29274021335736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18087826-2	3.6728545878388	0	1.35414651354147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24387005-2	9.37457535698644	-1.30768998698291	0.651787233766241	-2.00631420690253	0.0448227352062609	0.342892350127409	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27496297241069	2.67883239311636
Merged-chr7-46987031-2	5.59906177685474	0	1.32228541461059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26638871-4	6.36484351422187	0	1.2964665497809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3624160-3	4.99086312708602	0	1.33229014427739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34388843-4	8.91632373198997	0	1.28940394622285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100703488-4	12.0509088496618	0	1.29594717372166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34267554-4	9.80877498927471	0	1.29045899378505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118647703-3	9.0357090213457	-0.380611832560176	0.733253909841186	-0.519072353317027	0.60371028681485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65930311380774	1.73515138435419
Merged-chr11-3910735-3	6.82982565633791	0	1.30397091058129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75082029-11	43.8862513555873	0.99059796571456	0.299271179454176	3.31003462318442	0.000932844315007892	0.0180615243284461	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12676379794162	5.0445079584614
Merged-chr3-41587770-4	12.7314993467818	1.25696523938863	0.70183054698366	1.79098109193285	0.073296329279407	0.49275945813705	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18112583825105	2.09927897987273
Merged-chr15-25485576-4	7.00381563874617	0	1.31038706840283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136687640-4	13.9299445336291	0.75219844631661	0.350899722017774	2.14362793447442	0.0320627106669722	0.269777365755099	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65241459516964	5.40645672875494
Merged-chr10-39520536-1	2.65993930066941	0	1.38879988468573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148478738-1	2.74260098397977	0	1.35381492845074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14843231-3	9.06822199484033	-0.256748676590769	0.676759287411781	-0.379379613056641	0.70440598745074	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46269558572111	1.52860153008918
Merged-chr1-14820018-1	3.29203573310443	0	1.41002438803933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70095863-1	1.37796106214287	0	1.50928197014218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13300400-1	2.84743053827045	0	1.37379780938625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96485629-1	1.57251938173118	0	1.57685002821625	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7733272-4	5.94363312886922	0	1.29200166701919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123022891-3	6.33087126638966	0	1.34209650239785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109439310-1	1.85154161096481	0	1.40811143740733	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-14486969-1	4.13472732397113	1.01628432664766	1.25204243515166	0.81170118369395	0.416963114980545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35013902240017	2.30127498244712
Merged-chr13-113446722-1	3.54666171867223	0	1.34855420631092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107781947-3	6.74818870727457	0	1.29834460243028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91345931-1	6.18276749348958	-2.63647711782569	1.07067943719851	-2.4624336904463	0.0137997687613413	0.141041006056752	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35306678603142	0.735627456805112
Merged-chr3-127323722-1	3.62101202884385	1.78032693373624	0.991878725331913	1.79490384083043	0.0726690218993481	0.489347681887346	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52716305545588	3.3639660552575
Merged-chr1-36875416-1	4.13224808330368	0	1.31987232805293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140538879-1	3.11941204129807	0	1.36227198665794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108123475-1	2.09142707508003	0	1.46495442251669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73502107-4	14.1306422282671	0	1.28807981321906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133183214-1	4.47638066220865	0.200758711149838	0.759977855817851	0.264163895846402	0.791653630102193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94189714690872	2.57663368784823
Merged-chr13-97441364-4	11.0979526975049	0	1.29177461907871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78113306-1	2.46327466725886	0	1.34626712791711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17924327-3	5.20844929466339	-2.50432603256774	1.14663386591504	-2.1840677368876	0.0289572710092386	0.249438680644569	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20700841817942	0
Merged-chr2-124577622-3	5.22257850164012	0	1.30958111040615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84190370-5	15.4692310552526	0.0476400204279837	0.402279873072146	0.118425065773648	0.905730865907624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00655577318193	5.08999219451151
Merged-chr15-36367507-4	9.83279241705886	0	1.299287273951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78407805-4	5.79784686638761	0	1.31971414959314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93192906-4	11.8036700161164	0	1.31537841666613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28007318-8	22.1432921142324	0.532438583171204	0.354694975310165	1.50111679114036	0.133325356561688	0.763498269203406	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37436069463033	4.88183777868583
Merged-chr17-83675599-2	4.6191595000521	0	1.31599680560331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101949179-4	8.4323131825595	0	1.29142916015835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154510447-2	3.99299699089232	0	1.34473079620323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116111762-4	18.5509456174167	-0.976558494878603	0.484089252201812	-2.01731083769546	0.0436630853359684	0.336780922375377	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01894192772728	2.83989899587789
Merged-chr12-78914617-2	5.41512645543264	-4.15481473414312	1.0701789279342	-3.88235520779997	0.000103449615109444	0.00325784026455022	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0569154736864	0.469435083901436
Merged-chr19-53453423-6	20.8365019229034	-0.232563556108321	0.418369155943221	-0.555881218308271	0.578292058483701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88709349759013	4.69256444236854
Merged-chr17-87155616-8	27.8196549971008	0.423296097070973	0.326597999708983	1.29607682058112	0.194949019881379	0.9996969829058	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2790071196177	5.82025588349175
Merged-chr4-75400964-3	13.2045024865706	0	1.29801198343007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21351867-3	5.64534227926451	0	1.29984551291024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24282669-4	7.10753208710585	0	1.30891277803768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46886106-4	8.72164796139976	0	1.2943148023143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112002779-4	6.83346748531104	0	1.31515409342921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66843450-7	23.0963712482959	-0.412107315618722	0.331453171869882	-1.24333495828033	0.213744427193119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57971106187198	4.23079833154593
Merged-chr8-69189730-8	24.8827266515064	0.57481060704297	0.327160182268198	1.75696994376826	0.0789229324077102	0.520319800092147	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42855491861493	4.91559978703883
Merged-chr4-131975317-4	7.71078698318326	0	1.31472191442697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6238846-2	8.05426079778877	-1.69227295722987	0.62541269415792	-2.70585002996847	0.00681298059365998	0.0824293704634892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64320108418161	1.9699838995169
Merged-chr19-28685657-2	5.39428377755503	0	1.35575856784532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87044597-4	7.68469095219913	0	1.29612055542649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70499870-5	10.8210608107606	0	1.28434366247929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34945281-6	32.9088512837632	0.587001157520244	0.411513306138048	1.42644514470044	0.153739890397252	0.844367698596304	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91337058125447	3.71282437240968
Merged-chr7-14534199-6	16.2150418478209	-1.09561695959291	0.533082076415455	-2.05525004134457	0.0398548599972241	0.315717745348358	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5750021025987	2.18069501644732
Merged-chr7-99401566-10	39.8940864900994	-0.726744931548679	0.316098044354532	-2.29911239417087	0.0214985578890954	0.198172487490595	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17654985974185	4.45961366865959
Merged-chr8-46804307-4	6.21346357414104	0	1.34213497805308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141528565-1	5.65246380305927	0.263171632694658	0.855598922529283	0.307587615838368	0.758396144775649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54295541133623	1.2972429702454
Merged-chr5-108664194-1	4.81030871852397	-1.2216581477063	0.790310856917518	-1.54579446430887	0.122154214387099	0.71899561280304	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26095153086812	2.89736933917373
Merged-chr14-62026730-4	9.58803397204104	0	1.29612003781347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64113425-6	18.0679217244543	-1.04855348177306	0.404922320620371	-2.5895176145553	0.00961105056322519	0.107689250703792	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62444603283302	3.58331936050178
Merged-chr10-121494159-7	18.6091510857403	1.63563179667564	0.540772902736378	3.02461863085066	0.00248946819132457	0.0384328904015174	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56573490396795	3.93147465031574
Merged-chr12-70471534-6	17.6490076074698	-0.886506101419287	0.450246133221699	-1.96893662378834	0.0489603692493452	0.365182546395127	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3613874753226	3.20820925061291
Merged-chr4-35219724-4	5.28581242758108	0	1.30663766199142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9457207-2	5.50496834985759	0	1.32385012845054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17779026-5	15.332684823603	0.295728071359488	0.597875862735986	0.494631226633207	0.620860455615064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01034356826117	2.61076849167644
Merged-chr2-164940620-4	5.06267762905573	0	1.31953530645142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77839063-3	6.24937902782443	0	1.34234229257293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162646462-1	9.41393500262282	0.949478001494074	0.551569311200347	1.72141194626616	0.0851760980038328	0.549123648397638	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75457328870601	3.07573628624387
Merged-chr3-9199098-1	2.65893464769058	0	1.38578393363682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23187359-4	8.44520228348184	0	1.31356062626196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149407661-3	11.9725192720416	0	1.29455996617287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80818563-3	4.62813877501425	0	1.36495104816612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9099305-2	3.93716935555695	0	1.36657456085003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9461485-2	6.53284376717592	0	1.29890708231614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143180944-2	4.67603537128086	0	1.36371419391557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65653195-2	4.85620701042089	0	1.30881167332696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10434289-3	5.49883570526018	0	1.34138232966822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173452040-5	14.3506324199162	-0.391951175493847	0.561796872431443	-0.697674185684751	0.48538097549056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76330714987848	3.11138837335333
Merged-chr5-143044106-4	15.3596820036863	0	1.32758231328927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89628252-4	8.63885647323298	0	1.31712805184737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30427588-4	5.05943021350862	0	1.30248334513964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87206522-5	14.4900908239405	-1.72483750529757	0.563528954108287	-3.06077885212998	0.00220762084341475	0.0349554775249457	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.795477906991	3.15813062208874
Merged-chr1-189792751-2	4.07076987331628	0	1.36920133637516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12591120-6	16.6743250023767	-2.72854186019659	0.660135775446262	-4.13330402878416	3.57585204167893e-05	0.00139449694613862	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37501588401162	1.46928333126936
Merged-chr8-43368740-5	16.973882490061	-0.886264608899089	0.503251738024555	-1.76107610155108	0.0782255233334983	0.516910208084819	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2434492776337	3.53129278194261
Merged-chr2-102682382-5	18.0034265754645	-0.44734581056227	0.489514117651361	-0.91385681113466	0.360792090032381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67827782899389	3.64850199812139
Merged-chr1-177110801-3	5.73972093042999	0	1.33882596955734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57585171-3	8.15875225843855	0	1.3084795771713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70580223-3	9.14963879486983	-1.64594416525685	0.73010148548054	-2.25440462454821	0.0241707246296616	0.21709403904151	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68143871644623	1.50288339618282
Merged-chr15-25365618-4	9.95453061318404	0	1.29920777219355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32881900-4	8.00074478509995	0	1.30892476976698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115585789-3	8.63224619935257	0	1.29874466067745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43921569-3	9.60970858937399	-0.260869285107277	0.574465800565827	-0.454107598485986	0.649751384521098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97996554328683	2.26292282237182
Merged-chr7-35269811-3	11.2127663227222	0.546976514634095	0.663231264372991	0.824714611653899	0.4095336341802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48569322222721	2.20653856906143
Merged-chr1-55667120-8	24.7320351657843	-0.786085513883167	0.329673541868565	-2.38443615895802	0.0171053156295695	0.165815747682814	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14663417629297	4.39076533441638
Merged-chr15-5263341-2	3.51941261015249	0	1.3580026793148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92022267-2	3.29573828501277	0	1.33677959035401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90881928-8	61.144758247459	0.845144423771341	0.276156593801892	3.06038111252787	0.00221055503305637	0.0349711306861816	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65427420607391	5.52659982687687
Merged-chr10-58408181-2	5.99527584199806	0	1.32682922767286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131501773-2	3.92470407965244	0	1.38673573775475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83152436-4	16.3914724008873	0	1.3408230066944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91801935-2	3.5036498730374	0	1.34438420933585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50132839-2	5.65565753219916	0	1.30749990979411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55049175-8	32.0832080814207	-0.27851612788806	0.384543795564491	-0.724276743249004	0.468895851958979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39562175410452	3.80130838068125
Merged-chr9-100876228-7	18.4430675959284	-0.241375107884892	0.537749467472309	-0.448861640011427	0.653531469609307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07149432374388	2.80950514011689
Merged-chr16-44123506-4	6.64003240691389	0	1.30678295907883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50479116-8	23.795053541934	-3.72632356711951	0.648087516761902	-5.74972279320806	8.93898889816183e-09	1.60916575355174e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23555698359866	1.31470332505763
Merged-chr17-64201820-4	7.13370760807387	0	1.31868190588707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103186817-2	4.99389819916521	0	1.32175477195078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-126817908-6	16.2332650744286	-1.65837767070204	0.776207917148339	-2.13651218193528	0.0326376891078105	0.273428385099672	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81182082969516	1.03956264035389
Merged-chr15-50871159-9	25.8878640506763	3.30949132720558	0.573718540984363	5.7684928946645	7.99835846885187e-09	1.47644274719094e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01421817408558	4.27736142671343
Merged-chr7-58686766-7	22.7399156347333	-0.75234005117836	0.563979178037299	-1.33398550952993	0.182208605518559	0.952452086730324	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94210409485878	2.46681435340383
Merged-chr2-124703558-4	10.3248838709651	0	1.31499627310496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55122641-4	9.40853254799004	0	1.29959966395124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148168577-5	15.2719413753404	-0.758115156628793	0.548446375316331	-1.38229586473523	0.166880875198272	0.893678201605618	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05088868410075	2.786034639139
Merged-chr14-57808747-4	8.90587552193213	0	1.29171067708625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40995022-7	23.283988157082	-0.515601391050289	0.371066992770722	-1.3895102531226	0.164677645301208	0.884879977785771	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45218278841171	4.98349326482752
Merged-chr18-82840555-4	5.74595347064331	0	1.2947789086498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78601293-4	13.8226541308191	-2.25473266370997	0.588462765330602	-3.83156385849365	0.000127331314740127	0.00383437423640937	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37699352449033	1.96353301543917
Merged-chr11-105567445-4	4.73593543312636	0	1.34407769355851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32032262-4	8.50918880452859	0	1.29738403673726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29434734-6	17.7694514754394	-1.54276647970127	0.558145685800616	-2.76409281474298	0.00570813001848375	0.0719712550461995	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97975170856518	1.7414873742332
Merged-chr11-118148602-6	18.9886336694452	0	1.2876144193264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142698482-6	13.5026690644151	0	1.29237539919954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137293301-2	4.17579097186358	0	1.30810107489052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80829716-2	9.27340950958391	0.364530551721611	0.535070410646524	0.68127585541714	0.495696957911658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66801933591379	4.07402043870955
Merged-chr14-63146439-1	3.06769839917348	0	1.40809829083687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78712835-4	8.8412205517889	0	1.30078484100454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-42018210-3	4.96829826126426	0	1.32975373414849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24789857-3	4.32554757185216	0	1.36759536094344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99158288-4	6.45032250402425	0	1.3092634856488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119365447-4	8.53423884246913	0	1.30403725109573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49039739-4	7.89722954200326	0	1.29299603064792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43729131-4	8.88125005201761	0	1.29345072289076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176824654-5	13.0430247173403	-1.87709828624282	0.596857994037211	-3.14496631526358	0.00166105954348848	0.0280546903408628	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95817759377732	1.90329117160805
Merged-chr4-135829210-4	12.1878355145316	0	1.29437071582681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29739601-4	13.8362563557058	0	1.29123569034662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44523933-4	13.3090284514949	0	1.28960908259187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60736865-5	18.1987087730637	-3.24185495262884	0.766587552667819	-4.22894285375074	2.34791970342654e-05	0.00100120195858747	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55642594868776	1.42436654726916
Merged-chr1-185196501-6	22.8051341373342	1.34977212369992	0.424124483281473	3.18249046425394	0.00146014323824842	0.0254506588547829	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13480173150745	5.42186114048651
Merged-chr6-70804768-4	6.24419782920877	0	1.29208950249498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50698682-4	9.70054689112282	-0.750901910391082	0.622417960558146	-1.20642712449641	0.227652842637407	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87148267210978	2.98591005256326
Merged-chr7-101052037-4	11.6761183415366	0	1.29277843578078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100499698-1	2.1737753357052	0	1.50780319996425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66803940-3	4.7436894493606	0	1.36037244326314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125775113-4	5.44510577022328	0	1.31301096616706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9487575-3	5.3831104467027	0	1.37958406204233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101655050-3	6.94726364145102	0	1.34878547008056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8916470-2	3.72163306213948	0	1.32365060899358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114895166-2	5.05411065856324	0	1.33405968806216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38013152-2	4.53753424669644	0	1.30241884050941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35779714-7	24.6442569024727	0.284051226548532	0.402852316834585	0.705100143845434	0.480747917032465	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65967920486997	4.01280721254815
Merged-chr2-129515879-5	18.2209830679459	-0.292956931348253	0.373419716140253	-0.784524540847278	0.432732387841034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09609423999857	4.51467915860529
Merged-chr11-69432271-3	5.10840041925964	0	1.31349897885207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17360362-2	7.58180843399251	0	1.3024086931454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12419452-4	6.71381192327832	0	1.3007355868959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55564948-2	4.24095748293694	0	1.38370574352454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73936790-2	5.24838291616548	0	1.30080771083255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103437850-4	6.74670835096842	0	1.30161976496441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9818172-4	8.07761139688336	0.665811492590611	0.736289607644622	0.904279356489264	0.36584729022921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70434136790883	2.05066483796074
Merged-chr9-105780168-4	12.0699725433806	-0.301449155243648	0.398024168223573	-0.757363947493566	0.448831849176169	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88779470265201	4.56869533039111
Merged-chr5-34242651-5	12.7629513074692	0	1.30804292394347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67483592-3	6.19413156788595	0	1.29343802114821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12592082-6	13.9500950270028	-1.01701807063506	0.55317017081662	-1.83852659505064	0.0659848466502864	0.454814202039904	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6822426990069	1.84515340046558
Merged-chr4-10912796-6	12.4915553151891	-1.04772558711435	0.66193599487178	-1.58282008416434	0.113462477661043	0.681588441371439	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40247633613375	1.58644687476835
Merged-chr11-86955850-2	2.8677912560648	0	1.39788660195902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34800019-1	4.55013469794878	0	1.32333565594075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52386131-3	7.73555775412097	0	1.31878244639672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14912171-1	2.9592205422168	0	1.53249903708656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78387865-1	1.54430905912091	0	1.66304270514193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21565996-1	2.93105597630808	0	1.38338684833924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30204308-1	2.58531574718795	-3.09611878144481	1.26882308660985	-2.4401500998199	0.0146811604630255	0.14732662337187	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27582939394901	0.423054662900563
Merged-chr15-93245771-2	3.27648673506689	0	1.3642777445857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121470396-1	2.86116837888132	-0.629547766672219	1.12087695468306	-0.561656445912238	0.574350114276355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52542427220968	1.15025660736152
Merged-chr9-120885103-3	10.1002364402104	-1.183095027985	0.599840092014778	-1.9723507043538	0.0485695851140087	0.363346091455067	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40480547130948	2.11933742128859
Merged-chr5-72250370-3	14.0109622959523	0	1.29818375579135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45046959-2	3.3572721839689	0	1.34251853364836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111234659-1	1.70891683385114	0	1.48690927551556	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37562054-5	19.367414239524	0	1.27778519180052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66235324-2	3.89308293195644	0	1.33622965892665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69400914-6	19.2883455955498	-3.96315643272084	1.01363686203697	-3.90983850444883	9.23578472372116e-05	0.00296716611876245	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9404603508136	0
Merged-chrX-145506066-3	9.95279315530533	0	1.30249673540112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21908273-1	2.96086088037355	0	1.39166357651076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28524625-1	2.10522819245834	0	1.57102601430897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5887025-1	3.83179451356721	0	1.33967129242029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83953904-2	2.87560704987789	0	1.34697812682266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-21579691-4	9.26961741803522	-0.0657875773595659	0.725938059626891	-0.0906242295566907	0.927791178746566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89549082642875	1.76419196995713
Merged-chr1-60173308-6	15.007724083011	-0.64403387727541	0.392332276479637	-1.64155211254671	0.100682858822828	0.623977816069471	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38782835523599	3.65894668528218
Merged-chr9-47708474-4	9.95514716624995	1.0383768415868	0.56856480735215	1.82631219547795	0.0678032492664597	0.464510895713765	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84360955958018	2.9516182323252
Merged-chr5-34695679-4	8.74677814079506	0	1.29907652080775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51532804-4	8.51620038110476	0	1.3191926830441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87529820-5	15.106752220963	-2.8456240887354	0.526455380981782	-5.40525216672421	6.47172785494687e-08	8.57812430850625e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21744879757503	2.4635411791775
Merged-chr6-70709527-3	4.98892530481626	0	1.3543516211157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47217278-8	22.8411616410368	-0.541017629986984	0.48353737998537	-1.11887447047704	0.263193695651327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68439208972382	3.18502777413374
Merged-chr12-71040581-4	5.96349631680844	0	1.32110146161293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22049853-4	16.4493949274527	-0.203121060258231	0.442400811252838	-0.459133561900602	0.646138256817823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02230008967929	3.73088921576422
Merged-chr15-50762925-6	17.4956540391312	0.504259863103784	0.421417460991282	1.19658037404913	0.231470153861174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38872648784758	3.80042123950172
Merged-chr1-178242319-3	8.67654055945577	0	1.30656623744196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140167143-3	8.34300754057922	1.15190286641708	0.50343964082579	2.28806548591927	0.0221337078116843	0.202882489923176	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66735362858132	4.93900441986811
Merged-chr5-105499585-3	5.91098652375235	0	1.3036326397423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93152652-3	10.8355529171707	0.637941459391146	0.662077655101117	0.963544766200748	0.335274210033582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94658690706201	1.63767395945907
Merged-chr13-9261940-4	9.17260652349246	0	1.28843714133866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82967693-1	7.09489837410961	0.142561484367659	0.925966580821358	0.153959643166822	0.87764155620429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08646950619686	2.25857354536688
Merged-chr11-103332702-3	5.97156198801368	0	1.32328537064386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67074123-3	5.77785477288668	0	1.29735323603276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143985246-5	11.3735305331119	0	1.31467606956205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74992929-2	5.7597721329095	2.18648600723946	0.95918553858353	2.27952353250481	0.0226359627225869	0.206472587949492	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	1.38442592474823
Merged-chr8-37011869-2	7.1279100853706	2.53690666730232	1.00394512724792	2.52693757701344	0.0115061951893159	0.123401252394721	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	1.90781241071831
Merged-chr12-98777658-1	2.67432526619603	0	1.41113964622299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51919233-4	13.0692299037458	0	1.28951103273262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94597831-3	9.08545131577729	0	1.29962444564483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137872628-1	5.86941143253166	-0.112138443258577	0.605818619139093	-0.185102338746097	0.853148767252633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99291026797824	3.83316046100821
Merged-chr5-23937152-1	5.14489543281698	1.63231531343531	1.07776399093013	1.51453873684033	0.129889256827713	0.749734420692849	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	0.958904680953568
Merged-chr2-169906600-3	6.4919953384324	-4.41666839598068	1.02909184624028	-4.29181167076261	1.77221230734515e-05	0.000800878184203154	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26723915271329	0
Merged-chr3-84883971-9	35.3828693140282	0.270199712090392	0.527486633764377	0.51223992191447	0.608483106180313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49283841234665	3.01904218755598
Merged-chr13-46906142-8	30.4332180190166	0.752207121982519	0.305591059532884	2.46148275127	0.0138364050704319	0.141207828476096	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69649445723979	5.28529530494034
Merged-chr7-55847782-4	6.04366866937128	0	1.30121167318967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6427580-4	6.80279037560229	0	1.31107481237305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24393163-4	13.8967681402324	0	1.29812105025272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150874735-4	6.22915914925155	0	1.29626189855196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50295366-2	4.81064766361452	0	1.30641833212711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94546227-7	13.1124015952799	0	1.28835353310499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81024060-3	6.58755995390016	0	1.33079008285348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21101383-6	22.3505002027441	0.782495953100409	0.375954290523913	2.08135928442247	0.0374010324987021	0.300837994788305	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03313920252525	5.71512885762013
Merged-chr6-131421805-4	18.4104519405087	-0.542970924386549	0.36243946664168	-1.49810099164324	0.134107013506053	0.766177245164646	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1621795602131	4.64295945140457
Merged-chr11-58210704-2	12.2159578170681	-2.78480113272564	0.599246625139659	-4.64717032336498	3.36519301391702e-06	0.000212055836728468	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23216021447145	1.75033869392915
Merged-chr8-94778645-8	29.7336088641166	-0.656621502942298	0.336966288719327	-1.94862668736938	0.0513400226826283	0.377927804688411	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70824192838256	4.0461272016496
Merged-chr3-126690863-9	25.2516872353652	0.439277790839132	0.334690027177618	1.31249142540483	0.189354377296167	0.979602264546253	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36563998642181	4.78302865986618
Merged-chr15-78355746-6	12.6859002135163	-3.18960460198852	0.826849012905986	-3.85754176663834	0.000114533112611034	0.00352358088839174	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69581501378696	0.581381506691384
Merged-chr1-176227706-3	7.08361412315764	-4.58231413073054	1.054529669006	-4.345362928527	1.39045576946111e-05	0.000658411034139172	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35229497677999	0
Merged-chr2-73511204-1	2.40221391680995	0	1.38263512962876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58804317-1	3.65863240192484	0	1.33136987362443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34504409-3	5.58404463492857	0	1.33151741035396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63205712-3	8.67375044123018	0	1.30896036221714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53431225-3	7.1414835315597	0	1.35839472018742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9354030-4	10.2295496816858	0	1.34217389932442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47766856-7	26.2240597672122	0.407554835575397	0.362130259284805	1.12543711862219	0.26040384936142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62458075864282	4.21923521191689
Merged-chr13-56129773-1	4.83413173711583	-1.28093834115511	0.83322666695429	-1.53732278617216	0.124214284220517	0.726995666518039	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38918140424378	0.900948542443349
Merged-chr17-26544530-2	4.51323282483238	0	1.31297061278786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90332199-5	11.2413980937321	-2.50004041300704	0.714687451593083	-3.49808914013292	0.000468604482366453	0.0104908902862713	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13455341058386	1.775524153257
Merged-chr5-127607747-4	6.82654173349863	0	1.31359201060966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34244180-7	31.75428056135	1.16579624369494	0.414077111817524	2.81540855657988	0.00487152585482026	0.0638201139753578	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03607627410706	5.22685689506328
Merged-chr13-35953137-7	19.313310893559	-0.639643142174309	0.375181542343034	-1.7048896866826	0.0882150002057628	0.563654776908749	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03005647214787	4.31745993239981
Merged-chr12-12316911-4	12.9189524750152	0.200854873659415	0.429736691063293	0.467390562259049	0.640220473637234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61335380741067	3.79702549369374
Merged-chr15-90649579-4	10.8133311967507	-1.24968691291356	0.898814796282394	-1.39037198551071	0.164415948840179	0.883805232048213	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81987983776057	1.428339764855
Merged-chr12-17239017-2	5.76041764426363	0.144447682277044	0.980386451265097	0.147337493384009	0.882865639955735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860868482386745	0.666688015277142
Merged-chr15-58423906-2	5.60434412517246	0	1.33344464627671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105059076-3	6.63859553887578	0	1.30817899134393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111233958-4	8.81625209344936	0	1.30486369413436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5885653-1	1.61731581643848	0	1.48646754974819	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108766630-4	7.38506011153291	0	1.30308008082244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118988569-2	3.02150296277261	0	1.48698456445787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151228524-2	4.34558541764422	0	1.32681698282151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-71379146-1	1.61528005200993	0	1.47531362393789	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35520168-3	9.49983466521816	-0.49421572243263	1.0449420490375	-0.472959933890932	0.636241764245293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00604125618525	0.683637474991079
Merged-chr10-7207585-7	21.572506128856	-1.66286822368712	0.604104296653717	-2.75261777295437	0.00591208771814507	0.0739814791324987	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53863900146888	1.40646071772112
Merged-chr8-82376325-5	14.4589655112319	-2.52741062317249	0.608651040763064	-4.15247893111936	3.28893042511951e-05	0.00130490860692082	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47183267138169	1.87496859647037
Merged-chr6-83416527-5	10.5725955930422	-5.21280569063802	1.00401808458415	-5.19194402040784	2.08109582092396e-07	2.2675281177448e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11773249290405	0
Merged-chr11-106480741-3	6.56159825355794	0	1.30084327872699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79602094-2	7.21456524726694	0.423740860516963	0.517190097540062	0.819313560975788	0.412607537454266	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06028412991467	4.65169355391977
Merged-chr6-140768373-4	7.5604124944578	0	1.30173378960916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67295817-6	44.4721689537417	-0.522527763896769	0.338191500373468	-1.54506474384997	0.122330603756106	0.719644907548301	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75590010655373	4.24454380803672
Merged-chr13-97699116-4	7.71621630887229	0	1.30864420136477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117138731-5	13.5001847813042	0.587399654876852	0.526614974936674	1.11542527811232	0.264668222202394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05156152356675	3.68371247208473
Merged-chr14-20828592-9	22.4308526037768	0.0717739429061147	0.397665214462685	0.180488361304355	0.856769190689898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02291670926733	4.2184141619722
Merged-chr1-59475802-7	20.1029757947926	0.0864991808237441	0.459852551985385	0.188101991497686	0.850796699975193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16498095235317	3.30844833993612
Merged-chr3-65315925-6	21.5213136264592	-1.21448218199884	0.43904502048537	-2.76619053931238	0.00567153858640564	0.0716020789156227	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42946832803339	3.14974121666416
Merged-chr18-39582089-3	4.83253679625832	0	1.31633095610353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146793791-3	12.6761507227854	-0.552814901709265	0.616492904441602	-0.896709269038523	0.3698740733003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96695225715012	2.62778741030123
Merged-chr17-17845521-5	21.3444538167777	-1.75109534610929	0.619258307402082	-2.82773008480984	0.00468793140634885	0.0619740169288432	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34037479443502	1.94822387057749
Merged-chr16-30733028-7	20.8452798355492	-1.04329004797095	0.515182393486831	-2.02508870869947	0.0428582561268093	0.332180714608288	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45371785727393	3.29969394493008
Merged-chr10-94098240-2	4.27198999643849	0	1.33147686665649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19161010-2	3.58038846253266	0	1.38343600511873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84060754-1	2.55730993404371	0	1.48172677317946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92398385-4	7.33279210291345	0	1.29817404087147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63691276-3	8.92080831740483	-0.69527169955292	0.863354287017134	-0.805314469399422	0.420638234105908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32814199437305	2.48545968646567
Merged-chr3-130818898-4	5.59590575500106	0	1.31475672994709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34661283-4	14.360943841469	-3.64269766917028	0.733533930869286	-4.96595660524312	6.83632414454558e-07	5.95635250065967e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63448533497499	1.03956264035389
Merged-chr17-86972995-9	37.1693465365443	1.13527758542728	0.30299342949102	3.74687196133053	0.000179053420929209	0.00501518424519507	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24790836663491	5.44880283155459
Merged-chr10-93375319-12	55.6209332959286	-0.118031900147987	0.236589235706395	-0.498889561883802	0.617857187908949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.64739258223566	6.53561649822967
Merged-chr6-146913639-6	32.4899642354856	-2.3533390849076	0.384316734313202	-6.1234364127109	9.15784124087814e-10	2.36532922421511e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7884791507338	2.98228669229723
Merged-chr16-10969642-2	4.84576366617785	0	1.33150620775773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79291407-4	11.5638051768113	0	1.29139457360102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62054201-3	8.92563816092316	-2.97164222281436	0.609690282516803	-4.87401933084355	1.09350282751249e-06	8.58980728757792e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72715430080496	1.6995072319729
Merged-chr13-20798095-8	33.3881980722282	-0.891662770932821	0.309722898130112	-2.87890490601776	0.00399058642826267	0.054944213993599	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99764300107302	4.13558997742124
Merged-chr13-64181063-5	20.2632891642908	-0.933694913979364	0.446432602271459	-2.0914577233578	0.0364870523954261	0.295413570292592	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64649814161782	3.65658749275998
Merged-chr3-104518616-1	3.13871169413046	0	1.36922693078257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24860540-4	8.7165504867537	0	1.29589670246321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64234349-2	6.43845271856343	0	1.3301024485537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136680013-1	2.88030740959803	0	1.51646027671783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107081451-3	7.0421230482237	0	1.30097140928645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157402997-4	9.98335009685703	-2.02027786845955	0.626986914938403	-3.2222010066319	0.00127209857511249	0.0229314630315313	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40433980777344	2.15258675016244
Merged-chr1-180430008-4	8.02434424620657	0	1.30405810099041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129718031-1	5.14303706827159	0.967571182123236	1.82601945262481	0.529879997024348	0.596195135751754	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.683637474991079
Merged-chr8-40580512-8	31.4905548797848	0.263151384638735	0.326833824379331	0.805153460289704	0.420731129003755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23567491897218	5.45369105123649
Merged-chr5-99361954-4	7.31529045166826	0	1.30826134501741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36307190-2	4.87061731049667	0	1.31551792406728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53462154-4	12.0488839597068	0	1.30099607983324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31768754-2	4.99413019393951	0	1.41246574824908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105643231-6	20.7716180013606	0.445190817154507	0.529942539696115	0.84007375103307	0.400867036510456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68273331945673	5.19377305386355
Merged-chr4-45940230-4	5.73686180596565	0	1.3122892992776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83843021-1	5.59347352764443	-1.2529448396825	1.01337089376655	-1.23641289422226	0.216305125616624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88411546520112	0.683637474991079
Merged-chr8-64951094-4	10.3660719015012	0	1.29109460061214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151683199-4	6.54171752778426	0	1.32154566369738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104370596-3	8.35181594885711	0	1.30766448859376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104190640-10	32.2397645047221	-0.798308427517081	0.313530084742937	-2.54619402208759	0.0108904638878016	0.11846982740341	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41840411816187	4.47294443766753
Merged-chr2-128828713-4	7.67886543414016	0	1.29003033846765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62351541-4	7.83377042348924	-0.821865238613383	1.06305785682756	-0.773114307311588	0.439454734485882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913544961417945	0.563523181795778
Merged-chr14-44078002-4	4.87075742195218	0	1.33990701603156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71644229-8	53.518950731603	-2.79567693320684	0.305555560826064	-9.14948798722164	5.72040241321979e-20	4.15339351215845e-16	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.70193133570932	3.98780445009588
Merged-chr9-100435435-10	73.5634131461743	-0.340720854550948	0.263915111276687	-1.29102442411393	0.196695208421904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.13189054988338	5.65683020231765
Merged-chr14-8114374-3	10.5427126369267	0	1.30042987807338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35274947-8	26.5579269694599	0.270487912318124	0.328632334043478	0.823071512745118	0.410467327505295	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89271100146766	5.07383425067824
Merged-chr10-68136622-6	20.7505520342084	0.781254469997752	0.522818405630181	1.49431324831815	0.13509376399185	0.770115772643411	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16537037664008	3.14349016941205
Merged-chr6-136721213-8	22.2945086834965	-0.397531071559953	0.329363283626233	-1.20696838816763	0.227444318364148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78183074505585	4.27845065001268
Merged-chr6-52486293-2	3.36473394660566	0	1.37659069836561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46848900-1	5.23790736334368	-0.236380736556253	1.00999424341004	-0.234041667166499	0.814952631082994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48427441876321	1.13132003301738
Merged-chr7-98711213-1	1.97948158378285	0	1.43777129250922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33243469-3	6.57897479365386	0	1.32890025243994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81961505-3	7.53370254183045	-0.654780771429423	1.09153476372765	-0.599871660700308	0.548591770417468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24088971669083	0.61242769162773
Merged-chr3-8789956-1	2.6499070431475	0	1.37683996486396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31118739-1	5.21292504833106	3.57632224221534	0.964925620845434	3.7063190830003	0.000210293330956744	0.00568784271717691	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	3.26230735005113
Merged-chrX-93602417-1	1.51506964441621	0	1.44020464672465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40476715-3	5.51888828996444	0	1.32232228154885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139365323-1	6.29447064110618	0	1.30961567543872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131787245-1	5.09235416349334	3.98730274263879	1.48039069362542	2.6934124618644	0.0070724714850905	0.0846662698265352	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	4.03684876101986
Merged-chr9-83537650-5	13.8563730412768	-1.74620660122959	0.764771672848817	-2.28330449887726	0.0224124382049757	0.204919992576234	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07129677153786	1.20997209872237
Merged-chr17-37542488-2	2.96902488697131	0	1.36902531832756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41523682-1	3.46686423826575	0	1.34581054148138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186675449-1	1.77618452721193	0	1.48701690111061	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106758997-4	8.47513255841164	0	1.28832807095348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127020354-4	11.0833207955501	0	1.31591954911709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122272507-2	2.452116008533	0	1.38971530791065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115643103-5	12.9435713004774	0	1.28408698171745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62218261-4	6.1644194916803	0	1.30283355501945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-153827896-2	3.91180103848413	0	1.33096587337541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92940784-2	4.28808316576449	0	1.37036417038996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-25562918-1	2.21737903749586	0	1.39413085779657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179834195-4	9.10270894205734	0	1.29827149555877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44540595-3	5.20100808090813	0	1.35755188718007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40314771-1	2.86699436931499	0	1.35111730286049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31097793-8	25.2509219269181	-0.755081541037836	0.329650306277356	-2.29055313057267	0.0219892723456542	0.201885106215812	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72638970648653	4.06530892752065
Merged-chr5-53194620-4	6.71212581228766	0	1.30912059208201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169777386-3	8.70384507950092	-1.54787925291863	1.13211559800241	-1.36724487821723	0.171548562847393	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39512694655353	0.306240821987646
Merged-chr4-59096608-4	6.43860491762686	0	1.30119630133054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38797282-4	8.53385350326217	0	1.28623456910744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64103616-2	5.58130352854305	-4.43052948004729	1.06523343787777	-4.15920991822609	3.19350307823663e-05	0.00127325830780782	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86238843772836	0.306240821987646
Merged-chr13-112602820-5	14.0766610073078	-0.000156511778114047	0.574357521331874	-0.000272498874483463	0.999782577357904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46882135931991	3.60450854562673
Merged-chr18-53921406-14	54.1350450330211	0.837869665372808	0.267221818473152	3.13548373467487	0.00171570942325068	0.0287842741904336	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26673892590311	5.1074141996955
Merged-chr11-100570635-3	5.55859259821352	0	1.30419830324457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46808116-2	5.8461752232847	1.31085252387384	1.0803260948571	1.21338596754642	0.224982288774067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.07938469868934
Merged-chr7-38025072-7	32.0721725207179	0.276576261956157	0.312922192789659	0.883849942027179	0.376777222517776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.90557771969053	6.10376387657185
Merged-chr7-80375534-4	13.796003506793	0	1.30211046185399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50061604-4	7.23491688381016	0	1.30193176620385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45514356-6	35.491259433348	-0.334185856699511	0.46327424725265	-0.721356429115862	0.470690246674746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07282904890658	2.78469821888068
Merged-chr17-33817149-8	49.1737357213788	1.10758329374502	0.232046361453212	4.77311209194868	1.8140076064919e-06	0.000129549880933137	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06519054470549	6.15043899800683
Merged-chr16-24487862-4	7.46076239580147	0	1.29870984716082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81193968-4	11.1466558245446	-3.32316828836531	0.921552860417796	-3.60605281704483	0.000310889885747393	0.00768358943799135	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86935629134682	0.73596151290311
Merged-chr15-5126654-3	5.93384726004512	0	1.32098083039806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41122498-5	12.3707856798309	4.80246080148173	0.956368725695742	5.02155776579585	5.12540840519881e-07	4.72815865568059e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	3.35129661436606
Merged-chr16-76200438-2	4.12664915079483	0	1.3236682955964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-65545753-4	19.7571120509518	0	1.28620968302845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97299547-4	14.7847271643099	-0.993926924737913	0.683576477710807	-1.45400983963992	0.14594357821033	0.812682493543436	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35645459607976	1.4028653962853
Merged-chr4-130799174-6	15.0938013961276	0	1.29211412361728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75599954-7	21.240510871337	0.927544238571531	0.41259980640293	2.24804816720085	0.0245731186800986	0.219755715515222	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39022983354673	4.2911125145029
Merged-chr18-67324529-4	7.53640061487288	0	1.2918253212849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154118573-4	6.41403947434565	0	1.32178350872897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25056664-4	8.0417078223835	0	1.31829175161068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94039026-4	16.6733085274991	-0.725750041319466	0.431571230467999	-1.68164601827712	0.0926375014819167	0.58501986715824	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19363879916527	3.43887531883344
Merged-chr13-92337042-8	25.1681835081904	-1.0635029713578	0.470406116367665	-2.26081875714086	0.0237704825956153	0.214219549812864	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11827590102491	2.65057583602424
Merged-chr17-88496543-3	6.35822953284754	-0.640734565673071	0.694303892838118	-0.922844553058646	0.356088219096986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02283818331095	2.23123803868452
Merged-chr3-26932625-4	7.39008409729008	0	1.32903060248359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150891747-3	8.77650048850565	0	1.28561999583985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89515690-3	7.22980621636992	0	1.31201214719781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35573975-4	13.4066369625636	0	1.29903258601129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55969332-3	3.86770436199863	0	1.35064370982114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3659692-3	8.190086503527	0	1.32220463427083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128050855-2	6.47092489625951	0	1.33216206476094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53800220-2	3.72895064573343	0	1.31269926610761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44986282-4	6.27038276881358	0	1.29718557340757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44714671-5	18.4691808029169	-1.83818953376338	0.430852841002415	-4.2663976161482	1.98654597330294e-05	0.000875243100249431	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31169608598454	3.50194508176053
Merged-chr9-71951433-12	67.8407612087019	-0.0827833515015531	0.217182807863751	-0.381168989920635	0.703077857767112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.56480547491793	5.41456789414129
Merged-chr1-55430438-7	25.8069722961717	0.625412681181156	0.322109978759172	1.94161225178544	0.0521840585656618	0.382274988159615	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63415261984725	5.31269258215286
Merged-chr5-41519151-4	18.7931147142276	-2.06923118653109	0.67212283435023	-3.0786503311281	0.00207940587840585	0.0333612970930439	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66149944058469	0.905469781553611
Merged-chr11-118254331-4	5.79851491672851	0	1.30051224876334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108146625-4	5.71432301200679	0	1.34454708061785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74454100-4	7.81975567564445	0	1.30162640257298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21825099-4	7.31730302985459	0	1.30147764305985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136728434-7	27.5107594724863	0.00892426368115007	0.376815206622213	0.0236833957980293	0.981105150525583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46238646149927	5.29069640235573
Merged-chr17-42837332-4	6.23574970172058	1.3092036478464	1.30747614764534	1.00132124796629	0.316671523614816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr10-127114543-4	8.99740723891882	0	1.29109484967774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50939147-8	22.4134455489516	-1.03601795407196	0.357284724733198	-2.89969842636178	0.00373521842484086	0.0522211346148162	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09372402914276	3.6867213312228
Merged-chr16-21666687-1	2.35017481583372	0	1.35404047566336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99213939-1	3.63318001630466	0	1.46013559742685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41484219-2	4.01402806403068	0	1.36244192986054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46199542-2	2.1767016100435	0	1.45905390746581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55755096-2	3.8725913930354	0	1.33996081771928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72184588-2	7.7206912669257	0	1.30523702487484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120576281-2	4.03120309720813	0	1.3226936621417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21676819-2	3.26834373773537	0	1.3490583876043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46120775-2	4.07581394927958	-3.93078819428638	1.04301282744738	-3.76868633908021	0.000164108951757502	0.00469110392018624	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26817956531024	0.306240821987646
Merged-chr17-70122276-1	3.20602960723226	0	1.47587334749807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6476099-2	3.11789173490181	0	1.37299733725526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97246620-1	3.69975909672413	0	1.34218055943605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50275097-2	4.92310311775211	0	1.33991837477277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76406492-4	9.6506584302319	0	1.30858931828107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89145568-3	6.51783764481347	0	1.30544268403985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148531877-10	30.9417765189767	-0.647169400555386	0.370316335288712	-1.74761234891469	0.0805311755516895	0.527505031836478	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67997372820099	4.03929583948814
Merged-chr5-43848538-4	11.5816832699428	-1.0078993975968	0.612939184249163	-1.64437096452147	0.100099598924754	0.621482982549831	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31917503717171	1.62306943957144
Merged-chr17-72899071-4	9.00452069248457	-3.10436037334498	0.723229314756939	-4.29235971220039	1.76784245089194e-05	0.000800564329840506	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38216631660807	1.20724342340814
Merged-chr8-70729200-6	24.5770934588627	-1.85376500544549	0.498642105668267	-3.71762629824676	0.000201103455250279	0.00549156138185739	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67195610213575	3.42446949337354
Merged-chr5-147758195-6	21.9005949651714	0.366169483573962	0.541534370166743	0.676170348081906	0.498932496376781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48603441024765	3.10017999916555
Merged-chr1-181245168-4	7.26126884437915	0	1.32732695168929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84809158-2	4.79320540083826	0	1.31121296042252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146872942-5	14.8510991396036	-2.10453467709018	0.470470717546674	-4.47325327294443	7.70384377358295e-06	0.000410951326717185	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86669485855308	2.63241967456076
Merged-chr11-5512467-5	19.6521080709747	0.579762533587128	1.0194182495967	0.568719005978645	0.569546847563747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	0.733321818366247
Merged-chr5-74471009-4	6.89491467015285	0	1.29796899555007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-3983132-4	7.92224287645083	0	1.31813669057655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117938452-4	7.04649919930116	0	1.31703941223463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171466877-6	25.1306756424413	2.61141676794583	0.38928032396684	6.70831944788526	1.96878568770072e-11	9.18944782489221e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89160805239332	5.50479799293674
Merged-chr9-121598319-4	12.5595676093019	-4.8468963686368	1.02312238602808	-4.73735736293798	2.16523152428596e-06	0.000148311550509424	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37526359201754	0.382164212378408
Merged-chr6-54171904-1	2.95760382640631	-1.07995229266926	1.22898312004096	-0.878736473315653	0.379544177766749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26325569010659	0.469435083901436
Merged-chr9-31543538-1	2.66862920565248	0	1.43119179134561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-130228479-1	3.40566414124289	0	1.32819574508622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83822016-1	3.05924324539942	0	1.45214872770602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36922271-3	6.7330129174986	0	1.29130707073816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33276511-3	9.31584082442098	0	1.34084560596805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106261602-1	5.41852926014599	-0.445124315140351	0.814343450860013	-0.546605138986829	0.58465003774829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83160136574171	1.27663763006505
Merged-chr10-42245064-3	5.98433560756558	0	1.35205217492573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117365158-3	7.32802835222729	-0.998534243496274	0.802135656515984	-1.24484460375859	0.213188876907925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45514670202798	1.40000983364339
Merged-chr10-60260313-4	7.83217791126709	0	1.32464718208881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178449360-4	5.6576997527452	0	1.30090929080165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101997557-7	24.1258001029108	-0.128350390914562	0.330393257493532	-0.388477633860535	0.697662602556739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49291536733015	4.36091188282557
Merged-chr3-41580070-2	5.22297716821167	0.306666484291698	0.836042890012079	0.366807119533386	0.713762896647417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30739632986129	1.41695929335733
Merged-chr2-79131438-4	5.63169857984968	0	1.32834494626397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104701122-4	6.42223843343587	0	1.2977266278665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5411136-4	7.10677510385171	0.881109319920361	1.24184695937189	0.70951522107524	0.47800480929301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.844015785373878
Merged-chr16-38679643-5	13.4608368465056	0	1.28743809093415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17860325-8	23.5406868119789	-0.429103781455468	0.347546929726649	-1.23466428488655	0.216955473221707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57326413016879	4.13196208624228
Merged-chr11-68914749-2	9.56510711645465	-1.20464967731937	0.543839999803321	-2.21508104912295	0.0267545019429998	0.234482253750975	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87447272986052	2.31465917458896
Merged-chr11-5960783-2	3.84148022417675	0	1.36161171666862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132010631-4	8.09344777085024	0	1.29866987691794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61513482-1	2.89579485380233	0	1.34789587388266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57028114-7	23.4995643901406	-0.494361279362134	0.415403899471779	-1.19007375710906	0.234017403750693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86268270160336	3.99095559667253
Merged-chr2-52967149-6	14.2043724682755	0	1.28394382524381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33873732-4	6.73381844304496	0	1.29821270350387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58280691-3	7.18208170736342	0	1.30730576446853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97343727-5	20.1291892557868	-0.503753985675638	0.43147242020373	-1.16752302600889	0.242999215035831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8817554907701	4.38085765488006
Merged-chr10-44565336-3	8.3793834120035	0	1.29718115776615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11418480-4	5.90499531136869	0	1.30100835658929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3913631-3	6.11761605842682	0	1.29838571371172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107640309-6	49.3502868960526	0.984299449750972	0.422010986868044	2.33240242642959	0.0196795305854648	0.185006273289855	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91144642789653	3.95013472792649
Merged-chr19-41372582-6	21.7776527950986	0.246486123349921	0.414501920097822	0.594656167797126	0.552073326789178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34456335613047	2.85325874715886
Merged-chr6-115507571-2	5.14272495909193	0	1.29338977399191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114175746-7	47.3333410605179	-0.331375533351761	0.219877970617994	-1.50708837461247	0.131788006241125	0.757749147015623	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.32569130708613	6.00687396929395
Merged-chr3-51208891-4	8.36499014659094	0	1.30145229765446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83814327-3	8.94766908749644	0	1.29945387338234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108401727-3	8.77592406335323	0	1.29545850309472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22363758-3	6.59836812369977	0	1.31906678609427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96706874-4	6.65173520727601	0	1.29865672301332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46770494-3	5.92736527020385	0	1.31618151877284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117872844-6	33.1130221088157	0.134109817786896	0.402678674542282	0.333044251571892	0.739100880089646	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74474345767984	3.76756050375901
Merged-chr15-83496089-1	2.35295408405838	0	1.35316147686003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5485463-6	18.6374987482245	-0.273323826960607	0.377507767589851	-0.724021729951696	0.469052394574684	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06630461612729	3.10653591947561
Merged-chr2-16310872-1	2.40224208898876	0	1.41226644986117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87722501-4	5.99011893774961	0	1.35514976962024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173621907-1	2.89963363144931	-3.31590072703659	1.44412755820143	-2.29612731105715	0.0216686031448172	0.199561812292015	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96504328649846	0
Merged-chr4-137804744-1	2.25991207851842	-2.83464699227883	1.28080663115083	-2.21317326389219	0.0268857026138577	0.235285003750522	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68762436587525	0
Merged-chr9-13312972-1	2.59022663814519	-0.864700438298279	0.951221608237953	-0.909042047415275	0.363327931254572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26922145896042	1.20275690226768
Merged-chr2-59969321-3	4.3656140554351	0	1.3821398764301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32666647-3	5.62719927015605	0	1.35537591703157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59662773-3	6.41862763587271	0	1.37042424819186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3128418-2	4.97984806301883	0	1.35733761690153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44410768-1	3.14097757213747	0	1.35599075957575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8494443-1	2.4793848900258	0	1.38558628665085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110703119-2	4.5318619475093	0	1.33185605415766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33687592-2	4.40309889001301	0	1.30185072084657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45947963-3	4.89103218042653	0	1.373770231895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22496820-1	0.791144493835153	0	2.09504936873615	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-108178589-3	8.13057523434322	0	1.33433180857157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90609267-1	3.1249726419985	-1.92142613581283	1.03675091391236	-1.85331511169061	0.0638372064392834	0.444021766023562	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54285065293381	0.581381506691384
Merged-chr17-79598363-2	3.19698987695253	0	1.4151084285475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52712134-1	2.97483072273179	0	1.33502467769421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77368333-3	5.42346233645145	0	1.32845829783425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171851776-7	23.1062819372986	0.791983763907462	0.489318847818871	1.61854334333884	0.10554555383484	0.646511038703734	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32137165581315	3.61958354526469
Merged-chr2-84094982-5	21.2302031016362	-2.80020142328366	0.476795790092772	-5.87295752493708	4.2808818621406e-09	8.71459520758379e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70601244090951	3.09928038700072
Merged-chr15-51696906-4	6.46037691782234	0	1.29467208009646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129020618-3	7.1182194878088	0	1.30110922571692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92485815-3	4.74713456671239	0	1.29684785966147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138447600-7	18.0930901639058	0.564982630235872	0.462092497562451	1.2226613355901	0.221457636231566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8430718227795	4.54478789240983
Merged-chr2-22826412-4	9.18899730766841	0	1.30140697074471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78185088-5	18.5719683904634	-0.640397884016685	0.371933246944966	-1.72180865592648	0.0851041860631263	0.548822475326266	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10707930890681	4.48693201574258
Merged-chr12-84019228-4	8.88516491087639	0	1.28421313821597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156411514-2	3.96058387228324	0	1.3599985331384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166683118-2	4.82396623763306	0	1.32082335506169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70038269-3	4.50923447746615	0	1.33861098947998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36173171-5	19.2822151891835	-0.747494602293862	0.42953876611013	-1.74022617111632	0.0818193119007839	0.533855692008849	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16283487365062	4.54001355670896
Merged-chr10-67582110-4	7.19739129086406	0	1.31905821847952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117338655-3	6.14622537751583	0	1.31027827761298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123256850-7	20.6364210081607	0.065389653707624	0.471051221758048	0.138816440096638	0.889595202449689	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51922107216498	3.63330004769678
Merged-chr1-186549433-3	7.1833933661058	0	1.3475118330831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35734232-3	3.71715033650168	0	1.33489982139156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84957880-3	4.91452719858337	0	1.31739030102876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96535868-2	4.82912288181528	0	1.31352579588718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104357857-1	5.1481719982124	-0.640878966960494	0.839568936117914	-0.763342876790865	0.445258937467712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00875352099997	3.32016527145042
Merged-chr8-79491507-4	10.5023943572807	0	1.31056623066858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91498444-11	39.7495198602809	0.344366934762055	0.291314705700377	1.18211311692669	0.237160820428864	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50620347757989	4.88674138062175
Merged-chr4-24568193-4	7.57663395013228	0	1.30352625897557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23121456-6	22.141469427875	-0.0604888344201286	0.391768664140658	-0.154399368700941	0.877294851394502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3487943091161	5.0728993558318
Merged-chr3-84169114-3	6.15456644369231	0	1.30137200167382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24427752-4	6.96589445034223	0	1.29425972497445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44510240-4	6.45945710715064	0	1.30212099490241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99937436-3	4.97180541356254	0	1.31595747134215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95849810-4	7.62636240839242	0	1.29357706703158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72268591-7	36.3216837697553	1.96657385779536	0.338352343338118	5.81220699816508	6.16545354677037e-09	1.18845937305975e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58089996616613	6.47672157407641
Merged-chr8-41292215-3	7.26881555578971	2.48135618425967	1.19945230167718	2.06874102520794	0.0385703952168168	0.30789409306598	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr1-164218280-1	2.95590004972786	0	1.4322825264874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128111334-3	6.7743002495816	0	1.30413655029793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125337035-1	6.39253342399486	-0.223552602480091	0.819236549950571	-0.272879185497252	0.784946087088139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66621566434461	1.29948469469889
Merged-chr10-17771858-1	3.68955002583467	0.0917584680195149	1.40434355773862	0.065339045786824	0.947904054706287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr8-119412766-4	12.0402640635704	0	1.28400628647586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68052930-4	11.7519623477675	0	1.30464549167186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120748266-2	4.86413748804068	0	1.31990159095169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56701022-3	8.07175701399384	0	1.3064739699584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34445827-4	9.02747789856141	0	1.28780709976105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85657731-8	24.1486349613156	0.673472677430194	0.347916479569093	1.93573089226562	0.0529006688210418	0.386067355905718	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66405713129128	4.26692287789088
Merged-chr17-5521750-2	6.80812332958913	0	1.30133915763899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19239628-4	6.56845800333649	0	1.30957632636375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45675989-3	6.99001535750477	0	1.30500857575937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119428942-7	21.4080837626026	0.464331495798481	0.381485704121989	1.21716617629792	0.223540996391208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9510912996944	4.13889433705777
Merged-chr7-83571313-4	7.59780522016075	0	1.31710260289018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-110041632-3	6.67861236245648	0.936959968502372	0.941949568807347	0.994702900802543	0.319880783211896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	1.15307255889252
Merged-chr11-69850173-4	10.5681668074511	-2.61303174727641	0.568016352792481	-4.60027556324783	4.21932405353295e-06	0.000253380063448586	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81635675939019	2.0292145465841
Merged-chr14-48896482-4	12.3535010061183	-2.64554980806814	0.707303546558976	-3.74033160294291	0.000183777638408102	0.00511244510830813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26234390784435	1.41695929335733
Merged-chr19-40722527-1	2.91042039524861	0	1.33748671801654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8669351-2	3.86158231816556	0	1.36898641835046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119962929-3	6.64782149135725	0	1.34249044815219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-27168417-2	2.80228266904743	0	1.45333517541398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77361205-2	3.82419669146439	0	1.34067971372808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72241727-1	2.42837173932689	0	1.45200300592401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105117797-2	3.70176964747958	-0.983511678509051	1.03322330684168	-0.951886849625385	0.341154369477211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82014249117019	1.08186277552917
Merged-chr10-68241636-3	11.9843947917384	-0.730945236528715	0.46729938555216	-1.5641904507643	0.117772849108461	0.700650350307867	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2918200594616	3.35496993648012
Merged-chr14-51897084-3	17.333640536196	-2.1172929070474	0.48241401609815	-4.38895396152135	1.13897175533576e-05	0.00056351143589113	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01215920335205	3.19562500384098
Merged-chr1-191119916-1	8.85969483392783	-0.846448197466391	0.540928583068266	-1.56480582457882	0.117628445622027	0.70010212271503	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15003471370556	3.33344304526824
Merged-chr11-98954593-6	18.0957657166375	0	1.27795017004006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154074293-3	8.3494508148572	0	1.29268115250917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31409039-2	2.70341823836629	0	1.38301844600943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57835291-4	11.0661732526494	0	1.31067243165835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48140574-5	13.2075615541482	0	1.2896317649161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-92303550-4	15.5383667442425	1.87221431343007	0.414786461909424	4.5136823048938	6.37116339107217e-06	0.000352822070299154	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09958386893761	5.89878949171063
Merged-chr10-99203749-3	7.56536090269767	0	1.30130282841639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8575633-6	56.6706944629154	-1.18632664302461	0.463395719210966	-2.56007251220316	0.0104650325178941	0.114893819710065	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85980018669385	2.2758534078984
Merged-chr11-121697777-3	6.11195817984356	0	1.31792080237171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25464754-3	7.13981393215494	-1.5027017557404	1.10620226535866	-1.35843308479683	0.174326302054505	0.923450878243889	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30486885723606	0.382164212378408
Merged-chr11-85324085-3	5.00053095254962	0	1.31420270836076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71263383-9	42.6468059055416	0.558371226064255	0.257315659854536	2.16998540384177	0.0300079517074227	0.256662252915346	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80175241388062	5.38376641980002
Merged-chr3-126971280-2	7.92385360995438	-1.96208945698106	1.09636610834553	-1.78962979797136	0.0735134448780608	0.493964994241826	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64501605075258	0.306240821987646
Merged-chr7-102247104-8	24.4621177765056	0.179503651819988	0.468025422841092	0.38353397712956	0.701323882604645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30028063281375	3.69899581190143
Merged-chr10-57731850-4	5.7937281684812	0	1.31458888798341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52755011-8	44.0824011223276	1.62081127004182	0.339112806740118	4.77956372577795	1.75675984551724e-06	0.000126988085027843	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62723909629221	5.15019426219887
Merged-chr10-96606093-2	5.97468881739502	0	1.31946071070179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40708394-8	60.7228069064983	1.64311652437909	0.309909123780613	5.30193014111538	1.14584691736764e-07	1.39434846670961e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70989295705187	5.44966914184001
Merged-chr2-118905933-4	13.2566107608342	-3.77792866404384	0.972786841169811	-3.88361407058174	0.000102915215420562	0.00324551970443048	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83721742184968	0.469435083901436
Merged-chr7-67308325-4	7.39394154274224	0	1.30939705039592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20901621-1	3.72710275829856	0	1.3434987958075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47795600-3	7.62724816832634	-1.84988561729527	0.698501727445308	-2.64836226541775	0.00808828004665499	0.0938453032543887	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23305482427274	1.87697405107109
Merged-chrX-36820377-3	4.5886049191853	0	1.31276763523598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68465561-3	4.74901540301051	0	1.34178550564282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79940912-4	9.13380651078756	0	1.30365231515603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114294127-1	2.98338014665327	1.18675502931119	0.943022730795048	1.25845856155625	0.208225964457478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39632831439826	2.10822668382129
Merged-chr17-50130583-6	15.3180209663547	-0.229146054691422	0.465744369049043	-0.491999624513534	0.622719608984109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99539572447903	3.56869631918596
Merged-chr14-104868315-4	6.76615548498314	0	1.32769797467455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52170246-4	5.26377330915809	0	1.33525262100487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104375430-3	7.56908852480205	0	1.30917574099244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3833044-4	8.17360507212226	0	1.29429661681415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112186586-2	5.68739183714671	0	1.32981208577625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-118126762-4	7.46004006400454	0	1.30259404979321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30975562-4	5.78140938126372	0	1.30519736901028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171051030-8	26.3501490522265	-0.439288323092908	0.392174109086278	-1.12013596235713	0.262655827729957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43442898304194	3.45096887235768
Merged-chr18-62250254-8	31.1936554027429	-0.419034979224723	0.307137227585282	-1.36432493878773	0.172465320265218	0.916341409809222	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62438494088301	5.15785159300249
Merged-chr19-48049474-3	6.40548821319317	0	1.31997772263751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16856931-4	6.89178630117677	0	1.30124761466361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31784468-4	11.5664002655599	-0.568252756167521	0.602328186397601	-0.943427136568392	0.345462468352139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77838185942582	2.86136436759119
Merged-chr17-6476754-3	13.7947634815361	0	1.31858158671829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99088429-4	7.74273276502353	0	1.29510299733752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11288377-4	6.92529136604135	0	1.34619630758965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19301234-2	6.2307101559734	0	1.36177393543677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160251613-2	2.94014635245381	0	1.3723227703779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17739252-2	6.29043852153074	0.631884686277251	0.876963762671813	0.720536826233403	0.471194534177399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91864477046241	2.035112151504
Merged-chr17-66975823-2	3.79933155963171	0	1.35607763013142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94093590-7	28.8893669035499	0.0692129039547572	0.385894003707016	0.179357293168271	0.857657162682207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6824881952389	4.55442902196598
Merged-chr11-119034354-4	8.56473125615278	0	1.31691667010934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13426538-4	12.3294600701904	0	1.28571963916447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-29853376-3	6.55536314865048	0	1.2980466988654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102046198-4	9.24083715476031	0	1.29343400577615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66140180-7	18.7107617490535	-0.148934168885593	0.42886037848274	-0.347278919569362	0.72838178619968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92169360977184	4.09816549901739
Merged-chr2-129601218-10	42.8448677023409	-1.16997940357928	0.279604847811423	-4.18440314156626	2.85916320572074e-05	0.00116698862486588	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.09974301280707	4.95680047446523
Merged-chr16-65197403-6	18.0342883876867	-0.523063797398797	0.679314020545616	-0.769988225737898	0.441306877085727	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3968790240699	1.69736543272236
Merged-chr5-45719301-7	24.8405717299342	-0.316923907294454	0.385534743680003	-0.822037215814468	0.411055716316347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4754489154504	3.37564272173116
Merged-chr17-71868116-4	15.8242309925638	-1.27341291873632	0.389065827674055	-3.27300119455141	0.00106412027847464	0.0199382046448183	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51415655204943	4.38818421418427
Merged-chr2-165969045-9	45.7436049084496	0.289621997918781	0.290642487176062	0.996488850383865	0.319012681746424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6679835501084	4.96104724803388
Merged-chr12-70714425-7	11.7045949800802	0	1.28994596576264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135712508-1	2.11987851435295	0	1.41982496828475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160279923-1	1.96419462293472	0	1.40751560691884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21915642-1	2.59662377544769	0	1.36953507494051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62732825-1	2.82873363638561	0	1.38557683241834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166190178-1	1.96531291824656	0	1.43902639092152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56469368-2	4.95716357059144	0	1.32477097461151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46457194-1	2.1922375046622	0	1.3943696396063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136725510-7	19.7381235942232	2.03035577159358	0.586979262471023	3.45899063460323	0.000542203757450743	0.0116972092223098	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32922714617287	3.42414620212235
Merged-chr2-165060110-3	5.08150457150808	0	1.32071297448343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135460334-2	6.07316919293624	0	1.31271358034582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55483918-1	2.82075890991723	0	1.50437709572851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30209462-1	3.13065031320894	-1.22753427035727	0.860793564439908	-1.42604954435967	0.153854041424421	0.844710652908774	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45510064395608	1.63900399389441
Merged-chr2-114548593-1	2.35444529485515	0	1.64913063426875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49763364-1	2.15794335937944	0	1.59091730090397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60928059-4	5.40271677021852	0	1.32491039497741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129631241-2	2.39280913322132	0	1.40907626442797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46326912-1	2.27537166664861	0	1.38582618092036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80614574-1	3.28913383594789	-1.59728531473988	1.16388933191843	-1.37236872178138	0.1699486820499	0.905822969002293	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50536515546503	0.793480537552656
Merged-chr7-81121270-1	2.84959010942265	0	1.3947933589439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121573394-2	5.33444040004661	0	1.34105128534029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3149913-5	17.5500249693766	0	1.32302794088364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119337701-2	5.87180614089653	1.71232697820166	0.695363605401031	2.4624915150889	0.0137975437486037	0.141041006056752	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51332872898306	2.6215190179411
Merged-chr14-25315622-1	1.36093705246795	0	1.83086501206632	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33273124-4	5.48724733728458	0	1.33187781974802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46752553-2	2.75886445110788	0	1.36353461472292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150132827-3	4.32294180638076	0	1.31651323335392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47294488-3	6.03409770825973	0.961225984318573	1.11576556154488	0.861494580445434	0.388965704772515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0.733321818366247
Merged-chr19-57623877-1	4.2707079282174	-1.792130035673	0.896787862521032	-1.99838792491571	0.04567461972834	0.347041518128105	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66019199386798	1.03956264035389
Merged-chr17-36930458-1	1.41757287128541	-0.423688712848873	1.5672736505371	-0.270334866348118	0.78690264409336	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr6-82763586-3	14.3301559953597	0.0270991113695517	0.477992549941062	0.0566935852303411	0.954789284043231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59249285521845	3.75565924429662
Merged-chr9-40576807-1	9.038369977018	1.02134300329597	0.68585508796109	1.48915276889207	0.136447144861443	0.775665517887418	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34715830534015	3.08523240875325
Merged-chr17-32617437-1	2.63715197244673	0	1.34870241720864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136612137-1	3.91306114524246	0	1.346533519927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38602171-1	2.92946706520173	0	1.38846689274057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93366165-3	16.5270368122606	0.0147359085483087	0.371521553632454	0.0396636706652206	0.968361265480769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00550767396639	4.9726804847219
Merged-chr10-42118734-4	7.53659659616563	0	1.30159035408384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64371808-4	7.92858229544791	0	1.31135009849542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113197426-5	11.3972150867803	2.45105847278066	1.17268224379649	2.09013011474063	0.0366061131445388	0.296120706801564	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.916190436775555
Merged-chr1-105746700-4	7.66093750379164	0	1.29356907357235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126802763-4	7.22235988753735	0	1.30178520622903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-112927035-3	8.66432068855487	0	1.34692306795853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10844217-4	9.83217862037124	0	1.29385008653699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44571095-8	37.8982674100015	-0.0394118642825673	0.355567567037552	-0.110842123793605	0.911741541182653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38469468488655	4.33478804568624
Merged-chr14-20885280-4	6.30149676999029	0	1.30790776008026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157518397-4	6.35132423561166	0	1.30404388130015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115311167-4	8.75520964668586	0	1.29526308158859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101356906-6	23.8123366437206	0.937394249927798	0.315272513266713	2.97328251110424	0.00294633127748705	0.0438567115395601	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12367654756375	5.09289557728619
Merged-chr14-100224410-5	14.7256453337468	0.260317087782714	0.44700282927339	0.582361163587854	0.560323435055399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2781536553251	3.5340327709466
Merged-chr15-27884561-4	7.66478692737275	0	1.29675127601172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68395025-5	15.8416353961396	-1.18622243858633	0.495145082169736	-2.39570679645707	0.0165883538594008	0.161981854646803	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2242499800116	3.23403801052056
Merged-chr15-27659787-4	8.60711117573637	0	1.30071911089216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155511609-4	7.18080100643069	0	1.30411005612441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44087943-4	9.69355742459859	0	1.29218586279118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87521363-10	87.859998646608	-0.0248690019684778	0.26068401067281	-0.0953990308200815	0.923997885862256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1985136638732	5.24553215979733
Merged-chr1-43535827-3	10.8192027094267	0	1.31285952558262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51327593-3	5.22576774612444	0	1.32904944717167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24985208-1	6.14176065954458	-4.06443250222333	1.02228133486796	-3.97584536036578	7.0129687331884e-05	0.0023993165174813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18042796885102	0.61242769162773
Merged-chr2-133020684-2	4.45531616613041	0	1.36038934261939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128769751-2	2.69934218698883	0	1.38916231706441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62854713-4	11.7444181571897	0.637482064008862	0.756095792835582	0.843123411146247	0.399159426745226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27730043871497	1.9094343094868
Merged-chr1-136726900-2	4.52986544956301	0	1.30568857548636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14804984-6	17.7880066795438	-1.02808171325366	0.623985711979514	-1.64760457413714	0.099433841189174	0.618112993374026	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5809079943891	1.72298046804482
Merged-chr9-63678312-3	9.02273518871119	0	1.30592031375426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108013284-4	6.47492212222427	0	1.30107668254497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146829704-6	33.9762394986222	0.853112152747473	0.397811525803552	2.14451341253687	0.0319917719104159	0.269329338734609	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65931646690365	3.56604224162272
Merged-chr7-110786874-3	5.35650178012365	0	1.38261142627498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100487509-1	2.78040338564556	0	1.36596713812029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53856398-3	7.3932154236205	-3.5382319297537	1.04495088512159	-3.38602701823827	0.000709124015510987	0.0144671926061758	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21939865324214	0
Merged-chr1-61690901-1	2.65515449595789	0	1.35398479278421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9395743-3	3.84261949498179	0	1.42737206633567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49797099-3	3.56943556479282	0	1.41948995987133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166793256-3	4.37901376546906	0	1.36676421515895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87322749-5	19.4647801337378	-1.40444074777592	0.562932408236982	-2.49486568409591	0.0126004816430713	0.132017167460019	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.783137173524	2.173597744938
Merged-chr5-105306194-1	2.43546999240636	-4.11862500966664	1.40555954575262	-2.93023872386801	0.00338701690365899	0.0485901221924259	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.455576485905	0
Merged-chr10-110805205-1	3.38176089101031	0	1.35934058028519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21113685-2	6.24307576239176	0	1.31211964098944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61127707-8	32.6271044152637	-2.24307452688018	0.437578681501432	-5.12610559358989	2.95796750777802e-07	3.03917208747268e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09076266969259	2.38863282318632
Merged-chr2-84296550-2	6.568237846053	1.95415731135137	1.27078229385741	1.53775931628666	0.124107474410134	0.726666453902691	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr9-55311756-4	6.87118156470385	0	1.29660949432007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35290398-6	36.7232591829633	-1.35690294164382	0.4648753635688	-2.91885319804221	0.00351321628737199	0.049777673788944	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45115228598328	2.66904529407455
Merged-chr12-70234568-5	22.7217484780234	-0.809806916982868	0.412522229291889	-1.96306249574219	0.0496389127176134	0.36873857361058	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26513721645487	2.98811808740116
Merged-chr12-41300490-1	3.45687427287278	0	1.35028190517231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72818745-2	5.9502839130334	0	1.3177746301703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65523551-4	8.10840156015655	0	1.30518690959608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10910662-4	10.8430564341537	0	1.29085031363327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105213442-4	6.43702403276308	0	1.30441253063011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45082714-4	9.23657270577691	0	1.29117365927148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87017804-7	35.7369601821597	1.32590218894265	0.474089192964928	2.79673573795373	0.00516217366455042	0.0667947071920613	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23726775038401	3.12300468900511
Merged-chr9-61708009-2	7.39902225921732	0	1.30098390401124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107059699-2	10.6795965298333	-3.51886151158917	0.827114086922188	-4.25438469399472	2.09624645476831e-05	0.000912600405285076	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40414857654945	0.989878296978726
Merged-chr11-118232337-3	9.37607763165722	0	1.29606965076913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83310144-5	13.2258819224957	-1.42007994325009	0.657863411195992	-2.15862429659736	0.0308793262293343	0.262363860587971	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00233980399804	2.23836617526991
Merged-chr12-35553465-8	33.1656819871298	-1.13995178484133	0.312212990865805	-3.65119907944928	0.000261018807997907	0.00669146136815663	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68939058493372	4.53294328262397
Merged-chr16-14365697-2	3.85186120266446	0	1.35216608427171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99057270-2	8.99058965638303	0	1.37898847645296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98181516-4	7.84178296099338	0	1.29929120181434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119600286-2	5.07342636887926	0	1.42046687834909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35507365-2	2.89326641109291	0	2.04715051767614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12427730-1	4.08501820551745	0	1.31739760999334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108344608-1	4.15921026034222	0	1.34119493578818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-33900232-3	8.8759422480693	0	1.29277557020129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46745990-2	2.5207769188259	0	1.40334739052534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113121004-4	6.99691501120354	0	1.30359933737608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61269035-3	8.5412856768618	0.571923626148678	0.848615374185516	0.673949168900692	0.500343630768802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27668327414694	1.60230598860646
Merged-chr8-107505258-1	2.17292819726855	0	1.41503572414704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36159115-5	12.6111151424646	0.82989034231425	0.703040919365995	1.18042964421281	0.237829377448147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58156846201657	2.00485567764722
Merged-chr7-101311442-6	19.3638206151269	-0.583529284344124	0.422409095329701	-1.38143162823865	0.167146286690629	0.894613911875323	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40672452843507	3.65865761409864
Merged-chr19-46528830-4	15.830108377272	0.82504125842691	0.601534340814802	1.37156135975439	0.170200029642162	0.906712712668678	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42113910442065	3.67236814559369
Merged-chr11-6508663-3	6.7982164599968	0	1.30101141758361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113172622-3	4.41872998954454	0	1.30793770351366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103795821-3	4.57163633589951	0	1.32882550342216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87416853-3	6.06620913647559	0	1.30366585995546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21139250-3	6.26546611094388	0	1.31316872661026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155210575-2	6.97978463446942	0	1.356281872824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25068274-6	22.6089801549913	-2.19277342897811	0.476115812999239	-4.60554631690338	4.11384405243074e-06	0.000248680160453413	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83354775960812	2.48354130786014
Merged-chr9-118811126-3	6.40887810046471	0	1.32796102657923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124291032-3	7.51807979108819	-0.835259534711121	0.740386620295229	-1.12813969325656	0.259260928024928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99055087665689	2.67983564697698
Merged-chr13-60892519-8	33.6262528270709	0.371891584704746	0.32484404674871	1.14483115337013	0.252279107578278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01958023025773	4.38812438867324
Merged-chr7-123394243-4	7.60338187105675	0	1.29745238148851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94140261-4	6.22241704763833	0	1.30432996233917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125561021-7	19.0824488881232	-0.267097177807568	0.428741184588016	-0.622979987481786	0.533297672979033	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82972296446092	3.56331334317101
Merged-chr16-33130918-2	4.81962135375636	0	1.32070561656319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78484576-2	3.81288738070338	0	1.32902161162823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102002302-2	4.10465550926887	0	1.33281095390077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5025571-2	3.24256257256737	0	1.39196978084072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84200128-4	5.51121646545189	0	1.30965631872912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148889145-3	9.57396600110807	0	1.29413906221207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-10755213-1	4.25261836876287	1.83622346523453	1.24778373010828	1.47158792098947	0.141132189348698	0.794283355884936	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.581381506691384
Merged-chr18-34502664-1	7.08040110377858	1.18082548171165	0.757762094286932	1.55830634788196	0.119160644899421	0.706825654096187	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76712827072918	2.56821354400587
Merged-chr8-39406309-1	3.02137852276466	-2.51253095817419	0.948700475249802	-2.6483922204346	0.00808756330910517	0.0938453032543887	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46799996475712	0.989878296978726
Merged-chr13-104094963-3	7.20460817749939	0	1.30562206649123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129234614-1	6.1969178406327	0.916904924136721	0.719897792383624	1.27365986371592	0.202783986554862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9835927540664	2.41617016553618
Merged-chr5-140616329-3	7.51987280966848	0	1.31000712213491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67597779-4	10.1532830288824	0	1.34216989494067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59253134-4	15.9172884172994	1.34015713491949	0.599115766169736	2.23689178384902	0.0252934136837527	0.224476899440243	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85234919500544	2.50780164191679
Merged-chr8-26435581-4	5.60497053657027	0	1.31303922548134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9987536-5	20.646837070154	0.0974161472631494	0.553156293689283	0.176109624665808	0.860207819714225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41059388586668	3.42326374714895
Merged-chr17-57342505-5	15.4146568924053	0	1.2788436366632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118423553-1	4.18035547290254	0	1.35627618162337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111604234-4	9.40378289893072	0	1.29402812891393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191259305-4	11.8737320414873	0.765344215005484	0.827314683394612	0.925094441531181	0.354916784149985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28251659749223	1.21171060354126
Merged-chr6-5292983-1	4.80306892194168	3.6222950398448	1.08369282601368	3.34254777081923	0.000830130652874426	0.0164033013736717	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.72320011534497
Merged-chr4-46531028-2	3.82815169367703	0	1.35362519144049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122994706-5	17.1253486758414	1.55479646313269	0.607957000480358	2.55741189245986	0.0105454268610827	0.115582264955436	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97425965922403	4.52835950398345
Merged-chr2-129314115-8	19.4413470433808	0.107882341285193	0.3447420933454	0.312936375823143	0.75432900061585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33648106686204	4.39310335761965
Merged-chr17-26462751-4	6.56530343153388	0	1.31953756391293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4247487-4	6.85388489684869	0	1.29142549062253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66106175-6	29.3143078217369	0.719358550685417	0.419928332792822	1.71305076249838	0.0867032011589552	0.556558758641135	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96668700603421	3.75564801713187
Merged-chr12-117736186-3	7.52284958781359	0	1.29693487537677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152430054-2	3.81056715194883	0	1.35130710221955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99199247-4	9.17186045917984	0	1.31124535031156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23594804-4	7.62373435130909	0	1.30201443020314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-17520250-3	7.32226199121895	0	1.32205551303306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134624274-2	5.5390590493769	0	1.34132797760477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85420997-4	8.97682075155923	0	1.29902200634427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73571282-2	4.69013646158483	0	1.32423735061497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-195040627-4	4.89607640328245	0	1.3147220741908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101974660-4	7.46982448264443	0	1.31008348064291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111086315-3	5.73398573113987	0	1.30887333698945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100210955-3	8.35358409453513	0	1.29837898303439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117962141-4	11.2556738908699	0	1.29103575567442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147058816-4	9.08653311193635	-2.5239608505172	0.687608289418498	-3.67063761353383	0.000241946165152764	0.00633422039586239	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11804923236011	1.46928333126936
Merged-chr2-83625837-4	6.60803686924713	0	1.28733770071432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86110293-7	28.816835953194	0.417090238288354	0.35164792649584	1.18610179916215	0.23558210012064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87556693032082	4.11281138698766
Merged-chr8-13156073-1	1.85208495179646	0	1.54964516088851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87336897-2	3.90794494856632	0	1.34999532200062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54981152-2	4.52591469637739	0	1.30361498618181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125551507-1	6.16912360464863	-1.33586394435031	0.94108153448538	-1.4194986251439	0.15575369740865	0.851634265824252	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12978509060964	0.733321818366247
Merged-chr11-68030845-3	7.41382056331398	0	1.37082967772159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123986316-4	8.20309174495797	0	1.29344403067475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87848806-1	2.25059937341429	0	1.42309831993313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54639858-1	3.11419562248538	0	1.32263271384425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84845854-1	1.57190725586337	0	1.46427567035727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73527409-4	11.3687739415868	0	1.28688018682353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41972967-1	1.42609341779206	0	1.4270043703165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73742069-1	3.11497720018831	0	1.36495755110578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44794592-1	2.71587510190388	0	1.38473232449052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113614796-4	13.2998350973962	0	1.2965636399483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69702712-4	7.97395218793793	0	1.29291969936057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69669338-2	4.93709338561954	-1.32155307640855	0.937855603603223	-1.40912212000565	0.158799061149181	0.863301451734973	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27203169451987	0.73596151290311
Merged-chr2-28796537-3	5.36149259992166	0	1.29889948408768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34716690-1	2.01457470011456	0	1.40033485408369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40928785-1	2.34488187239118	0	1.40869160640859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87151659-4	6.53612649958839	0	1.3016953236938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24405498-1	1.40591994165194	0	1.54711093005823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3420696-3	6.60662624869686	0	1.30401345553281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140508071-1	2.05854515997561	0	1.42247479675482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15754012-2	4.4299035988633	0	1.34717120252487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48619241-3	3.9564037532637	0	1.37220509819719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132870253-4	8.02287179139962	0	1.30348182262596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102930833-4	9.23285198292568	0	1.30034996546862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48750051-4	13.4797238529243	0	1.28129539502028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51328712-2	5.39861558388349	0	1.30060429556708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52094698-2	9.50162194323886	-0.295107866222674	0.482043631270393	-0.612201566577983	0.540404405235986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87432417253379	3.47364774258589
Merged-chr4-130878690-4	6.02498948680476	0	1.29406766778593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54917748-3	4.9916207445547	0	1.30924940494352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82570880-3	6.72785533570642	0	1.29778262446448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91345294-1	6.36352769388166	-1.01343451800668	0.848639604500146	-1.19418715863914	0.232404765119061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3874645198534	1.19664257419518
Merged-chr8-127781216-4	6.54343576908809	0	1.35436542282084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3166650-4	14.9418709124855	0	1.32043201333422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67405815-7	34.9216401388841	0.329321822868666	0.312653799505031	1.05331143709119	0.292198278806621	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67392939861754	6.04242668086828
Merged-chr19-11055854-2	5.98722285177738	0	1.35164251356007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81389571-3	7.78977335812111	0	1.29863233005837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58552887-4	8.87962688462279	0	1.3135833760244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73084520-1	3.10387295609141	0	1.37431019020349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91975588-2	8.86434007770375	-0.993348567860614	0.842605355744015	-1.178901322059	0.23843747124461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81174158295336	0.989878296978726
Merged-chr11-54563004-4	5.78450403371505	0	1.31549534707356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52424659-4	5.47576396499043	0	1.31034709918823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40580490-3	5.94718086688417	0	1.35570766097212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132096028-3	6.02344328105958	0	1.31846521011746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103549700-4	5.61255618692813	0	1.29628647441594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62880478-6	15.5544434844624	-1.00450607095676	0.612750771366071	-1.6393387293782	0.101142734355818	0.626303342708355	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18615726686597	1.96275318189595
Merged-chr12-85526268-3	6.04008490206728	0	1.29940985585923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64821032-4	6.82796357927242	0	1.32014559646375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88701831-2	7.11040983506478	0	1.31129998968518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100624992-5	12.5458274290806	-1.5145872987382	0.614460905822804	-2.46490425084093	0.0137049869220249	0.140414875416532	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19876736551248	1.40264952818025
Merged-chr17-88403564-3	8.0599661217016	-2.27125714413715	0.680945036007685	-3.33544856638256	0.000851619059865392	0.0167738787260782	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13521751514934	1.7913447488181
Merged-chr9-32725263-8	29.0582884432795	-0.38822202108953	0.399007740678001	-0.97296864574571	0.330568885547344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05329772191427	4.53328327800559
Merged-chr3-149460916-3	5.25472134926585	0	1.34917591496954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38343590-3	4.74761650053303	0	1.33176576795273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21419417-5	18.7098310902402	-0.697014805319939	0.699966166509189	-0.995783565934381	0.319355316893706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26100673578177	1.57597341069752
Merged-chr11-109413286-4	8.24365870797123	0	1.3362487663427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120905617-3	9.29369274747224	0	1.3022441265494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144699768-4	5.8700784721141	0	1.30499224437505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113322239-3	5.39305177010977	0	1.33603600301472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139214739-4	17.178628151645	-1.57842047641141	0.430215447994864	-3.66890701802567	0.000243589646280266	0.00636195404709443	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96399882494387	3.31883733653069
Merged-chr7-80784417-3	7.20745914550736	-1.46709177233571	0.863787885239208	-1.69843985705985	0.0894247749139	0.569602431184687	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69255564361938	1.15692263537643
Merged-chr3-65397396-3	9.00100649534692	0	1.30300854538452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-90797863-6	18.8655247768871	-0.400393781070957	0.434296145603729	-0.921937219853418	0.356561323420783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86000355932728	4.0171029178545
Merged-chr14-70303071-3	6.24459060827084	0	1.3336595178987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-94052960-4	9.57161465071159	-1.52605803233356	0.77415869105867	-1.97124704528817	0.0486956251691444	0.363914035030068	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68299278987354	1.6995072319729
Merged-chr7-83649050-3	6.23281872148451	0	1.31936544791439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25389360-5	16.473917666547	-2.76975120345196	0.851930354199293	-3.25114745565695	0.0011494022722288	0.0211633814824072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46786382645905	0.581381506691384
Merged-chr3-69241334-2	6.24250050702157	-1.50096451006552	0.913321806400271	-1.64341254040716	0.100297607245474	0.622180315460674	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34233921749774	0.683637474991079
Merged-chr8-71637582-2	9.21023493302845	0.0115485156044825	0.74261953881152	0.0155510527274365	0.987592555219462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89195205867727	1.22548804685604
Merged-chr2-91132263-3	7.63159048703996	-1.54447979604807	1.03250987378382	-1.49584990445471	0.134692773264348	0.768500302255486	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54528766689241	0.469435083901436
Merged-chr4-141638356-5	14.5968411574631	-0.96981476536333	0.576995123127782	-1.68080236121606	0.0928013098733215	0.58578325060314	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68403743219778	1.8134253095212
Merged-chr9-120028084-2	6.02244551155031	1.95457295810693	1.28826362819338	1.51721504460074	0.129212399111296	0.746949171295715	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr10-19958344-4	6.51451660037516	0	1.3257363108853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25289381-4	6.95789499137273	0	1.30291532318286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103578989-6	15.4692664210262	-1.89364334750433	0.516911424676697	-3.66338072076606	0.000248908151761608	0.00645698772727831	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51706934188942	2.49164944546238
Merged-chr7-73594641-4	6.06005198300216	0	1.2970469060309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4876771-8	28.2272824914484	1.26715262935407	0.38099154215105	3.32593375222931	0.000881228705354159	0.0172409493952314	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43309346899477	4.75580760445739
Merged-chr11-100725614-3	5.98074391515046	0	1.29648606351462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62751267-3	5.88329005406496	0	1.29888537053784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117123345-5	12.7887166468325	-1.44696137533098	0.483051691346908	-2.99545866674511	0.00274032437756684	0.0414128669695843	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52182326060672	2.6203855945659
Merged-chr5-99297765-4	5.67440862670029	0	1.30519423139032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51567704-7	13.1323225019973	0.767913527880513	0.833456886798413	0.921359628846941	0.35686269884773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11898428729156	1.40000983364339
Merged-chr2-167948132-1	2.97758567351831	0	1.32638105022798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88235480-4	11.8870216144286	-0.624021074811173	0.681713165753497	-0.915371898563002	0.359996425744949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12153824925685	1.41695929335733
Merged-chr2-6646888-2	2.97489519263787	0	1.39959259598093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23874673-4	11.9151300291898	0.548890847967925	0.424373443505111	1.29341469493087	0.195867670392781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73241057193729	4.10869930021495
Merged-chr1-193649574-1	1.22519624084647	0	1.70395251620043	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124928565-3	9.13665765044962	0	1.28583699379995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68709379-2	4.22071456754135	0	1.37991140402217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123798037-1	1.17701602034297	0	1.59571499734564	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146630622-1	2.59714749909711	0	1.35541766224435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94987755-2	1.73491046024597	0	2.10356542673163	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35874632-3	5.18235755281863	0	1.30331381126379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20873524-7	22.5872727023975	0.233398292188241	0.354669740717062	0.658072187710071	0.510491746313352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42853522797525	4.34648662140201
Merged-chr12-35039812-7	19.8324633025694	1.09792437389046	0.366119716221865	2.99881247920866	0.00271034065678412	0.0410642060185985	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23716459331337	5.40472178296657
Merged-chr4-150569417-3	14.6228006987637	0	1.28199760838568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125272207-3	5.01949906583855	0	1.31356556246796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102154973-3	7.83087781386019	1.39259261045067	0.806099368692108	1.72756940960039	0.0840654511322236	0.544434189265241	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850037882615877	2.12456390572862
Merged-chr11-106657085-4	6.43339674024685	0	1.31221254072257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32409115-2	4.66369222995799	0	1.31844171594055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133729672-7	19.0674508832526	-1.2354902695543	0.561512843317404	-2.20028853170135	0.0277864304338632	0.241582235648114	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02738747176801	3.09173243208522
Merged-chr16-76192059-3	6.18784066029885	0	1.29793497080108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129612843-7	21.4320523223293	-0.326643670077723	0.400348936981123	-0.815897433226167	0.414558800316009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38810397887252	3.85862352439693
Merged-chr2-5393105-4	9.14007628916394	0	1.31710813621102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25881888-4	9.95870094157282	0	1.29298992565766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14188162-2	3.21299644777934	0	1.33241247128836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85190122-6	20.5278881258811	-2.10738705754067	0.546427462847039	-3.85666387732527	0.000114945046882302	0.00353301930083297	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06256259496587	1.98531404180197
Merged-chr5-123058967-4	12.5196855382567	0.0108710107750048	0.488112399649816	0.0222715316857427	0.982231357671645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17032975819828	3.775126420381
Merged-chr13-23730619-6	20.0788981141503	-3.51890934498363	0.82397742687376	-4.2706380420331	1.94914530796292e-05	0.000862932583293663	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1510609803224	0.581381506691384
Merged-chr8-83201153-6	26.7139060669623	-0.178324721525233	0.346088823876975	-0.515257093620054	0.606373377240286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46296981345409	3.99512545696385
Merged-chr8-126779592-2	5.22669074716559	-0.414662195934402	1.30827955571521	-0.316952286017888	0.751279807216202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr19-53403974-3	6.02697714375337	0	1.3155433596309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52011508-3	5.4698129178729	0	1.3298739375956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144240651-1	3.04644722576773	0	1.35926355837429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54722139-6	29.024534098819	0.649456971406586	0.324400720344002	2.00202074372057	0.0452825005718886	0.34507641776917	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55404031170011	6.18834398277778
Merged-chr13-8644968-4	7.20686710358554	0	1.29845279503395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51919621-2	10.2549190074465	-0.372037564918241	0.541319675362684	-0.687278851759778	0.49190702303651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01041877862985	3.63735264930219
Merged-chr2-150838133-4	7.13965815252175	0	1.30619219581362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125376139-4	8.51755519358705	0.227355641718627	0.656360895333303	0.346388158306071	0.729051023238533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46272347362324	2.74280221675353
Merged-chr5-109796522-6	23.2059637461976	-1.13033023762609	0.42259365462327	-2.67474493585036	0.00747861241399034	0.088276265680024	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4893874807434	3.19595557655358
Merged-chr9-48423441-2	6.37693526410084	1.07610943462942	0.808542294330803	1.3309253482158	0.183213575675588	0.956481130949667	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14953280217139	2.03169262342392
Merged-chr7-53433585-4	7.84897906296095	0	1.30161363308072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83555185-6	14.8190889168051	0.428284303078394	0.452108391764627	0.947304475828806	0.343483650765649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33390464678476	3.67270221175047
Merged-chr17-87550755-4	14.4123954297518	0	1.33316360498445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65607693-4	6.60958085280364	0	1.29834245121363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-89607644-3	7.55467390780522	0	1.32141604453518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45882479-1	3.23324045679242	0	1.34161740072422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101740165-4	11.4367333906166	0	1.28271221374615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8595549-4	19.7896699990963	2.14672297163691	0.390781917451102	5.49340405932555	3.94259332513396e-08	5.6374770989979e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93787642265279	5.00742356755174
Merged-chr7-68667875-4	7.34414555861218	0	1.29723310504843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68264100-5	14.4912558705967	-0.0317563770706314	0.553374319073899	-0.0573867922237111	0.954237083942367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59710380972462	2.97407124760784
Merged-chr9-86583889-6	14.7609582747822	-1.20516152406062	0.404607745259209	-2.97859232350717	0.00289575776830905	0.0432714811634858	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62965659014991	3.23542210307899
Merged-chr7-19472650-4	16.2525817614887	0.0896804702685967	0.549543156850558	0.163190950793669	0.870368090919457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63213234217342	2.41016391054307
Merged-chr9-114788057-9	34.4394207446056	-0.0651448672942573	0.378792246147185	-0.171980466751541	0.863452885460765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72077077973049	4.35284904128349
Merged-chr11-113339983-1	3.49285728248819	0	1.33196353434043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41468477-4	8.13489343156543	0	1.30149124093711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63129882-1	5.27775383688448	0	1.31203961600931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57820646-4	6.72801623112484	0	1.29802280565869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-68969258-1	2.68932024057571	0	1.35103879450396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14846873-2	6.03823764201943	0	1.3387773058465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55832217-2	4.44920318143193	0	1.32405052386111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74673800-2	5.39744027618718	-5.08844912631319	1.09803474569658	-4.6341421765166	3.58420607687145e-06	0.000223486193033628	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80145321173385	0
Merged-chr6-115506749-2	5.13228589963407	0	1.33410527329321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84387499-7	26.6487901477532	1.40825573229531	0.450729134556512	3.12439472917795	0.00178171262942592	0.0296427325264668	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35125322587116	4.57646640264799
Merged-chr11-54972559-4	8.00974508632247	0	1.31377158947252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41603476-4	7.79463053154642	0	1.30474513704034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25261189-4	7.70059692182589	0	1.31425152451484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135630072-4	8.37780631054294	0	1.30572370137191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70679979-3	6.16265838097448	-0.428979387931915	1.31575110928258	-0.326033840979103	0.744398751410197	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr4-126440822-4	6.00854953864925	0	1.30331845932406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87993005-4	7.16801736272411	0	1.29409890036833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9503150-6	21.9502297852478	1.19271296891609	0.434073247039612	2.74772282569915	0.00600107163483009	0.0747942069520517	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14989058889728	4.37840423555108
Merged-chr1-171658585-11	49.9875358522729	-0.463735539895378	0.23397016604814	-1.98202851127594	0.0474760497004915	0.357292403976543	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71272620012961	5.2265403934018
Merged-chr11-20133148-10	41.3127896123103	0.753774842354069	0.309425447448142	2.43604670711641	0.014848767069075	0.148410451651235	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57818884409855	5.34061579336028
Merged-chr3-121891738-1	1.6262499707056	0	1.56590900857322	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6086595-1	2.23806522791059	-0.404503021027913	1.42760365446824	-0.283344063852641	0.776913102559445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr16-76532944-4	8.47778120219241	0	1.28877284374537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117233418-2	4.83659539992483	0	1.32436810747838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151071087-1	2.29945089422989	0	1.34812055827385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68319091-3	5.00793220335715	0	1.36903604653325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31087753-1	2.72937703181126	0	1.37806993523969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49252602-3	4.38868163851151	0	1.3260053407035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87422524-2	3.06404952690313	0.832438006569413	1.30684204828997	0.6369844065384	0.524135000777651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.469435083901436
Merged-chr2-163100693-2	3.88652888399227	0	1.33668314079836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118095814-3	10.6614157268944	-1.46178939508764	0.701266281895379	-2.08449975826118	0.0371147321885411	0.299013597533277	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03520847371558	1.57403368136583
Merged-chr12-103544313-1	2.22886632816012	0	1.43073715281089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184534272-4	6.99859368159083	0	1.30252699121619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34642618-2	3.38288938318157	0	1.39738792387139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105693972-1	4.54038577315554	0.376871966348184	0.720012788799703	0.5234239894217	0.600679233659877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84908804270238	2.75541628522075
Merged-chr10-44029736-1	2.11018129073765	0	1.41561110864425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135002231-1	4.28163733735788	1.32068304503842	0.85632244543647	1.54227306790407	0.123007250704654	0.722130249262985	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95390405521129	2.8746476554
Merged-chr6-37161067-1	2.57357763627332	0	1.40576441736602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125106406-3	6.65755516129459	0	1.29761542113465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61452686-2	3.99961790004349	0	1.34163138902711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103648709-1	5.39326830348737	-1.36524112179845	1.04350102627846	-1.30832753147109	0.19076224084695	0.98448502530286	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4963328883486	0.73596151290311
Merged-chr13-9428107-1	2.67201105133919	0	1.33207359170561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102828518-3	9.05181233888236	-0.881559547516081	0.767284388762286	-1.14893455468074	0.250582967807639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62872448415828	1.46928333126936
Merged-chr6-87038333-9	28.9922923382373	0.749078499634376	0.360963570247252	2.07521911178259	0.0379662321332022	0.304260657956369	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39510201883931	5.12055183409164
Merged-chr9-116156718-7	38.859306976004	1.16649962482135	0.241720219828507	4.82582559973237	1.3942447709591e-06	0.000105571632448544	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19607960662153	6.29247589309506
Merged-chr4-132336054-3	7.20764333196277	0	1.30673322040215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37776938-3	6.77159774052864	0	1.30342714730803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24467862-4	7.66333820891556	0	1.30187623071425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86587107-4	5.1138212694214	0	1.3308005441194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44428132-3	5.54997539506028	0	1.31751004817689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57094384-4	10.6427040020405	-2.51189526427094	0.740405653153657	-3.39259330823835	0.000692343472507556	0.0141765166063919	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87934575989636	1.41293295987929
Merged-chr15-38458454-3	4.32894721680241	0	1.3140313005716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93332550-4	13.0877514196182	-3.73415690476627	0.758826662270493	-4.92096165096949	8.61200056890851e-07	7.17805853540683e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74378160282865	1.03956264035389
Merged-chr19-9954260-2	7.33300243811385	2.48791051941881	1.22643955387502	2.02856350446142	0.0425027689561089	0.329999609656332	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr12-102694998-4	6.79711113545513	0	1.29694279386747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115216997-7	22.9935055223685	1.05596540520229	0.293967080943947	3.59212127361852	0.000327997136448688	0.00802144493951196	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29978675506393	5.27217740187685
Merged-chr14-120323293-4	11.2190648793962	0	1.30250885826812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125144404-4	7.41116081932635	3.08985508870173	1.03322387521636	2.99049911913302	0.00278521932615313	0.0419361617711526	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.9094343094868
Merged-chr17-5589126-3	5.64647013890067	0	1.3029996683462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144309510-3	4.84980887538706	0	1.31403408216613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57836879-3	5.89852896595675	0	1.3160762496899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40491572-6	13.896266891931	0.357534890047258	0.366037302248862	0.976771732964463	0.328682173159145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02450963771173	4.50118416102536
Merged-chr4-137968371-5	26.9981361398741	0.675825505866413	0.446067799226202	1.51507350909161	0.129753789454204	0.749151009513557	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11588740836756	5.51739806237955
Merged-chr16-38475765-5	12.3196314393623	0	1.29228696560837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41245300-3	8.90018758582141	0.036873895202764	0.794271678871949	0.0464247891289961	0.96297167894262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69660617509399	1.15868211970568
Merged-chr2-71663595-1	4.2822418131851	0	1.3593516109244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-6005890-1	3.67467408383247	0	1.32290196152146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123202004-1	5.18847925188032	-2.60307005771463	1.101172112488	-2.36390844645822	0.0180832808175102	0.173315252706498	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59471394247552	0.469435083901436
Merged-chr7-145025635-3	4.34590446502246	0	1.32744824786973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31090053-3	7.21237834211638	0	1.3017314708009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43420531-3	7.8251083435739	0	1.33841809942296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103241830-3	8.89511500921516	0	1.31822066252854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46106045-3	8.20645381278073	0	1.29444574911964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27668007-2	4.74613222645655	0	1.31554749682979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165682193-2	4.69815153380136	0	1.3121692292457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74981595-4	5.33262470941189	0	1.30605152642358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67537570-4	5.97345277107781	2.45734923018139	1.19940321072209	2.04880994832586	0.0404807026017779	0.318911043221477	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr14-54449167-4	8.17807093182242	0	1.29160387993966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44087818-4	7.25487382504057	0	1.2953989129334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34741970-2	3.71743279003196	0	1.32702931780691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84885371-4	8.57912379579652	-1.4900708513475	0.773611984558727	-1.92612172651055	0.0540891763559276	0.392391086108303	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78410168089753	1.37490486545505
Merged-chr6-49012391-4	6.48350642217441	0	1.34603783453165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43715505-4	5.92485058094313	0	1.2941364944926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45666360-3	11.139040893753	1.97823010315943	0.813270694432769	2.43243746110781	0.0149975812212262	0.149554698990119	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02329261010354	2.37475311282297
Merged-chr9-64087708-3	8.48894439350959	0	1.30629822520974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81039938-4	10.404395519552	2.63195422577829	1.01020500841021	2.60536643935302	0.00917760471070691	0.103812142123661	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.35700371934843
Merged-chr13-5424599-2	6.28441140531434	0	1.31560600401173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39010186-1	3.47388906676193	0	1.34321946015928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66332389-3	6.1257837654054	0	1.3097486455002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125630522-2	3.84774849873769	0	1.41414091937226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135614813-4	7.50021097541489	0	1.29340129323553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91723228-4	11.628642122592	0.59172396690182	0.458366813465724	1.29093980959873	0.196724549750689	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23752189169284	3.56796468413454
Merged-chr16-33535117-1	2.24751361368986	0	1.40779809738242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119370058-4	16.2394292364078	0	1.2809300029242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-70957100-2	4.78361567824033	1.08092429942734	0.811928575651614	1.33130466378751	0.183088784271752	0.956135195158788	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25690326960338	1.7464719987851
Merged-chrX-57282413-2	4.29898160672646	0	1.34347869471299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67892904-2	6.15138936450102	-1.05612011974713	1.11422468639334	-0.947852020013764	0.343204793644612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77525393237157	0.666688015277142
Merged-chr13-113920158-2	5.41345569939275	0	1.39277432910547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58860868-2	3.45069212557204	0	1.45357028165562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126919426-3	6.9246722485201	0	1.32449899019747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53995713-8	21.5474136133108	0.522090338538841	0.341923774082288	1.52692026151184	0.126780840607338	0.737527617313781	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10495212788062	4.72362481942329
Merged-chr16-96345296-5	11.138871698449	-1.51956403435873	1.14811657190103	-1.32352765524729	0.185659965705965	0.96631908554536	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.985703315538194	0
Merged-chr18-9732225-8	28.5413594293814	-2.33025927504872	0.438391157758077	-5.3154796437173	1.06376742135787e-07	1.31156501728398e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5371711828393	2.65419093112727
Merged-chr17-70974374-3	11.9528184500404	0	1.30434179319808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93988725-5	11.0989435216529	-0.16093851443288	0.517840561489789	-0.310787772147225	0.755961966096584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73498472210004	3.07680635199509
Merged-chr1-84582008-3	6.47217772222644	0	1.30568956710188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152808438-2	7.32642178991199	0	1.31575856913622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38029408-3	13.2654999825389	1.33925778728284	0.451019240690778	2.96940278031518	0.00298379211462571	0.0442285137713026	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69292786453162	5.05915894960313
Merged-chr9-118762232-2	5.19555474715299	0	1.32216660015916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113479421-2	4.05505980764045	0	1.3211504781941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89834630-4	12.4283748882646	2.37947268270857	1.0934431212145	2.17612844833269	0.0295456572500575	0.253371459142029	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.38860239282551
Merged-chr19-53449383-6	16.5431317524017	0.172650973846127	0.424282629504622	0.40692444573493	0.684063480849203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29535204671273	4.74929055207468
Merged-chr8-83081904-7	20.8633787610951	-1.7520707955908	0.492019853604321	-3.56097580769535	0.00036947912840309	0.00871938718838149	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68434574816574	2.57387282706098
Merged-chr10-60933643-4	7.04849665272321	0	1.30199042817629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41349816-2	4.50358976013242	0	1.33237483163048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41918618-2	5.60523855958019	0	1.37691491380758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-36862529-2	4.07281623996367	0	1.31300141204447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4313420-3	7.37268138865165	0	1.29986479571621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134218056-3	6.05988634973417	0	1.39794164937375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-33667329-1	4.06798859046106	1.32937917003893	1.10617669172245	1.20177832346922	0.229449425965784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	1.29606516661881
Merged-chr16-21389289-2	4.09251623347953	0	1.36287193421941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140767077-3	5.19436323099811	0	1.30362291387417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46180839-6	24.9604677371835	0.146040383689328	0.400009818944159	0.365091997178488	0.715042734540148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44555879893402	3.61587672272493
Merged-chr10-121483792-3	4.61410889585565	0	1.33267937218851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19276282-3	3.87737838549113	0	1.35061352066173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4847244-3	5.63696063165571	0	1.33384824203779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123620978-3	7.50345129801578	0	1.30212855054749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120630178-4	8.09934990933721	0	1.29161371411394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16989772-1	2.25615488310343	0	1.42915150017606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72835799-1	5.36662229943514	-2.38258410600982	0.935250980049599	-2.54753446597133	0.0108487135971091	0.118074623370535	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87504001545289	0.825079211029734
Merged-chr8-68196191-8	26.9936113566429	0.213475128827107	0.379683740086597	0.562244590138146	0.573949384772739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05174748487967	4.90229496219891
Merged-chr1-58669877-2	4.37385211845905	0	1.33686286707414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100683008-4	10.8194257126722	0	1.29426448955011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95354314-3	5.75714847101846	0	1.30483573972905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108650726-4	8.1701586422209	0	1.29252504134901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72965461-4	6.38415492757876	0	1.3098189821437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126610035-4	13.8048289083187	-0.283646644206866	0.600272073468398	-0.472530135489967	0.636548436919581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81598732954623	2.20458646825563
Merged-chr1-107503501-3	8.51385107555511	0	1.29673790322733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115661296-4	10.9094599013407	1.06546166362969	0.759754545825472	1.40237616146419	0.160802948092029	0.871295973965318	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37190029311979	1.92063322615843
Merged-chr16-49909737-2	5.48139698666205	0	1.32307914505722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105145943-8	23.5820236263332	-0.794480197994393	0.322412325737124	-2.46417439587023	0.0137329274308752	0.140590925254265	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03277747210867	4.22732265919336
Merged-chr9-59598773-3	8.32447110138476	0	1.30890971045321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150898914-3	6.34196667727598	0	1.30117977716843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78609023-8	20.518340949369	0.238004499859967	0.388191227913402	0.613111484098404	0.539802627254787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3907211446152	4.79988838083183
Merged-chr13-34684015-3	5.5560571778498	0	1.32847760637683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23124606-4	8.59777147884939	0	1.31199367294304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65679156-4	14.2169130070289	-0.779120855404575	0.508452527304928	-1.53233746232777	0.125439181100914	0.732470673484748	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6442396957577	2.44984116557272
Merged-chr12-119207405-6	11.7297472045228	0	1.28666766849032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78702567-6	26.2840644239196	-0.696449982954685	0.318090174883196	-2.18947341963776	0.0285624484244846	0.246785899080572	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31146584535229	4.64485884352751
Merged-chr10-88622740-4	23.2478488741247	1.33099234122291	0.357064379632852	3.72759764665265	0.000193313671763849	0.00532333552257923	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37615606467341	4.64961261172176
Merged-chr2-117169278-4	5.15756251474387	0	1.31131341199608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115676921-2	4.62352158959272	0	1.34456043524309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61204116-4	14.0560713118739	0	1.31908886133349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45494205-1	2.71855795996535	0	1.34133913170134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100711109-1	6.19105056064052	1.30924776202477	0.645063886149605	2.02964045908644	0.0423930991688269	0.329395892780757	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41908596820549	2.95390865298081
Merged-chr9-121599656-1	3.4700625279135	-1.12685757827678	1.07573134576629	-1.04752695244189	0.294856608050998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03895017171947	1.04220233489076
Merged-chr7-123082419-3	8.87131761047919	0	1.33057553131413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55517261-1	2.80549519448909	0	1.34992834910415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77483164-1	1.55249956437469	0	1.49244394923302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45523171-3	3.56753400364105	0	1.34279481905305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25496320-1	1.45830153834522	0	1.75465089196096	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28720912-1	3.93300495614246	0	1.31336566913491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89866640-1	2.12654487379832	0	1.47930578201877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141373944-2	4.03955698252802	0	1.38000408843056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112084627-4	7.12350815875838	0	1.30399929240192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37622734-4	10.8045898031028	0	1.30368404579576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47634928-6	16.9744632544238	1.05928629697901	0.408270414481002	2.59457031273154	0.00947092394248401	0.106337971811952	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99809414968228	3.99189002990826
Merged-chr10-63223273-2	3.39629705408887	0	1.35129546409569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82781066-4	8.84430384698236	0	1.29475756244782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118883402-9	29.8645621478851	-0.302337351564994	0.297015264414176	-1.01791856442569	0.308716658426206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97382681753453	4.68576419204952
Merged-chr2-58801331-4	7.41726181099563	0	1.3083028581228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134507517-4	5.90587255773811	0	1.29933744906473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167926862-4	8.38084489708667	0	1.31675082514205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3760448-4	9.8347196079323	0	1.30279941572562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102924709-2	5.66088553425546	3.75400363306249	0.971827735264084	3.8628282532422	0.000112081809353266	0.00346398712759736	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.70085612784947
Merged-chr13-99334244-4	11.4719891683776	3.12285536076751	1.08780117843654	2.87079608173977	0.00409439556965201	0.055926499350853	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46402698790757
Merged-chr5-103927617-3	6.61055713363502	0	1.30392632563813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145023147-2	8.50589318792903	-0.0832640620986841	0.798969357671743	-0.104214337257341	0.916999256440247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52953005153913	1.162043158134
Merged-chr19-46511212-10	74.0802555255593	0.987991139084681	0.356454587213366	2.77171671939598	0.00557615398796865	0.0708181897454789	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67992797564547	4.73996234780265
Merged-chr8-123026079-3	9.68463761073572	0	1.28752686347507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55019605-7	27.1052905452566	0.657291220992426	0.305675575627308	2.15029028617524	0.0315322602857672	0.26604352235426	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39471267660972	4.96206503899834
Merged-chr13-69528661-6	12.8808270306457	-2.78581966243012	0.599704716840015	-4.64531891146239	3.39551509397304e-06	0.000213760432881274	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8986991034497	1.52696130946871
Merged-chr9-63916126-1	3.32671647600912	0	1.3115750110758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104764093-1	2.34010479506445	0	1.36574546188934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48525572-1	3.21330181001214	0	1.4028797060605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6209748-4	10.6220162715402	0	1.29074610105697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103389922-5	15.513124401354	-0.0747902166054485	0.49398648695437	-0.151401341090443	0.879659131620931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20855531225017	2.76252157376252
Merged-chr4-58581419-4	10.8174227412005	-0.910832493022758	0.544303894500759	-1.67338963072859	0.0942506178221995	0.593343051272587	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52380208457297	3.30483543417642
Merged-chr5-90601715-2	9.94034940464473	1.69054114829086	0.456266542907005	3.70516132416797	0.00021125623213069	0.00570680022522203	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26240127877512	4.81396986371403
Merged-chr4-47278579-4	7.10512324549832	0	1.31970059587717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9647437-12	44.6977434308227	0.045115778133882	0.251635458245468	0.179290225822912	0.857709821168618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19321992924155	5.33971842698292
Merged-chr10-8834038-6	15.9192549528836	0.20255045511491	0.398181702493509	0.508688505389601	0.610970580700978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61456365446473	3.7882466979231
Merged-chr12-70494985-2	3.57970351350553	0	1.35291751543458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51278668-8	28.4645331410777	1.07020007089503	0.314146487043519	3.40669119354747	0.000657554778646282	0.0136166838717133	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38426713801572	5.51435024073547
Merged-chr4-138210150-2	6.76768578256152	-0.850362772750168	0.710960162332584	-1.1960765424046	0.231666690709218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75925062296336	2.13923004754663
Merged-chr14-70800591-5	12.8500767562442	1.53626700586	0.56522973325473	2.71795150798916	0.00656874644154632	0.0803221004807795	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97851231904531	4.60228562605818
Merged-chr5-29574465-2	4.43746400163064	0	1.32863265860514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49819788-3	5.12030945461545	0	1.32881544027434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58563778-4	11.7297697047854	1.46423366951028	0.548041737293901	2.6717557621438	0.00754555460975738	0.0888417678431001	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77186677622592	3.27028269168757
Merged-chr4-89124053-3	5.39202694268693	0	1.40459501212597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153784838-3	7.55985881442413	0	1.29684361895779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-162652617-1	3.07773087771692	-0.248715909272298	0.884792643261262	-0.281100788039506	0.778633096761084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80093038046909	1.31734301959449
Merged-chr5-92485068-3	4.92065135250404	0	1.33164333349745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73591498-4	7.92197682252992	0	1.2931811273194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37146230-4	5.5390203760507	0	1.30515373336935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-130311836-2	6.49423572212997	0	1.2969290384906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107626910-6	23.1727059298261	-0.575835471674069	0.388919467074821	-1.48060336502335	0.138712298158476	0.784583557124883	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11351661070289	4.56053296477528
Merged-chr19-21897544-10	50.9814326666847	-0.531093024642085	0.315927405549461	-1.68106031738022	0.0927511992397355	0.58559612227244	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30518182069375	4.53222213120823
Merged-chr14-25646263-8	30.2983787645597	-0.937814654025087	0.360909301718346	-2.59847737245896	0.00936382162142236	0.105407112432983	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90245473603139	4.07449107677057
Merged-chr4-136506042-5	13.3528446258373	-0.20002767519254	0.460221429950902	-0.434633552839727	0.663828436444036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41707237974194	3.12567676862636
Merged-chr1-172455548-5	12.6218361584978	-2.65788750171999	1.08103087747184	-2.4586601151818	0.0139456575037331	0.141923833552242	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57017813302013	0
Merged-chr18-39442501-4	9.63548448595449	0	1.33136830570138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117343987-3	4.39585308229698	0	1.32513947726986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5751938-4	6.34861670740859	0	1.30023304306105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49552948-4	7.14238458342736	0	1.30309200812329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55154698-4	12.051493336388	0	1.28725284440672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5382611-2	4.1553249857898	0	1.32880767818275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148899574-2	2.54415618399021	0	1.38443996619956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118871341-4	12.5805720812449	0.00430915942247947	0.501781657512508	0.00858771810002253	0.993148076535874	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18125731935595	4.05201757098006
Merged-chr19-3379267-2	6.77617965683917	0	1.30247756768277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23889803-2	3.23333510779186	0	1.435391264014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67108267-5	26.9597257452429	0.548347474673373	0.498071618993028	1.10094101684009	0.27092232894751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62930342565766	3.39904314295633
Merged-chr3-65510204-2	3.26636552072066	0	1.56997204423962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13506560-4	12.967364648229	0	1.30595118965031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159555081-3	4.78736571786033	0	1.31444323332884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113691189-2	4.10779020898679	-2.42934205562599	1.04735457719693	-2.31950297303108	0.0203677801140471	0.189919086662745	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88176042337963	0.581381506691384
Merged-chr3-152105571-4	8.83040089923248	0	1.29840229542935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55567420-8	21.0552998715736	-0.453303905408003	0.373880558011818	-1.21242973375918	0.225347924798087	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78079457448281	4.19777134616639
Merged-chr10-84390917-1	2.44642813194638	0	1.33394005218566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144584936-2	5.05851299402191	0	1.33613902857295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51418756-4	7.29741762570207	0	1.29437908861342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126624366-2	5.60613312647257	0.760795293762708	0.84817751108759	0.896976498218122	0.369731457870057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49082296038008	2.09311265642062
Merged-chr3-65930623-7	21.962997968325	-0.63713691486971	0.368834313608408	-1.72743394896322	0.0840897579947865	0.544537640068112	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38345805606888	3.76097956172694
Merged-chr10-51595363-4	8.25632474849124	0	1.29594837014972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92053228-3	5.84281528970712	0	1.3099822863441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161077439-5	16.5107544985038	-0.209336257306289	0.503712109431064	-0.415587104988862	0.677712164174827	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6423597675894	3.18454616723382
Merged-chrX-11665852-4	12.6443679861339	0	1.35177380836516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23053574-2	9.81559394845552	1.57536686533859	0.641649870201278	2.45518146032573	0.0140813487790097	0.142815430282968	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17948835751966	3.94210488929397
Merged-chr15-64186935-6	23.682918427312	1.16604684603604	0.357497012378662	3.26169675734508	0.00110747545465157	0.0205477260248897	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37004216735113	5.52409376978967
Merged-chr8-53626332-4	10.7732903397682	0	1.30451498637234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30200520-4	5.43439245213805	0	1.2998619497698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57681934-4	15.5602472858721	-0.672531763647562	0.386557203092867	-1.7397988144228	0.0818943507476492	0.534078667061466	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76611156090721	3.96427913759488
Merged-chr4-105496360-6	13.6477242360807	0.036813057738584	0.560685646934731	0.065657214412106	0.947650736824184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72446251628604	3.52033376980431
Merged-chr3-27291166-4	9.09650101184227	0	1.30134392815599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34530244-3	9.71873781946286	0	1.30444679115916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27856395-7	14.1249855621201	0	1.30214207105269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62542818-3	8.87246557276467	0	1.30377684282775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69951296-3	5.67545624824188	0	1.36757243974832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11102062-3	7.83893302056865	0	1.2971642118675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46483798-3	12.7763642613697	0	1.29424907598471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21855482-3	9.06247373262377	0	1.31761152673908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-48063510-3	7.73726509736403	0	1.35672180092674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164520918-8	29.1906366316414	-1.55070005550245	0.391073231689236	-3.96524213330638	7.3321479810419e-05	0.00248123532868547	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25274510562147	3.69823178714803
Merged-chr8-70626301-7	17.9076196666902	-0.104563793549371	0.456803421895546	-0.228903262404372	0.818944104854213	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66763817527935	4.15880057145915
Merged-chr11-106134856-4	8.47960698183999	0	1.28896708879006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157014148-8	50.1795584866283	-0.769216691472237	0.290547188833588	-2.64747593862561	0.00810951305102872	0.0939679337435918	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.84410559829218	6.06018719144988
Merged-chr10-19077066-2	10.8148300435331	-2.61386226851736	0.637234131520628	-4.10188679360272	4.09794768827682e-05	0.00156398555276971	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60589921251246	1.428339764855
Merged-chr8-92858672-3	11.8713064010722	-0.525595516420622	0.46763329055589	-1.12394803157797	0.261035073156344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06377355424723	4.41329937577049
Merged-chr5-139470607-2	5.27926753911366	0	1.34276460826044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101417982-2	6.25346377900113	-1.39130600744136	0.710527187743331	-1.95813197783497	0.0502145283190348	0.371905085292491	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19604666435944	1.88893749265627
Merged-chr16-57223118-4	12.3001898298167	0	1.28539577524703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69871782-2	4.19843703907769	0	1.35773593771632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79161616-2	8.82387808738871	0	1.31196113777971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101472952-4	5.90232075909033	0	1.31436774771565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70970370-7	21.8590487602114	-0.438784893339646	0.45709422931853	-0.959944066661745	0.337083366305563	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28554642719489	3.6363913622003
Merged-chr2-91508587-5	16.1071684560765	0.978851470308255	0.545538673608068	1.79428428755445	0.0727678046944526	0.489805468030124	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51701364243886	3.42905166322265
Merged-chr14-102898635-4	8.84111621522829	0	1.30142583081533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55437305-4	5.7382844626636	0	1.31488821140622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101364047-4	21.8796640934861	0.400928645467881	0.535423394878788	0.748806737439341	0.453973698312502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62388166346252	4.94008262894992
Merged-chr10-51528109-4	8.47436756425388	0	1.29179502676627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76676578-1	3.72619349543116	0	1.33347038963282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101806369-3	6.59775085176433	0	1.30156323536525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63841802-3	6.5944455658083	-4.95326602179537	1.22061147917198	-4.05802018604273	4.94904909889601e-05	0.00180396022822384	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64366336671998	0
Merged-chr6-108466220-3	17.0068806994345	1.97291318622338	0.645731116322423	3.05531689019346	0.00224822839182878	0.0354442726333455	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5021802100616	3.98729642696172
Merged-chr7-98543045-3	7.9044277263633	0	1.33713036630298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128610916-4	5.42433998437928	0	1.30481466113044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16978086-4	9.87321151103808	0	1.30836352698734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63875620-3	8.9699793735362	0.00808177416722738	0.533233174688554	0.0151561728543009	0.987907586637656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45885505784567	4.26045799108389
Merged-chr7-58676995-4	23.1419504675729	-2.4656698215041	0.678363154050086	-3.6347342964946	0.0002782672723619	0.00702614110500801	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83838266693793	1.19664257419518
Merged-chr9-65525885-5	13.9084502543263	0	1.31116137965412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70829814-3	6.4304575718436	0	1.30934255140766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67782204-5	10.9431608290009	0	1.28973229264122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4591846-4	6.1345444729378	0	1.30853420314553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93263638-5	17.8522852367377	1.1277570973764	0.433944909175796	2.59884854858276	0.00935370316862661	0.105329499785813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46278914472618	5.50104429839793
Merged-chr10-88409975-3	4.90553296378586	0	1.32327470201032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180858947-3	8.99185057196455	0	1.31450749473331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9943231-7	26.9904450245174	2.01941836184811	0.581580556434707	3.47229345875635	0.000516031916257798	0.0112514586585859	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43722846218652	2.77812499375419
Merged-chr2-91081108-14	46.5858129309616	0.249703655695951	0.311164708312604	0.80248064457584	0.422274980253847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14600088292327	5.22694844860196
Merged-chr5-151686868-4	10.8257612796983	0	1.28655136340024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75535286-1	3.44360888567014	0	1.34311925644321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-96616024-3	5.38776505848328	0	1.32051015582946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116965448-2	3.29700684589025	0	1.39544295958026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17727313-1	2.38900718521923	0	1.40608682446764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73445342-2	3.90820000181536	0	1.32583280792522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36803381-4	9.2150914956825	0	1.29559442686029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99155476-1	1.88323780495498	0	1.45646896824903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94536517-2	7.99079033698797	3.04772206271014	0.843890540764041	3.61151347892914	0.000304415258961382	0.00756074477844563	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.832882082720823	3.39874278573185
Merged-chr11-69260931-4	4.95727167353979	0	1.32999573897176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80769796-4	4.10004860231327	0	1.34128351492164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35131776-2	5.53358090603877	0	1.33199051867896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108695504-1	3.43101274268933	0	1.34818073780825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19219557-1	1.84964260624145	0	1.42017161410475	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167333627-1	2.66388374943968	0	1.37291234200442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53067147-1	2.17077600464893	0	1.43788206089812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65001197-1	2.83082804684147	0	1.36679109162544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56593428-4	10.4843573911862	0	1.28550630131585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61629867-1	2.56982913249372	0	1.53326085374178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136249927-1	2.5767979812854	0	1.37269178111353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25524345-1	2.39054275158411	0	1.41176201336766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170576574-2	4.97142223664845	0	1.35057131696749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12376903-1	4.78543337859045	0	1.30512491155289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155582433-3	3.64042101252331	0	1.38353049845332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24505341-4	7.32508314975388	0	1.39805341237334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93888651-7	21.4826305568085	-1.12221261564172	0.446466058761942	-2.51354519255872	0.011952446299755	0.126895947344239	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03776565394372	2.90870545105247
Merged-chr4-128670762-3	8.09054183604171	0	1.30517531397317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40616581-7	22.2957233173622	0.125540317469372	0.325358737573991	0.385851993419487	0.699606286185779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9380217170071	5.0885481651849
Merged-chr15-67101519-6	15.4654595575158	-0.666873826540886	0.454428214945397	-1.46750092667775	0.142239837362032	0.798179855067353	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23937682609402	2.88646578373819
Merged-chr11-29647900-5	13.0317325286345	-1.21769106057482	0.710724801332164	-1.71330880573242	0.086655743244299	0.556466804052866	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89195696873992	0.961728545204858
Merged-chr4-145231922-4	16.7735585438021	0	1.29660622179966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73359731-2	4.83137055853938	0	1.34421632821275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76633920-4	15.1045659720482	-1.91394175627755	0.678141509341075	-2.82233387856947	0.00476755143726578	0.0627711591254197	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47610696646118	1.46928333126936
Merged-chr19-4228480-4	5.90417700162929	0	1.31370254203137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32040466-4	8.88821985261998	0	1.30232104625258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55688755-8	20.75324492656	-0.164353287520068	0.372589654010285	-0.441110711881257	0.659132848995395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85715882567524	4.5785836285397
Merged-chr6-114782183-4	5.47135906963083	0	1.31096454988063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75150848-4	4.80140329727162	0	1.32144098280251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101444456-3	9.97618031581717	-3.42552089382688	0.790704676720339	-4.33223805888584	1.47601219140588e-05	0.000691434704722269	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70428565585217	1.29948469469889
Merged-chr19-21571342-4	6.48953390738655	0	1.29574812264712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12245142-4	7.78538994238084	0	1.28872838219519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14349526-2	4.6533666270851	0	1.33180923677154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34765097-2	5.08432536434845	2.09742969803959	0.860874278856023	2.43639489476531	0.0148344798647786	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.721334244049718	2.71623706106846
Merged-chr14-103857143-2	3.84309335420735	0	1.33957517503687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101148786-1	5.35743228583026	0.304720050430156	0.597608347598631	0.509899253674437	0.61012204484749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38260623017206	3.97763107365733
Merged-chr19-18620406-4	8.79375238096898	0	1.29515506046474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37605886-4	6.04497435827471	0	1.30312457992816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152594928-3	10.1210111795239	0	1.28464744846348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-69971646-7	19.2119290223497	-0.578642029799489	0.401984633869577	-1.4394630566581	0.150019369778483	0.829197183144816	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38433351220325	3.76981640261366
Merged-chr6-115284346-4	11.9261650411636	0	1.30705956878584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75835752-4	7.03978237869652	0	1.32212702833917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64627347-8	28.8689350146469	0.141771422623185	0.303119202249388	0.467708484223789	0.639993073013435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1632490997902	5.2484871270869
Merged-chr9-95575814-4	7.55117359899928	0	1.31911355375012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33646976-9	34.1554582416676	0.467532576052353	0.318468615953252	1.46806483474963	0.142086612486771	0.797594002195734	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38849538092678	4.99078733576743
Merged-chr7-123294047-3	5.06640918341254	0	1.35939894616753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134799492-4	6.09436271444102	0	1.29349137705035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56958099-3	6.89360064156694	0	1.31189504510382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153215616-3	6.85052977596568	0	1.2999485211589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3182964-3	14.9508806018806	0	1.29705449475744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33467303-3	3.99992767800266	0	1.35278102828998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93597924-2	5.72372931943222	0	1.32812948619998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103359254-4	5.88497635168013	0	1.29464286771738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-17024197-8	42.5990397298596	1.14713985741405	0.427349789686294	2.68431127170118	0.00726794043652319	0.0864611024513097	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21592678049603	4.00230025009134
Merged-chr10-95510139-4	6.61562268631738	0	1.30140433778363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191643143-6	16.8710810902393	-2.21703453199446	0.493766335453013	-4.49004796967457	7.12071356007075e-06	0.000384871917532161	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26136380559928	2.97448427177487
Merged-chr17-50124004-5	21.7008479501068	-0.930715801133419	0.381778297951624	-2.43784365462113	0.0147751627962923	0.148059774281018	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39344585885008	4.39341197019715
Merged-chr7-30842185-7	29.4214125650176	-1.31071441247954	0.498520881232885	-2.62920664273486	0.00855843375586829	0.0982708508541503	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58449587909124	2.76014702231799
Merged-chr13-111789673-6	17.0821875691831	0	1.28420486767515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24571079-4	8.34341857106529	0	1.30274739795567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43656678-4	8.11621861045269	0	1.29635492857931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176849058-5	8.22917785098345	1.76579452748097	0.832210418703779	2.1218125702287	0.0338534806325531	0.280521018958147	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.950204084877437	2.06559681884521
Merged-chr13-19855039-9	29.5343476987913	0.416188948672615	0.35438196640184	1.17440780889141	0.240231718945776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76971795566127	4.12845257292184
Merged-chr11-23987942-2	7.96634196105324	2.64523094649674	0.753401708341717	3.51104983862999	0.000446340709511881	0.0101027294782693	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04790655584953	3.21745867131732
Merged-chr18-60915902-4	5.3102271323774	-0.407139293617012	1.31469124024557	-0.30968434348202	0.756801009951198	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr4-139205134-3	8.40736581946653	-0.357522067791187	0.632971381332698	-0.564831330981247	0.572188494246027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58454907239729	1.9001726754443
Merged-chr7-144990812-3	16.8406844164909	0.0382683151095978	0.566739282657223	0.0675236679027654	0.946164820759648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24619375799943	3.73723010167577
Merged-chr9-56463995-4	8.83641749319131	0	1.29664331622002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34486136-4	6.65376024708524	0	1.29530901215658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79618315-4	12.8814746775344	-0.124281170315806	0.488761673798158	-0.254277651007329	0.79928106440775	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70667215253439	3.76551301165728
Merged-chr5-21213980-4	7.09698366017376	0	1.29666059341603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78447385-2	2.06955832805856	0	1.45526886573883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24436710-4	15.0813257239883	0	1.29426852813675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75155404-1	3.34711177506368	2.3237303801455	1.37504716278018	1.68992776614819	0.0910417748042982	0.577705944490355	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.851599296279844
Merged-chr3-107775883-2	5.7420088888304	0	1.4800857636329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95682537-2	3.96464895477936	0	1.33069367165081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80986213-2	4.54854499571063	0	1.33143862176535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25358779-4	8.29471138939533	0	1.31811509505545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121509361-8	20.9371974654815	0.759822189049274	0.400464363194522	1.89735282058094	0.0577813879928452	0.413060122500871	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66890317323831	4.26453686976288
Merged-chr3-22091936-4	4.93174258239965	0	1.30148352559512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34026909-4	5.37477308671758	0	1.29397078053036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62879674-5	10.5118052962697	-1.07636334979732	0.573794925722021	-1.87586766899848	0.0606734531529479	0.427145816605531	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96994004196241	2.48630020683226
Merged-chr8-126876630-4	7.26966196585479	0	1.30467465553373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132289368-3	6.37086164112897	0	1.29837352080736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55197462-7	17.6476412437589	-0.640766424362182	0.46790010782739	-1.36945132869805	0.170858238922188	0.909935002494647	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05491328970995	3.32602482710398
Merged-chr14-72983262-1	5.61287561422406	-5.23766072814222	1.10282241880908	-4.74932377036576	2.04097962472035e-06	0.000143254408761521	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91356968205924	0
Merged-chr11-100360421-3	6.02417132342926	0	1.30538369856641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25606826-3	6.56211718054178	0	1.31849184198185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119444299-3	6.96656365385026	0	1.30670330292335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57429409-7	22.9145157572979	1.45184408268413	0.308234539492823	4.71019271582293	2.4748266838616e-06	0.00016535789824501	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74108131444371	5.19599999060324
Merged-chr17-31874168-1	5.40404366364083	-1.26390498722849	0.650691711422407	-1.94240216225531	0.0520884337529942	0.38187881843828	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28968378422095	2.90657679739794
Merged-chr16-11460424-4	11.1543209836978	0	1.30070165387383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46480656-8	51.1054033127351	-0.260088878763435	0.27975618239063	-0.929698412885357	0.352527256462623	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07545545015668	4.70625476287414
Merged-chr11-111159514-4	7.72989408264259	0.749027696574824	0.88410728083519	0.847213582346296	0.396876084237348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.855026762206016	1.46928333126936
Merged-chr5-66363453-2	3.26063473353038	0	1.37338320145638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83013707-5	13.4790833592483	-0.505238999413834	0.549781294654044	-0.918981792081087	0.358105095993501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58979956323799	4.10273233636347
Merged-chr12-85510734-3	7.54060207088133	0	1.33319015155095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14997802-4	5.60285553302903	0	1.30536467510371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84180283-3	8.25588772313789	0	1.29480323269847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131979837-3	5.88664656674591	0	1.31799052231544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40027228-1	2.42983375463429	-2.01082193767236	1.10272174254967	-1.82350801664889	0.0682264840148244	0.4665474910457	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62343013112813	1.08186277552917
Merged-chr13-113417634-3	6.55220274650511	0	1.362870052146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67348906-1	3.00073458410497	0	1.33205838377818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26600819-8	23.8372159894043	0.497080163373487	0.31515829958473	1.57723964124844	0.114740394847423	0.6868199534603	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15362935883726	4.60003474374116
Merged-chr9-106361286-4	14.9204646408743	-1.3786075035971	0.496385092795061	-2.77729432975997	0.00548135179041926	0.0699442323953793	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63159228882129	3.41035392788822
Merged-chr1-78678689-3	6.94680112562909	-0.411354679844149	0.56772015722765	-0.724572968930536	0.468714046981365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49074022884492	2.96894117841462
Merged-chr3-97971343-1	3.77290640392364	0	1.32889771799171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4595188-3	5.89199033261419	0	1.32987718367698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-29231805-4	11.2658738696341	0	1.28385452488449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45110652-3	5.81019260797528	-2.24084949966842	0.757551203452383	-2.95801721316818	0.00309624833664147	0.0454668413047582	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55193750654504	1.48219169541115
Merged-chr6-97280911-10	51.1367542179263	-0.193375663041337	0.337258897907185	-0.573374532862747	0.56639112994881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08121443409259	4.72887147957609
Merged-chrX-36108469-4	9.9175163902514	-0.41901076662746	0.431390144131141	-0.971303522641636	0.331397155138002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51084756148663	3.31487371029928
Merged-chr5-125314136-5	15.767034880904	-1.92617393008059	0.435281487270502	-4.42512256185979	9.63875439500237e-06	0.0004905405332522	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88424271123756	2.69422113745304
Merged-chr1-78666172-7	22.1546728362243	0.0249776996972284	0.432556539339285	0.0577443580794801	0.953952259983443	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88584637623914	4.0039555254242
Merged-chr13-44504738-6	19.5784447502207	-0.816575120493798	0.535379302905356	-1.52522728477263	0.127202417365567	0.73918800935263	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43953684432763	2.81960882153758
Merged-chr19-11803202-4	9.89542930755961	3.08298484769346	0.658176542815605	4.68413054422268	2.81150787011632e-06	0.0001839046979786	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.99855343444056	3.92526139965934
Merged-chr16-45657775-6	47.7023781653371	-0.15261456507527	0.403223994567591	-0.378485822102254	0.7050697241494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85392425134652	3.01192432211591
Merged-chr15-103550233-3	5.1458200313656	0	1.32219267170484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47378897-4	7.64870383307985	0	1.31007452093716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67585081-4	6.61289686003599	0	1.32098357150749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36089658-4	9.18750605826953	0	1.32156360967474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148698794-4	6.60599217350131	0	1.31272125656617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153260800-4	7.03217441169318	0	1.30627552688526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32531622-2	5.37179327685589	0	1.42979556515429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105504099-2	12.4425681271373	2.04713703051232	0.671118177617786	3.05033762873013	0.00228584241593584	0.0359236792957536	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40302942883946	3.59474803539537
Merged-chr5-21295845-4	6.93058841404133	0	1.31448245938682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24433628-4	7.42936466045797	0	1.30910174341854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44484050-4	11.9639200637742	-1.61043136086466	0.676053953701751	-2.38210478919131	0.0172139982491049	0.166671496456661	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21005113044011	1.29451429493117
Merged-chr17-30027885-3	7.47052386664834	0	1.30921379584273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46099129-8	14.4291983066981	0	1.28320801801639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88702340-2	4.22746488874985	0	1.33066825613881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84647826-4	6.88249621415216	0	1.31598715663937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-50972308-6	22.3068641878989	-0.853169388460141	0.501589478485827	-1.70093158858843	0.0889558341307103	0.567334368251551	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19316919211061	2.30095837608674
Merged-chr3-61605683-4	10.9837099708334	0	1.288069825371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41284589-5	26.4238694612078	-0.484997287631995	0.517197460166834	-0.937741046670158	0.348377504145866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01354340368532	2.30740926016447
Merged-chr12-16887525-5	18.3829695599064	0.730748367233206	0.366906424742259	1.99164778252803	0.0464097167549299	0.351159418071946	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48356991032267	5.26416534655507
Merged-chr2-3703964-3	6.1140509040214	0	1.29551655806319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117883785-4	9.51695866253365	0	1.29369767814787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133525650-6	16.6882640672721	0	1.27997061641556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-42009875-1	2.40762300461831	0	1.35700050875894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82922631-1	4.00468054348281	-0.885211742275722	0.849480435849706	-1.04206254189983	0.29738268373307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35444079398549	2.59845936419852
Merged-chr11-79658384-3	9.36234042975504	3.39570464448115	0.792895913762344	4.28266129960022	1.84671169078679e-05	0.000825411916184363	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	3.41960043867959
Merged-chr9-56105245-3	7.78913883646612	0	1.30641906018139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13247058-2	2.50496503364459	0	1.44806656672787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68434204-1	1.48522975426934	0	1.74164760026958	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-118759732-1	2.79944068139028	0	1.36693849651791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52703893-2	2.12863426506869	0	1.4491241448349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-71338833-3	5.3770911112477	0	1.39255525185664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100466773-1	1.99489520805095	0	1.40060672844688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103394713-2	3.2286461510216	0	1.35957902326642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58333609-2	3.47983179722904	0	1.39499248059959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132021192-1	2.36108872810505	0	1.35691637531174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34206700-1	2.34311987332591	2.32318655624884	1.31597278396906	1.76537583797285	0.0775006214125492	0.513418046109534	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr15-28081443-1	2.03084891928806	0	1.39504895998459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72689696-2	3.76283131126448	0	1.36387225623866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4865282-1	2.0152259832761	0	1.35402319254544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135333904-1	1.02036364355398	0	1.74527956526522	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101516720-3	9.35678542860382	0	1.31300273437883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63007652-4	16.3273513807423	2.26303508629898	1.1267433387948	2.00847434227531	0.0445929098911461	0.341934791099135	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.963545719069792
Merged-chr8-120321953-3	10.324882842217	0	1.30104415850696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47691807-1	3.64093742750116	0	1.32396088685256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25675239-1	1.98129020941779	0	1.39838596351897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46828944-1	2.58028971418714	0	1.34013860714741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29772839-2	4.8017149900404	0	1.36707399730899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39907267-1	2.35552512994997	0	1.38546480319607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31614927-2	3.86708798167228	0	1.33416563966245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139003731-4	7.48849984881546	0	1.30722253570776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148454313-1	3.16672493242661	0	1.38705627093496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95667198-1	1.68301987539055	0	1.49799154016518	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34416176-2	3.1414038594235	0	1.46204341006153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140111285-1	2.63700709905408	0	1.43333263870053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72322506-11	149.50863339501	1.90119577043573	0.24455813447876	7.77400340613427	7.60436929598539e-15	1.08025025220752e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14773476274298	6.89691728184439
Merged-chr11-87443554-8	34.2972819284751	1.00438826747137	0.39438825486306	2.54669923631501	0.0108747114357331	0.118318164082487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48203768635486	4.36025064077761
Merged-chr18-4971028-4	6.62285839445654	0	1.34482817727733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73567181-4	7.41905068732483	0	1.29051702905528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75702867-6	23.5803088732504	-0.505109687120851	0.760892429854259	-0.663838497141573	0.506793683393257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79069558266414	1.29684500016202
Merged-chr18-46452291-5	14.7400862190884	0.975138827274081	0.470807481997655	2.07120503509529	0.0383396392704222	0.306538855715772	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55089785336244	3.43221677169889
Merged-chr17-23700160-8	31.2964060228162	0.713170568117903	0.356633919203723	1.99972725451981	0.045529723514415	0.34635451836705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49086998927535	4.24915577791171
Merged-chr9-119963447-4	6.68967221103508	0	1.31194525278584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117328944-3	4.78650783472456	0	1.31714732942626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37048723-4	13.9635719231264	0.436163964933781	0.61089546810863	0.713974792257292	0.475242766978505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24363616985735	2.84812292246362
Merged-chr18-84859653-3	5.19523355565936	0	1.30690703906517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12350549-2	4.87845417940393	0	1.34175749506783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10294740-8	31.6052551355299	0.757292568673704	0.366174436537897	2.06811970773751	0.0386287679442903	0.308096603208543	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56328981391947	4.17940345299234
Merged-chr18-39572326-2	3.75283777415874	0	1.33952012076103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118178596-4	9.29207710108659	0	1.28466577560259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31191178-4	6.72009671008558	0	1.32814795539749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45526561-3	4.36912732078081	0	1.33015705479521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43383575-3	6.39837569272889	0	1.32127852368288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33270768-3	4.33483372411514	0	1.32408497419164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70729199-4	15.0802954206184	-2.52431656193355	0.537205735474747	-4.69897544876866	2.61469880676987e-06	0.000173110545316296	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83588915549897	2.11916498288763
Merged-chr16-29451888-4	7.23659770813505	0.196204454896013	0.677773921127423	0.289483629835804	0.772211305387448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57970714240099	1.56343534314907
Merged-chr13-107118319-3	6.55747753807094	0	1.31754051096807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13646902-6	15.2878872872104	-1.0301978224829	0.535389977901395	-1.9242007975589	0.0543294192086361	0.393658925607021	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39913552306879	2.66397071612377
Merged-chr2-73513425-2	6.11886312850485	0	1.32163251356818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78372813-4	5.66061544756419	0	1.32308547090369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78388320-2	3.91202313890274	0	1.31744973413784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125088766-5	19.0882555775153	0.465010300329319	0.498353404278326	0.933093456043926	0.350771717583053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52839641799177	3.21837701399511
Merged-chr16-49783547-4	7.34872422658967	0	1.29480251743249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99026457-4	7.58788618067181	0	1.29570612023301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77664275-1	4.0421368527099	0	1.32808041789696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49458417-3	5.156458798796	0	1.33217683817756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106817777-4	7.56435969031232	0	1.31809939576103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61137647-1	4.20782350607103	0	1.37353369392397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149110308-1	6.21196118813779	-0.278707265630496	0.709647925125574	-0.392740196599853	0.69451137869512	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.484566336913	2.19098220643956
Merged-chr5-113012210-3	4.42195646416207	0	1.33300484117495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99639285-3	8.53288007746808	0	1.33009141134453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131253798-1	3.96162606765599	0	1.38321257473089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113172619-2	4.06459663144634	1.49266597000637	1.06783727011602	1.39784029999646	0.16216102949013	0.875967151612964	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	1.72320011534497
Merged-chr1-161139635-5	17.8841651068014	3.42934879364584	0.609474305976527	5.62673234953061	1.83655353270961e-08	2.97795104586705e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31925312226969	4.47506129215157
Merged-chr1-177713816-4	6.33322626923962	0	1.32077816224411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96747029-4	4.28296652804086	0	1.33349767225196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84197462-4	9.87680367180144	0	1.32444549979693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32560546-7	34.3733687804967	1.71909139386863	0.404704747510172	4.24776680887693	2.15911956634022e-05	0.000936229775594348	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32170348488449	6.01709825299976
Merged-chr13-91640452-8	31.4664000129252	-0.566729305487713	0.311782541941708	-1.81770698884632	0.0691089289950008	0.470808181203849	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.55463905468781	4.89201975437834
Merged-chr13-28858169-3	5.87540540657649	0	1.3310445788969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29892540-4	6.840565364724	0	1.29072199998694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70705548-2	7.38571699014473	-0.478876607782919	0.65138544579585	-0.735166268871478	0.46223823920863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54993004591668	3.21939322758713
Merged-chr19-36766363-3	13.9796012995006	-0.725335220197765	0.798980168862322	-0.907826312173154	0.363969994375067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6328388579942	1.38660038197036
Merged-chr13-103065690-3	6.51777784582386	0	1.29539614147098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129423850-3	6.42007894136664	0	1.30137424496731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82909537-10	44.8042868674865	-1.65383812570576	0.365530487740246	-4.52448750836078	6.05420284384474e-06	0.000339004232248396	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.36604000530887	4.60198216159087
Merged-chr10-96163949-3	6.26018702607171	0	1.30422118010521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41092149-2	4.54237340291699	0	1.3204980699175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142748129-2	4.62662891131001	0	1.38067243964969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20776888-2	2.95600903699999	0	1.36122281545322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36279359-4	8.06810639355282	0	1.28916053418458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13441211-1	2.30449251654672	0	1.44349917762224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53570616-6	47.0570277258136	1.56184337119525	0.437473413408736	3.57014466096481	0.000356784140161386	0.00851823764084249	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86777743437145	3.8504180720977
Merged-chr3-52501869-3	8.07235556628979	0	1.31153956012886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54877705-2	2.66359996571923	0	1.39228172349671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79088550-2	6.98592265112892	0	1.31075878727665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46733444-2	3.53609386184218	0	1.3492483877356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83695979-4	5.82431445256175	0	1.31407986155942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45060633-4	5.85267728496246	0	1.3224245857462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182868069-4	6.23844174691937	0	1.3050403918896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35376708-2	4.71093382543562	0	1.31145224256651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50824391-9	36.668503464479	0.834750320603104	0.319691858777689	2.61110909672423	0.00902490980769687	0.102545949625067	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78652535402834	4.6594182565805
Merged-chr7-125546549-5	19.3238128149275	-2.20428355682033	0.480188356637454	-4.59045607073013	4.42278538589572e-06	0.000263216151026176	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8738176008908	2.13314959900533
Merged-chr13-10210952-4	8.38734476015654	0	1.34092378607236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88696650-4	6.72727692829343	0	1.29588153283604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96517628-4	6.76207378286212	0	1.3059534997136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134090539-6	14.5258735742264	-1.27544781604299	0.622148140968278	-2.0500709269306	0.040357509978341	0.318272006643094	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56462085181266	1.57215779683075
Merged-chr3-79253206-8	25.9277888476386	0.187729473486678	0.421641783956554	0.445234510975368	0.656150289136321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39120168858475	3.30153012360587
Merged-chr11-106994453-6	20.5160669401352	-0.779143201616201	0.39468483236276	-1.97408954621311	0.048371561803622	0.362404044670888	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07421950927899	2.79557489340392
Merged-chr2-58920785-4	8.2687598369967	0	1.30104554685214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42015701-2	6.8376323159574	0	1.30126846667193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138117194-2	11.535794998413	-0.157750213353705	0.490252620706777	-0.321773319898388	0.747624427852735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60423925942076	4.8254110869041
Merged-chr17-5276066-4	6.76390721381308	0	1.30050580583125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72938977-2	5.6639951002442	0	1.31378446650156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94782860-3	11.0125210621333	0.983678516983598	0.708787578952749	1.38783261190469	0.16518802177196	0.886893145239547	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29712879266741	2.604600208635
Merged-chr11-86734387-4	11.0541064873563	0	1.29650995559695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-31951001-4	6.24624745681509	0	1.32090463415566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9444997-4	6.82053557755507	0	1.33726400548763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131505898-4	6.58249664186839	0	1.32755607323539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145889460-7	22.4044662387722	0.411993078323851	0.400706376654366	1.02816701287292	0.303871272480284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33867900121305	4.65555191827631
Merged-chr6-116186695-2	3.37779991501906	0	1.33333168225289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28408514-2	4.84756108859431	0	1.3067592596048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119434557-2	4.9370695362573	-0.961086253560714	0.785910630734907	-1.22289509261632	0.221369322324383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5838221058378	1.2972429702454
Merged-chr6-108307093-2	5.86322718887609	0	1.30126327616522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83947679-4	6.89564136323415	0	1.29449283246378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88407203-3	6.33500782210219	0	1.3141691540195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12464844-3	18.6132015962234	-0.794041438264758	0.416026370555216	-1.90863246770885	0.0563095204899801	0.404892575879807	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57916215714961	3.72512413206444
Merged-chr9-116350938-1	3.39035976093528	0	1.33296483705645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61774933-3	6.5322541650153	0	1.30390286336335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125667274-3	5.84009458993066	0	1.31407372288539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52586799-4	7.35045721473189	0	1.29999496638204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131430232-3	4.6325176868571	0	1.35969987228672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45754062-4	5.39235705217463	0	1.30862712107515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51913974-3	3.40638437778137	0	1.36068109058389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50972752-3	6.62200644157706	0	1.32872626390338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151842281-3	6.19250794221958	0	1.30340825999807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86666017-9	20.1145087181895	-0.869037549296751	0.509972456333365	-1.70408722766131	0.088364792411417	0.564446307420963	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49420826235683	2.7871976115512
Merged-chr4-138091991-4	12.8807042875122	-1.09879777718534	0.49065708629104	-2.23944136931017	0.0251272121714428	0.223700654844019	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73643417977136	2.39401765632919
Merged-chr3-30593893-4	6.77648989702882	0	1.30476276792059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34703299-3	6.32205874872557	-0.56929988566609	0.920593123678534	-0.618405537716015	0.5363080483541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76721462351199	0.961728545204858
Merged-chr11-117317146-4	6.62054861947649	0	1.31399431248057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16108978-5	13.055325414604	-2.04103921127547	0.601397446007235	-3.39382753423087	0.000689230835873937	0.0141230724995354	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6416768643773	2.37850366884776
Merged-chr6-122560553-7	24.3148652922781	0.466110932043235	0.357378271762448	1.30425089847953	0.19214805081124	0.989625400985599	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37697810268793	5.0815688083911
Merged-chr12-85963848-4	7.10013088548979	0	1.3073928454213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72078318-4	15.8988174165532	-2.13231382658765	0.637430994785726	-3.34516809510405	0.000822327155737268	0.0163085126498783	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39783240210127	1.99186294665078
Merged-chr2-142703089-4	5.62151183639793	0	1.3104324105519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88581703-2	6.57736746043348	0	1.30480550490296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79396947-6	20.5120443714451	0.235803110452411	0.378838221750935	0.622437486277293	0.533654237732506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71930577514725	5.08236573584965
Merged-chr16-44832463-4	5.92791235067135	0	1.32177300105994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27213143-3	5.41881930775707	0	1.42871506792191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17655679-5	11.3593820270715	0.686937449721682	0.713060261719811	0.96336521132853	0.335364278196155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90839964282244	2.32373923090461
Merged-chr16-91056222-4	8.55632842749836	0	1.29859515010743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113100914-4	9.02717155671183	0	1.30640004912911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25392692-5	13.6106253889513	0	1.28511985115946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13298042-3	9.40645483713389	0	1.29258257993106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71866762-3	12.6549748134676	0.610030839638611	0.557910423715142	1.09342076022957	0.274209102622206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84466919616073	2.68063488395717
Merged-chr9-116182298-5	13.5175852631841	0.957322332458597	0.507023057394341	1.88812386043823	0.0590093243241948	0.418723347517519	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94964601583007	3.73804981657653
Merged-chr1-156620229-5	14.5170113885623	-0.750955274496132	0.729871266694664	-1.02888729665568	0.303532638482478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26489915062507	1.65917935940748
Merged-chr7-80154899-4	8.31423826250398	0	1.30053303901272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131270525-4	13.2076043852127	-2.00085852642843	0.469132346736712	-4.26501932843987	1.99884897195913e-05	0.000878982401895299	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97126149045398	2.32500372216053
Merged-chr14-64633589-2	5.81374908987225	-1.60927222866093	1.06388515499847	-1.51263716868316	0.13037184747208	0.751524236495283	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.716115997188	0.563523181795778
Merged-chr14-50060670-3	9.89527143987004	-1.23317673594686	0.919510053303493	-1.34112371204259	0.179880289773761	0.943794444228457	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38962634194865	0.683637474991079
Merged-chr5-100639107-7	16.2971846901809	1.75666291855697	0.442425571100275	3.97052754927411	7.17136628161375e-05	0.00244072969290798	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21751962989056	5.03248334428773
Merged-chr19-33110038-4	6.82576176615178	0	1.33817297401985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69215841-4	6.9676324294493	0	1.31380359498001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9738336-3	5.88625251051741	0	1.33488404808536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48575868-2	6.988383742345	-2.49027183598356	0.778997010096477	-3.19676687292438	0.00138977199237154	0.0244596554538517	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9776305260564	1.46928333126936
Merged-chr9-96399754-8	65.8055502500824	0.453565664599441	0.308673553961953	1.46940241163436	0.141723673599053	0.796651627957307	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13756038978669	4.55700495079522
Merged-chr8-70600890-4	9.90298910593998	0.644136870713315	0.94887246083056	0.678844520526494	0.497236381463806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.705103018524376	1.03295826569721
Merged-chr3-109419492-1	4.75954030070343	-0.133161609589095	0.978610478906483	-0.136072127224605	0.891764261807061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71792936177395	1.31734301959449
Merged-chr5-43692709-2	4.09305095498295	0	2.08230033394592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46735435-4	9.06014692541033	0.928826053149683	1.09558885718819	0.847787057211861	0.396556572389148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	0.683637474991079
Merged-chr18-46544764-1	1.95400470727428	0	1.47217469424889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57657041-3	6.83319784127832	0	1.30295558895211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34592099-1	1.30376691391335	-3.68666003824092	1.44784563455142	-2.54630738958795	0.0108869273540577	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19418967032899	0
Merged-chr9-119994324-2	6.0579624849497	0	1.31845736411949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21271548-1	3.00695419105136	0	1.43189620988697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44298191-1	2.1981815610931	0	1.39179013693804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33772119-1	1.94997315022298	0	1.5106597148213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-47954032-1	5.90148446167722	1.49982524204536	0.92193012075529	1.6268318045804	0.103772824818431	0.638886283265985	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17514715678456	1.14227273603934
Merged-chr6-16360182-1	1.56988699434924	0	1.68599654300451	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59207126-1	4.31846462562801	0	1.3634478904876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102993986-2	2.62935922800531	0	2.43604482716611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19929168-1	1.91643165671833	0	1.51507090960302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100151013-2	4.78205777864296	0	1.32082168134948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4270826-1	2.28709240226178	1.01169225659761	1.31679529819869	0.76829880694558	0.442309683300129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	0.773587911294612
Merged-chr17-5770803-2	5.97338977727488	0	1.320461295616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120024767-1	2.2543496112325	0	1.41950985370711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154019674-2	4.94905900075224	0	1.3162620173546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5807334-1	2.21552566704357	0	1.36921796141438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38290305-1	1.97984294034476	0	1.46817937660527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124919778-2	8.91221188485906	-0.539250781744922	0.77115258030907	-0.699278969576676	0.484377707233022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90887845781571	2.16544699046655
Merged-chr1-152616213-4	10.4605082008247	0	1.29266262486338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112440077-7	36.6956877694454	-0.16992567314763	0.355418669825229	-0.478100019988225	0.632579017855568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87839231463254	3.75225060332627
Merged-chr2-48690822-4	6.73285197707926	0	1.32117437734942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87960237-4	6.39284519879953	0	1.29349969705868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54848915-2	4.93005703915052	0	1.31673839685771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12135287-6	9.96809989232422	0	1.31011093101322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9612038-4	8.38601261231396	0	1.3080256487534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3722993-6	29.7408862742288	-0.137561263291342	0.394148038581771	-0.349009128109115	0.727082456713524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63964206673013	3.30911195552663
Merged-chr16-26035712-2	3.98509815615088	0	1.36427037813507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8349727-4	8.76229377014276	0	1.29238891590083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69691232-7	21.6546549211891	-2.60918375839742	0.613641141820052	-4.25197005314639	2.11898200837668e-05	0.000921270780568082	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19992036780499	1.26501898168246
Merged-chr17-43032690-7	25.6574813718594	1.93359949616001	0.393225810522864	4.91727512390131	8.77571758414922e-07	7.26816275353377e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00812702803245	4.73142055832669
Merged-chr7-25765242-3	6.65024976806305	0	1.32466741958766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118651207-6	21.0177306371712	-0.731036263275612	0.44586159355839	-1.63960357617094	0.101087619056614	0.626189359642953	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9442445547348	3.11742056194996
Merged-chr15-95793958-4	11.2724008933677	0	1.30038323534013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5273048-4	5.61635795358799	0	1.31749206108159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43496806-5	16.4762265392761	0.0756626051544324	0.510620842753126	0.148177666909327	0.882202556461928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09643614740242	3.30895033782959
Merged-chr6-51171078-3	6.18440657406886	0	1.34810400119526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104401380-8	39.251320410273	-1.19846079557154	0.364613515609011	-3.2869346424796	0.00101284337826799	0.0191896965486518	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20947855151492	4.01749210337406
Merged-chr10-17654531-2	5.24989840850422	-0.504593015455837	1.09717357991537	-0.459902630443178	0.645586112042965	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2005489260835	0.73596151290311
Merged-chr7-118485252-7	19.6779864593044	-0.190366666753395	0.456347928004935	-0.417152473082635	0.67656688587697	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71631469368557	3.62504096328659
Merged-chr7-119880497-6	14.8468577780749	-1.55374619189528	0.741340300611302	-2.0958609569911	0.0360945270415714	0.293435302818925	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36541694409713	0.905469781553611
Merged-chr10-88122773-5	18.1064202059394	0.974976656014739	0.448413785593677	2.17427895247226	0.0296841921090081	0.254400628637821	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75473023720769	5.33558900116597
Merged-chr7-47035632-4	7.31076426829857	0	1.31092582462516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-6624720-4	7.87398704146296	0	1.31112663608596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81520213-3	5.73409684628453	0	1.29940996612919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21508682-3	12.2781494586837	0.237817472092575	0.461912846779282	0.514853556792744	0.606655357030249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9805662013352	5.19041851496452
Merged-chr8-117480682-3	6.6623952488149	0	1.29787868343711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75006076-4	10.2100301521293	0	1.30451182026931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148523058-2	3.68080831814094	0	1.35493960538348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155363581-2	9.52675157145113	1.08855310970154	0.598078524235191	1.82008392809883	0.0687462247474978	0.469057040115292	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4842658746472	4.08645630424098
Merged-chr1-53741897-2	7.67088350523352	-2.80757512343685	1.10369013459343	-2.54380739252606	0.0109651529061641	0.119103869981084	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66346404599999	0
Merged-chr15-50705439-4	10.6370408111793	0	1.28431953538603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145860548-2	4.69477721264607	0	1.3548670806437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15300285-4	12.6345241019752	0	1.28448947868091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109439494-3	10.1241750148714	-1.27109886229395	0.526854600559259	-2.41261794230263	0.0158384121695377	0.156158168495357	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38738150654123	2.76395706063606
Merged-chr4-86686717-5	12.3111264397771	-2.01588125643013	0.652698955500109	-3.08853145763888	0.0020114839684083	0.0325594330937847	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65095344173888	1.31470332505763
Merged-chr4-59368348-6	16.5819377220845	0.289705213176623	0.410881121732077	0.705082803403977	0.480758707607639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50373181414868	3.6688605591006
Merged-chr11-37079658-3	5.58117501061152	0	1.32391972160296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159650234-4	8.11354100003597	0	1.30552080225435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60809736-4	12.3062903126436	0	1.29828926443065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112297448-4	7.63692684081928	0	1.34763612382074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163755996-4	15.1544892409358	0.00935261764205758	0.568204011285798	0.0164599641260775	0.986867441756696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95864518011513	4.89943740148457
Merged-chr9-41143362-3	10.3114387208233	0.851685702898521	0.728996707342556	1.16829842209193	0.242686411628851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47506144566144	3.11214589433476
Merged-chr11-31900685-4	12.373143642219	1.02807727872087	0.683377589213996	1.50440590231139	0.132476885457931	0.76033877064278	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79660169356237	2.44181999537264
Merged-chr6-5104461-1	3.01638437804556	0	1.35182035011417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70963049-3	8.97947741614427	0	1.29546293437694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33951521-3	7.41067395728751	0	1.3442748087512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24758502-3	7.88625729320781	0	1.31269157109807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41002079-5	20.953265244155	0.402563663735787	0.441582013180177	0.911639631416622	0.36195845254972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34865376570366	4.76377488106014
Merged-chr15-73176751-2	5.68656077980581	0	1.31228767615691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116019707-4	12.0740043063869	0.259812054191326	0.612774121814739	0.423993189238946	0.671570780338437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92146475745516	3.52306254531496
Merged-chr8-111178003-2	9.12566018969301	1.86451586380805	0.584042636330319	3.19243107921581	0.00141080608362649	0.0247624320012508	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87688000663617	3.75182056075824
Merged-chr11-86836571-3	6.01268702874493	0	1.29315078059675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24620272-6	14.7966307022649	0	1.27898169801802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5807915-3	7.55329255453185	0	1.31258399354372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136644829-1	5.85690758273921	-1.27083570103358	0.75906425947487	-1.67421359281592	0.0940886290057057	0.592551614399272	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4422643703498	2.71158884927678
Merged-chr16-97992677-4	9.1087316394142	0	1.28482251907932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131378163-5	14.1630223344023	-1.54361742024406	0.730109125492483	-2.11422836168886	0.0344957676014947	0.284042392853739	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50085007536902	1.54311005189624
Merged-chr10-94355232-4	7.34152943829275	0	1.30681520517323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125354856-9	35.107389929576	-1.62332846750218	0.423184987186812	-3.83597839397259	0.000125065403165771	0.00377658217896048	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78164193056695	2.55707181745548
Merged-chr14-50820113-6	21.0280990345305	1.41243258817253	0.490489873115348	2.87963659514814	0.0039813378991792	0.0548523100062753	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56180857118682	4.03930997358261
Merged-chrX-159757025-2	4.30520339204727	0	1.3166362117031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90206707-3	5.22260327014709	0	1.33168947526592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116268063-2	3.83422017562716	0	1.35017220341398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52760539-3	13.9294467794063	2.26871762117433	0.506819221817532	4.47638432701578	7.59177698258445e-06	0.000405808224300927	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1451267151958	5.22308452779036
Merged-chr11-11773381-2	4.48381464509053	-3.11653023251097	1.08162695377598	-2.88133558583308	0.0039599377240576	0.0546727425557295	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90385024097109	0.61242769162773
Merged-chr2-173352385-4	9.78551798199135	0	1.30733542155165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144316724-3	4.12637456812208	0	1.37072234625995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37454380-2	5.01229829984238	-2.89534979385665	0.956166874310182	-3.02808000532907	0.00246112919948022	0.038101148701548	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44436398245792	0.683637474991079
Merged-chr13-117052958-4	7.01045189178183	0	1.30412713017514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34338867-1	2.1742864801638	0	1.41652370059341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119733764-6	70.166122265791	1.29379344481402	0.417846406452779	3.09633737381498	0.00195927301599523	0.0319374991409912	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27818955105746	4.24992245472598
Merged-chr8-125068741-2	6.80125474930789	0.581994282088572	0.820508524137328	0.709309245385931	0.47813259234721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67877957809633	2.33928634671025
Merged-chr10-84886563-5	13.6254842836235	-2.08597631283729	0.570364103476015	-3.65727138177974	0.000254914448576955	0.00658144589360321	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56850962287258	2.02684776513479
Merged-chr14-33240585-4	9.6083569976468	0	1.29430551502219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53466780-3	4.93351849454233	0	1.3200792950882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168557079-3	5.59288210222555	0	1.31169957828696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43855010-7	19.7022568114532	0.192184739383772	0.436980105201882	0.439802034682984	0.660080493858583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9277530621742	4.07206132519206
Merged-chr6-148761611-4	6.23275417412435	0	1.30051794714305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33400186-3	7.90345299606391	0	1.38415822120072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99266504-5	16.7182029272336	-0.437214631934467	0.483393048183063	-0.904470251646838	0.365746101627612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96450212556349	3.59252346797052
Merged-chr6-54162999-8	21.9818845271396	0.612752899773568	0.378201109667761	1.62017742441807	0.105194169464783	0.645144833209356	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09602422409172	4.78573160113651
Merged-chrX-68692026-2	3.36750503265224	0	1.35156839082363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66810254-4	7.0543580269204	0	1.30629159789072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167340490-1	4.67439563071886	0	1.36495794605104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57593922-1	3.24154850306191	0	1.33979482768942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26168202-3	7.8238950180823	0	1.30901443891882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14243975-1	2.0075809720094	0	1.42985277087416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100137554-4	7.67044066445457	0	1.31350940751048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75667178-3	9.86229566556228	0	1.34893558099184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72325625-1	7.37520732464272	2.39229657336243	0.678859314050622	3.5239946242883	0.000425092873383231	0.00972623210927893	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15739180407335	3.43878551644104
Merged-chr6-124993505-4	14.2136758023662	-0.320401572233064	0.4819104325193	-0.664857099187684	0.506141897549198	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74647092493749	2.83017569451919
Merged-chr8-11015789-3	8.92622686325143	0	1.30716193917454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83128208-4	8.82519815041428	0	1.2912548837454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111016987-4	7.79264955017056	0	1.30383718749933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6441865-2	5.46368819964847	0	1.35108038906722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87462576-4	11.8420617868998	0	1.31994892344359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149980046-4	19.4968475621346	0	1.31837687565232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-43303185-5	17.75755333735	0.639224804995972	0.572511004840622	1.11652841533399	0.264196014036505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30393539206471	3.93859551777556
Merged-chr5-125334835-4	13.5951825502558	-0.881713504377179	0.434016469894084	-2.03152084203705	0.0422021874816169	0.328341962516221	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35918272438066	2.99103206777474
Merged-chr15-31473017-3	8.26058612734143	0	1.29389291382181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68705668-3	10.4945997371684	0	1.314447036771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165188976-4	6.05148932481079	0	1.30483025589443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103051374-4	12.5604458581228	-1.02256629467639	0.535632751032781	-1.90908097517325	0.0562516465612362	0.404645356920859	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47529836468042	3.54091155405927
Merged-chr12-26425320-5	14.6065940734724	-0.845690307621939	0.386178747659928	-2.18989344376522	0.0285319655795059	0.246555120703305	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07690993010312	4.04643173875247
Merged-chr6-135261311-3	9.68153583973797	0.893560345845844	0.54351604061092	1.64403675159517	0.100168611158227	0.621675319460229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07336926162158	3.2196220251985
Merged-chr10-56840932-3	5.41661761834273	0	1.29689792001122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39638977-2	3.79157820556782	0	1.3160954794157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100791633-3	7.96080055223699	0	1.30043903832727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141735063-8	28.4051098691081	0.666568869887599	0.390860115412528	1.70538984051642	0.0881217418575793	0.563169031141846	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49789078820884	4.09297499641161
Merged-chr12-111458762-4	8.79380464911452	0	1.29051113634925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147086804-2	8.38512701684722	-4.05616610960684	0.895855664800288	-4.52770046446162	5.96290240294425e-06	0.000334752423043639	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68900348335457	0.73596151290311
Merged-chr13-33959933-3	5.43533863320786	0	1.34599857982454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-26853906-7	28.6940182757957	1.0129899447396	0.424737988362614	2.38497608524428	0.017080231642349	0.165621726799368	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93693320415368	6.07583455896736
Merged-chr7-113134046-5	25.7723988883679	-2.22228810423601	0.433134126723247	-5.13071579246848	2.88642444231946e-07	2.97972024656884e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88276983575052	3.72070871003925
Merged-chr19-55585419-4	6.19874648132655	0	1.31230687427789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153111541-7	42.2651572642399	-1.41964757871296	0.385252279070813	-3.68498164926368	0.000228719118856113	0.00604606777539303	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87431534611283	3.45638366532437
Merged-chr18-9828195-4	13.4746426850002	1.78685187994383	0.432505045074576	4.13140124096293	3.60558593169362e-05	0.00140160986491642	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26975487654086	5.01445417416264
Merged-chr2-126164787-3	7.29771280018125	0	1.30597967900872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152461672-3	9.2096305418662	-2.77792389123576	1.15606354925583	-2.40291625233227	0.0162649118581895	0.159490835877139	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48874290064742	0
Merged-chr10-88676404-6	21.8211689840373	-0.25757245287297	0.30600241011644	-0.841733412409918	0.399937191359852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18256462657969	4.81904029844056
Merged-chr11-116103711-4	7.47359897438022	0	1.30553179597166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69664132-6	32.1539185682452	-0.337849249567819	0.471423317530101	-0.716657910215157	0.473585202580036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34142279811802	2.67581079034627
Merged-chr1-105987285-4	7.71088902377486	-0.579567343827053	0.987607422669935	-0.586839801446843	0.557311302897782	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.763308286010684	1.07938469868934
Merged-chr9-85573926-1	2.55418832167439	1.87013530594681	1.34358893380984	1.3918954368312	0.163954063867999	0.88229780593908	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr12-113898873-1	2.6847814576292	0.702288051627728	2.450641467519	0.286573152758537	0.774439173574726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.576613669504516	0.926147595614233
Merged-chr6-128133896-1	4.04410275225926	2.45427333069209	1.26447768427774	1.94093842952551	0.0522657459922294	0.382715983595722	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr16-92475519-1	3.30664707349562	0	1.34752992986766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35551973-1	2.01149508411638	0	1.46960001609818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182461524-1	3.48287032512194	0	1.36319492895936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7525361-1	1.95131670630362	0	1.60489837558274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103605121-1	2.36374399465486	0	1.41045093734803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61138709-1	2.80303596434799	0	1.4012196378129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166499687-3	4.76134044799949	0	1.3518096017126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95617894-1	1.44466827239231	0	1.56088454489967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9804765-1	2.19087563564884	0	1.397440583516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80373700-1	1.9728684245197	0	1.50096388575823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45244076-1	3.00693657786992	0	1.39624802781867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35196078-4	7.85141665989641	0	1.29157826141844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114869605-2	3.50666797030805	0	1.34997565806547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8977242-1	3.87014145690177	0.597087032746821	1.12880341098852	0.528955730408307	0.596836160176322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98359537354192	2.3545212614855
Merged-chr5-66114765-2	8.27560365815991	0.812666714177895	0.69074340349278	1.17651027873535	0.239391027431367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00560595722133	2.63557780014842
Merged-chr11-4122733-2	4.0569898707356	0	1.32391364856611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24980303-12	42.7267978946609	1.49466577191802	0.302345140520624	4.94357464897327	7.67029602985635e-07	6.49252803584188e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34774900178987	5.73984159334007
Merged-chr19-60950721-3	6.77236539734985	-4.57622262422005	1.07463197183528	-4.25840915230234	2.05886859292998e-05	0.000898982697448646	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.067514067667	0.382164212378408
Merged-chr9-13523260-3	12.7724717913039	-1.96095553009746	0.704909698099248	-2.78185352731715	0.00540494276879122	0.0691718351291483	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97289215394117	1.43116362910629
Merged-chr8-107455408-2	4.32213727654114	0	1.30322753142606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90323462-7	31.715932390893	1.23266793992772	0.292795666797737	4.20999379331406	2.5537770389527e-05	0.00107042408202311	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96075861291153	6.21788621799798
Merged-chr11-119091508-3	8.76717320839963	0	1.29517015033542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-40835795-6	14.3340185888367	-0.452571517065073	0.648183941489485	-0.698214639543665	0.485042972512731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73233881525956	1.75888520587568
Merged-chr1-16797942-2	5.57478094201292	0	1.31497865411396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41104591-2	4.50055932163265	0	1.4127702743249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44527689-2	4.38470521843905	0	1.32064563664443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30554022-4	5.51505044832125	0	1.31274949999404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6391740-4	9.25561618852103	0	1.31840114217839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-99142430-3	4.50576146951846	0	1.33497605700232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12241111-2	6.00849192662928	0	1.32311161181813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27032999-2	3.03709912355586	0	1.32912242984047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62228519-2	6.56807332787197	2.67462971727638	1.03662007677642	2.58014462308473	0.00987589458942391	0.109902964550493	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	1.47158896970822
Merged-chr8-115530143-4	8.87107258214781	0	1.29087612046067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97450988-2	5.27998860350734	0	1.31608084667043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54316872-1	5.90278000841561	0.352677283170616	0.734715899495249	0.480018580532837	0.631214181123721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75409117819183	1.780058382249
Merged-chr6-125526252-1	5.86066894151613	1.26312448199696	0.96220036007122	1.31274580057678	0.18926861880788	0.979406649082968	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20917457088805	1.51124524563069
Merged-chr17-57098457-6	19.3439924153014	-3.72945129437854	0.947530130751321	-3.93597118797833	8.28609144873164e-05	0.00273190177501926	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89006033940241	0.609949614787909
Merged-chr13-44646091-3	5.66668208227068	0	1.33623366023961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5275472-9	35.429851000793	-1.58065165032215	0.335231916674219	-4.71509892615101	2.41593340480943e-06	0.000162252399044889	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.9812267134411	4.36747405787838
Merged-chr13-12409345-4	5.8567475961733	0	1.33687267113937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15321739-1	3.61159438157347	0	1.35208768615992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67223019-2	5.09925896874112	0	1.32451693295455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-70954868-2	10.965787230956	-0.204938748563996	0.443401507208758	-0.462196779289496	0.643940212678143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98654386010023	4.73820597761007
Merged-chr6-101545798-1	2.6417513661766	0	1.34843195763216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74576035-7	21.8599010713265	-0.602328120054565	0.467900422272917	-1.28729980009131	0.197989813212479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33577984198698	3.6267804556451
Merged-chr5-3360125-3	6.21870069041949	0	1.30097323790359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21280677-7	21.8861342704155	-0.268343587586781	0.363005421655773	-0.739227492423633	0.459768869328276	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7013142792348	4.4735839135149
Merged-chr12-73606079-4	5.83763841164802	0	1.29128014437029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56616529-3	7.19825761556997	0	1.2928368437774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-42529919-2	5.52926391177637	-3.93505323805357	0.984847176845311	-3.99559782529756	6.45312030985886e-05	0.00224300850940445	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0425667961926	0.563523181795778
Merged-chr11-32554092-7	39.1006318825063	0.806627552685065	0.424305409363224	1.90105413432181	0.0572949223335825	0.410345681149746	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03303144147483	3.61934315247402
Merged-chr13-63258403-6	20.3148577277341	-1.46463306253093	0.475749889374343	-3.078577831005	0.00207991192050104	0.0333612970930439	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30371927196166	2.4066179430359
Merged-chr12-56336126-2	6.14635288919693	0	1.31676752719369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13199398-3	8.63694034470893	0.730596360061431	0.645767016315703	1.13136215012917	0.257902695464108	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44285722901294	3.9922406576469
Merged-chr8-83773342-1	7.7007200541097	1.13016874069157	0.583996139000595	1.93523324079787	0.0529616803733782	0.386383160174029	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43209023700031	2.92578707161297
Merged-chr1-135699567-4	9.32840060985772	0	1.29525365926908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3418959-3	9.8985517233563	0	1.28954874144115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21367683-4	6.73805861988954	0	1.29023865730494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18423291-3	6.39343176138191	0	1.30948324905883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136450491-4	10.7924145184355	0.671579315946451	0.494857037979463	1.35711784294017	0.174743769869766	0.924449998859271	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79094121368614	4.470397964386
Merged-chr1-105984295-3	14.250855467777	0	1.32839790253621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26068464-5	12.9867512442797	-0.393452418374298	0.493399275281044	-0.797432096247375	0.42520012483798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5073119739474	3.27536759916832
Merged-chr3-121105012-4	5.59789916312885	0	1.32426573345971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50973537-2	6.7167706895269	0	1.32618286761626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124922429-16	52.3706805078171	0.208920633787669	0.250129700842068	0.835249205049752	0.403577410464443	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76212981800228	5.95640858183932
Merged-chr3-60615490-7	15.1668449727137	0	1.29423117067392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30972098-8	25.1253186534951	0.625750127313231	0.388888486133543	1.60907342239582	0.107600287945429	0.655789532471966	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46301847408184	4.03840976679356
Merged-chr1-131084365-12	67.8235798400631	0.812168081805508	0.317382383600473	2.55895766044747	0.0104986527125144	0.115224212319779	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33237201447356	5.03206354349168
Merged-chr11-117325712-4	8.37433092046693	0	1.29560547491142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125513616-2	5.17627800532859	2.48902730982038	1.21882162419881	2.04215880355466	0.0411357814550001	0.322696131447592	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr7-6940969-2	4.25668222695094	0	1.31060682917169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54110885-5	16.8178469594184	-3.56412326811705	0.628894095445507	-5.66728689922304	1.45076314475284e-08	2.45599918282433e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0826850092025	1.26501898168246
Merged-chr8-72013903-3	12.6301545378131	0.532091977821762	0.672056072027352	0.791737475441047	0.428513766118139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64417106945787	1.86123704904507
Merged-chr4-46575008-5	12.5774479500374	0.40863536760287	0.411843234807515	0.992210950833891	0.321094631645632	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45823926451099	3.890833627958
Merged-chr16-95659697-3	6.59098356985637	0	1.30175909910076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138958732-8	21.7014075851362	0.481717284089956	0.340402453548781	1.41514045820743	0.157027317925926	0.856162462844185	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87220387769442	4.50754944676654
Merged-chr14-25857362-6	17.6297307249932	0.773713633441911	0.590321501207096	1.31066483578832	0.189971023879184	0.981797415881775	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15215204112904	2.5849202136255
Merged-chr4-70578417-2	4.0195528985983	0	1.34611398081821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-112348142-2	4.33476100800054	-3.84937453399439	1.15755754280638	-3.32542823284792	0.000882828248574447	0.0172619074600077	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98735312511741	0.61242769162773
Merged-chr3-28107571-3	8.74913045437947	0	1.31986286869764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53807670-2	7.89973052891523	-0.698109981884143	0.699276328090036	-0.998332066796715	0.318118363036737	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62285405459645	1.88903407179563
Merged-chr13-102665759-1	4.06978029570491	0	1.31594991633192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78473595-2	3.68581829552592	0	1.38506201589435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121408126-2	3.38809884071368	0	1.3411641080875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75833887-2	7.19337001865453	0	1.30127589800135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123332997-13	89.9383020284805	0.148581303927185	0.234990438753656	0.632286593085366	0.527199622572839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07803491239388	6.24809094823181
Merged-chr9-86544771-5	16.2398001916141	0.296296878228445	0.776231076228041	0.381712208261808	0.702674843681893	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93854902463299	1.63412505265868
Merged-chr17-8838452-4	7.27058058750034	0	1.31472426391442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29258536-4	7.42268270675584	0	1.31318924997095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76283677-6	12.64302058864	0	1.29062715549714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-20961983-3	6.35504719440434	2.37707392740056	1.2393670857818	1.91797406488416	0.0551142997728576	0.398175680813395	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr13-112337279-7	35.4025846818306	1.15841751328052	0.312124350971091	3.7113974275843	0.000206118189693184	0.00559343821581843	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08672443871798	5.18767182549259
Merged-chr19-10173603-4	8.8995541161004	3.4230242551874	1.06668301013369	3.20903607038645	0.00133180783005296	0.0236618582008267	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr5-86792968-3	4.30063070229008	0	1.33944731959756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52579646-4	6.63815520816053	0	1.31458316161629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65987043-4	7.11811518723467	0	1.29114929684624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24967157-4	9.64511117168004	-1.3309937382071	0.670290159489254	-1.98569786437159	0.0470668822946226	0.355030877343231	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12364711762443	1.76891977860032
Merged-chr10-44598872-4	7.86906987508276	0	1.30099421522434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100750760-4	8.78695052375626	0	1.31005950707334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3228333-2	4.18830974818464	0	1.34288809620732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105559929-2	3.74733259255988	0	1.31147893950154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86006697-3	6.03059087898107	0	1.31516208590103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12021438-3	5.00768809050245	0	1.31471386174968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142538763-3	4.89754942545098	0	1.37219762511813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122925766-3	3.4719001426399	0	1.35631517176143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19183601-4	6.72084766420675	0	1.2999236818895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91179428-4	6.72477284844922	0	1.30057489434975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32780519-2	4.00334562071158	0	1.32007881253414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74240359-4	7.70624131059745	0	1.2936488320218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16574691-3	6.22587516372043	0	1.30451503083594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160086252-5	15.8655414826565	-1.55789889880433	0.518906962970843	-3.00227017553409	0.00267974229870522	0.0407233581979515	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39512429641862	2.91790730682473
Merged-chr5-72812656-7	14.9324968672812	0	1.28577618992199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80081443-3	7.4625182425321	-0.919973466200886	0.719817461149312	-1.27806494820505	0.20122652676385	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88662158057337	1.486851288245
Merged-chr4-44016341-2	4.12251286283767	0	1.31411492135832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83448017-2	3.90322362504334	0	1.31599953470603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112394161-2	2.76286656424022	0	1.3620154989154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57292470-4	11.3342624542747	0	1.29973431544871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3345306-4	13.4323159737268	0	1.28444275792733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79448754-3	5.23047081860695	0	1.30194509247959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60968757-4	7.39209678556412	0	1.30236474238019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11513657-6	17.6755615878514	-2.04058290651032	0.620433702230661	-3.28896205859507	0.00100557578227828	0.0191018474037082	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81239650936819	1.54084633208408
Merged-chr5-88500064-4	6.28374368076252	0	1.31509742370926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17851572-2	3.33199600309225	0	1.32766693717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99294015-4	20.9981155341663	-1.65753411891169	0.37858064335579	-4.37828544063711	1.19616621806922e-05	0.000583318490193667	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32585467875106	3.67575300755428
Merged-chr3-95957557-4	10.1138170346153	0	1.29831866505937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87746924-4	6.34127221707195	0	1.29994655459248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5365610-3	8.33559767726828	-1.5214830877664	1.05540394389674	-1.4416120922846	0.149411835209547	0.82713197082371	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38495392432751	0.469435083901436
Merged-chr8-35645550-5	11.8106995966257	-0.36632301461645	0.62228702317659	-0.588672109449559	0.556081250952926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80146438815815	2.40184156770979
Merged-chr4-105560999-5	11.7573376625153	2.16674138172645	0.572698404832071	3.78338993691066	0.000154706753107211	0.00447519587806277	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00436265314701	3.92294974609508
Merged-chr14-65064814-4	8.40434655626967	0	1.3019909945876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78430677-3	5.45561393924039	0	1.3118231058516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9772945-6	12.7091267356134	-1.73111962696731	0.509929332613557	-3.39482260825192	0.000686730800542826	0.0140806748955982	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18085351187064	2.61093010937348
Merged-chr9-107265006-3	9.9776699472228	-1.31797053445199	0.781837278649575	-1.68573508892854	0.0918468352005597	0.581234097716035	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74591120872466	1.47711801254374
Merged-chr5-90857750-2	4.49276340623352	-1.57839512498947	0.738807353567557	-2.13640960308219	0.0326460420002393	0.273428385099672	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76349738792213	1.54311005189624
Merged-chr3-138026478-4	7.36845023365333	0	1.2955093984089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50095877-4	7.64685587330466	0	1.31321425789682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5765939-4	9.34716417609564	0	1.32836258510935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55506593-10	43.5493556851502	1.01633310240327	0.305075298007294	3.33141722401586	0.000864049928113942	0.0169760092010023	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32123367216903	5.29464546048675
Merged-chr9-59760727-4	5.9176525966503	0	1.30364114025837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74729614-4	13.7408362919907	-0.555811359477268	0.541574024176083	-1.02628880756023	0.304755471386781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96749253331099	4.28656932126367
Merged-chr14-17428019-4	8.02201548489779	0	1.30170103381471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62667803-4	7.41049927510502	0	1.2948533005326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17256570-4	14.6466412579768	-0.749093168360599	0.411306580353543	-1.82125257445847	0.0685684719620951	0.468200143033968	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67961589832302	3.82775874903795
Merged-chr12-100837413-8	24.2439149063265	0.649789193903427	0.417837482055418	1.55512423324733	0.119916484537068	0.710238611307828	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47438548069762	4.26809692846553
Merged-chr3-131868377-5	10.9500089431866	-1.84011102884462	0.934426220004716	-1.96924164738799	0.0489253484624648	0.365046337134988	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22322273600616	0.581381506691384
Merged-chr14-121985621-7	21.3206811014573	0.0551999269507765	0.479618742550809	0.115091263233794	0.908372784816277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83505569626286	3.61964800238735
Merged-chr15-86206626-4	11.84543855507	0	1.29566031110835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100492127-1	2.03802114141849	0	1.34144731556616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4333561-1	1.8686200835332	0	1.45290457170474	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72152821-3	20.7086085132453	0	1.30302852942066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83673652-2	6.03314122376994	2.60159030363112	1.07443050109621	2.42136676218405	0.0154622681227253	0.153346087835424	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	1.46168672155135
Merged-chr6-128736319-3	8.30912772511309	-0.465073800278723	0.692867409998975	-0.671230589817192	0.502073644341292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37987574327707	3.49651005769111
Merged-chr3-105850311-2	8.59105156527094	2.22508921839184	0.754634787880657	2.9485643308876	0.0031925368645022	0.0464838489188415	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29325490643288	3.71402822234174
Merged-chr10-67648384-4	10.5334247286317	0	1.29576161263856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102853509-2	4.82349257062218	-0.423384772566325	1.05710766857903	-0.400512440833431	0.688779122160424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96162834523919	1.75624551133882
Merged-chr15-101275853-1	2.61792792967634	0	1.34959843578842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40183091-1	2.24597841699849	0	1.38380721111212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-14628362-1	4.51390064106671	0	1.31933750865731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122139963-3	4.43573509935271	0	1.3374546697872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-83747629-4	5.58128250261471	0	1.32342298642966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123353387-1	4.33199610707671	1.91676758442228	0.933378765075312	2.05357959291866	0.0400163989470951	0.316383739334165	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80386854112624	2.69445371395831
Merged-chr8-13660993-3	3.5070871513843	0	1.3505113894276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16162128-1	5.31627694901905	-0.23808784850642	0.83919539882702	-0.283709668617351	0.776632884587272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28153035913616	1.90896656829731
Merged-chr1-185230088-2	2.12595705868741	0	1.62449592193508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17844772-1	1.80851154719866	-0.382008312078481	1.59425703076076	-0.239615259464272	0.810628534016288	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr13-101760473-3	11.7992096929069	0.48763237182718	0.588065721777515	0.829214072116362	0.406983283524726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27279815163485	2.76517605948721
Merged-chr5-114596842-4	9.0993360519276	0	1.29613655319646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132719675-2	3.09702268988468	0	1.37473034839138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76646176-4	7.45347826887889	0	1.30159852529915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103337276-1	3.00988405015182	0	1.35433332579085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60977516-1	2.33692422414823	0	1.44913779413119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50449783-6	15.0864059307175	-0.529689384627583	0.433413668954727	-1.22213354716072	0.221657128683804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02505148761158	3.52058792292337
Merged-chr19-44474370-6	19.7649443048981	0.548429319956928	0.392949520060584	1.39567372387265	0.162812770419569	0.878326037797171	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35486492426359	4.02264917147346
Merged-chr8-68191942-6	16.1420312613259	-1.09897695061153	0.4475106228497	-2.45575611951591	0.0140588531195034	0.142653698128426	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05693221892441	3.14348572890932
Merged-chr6-70875380-4	7.11745059037851	0	1.29542467870124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-64942006-4	10.5495818620383	0	1.30593684596191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58344118-8	22.5084808891875	0.700793281588958	0.387251618293902	1.8096587554015	0.0703487222867694	0.477462360464399	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73035079521813	5.48039140765799
Merged-chr7-31082977-2	7.31096953022554	-2.32296802051367	0.784862865929603	-2.95971197180072	0.00307926784139214	0.0452683546374827	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88767434337692	0.905469781553611
Merged-chr1-144204918-3	4.83836253715097	0	1.33711409512228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67644388-4	9.65735546866963	0	1.29516424390278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78753662-6	20.1589920415257	-0.29438715929649	0.35879202470999	-0.820495270301624	0.41193382442113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23883610545364	4.96972330521924
Merged-chr2-128122592-2	3.49396140369558	0	1.33034441216637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135267771-4	8.07211047755908	0	1.28875832218334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44735976-4	5.16949027872651	0	1.32415962102776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65937175-3	4.42733223254144	0	1.30987192181727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60217779-1	3.21796878054096	0	1.31621951426255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17762427-3	13.213630783167	-1.96360932614919	0.606134064441854	-3.23956273263959	0.00119713129394582	0.02182084840563	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04982002956923	1.9699838995169
Merged-chr17-49423069-7	22.7613960891775	0.676698019585657	0.413594234961822	1.63613987426136	0.101810316605377	0.629770631285022	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33292509447805	4.03079097186475
Merged-chr16-55853075-3	5.65277814650891	0	1.31065497510007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90431168-7	44.8253132901887	-0.00892311375533028	0.325259174923983	-0.0274338571922397	0.978113694270015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90183369594519	4.01841332917361
Merged-chr14-40975350-3	6.2935130161058	0	1.29961163893739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102691213-3	7.1076543940826	0	1.29983181955753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142910393-3	5.23754355160141	0	1.31732235258404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56726186-2	4.67051264951282	0	1.31481134087727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75726477-1	3.41905454085012	0	1.36088302902102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72412875-2	3.42790709614016	0	1.38333916825083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94296594-3	4.9710896244407	0	1.33153754128684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94492159-4	14.3298673868063	-0.215399134963505	0.375443341510979	-0.573719416880925	0.566157686756642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78579403408249	4.50361728241005
Merged-chr18-75494913-12	60.1405972776858	-0.482480709600993	0.219141029709076	-2.20169043762146	0.0276871826522656	0.240942872561624	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.08715387709196	5.59954197286849
Merged-chr9-120691795-2	2.81335934245945	0	1.37672840450356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18680257-3	4.37620525943493	0	1.38952381688861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56063218-1	3.95163028853004	0	1.32618202274606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57853155-1	5.39800251552801	-1.2116141079425	0.890110147984209	-1.36119570222448	0.173451852001736	0.920222840050779	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55840629440779	2.25127403271157
Merged-chr19-28664039-3	4.35761469923416	0	1.33401053425973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29597345-1	6.30438563951675	-0.679891761584896	0.681670044585926	-0.997391284808313	0.318574619977386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83792254757346	1.90896656829731
Merged-chr8-11016717-3	5.54944324948504	0	1.33976225469409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184235764-3	4.4530037123285	0	1.32114398041748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124711583-2	4.91247803679939	0	1.319161441664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69177271-3	7.09853305697742	0	1.28872791244473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83737798-5	28.5834496569404	0.244792652876767	0.310689309999431	0.787901755864132	0.43075417403597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01484890518936	5.14753792174188
Merged-chr10-19548213-4	8.13758117344143	0	1.29668305118367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156264157-7	20.5226648724058	-1.91387273203596	0.523630397804394	-3.65500692866746	0.000257175032348147	0.00663194935431019	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56706287891896	2.08137280208315
Merged-chr4-84545348-3	6.94323546249931	0	1.29888800773425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40949432-3	5.37821453746027	0	1.31645867158949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139199278-7	29.4719041801234	2.75679312858099	0.418509917420538	6.58716320409402	4.48309415650381e-11	1.79725319479079e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19654791143084	5.18633286580627
Merged-chr1-161463924-7	21.8037010080252	0.303460669898325	0.287510160441502	1.05547807226127	0.29120673299615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08240534970867	5.18846285996699
Merged-chr8-35159539-3	15.7182345753386	-0.881699088357163	0.450080069558528	-1.95898274105316	0.050114808033887	0.37133487309019	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65267798093934	3.93952871444968
Merged-chr19-42156377-3	3.77346307149135	0	1.34785601496757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45344480-3	4.76195897175892	0	1.32336331952948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74960533-3	6.8447660197504	-1.58595530687062	0.637693651962926	-2.48701755457152	0.0128819042375391	0.134062894458708	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18921475252235	2.70275322934241
Merged-chr10-20769712-7	23.3370784746858	-2.03477341290787	0.461018089854175	-4.41365199693462	1.01641297734374e-05	0.000511698940042404	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41044538809988	3.43364782874133
Merged-chr6-57529502-2	2.39902058465838	0	1.59284498134675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79433151-4	9.1041357068706	0	1.29744736844371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3450224-2	2.2180266427595	0	1.58131502707964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20054085-2	7.23287724243113	0	1.33451175770919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53423594-3	7.75885430414825	0	1.30001312368109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180199674-2	4.82221936557402	0	1.3363198240045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156442095-4	17.9223585237405	-1.38114286404696	0.673592041616301	-2.05041446263658	0.0403240030523606	0.318122938966504	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77957914306685	1.41959898789419
Merged-chr6-135371302-2	5.21977155777865	-1.75751836195469	0.792192641978033	-2.21854921243187	0.0265174080171849	0.232834585657494	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69181504520318	1.77802408088656
Merged-chr2-84358817-2	5.64497410745788	0	1.32777764690585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38010598-7	38.6582027621878	0.300717260322557	0.270219771275567	1.11286179728088	0.265767789610229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96232210393516	6.22707747549049
Merged-chr2-131509988-4	11.2080298439106	0	1.29912936646095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64883282-6	17.8006091816704	-0.54097600471476	0.551152360019446	-0.981536221119825	0.326328381578025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20453618286882	2.70924337488271
Merged-chr9-104408697-9	46.506842659917	0.922474385579502	0.22336295778309	4.12993450093603	3.62866599746693e-05	0.00140974321207178	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.80773011830084	6.68960332634309
Merged-chr6-87255820-6	18.0484192435926	-1.50452424551718	0.612582088378255	-2.45603695253357	0.0140478711475436	0.142586546754797	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26073809136731	0.843323834477631
Merged-chr17-78245072-2	5.20882790972645	0	1.30738285992559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62808833-4	10.88125000502	0	1.28857191901627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52319326-6	15.3036339283883	0.572462694155741	0.550601571334799	1.03970406907475	0.298477409554394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96212805894248	3.99256137960375
Merged-chr8-108783377-4	6.94106329811965	0	1.3071369542954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46994447-4	7.42578439942931	0	1.29955326843503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94485481-3	13.3424262261692	-0.654930627474905	0.463857415285347	-1.41192229744138	0.157972841560488	0.860240637598924	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07441317123838	3.37522599479834
Merged-chr4-139490863-7	20.5528867469253	0.282190028352782	0.37062458846577	0.761390466619957	0.446423879938186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44165051609983	4.54557514475571
Merged-chr10-14460012-4	7.13973391371303	0	1.33505190372592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35707090-5	22.2989945017896	0.149704949746893	0.423472380226931	0.353517624140372	0.723700418502071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44787988533126	2.8185216861781
Merged-chr2-68368006-2	3.61399379194456	0	1.35537226840488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92098900-3	3.49196214498879	0	1.34805020872361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122491771-4	6.20301856434926	0	1.3129886369875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84935712-4	6.90108769928542	0	1.294929103556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46074111-4	10.4848195007082	0	1.28416541667658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25285602-3	5.24776359706682	0	1.35750188185166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47320156-3	5.20944373397752	0	1.36267155357149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120131327-4	5.5544980878301	0	1.32663771498557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45623975-7	28.3790391062428	0.782940684026095	0.346990382554183	2.25637574811987	0.0240471091394203	0.216294892474131	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00087463583442	5.77200225128965
Merged-chr18-38233536-4	7.17013545433264	0.107930379188978	1.29560479080084	0.0833050170509662	0.933609011133525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr13-107094764-4	6.9250137972381	0	1.30024740838884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50438557-6	11.6293404450012	-1.20737246689578	0.657750955461843	-1.83560731743523	0.0664157541556902	0.457034948510713	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67336988811756	1.75122680664397
Merged-chr5-64676384-3	9.78048937698004	0	1.29649780054984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65671135-5	17.7884475960906	0.146098582992746	0.468787794939506	0.311651848810609	0.755305125589467	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.745599044476	4.98784304246239
Merged-chr17-5784926-2	2.72632460652622	0	1.43251251787498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94492601-3	16.1876145557105	-1.13236186711931	0.425088718690266	-2.66382479075947	0.00772577905671682	0.0904584766601357	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72689505220234	3.68075726148466
Merged-chr16-45758898-5	19.6199620178967	-2.34481364055338	0.600906984411468	-3.90212412466781	9.53522366862699e-05	0.00305140372479251	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09094084808844	2.88854826306555
Merged-chr11-46829925-3	7.06679435337506	-1.53934798357685	0.740987469677917	-2.07742781972542	0.0377620907649521	0.302996265118684	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97692337666253	1.59982791176663
Merged-chr10-88741621-2	5.22475317560619	0	1.34486833192368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116053499-4	6.09049051161965	0	1.31671564798737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34366706-5	20.5712555267996	0.212042823190339	0.419828427726885	0.505070188644494	0.613509538892171	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74066616628919	3.67668267545141
Merged-chr10-82969758-4	16.0702434794513	-0.335992005215847	0.397451264527324	-0.845366552338014	0.397906213318709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89272100940205	4.5417503628515
Merged-chr12-17713030-11	48.6807710762169	0.148346210026452	0.277100353908434	0.535351932735069	0.592406521565584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41291643652219	5.47197439608329
Merged-chr14-62328590-4	7.02346872719513	0	1.29287334619097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146821364-1	4.76491163169947	0.363777335968655	0.90454216925762	0.402167359723224	0.687560862061648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84534343527978	1.92954417814436
Merged-chr11-109380840-4	5.61017020371206	0	1.31209396582793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116449768-3	10.7484684782358	0	1.34884029760528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167770520-2	7.68374255351305	0	1.32816426306515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123609998-2	4.04306287339738	0	1.32547556836822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85169589-4	9.92069317821696	0	1.2953194367004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42299641-2	3.91751443038279	0	1.34693909782842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86655821-4	6.61420396794819	0	1.31179265246044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59907254-4	11.2178897286218	2.47678295648867	1.20278836563296	2.0592009594184	0.039474991313248	0.313544765085147	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr4-133570332-3	13.8219024219684	-0.450720988960988	0.36479858320662	-1.23553382526626	0.21663189573906	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93312734013788	4.27051159711148
Merged-chr12-40520035-3	5.92400344240003	0	1.29151987629915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145804809-4	15.6822733337155	0	1.32698307479276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25394794-2	5.54011578969069	0	1.3234253604876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27675804-4	7.61161196133989	0	1.30896532055717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93755473-6	23.0601147256569	-1.69786139809481	0.487420361650824	-3.48336165593164	0.000495158963860498	0.0109091900379056	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75703709808876	3.05750724623645
Merged-chr8-90877317-13	57.0524451609201	1.26313807964501	0.246836722971338	5.11730209524653	3.0993699213914e-07	3.15469512279194e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88132101577315	6.04528657395106
Merged-chr10-98619347-3	6.5290232790567	0	1.33147105387291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88832116-2	4.39393918788952	0	1.32015112595206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-40439863-3	8.59750396442329	0	1.32001812773428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-194992719-4	9.88483562686117	0	1.30791358103401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8831989-2	3.9272147414771	0	1.36116518556899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58930137-1	1.58894522335957	0	1.51722648117984	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13212148-2	3.5093625337724	0	1.3266260382286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63249490-1	3.12617155705299	0	1.33823150559479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113391144-4	7.00311412821711	0	1.29194811115856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167230333-1	3.14072365993776	0	1.34013194448097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62301290-2	2.00849550564987	0	1.43608223570486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24963957-1	2.78353341509047	0	1.33378621146052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25496817-3	4.36981545538626	0	1.39178740387294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-133960862-4	8.83437530072139	0.75967833739338	0.529650084531861	1.43430230557753	0.151486012661944	0.835077187734722	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2953661358297	3.23946554605482
Merged-chr16-89884100-1	2.26227443577133	0	1.380840287546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181138910-3	6.55240808795841	0	1.32126614161321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51603909-2	2.81880836057059	0	1.42702537752892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121374601-4	13.5468323832289	0	1.28553938966503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52257352-3	15.4147992910099	-1.00214592995971	0.578152345132792	-1.73335962120767	0.0830317697868575	0.539504228745351	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4588792917861	2.18210741161866
Merged-chr1-155058738-2	3.86508033526561	0	1.34749886194216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69548000-2	2.71356333977686	0	2.06683767010133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99488256-1	2.63567290362854	0	1.3480200090805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32070516-1	1.33891852150275	0	1.57715130690039	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76377332-4	5.54365442323453	0	1.31272836338251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50705111-1	1.72666369336293	0	1.45955418269786	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58301171-7	26.1667309775583	-0.535512660622095	0.349788211942124	-1.53096257203402	0.12577864312635	0.733811751462059	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62877630221591	5.07593248598185
Merged-chr14-30763082-6	17.3206744681511	-1.1195193825633	0.398392485016198	-2.81009161736016	0.00495273991156323	0.0646895347313634	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56643115685977	3.53967265858111
Merged-chr9-103092380-3	8.14089546226015	0	1.28864563910651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100421960-4	10.0889072405023	0	1.29961592449011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58685791-4	6.86961237598556	0	1.31703325872212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86685425-5	16.9819789415182	0.0545774955533197	0.420818187142831	0.12969376614608	0.896808714805807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78524034959324	3.94614781226369
Merged-chr6-137365865-3	7.11765006482267	-4.77941184178564	1.05937984271453	-4.51151857820796	6.43651445122393e-06	0.000355837963899897	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19685678938212	0.306240821987646
Merged-chr2-122450517-6	31.7196791158331	-3.22734591119814	0.357882330217227	-9.01789677416936	1.91734870246258e-19	1.13900971191927e-15	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.59046179923599	3.3632336662134
Merged-chr11-74827203-7	26.6646164645857	-0.328661603743364	0.36976349164644	-0.888842763464662	0.374087589756109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04149223248287	3.65939163378389
Merged-chr6-87189922-8	43.6379775548642	-2.387371797921	0.378910339448842	-6.30062457887437	2.9644863051856e-10	8.96839454160456e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.4168341562807	3.79475430992963
Merged-chr11-100730697-4	5.91659550203657	0	1.35718773024757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62888143-9	38.0847855024061	-1.19938342499396	0.329783413849305	-3.63688219184371	0.000275958065914374	0.0069813224062101	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.84315855005468	4.55175039603072
Merged-chr17-84922144-3	7.24281644451841	0	1.30921122802126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123568340-3	7.86627963994224	0.84551765391863	0.988273795904151	0.855550007925772	0.392246732211995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.935892628934282	1.354969417986
Merged-chr16-89707680-4	6.77576875970997	0	1.29472873197431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11451654-3	7.26697657311802	0	1.3018840594756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6967809-7	25.4130628529732	0.509087133830173	0.337229479506047	1.50961634367153	0.131141348550301	0.754855701704781	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16688807349648	5.66902165510941
Merged-chr9-57433491-4	6.00048630414946	0	1.31079001355807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134342761-4	7.78573775525587	0	1.29555171569216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29396363-5	12.5262613554889	1.76771440874222	0.652749035620539	2.70810726983569	0.00676681469813519	0.082053121778501	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49750342092636	3.16820389295307
Merged-chr19-11928292-5	17.1429029963377	-2.33952550739123	0.453888063881003	-5.15441073155117	2.54429726906529e-07	2.69028558809612e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12902978298391	3.00140563128196
Merged-chr2-109959338-5	15.6689903181865	-3.13389525020545	1.00248817070681	-3.12611693761521	0.0017713110211083	0.0295275739758527	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87045446195444	0.420961122473315
Merged-chr12-8829835-3	10.09949506197	-2.46086248854003	0.635858733536993	-3.87014026661453	0.000108772751875012	0.00338579787746987	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23889674589414	1.71756895783173
Merged-chr4-43466783-10	29.200328163902	-0.992900733882759	0.297683920348931	-3.33541943655851	0.000851708285329285	0.0167738787260782	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77302272629936	4.74641076252477
Merged-chr14-118820225-1	3.9376821734869	0	1.33896362827942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64873926-1	3.1661525821397	0	1.36139757921844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43518882-2	4.93314185183957	0	1.30888850283735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104948172-3	4.65582275485347	0	1.31394432593333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77485071-4	10.5609528663793	0	1.29188830994474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102395760-3	6.73789193973558	0	1.37060210497651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97630705-3	4.78763641108086	0	1.31581480553146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80245075-3	6.04489794638582	0	1.30544680228276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92818201-9	42.8012228545523	1.0444465460381	0.31873388861738	3.27686067700159	0.0010496815115119	0.0197559009364219	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64139805779104	5.36578801466316
Merged-chr9-3000428-2	5.69724962864981	0	1.39408889270896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103543528-3	8.07418209175179	0	1.29640030007589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135237553-1	4.77136665765973	0.618067043973558	0.828525048161902	0.745984741613728	0.455676632369665	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30011017000912	1.93240648380835
Merged-chr11-83969249-1	2.94899147743205	0	1.35246041661695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138023684-3	12.9803897886286	-1.21423807925181	0.567707673078483	-2.13884387481926	0.0324483147809186	0.272156023318432	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31151947719405	3.90111608161007
Merged-chr9-14698061-3	5.60929264599858	0	1.30806810360274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64224953-3	7.52110715703241	0	1.31972262926203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65741396-2	3.2073247819146	0	1.33893787012986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140350112-2	6.29997552975748	0	1.30387821603775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63683280-4	6.94580105843651	0	1.3007792016318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78063337-4	6.51082804151367	0	1.30130154982207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150060184-6	20.1277825063076	-0.324021137254787	0.546103010193793	-0.593333366061841	0.552958073146059	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25227020646383	4.01201003102463
Merged-chr14-102995383-3	6.48741913146827	0	1.29266511497004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83271645-3	5.54211948531333	0	1.29800279893027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23114432-5	16.5355269238751	0.678413719825532	0.52387208963749	1.2949987854764	0.195320648454559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25437494417223	2.63009140624308
Merged-chr6-145187691-7	19.0141636491983	0.0899791539416212	0.51440707043858	0.174918190500192	0.861143916678854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93580613466888	2.82610300771204
Merged-chr8-40703133-2	4.86943065415125	0	1.3409101858125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164924684-8	21.0685882679808	0.587283638290389	0.370190748314451	1.58643521202084	0.112640618058259	0.678085106184708	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59686685504217	5.07908661032673
Merged-chr5-120891276-4	5.99681333394838	0	1.31533784722688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79168151-2	6.01719074966891	0	1.34218114472776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30671672-6	16.8470235094557	0.225586990044296	0.424846533404844	0.530984655179779	0.59542941267252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40387827790281	3.69652343584727
Merged-chr7-128058794-4	5.12149991052878	0	1.31548633851747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46174089-2	5.48816864523093	-0.496162748545388	0.748657049261292	-0.662737028970685	0.507498989963997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92622876612766	1.64109723835872
Merged-chr7-47122241-2	4.80992028750472	0	1.30985116318501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50779162-1	2.7837898842713	-0.265937329694967	1.23352940441962	-0.215590588065545	0.829306892920785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	0.469435083901436
Merged-chr3-121766206-1	1.99635200616064	0	1.43907907879142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13016770-3	5.3404805893765	0	1.30563863667592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116829483-1	2.80707898978297	-2.85937866370683	1.1735618534012	-2.43649591661471	0.0148303368970812	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96537492251339	0.892489746801999
Merged-chr15-58344790-2	7.29871110180919	0.21596800097046	0.942513494527393	0.229140486820036	0.818759726534851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02664576882128	1.08974267817771
Merged-chr7-68059934-2	4.05204053119753	0	1.36326796069908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3652066-2	3.55082376700424	0	1.36331127063705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70777368-3	6.41464063369789	0	1.31389139228126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49601346-1	2.84987760776883	0	1.34267066380774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96484996-1	2.84352095274067	4.16687114237436	1.25153592186926	3.32940594797379	0.000870314525540031	0.0170682992154679	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.00259395741298
Merged-chr3-95509025-1	3.44609410337853	0	1.31952351192446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26883976-2	3.47374895376837	0	1.3756065052172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3545099-7	40.3719864281599	-3.18489721612333	0.392799171057811	-8.10820757983369	5.13719214708721e-16	1.04904674388613e-12	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.39726687513793	2.69386385409585
Merged-chr13-95799061-5	15.2861701808017	-0.26003180854073	0.443374025224132	-0.586484082844682	0.557550254851591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71608558696753	3.53970108753211
Merged-chr9-40841486-1	7.42243555625763	0.155647696292055	0.900304639945764	0.172883365681012	0.862743107030566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42282214470157	1.20539659680455
Merged-chr12-117558133-5	14.2004402408525	-0.874387252945339	0.436586437444267	-2.00278152950402	0.045200743248482	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4862722338121	3.52529140235815
Merged-chr6-146438230-4	15.5905768913049	-0.239467154819428	0.497088526894191	-0.481739452559121	0.629991045930857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86293116152246	3.25073256846474
Merged-chr13-37958681-8	54.3704967138939	1.34022919947452	0.344958602469456	3.88518851212932	0.000102250516225034	0.00322629755347228	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46982440046145	4.77748596133251
Merged-chr11-73131248-4	8.89974953633381	0	1.30478745910416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126537536-4	8.50397552521031	0	1.28617571889811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76690479-7	18.91174994841	-0.783091259505813	0.383224735686564	-2.04342566275862	0.041010319212813	0.321982496609453	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96843278202722	4.11893991793823
Merged-chr14-54351221-2	9.37340041518162	0.166388084111601	0.615141490039499	0.270487500527589	0.786785231799813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98710424914256	2.11480110409737
Merged-chr6-97235160-1	1.69160975093601	0	1.56768561233477	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115099703-1	3.04187641854663	0	1.32918577915603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160288103-1	2.64269892420296	0	1.37111700166731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133666280-3	12.6368743277745	1.01235119728427	0.443681193080346	2.28170860760588	0.0225065495555039	0.20566535970549	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27729447228934	4.35845088787205
Merged-chr10-39386398-3	7.14254086349067	0	1.293831677769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54024824-3	4.7682397276368	0	1.32542748745677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25225002-4	7.30296022972443	0	1.30103300616269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95416877-4	15.7565913474689	0	1.31188590586873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7217187-4	6.68418793883177	0	1.29568287511239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20645428-4	7.57573867024872	0	1.29576403363346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-62826379-2	3.75326421755927	0	1.31190155821356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77688952-7	18.9611970334453	2.13966878150033	0.461015828863321	4.64120459112193	3.46383953257143e-06	0.000217642363553281	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09162981575887	5.27562360484881
Merged-chr10-93049636-3	8.82699869397013	0.265620624620926	0.834148451931438	0.318433276482013	0.750156299916378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.964582177197551	1.31734301959449
Merged-chr5-77357882-4	7.34977312607423	0	1.29559238903531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130900436-2	6.52532224136096	0	1.301676587295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143044725-5	15.5040556935007	-0.826459327971935	0.450199771612135	-1.83576132216247	0.0663929641182295	0.456974366259724	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99114917523968	4.06646209889016
Merged-chr17-32143372-3	6.26337334850758	0	1.29355590951289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123940234-3	7.26336594574644	0	1.32728146674437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18925779-1	5.71646397495284	-0.829144245561819	0.63347451681247	-1.30888334661657	0.190573868546564	0.983669873254697	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9646379323879	2.70924337488271
Merged-chr9-41068014-7	25.1892671294833	0.783200734601139	0.359795079695809	2.17679667899656	0.0294957409556598	0.253076245862466	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15590481930077	4.77626724407839
Merged-chr6-17629958-3	5.75180043527821	0	1.32866649512821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51224184-2	5.14471796486342	0	1.34229853714089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117069873-2	3.64983656453614	0	1.34115848054127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16050365-4	11.7111740620771	-4.42298154960454	1.01372636566462	-4.36309215130726	1.28236894261468e-05	0.000617066869838723	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27626942217793	0
Merged-chr4-9060360-4	6.75811725931469	0	1.31624432504884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86507978-5	17.9520742490265	-1.76831989772681	0.505485994146061	-3.49825696103432	0.000468309695107149	0.0104908902862713	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80567697691097	2.99842317083879
Merged-chr8-41394599-3	14.0690052769819	1.16714256421851	0.597272200695235	1.95412169335847	0.0506868271503414	0.37455404353344	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9539042990827	5.37828864821693
Merged-chr4-149800264-1	5.62317068237905	-3.42642103110898	0.963464556413896	-3.55635400212586	0.000376037299709382	0.00882634101537688	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0890938901984	0.683637474991079
Merged-chr2-131166015-6	27.3128578140396	-0.245045001838092	0.430756469940294	-0.568871320428587	0.569443469601177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93296722070648	3.66055306184606
Merged-chr4-139238774-6	17.3919361836387	0.447705605938248	0.44176012123249	1.01345862702403	0.310841148359666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31611843956547	4.6828536569949
Merged-chr14-54376089-7	16.1320991490669	-0.336368145188771	0.396858802031004	-0.847576375948675	0.396673935529396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28514690009905	3.78266359850593
Merged-chr6-5174583-4	10.9889815498869	2.45095061911687	1.22234929329268	2.0051147675757	0.0449507790872438	0.34338947980302	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr6-145792599-2	5.30923076685652	0	1.34980838569104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150216096-4	9.61949888142186	-5.79972514570537	1.09416530478262	-5.30059317395155	1.15427039256468e-07	1.40151526834981e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5646562773873	0
Merged-chr12-30282753-3	15.7746403282071	1.23198940171057	0.436810702501065	2.82041945093497	0.00479609126395853	0.0629833962489217	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42602060028057	5.64465502793333
Merged-chr12-80785242-4	8.33350379563725	0	1.29154366620733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155187382-8	36.6232317009863	0.586614611814552	0.306673302826214	1.91283234115418	0.0557695194277086	0.401843093673288	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16177475626956	4.6689912478332
Merged-chr14-79394719-3	7.01795750745882	0	1.30272650346527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85458572-4	10.2601013106819	-2.12915381612656	0.980942205363978	-2.17051912384231	0.0299675414922053	0.256456410602208	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25857325094938	0.563523181795778
Merged-chr5-130455330-2	3.83479597796562	0	1.31561435947369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80846934-3	7.04574329176794	0	1.30202500713574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109685502-1	5.10738119361415	-0.103179078657078	0.764708947640916	-0.134925946630257	0.892670424688451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27078517869696	1.52944205045577
Merged-chr15-38691455-4	8.07861271092116	0	1.31333802257552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131861513-2	5.19992999563405	0	1.29537796321289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110556386-1	2.87111508184735	0	1.36526118408185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85162975-7	15.9181992937179	0.101932612683564	0.441033136226401	0.231122345036763	0.817219756195681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01580899529665	4.34171170443485
Merged-chr10-44626116-1	6.94739317008643	0	1.31901948455412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142489736-1	6.14955033423007	-1.20904305778171	0.612536574827063	-1.97382998414921	0.0484010782000333	0.362552815146089	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65924422293493	2.69949452834228
Merged-chr2-167007806-3	8.02815139207715	0	1.29802280181177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30810290-1	2.33900406071982	0	1.34779659992506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20467269-1	2.90152265066356	0	1.35479076759643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100526141-1	2.1717310588706	0	1.39357372535561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162521302-1	5.05371049182903	-1.22789274663533	1.24565436326321	-0.985741135621798	0.324260158009443	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	0
Merged-chr9-114975924-1	2.9352636938434	0.308795482038447	1.13359151835028	0.272404545234987	0.785310978212549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69301419535628	1.79958479173889
Merged-chr10-31557381-1	3.5966321940717	0	1.33410577671485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13834590-2	2.35619182187415	0	1.62632240736928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87750536-6	21.7916769246049	0.796899790640396	0.523519712742911	1.52219633997189	0.127959891942496	0.742006131766292	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81589450682772	4.00192300798013
Merged-chr4-53151149-1	2.49375978976268	0	1.35791944110054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52764697-1	3.06130433558438	1.01710300415436	1.21054330518207	0.840203733150535	0.400794165639981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0.733321818366247
Merged-chr3-8959076-2	3.33034213384922	0	1.39914055599608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5293886-4	6.30391613355421	0	1.31177422348603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42122969-1	1.93747894880504	0	1.42837959405728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5269351-1	3.13317313661494	0.520534337264621	0.901694476919056	0.577284602034164	0.563747213740211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47738935185674	1.40000983364339
Merged-chr5-143049395-1	2.3565451227496	0	1.44005838592946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152688179-3	4.79144061638096	0	1.32559794182889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131105702-2	9.8644518044285	-0.579826810527583	0.715059341440424	-0.810879289206366	0.417434994991915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87515869826973	1.58321107267933
Merged-chr1-166300019-2	3.24227988100143	0	1.31269343121221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38427211-1	1.66019861770699	0	1.75848516653515	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89299151-1	1.04282746263021	0	1.66856274414149	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5401570-4	6.2466194479134	0.287172200573818	0.870463153597918	0.329907359532495	0.741469962451185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34661565347015	1.15307255889252
Merged-chrY-90811926-1	4.86019263600583	0	1.68812094647435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13244476-4	12.8204312585729	0	1.35713668763245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122923130-7	29.1928826646785	0.21995154921579	0.385520632220163	0.570531200753428	0.568317466467247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11471847241008	4.31359636782255
Merged-chr19-55683919-6	24.138457217121	1.94094399072527	0.387759831824572	5.0055313403462	5.57081476654491e-07	5.06406435850039e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46678055946897	4.59449706186724
Merged-chr1-36612713-3	6.27854565895116	0	1.30669481256623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119300327-4	7.93239415185284	-2.69075685786506	1.04540481650472	-2.57388986102201	0.010056227977255	0.111454252612229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08563170856751	0.306240821987646
Merged-chr15-62096864-4	9.95111939279358	0	1.2868725792547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105339162-2	4.83508296680773	0	1.30279515122727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79611228-7	20.4094458124628	0.43605352702509	0.37339948051359	1.16779360920728	0.242890026584711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69645366136348	4.04453263204579
Merged-chr2-79087395-4	9.73314340161304	0	1.29876168620896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101092826-4	9.24356346045902	-0.0397456168196583	0.589488043591677	-0.0674239575369387	0.946244197226017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10026471627705	2.05637383168099
Merged-chr3-15876912-3	13.2842505466813	-1.90912019444582	0.453915762469312	-4.20589094342122	2.60055621607245e-05	0.00108446679320657	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60577133846551	3.71071768277815
Merged-chr1-138131278-3	5.93619797072856	0	1.31931335319591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125995046-4	8.33592782862315	0	1.30430037519205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141345024-3	7.20335404141721	0	1.3338877710328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5599161-2	5.05274967154341	0	1.42064127793756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150030799-4	12.1327122878513	-0.14268803237826	0.663880417226931	-0.214930322804635	0.829821643135453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50375511770454	1.57074540165941
Merged-chr1-162665735-8	22.1090766615751	0.678419089479424	0.383333423227267	1.76978851405089	0.07676237799727	0.509819202777382	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39047818846873	4.67770430892862
Merged-chr1-171442088-3	8.43244214704306	1.34062024089445	1.17001951226134	1.14581015687797	0.251873711652583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.480294765157217	0.581381506691384
Merged-chr17-26467739-6	16.2036673808478	-0.0525431804233932	0.326706085209369	-0.16082706384156	0.87222960883626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00633502520772	4.94934053891799
Merged-chr9-40500855-3	8.969320579367	-1.75736646530862	0.490797534899094	-3.58063425414296	0.000342761170132987	0.00827413055910977	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81124907460957	3.02626546409888
Merged-chr5-43102204-3	9.5320260137567	0	1.31270610286836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88242077-3	9.7581427894304	1.70279658916465	0.405954163884671	4.19455382073234	2.73409230095258e-05	0.00112720501891513	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14090489280787	4.73151000924109
Merged-chr5-74673005-4	11.8406215222033	-0.18209910654948	0.423449399938971	-0.430037465103799	0.667168388274862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62186216545288	4.44171381539846
Merged-chr2-128711033-4	14.0674571935704	0.782959785351903	0.579280669930728	1.35160696013822	0.176501082582087	0.931183573583811	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79400533187709	4.02135477184709
Merged-chr5-93198358-4	11.2461266591786	0	1.30222258148097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35694848-4	12.2899677259613	1.93406514571684	0.661026311110166	2.9258519868425	0.00343514330320402	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53216913661233	3.2127521710923
Merged-chr13-56113833-1	6.85195477576303	-3.93572971942065	0.931064649062142	-4.227128291666	2.36692728991943e-05	0.00100761713802655	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36535867808803	0.683637474991079
Merged-chr8-108827629-5	16.1465977585166	0.241336657437805	0.493686506147927	0.488845966888736	0.624950751968698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26226323741086	3.31463781495015
Merged-chr13-49243571-3	7.07650360922066	0	1.31328891380235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-72166285-3	9.12354135147164	0	1.30972092145179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81127747-1	3.35012672909507	0	1.33124187791265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96620991-4	8.56031295611299	0	1.28828395492203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172078145-3	6.26772909642952	-4.14773832722348	0.979157948813753	-4.23602579364081	2.2751065401707e-05	0.000974240576500618	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13574087262514	0.469435083901436
Merged-chr9-24899819-3	6.39067699555816	0	1.32474895724538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110970520-6	14.2637768667769	0	1.28833127223087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120120707-2	3.62484556551528	0	1.32444272870657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111081026-2	5.50216994507462	0	1.42970754348313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92801809-2	4.83056449806352	0	1.37519408331981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120467198-4	6.2939162251227	0	1.29731233891511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88428306-4	8.12080146283644	-1.13975554073177	0.739506536620551	-1.5412379530008	0.123258883634753	0.723178909993805	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47325334351356	2.16448544747254
Merged-chr9-123799987-4	6.11565360723407	0	1.30676003031772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9380936-4	6.59582587934375	0	1.30649281267657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26750158-2	5.52477452089613	0	1.3076973105221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89202373-2	10.9898314180212	0.382859054381607	0.557241451835881	0.687061332426444	0.492044079778344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09335431294239	2.91464579990038
Merged-chr9-37245732-2	8.06785022020313	0	1.29842402192227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83615697-4	5.47574561172846	0	1.32287004743044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127526870-4	6.90965838572591	0	1.3013291376445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39553180-5	13.6549708818036	0	1.28621255253875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45326148-3	6.26270035366757	0	1.31195956334767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8985606-3	6.01691000614466	0	1.30952496702843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87634292-4	8.42846182852671	0	1.29269763426714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87908967-4	11.4627807189534	0	1.31183056280502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36101534-4	6.16767091784575	0	1.3094791473389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-85695357-2	5.12162506220344	0	1.34671072013042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128770289-1	6.97501606504167	-1.05152244499756	0.708411472438188	-1.48433853192476	0.137719132904187	0.780519901019688	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14309089282883	1.69453213775868
Merged-chr1-90973440-4	6.79980099748218	0	1.29716127791885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5839988-2	5.74573257121161	0	1.34493431260112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69275520-2	3.13898197730856	0	1.37181588566409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16310535-2	2.19833762934387	0	1.49494861405086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59895375-2	2.99955018712909	0	1.41081898912326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24303390-2	6.26044018666665	-1.13895353346947	1.1818897527062	-0.963671553003642	0.335210620730661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994475741705525	0.306240821987646
Merged-chr8-125727482-2	4.58120153838134	0	1.32445146231092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131917145-2	3.50375396991259	0	1.37542283443072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-48863406-1	1.6459436861987	0	1.49319756683246	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99997494-2	2.87980923316501	0	1.35866532918265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88790438-2	3.37105487060036	0	1.33966133335332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55755631-2	6.53224023278011	0	1.33265202091018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57646228-2	2.22793464042642	0	1.5595414781648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5009862-4	11.1704112798014	0	1.29752724031883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54008969-8	25.7884973819754	0.458817331974122	0.508763683869712	0.901827993075895	0.367148247032674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52714793323525	3.44242388972463
Merged-chr3-126828055-4	11.2224499264714	-5.06156732529407	1.06981568605361	-4.73125173922756	2.23139594991866e-06	0.000152082112324277	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91207697088214	0
Merged-chr3-87522003-4	10.4416558158629	-3.43949497095878	0.728684466429807	-4.72014312012248	2.35678760645184e-06	0.000158769734980621	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69544768199574	1.15307255889252
Merged-chr13-42515145-3	5.03903441045985	0	1.32517393863419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34610675-4	16.6772904441789	-2.00457409691457	0.460466000115556	-4.35335963222368	1.34066948687029e-05	0.00063946998751114	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46792458330076	3.49150090948888
Merged-chr1-46921736-6	31.9922115469794	1.02254233116739	0.378361839846782	2.70255142955609	0.00688095384437301	0.0830979134936978	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35102521556504	4.29639668011389
Merged-chr17-84074204-3	6.90470917117391	0	1.28698112815392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69260158-3	5.93252804449572	0	1.29756242352305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22710883-4	6.01856362728557	0	1.30277855284743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9786799-4	6.50208748740862	0	1.32096388503559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22843035-4	10.0959355295085	0	1.32059491514046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88622288-4	5.80094558492782	0	1.30794895114967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75698241-9	44.9231727699197	-0.243795584116087	0.255959678580301	-0.952476520787637	0.340855367945969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03599519832188	4.84444102389487
Merged-chr4-139265251-2	6.5139348421849	-2.21464619449227	0.984863525864262	-2.2486833315802	0.0245326504074979	0.219483922991287	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75864591778494	1.40264952818025
Merged-chr1-80723508-3	8.08454297446331	0	1.33079551437579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61914023-3	4.94200675688816	0	1.38094754057865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93119115-6	18.7429864757609	0	1.28266829756733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100626367-3	5.38665541392115	0	1.37026658329158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105244805-1	2.63372038843613	0	1.49596398912028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63830903-4	6.93530835854926	3.85484008017211	1.05776377705979	3.64432982464875	0.000268089448014404	0.00683251679795212	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.16454203713377
Merged-chr16-28935262-1	4.29825543395731	-5.66952783850932	1.11531370550251	-5.08334812935423	3.7083910884475e-07	3.68280431710776e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37175256909432	0
Merged-chr13-100145318-4	8.28922193495027	0	1.3108507441064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144312364-3	6.56306913407724	0	1.3088630238908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83093589-3	18.9882038418867	-1.21637003301674	0.518235792852471	-2.34713628389425	0.018918333615042	0.179473992805145	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30899859277141	3.89990859594029
Merged-chr3-9850002-6	19.0911347708752	-0.896974597158284	0.445166264814042	-2.01492041975143	0.0439129880665431	0.338388803758871	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20873824218487	3.38900951003059
Merged-chr3-127527750-6	23.3745545278798	2.49995863849198	0.509486456908954	4.90682059275763	9.25646308605272e-07	7.54205532196011e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95841146325784	4.80446288426714
Merged-chr13-112666688-9	35.856549328366	0.205455403523421	0.338372954563128	0.607186244505515	0.543727319874086	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9665464977637	4.15630615079366
Merged-chr4-109458337-2	4.03356113123455	0	1.32883885240314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75777121-8	46.6252050390454	-0.957767370581583	0.544397706349413	-1.75931558750333	0.078523920487501	0.518619780490827	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17322337028857	1.30806904914164
Merged-chr10-51456629-4	7.92730926403693	0	1.29819580917008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57502397-11	89.9302159252554	1.36787680800378	0.240119709372338	5.69664527572247	1.22187779596894e-08	2.11789990597842e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86922771041173	6.20421447662502
Merged-chr18-5101554-3	9.83104557533945	0	1.30970347576709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94879987-3	9.71254840068692	-1.07609432643832	0.582419429961283	-1.84762779378746	0.0646562060934558	0.44789827662281	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68789491874189	2.75392115242731
Merged-chr18-36691557-6	20.7038845555981	0.591685725734582	0.393989016516812	1.501782285622	0.133153344662095	0.763084945751736	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38944739036971	3.93919281433503
Merged-chr3-14893169-3	9.52808131164979	-6.16486945335798	1.0728023102993	-5.74651023228877	9.11041202973493e-09	1.62696518097095e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9308047519593	0
Merged-chr10-8736096-6	17.5593491274859	-0.825728976736343	0.529503004663678	-1.55944153189615	0.118891912849095	0.705897777306649	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8025827262001	2.91528692632208
Merged-chr9-59547270-4	5.6891643318252	0	1.33015207408901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14537340-3	5.23505991383006	0	1.35941390230174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58850714-1	3.10630423776592	0	1.32803652329404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105397647-4	5.76398019439406	0	1.30455419958975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88096911-2	3.61492335260745	0	1.31775161274218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80320102-2	4.6595040125687	0	1.33169832387969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32541464-7	26.0899493346616	0.0153378434414678	0.335071899710897	0.0457747828293014	0.963489758123456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08337070439874	4.07559320553224
Merged-chr17-52725370-4	5.76625868735779	0	1.3085402461687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99364692-5	15.4946949132016	-0.892227742672067	0.521606854095479	-1.71053684526305	0.0871666461096524	0.558814054417869	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07798121821682	2.70930074590981
Merged-chr14-44049731-2	4.66123481670542	0	1.3100398636451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108644751-4	6.00068873809145	0	1.29753089502352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110268674-3	6.72676831073312	0	1.30183321686358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74855611-4	8.33742614670387	0	1.30412376741872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71486355-16	58.1992846098702	0.428672422242656	0.258992605286292	1.65515313369198	0.0978934391515551	0.610745147488784	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85574421629129	5.35577919615152
Merged-chr7-35150102-4	15.5176627435886	-1.20525114614619	0.376047110957206	-3.20505359841295	0.00135037332045568	0.0239048816874289	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86944595635264	3.69741472196892
Merged-chr8-46894528-3	5.85895880845429	0	1.32799608776855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75541770-3	4.07726549713753	0	1.34455682888104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31445654-1	3.42754550254526	0	1.33799129684873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9338283-2	7.8160061924058	0.697611705030521	0.584748262077627	1.1930120194832	0.232864665789549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51674032121034	3.38969088807973
Merged-chr12-87375852-1	3.33127607525182	0	1.32083797959109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91636639-2	7.70373359903989	-2.37395772992748	0.688749330698581	-3.44676593372459	0.000567339888139523	0.01212341148802	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32803832982221	2.05066483796074
Merged-chr15-38553660-3	5.71312528740958	0	1.29994841226972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113507154-1	2.91425697051011	0	1.4302720942526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10136565-2	3.00692463013467	0	1.37937456862612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61519313-1	2.32182686731759	0	1.51771536588406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6534049-1	2.9768458926973	0	1.34260193796447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19119067-1	2.10358029830735	-3.81387694077915	1.19606703561313	-3.18868159327214	0.00142923209236765	0.0249851793225939	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4162951206453	0
Merged-chr7-82691629-4	6.3490036038334	0	1.33075912780728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171562910-1	1.6717763235012	0	1.41369670895073	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48323278-4	6.17575329581445	0	1.29917020106852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154036953-2	6.52869908101814	0	1.30724774919853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32111333-1	2.50063246024075	0	1.4333232489315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84393491-2	6.81216371401082	-0.627892506099388	0.875739092711545	-0.716985813840111	0.473382850005771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96724497834052	1.26857811924232
Merged-chr9-45084697-3	9.07544519649861	0	1.2940998460013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88061148-1	1.21076930018501	0	1.68569269746056	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157501465-6	38.0441731668309	-0.734671519207792	0.603570095429056	-1.21720993927895	0.223524349499056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90025646780935	1.69486619385668
Merged-chr19-47508087-1	7.51493354209501	0	1.30604749583884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98977517-2	5.14485796255725	0	1.30804966415739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119258213-1	2.09082705995816	0	1.41941871301603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191592494-2	3.26911500482563	0	1.38107779839504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50345356-4	8.84041443600906	0.957293020949389	1.13199373479295	0.845669893327181	0.397736922905204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	0.733321818366247
Merged-chr1-67044140-1	2.76835945077241	0	1.36192617817591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72764081-1	1.95859289844055	0	1.41894651767781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128305558-1	1.42524903292951	0	1.83899066797175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35571026-1	4.35296026260584	-0.0622864147398893	0.726408787065661	-0.0857456790844949	0.931668589160262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47903530825143	2.08628700317133
Merged-chr13-63113045-1	3.87607958334629	-3.12533236959946	1.05820265327013	-2.95343463744051	0.00314259151242288	0.0459203454764726	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64535341963321	0.306240821987646
Merged-chr18-38385097-5	16.9070794780262	0	1.28311063965739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32402763-2	2.14480360801538	0	1.4364742534845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10229313-3	4.47474391109183	0	1.34874606624281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71275925-3	6.46866709266336	0	1.29921457761498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17772689-1	3.66641051236334	0	1.33803317716264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31924176-1	2.9774675367801	0	1.52485987787807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15214708-1	1.58568996013829	0	1.53628493438867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-65496624-1	2.06866026620926	0	1.3941060754663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154902971-4	11.92566115838	-5.67860207627781	1.03310452777301	-5.49663845585766	3.87099188598545e-08	5.55942496223308e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16668519709191	0.423054662900563
Merged-chr13-95503610-5	22.9352346033907	-0.0178562723234235	0.634691275757069	-0.0281337919796114	0.97755544263122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69405017588015	1.88772579123251
Merged-chr7-109646694-4	7.53511207753763	0	1.30577464895649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20932785-4	10.4461921262515	0	1.29465329435274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77627712-4	6.6430654607709	0	1.30372177643736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41374763-3	7.01123634548238	0.674109223488217	0.972825342117722	0.692939620611408	0.488347443993161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	1.04220233489076
Merged-chr2-113431076-3	6.18331426608485	0.107042440779803	1.29504798811592	0.0826551925195701	0.934125714089286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr13-81125310-4	7.69284181510994	0	1.30505205966527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131103563-2	13.3900433759473	-1.40617128901509	0.544764104037008	-2.58124806424389	0.00984438156205315	0.10968821363289	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30446718122778	2.44181999537264
Merged-chr3-109451612-8	21.4573667271067	0.795084943642175	0.341562218233785	2.32778949543527	0.0199232841431616	0.186747431514317	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04857981770128	4.87648470256751
Merged-chr5-105800386-6	21.2188744618461	-1.10395143067785	0.480897049080554	-2.29560866049924	0.0216982671436113	0.199675392869515	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02281206787516	3.76998571571298
Merged-chr10-56174016-3	5.60641652171627	0	1.33693412256812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122131823-4	9.87073791417918	0	1.29044160653794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115486913-2	6.26466312144903	0	1.31193010524788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68475423-3	4.14952842385743	0	1.31951499068311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34043328-8	19.7077379216707	0.134496024249253	0.39791902601829	0.337998475707646	0.735364336461573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98463037545254	3.7169525684095
Merged-chr18-62092767-5	12.684807356975	-0.0306463211644782	0.437524982531822	-0.0700447343306831	0.94415805420333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72464951321819	3.52529140235815
Merged-chr4-8857638-5	14.2319205782337	-1.0030548075645	0.746762903853682	-1.34320385009515	0.179205975336567	0.941235905044104	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39074466461265	1.20440436174322
Merged-chr16-52056339-4	6.91574900705804	0	1.31222867877189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46991296-4	6.20561150901729	0	1.29323019160294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100031672-3	6.3646470636716	0	1.33527179274771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75929144-3	11.8238031160975	1.16193434919429	0.587700510798137	1.97708582491497	0.0480319297805119	0.360438043573419	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4952622299786	5.20614753824208
Merged-chr11-63230952-3	4.90443342370575	0	1.32606943888202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99674344-1	2.98068265528883	0	1.38421668740477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112298819-1	3.71069515802473	0	1.36046605761871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22962925-2	7.73860234386574	0.556273622889432	0.601546636305079	0.924738980017025	0.355101698023977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68299018413627	2.57804496846817
Merged-chr6-145193644-8	26.4722036880323	-1.25299216005485	0.343088720237142	-3.65209371846672	0.000260110917358093	0.00667342285264309	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.53850526428533	4.1836622193263
Merged-chr10-49075545-6	23.6082799056366	1.7518984131086	0.533706700008972	3.28251156127355	0.00102886766571665	0.0194369431870252	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98871538974901	4.1841714251321
Merged-chr3-68976218-4	6.87332561012134	0	1.29602785198933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21635004-4	7.0998145830195	0	1.29073921690031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45371168-4	18.2121695657415	-1.5271793218967	0.43259598922897	-3.53026694634558	0.000415140574956936	0.00955907643457891	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41925573789829	3.77881170565112
Merged-chr14-67884978-16	82.9049028473082	1.24562587844789	0.243732763625629	5.11062140320683	3.21100890087865e-07	3.24306936069267e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38104591359988	6.54817726448661
Merged-chr12-34688994-1	5.16059418919894	0.0343796632074576	0.831230459739616	0.0413599655843062	0.96700892830461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82904305593242	2.08364730863447
Merged-chr11-61638929-4	5.32760312885204	0	1.30873744234586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-101120442-2	3.80352443378056	0	1.37899682675968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120325087-3	4.16059153626555	0	1.31603826298576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68656546-3	8.05981427707855	0	1.31172439203403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60982760-3	4.40210777668176	0	1.33108399923034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34682239-3	6.20522563793822	0	1.30812159884421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34451430-3	4.3287513269937	0	1.34893475153882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105709694-2	4.78690017937605	0	1.3076960106893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119395149-5	17.8230670317272	0.104803772754992	0.576075597709245	0.181927117155703	0.855639923193142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58508222814178	2.52879699405213
Merged-chr15-66865931-7	27.5231880967366	-0.141860940031691	0.324392992159853	-0.437311974858522	0.661885112068849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28385555527447	5.19388255869183
Merged-chr6-34955693-4	6.89439284152441	0	1.30098597267709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115514949-6	22.8261041346325	1.69209770267666	0.497746072447709	3.39951994870722	0.000675042554120892	0.0138977097484511	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86442135693858	5.57482426092597
Merged-chr4-127151316-4	8.54250456953882	0	1.30019710366478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107280338-10	44.4051806073828	1.01467262684599	0.283745366462937	3.57599716779351	0.000348895427766328	0.00838195611133033	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30961143824661	5.3023432026689
Merged-chr15-63613279-2	3.588989329531	0	1.32841169947535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174181492-2	7.929234029225	-0.326276651087969	0.71905285578278	-0.453758925319579	0.65000235013609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42360437448609	2.10903476705634
Merged-chr7-112183433-1	3.51172084718369	0	1.31822957579856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97107017-7	25.4935540738056	0.10374589048349	0.290620751816019	0.356980325166757	0.721106534876912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29189187769208	5.4091977158076
Merged-chr6-93127628-4	19.3805123185227	0	1.28075338502544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134863223-5	13.3262049752143	2.04099495068882	1.04818199390193	1.94717612262264	0.0515136232708593	0.378821654991849	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.20539659680455
Merged-chr1-36121392-4	7.32324890789764	0	1.3038658448777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60669319-6	17.9061494898537	-0.820025817001553	0.372066210035262	-2.20397820302961	0.0275258770394439	0.239795488737435	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67540532031222	3.65996102425304
Merged-chr11-117175068-4	9.09601459114663	0	1.28702180434707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21054664-4	5.16254859698476	0	1.32172405529257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12009644-4	12.2928674862447	0.995553696269107	0.665213600326134	1.49659251672097	0.134499318486314	0.767731696873402	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66436367543849	2.21307952544685
Merged-chr3-135607361-4	13.5047517396224	0	1.29772769052146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96896039-5	18.5272956343768	1.64370086356485	0.436253423736363	3.76776610596452	0.000164714919639459	0.00470500599299947	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06147948018894	4.41809060211745
Merged-chr12-27313097-4	16.611635335524	0.209229165944515	0.352499975108497	0.593557959486708	0.552807806473053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20766501121761	5.38231040532441
Merged-chr2-169873628-1	3.5799927562211	0	1.35761726011144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75832206-1	2.87554193632707	0	1.39842431096879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30633247-4	7.17948560956319	0	1.3112273600292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25485753-3	6.6889453871918	0	1.28916532721776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107431400-4	6.67308268947219	-2.90474414465955	0.904195661140938	-3.2125172343719	0.00131577253894455	0.023466286116231	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43503654027379	0.581381506691384
Merged-chr18-20694186-3	5.19314532034203	0	1.33470434839547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20649136-2	3.85253081096968	0	1.36239100803522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40129359-1	3.15447261354961	0	1.38854303066621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11000109-6	66.9016071846772	1.95294339834836	0.588605741366298	3.31791428642048	0.00090692310445074	0.0176380348760232	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34336154576643	3.05788074862523
Merged-chr18-20789609-1	2.63292858199996	0	1.38237547496707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77858575-3	6.83711887290027	0	1.31979955290389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11347917-1	2.83415013054633	0	1.3856263761548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117147491-4	13.5260469577841	-0.955244291022621	0.467571801233446	-2.04298952268444	0.0410534753010309	0.322243891534074	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28546015832934	3.28399919411966
Merged-chr11-90492279-4	6.03958303790326	0	1.30355832177464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36190561-4	6.7710234720222	0	1.29641699567276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80694821-3	8.8779697442832	0	1.33245746877373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77737890-6	18.3572014747584	0.527727012180983	0.446804156350526	1.18111482330744	0.237557112034182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68795869410124	4.38939402221196
Merged-chr1-133034028-13	46.400283126533	0.723411170638997	0.209919404072191	3.44613769192207	0.000568660531359025	0.0121436898961395	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.52508632165225	6.2222882459255
Merged-chr7-123312088-4	6.68048475021705	0	1.29981314085131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115711390-4	8.06263543166801	0	1.29287464566836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113733758-4	6.00151013103237	0	1.31111178397643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73334036-4	11.7824988302175	0	1.28778789017632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93365007-6	29.415631346111	1.36558735405379	0.287526564009339	4.74943022659094	2.03990560659857e-06	0.000143254408761521	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44094813108514	5.93187464946342
Merged-chr7-106592554-2	7.72676785171837	0.720697145673201	0.670532831651273	1.07481261416893	0.282458631770949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89212087358679	4.49248090806776
Merged-chr4-133805129-17	79.1602714224566	1.55733638861597	0.218458484115141	7.12875215134767	1.01282920029978e-12	6.82312751781337e-10	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66425290622629	6.32128862803293
Merged-chr14-51220164-4	10.3981129442324	-1.36067308158667	0.62766569158769	-2.16783090078545	0.0301715548205405	0.257724238078828	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2691551142375	2.58197412052501
Merged-chr1-181126946-4	5.09814703321386	0	1.317088403395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102895016-4	7.04514621462588	0	1.31704506846485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102339286-2	8.28932248823645	-0.183664420621406	0.641762067539372	-0.286187716462595	0.774734351317827	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74603208206354	3.66812819295265
Merged-chr8-111343362-11	37.8981825549967	0.397130246048611	0.348257734267141	1.14033431844469	0.25414704539389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47284514824723	4.94392328324938
Merged-chr6-146141454-4	9.58985016715531	0	1.321951655769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11589531-2	4.44598068623638	0	1.36149298384553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102524374-4	6.83667791720215	0	1.29919708404153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113655175-3	4.93278015042965	0	1.34013728241144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24619868-3	6.97026841475742	0	1.29676123337095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25215410-4	8.01572484289492	0	1.2952834485268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169994174-3	12.461950941418	2.03835164591693	1.05638380386993	1.92955594212036	0.0536618822610143	0.390271492290288	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.14490468848716
Merged-chr12-80013950-3	5.12420237015762	0	1.33067775672639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9186636-3	6.27521400313472	0	1.33531938011286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53218885-1	3.32922930025364	0	1.35664330035736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32599442-1	2.40924677321435	0	1.40525014366509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45031927-3	8.19250525617928	0	1.2940543827467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45346552-3	5.00099528600009	0	1.32124708043944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45343774-3	4.3590164777737	0	1.32207307387106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87813798-3	9.19231584777051	0	1.30761306640718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4347172-3	5.51527721008314	0	1.34620112379174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-28424552-4	8.56450418349755	0	1.2979873096003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65740642-3	8.37198476543981	-0.306978006346139	0.813081183564035	-0.377549022842394	0.705765640211325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13797663660725	1.41959898789419
Merged-chr4-147928661-3	10.1697620946363	0	1.30150986636643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68234759-4	7.18630041642236	0	1.30582276468595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83643839-2	7.40449305522628	1.23137336092132	0.73478223996296	1.67583440909431	0.093770632205655	0.590833644982232	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27919412398068	2.18069501644732
Merged-chr14-41021009-3	5.98610936520327	0	1.31289364432519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53307353-4	9.26757364282852	0	1.28783076247565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165120533-4	6.49167860722523	0	1.29455251135291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138075296-4	9.38763667223822	-2.06050194986129	0.691528873186738	-2.97963256453195	0.00288594326476348	0.0431569599335007	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63149887250392	1.60572551668653
Merged-chr14-103929559-4	6.23288419540991	0	1.31059097558524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96875764-6	24.9185732957231	0.164046280361004	0.444544873291332	0.369020745074471	0.712112262034743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44617026653488	3.09200755069543
Merged-chr11-59534700-8	15.3271153220111	0	1.28226101631781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59286489-4	9.78575013182025	0	1.31249678344278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191021341-4	6.72043770862589	0	1.30670206980022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75151056-3	10.2839578665909	1.50606633806702	0.765476742316713	1.96748804347591	0.0491269730036641	0.36619178284757	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35253842388449	3.14177717422059
Merged-chr1-131702642-6	21.868868618535	1.18403480072377	0.469033268963852	2.52441538601182	0.0115890900011148	0.124045974645839	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0785072332722	4.46341338959775
Merged-chr8-35658490-5	13.8306916545558	0.411602141476649	0.443691302162868	0.92767683177517	0.353575229865933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51793315832939	4.86759425903045
Merged-chr8-126686970-3	10.9493997047552	-2.58944867203234	0.570633847687241	-4.53784626083309	5.68316667522039e-06	0.000320626150561494	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69620701733495	2.05066483796074
Merged-chr10-21669104-4	11.4913411438332	0	1.2918648028748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163703130-4	7.96036110013955	0	1.30607605244751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102531216-4	11.7558425388586	-1.07739156686894	0.923245622809103	-1.16696092594604	0.243226149578746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49570630015849	0.733321818366247
Merged-chr6-5425672-4	6.94365680859071	0	1.32566263410404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12102313-4	6.53332759654691	0	1.30146379273593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25448125-4	6.64498603549987	0	1.29598269761992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105198916-4	10.5810519226483	-0.352994416728483	0.410164772348371	-0.860616124362502	0.389449502254981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82248271776013	4.41007454815097
Merged-chr8-3711886-3	7.4096692375974	0	1.30782489886295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74868802-2	4.8612914618556	0	1.33580938753574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105865189-3	5.96810692781151	0	1.36148647702572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68983008-3	4.07181609354586	0	1.3417442843998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83843729-3	4.90813341995307	0	1.34241896742596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42449759-3	19.3365644699594	0.522501631008141	0.622445091149761	0.839434093765593	0.401225758551829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96258296323375	2.44033112747142
Merged-chrX-95176002-1	1.59758586007218	0	1.46586046720236	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23261667-2	4.31109139817741	0	1.35880346641645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50834709-3	13.5159269213116	-0.565792879464583	0.551749216827358	-1.02545298155198	0.305149500016161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16428926854157	2.31742847155177
Merged-chr16-91416364-1	2.92066986625319	0	1.37467879759263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103013349-3	5.9484696779545	0	1.3261525459017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37851856-3	3.95371876287904	0	1.34683317654199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34695021-1	1.822249599357	0	1.42156636645818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27366354-1	3.22630684701753	0	1.3858894947599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71257024-2	2.18570215239258	0	1.44044602751706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72429821-2	11.3217914906852	2.1103755989575	0.724919507399268	2.91118610744621	0.00360059482806652	0.0506750957645563	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44663216482751	3.64205250841407
Merged-chr4-3737142-1	3.0211129026165	0	1.42151448525765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96880146-1	3.44282486520125	0.338422518752576	1.34792894440977	0.251068515262698	0.801761137579879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0.469435083901436
Merged-chr6-100259808-1	1.82056107391569	0	1.59899479732387	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45855771-1	1.34672272535461	0	1.71753280129143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6057014-3	5.10678724762696	0	1.31773777472547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137997454-2	8.71001854217629	-0.0859094193352146	0.570932333441166	-0.150472156336662	0.880392116632789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8652546095945	3.7682980464329
Merged-chr10-75329951-1	2.47148002399371	0	1.42133099668881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90656007-1	3.29709705741528	2.5053772674674	1.17548638474835	2.13135371023778	0.0330600133266771	0.275975936490169	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.66210910851734
Merged-chr16-57521059-2	3.10415453787963	0	1.37766470227045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62616097-1	2.14892511670361	0	1.39987649261875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41326426-1	2.55962594484839	0	1.34803152214822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88718860-1	3.10071911450106	0	1.31726603268033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123146112-2	3.10226046026555	0	1.4116957804961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-26506990-4	6.63649654267078	0	1.30896806867643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19305156-1	3.28154751899468	0	1.43884334035517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32055773-1	1.41900730644309	0	1.89679612731698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6707455-1	2.18572263528635	0	1.45768179010391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10318955-4	9.04297693120195	0	1.30286735508675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-48832235-3	6.19280473995666	0	1.32004647120536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114461792-3	15.6105275993182	4.49129189021761	0.938306184572293	4.7865952117377	1.69634482668824e-06	0.00012354120863805	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	3.7498389217159
Merged-chr19-57591009-3	6.40435203743473	0	1.30023197777041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31867050-2	4.76441550523049	0	1.31473835912099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120027458-3	5.70494884367896	0	1.32458196024314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67577563-2	7.63264003868253	-0.0895147098571314	0.713212492657462	-0.125509172622027	0.900120463758951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21594724344074	3.529316372772
Merged-chr14-33320321-4	7.49993816357193	0	1.30063351872027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43772038-4	6.18590902590532	0	1.32414550256533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9075025-3	6.37910561837173	0	1.39276354572456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103778455-4	8.20523060262179	0	1.31165300724919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50065061-7	17.7352797894502	-0.349691571491539	0.406590223421692	-0.860058976698165	0.389756533219735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78096993264894	4.19723125938913
Merged-chr10-41896620-3	4.37937812619442	0	1.35807986208367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30614546-3	8.01437081060394	-0.145007644122384	0.650068043591304	-0.223065332240127	0.823484659433339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65737487558991	3.41763903959556
Merged-chr6-28410188-3	4.51463014882826	0	1.3261299790873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84186771-7	27.9762820615713	0.905583557401312	0.316376850340464	2.86235720605595	0.00420502693051672	0.0569850041065006	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72080497996858	5.57953879183006
Merged-chr14-105732692-6	19.544453732147	0	1.27967220882861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111726301-4	12.4136329687312	0	1.29169938598978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55122122-4	5.8869167182206	0	1.30471216907867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56655841-1	2.87844958888249	0	1.34420865176207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59393390-4	8.71461484730254	0	1.29866027455548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106030590-5	19.2053362102594	0.651386858601158	0.497240853033749	1.31000269713749	0.190194923167949	0.982488335915638	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44901319705183	2.63196310254127
Merged-chr9-96391484-5	15.8768818777558	-0.250218698117107	0.451406353421462	-0.554309207702902	0.57936724985846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48669509274976	2.69464892974524
Merged-chr10-117905858-8	24.7229118901005	0.896689143024552	0.305664243520143	2.93357552292655	0.00335082122484253	0.0482084464461823	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94872026862852	4.7757602325158
Merged-chr19-21644123-3	8.45142627217613	0	1.33952462331486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43877087-3	5.20826313013384	0	1.33181482894786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25798004-1	3.60673808140595	0	1.32353855520235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141454790-3	5.75466495613237	0	1.33670318715279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53318123-3	5.20423159770968	0	1.33908834673575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84671991-3	6.66368095696786	0	1.31860133347373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43058686-9	37.7514507058759	0.995114403105796	0.277710831772133	3.58327544070123	0.000339312476954078	0.00823346198256263	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56045249177221	5.59484866763622
Merged-chr7-16295649-6	44.853359185726	0.0158398354013502	0.35400220064807	0.0447450195856191	0.964310549171709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03979059579103	3.88572805655479
Merged-chr9-52175619-6	22.2005158406131	-3.17729891435067	0.616057518663635	-5.15747120697908	2.50307325648893e-07	2.65528936718385e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23800996259507	1.89200393807192
Merged-chr2-116980087-2	7.09224183662355	0	1.29833239364706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40910954-4	9.31612152050387	2.40728068329297	1.19274168960341	2.0182749578355	0.0435626332767857	0.336244251606997	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr5-116011876-4	11.9396943263289	2.50981987754302	0.699016519975992	3.59050152009171	0.000330042305488359	0.00806240915680087	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00438675778585	2.71574336225217
Merged-chr7-79696720-4	9.27177317514247	2.46709706571572	1.05288862205428	2.34317003151025	0.0191206670236049	0.18100233338034	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.40000983364339
Merged-chr19-58119013-3	13.4179312347586	-0.63811786854964	0.421568317919685	-1.51367605539847	0.130108020839724	0.750466831123009	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28560903410248	3.72673312836171
Merged-chr18-9392826-6	18.6007352071234	0.861818464497216	0.516461747906497	1.66869757148644	0.095177330685282	0.597278195617059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24508834055529	3.44644068734319
Merged-chr11-78475446-3	6.84726647306205	0	1.30996228696597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111553414-6	29.6882635814929	0.280081968670281	0.416487751606789	0.6724854874837	0.501274676012104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18358713955343	3.60773013735124
Merged-chr16-33833908-4	7.18050652673584	0	1.2886529734418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107526854-4	13.9695824946453	-0.72034719505497	0.463190013678323	-1.5551872315521	0.119901484363246	0.710214140427907	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08940062590576	3.48369228771169
Merged-chr18-62227819-7	23.8167630317124	0.0266785215749085	0.359431609015962	0.0742241942714718	0.940831994702338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49395395902429	4.4065012742002
Merged-chr6-121272419-9	23.4943018889082	0.386917061342533	0.392220534528961	0.986478338792748	0.32389843962449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38600265064023	3.05861818212193
Merged-chr13-10112403-2	3.20468175093772	0	1.40435064286224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78856507-3	5.2131793500372	0	1.31991832252605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62623077-2	5.34799499607912	0	1.30550111003385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64393042-2	2.44542702146898	0	1.59956560155481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94851903-1	3.34305930689518	1.74399434163158	1.18724797942712	1.46893856367993	0.141849453619406	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.27465395918041
Merged-chr17-50442273-2	8.08322191134612	-1.00484194917377	0.960308337474831	-1.04637428413465	0.295388260856454	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84864738901375	0.683637474991079
Merged-chr14-32781648-2	3.54272828271385	0	1.33398092688529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32447353-2	3.89234451142397	0	1.3799281173741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84570614-1	2.70136210236307	0	1.3759422137293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119220378-1	2.47888295402664	0	1.40632869453899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133711781-2	3.66718706207252	0	1.35126155677998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75634326-3	7.82083473536286	-1.30948647192914	0.631845095384923	-2.07248023525671	0.0382206775989703	0.305774779429764	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59726271911573	2.62400334963741
Merged-chr4-133185363-8	26.57018676261	-0.521639766928745	0.435124719883968	-1.19882815912607	0.230594770792062	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80052799245559	4.29844691818226
Merged-chr5-86086978-4	8.28127873707241	0	1.31047848779686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73732113-4	11.0518985993849	0	1.28889923672899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95954383-4	5.8336892180463	0	1.31176208963447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86536035-4	5.44856161692164	0	1.29586074836469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36566594-4	8.29246543234484	0	1.32768645433703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105502501-2	5.66995419225027	0	1.32599590285669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27765106-4	18.2152528676951	0	1.28186165791023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76154025-2	6.92296290559186	-1.35784582435254	0.785851603027351	-1.72786543810776	0.084012351995815	0.544144231689813	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20543916958	1.41926493179619
Merged-chr6-125410657-2	5.78677624439483	0	1.30409091261804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24717094-2	6.41006964556033	-1.63277776063631	0.856507016814668	-1.90632152286221	0.0566085034958142	0.406320218523449	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10004165969439	1.26637849737819
Merged-chr12-91711008-2	4.71887121492739	0	1.31487061923261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102894463-2	4.58792813336767	0	1.35728259591412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136355157-2	4.43481003387028	0	1.33085631869224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96713355-4	6.98586533691683	0	1.30695751572583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122191180-1	4.09497377034665	0	1.32042044707537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164679381-5	14.1663233267193	0.228374225365292	0.694757722252464	0.328710596587373	0.742374444119788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79431605962837	2.16430127775811
Merged-chr14-103840669-3	8.99777157102033	0	1.33301054027275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62762523-1	3.69303898803335	0	1.33501057993421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79485491-3	22.9679338928841	-0.850343652955201	1.22999944687513	-0.691336614106242	0.489354027506403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0
Merged-chr9-45253199-3	12.0314306960774	0	1.32843638415716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169918689-5	15.5521529539018	-1.34389335184627	0.558440810705417	-2.40650992206081	0.0161057665181606	0.158253672715072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43049319525845	1.77796484182175
Merged-chr12-82261784-4	7.63360311814559	0	1.29803435184902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81538361-4	7.2478927220581	0	1.30656063030379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68557042-4	11.8104277483783	-1.62914766317236	0.686425945944139	-2.37337716151093	0.0176262549487284	0.169897677194482	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68073220449131	2.37947766684629
Merged-chr9-97106693-1	3.51405161091685	0	1.33017919042966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99067415-4	10.5817001568695	-0.70643559354261	0.467754784067437	-1.51026909313398	0.130974774734768	0.754201412567688	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1863506694132	3.02473920353734
Merged-chr16-11286038-4	17.1151440617223	0	1.33542341899241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118610176-7	23.1130701817089	-0.38807388786282	0.425004603860589	-0.913105138950723	0.361187247841102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02161982107117	3.62344383809729
Merged-chr7-100100214-3	8.5998865955403	-3.77866867610585	0.890472877447125	-4.24344050426199	2.20118750612747e-05	0.000947617909346184	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40857800275599	0.73596151290311
Merged-chr4-144956058-3	5.92889777990448	0	1.30419883096411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114797760-3	8.51555204716429	-0.878162189582483	0.728848351068433	-1.20486269646514	0.22825631149093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32902953549424	2.02614048505023
Merged-chr16-55686627-2	3.56920059858642	0	1.34525398946456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101254221-4	5.62659282092343	0	1.30679559709467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36035788-3	7.5015614236681	-0.595557152855828	0.531998132266475	-1.11947226265358	0.262938717642491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45570712669015	2.99127408015803
Merged-chr7-3957547-1	3.6177455345841	0	1.34486573307449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167844194-3	4.53566100410693	0	1.33028769195157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17711551-2	3.30640807923856	0	1.39058468765302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80392302-4	10.2608877687498	-1.98710291184457	0.613490197393309	-3.23901330500092	0.00119943978113082	0.0218385600272429	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09988357756205	1.99834080004871
Merged-chr1-45865518-3	8.14645686010787	0	1.32702152246579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30942818-3	8.29409974523946	0	1.2954793768637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25790851-3	5.40363613698262	0	1.3277782159021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29736292-1	5.48690411527709	-2.06762213726923	0.820003700216368	-2.52147903323322	0.0116862639638323	0.12477566812448	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13777614871829	1.486851288245
Merged-chr5-102061372-8	26.3723471088238	-0.0993335665963292	0.332268440488733	-0.298955767361533	0.764973795462045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28243365383359	4.17481679821681
Merged-chr11-50154378-4	9.09387213764975	0	1.29309747055658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89123545-4	11.3209184680508	0	1.31550459614941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139161297-8	26.327688815079	0.0579042619864744	0.322211755580628	0.179708719447962	0.857381247763996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37471170253967	4.48414690454648
Merged-chr5-122547438-7	26.0231195400608	-0.600043571781752	0.334888884427989	-1.7917691499575	0.0731699524674687	0.492061718013709	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11300808839121	3.67922913868038
Merged-chr5-23887288-4	7.23583887691479	0	1.32382418275593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116681665-4	9.8506699769732	0	1.29213300205544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31059795-3	13.9926408338473	-2.98999237992819	1.02726661673689	-2.91062936458102	0.00360701612627894	0.0507326895798156	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63594917437787	0.382164212378408
Merged-chr4-101331319-4	6.40582628406944	0	1.33146917565192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-31895004-1	1.40525957643997	0	1.55053018653352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84312986-2	1.9548161591216	0	1.74832434274657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92039030-1	2.82883618078717	0	1.35733228173499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64956666-1	6.70611637325381	0.675953593218326	0.782729770669309	0.863584877626822	0.387815974399565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33184178463999	2.73339959716085
Merged-chr14-72594051-2	6.03544954801683	-0.342131464218305	0.796037751573037	-0.42979301363814	0.667346215400405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24621059920876	1.71756895783173
Merged-chr15-84994221-3	8.72935892088962	0	1.31710399418367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43876345-1	2.04840472875998	0	1.46486226077402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112233602-1	2.04588433332081	0	1.47549651700453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9134793-2	2.94502110115289	0	1.45143844063757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79333528-2	3.18036574009299	0	1.35258529469722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20811393-2	3.22826923353993	0	1.37020051800299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61563476-2	2.65260655975414	0	1.38592254424475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23440014-3	4.15102982411592	0	1.37006923949463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117311273-2	2.70606172776836	0	1.44575188380773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26688884-2	5.45833162926301	-2.18200503935677	1.01552531036812	-2.14864663350026	0.0316624220490666	0.266797244515578	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54328050617244	0.851599296279844
Merged-chr13-97466304-1	1.95520642560303	-2.72488607108751	1.52576251632963	-1.78591756051426	0.0741126072339349	0.497027151671637	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66469319036252	0
Merged-chr1-152605702-1	2.44382693672543	0	1.41026238991853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32013242-2	3.48604260113098	0	1.3634500022232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118507581-4	13.4519194187205	0	1.2866231328964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114908470-1	2.88386471575064	0	1.45949455573468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18643456-1	5.34345290230634	1.70459289123212	0.988393596951769	1.72460940306486	0.0845978877196796	0.54701499811302	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79165838691278	3.69963810050348
Merged-chr14-27172342-2	3.15287273638231	0	1.33142628221313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38478540-1	2.99225037546006	0	1.3503356183152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16206969-1	1.48765480726706	0	1.79813138957709	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34958538-3	7.05087840431546	0	1.29150526216455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29979438-1	3.34429933052402	0	1.34671728178597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67146464-1	1.70724579449469	0	1.51937620728044	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74911080-3	10.2504188463675	0	1.31291292397618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70791584-3	13.5891143462063	1.07807837152171	0.675497518471833	1.59597680530438	0.110493971981235	0.6687501167109	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61626214521913	2.51109349299861
Merged-chr13-41821129-1	1.50562098114397	0	1.94790499715863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99485652-1	5.00629655089816	0	1.31117403028678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34783784-8	26.4099978923531	0.662794430447933	0.342287297579832	1.93636876137172	0.0528225526315314	0.385770674132911	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07167846587406	4.64406025920902
Merged-chr2-101922460-3	10.9684945710706	0.847187570418851	0.56480055658511	1.49997651479153	0.133620486140339	0.7645302401087	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2695055778498	4.75007171903997
Merged-chr7-70099215-4	7.88214053650276	0	1.29592309081922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145370521-3	5.32511169761804	0	1.32323233753274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115051397-3	4.77987523268111	0	1.33653985255684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118633258-5	13.3854915082089	-0.204689548796656	0.406477652262303	-0.503569009655095	0.614564274620006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82317433022919	3.60029881927397
Merged-chrX-101770487-4	7.09365702357909	0	1.31099853234104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124924439-2	8.58298786762445	-0.452001600200172	0.494402404347591	-0.914238272762102	0.360591657547921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02583502457064	3.61644612296223
Merged-chr13-37291201-9	22.2543759142487	-0.663713678191838	0.459653542044725	-1.44394335620557	0.148754909480612	0.824473139518242	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50916290297727	2.94054798115874
Merged-chr1-58720968-4	5.7263798755237	0	1.29020934977275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109860314-4	21.396311842975	-1.20368732080489	0.459521889785447	-2.61943412829997	0.00880757809532384	0.100531004055377	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53140278192641	3.40867860977073
Merged-chr6-120540082-2	4.76839229495544	0	1.32263117370733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3150964-2	9.68466788070426	0	1.34182629942255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-23028778-2	4.03187802599616	0	1.32789193818299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4948167-2	5.3045048039009	0.563837469170874	0.90203159026977	0.625075080798719	0.531921782078353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37661892422878	2.15292080626044
Merged-chr11-101287504-2	3.86050293091018	0	1.35059656915364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88564232-2	4.75710177350631	0	1.3416352436959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80969652-4	9.21687900258938	0	1.29815947747276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64327183-4	6.00707671995264	0	1.30161069083801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137131645-3	12.7185331412078	1.18473560598768	0.478281869917531	2.4770656813564	0.0132467521985027	0.136897369672628	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65989617501792	4.91356987271159
Merged-chr3-61309383-4	5.91436519728948	0	1.30688290435527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21995680-2	3.73675183271372	0	1.3104978431092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129830091-12	49.5212851614108	0.2022624970609	0.229866835318439	0.879911609609546	0.37890719496014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43806952283366	5.60403212339475
Merged-chr5-123830038-8	36.2502935745186	-2.25202954656855	0.352457629119285	-6.38950432764324	1.66424328153445e-10	5.35722371798769e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.173902609997	3.47220392898627
Merged-chr13-37331187-6	19.5713966473858	0.808657591518593	0.480725539560965	1.68216066127279	0.0925376900531597	0.584586996733737	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67496501769248	3.44859223936632
Merged-chr7-101540905-3	6.77157703187165	0	1.29917771031069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103337120-4	7.81000197223147	0	1.29457962521244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20841621-1	3.43690601468248	0	1.32740249633683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4112391-4	5.31691198288643	0	1.31077703161512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170950803-2	4.67533750513193	0	1.3171676979584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32285321-4	6.32829114174586	0	1.30019727199248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75929749-4	9.38631978231302	0	1.29016943804366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90062078-8	28.704434561619	0.0441329460312912	0.334809792863785	0.131814979645014	0.895130637897783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76216638921903	5.85280821124723
Merged-chr17-3160870-4	7.90973494335219	0	1.29093817882304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4391989-4	5.79354482209215	0	1.29475062805297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35903244-8	25.1838682790668	0.591182954416049	0.397825880920624	1.48603442553302	0.137270015453231	0.778785069439733	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29032404478238	3.22973063544683
Merged-chr5-74641257-3	6.06216871855761	0	1.31888296174956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94774154-1	3.01102550330161	0	1.3858910613084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89445355-3	8.84937846772094	0	1.29120210408295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-42980296-3	13.9770074782521	0	1.29039754891593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60605649-1	3.06847143883475	0	1.40595435502212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152556780-4	9.69097895203267	0	1.30129855760048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117042690-2	3.53693263118377	0	1.37347408358281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50438225-4	12.6121278451827	-0.524462006085014	0.544985553788934	-0.962341116087879	0.335878281835805	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35050718608526	3.25781591673761
Merged-chr5-3421059-4	6.51089955936228	0	1.29806746397793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97029427-7	24.704085118132	-0.582919578942522	0.481918349518074	-1.20958162212634	0.226439473612949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52083623465066	2.42580743154785
Merged-chr4-55366209-2	4.53946034407564	0	1.34128907306026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67406597-9	40.4026214467635	0.234851105701526	0.393470275970806	0.596871276037509	0.550593326062771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75818656616397	5.10655405987261
Merged-chr9-121572057-4	8.3170264843667	0	1.29762723583373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4280036-4	7.1937873396509	0	1.30088411883295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101847420-3	7.18824806439598	0	1.30124631470382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86163110-4	5.3167250011303	0	1.33119439381481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29168170-4	7.69911592899279	0	1.30030700300855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67048863-6	21.2936180760675	-1.67198586506516	0.41977998484584	-3.98300520611809	6.80492642863377e-05	0.00234409447762521	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70828795644094	3.96698996187398
Merged-chr2-75997890-2	5.80680311142842	-0.495772713001942	1.11182927927372	-0.44590722896396	0.655664260211746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10825272138448	0.563523181795778
Merged-chr6-116050786-1	2.00950861634649	0	1.37513564655955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36203220-3	6.19044458681997	0	1.33856955469752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77002672-1	1.84995071168162	0	1.47637383619795	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47003882-2	3.32539705363647	0	1.36387954998273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-57293678-1	1.23517590938083	0	1.57971454902925	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159843482-2	6.04874591398388	1.97246341928898	0.776398297429435	2.54053032550377	0.0110684494521291	0.120006453940406	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01693474075419	3.19723607598891
Merged-chr12-79014445-1	2.49277184185053	-4.53659376537034	1.27245940797227	-3.56521688389231	0.000363555424195532	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19679499886974	0
Merged-chr2-129903554-7	24.3618713080604	-0.430820618600204	0.310614082114973	-1.38699641583132	0.165442855753608	0.887823671846533	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98752435335862	4.60499271250299
Merged-chr9-41084438-8	24.3785122281385	-1.14071539392904	0.503002190589814	-2.26781396834763	0.0233405476760757	0.211511777623193	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77812311083677	1.87310358659911
Merged-chr3-126611784-4	19.1494608751218	-0.0614391845499116	0.408175516009883	-0.150521484361703	0.880353201765133	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88548075221352	4.74466494816012
Merged-chr14-61687881-3	6.23093133638937	0	1.30065400553804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118831642-4	8.42746669870306	-0.237679950408699	0.593237966674544	-0.400648582458467	0.688678871668013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98746411391946	2.99467874641811
Merged-chr18-82942944-3	7.05838196526768	0	1.33108294062898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62071513-2	4.84162695759395	0	1.30498776114639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84285902-5	15.4739834566456	0.0802817995986256	0.417287529693111	0.192389644755662	0.847437003179328	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45253484303399	4.25689813119638
Merged-chr7-80011674-3	7.36369607642696	0	1.2991449866459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126695425-7	25.7991805175901	-2.71019059013804	0.718342821457475	-3.77283729882512	0.000161401546680073	0.00462585327603336	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67996492377221	0.666688015277142
Merged-chr7-68070782-4	8.0510751566834	0	1.30214032478328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166030394-5	14.5292020599535	1.19114586995649	0.50729579080195	2.34803026469721	0.0188729877277427	0.179124801170236	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4613003926683	3.62853785122238
Merged-chr1-156989692-3	11.7656506903772	-1.23225181148324	0.49151174054595	-2.5070648569137	0.0121738371849503	0.128806924334159	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22666295375046	4.13076215265091
Merged-chr13-47038217-4	12.0319854269201	0.947544929086643	0.679401314387281	1.39467632608452	0.16311346699068	0.879222355355358	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7319143270931	2.13155283990696
Merged-chr5-136949703-8	30.0448363172571	0.127672491795312	0.381261734460506	0.33486836012004	0.737724390451353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25472557738277	4.36782937975864
Merged-chr17-88195484-4	7.46167569158125	-2.15359399406972	0.754518261946918	-2.85426357807788	0.0043136725545632	0.0580958876237607	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47046242863709	1.15307255889252
Merged-chr3-79529900-2	7.29572193338214	0	1.32606364125533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84176853-2	5.47483564134843	0	1.31663935677892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41402226-2	5.4248550589561	0	1.32040186730369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35755966-3	5.54282746775436	0	1.32554562629094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83430875-1	2.19733989854896	0	1.40726920384537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84598142-4	10.2797038513734	0.526430660893754	0.661090698737103	0.796306258580565	0.42585404875863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43714491638244	2.49065419848114
Merged-chr2-167055363-3	3.98151957830033	0	1.3229165550831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74793706-3	7.41552593394928	-0.0461615149704486	0.441439625830726	-0.104570392573116	0.916716709171559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86068972879106	3.8715329423212
Merged-chr3-105000830-4	8.76082966554398	0	1.2933808286769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81014113-3	5.2138622291891	0	1.37695084530151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91062588-3	8.37975636414463	0	1.31710898682466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142537290-3	5.23432784635553	0	1.3372623500105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93199907-5	16.4030456805465	-0.939279892656479	0.458336169787138	-2.04932526510553	0.0404303197199042	0.318653922616917	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87947126305314	3.3758985115937
Merged-chr18-46409186-5	13.8980468551095	-0.665628176908114	0.476572110993225	-1.39669981006836	0.162503861344399	0.877094021922121	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81824367152573	2.33327484261638
Merged-chr19-41764930-3	10.7383533820996	2.50564724145985	0.99360115919753	2.52178373411269	0.011676146866247	0.124755344114171	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	2.12139497612295
Merged-chr11-85131770-3	6.25677051353573	0	1.2972713764747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44996499-2	3.03953239731298	0	1.34362743300652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22297494-1	3.25139410494594	0	1.35539341962921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140819630-4	11.1389930182744	0	1.28564917029619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47280321-4	10.4687628208937	0	1.30040624883401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25532250-3	4.19706893077294	0	1.32735223415296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75893110-5	18.7587705818925	0.191250428477134	0.511963686269773	0.37356248813389	0.70872984671395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67919789015238	3.37095162735664
Merged-chr6-54955804-7	13.4052522832926	0.300083274931101	0.447966886341738	0.669878252345147	0.502935404354163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66868826052743	3.90298059424436
Merged-chr10-19939471-6	32.6842447904606	1.53643636523712	0.396102423037177	3.87888656034026	0.000104935672384062	0.00328878966312177	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38621015479913	4.06127965835185
Merged-chr8-26907733-4	8.86569601906861	0	1.29435334469437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153492062-4	9.99513302769804	0	1.30802191076748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82903705-1	5.88948585465603	-0.745527512457668	1.10090394875715	-0.677195783791419	0.498281742486867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36196353701645	0.683637474991079
Merged-chr3-95694631-5	18.2351372827834	1.13542019447241	0.477565507978134	2.377517168858	0.0174296315559771	0.168336667641539	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4475813845134	3.38500065095992
Merged-chr9-41162601-8	24.211212116277	0.421270722192844	0.358435237031211	1.17530498865591	0.239872719397729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32649331653952	4.59883713473356
Merged-chr5-66141698-4	15.1715916546303	-2.56456380049347	0.50654404091858	-5.06286441716464	4.13003583283782e-07	4.01538376598634e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45996478630517	2.39514087231059
Merged-chr2-181537845-2	7.02911541994425	0	1.30373915961641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17727935-3	14.8683440694706	2.43419514595669	1.16273582795412	2.09350661382797	0.0363039542877129	0.294405335925154	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr12-95695518-4	9.3402857813941	0	1.29354388944486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82843892-7	25.1557070704435	1.11993135595645	0.413324562922355	2.70956883868243	0.0067370723141205	0.0818443441975309	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68928153201004	5.92047486001622
Merged-chr11-8673997-3	10.7109542179464	-2.51039473085286	0.872738333779448	-2.87645750586139	0.00402166341231096	0.0552154424823689	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17569672250701	0.73596151290311
Merged-chr11-119057103-3	5.25277587976238	0	1.33491702103161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100060648-4	10.5136434482293	0	1.30873636379993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31022461-4	4.72930445747726	0	1.31914337623707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94344746-5	16.9974162745445	-0.276784138521	0.548398974473639	-0.504713085553563	0.613760368880173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66007343534245	2.02641055696592
Merged-chr7-46839230-6	20.5643595225551	0	1.27967979589456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67469290-2	8.74558312516777	-0.989231199333824	0.511472847142014	-1.93408350973352	0.0531028610720642	0.387067435539889	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86583234548198	3.69990226423732
Merged-chr4-93551244-8	24.1987846642701	-0.585428603321514	0.45502017898324	-1.2865992111156	0.198234018819194	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78981403594975	4.27586448731133
Merged-chr16-33777420-4	14.5522447612832	0	1.32164120671007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11707011-1	2.91230855541189	0	1.37285697188882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29478852-3	7.31853744260433	0	1.32338397322413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41408035-1	2.14409987344245	0	1.39369461399582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167760944-1	3.04047501071459	0	1.33057713820315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19506161-3	4.9318170838588	0	1.33236524392801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131073281-2	5.16485564798442	-1.83127032874159	0.987271777652134	-1.85487964934702	0.0636134146785558	0.443043098908565	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26356998652415	0.918668513615376
Merged-chr1-140466215-1	2.06395362792084	0	1.42703004220643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4548829-3	5.07817329611228	0	1.33407662405181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65458018-1	1.93245461691891	0	1.40093096982733	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53880943-1	2.11431303680885	2.75214221097196	1.25415165305138	2.19442537453579	0.0282048433757747	0.244180404773897	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.93871841517079
Merged-chr18-26868887-1	3.08313335144	0	1.35070336882349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4478755-1	2.60990585604517	0	1.36414258710007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121682645-2	4.3782483844333	0	1.35578701999493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32939918-1	2.10527216456504	0	1.38112420966989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20151500-3	4.65424812648236	0	1.32048756559977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57211864-1	4.0556196005808	0	1.34874244717432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128674666-1	2.19418209964939	-1.18999520413371	1.08362110341287	-1.09816540152809	0.272132271088629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50779355342625	1.41959898789419
Merged-chr3-79234253-3	9.91962423370832	0	1.31657897731123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110685385-1	2.5873295697213	0	1.41111282006173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66818880-2	3.65016183670139	0	1.4114849304857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101658375-1	2.16508925436938	0	1.38250985723336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74454822-3	8.43680414015798	0	1.29347656941959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19365814-4	12.5799834038173	-0.570072946149594	0.497010277352293	-1.14700434201587	0.251379826397009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73559432958128	3.11561005221855
Merged-chr10-5057111-1	1.86908077525866	0	1.53170488177182	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79430444-3	7.82307623047346	0	1.29290278065796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130783929-1	2.21916380896282	3.26221343393202	1.15222322224007	2.83123388850804	0.00463688003010658	0.0614109368559677	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	2.00626573557989
Merged-chr12-73445785-3	3.78857333964371	1.29377492930598	1.3550506667317	0.954779744455229	0.33968909277486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr1-172612987-1	3.82648099365507	-0.515613162736875	0.787674147986897	-0.654602114408169	0.512723962398188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47089607963399	1.40264952818025
Merged-chr16-93288260-1	2.69235414627087	0	1.33179124364932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98605803-1	2.18515038806526	0	1.37238089184063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76630258-1	2.53534565238486	0	1.34869823168017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43251450-1	5.45457085684101	-0.194103595897187	0.866389172588592	-0.224037421101704	0.822728185388884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46935641959368	1.65199033198162
Merged-chr2-148073976-4	11.042509172484	0.0469627456359796	0.726893177453173	0.0646074926724774	0.948486518886468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80712703439978	1.82361065065357
Merged-chr5-21658807-4	5.4626514363029	0	1.31188292395626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119118897-4	10.7866016757991	0	1.31102659914342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73047185-4	5.60208892031076	0	1.29718985561891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-5692457-3	5.41004557397502	0	1.30361693560869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102055694-4	5.71795912975567	0	1.31773483964249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117209819-3	6.00357746634958	0	1.32310753526236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136799089-4	6.26002387478702	0	1.31667380324813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95163394-3	11.5562050006452	0	1.30534716881286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19217823-4	11.8276646797497	0	1.28845165820883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-39432114-2	10.1035893883576	-1.27560837457989	0.555027315516819	-2.29828035290857	0.0215458379327194	0.198580299795696	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88862574324927	2.35391506586093
Merged-chr18-88932274-2	3.69319109574236	0	1.45465574167035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70842918-2	4.60276887444963	0	1.31740913710492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91908403-3	5.45833316327268	0	1.29956725328433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58543366-4	6.73379438496024	0	1.30261684543489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74213040-3	13.036188721389	-0.851688604341117	0.578634180731457	-1.47189473539999	0.141049305482782	0.793885264089396	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35413346796391	2.81099288043475
Merged-chr6-135940147-3	15.7575550808519	0.102848702372212	0.594667125202052	0.172951720405373	0.862689377160324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40126998216946	1.70656116796365
Merged-chr19-57355653-3	7.81395289608015	0	1.3009147288824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46149652-7	28.1467140832132	0.0580705793549523	0.428266233869655	0.135594578237579	0.892141791806205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89190538603546	3.87812204049344
Merged-chr3-100998255-6	10.4560931720644	0	1.28540917498773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31422595-4	5.56596588231276	0	1.29920952232197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-26764926-2	5.32442589611182	0	1.30171637874518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36633805-4	11.0695996325033	0	1.28500012937402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86717675-1	2.63861052856524	0	1.34197669447704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85343624-2	6.48325700740545	-1.8884974915845	0.771130818911567	-2.44899755692565	0.0143254419802066	0.144829848272892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28689727950756	1.46261730325446
Merged-chr6-137560443-3	5.29972523396695	0	1.31362570688415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34213015-4	17.1455497546787	-0.0241116265907721	0.358462893501872	-0.0672639400837905	0.946371583491877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16449822264962	5.10819091784351
Merged-chr2-90533240-4	13.9837195665408	-0.908094255606809	0.51002985448852	-1.78047274608559	0.0749986257211211	0.500998680708414	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77106652725837	2.85611198817566
Merged-chr7-92675908-4	13.8337080072745	0.243510853134827	0.540811812818389	0.450269109074732	0.652516410172303	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40772011182751	4.36096785367558
Merged-chr18-4234452-4	7.04951610884414	0	1.31852900828595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29786349-1	2.20162959640066	0	1.38708446493323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33906392-1	3.47303648783102	0	1.42111115210575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3301574-4	6.94203952298278	0	1.32029412870953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38342964-3	5.41897850558438	0	1.3392673215191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116984032-3	7.09057263337599	0	1.32620698137245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120887874-4	6.09524255385641	1.94907677202433	1.26161391942764	1.54490747288884	0.122368645641356	0.719674333370536	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr7-106236859-3	7.2924822047268	0	1.31756215078239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73756905-3	8.88069847747028	0	1.31088090858035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30214960-3	6.9977193985871	0	1.33971741095268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94739970-2	2.6489834430182	0	1.43629968880039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13978846-3	5.88175628122804	0	1.2977234261844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11350254-3	5.59142992820654	0	1.30523385214144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111821905-3	5.27928793838054	0	1.31841528219874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69197861-4	7.62398374338819	0	1.31492034087028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115166970-4	8.27190125104061	-3.10124190330667	0.850746434860745	-3.64531871804352	0.000267060616508157	0.00681160930770571	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68496450682177	0.73596151290311
Merged-chr13-55474688-3	7.08642569142924	0	1.3055485023807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60588837-3	10.6970117640377	-1.2592729566083	0.814142499977489	-1.54674759841566	0.121924120538471	0.717835262699965	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19932365934505	1.0023426291647
Merged-chr13-110600546-4	15.6544900198121	-1.85128132468174	0.450681797844902	-4.10773484426111	3.99558429585633e-05	0.00153135162109694	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98667859078992	2.52497320336197
Merged-chr1-54585443-7	27.533369807806	-0.174608859809552	0.398111167445127	-0.438593222415994	0.660956308856231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92842359556081	3.67897398747539
Merged-chr4-123432105-3	5.41713217581881	0	1.30288319250292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28433245-6	14.2553695586195	0.115868284972392	0.371243866173561	0.312108281186314	0.754958233203606	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00522384594883	4.13026207686517
Merged-chr2-38658638-3	4.52895790600964	0	1.34084212572769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136331378-7	38.8317563086617	-0.132542154034196	0.369161669508502	-0.359035525575179	0.719568513112427	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98323323277728	3.73730543867919
Merged-chr7-134689230-7	26.1260337627922	-1.58394931750485	0.376644149180989	-4.20542658355146	2.60590172095481e-05	0.00108574903845494	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63171346927637	4.1143696678263
Merged-chr5-62711194-4	7.68267125887303	0	1.32102191326457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19122389-7	21.8169057799241	-0.465567817802986	0.441547909255158	-1.05439932574553	0.291700130840933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64181901560467	3.07906840187467
Merged-chr13-56539728-1	2.42384801548567	-4.24788280312192	1.47156807713648	-2.88663696170133	0.00389383232219177	0.0539881958255768	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65678019273138	0
Merged-chr16-78205022-2	3.34878796691983	0	1.3870236350337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43894312-4	6.56454698028084	0	1.30521369479594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107363823-2	3.29072254667574	0	1.42036174939402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43050786-2	4.91207302116105	-2.66801869964422	1.09447516142497	-2.4377151658431	0.0147804150958635	0.148081583522163	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62818794880806	0.563523181795778
Merged-chr9-15880356-1	3.07145673466112	0	1.37620143787095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32521865-2	3.04950460925672	0	1.348502542596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26638281-2	7.93045500802809	-2.12297224750387	0.804938718528013	-2.63743338298614	0.00835360314054429	0.0963421374553489	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81895366511537	1.32643090402693
Merged-chr14-19747911-2	3.91373058371163	-0.886208355072064	1.2559379403919	-0.705614765324738	0.480427739474284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0
Merged-chr18-39856726-2	8.64855204954206	-1.97462244311231	0.631604271136985	-3.12636018049353	0.00176984641644981	0.0295119683907228	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11388499207556	3.21371271926773
Merged-chr17-71196866-1	2.71029668465918	0	1.39310895541402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68478785-2	3.98831239937407	0	1.32751438166365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41503728-2	2.48272635093857	0	1.38883550814082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101741217-5	15.2965253282848	-0.530535356011044	0.499242696687681	-1.06268025457554	0.287926978232636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20724630038466	3.43252686037061
Merged-chr18-3005639-7	31.5029763088745	0	1.35912204126573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34233925-3	4.01300482730502	0	1.31673959930152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43842820-5	12.0326078624818	-1.06232726757263	0.699720431318907	-1.5182167334606	0.128959770453122	0.74595070904043	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50321863167513	1.31495854024319
Merged-chr1-181246808-3	8.87935457829763	0	1.28949381803276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12037434-2	5.72386382017694	0	1.31789593435341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45107658-2	9.34865038582693	-0.54109364739348	0.459690047304634	-1.17708366880282	0.23916211275885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75524028865964	4.23650923244526
Merged-chr2-145888902-3	22.1852821058778	2.9500099971752	0.424904511720927	6.94275988086645	3.84512690481353e-12	2.11145935060458e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60816520268011	5.32468424571789
Merged-chr2-145863289-8	35.4288765021737	-0.967245904829039	0.345787750365593	-2.79722431985053	0.00515437332565293	0.0667362154424642	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.07069031181909	4.9409770131161
Merged-chr7-36730808-4	14.119758924024	-0.685725215124414	0.395006400940181	-1.73598507136156	0.0825664742357708	0.537175311171911	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7968372154646	3.79276016663296
Merged-chr4-42965182-4	13.2456141495741	-1.29341639188946	0.536676420582485	-2.41004885306054	0.0159503845601567	0.156995606185871	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16219532563893	2.76616155187212
Merged-chr9-46028188-4	11.0300970851055	0	1.31120666059148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51964466-4	6.01166139416677	0	1.29522349851016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35632665-6	24.4955424140931	-1.46359988648436	0.409517953877308	-3.57395780240408	0.000351625621671373	0.00842277414726449	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01822607884792	3.62495648606044
Merged-chr17-17871204-6	20.8514036687626	-0.422431884448552	0.613370227596298	-0.688706209468295	0.491008167795454	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22420791872398	2.3640534479995
Merged-chr9-105648505-4	8.8467836283349	0.0173157629752607	0.503190023744344	0.0344119759100358	0.972548633733405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17357579907547	4.18200306088207
Merged-chr2-45081618-4	6.2321268485742	0	1.29688159677758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44658417-8	36.3350679739495	1.1959741936876	0.430612474033849	2.77737935105333	0.00547991801599862	0.0699395942721574	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61522272184878	4.51642173242484
Merged-chr3-79854644-4	5.31214797151294	0	1.30124334335675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41138686-6	17.6684792827793	-1.97634881936104	0.658542205939592	-3.00109666705603	0.00269009151364898	0.0408412050481006	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86428398045167	1.72774128397143
Merged-chr17-35725741-8	28.3737560179062	0.0824091924231445	0.325920301982408	0.252850748854524	0.800383549640494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29409677636322	5.29900524264058
Merged-chr2-73038628-4	10.5493667467308	0	1.29859768138995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50696080-7	28.196059975142	1.37423720472435	0.344354158937796	3.99076697363948	6.58599660532377e-05	0.00227949435472186	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5534364641871	4.91914125014022
Merged-chr3-127923420-6	25.6152068579121	-1.26932285514378	0.385081635623789	-3.29624354349598	0.000979870310582162	0.0187662969857274	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44198110560305	3.80713977578518
Merged-chr18-73808698-8	22.2803969984374	0.668354886418949	0.333849734509788	2.00196321078504	0.045288688376055	0.345083329130328	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98213400981092	4.80947508813364
Merged-chr13-58288042-4	6.72183790585735	0	1.29561960235076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94958142-1	2.41262498740453	0	1.38412567808825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103102832-1	7.52171411229319	-3.73700609555395	1.07633205930212	-3.47198251994554	0.000516629975015022	0.0112607412766283	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63423698695491	0
Merged-chr10-94480682-1	3.15856692144654	0	1.36258987682011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47759823-3	6.20098001535459	0	1.29985295759756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118175689-1	2.36200151901739	0	1.38911219517165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95459310-1	3.22508372756348	0	1.3467263236266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-40776529-1	4.61555437085494	3.93297416043178	0.983554207296107	3.99873655285755	6.36815143819718e-05	0.00221701238082277	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	3.26657828344339
Merged-chr11-44543740-3	3.82426002305061	0	1.37603035266255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35120330-4	6.74533268899757	0	1.32302535871813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78060269-3	5.3188163186816	0	1.30478877668078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55652053-4	8.77088388622933	0	1.29752636552084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-16457285-1	3.69260544301214	0	1.4162709928523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57695897-3	4.92359182810885	0	1.32108912391005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59141969-6	18.3983282069407	0.427521438439287	0.453278760806091	0.94317553657048	0.345591124131108	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68096133463573	3.54797863229524
Merged-chr16-5306793-4	6.30835377536539	0	1.29929156645235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167145926-2	6.67876034728423	0	1.29361600721392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34826103-3	6.30514043556272	0	1.3134937484948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92675528-2	7.92400061405852	0	1.31355530663412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32586131-1	3.90296881013648	0	1.32383621369276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151457291-3	6.71938302065139	0	1.29512206321008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79527535-3	5.79182793827528	0	1.30820277893486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69399502-8	30.7966265017743	1.36916877633003	0.292403027345984	4.68247127520319	2.83436915942356e-06	0.000184660704976762	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2548714269228	5.76820779722421
Merged-chr10-118041275-2	8.64279433159048	-1.28348500471141	0.671120852697946	-1.91244989565102	0.0558185133770356	0.40215177234132	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64733485811299	2.83318424860471
Merged-chr12-71007053-4	6.5212660591662	0	1.3077629182692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106151998-3	4.51260309750479	0	1.34090464886437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40437330-3	6.0326836566743	0	1.30442313427432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139742831-3	5.29667879991476	0	1.31711762240787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110667376-2	4.44373112811065	0	1.32074620995725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169779234-2	7.33126061602601	-1.35583125167652	1.12532770722162	-1.20483237280632	0.228268019909086	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0853949393914	0.306240821987646
Merged-chr17-8225386-7	16.971872912984	2.4765604963756	0.503241574440138	4.92121601664331	8.60081343545376e-07	7.17805853540683e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98924988713183	4.39882954666834
Merged-chr11-119446248-4	26.7520750597771	-0.806487039468338	0.407202498166226	-1.98055523504946	0.0476411732690465	0.358246272547654	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65693853556266	4.72089747953256
Merged-chr3-16210760-4	6.83188988144561	0	1.30013353494311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22517752-3	6.31709747972169	0	1.29750407127172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5012448-3	6.49917191719179	0	1.31489191117292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66216109-3	4.58307519160648	0	1.34602392848682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-15140446-7	22.0218535999908	0.698711662581298	0.346157980621039	2.0184762498549	0.0435416852323015	0.336161975802218	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24537622447754	4.61939019336257
Merged-chr17-5806236-4	7.98719496137497	0	1.3604761092974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89577209-4	6.47795094511528	0	1.29287630417038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67550026-5	13.298640993341	-1.04579364122909	0.686050537518379	-1.52436822659158	0.127416752586219	0.739988601951157	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74347595153168	1.40000983364339
Merged-chr2-163766441-7	31.3291118962306	-0.382072641964469	0.286760470794857	-1.33237555687303	0.182736810069704	0.954681350238243	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20020638701459	5.79857054461746
Merged-chr11-3178001-3	11.348311976398	0	1.32829612581533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90310541-7	18.7842297928076	0.242841757405897	0.417244498137857	0.58201308462949	0.560557867406815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86460278422297	3.98663543121387
Merged-chr12-44933121-4	12.8432244608056	2.1827148957721	0.511174371883155	4.27000064132916	1.95472405380435e-05	0.000863063500134454	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70279735092936	3.95035314137564
Merged-chr3-127487484-2	6.37491033939523	0	1.35092419084592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109333334-1	1.56966857575723	0	1.46025575060757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131111702-2	3.09933180136894	0	1.36451723698088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53428941-1	1.66620594924745	0	1.41727978358653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118816310-1	5.38501737384787	0.460111190407131	1.08332475496327	0.424721385068629	0.671039792517708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6282780842716	1.0991499147123
Merged-chr18-32693438-2	2.63308069794847	0	1.3894747882961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20380734-1	2.0972071912775	0	1.48316143637413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32545779-1	2.57117429002448	0	1.35626551412834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113624510-1	3.37005897245193	0	1.33214320691857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59229271-1	2.30100778561278	0	1.4366528071264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93108532-1	4.6335736553093	1.44334946536184	1.43143131124484	1.00832603983396	0.31329796600929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17348089936755	2.88790982993553
Merged-chr6-72836104-3	16.5204032805898	-3.3008215296423	0.542529008485257	-6.08413831890428	1.17119464133598e-09	2.89897291790684e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.97830920625552	1.77743761853437
Merged-chr13-97203288-1	2.01448128408191	0	1.42594254547195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36841906-3	7.00844128968644	0	1.30293999412173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97520192-3	11.1935621117259	0	1.31459461464868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36815300-1	3.19454373589769	0	1.37033782194853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93013631-1	3.16757397063795	0	1.35499547716396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23162234-1	1.29845820638892	0	2.43324981244067	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30616950-4	5.77141454343143	0	1.33129429310957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49896728-2	3.13592702750609	0	1.36788997716223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113657195-1	1.9399107380701	0	1.49608388830727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120831273-4	6.70727506146311	0	1.29200494818448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34047964-1	1.91951739219542	0	1.40431528991319	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30267666-1	4.30233886780126	2.39055631632262	1.22474716690477	1.95187740043043	0.0509527620177272	0.376051410301604	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chrX-98964720-2	5.54575819877276	0	1.29555954359929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44371860-1	5.64755203114477	-0.859339906300135	0.592734971179466	-1.44978776027026	0.147117713738351	0.817270604603101	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92212344469517	2.65251955765114
Merged-chr5-74954051-3	5.67922890428911	0	1.33576278578929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144592122-1	1.84381369492852	0	1.52772224538796	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60818311-1	3.11868101701553	0	1.35883872468889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53993529-2	4.7321865243453	0	1.34392060456679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132019760-1	4.42187560300657	0	1.31162730569486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169087468-1	2.24734638588486	0	1.434674060795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97672604-1	1.73203676046978	0	1.44789217172149	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14475837-3	7.45005904315977	-0.948790087690797	0.805477028776124	-1.17792321046378	0.238827220928657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12219106887705	2.30944904015933
Merged-chr11-73224157-1	2.84877029376764	0	1.36160890152294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143523086-2	3.22622628491283	0	1.38048127644681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34176361-1	3.43754674959061	0	1.36318565892889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75656708-8	38.6863049037095	-0.014023217856672	0.339980803259401	-0.0412470872538425	0.967098915390799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78137804529946	4.75819300733485
Merged-chr7-88285513-2	4.67903223305084	0	1.33977877145698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90736807-2	5.71310211508277	0	1.29630623488416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40647968-7	20.8972739786922	0.596033262877285	0.410910126666089	1.4505197711071	0.14691362987215	0.816553377360337	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08891374246175	4.69755084192145
Merged-chr6-13875180-3	6.75775947990799	0	1.30557911773605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22780393-3	5.95328588380138	0	1.30456463743217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25412375-4	8.35177922041079	0	1.30613261367499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4935325-4	9.22344896610767	0	1.30971184215021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51863834-2	6.6743261420475	-1.41666462548377	0.680615158720815	-2.08144736027673	0.0373929775457425	0.300837994788305	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44579822493736	1.98733255708278
Merged-chr2-160212535-4	10.3965814985215	0	1.30868963618411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78198920-3	7.81526884398022	0	1.30132460640114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46273801-8	29.9501986075763	0.161830608108436	0.323013483337915	0.501002640620856	0.616369264508593	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62481644489155	4.74502254286613
Merged-chr9-74905060-3	7.03362705843008	-0.847290616616365	0.778837994655062	-1.08789070696483	0.276643359123647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07684604565724	1.19454903376793
Merged-chr12-70991939-3	9.81433908354358	0	1.29370078009523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97830764-5	18.8275678401598	-0.498973796294133	0.503615974378451	-0.990782305724025	0.32179189115337	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46886509788728	2.50499287032223
Merged-chr19-34420930-19	76.1072773106979	-2.07225020937092	0.277404277667146	-7.47014511383053	8.01064311550581e-14	8.30894420675941e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.07947253739254	5.02187157193905
Merged-chr4-6376129-4	6.5838813076329	0	1.33091777559663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55318702-6	11.8220410755755	0	1.28406452043196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105466941-4	5.19988503808708	0	1.30960323262372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68148545-1	4.75260000869804	0	1.30420003363758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12008270-4	13.4437062068208	0	1.28792880410278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112285694-4	13.284651867508	-1.01725795513207	0.537647556063048	-1.89205352774407	0.058483849272909	0.416305622504086	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70753368379102	2.91136621420107
Merged-chr6-129369903-4	7.28152077449596	0	1.2903500880421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111494453-2	3.59258668424978	0	1.32639792539629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91746609-4	6.58265130139964	0	1.309302685559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181345748-1	3.01284068490681	0	1.37398602080523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85575193-1	2.58480619249184	0	1.360709316296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118465257-1	3.01957821309812	0	1.3818155812096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90743919-4	11.9082963373697	0	1.31203306174808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19631471-3	6.54182865705745	0	1.29849032797776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79528135-4	6.9055904180769	0	1.3179573660249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89872376-4	9.47526688498814	0	1.29664003095055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147682556-1	3.59317768726529	0.257022856042364	0.912361894033561	0.281711520092168	0.778164720361518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76882570783379	1.47158896970822
Merged-chr2-113644701-3	10.2554738999048	-3.00279985808593	1.01790181149178	-2.94998969859891	0.00317784524915332	0.0463422172843501	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12625025952433	0.469435083901436
Merged-chr2-143838872-3	4.02973636087872	0	1.34372155347732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8477663-3	5.34861475699094	0	1.31392351459935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100159987-2	4.64501501771479	0	1.34861910532708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99289325-2	4.58249920299675	0	1.32097927583039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117792488-5	9.91747637731729	0	1.29558996742348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35211751-4	11.550042004138	0	1.28452262186655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34250883-3	6.55429562433835	0	1.30563484695052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-112320505-5	15.1453203533932	-0.647027814223077	0.369769887521406	-1.74981207518046	0.080150746359327	0.525698150315827	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27095570975367	4.59271186262351
Merged-chr4-59040777-7	23.5274561125517	0.260573018667736	0.395392235095278	0.659024117165442	0.509880281921886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37935661812465	5.61506256824729
Merged-chr3-89908548-4	6.44454493730895	0	1.3305053357346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105500049-4	6.08285432789229	0	1.30092340557066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100409338-4	13.0663523317889	-0.0227459747516901	0.396413840564209	-0.0573793657641119	0.954242999652123	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3861908209656	4.42390114017891
Merged-chr8-26884605-4	10.1294896607739	0	1.30502545160187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83622458-5	12.0481545170207	0.680853786328502	0.503091045497151	1.35334109486224	0.175946686376566	0.929196295233017	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61749867550565	3.75537872938039
Merged-chr7-29229306-3	5.7153299131144	0	1.30625894394976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45619122-3	6.34899442155875	0	1.30699720810746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-19857048-3	15.7651021287831	1.78695351926554	0.712574206566726	2.50774375889258	0.0121504743309916	0.12865647410552	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12203515284301	2.08307023099066
Merged-chr8-124830202-5	20.2796457878708	-0.384377470432653	0.388820800923849	-0.988572292221406	0.322872448198201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46535154963714	4.05222436434365
Merged-chr11-117881997-4	9.75644944353387	0	1.29721022907246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95955712-9	31.8412579401869	-0.341408039442815	0.377230212633279	-0.905038960319734	0.365444747372206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13381449132124	4.73740988830479
Merged-chr5-123137807-6	13.1974740075297	-0.428758892822224	0.520710565857054	-0.823411163390772	0.410274216907175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10430635643155	2.84812292246362
Merged-chr6-16857252-1	2.3410087898707	0	1.50119341449686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121803074-1	3.10303541858586	0	1.33402030024353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60181045-3	6.11707315835478	0	1.31068212276625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24715338-3	4.22992092534763	0	1.35040564091345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96227250-1	2.9665559243202	0	1.38486176132804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95320397-1	2.98307819941199	2.86175576418356	1.18067878457217	2.42382246685372	0.0153581114148895	0.152591021517009	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr15-25653056-2	2.78795470698276	0	1.44108841161768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123562645-2	2.53473357050806	0	1.42815055617256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53800755-3	6.26268968365847	0	1.36865385316977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95044309-1	2.87592722423298	0	1.36084301710724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83407629-2	3.47672151065676	0	1.39427151604899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68668276-2	4.03289584010612	0	1.32822068759616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171474372-3	9.69333334046731	-2.03248951382635	0.645955940814247	-3.1464831970805	0.00165246756142722	0.0279674035920805	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80017764743389	2.33881750023062
Merged-chr2-167960433-5	14.604680367325	0	1.28528848550922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10926261-3	11.5268644126703	1.44656551308316	0.623589060006169	2.31974164695713	0.0203548574442008	0.18982567640199	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12110726358829	3.24402839470236
Merged-chr6-54772235-3	6.56338341676145	0	1.32119242997619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15764316-3	5.1402720715708	0	1.31256110258178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9485452-9	37.1394369156515	-0.482666131839915	0.335315289147622	-1.43943967800234	0.150025989292706	0.829197183144816	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05827523946498	4.57482646985546
Merged-chr11-95869611-5	13.7341620882777	-3.39236348548119	1.03625043288447	-3.2736907776611	0.0010615270617244	0.0199100308195874	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52278084175711	0
Merged-chr1-106389869-4	8.13921574488946	0.0357358551378502	0.749561836654734	0.0476756598192591	0.961974732688884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69019777312752	1.99708834426639
Merged-chr12-52001774-4	5.05104712571997	0	1.31150269230327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84803872-4	6.77024036735809	0	1.2983285479205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16973600-2	9.41283513213201	0	1.29851279275859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149692676-2	3.89110222848148	1.38515669926239	0.976596258088519	1.41835143007157	0.156088188337406	0.852922727785416	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	1.77128661274154
Merged-chr2-160598030-3	4.67244059560659	0	1.3222660207618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12667922-3	9.33028820209611	-1.14705742309781	0.625303482764496	-1.83440114234869	0.0665944701774233	0.458071815601464	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83658126445721	2.47169394410276
Merged-chr7-118483230-6	16.1881788827922	-2.89896774086385	0.674955577416063	-4.2950496860282	1.74654215824863e-05	0.000794220903778114	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44826646970792	1.26501898168246
Merged-chr10-20046319-2	4.83238474713554	0	1.32072790326695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137436553-1	5.56747480656189	-0.0303861425907378	0.765043172266647	-0.0397182063604472	0.968317786552745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20094305648615	3.71594332969903
Merged-chr1-182923042-3	13.6182849021594	0	1.33063298801719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19759927-1	2.96998313150912	0	1.36828631825681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44951850-3	6.39749110488632	0	1.37440223887345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24422246-3	7.24014746887141	0	1.30174369855419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105821460-1	3.12675788125459	1.35012677969271	1.27344200466127	1.06021850602598	0.289045203869023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	1.10669213789164
Merged-chrX-13518240-3	6.90087813865701	0	1.28876721098375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88390605-3	5.25290091339908	0	1.30139099228374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26828542-4	8.00904786886809	0	1.30462083213723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30584215-4	27.1383599009936	-3.32706928379271	0.740740583639198	-4.49154448571873	7.07085274705465e-06	0.000384083078644251	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49340806676418	1.20724342340814
Merged-chr6-70881114-2	4.06722456752966	0	1.34801430806407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85492282-3	6.66788566090413	0	1.31018675952319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36090228-4	5.78982304369007	0	1.30214062787306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67229082-2	5.63047375439304	0	1.32216138655762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120140408-2	4.88017709491927	0.769863426420018	1.32710515113027	0.580107330428444	0.561842240714421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.306240821987646
Merged-chr2-165888983-2	4.84873115710372	2.38453129806462	1.22769322601076	1.94228594533576	0.0521024935138622	0.38190572531204	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr4-59465647-4	10.0980435652426	0	1.29197908548612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25561329-2	2.92525854298606	0	1.35008155669788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21146767-4	6.80270429752854	0	1.34454836620702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5597049-4	10.0216453789801	-1.16983068931471	0.612786229161013	-1.90903553905963	0.0562575072326692	0.404645356920859	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22294913772487	2.64695715578682
Merged-chr18-53951291-4	9.50515115507179	0	1.28528795527176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117348472-5	12.8123218808528	0.25145397331122	0.521350918561065	0.48231232430785	0.629584093612058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75671724717479	2.59016101190973
Merged-chr12-25438898-3	12.4649721806937	-3.34772579204291	0.672452796030739	-4.97838035889419	6.41185581039751e-07	5.66967699304785e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92687374213641	1.46928333126936
Merged-chr7-99107035-3	5.52694300765104	0	1.32435040167808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30934172-3	5.77761860184314	0	1.32526105999352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6251314-5	16.2207500985981	0	1.28570957804906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105033862-4	18.4258498895256	0.618348146753797	0.386633646121162	1.59931281966086	0.10975111245731	0.665595934536925	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64978411711098	5.25184471453043
Merged-chr1-53774138-7	27.0161061457679	2.15048019758289	0.393241834685704	5.46859466084438	4.53617784561009e-08	6.4158118856526e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65949628263328	4.7176602560249
Merged-chr2-133467944-3	7.16249433526078	0	1.31226215071811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89436110-2	4.32360788770785	0.738798076027309	0.966687217194923	0.7642576242718	0.444713732794391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00379370746889	1.42436654726916
Merged-chr3-9852469-2	5.97492729439512	0.562184236760818	1.06273023594343	0.528999945373476	0.596805487777744	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.803892645765084	0.666688015277142
Merged-chr3-130878973-4	6.95056108465766	0	1.32240575367398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17619207-7	23.6912972787248	1.37496000934454	0.373611639790743	3.68018515192579	0.000233064665874097	0.00614106599040674	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65975802387972	4.42415931434126
Merged-chr17-34309846-3	21.0660507738325	2.81773530566781	0.519725552954342	5.4215831599016	5.90735042216151e-08	7.94283375898284e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49692290749205	5.778048063411
Merged-chr2-14340575-4	10.7133096650925	0	1.28968253864513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30702402-4	10.9879019348433	0	1.29997851085195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45122685-4	14.0726199951048	-1.52478771036742	0.415699826208687	-3.66800179897585	0.000244453464572221	0.00637941537377651	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.23408102297876	3.81825311799543
Merged-chr5-142821851-4	10.2159834786235	0	1.2864797176822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43879547-3	6.53984645477741	0	1.30560769386638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8741011-8	24.6250134145704	0.344325547247421	0.382664391278919	0.899810787454342	0.368220952601995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81961590951097	3.92816595207815
Merged-chr19-6288183-4	5.23564374522802	0	1.35625770047234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51237716-8	27.6818121229052	0.398217823302566	0.343336540985044	1.15984690170194	0.246111144503904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45969652375581	4.7802805912507
Merged-chr10-84401313-4	5.75115373491727	0	1.31134027711851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31967755-7	17.8746763757255	-0.193884164363853	0.371711092966896	-0.521599080663218	0.601949503543627	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25212558221568	3.86816681944572
Merged-chr16-31883760-3	4.93446565871732	0	1.30379881684131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23865096-3	9.76573429470576	-0.605262253268606	0.661178796849874	-0.915429012775851	0.359966453174428	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3079781192086	2.32092586863413
Merged-chr8-90869453-8	22.9516170320656	-0.343430346343404	0.343897277299376	-0.99864223712488	0.317968031673889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70411888957897	4.53033611107643
Merged-chr15-25377660-1	2.73622847527376	0	1.36257142327971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109631343-4	5.33098590457992	0	1.3155604849209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16670471-3	5.82966285230145	0	1.32773476813702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15126882-2	3.49583366752226	0	1.46564331357083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142919405-3	3.4363010221173	0	1.32896952504888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84739524-1	1.40011007634361	0	1.49169294600775	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96629435-1	2.66173722009014	-0.208499448453937	1.19724418560767	-0.174149476740295	0.861747990415097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15907657994676	1.03300427768847
Merged-chr9-21225343-3	5.78736998972242	0	1.32740084067766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137345924-6	17.5682898108623	1.5866538895213	0.701622844332851	2.26140568588527	0.0237341469987638	0.213980624969815	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17715610092953	2.37850366884776
Merged-chr7-135509441-2	2.65410119400166	0	1.51765966765362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6733366-2	2.42395424204379	0	1.53199568947843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-73637868-1	2.60003812653857	1.94674026870385	1.31518177268585	1.48020624155111	0.138818215258185	0.78497880704927	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr16-3650860-1	1.49244348867771	0	1.61364920039075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140511227-2	6.11845638884832	0	1.30513419852964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34066824-1	4.5881376200476	2.65578495671402	1.15859021788366	2.2922556359618	0.0218908962011944	0.201079913292557	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.761571207890147	2.55708081680992
Merged-chr9-58226520-3	6.56568349690033	0	1.33539353245259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11046259-1	2.01755878341584	0	1.38292804780482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59954902-2	2.74937647723402	0	1.41307720422916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-67573223-1	2.23161561112506	0	1.35698709081969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94227478-4	6.95299306404341	0	1.30198418880478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56732170-1	1.45011323959057	0	1.48486589972597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55485909-4	7.38905325170907	0	1.31748983639564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15269022-3	9.70799488492284	0	1.28701443166351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25436876-4	5.60811149245768	0	1.30441726613997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117891716-7	31.2447530524179	0.0809225592385065	0.3460358122665	0.233856024058527	0.815096754309171	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13233366897619	4.09951874329829
Merged-chr7-3903883-2	4.90704243158157	0	1.30906198796255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76285663-2	4.44469226728794	0	1.31008503193003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92975506-2	4.16708572928028	0	1.31769005640287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54900086-3	4.97616461142406	0	1.31910228551662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65300885-3	5.2272984333606	0	1.32278574079455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4980389-3	6.25995558110669	0	1.30989012777057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3358132-4	6.0122755269745	0	1.29863832887039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121496723-8	59.2458522435986	1.13455987490946	0.359074504106289	3.15967817802408	0.00157943492551776	0.0269899985990804	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02689912048322	4.42056022890182
Merged-chr15-73147182-4	8.06060589883562	0	1.31324686193554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31826009-3	8.27293832781204	-1.74862025614171	0.584479297741081	-2.99175738627502	0.00277376604985352	0.0418022408426494	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70830371107568	2.60524550487833
Merged-chr1-51648141-3	13.7930131208935	-2.11494789167165	1.00916060916444	-2.09574954914538	0.0361044139012781	0.293456470509077	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38540530395208	0.563523181795778
Merged-chr9-83652947-2	3.68781149051858	0	1.34458343022342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133685970-4	10.2747711536858	0	1.30691972073929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63788269-3	10.2820715371753	0.420002796086395	0.569703375340019	0.737230661194034	0.460982090594521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33111840214892	3.00982473409987
Merged-chr12-85543027-3	5.79143565874079	0	1.33181521288411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30626230-4	9.45917904076072	0	1.30709691967237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34494601-4	5.63034203409107	0	1.3090788181445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116124311-3	4.6426654409305	0	1.3142028042056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5334162-5	14.7742459402872	1.17629556878473	0.465902095864412	2.52476985878822	0.0115774079184761	0.123961543149392	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83901513500513	4.10019589996674
Merged-chr10-63460545-2	4.80711509549115	0	1.3689108718614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117406713-3	5.06491254872378	0	1.34342156169418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34283857-3	10.6541881148536	0.120996709775755	0.761529260907463	0.158886488001224	0.873758306471322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63405227781616	1.32643090402693
Merged-chr11-65784558-4	8.14233116025379	0	1.30185295239523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73068198-4	9.3289064415498	3.41974769995315	1.05290987674911	3.24790162526703	0.0011625945873049	0.0213401421073108	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.54311005189624
Merged-chr9-35027903-2	5.19621365393382	0	1.3134660276659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50030109-4	9.84676899259097	0	1.30664343631573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128604705-4	6.90332313407132	0	1.29124813055195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83655162-1	4.20710526597316	0	1.33329629369477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67381725-5	14.2522905604644	-2.00869219775884	0.685233590346906	-2.93139773948022	0.00337440441316131	0.048451731659512	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74663028348176	1.40000983364339
Merged-chr6-134002471-2	17.3463075034698	-3.07003369234636	0.551653054263058	-5.56515307695985	2.61922381122845e-08	4.07513807544129e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.17138888755696	2.035269112763
Merged-chr11-97657430-4	11.8742670583322	-0.992694387925233	0.62714310179422	-1.58288337236779	0.113448049270902	0.681564422879135	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46168005178742	2.61076849167644
Merged-chr6-48601865-16	101.236010094182	-0.0818317214552656	0.227781614292761	-0.359255165125354	0.719404211514533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.03013526146402	5.92685418998816
Merged-chr2-155764855-6	14.7223539652885	-0.80703967656266	0.498924091066937	-1.61756004773557	0.105757445018484	0.64737088054839	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64009789954613	2.65626068296354
Merged-chr5-121943731-4	15.4811540634282	0.385433399098939	0.415231997242348	0.928236267095723	0.353285025644911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87687518751468	4.35120714931361
Merged-chr17-5560349-3	3.66731360787613	0	1.38491660764761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97469298-1	4.56880392020816	2.49470587406435	1.24256173798946	2.00771180842967	0.0446739250850702	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr5-118514164-3	9.83766936921019	0	1.35817670753038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70585409-3	9.92417988762608	0	1.30715285960942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12858685-3	6.80792340138948	0	1.30459054490925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21849453-3	11.1034508924653	-2.46541866751625	0.7492133299412	-3.29067645887952	0.000999467942944281	0.0190065351073713	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67665327266096	1.45391938817053
Merged-chr4-147922960-4	5.47303823920821	0	1.335824172467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84082255-3	7.08991606208644	0	1.34724420555543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52149626-4	7.39899443460877	0	1.30384726405367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6718358-4	7.29975193489057	0	1.30010107816719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9407194-4	7.05222214142368	2.45378360096432	1.22883078093816	1.99684418638257	0.0458421118581299	0.347805320051707	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr6-145632435-2	3.48282514137889	0	1.33063038420077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66883828-4	10.1181781853524	0	1.29370273114053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31060651-4	10.6851768626153	0	1.29457046442271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59531458-2	4.05544318490781	0	1.33375717395481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98937899-2	4.1050914291476	0	1.3400683975088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135680879-2	4.08904474550381	0	1.31867149270427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4836987-4	7.92695172158597	0	1.30032131169463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25241092-4	11.0320529122521	0	1.29114180930666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106429844-3	9.47598662026323	0	1.30161552907806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21969477-4	6.86659235401503	0	1.29923019782537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167319397-4	6.81027711288537	0	1.32043098298645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67115659-4	13.8120665142851	-0.756604689226705	0.555560605362836	-1.3618760616271	0.173237002051898	0.91930689752179	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05037230892926	4.21532663089677
Merged-chr16-58509263-4	6.47984774483365	0	1.33207412241144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123831974-6	17.5903977406218	-0.548537073855702	0.493530486843913	-1.11145529704467	0.266372421693209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54672384018718	2.48122800505666
Merged-chr8-104115718-2	5.41037863147919	0	1.30322802511892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22117072-2	3.27565361660737	0	1.43472204774038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6330830-3	9.27386315593002	0	1.31080130967017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29162988-2	3.83641563742394	-0.140157494884472	0.954526929519477	-0.146834510949868	0.883262644107441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74210065155517	1.17564474993106
Merged-chr15-67903824-2	4.77191790373255	-0.352800123219236	0.895023500683207	-0.394179731537696	0.693448348712836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7151021875311	1.27663763006505
Merged-chr13-28457647-2	3.09059397539658	0	1.43249715061127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68692131-1	4.19001725462992	0	1.4003155195193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128078954-8	28.4475819686824	0.949635994209722	0.350688819632353	2.70791636643928	0.00677070821246131	0.082059235393513	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79962239056548	4.56334221478249
Merged-chr9-65740795-2	8.30451376835438	3.15120047816713	0.832135828956157	3.78688234361935	0.000152549287939679	0.00442846991102012	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974818030623421	3.19402432836736
Merged-chr11-26789453-2	3.17097075920982	0	1.33128814929468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57960961-1	4.67201127237636	-0.0851004432500774	0.917763104902391	-0.0927259363505665	0.926121291548558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87547137628665	1.5268023559189
Merged-chr6-31502873-1	3.02159491335622	0	1.43550484156684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13641413-2	3.00558537786781	0	1.35390282123182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116006947-4	6.73208203267623	0	1.29646265544289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25205518-2	3.21148335459581	0	1.31639656837354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36670015-2	6.63173207636051	0	1.29463705668235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113692793-2	5.8591152289505	0	1.31305882254612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122912229-6	21.6951941770536	2.24155510815012	0.483861626487115	4.63263665776523	3.61037859455934e-06	0.000224475546755542	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71617522953393	4.31875506601964
Merged-chr18-10823050-2	8.37658957849822	0	1.3206679690482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33785517-4	6.96598646626653	0	1.30268614709255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38247305-4	7.15858518405926	0	1.29708486725067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97633092-4	5.36079135119505	0	1.30913114067457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73536612-3	4.8065885617312	0	1.3177148640716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28015613-3	6.26992388362393	0	1.29778259074667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121135119-3	8.41147244092188	-2.89496602538125	1.06882314526041	-2.70855476719294	0.00675769578266378	0.0819881894938632	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70947881997609	0
Merged-chr12-86803836-4	7.53616359186203	0	1.2971585118546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85534390-4	5.67557748056484	0	1.30890809516375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88861135-4	7.13395115623406	0	1.29334665337363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21704711-2	4.91350336405812	0	1.31936929428666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34000845-4	7.1002755331353	0	1.32036920078449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126401157-2	4.18968179586448	0	1.30442149622243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50752387-3	8.20052018498667	0	1.29009302623789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133929486-6	23.0983666207157	-0.402055994349536	0.49953597432754	-0.804858939119993	0.420901085421738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58197491337447	4.05755118075239
Merged-chr19-29816270-6	12.1433758369736	0	1.28715362713254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64256282-3	8.61461930975794	-2.91734435403164	0.790497997110093	-3.69051454234784	0.000223800893188746	0.00595156421515467	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87470870198146	1.29072512625674
Merged-chr1-171038091-2	6.24090926084071	0	1.32219670484189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98831334-2	4.4225924787505	0	1.32909839985561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35544531-4	7.83824922325993	0	1.29898958110985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86547545-3	5.04871378862054	0	1.39238771153397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3102060-1	3.1031811171082	0	1.36324255398306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55766083-3	4.880201223989	0	1.33000901776478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42144211-3	7.14693240190434	0	1.34869162714516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54182063-3	5.57517947971451	0	1.40143741230212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68247356-3	9.66090316459468	-0.0108624164943355	0.537932214356571	-0.0201929094492477	0.983889484173644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91144167969167	3.77830938905399
Merged-chr3-132169218-3	7.05368220279584	0	1.2976945720304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108848666-4	17.0243391851769	0.75500783073497	0.797168827328112	0.947111583960886	0.34358192254346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862813066341065	0.905469781553611
Merged-chr6-135193173-4	14.7585875920528	-1.42732128980294	0.364961426356487	-3.910882593956	9.19594676598814e-05	0.00295727528233396	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38853490113368	4.11074741597711
Merged-chr12-112630999-1	3.10593046173669	0	1.37989464839562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65128045-2	4.22137851329831	0	1.32806842136676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136761797-4	8.96265573427585	0	1.31111174949283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140619618-3	6.04650494825751	0	1.29822189703202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68220445-3	7.15449851329401	0	1.29645693769945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96126895-3	6.45874613820854	0	1.29940983245025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27405780-3	9.26842507114079	-0.217777620105108	0.660647829420618	-0.329642527238903	0.741670084947251	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52602110072203	1.91160626283417
Merged-chr8-25012629-5	19.9643293106988	-2.74908155111773	0.520214109968861	-5.28451939006861	1.26035199958127e-07	1.50840589312523e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10519198435133	2.13939166524368
Merged-chr10-50612224-4	8.28174802792663	0	1.30090297950997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60389663-4	8.56026317323603	0	1.30100773249789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47704649-1	7.53616713695012	1.48337504384423	0.607540834071842	2.44160550312708	0.0146221151484755	0.146931683298829	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.140669711817	3.51144681212044
Merged-chr2-170324929-3	7.65848234112962	0	1.31449256443222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134362802-4	16.4989395434985	-0.0896673460775735	0.623157639467758	-0.143891914980227	0.885585820158449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3574319311514	2.6469783255366
Merged-chr2-113449518-6	23.7873173683058	0.909817902830642	0.503324136021241	1.80761826766886	0.0706659330913528	0.479117665883746	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49674022623567	3.17130646544316
Merged-chr1-144256694-3	5.0314154157036	0	1.35023203842678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32542345-3	6.34633893719229	3.79207631958185	1.03421678114163	3.66661650509667	0.000245780966621348	0.0064012766220959	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.63476526644182
Merged-chr13-91372046-1	6.22264463212823	0	1.3027247221902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21896531-6	17.6628461329768	-0.107354154772594	0.396234933570367	-0.270935613387882	0.786440553545033	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58613553177806	4.22291078472747
Merged-chr15-79946201-8	23.4727847523172	-0.188405834363839	0.316971073250719	-0.594394410920938	0.552248345800671	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0519066352024	4.89683140993362
Merged-chr10-23177504-10	24.2972869010972	-0.0386659747990731	0.544571574627554	-0.0710025579750794	0.943395719661402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45429439018499	3.09316302394545
Merged-chr12-78894363-5	15.4761213517317	1.58247102614974	0.548474472668379	2.88522274965847	0.00391136806925695	0.0541509020876408	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99285269897631	3.13105597578932
Merged-chr9-90303327-3	6.90444154791734	0	1.29247562935159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150473062-3	9.57524430118922	0	1.30026642785232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5165122-3	7.35826695608021	0	1.29569483492904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31332723-3	8.86824663126333	0	1.30824054769632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24395220-5	20.0038374146121	1.47972257419007	0.394552798499153	3.75037911229833	0.000176567413638489	0.00496684210573428	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1305289211738	4.50381189501533
Merged-chr16-28911250-5	12.2901764081596	-1.64124186144745	0.546296617145688	-3.00430537172768	0.00266188006189981	0.0405556573851491	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89769341216876	1.63900399389441
Merged-chr4-40174540-7	25.3421322438983	-0.572290652312138	0.327934117072221	-1.74513910727411	0.0809606576465518	0.529575088545703	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81171082805895	4.21891936760049
Merged-chr15-59435894-8	23.6391655516343	-0.0995876238861242	0.379461382655556	-0.262444687227954	0.792978624242687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41640412457287	4.29194778639953
Merged-chr16-39101988-6	17.3615364480305	0.239682846047298	0.469464587487859	0.510545102730452	0.609669624773263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04897878281042	4.09543826515439
Merged-chr9-113026824-4	8.55643342814893	0	1.30778738901311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4907623-4	5.69889562238742	0	1.29139621720128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9879665-8	25.4054312648498	-0.926905722458116	0.390811023457577	-2.37174917497877	0.0177041046794077	0.170507358051669	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66436302611148	3.7668512965089
Merged-chr1-105993499-7	25.2196154476747	2.34624635022119	0.430045426167105	5.45581049688806	4.8749963078654e-08	6.76351398585504e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59716965296477	4.7878612662368
Merged-chr2-128803623-7	21.4168796823273	-0.306235654127946	0.368509436212203	-0.831011702917706	0.405967018182235	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29843958549856	4.05460778238123
Merged-chr19-11571626-1	4.42771956246374	-4.26876729101981	1.13424261648692	-3.76353985379374	0.000167525014220297	0.00476143225661571	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78823012772927	0.423054662900563
Merged-chr15-86182018-2	5.3710853434952	0	1.31887872217714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73208337-2	2.807346193023	0	1.41572521927117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47284236-3	4.99538504323418	0	1.30935865416574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-13421654-1	3.10170767175208	-1.14439412202575	0.989641511614606	-1.15637239201765	0.247528869133522	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86430264101115	1.96695333413634
Merged-chr9-7244920-1	2.94474908171064	0	1.35322631694852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41338109-1	4.62361491169621	1.34426587166548	1.12662901001128	1.19317526862905	0.232800738268242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	1.11812572528152
Merged-chr12-54874924-4	9.79292552139566	-2.92917066127414	0.83740988636735	-3.49789357512934	0.00046894822217425	0.0104908902862713	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82985465973918	1.31470332505763
Merged-chr14-118595613-1	1.99059371638483	0	1.45009692713325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58503631-1	3.40344397428535	0	1.32012637034886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145691669-1	1.67962285324272	0	1.4058424004781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59295433-3	3.85338463868852	0	1.33593670240287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74991307-2	4.37293671201843	0.940680730340909	0.915624857288925	1.0273647802946	0.304248729174012	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913105633848431	1.24302299519605
Merged-chr2-165300535-1	2.68067257258417	0	1.34103571670844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47158277-2	4.14553257802375	0	1.33376647184059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83640817-3	9.8358621443961	1.88544250004448	0.583241406658586	3.23269657901392	0.00122627733318566	0.0222096226758177	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33905571645726	4.39553953094181
Merged-chr13-5601819-3	4.12374922657139	0	1.36654448756479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166708691-3	4.99932770357721	0	1.35609623282806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87487657-2	4.487779791789	-3.00008977317565	1.11323101341055	-2.69493908904354	0.00704014994695	0.084458534685771	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04569621790939	0
Merged-chrX-13734940-1	2.52391403824728	0	1.34608003826843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112803768-1	1.76103005950058	0	1.48552051127186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32279701-1	3.369012268262	0	1.43183127479143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136377963-3	6.45267838998091	0	1.31917454209049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91078683-1	2.76212071881148	0	1.36912624372975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132591723-1	2.49362120176508	0	1.4181640335508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-36971012-1	1.89459579917512	0	1.41512777685201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110972257-1	1.60776496284237	0	1.63683875808954	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56022509-3	14.6958715280209	0	1.35162219652452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79351422-1	2.7800105252573	0	1.3571511950505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134703533-2	4.3582880204873	-1.68528309229863	0.976823030379939	-1.72526961372229	0.0844788953356359	0.546407789231166	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27772833237111	1.34805514843284
Merged-chr9-65844666-3	8.05907776319416	0	1.29400179674244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88066834-3	5.80030605256747	0	1.29991930109232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144642148-1	2.70357883546653	0	1.37839042344444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102839332-3	10.6207820908083	0.431926027861997	0.499946737713176	0.863944086999516	0.387618606492642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74959625501533	4.09663270934069
Merged-chr13-110896075-4	8.93711888290832	0	1.31287355746805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159924955-4	6.96852432664465	0.108451170356702	1.30479055986138	0.0831176847019984	0.933757964143668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr8-125726722-4	7.88617965902041	0	1.30498289382862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82919795-3	12.079274273008	-1.84035725666428	0.753482567847229	-2.44246826031072	0.0145872122448619	0.146626053123019	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84122922175804	1.93200840085195
Merged-chr5-76430103-2	5.25539573839211	0	1.33563238557791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145211440-4	8.61469137423044	0	1.29699422712422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17217250-8	55.2196078756211	0.181143530260153	0.259416298497315	0.698273513689922	0.48500615998174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.16039597044351	6.37540584963295
Merged-chr10-4126580-4	12.1981411849723	-0.00242018022877601	0.476904928487016	-0.00507476455832412	0.995950941088606	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61682496653807	3.64678338011461
Merged-chr8-104436237-4	6.6833172194763	0	1.2948528754151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26322901-4	7.71504651024652	0	1.31046922924674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96890135-4	7.33125912813346	0	1.29345853916433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77116839-5	11.2272213115859	0	1.29715067212917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105899947-4	7.04173293716458	0	1.29219165640463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34856756-2	9.21156240074957	0	1.2901378870868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31373249-2	5.61053464640301	0	1.32792271228625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5162690-3	4.249297649767	0	1.35006370658151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110787497-3	5.70276636973428	0	1.31117575601958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31157145-4	6.76269469671943	0	1.32764206229992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44343883-9	25.535588451795	-0.978177010582662	0.363717126578064	-2.68938947083845	0.007158284803287	0.0854053822814665	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13640659363087	3.16371883413372
Merged-chr17-87098043-5	15.7932387642142	0.00120249240821925	0.571138842642553	0.00210542922042484	0.99832011177227	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05793842242626	4.97278880394797
Merged-chr4-142077582-4	5.26058165444942	0	1.30697664947861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40944258-3	9.28059836208951	0	1.29726323798839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78918398-3	5.88485631623059	0	1.33997558269721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70625279-7	32.2627993860711	-0.516087708018346	0.288818712674965	-1.78689151834545	0.0739550236273383	0.49621778149215	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.72394504003969	5.24028854456596
Merged-chr7-84591525-4	9.93336010627496	0	1.31941812905864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31818247-4	8.98265755796094	-1.64270706130511	0.656310092036152	-2.50294347327304	0.0123165213666395	0.129958889911904	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55955816147138	2.21312207999876
Merged-chr4-149781215-5	16.7261721329139	0.144025101880573	0.51537621719346	0.279456243954908	0.779894713107958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15869258658168	3.52416548764244
Merged-chr10-62503342-3	10.5511939186182	0	1.2955196018052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88187928-8	25.3881644228585	1.2166276328142	0.364173219842095	3.34079379406792	0.000835392431227946	0.0164972964070781	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90837193726202	5.27091219452001
Merged-chr2-174344265-6	27.2926926847718	0	1.28712088730333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148688749-3	10.3954398045958	0.727724625038433	0.569521492314635	1.27778255054227	0.20132610865419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17118284016984	5.14649982605074
Merged-chr9-16229092-4	6.52582306524549	0	1.30754833995876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127754494-4	13.2429755307932	-0.641169575333969	0.545935109896214	-1.17444282976389	0.240217698516889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28861709548989	4.11012492857522
Merged-chr1-105169884-4	6.16047800536163	0	1.31280114034307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84634270-8	24.0936817603137	-0.937826042724056	0.35578870822523	-2.63590727036331	0.00839126594660896	0.0967082300788552	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10808841616449	4.15190639589362
Merged-chr2-167694488-3	11.1128990502935	0	1.31950773246671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116020712-3	14.6453199401426	-0.213030787648678	0.588363593808675	-0.362073367370776	0.717297205091936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42788719343548	2.51392635472486
Merged-chr2-34958238-3	5.45338057727577	0	1.70819074330145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64661527-3	7.95168884131551	0	1.29512715532382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44401873-4	6.35735180912497	0	1.32195611010511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93901060-3	4.08568324045938	0	1.32192506844001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173733367-3	11.086147265896	-1.92819510783674	0.690553021503383	-2.79224773159188	0.00523432647222544	0.0675172320675175	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55383272716104	2.40445353918784
Merged-chr1-51789534-4	8.4020483581456	0	1.29750406623143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92253967-1	3.30642688904884	0	1.35236496689908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-138246086-2	5.39445388318912	0	1.34283059763192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-74804284-2	4.99645298945728	0	1.38132320554213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60832885-2	3.33594184948732	0	1.33345745814496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35796224-4	12.5771043954746	2.96622123216777	0.59077920578416	5.02086262198517	5.14399410295734e-07	4.73435829087113e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68980503224317	4.61954103847609
Merged-chr7-66392622-9	42.0569819292927	0.894114177109989	0.280440299932692	3.18825139369978	0.00143136033939874	0.0250156920937015	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2006544270505	4.99107014545704
Merged-chr8-26917785-4	7.8265447573016	0	1.32236365001015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53149188-2	6.9032983734325	-3.11342435185291	0.975781226335449	-3.19069917295437	0.00141928975910096	0.0248645867555526	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6613786032495	0.581381506691384
Merged-chr6-87923854-2	4.79825979275991	0	1.3376783684978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89215905-3	6.79239203171246	0	1.30135259966169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3743264-4	9.82830222395655	0	1.29748233873861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55932019-3	8.33982477855808	0	1.30538217148811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127214390-2	5.29149685364106	-0.431919124459269	0.745052129814144	-0.579716649581302	0.562105713653315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23570348922269	1.86076615204117
Merged-chr11-77411479-4	5.09985378446396	0	1.33968421689734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21821103-4	15.038263837994	-2.88977377740729	0.550831688766716	-5.24620103806545	1.5526747334081e-07	1.79259864186017e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21904332600874	1.96144955975915
Merged-chr13-89838822-2	7.15031275165477	0.888219020479718	0.776400091340433	1.14402230291631	0.252614387722777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98164476250528	3.25979015842504
Merged-chr2-45191932-2	3.66200068194172	0	1.33037951253688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45935326-2	6.10288864560223	0.556332403464777	0.774214021846798	0.718577018455065	0.472401577560142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37444898294419	1.5122114716189
Merged-chr8-117346059-1	3.29037919770478	0	1.3683222913463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79071776-2	4.25835046560788	0	1.34470515662517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34778147-3	11.187825004384	0	1.35783895466241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84961517-4	6.79383386226479	0	1.31260958782581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50345670-2	4.82887415447691	0	1.32624548260417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105155749-2	3.24596593197548	0	1.36752809206564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10904997-1	2.36106171367139	0	1.36292649952506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90247295-1	2.51935208106239	0	1.3666152139657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132264834-3	7.74447470038619	0	1.32262033058313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-153817434-2	3.75499909633158	1.44512097293522	1.29757077779999	1.11371263722924	0.26540248612422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.73596151290311
Merged-chr6-122945034-1	2.04103843359182	0	1.35319449260398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53845343-7	15.6497358309798	3.46201469749061	0.944489903157248	3.66548619092461	0.00024686913290163	0.00642634107841104	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.23314128320855
Merged-chr19-21068967-5	36.4959535967536	-2.20088695982167	0.313750955309146	-7.01475779620523	2.30347636296247e-12	1.34395505726916e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.58358308993854	4.43157956029294
Merged-chr15-30468481-4	7.48500186044032	0	1.28884671640516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24215080-2	4.50115921862059	0	1.32715108077444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129263296-2	9.43257596267523	-4.14376186319166	0.967888486143168	-4.28123892629789	1.85855678752869e-05	0.000828439644187245	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20147796410434	0.688405034366054
Merged-chr9-7603525-3	4.91068661978983	0	1.31016544725519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55106792-3	12.3437218297631	0	1.29486005010665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8497273-4	6.10665324772216	0	1.30616910901357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31395007-4	7.68295098563614	0	1.32141411096734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18048668-12	50.0746319618793	-1.3216026158783	0.280654785940954	-4.70899725243363	2.48938426492156e-06	0.000165991126709759	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.5969967884332	5.27604143001908
Merged-chr2-165329965-2	6.41452180613771	0	1.30576267041594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42190321-2	3.30813839389404	0	1.38397570201263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70528810-3	3.9529290642871	0	1.37294972258927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80131630-3	4.2357355249543	0	1.3396356036759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153797763-1	3.38002638306805	0	1.35314126855141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116231412-3	6.42452470770067	0	1.30741158521122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76780950-3	6.31493033023275	0	1.33624970829656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71537466-3	6.13472049156337	0	1.30789931342419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99211854-3	4.54161978237711	0	1.35336445234676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107259842-1	2.34955877504087	-2.15700357212409	1.23287491428693	-1.74957211565267	0.0801921748039384	0.525865344193091	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.805058992323882	0
Merged-chr4-135294112-3	5.96152561099248	0	1.33189157953886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69923183-4	13.2193011313131	0.448662913250169	0.568999736100214	0.78851163679828	0.430397494581567	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30745682182983	2.24969713319017
Merged-chr6-137473137-2	4.84178735663876	0	1.34575196864831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9455758-3	10.7527942455234	0	1.29162884592121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71256965-5	23.4220649723775	-0.415861221973701	0.275207975175951	-1.51107983592345	0.130768111441762	0.753426402359647	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30785657004683	4.93218901290579
Merged-chr4-19872148-4	5.93101932807138	0	1.29976878899371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123151205-8	46.7203495757785	1.01260995548187	0.344546083864403	2.93896811748522	0.00329306947238309	0.0475679791476793	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82077367926663	4.73594354720761
Merged-chr11-115657087-2	5.02607991716546	0	1.32958327623458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59728118-4	12.9573540033713	0	1.28863100767104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102793185-1	3.13153145746777	0	1.31967705970417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80143503-6	15.635870198661	-0.964331584228933	0.491898799724565	-1.96042678853639	0.0499459273060016	0.370346068608491	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18202032269133	2.96463452331606
Merged-chr2-157371937-6	19.6670075757214	-0.460375120313644	0.476853521372857	-0.965443474105483	0.334322735362258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45942376322081	2.9258007567184
Merged-chr13-119309456-4	7.80756962193163	0	1.34588005981796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33885084-4	6.87980057321179	0	1.311128565495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88676829-4	14.3520441633469	-2.34626509861256	0.636194583935417	-3.68796773480665	0.000226052305865109	0.00599027203585573	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1046448623331	1.99708834426639
Merged-chr2-167888004-3	7.2050588392866	0	1.29839049206033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56412216-4	6.15287828244598	1.30462996073721	1.31454371875038	0.99245840372461	0.320973961009973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr10-88350028-3	5.58592793746501	0	1.33011144283534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15061386-2	3.89804223345384	0	1.33460463950314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124278098-2	6.10848030833967	-0.50340617807325	0.678728845653435	-0.741689676661088	0.458275375938098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90257543171164	3.25131529750722
Merged-chr1-106883772-7	11.4060077870912	0	1.28829258778454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6711264-3	7.13051501204377	0	1.33057194748293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24919870-3	6.04381101605662	0	1.3397933652855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113654239-3	7.82133553386665	0.689561855810558	0.614951993809415	1.12132631937488	0.262148986360718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0149037865975	2.78236656153271
Merged-chr15-101453509-4	7.25635688488823	0	1.28952927328725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128008945-9	33.6849193255446	0.961352772257907	0.29486373944725	3.2603289033099	0.00111283085494109	0.0206061334788836	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19523743676988	5.19955918545914
Merged-chr11-63135815-3	8.27707178303668	0	1.29490491421157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122830594-4	5.68399953875793	0	1.33149828302723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70790057-5	12.2911952799381	-2.26883934477917	0.976145932639119	-2.32428294675685	0.0201103341890728	0.188055222942066	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44090871003597	0.563523181795778
Merged-chr4-138068300-4	21.8091159900634	1.28159970531253	0.485208537191977	2.64133791365145	0.00825793101336894	0.0954071357849376	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13373652960512	3.85560996172457
Merged-chr16-90259931-4	8.92228847198017	0	1.29561349872025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70792837-6	22.0106133291477	-0.384127724963507	0.357867488479127	-1.07337977695594	0.283100754315262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94040470450354	4.10324608068772
Merged-chr1-138541724-4	5.99350460828939	0	1.29611434239998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20663180-3	5.17906337917143	0	1.32789698340883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29171253-9	31.9632875079319	-1.0619593206051	0.311398971089408	-3.41028525845769	0.000648949657599769	0.0134922889995274	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95908720930902	4.90115832874871
Merged-chr1-120481122-1	2.99971124360396	0	1.48407055069642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132203979-3	4.05761874573301	0	1.32721730672851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34565465-1	4.32617891803946	-0.21887951394798	0.893405215288585	-0.244994667819661	0.806460560035982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51988219047703	1.1517642783294
Merged-chr10-127559058-1	6.93795787954663	2.21085808537869	0.820354358173685	2.69500376678759	0.00703878353224579	0.08445764757586	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43331113226431	3.11208997221996
Merged-chr8-83106966-2	13.7288704724821	-0.751128524297358	0.532735106612467	-1.40994748604724	0.158555189643721	0.862477934109595	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06150621197388	3.55298873584557
Merged-chr3-101618195-1	3.33462972503378	0.076070403719674	0.93927477865631	0.0809884449665488	0.935451141897922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44128411238817	1.15307255889252
Merged-chr2-13479835-1	1.48234421417901	0	1.43587471503793	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92066173-1	2.04834623383615	0	1.4021848330991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34229090-4	7.09582373469394	0	1.3014148429488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40851187-3	16.324021905206	0	1.28796931361828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22006544-2	4.27509803025751	0	1.34222469704238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3951630-4	5.65099671250301	0	1.30551126797822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134701466-1	6.48652035534715	0.464739206358955	0.762467224233593	0.609520241117374	0.54217966043159	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20305850456981	2.92717768006747
Merged-chr9-111064238-1	4.56057735572191	1.97557498264395	0.808603908846594	2.44319247165395	0.0145579709500022	0.146409597364693	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77071408864498	3.01874985413151
Merged-chr5-88980799-1	2.76747739149976	0	1.39828785639779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181291166-3	10.5298086169954	0	1.28822682537125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38090187-1	5.29652606989949	1.62793103598702	0.876714666689985	1.85685388626295	0.0633319447699185	0.441297639468447	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61615760169281	2.21892227282174
Merged-chr8-46781260-3	4.09232057364008	0	1.33164820722281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20379764-1	2.22475150878309	0	1.38541697535793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95800803-1	2.238628382655	0	1.39170194549957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27988342-1	1.64797433288257	0	1.48399685215696	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11096047-3	5.04648005290011	0	1.43961115997623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74390442-1	3.42787623582922	0	1.35162705580606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121605601-4	5.34518250746417	0	1.31149888313595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23269567-1	2.65960660903626	0	1.34836883220683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5945216-4	10.6911160487281	0	1.28412451397008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6679863-2	6.92245542631775	0	1.30740470209631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57571463-3	8.76302813191034	0	1.29380884991642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135177438-2	7.73746160990444	-0.684317053173041	0.932404848848027	-0.733926956748997	0.462993256777823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85539699941985	1.72583980988184
Merged-chr7-114527970-1	3.06931380365692	0	1.36145672077863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159733114-1	2.93479549308289	-1.33315690252152	0.952552677047701	-1.39956239129309	0.161644402699031	0.874115784406724	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04011606219313	1.37490486545505
Merged-chr6-115315991-3	4.17022423384405	0	1.36286248953238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83518450-5	29.5094862876036	-0.5082008241948	0.280248355859695	-1.81339448945502	0.0697709988712936	0.474132247529487	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50761761163692	5.01786740728402
Merged-chr14-103155900-1	2.00755074584891	0	1.53170967984611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124874975-1	3.189444128593	0	1.41254303789252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39490434-1	2.54169251307606	0	1.37877242867255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83149814-3	4.62044309115899	0	1.46208516658509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89830481-1	1.83411181455344	0	1.39162715570133	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72132936-3	9.20588274463552	0	1.33428938523347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75635837-4	8.58179395517264	0	1.29356979760937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-47550981-1	4.11055997267324	4.2547353220037	0.997323925902921	4.26615186049176	1.98873436432572e-05	0.000875243100249431	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.667447567553467	3.45608062929706
Merged-chr1-174121327-3	6.1287338472895	-4.59722783821809	1.06298711646866	-4.32481990326514	1.52656526093953e-05	0.000709999526984731	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36330130638109	0
Merged-chr8-71665739-6	22.2848438116493	0.673019681485856	0.372551720286845	1.80651341770122	0.0708381801978585	0.47998669879814	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78296188071311	4.51276762539538
Merged-chr6-143139663-4	7.15803355206796	0	1.31412851933072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154597670-8	25.9716994278702	0.519629987664714	0.401536097646541	1.29410528893999	0.195629054930344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87617229773129	4.40258509265732
Merged-chr13-111968342-2	9.00200387162884	-1.42813951165831	0.617876335309523	-2.31136787419263	0.0208125438640298	0.193268610465373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33436650900035	2.16286647593625
Merged-chrX-113785515-6	16.4472140395276	-1.27283127342621	0.419046440151873	-3.03744681130069	0.00238591506973618	0.0371531344861741	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40484070656046	3.89990859594029
Merged-chr2-126602420-4	7.6659660111092	0	1.30535440011977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84778137-4	5.62772857226314	0	1.31933352469541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150625602-4	6.9588565581531	0	1.29885443720731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94919584-6	16.0018468933199	0	1.29052127746721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48414308-2	4.9434462859727	2.49616373809803	1.23128094521896	2.02729015485101	0.0426327477665169	0.330903852660745	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-6712471-4	7.43823539317509	0	1.30090746344159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20969156-3	6.43383036169274	0	1.31095403627681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167388643-4	10.4156084740893	0	1.3187657763556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83565058-2	3.71635417451308	0	1.32168144214112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108641553-2	6.66473688877179	0	1.29318258331519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182707670-4	6.99565989618273	0	1.30871075325091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68140269-2	7.91206678804747	-0.906590646789956	0.725572942558801	-1.24948243465747	0.21148867416999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67807745280993	1.53308279668795
Merged-chr14-61083848-2	5.38201475539048	0	1.34478796823975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11999441-2	4.63490306302503	0	1.32453640118796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-60021804-4	5.85419344558275	0	1.3197849282832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133526509-3	8.12262199732744	0	1.28775476502497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110475102-5	14.6662872898606	-1.62548570990152	0.573747340052408	-2.83310369639892	0.0046098429135813	0.0611644253869814	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34445217617951	2.43049365066179
Merged-chr13-73822373-4	5.24839290106459	0	1.32798570696885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25396192-1	6.0283084576543	-1.74197925304568	0.892707701573002	-1.95134336802092	0.0510162133799977	0.376349681590577	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96635624893776	1.73112505087616
Merged-chr4-134307687-5	13.8192380000852	-0.161223782104942	0.452183778805019	-0.356544815762756	0.721432596132486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59716310990556	3.37328213657593
Merged-chr16-85117668-4	10.8971878334935	-0.212547830595734	0.731201186821022	-0.290683103948189	0.771293694975561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13981985210776	1.86170925882537
Merged-chr3-152149521-4	8.69721030953381	0	1.29840666712724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7865946-3	5.3889356658376	0	1.33450161148881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20820238-3	4.8953750333775	0	1.31776200935797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30787697-2	7.67257934473316	1.32165298607414	1.06181514662594	1.24471099350378	0.213238003465668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0.773587911294612
Merged-chr1-62706440-4	8.94882925305761	0	1.29333395330112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-16025190-2	4.54704433056895	0	1.31199171148475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31944175-4	6.28881724710879	0	1.30199756741368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8682230-4	6.61837339441282	0	1.32435969837124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10668320-1	3.17318220216627	0	1.42864691095449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8867517-4	8.43053705595406	0	1.30071203490382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89463330-3	4.7495460190238	0	1.3047567307136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131379142-4	9.32530648845573	0	1.29177208072627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165985606-7	19.9317445356082	0.958302830133129	0.434656575082505	2.20473561213523	0.0274726526047744	0.239459511419447	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05197654605236	5.09171983474674
Merged-chr3-51359169-6	14.338441433577	0	1.284914658204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26953161-1	2.43382358045896	0	1.48917523059749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10566682-1	2.15249420238421	0	1.38891500164887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17165166-3	3.62847137431494	0	1.37473853198032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34682772-1	3.89259247046836	1.42767110855354	1.35254732250811	1.05554244557308	0.291177307637893	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.609949614787909
Merged-chr13-81761925-1	3.16771635602142	0	1.31581329387616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150397454-4	7.50720185960149	0.932808617207211	1.02042685854514	0.914135696640862	0.360645547545929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	0.82780788634396
Merged-chr3-98051892-1	3.48062117365778	0	1.32656855526089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58818696-4	6.78704376909239	0	1.29433793530077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72154171-3	5.88365503948995	0	1.3547908183818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9028107-8	21.8148390233903	0.536597443514505	0.442174500486726	1.21354226198897	0.224922566637443	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70726214824323	4.18275990054545
Merged-chr3-101594444-4	6.2670816314633	0	1.31682856158465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21221724-4	6.27944909899073	0	1.29280181656656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93105549-2	5.64384436469725	-2.50511537914086	0.847511496465749	-2.95584825643967	0.0031181045692644	0.0456953714247928	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39637279205151	0.963545719069792
Merged-chr16-94223325-7	22.3208707749986	0	1.27988639774585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137953602-8	22.6462119384975	0.440817626017465	0.356348147636448	1.23704200215794	0.216071489673234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64407128956231	5.02339523320091
Merged-chr13-95799552-7	23.3670128592651	-1.60240417033355	0.381063917049376	-4.20507977438839	2.60990084933993e-05	0.00108628395478323	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67292299833722	4.12204834592896
Merged-chr4-149650650-4	6.85010738301922	0	1.289202622967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65682034-2	7.00808052988388	-1.82434299644505	0.675036235834526	-2.70258528298066	0.00688025315390651	0.0830979134936978	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00914093669278	1.64109723835872
Merged-chr14-75060747-4	5.72968771845305	0	1.2940324845496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67607595-7	21.3555896557913	0.0625326733859825	0.398332644835434	0.15698606226918	0.87525583259796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73288952906423	3.01492716769024
Merged-chr10-111455097-4	5.79760502806182	0	1.31929790956633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54493787-6	26.4317082211696	-1.60978131531468	0.420293492444722	-3.83013618876434	0.00012807235723387	0.00385313823932066	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.77147367066701	4.22235228999883
Merged-chr13-99306381-4	6.32669873918012	0	1.30507738378882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54935125-2	2.61883843338202	0	1.39842662504262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120969701-3	6.27527442251437	0	1.32455365456909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159738857-3	5.8426044021536	0	1.32515187772532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70958423-1	2.59164917347149	0	1.35572454744525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145517559-2	4.02004974696676	0	1.35060910083014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32176140-1	2.71817578665825	0	1.379983048663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68135584-3	9.92483544758845	-0.753810506482069	0.608176781619533	-1.23945952766352	0.215175368110487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76888138177189	2.49756168783462
Merged-chr6-94254184-1	1.83354058589945	0	1.4231340313673	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73324905-3	7.34184871087749	-0.047812789065533	0.738628449452739	-0.0647318541561163	0.948387500052049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38427556681384	2.03056478861164
Merged-chr4-139288259-1	2.37538707910543	0	1.37923485732531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68092144-2	4.23331178798137	0	1.40958463010192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40681299-4	6.76720570715274	0	1.29284136837245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83600144-3	5.50373301386251	0	1.30179699974355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103403881-9	33.8774382210836	1.44455908414256	0.414911507104105	3.48160766671652	0.000498413365366965	0.0109580679624942	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0176233020611	4.12550889905939
Merged-chr2-19580732-4	5.96888189478384	0	1.29737340592354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32400090-4	6.52536935503804	0	1.30044219546256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149858754-5	11.7822739717823	-2.48952898227148	0.683296954996833	-3.64340710735791	0.000269052780446531	0.0068457479675306	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03317809452752	0.905469781553611
Merged-chr6-115697879-3	7.47513858092231	0	1.30510027767272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10359025-3	7.35353298716363	0	1.31403445381386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121000768-6	22.6255650747042	-1.20034612179302	0.394859964792447	-3.03992865527395	0.00236634196746236	0.0369223930768375	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96042413962487	3.57108771091033
Merged-chr4-83235110-3	14.645453552503	-1.14689591016488	0.471903942437571	-2.43035882311283	0.0150838811883371	0.150277679544607	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83581097034287	3.609443221672
Merged-chr10-21696868-4	5.58014844260075	0	1.33503156545051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59056631-4	6.68965753756562	0	1.30372771888162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107810234-2	4.81092091357513	0	1.32437403646395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59637199-4	5.32819799998374	0	1.30080177163792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3956629-1	3.60794378277696	0	1.31031786295906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121464740-6	14.7575946784532	-1.40607363943632	0.650562295587929	-2.16132052068221	0.0306705888422625	0.261099569891413	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25942147078117	1.775524153257
Merged-chr15-78851983-7	21.2410496317082	-0.416646396778893	0.329913413519341	-1.26289620156492	0.206626485209491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52202684741342	4.11764658356694
Merged-chr7-100530986-6	20.555677578315	1.44977066509485	0.517491837528756	2.80153339619447	0.00508603766173651	0.066060866039323	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94092063390481	3.60410497958814
Merged-chr8-108971507-3	5.94492586016924	0	1.34737715848813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58818225-4	5.4333590146346	0	1.33317571094074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18595044-1	2.55040038903281	0	1.3757541321303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38112779-4	10.6469611478314	0	1.29716968791442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49553842-3	7.18352531090645	0	1.31118843079367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89695489-1	5.41835083610835	-0.572293397661747	0.749309640365292	-0.763760889800846	0.445009747516609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.409355574996	1.59225717122037
Merged-chr15-58020278-3	8.17023657044718	0	1.30233331644307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41463160-1	2.43913925720825	0	1.56819730706013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44389754-3	6.32681023824652	0	1.33068411411557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126051829-4	6.43503661381046	0	1.30988691976373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99976550-4	9.47027800599624	1.81228609251181	0.744793420563847	2.43327349903255	0.0149629938067049	0.149323731413094	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.700451271595348	2.51189205336242
Merged-chr13-36314480-4	6.74248490513916	3.83141502711655	1.05872390362805	3.61889914262539	0.000295858908026303	0.00739319166496628	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.81683205337095
Merged-chr5-24046783-5	11.6551975361245	-0.842406415716164	0.705769714588123	-1.19359955280566	0.232634649008505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83171276141679	1.93051054667104
Merged-chr12-86893880-4	6.02144233807167	0	1.30158382623038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-89117469-4	7.80651495822863	0	1.29714707730671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52284429-2	3.86646118379649	0	1.3722526164544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44126660-4	5.85154650691034	0	1.34720544844983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136087544-4	6.17013105930029	0	1.31821455002605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8353904-3	17.5219194687075	0	1.3163559791454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79721491-3	6.78154494569607	0	1.30460645909223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91852933-4	7.93366945440582	0	1.30489829468985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7850817-4	8.51468857162059	-1.17652063272418	0.671730525139686	-1.75147710085011	0.0798637623583184	0.524398684605222	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90739266721079	2.28989570630184
Merged-chr13-107844642-4	6.19894014390175	0.438274005468591	0.888000610186337	0.493551468817824	0.62162298231993	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.999832639119175	1.20275690226768
Merged-chr2-130728318-7	28.6426548144813	0.590891825136616	0.34510912424907	1.71218835903672	0.0868619620184059	0.557298161026485	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62497177509239	4.23293310271331
Merged-chr16-62782408-2	3.83237628679712	0	1.36419921472516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121460697-7	17.5624099371625	-0.561836274568354	0.460315667696707	-1.22054562552613	0.222258104562545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69883854799616	4.0204904562605
Merged-chr19-3899148-3	6.73813731967125	0	1.30597151560138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156002032-5	13.5227726477927	0.0335936982619046	0.446736871880231	0.0751979529258803	0.940057213073301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10895294809547	3.49584339212877
Merged-chr13-9388198-4	7.2919705445684	0	1.30474037186286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67170439-4	7.62073661880929	0	1.29035255722426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43322242-2	4.84165642026519	0	1.35558773441766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-18957483-3	4.33224659174163	0	1.32735090538552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99185532-3	8.47716397442688	0.977295036000447	0.642819737264272	1.52032518503499	0.128429267315799	0.743672033851859	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23155222984531	3.12394113821961
Merged-chr19-12441659-5	17.7139302042315	1.00621446836849	0.428507015427042	2.3481866857319	0.0188650632750364	0.179083111353766	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19344669613063	3.83887106305462
Merged-chr1-153518779-2	6.65466524252606	0	1.32105780472077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86283801-4	15.7976434500994	-0.222865166850365	0.487099139118498	-0.457535538358134	0.647286164482363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21123636830495	4.02948486174469
Merged-chr13-54824858-4	13.6328413657563	-1.04598179477876	0.494382659704741	-2.1157331760047	0.0343675072825847	0.283379070143569	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4186861723562	2.82925595730773
Merged-chr3-144628827-4	11.6214055821597	0	1.31072576192423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86689645-10	30.5013239440235	-1.48351508451615	0.427421795639622	-3.47084566030639	0.000518822110963835	0.0112972174818536	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07296757018402	3.51617517296867
Merged-chr14-120285325-4	8.00286240697903	-0.753024113079596	0.854846470489027	-0.880888134975651	0.378378370048395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58380959746719	1.10669213789164
Merged-chr1-119893529-1	1.48094552220186	0	1.54427625758839	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48001985-1	2.31561791032024	0	1.41522544715618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43868608-1	2.15780038285879	0	1.43405737856655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68905574-2	4.52649146511729	0	1.37692813165038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32693630-1	2.16136819278053	0	1.41344989853696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80953374-1	4.18354074473378	0.346224104029814	0.828048995532954	0.418120311596991	0.675859155083356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24515301461351	2.57368172511798
Merged-chr2-74606290-1	1.54312670011204	0	1.50280636266144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34044022-1	1.56656140402802	0	1.72850791971788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74485603-3	4.81497983187763	0	1.37840984186679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41466377-2	5.24326212315422	0	1.32439122405238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-59248680-1	1.4568653017118	0	1.63944950423302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17539523-1	2.65324869488619	0	1.4394617962665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123423528-1	2.13867345350772	0	1.4310869116021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95676589-1	2.18528626334915	0	1.45694781120826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17788427-1	1.49721666437188	0	1.50760963653352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44979295-1	2.43721493750868	0	1.42395264944716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27401334-1	2.40999572066848	0	1.38275893805362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65728114-2	2.50080799495416	0	1.60657373045668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75614932-1	4.12273550856608	-3.210709803768	1.1560906611733	-2.7772128186811	0.00548272668751604	0.0699481175561154	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4806182610679	0.683637474991079
Merged-chr18-10052404-1	2.09958096972156	0	1.41892173936429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128600635-1	4.17009088818947	-1.48946612249435	0.749989979059197	-1.98598136519472	0.0470353931082849	0.354875279766076	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13498277929629	1.41695929335733
Merged-chrX-129680760-1	1.58962410956896	0	1.6805550368148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102371231-1	3.72402562369997	0	1.33350151451448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110564027-1	4.06193738999226	-2.28097321657709	1.1693136050902	-1.95069415651	0.051093438914311	0.376599474966884	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78273126510384	0.306240821987646
Merged-chr4-105261429-2	3.45748424819313	0	1.40964766613425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45245061-2	4.27499442346155	0	1.34195800970971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4066674-3	9.42525575948798	0	1.29274737094197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131079109-2	4.42175668946462	0	1.40315923547276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50998574-1	3.4419937173768	-0.549187472243186	1.11632786537105	-0.491958939017118	0.62274837108318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36394532586931	0.581381506691384
Merged-chr11-77446757-3	9.76631524015617	0	1.29569603149839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105649990-11	38.133242031313	-0.347409984125307	0.353789863928931	-0.981967036215301	0.326116088130902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03687729429516	4.71854737916031
Merged-chr4-55472805-7	18.8207947417246	0.572142573948034	0.430629766723238	1.32861826599122	0.183973942657095	0.959454210444573	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2003041616071	4.65970409235354
Merged-chr11-77508237-3	5.4355863200677	0	1.2982202543681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83585491-3	5.66599877398269	0	1.32194517794411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88584632-3	6.59781888752406	0	1.30630702386499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85506951-3	9.25373875755138	0	1.30157793755533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5728340-2	5.84934535470666	0	1.35235825872936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64096278-4	10.5317595049274	1.38835572259626	0.806924941910749	1.72055125636433	0.0853322850262673	0.549967797349488	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862813066341065	1.49705754145624
Merged-chr6-137395244-4	5.31551537959371	0	1.30228223901042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130750691-3	7.80271971314038	-1.48216033552404	0.91417619515221	-1.62130707776444	0.104951797860536	0.644152939464359	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31204652481073	1.11145969726662
Merged-chr2-143093896-4	10.1228941595206	0	1.30201425737125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57417376-4	5.9350742446371	0	1.30154360484837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-163899815-2	4.59501139406223	0	1.31490616393148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117110628-3	6.10878007550641	0	1.32914760343872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95840352-2	7.61498364019265	-2.07004300608148	0.785971390880582	-2.63373836516143	0.00844505349380098	0.0971909942948078	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95252408068134	1.26514550294121
Merged-chr6-134122045-2	7.6766071450346	-3.58008459305278	0.987186297339426	-3.62655417999774	0.000287228574006096	0.00722727701078257	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49346349061515	0.729295484888209
Merged-chr11-58275962-2	7.45138927969435	-0.909540337500885	0.641371652044298	-1.41811745904552	0.156156474794902	0.85315125474271	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59791814679926	1.80689471818942
Merged-chr16-30772993-3	7.39853894083335	0	1.31372833456297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34089221-5	17.056186732652	0.92977357438013	0.435220492683382	2.13632765462754	0.0326527162956148	0.273449237351435	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31163981095072	4.24648204358449
Merged-chr18-61040038-5	11.4813437115505	0.495177417080559	0.492460417220748	1.00551719440751	0.314647874221322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95019967846682	3.98166973010223
Merged-chr8-33443768-7	28.3748384834153	0.753284149402908	0.366048369503391	2.05788144999763	0.0396015148348064	0.314167850964581	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94826578611809	4.76559169829301
Merged-chr8-56305389-3	5.95147632407626	-0.861461275467243	1.17878997222413	-0.730801326585641	0.464900513151419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850726719819399	0.306240821987646
Merged-chr8-13648493-6	19.3392327929921	0.621155560641277	0.514368229701806	1.20760872225989	0.227197802613969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86540682798152	3.14181421519575
Merged-chr19-17124397-3	10.8930716127378	-1.07286317951143	0.693529867412256	-1.54696031118973	0.121872816326763	0.71772720400943	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87577835300903	2.77979544312931
Merged-chr12-101740674-2	5.60726614962712	4.57868537743899	1.02503550760178	4.46685538547978	7.93777486192778e-06	0.000420341844511777	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	3.31108014808538
Merged-chr1-136579574-4	6.31288277811772	0	1.30216565811783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73691332-4	7.03045766065723	0	1.30483180946664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32494632-2	4.68045394359318	0	1.30976601882173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60455490-2	4.85971971884705	-0.225969163620691	0.961755575774237	-0.234954877634872	0.814243755327127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87707114803379	1.66069583796294
Merged-chr1-92666304-3	3.97169116777494	0	1.33981964510684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8135398-7	28.040553921475	-0.0678137527862139	0.342836477726286	-0.197802034474159	0.843199954343148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18537497780471	4.10675718452212
Merged-chr3-65950118-13	34.3899174796791	0.635515357323111	0.360490894669745	1.76291653054184	0.0779145685826009	0.515459615019252	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61385466613332	4.54342238895105
Merged-chr4-136163696-7	20.9786088895151	0.523553296615962	0.392444396609808	1.33408274175592	0.182176741184712	0.952421514386396	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48685523480201	5.02638929808815
Merged-chr8-121861506-4	13.5988523968761	1.20770554866555	0.573037881289258	2.10754923557301	0.0350699985977687	0.287430594301993	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51283655547145	3.75255921623828
Merged-chr4-56831211-3	5.9918764407112	0	1.35359773775762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36285170-1	5.08900577632022	0	1.31208078125868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99782144-4	8.30620486688855	3.2541024573257	1.06323098994614	3.06057901631567	0.0022090946182037	0.0349698393704309	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.43116362910629
Merged-chr9-120051810-3	11.8080995951238	-0.216151910463714	0.496488162936363	-0.435361659350214	0.663299935541045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36082432130799	3.15199539558998
Merged-chr15-41657278-1	3.2750088812183	0	1.34153165152726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57577478-1	4.24923838085191	0	1.34681425887726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-42181841-1	2.67238246525666	0	1.38830316178184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10390580-2	8.3047638457348	0	1.29174681560086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30699949-4	8.15945574260213	0	1.30104672513209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61789176-5	18.1085868242038	1.19066062457931	0.665641023190873	1.78874285552844	0.0736562377245721	0.494670144948601	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84202496347566	2.54314374101268
Merged-chr18-10869610-4	5.09427777476907	0	1.29647086384533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53540055-5	20.1888115825069	1.8527561725868	0.544022415880236	3.40566145530789	0.000660039723460706	0.0136490366358428	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58340089843261	4.42135453372755
Merged-chr2-117780501-7	23.3925931203401	-0.876907112378179	0.426868765958844	-2.05427799433497	0.0399487933348767	0.316028107394393	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89513421134781	4.06066963943916
Merged-chr11-64610822-9	27.0968474617347	-0.741712685159054	0.356659746186589	-2.07960862724055	0.0375614450361644	0.301682668059636	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.62763708077647	4.76385141171648
Merged-chr10-111977777-4	5.99854748976971	0	1.30374716388482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22000781-4	10.5589704997335	0	1.29271852234057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51756067-4	14.4571105160348	0	1.33171045652824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52850566-7	17.503748538047	-1.01232588416785	0.532243244806355	-1.90199855807689	0.0571713431046193	0.409595284126133	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45427396042877	2.09032553771468
Merged-chr11-31902482-6	16.6011762085595	0.577612514199696	0.400518456479638	1.4421620398636	0.149256666578452	0.826612754751252	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42894746981622	4.26185472223806
Merged-chr7-80628900-7	19.8029657256307	0.735775789457917	0.402799418341909	1.82665554107967	0.0677515768285557	0.464369051755695	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64821974219087	4.38355191106216
Merged-chr3-107771430-2	3.2023053905092	0	1.33424725738259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151953747-4	5.99011529252595	0	1.3270688730321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119955635-2	4.66332729071498	0	1.32231737540429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27354955-2	7.59604744440243	0	1.28927036609151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127540611-2	14.3407096643752	1.43359868011593	0.655218366080577	2.18797084198283	0.0286717263125657	0.247402961523956	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33692618208503	4.90052965671456
Merged-chr12-111696513-4	7.66161327535029	0	1.2978373983847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85480819-2	3.92855761086593	0	1.49877881846215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123027753-2	5.1205415602441	0	1.32557309678941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102283808-1	3.7065355212367	0	1.31548672067481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137541413-1	2.64606087068694	0	1.39473173711068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91063342-4	9.45377433857553	0	1.28928629271796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43360554-1	3.55632804366387	0	1.33677788335534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17718021-4	6.19997724536538	0	1.31668938090114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71262618-3	5.33329874297056	0	1.31049520910876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36816262-4	9.014354444932	0	1.34209345204844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20088029-4	6.03999947304563	0	1.29634747544353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30981860-3	4.62132094826196	0	1.32249257374947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98805563-3	6.36615424841195	0	1.31962843686739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-13152377-3	13.2712292634226	0.985681627178751	0.530691641535548	1.85735283926217	0.0632609714433627	0.440850105570863	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16401457024283	3.43880202201474
Merged-chr9-60744624-4	8.49950582588093	0	1.30096960064276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55430158-3	5.99661861764222	0	1.3112800908679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173224269-4	5.64441403504757	0	1.31107015142005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98846468-4	6.93275497054945	0	1.3256831509096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121845546-2	4.29614355890574	0	1.33199807855139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82820922-2	5.48872591972293	0	1.31082401704633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149221621-4	8.99824988540761	0	1.30604647194091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47256123-4	8.1699475712596	0	1.30033975527351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59317611-5	12.5879845191897	-2.30381911412347	1.04753513387508	-2.19927622436977	0.0278582872193001	0.242045956206938	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28500905745516	0.469435083901436
Merged-chr18-77805664-3	5.13101593604371	0	1.29918816924731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155596597-5	13.5683437418327	0.144323978306239	0.430404891850063	0.335321417202936	0.737382639425997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74914077442241	4.60792849238363
Merged-chr11-109269857-4	12.9291906793336	-1.04564344513486	0.520837355239931	-2.00761991169618	0.0446836970056908	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0937012410188	2.37233207268852
Merged-chr3-109273331-6	18.5176180698166	-2.51014802582598	0.71193003342339	-3.52583527591281	0.000422149452445619	0.00967243272072629	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69715208848744	1.46261730325446
Merged-chr12-32656246-2	3.95316742931801	0	1.35005626561552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106241664-2	3.55167960942148	0	1.34139291685072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134703710-1	3.51966794096376	0	1.42997443931497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60707677-1	3.10589714646679	0	1.41090193962248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-14505001-1	3.62553845354626	0	1.33009157927553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154285541-3	6.33632319607859	0	1.30611782793984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-3976437-1	2.11750611342125	0	1.4939049946385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92332546-1	4.59795744172178	-0.777200444763717	0.896695133986026	-0.866738778104966	0.386085153191207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78222984282665	2.85351455322964
Merged-chr13-49252920-3	4.56757670722211	0	1.3278819049952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108576870-3	5.3797020892225	0	1.33979059131171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100528599-3	4.26242496381013	0	1.32559687243309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133680354-3	7.71737040986546	0	1.34022610586554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165874856-7	27.4993883799642	1.24142379647536	0.36159264015573	3.43321090811113	0.000596477914465723	0.012605900969818	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35983990366678	4.48692994535958
Merged-chr3-52844222-3	6.56136530453445	2.47005079879369	1.17840492473222	2.09609680590479	0.0360736043074823	0.293338196500341	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-35506808-3	6.49829802279753	0	1.31545745507534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31905989-4	10.707946798925	0	1.29434023709627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-56305094-2	4.06340209155797	0	1.31922327310176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14706609-2	5.89439442825398	-0.85548518951045	1.12409569764989	-0.761043024449773	0.446631369578622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11587543659717	0.469435083901436
Merged-chr11-43470346-1	2.50662705571574	0	1.37168254262476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55101338-4	6.47711497397657	0	1.30589435024073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77358833-4	5.85579662672297	0	1.32156175377327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-162653723-2	2.8799868581809	0	1.4325794316675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136065852-2	3.22983621522657	0	1.4473130025003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127015785-4	9.34698461773184	0	1.29793790118524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37318043-3	5.39055180401169	0	1.31230060566504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25091838-3	19.3309345704763	2.35720207512489	0.508603379988958	4.63465672441277	3.57530276202002e-06	0.000223143967800344	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58720693620383	5.50967781424006
Merged-chr13-20180740-11	33.9709542601125	-0.821301338234128	0.356334421748064	-2.30486107461941	0.0211743552580677	0.195708545784115	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00349666809056	3.81953378745931
Merged-chr11-95333446-4	5.86613596742551	0	1.2993691630533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93423803-1	5.72713541874789	-1.1406727476004	0.644972221896012	-1.76856104631481	0.076967156240792	0.510868033693326	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90085580537033	3.0451916841249
Merged-chr10-60269832-4	8.36114279900698	0	1.28995700492962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41455185-4	7.94580019523188	0	1.29341404689924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33952260-4	5.7019342573705	0	1.3231558329099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101715849-4	8.3429812708288	0.203805154285511	0.78834548501967	0.258522637800641	0.796003580136934	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20619268545854	1.31734301959449
Merged-chr2-31084645-3	7.31400658138382	0	1.30401629610308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119917173-2	6.62767194217052	0	1.3259145038006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52377982-2	5.18733070704131	0	1.32925439117057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9128514-4	9.52793233349468	0	1.28689106555299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114926965-4	8.83912835658059	0	1.29207839143796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82039041-6	15.3172521497898	0	1.28286207048562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23180253-3	4.75416818992273	0	1.33999680147942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15262003-2	6.70205733376193	-4.0999473220712	0.921593424428633	-4.44875930469347	8.63677357994373e-06	0.000451141971506797	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64074115032489	0.683637474991079
Merged-chr15-62162141-4	5.9117757337427	0	1.31934090522025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38321599-4	7.25929199568153	0	1.31414460543242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126136893-4	8.81663133992145	0	1.29722522384697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92008809-3	8.87896793098109	-2.08282648294514	0.630367148329395	-3.30414820706483	0.000952654551573651	0.018358054947547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88955593878765	1.76901627090616
Merged-chr4-42987581-3	5.12814563191082	0	1.31798577776287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47221697-2	6.44485750058009	0	1.30035291204668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134727240-4	7.15538360305249	0	1.30469871372358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38442909-7	16.5568878512244	-0.350719201037632	0.504444180910173	-0.69525869126853	0.48689319699636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66078317197654	2.90535044852059
Merged-chr12-111386695-4	7.40436523130698	0	1.29247258704084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35288305-5	10.1669209050482	-2.15972640799509	0.58579600561237	-3.68682337759778	0.000227070840242893	0.00600735673138141	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25174752909577	2.20522870892236
Merged-chr15-12306299-1	1.64390069601878	0	1.46718015597274	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51850359-1	3.28453138283211	0	1.37106521094144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115858985-1	1.70655046334235	0	1.50270361830892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64036470-2	4.82609796684383	0	1.32696464270696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73744613-1	4.51938225984299	-0.20853207933702	0.880327185315823	-0.236880199561493	0.81274973133233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04213161308804	1.52696130946871
Merged-chr10-89741162-6	18.3380610610233	0.145439935809245	0.48708736364273	0.298591067363272	0.765252081906205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05022199063377	3.19365296885894
Merged-chr1-105865748-3	6.05762466215287	0	1.35035308492698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33159565-3	3.98495043353291	0	1.34783071189911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167106111-1	3.29500199598783	0	1.38167016779926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38424627-1	1.9207051306587	0	1.37447105967626	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15984375-3	10.5379069104987	0	1.30349302175712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60833995-1	3.17330021402804	-0.395714233946368	1.38065103322453	-0.286614230840195	0.774407716768892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12000521415173	0.773587911294612
Merged-chr17-83304622-1	1.99268633158275	0	1.57358434396411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102104679-2	3.41663301863773	0	1.36133799652463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150730431-3	8.55272397582339	0	1.29732039356663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99956598-2	3.51579392712774	0	1.33404452005693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125727111-1	5.34547150562184	0	1.31993371393157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133844377-1	3.11231379603425	3.6225334668085	1.17008728417628	3.0959514865241	0.00196182456051205	0.0319614529372277	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.36759862365701
Merged-chr6-93122862-2	4.95155200382816	0	1.31787883893277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-65475937-3	6.05995227715054	0	1.31962956392391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45036773-3	5.55111153795227	0	1.30959474179274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8115986-2	5.70719950293794	0	1.31853319714911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88600290-3	6.73281304228829	0	1.35473362145954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77395519-1	2.0726750961586	0	1.47883757765947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29641644-3	4.29182208869055	0	1.30860831949652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184085142-2	2.40424194136131	0	1.45800131950239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54762862-2	5.92053419259191	0	1.32015608110905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45545159-4	5.50226752046298	0	1.30453316048702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37185596-4	8.64975820727513	-1.72116413029097	1.08039492670723	-1.593087941959	0.111140463989181	0.671715201612746	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28114796174411	0.609949614787909
Merged-chr10-57463520-3	6.24442562001869	0	1.30948689206017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66190497-4	7.91123373403809	0	1.31010118888101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89265694-3	7.89908860019944	2.34696136673335	0.825698265466337	2.84239590282757	0.00447758507129617	0.0597737025677057	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0743140088861	2.49952550894788
Merged-chr11-120355194-3	6.84569336328644	0	1.30353806746874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91987741-2	4.37428615884543	0	1.33192404051091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41019939-5	18.884031194838	0.491357182296891	0.482508468645724	1.01833898102556	0.308516889431438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02894286337371	3.24342239095198
Merged-chr6-108701997-3	8.93330593165754	-2.12606333123912	0.649989607855347	-3.27091895861859	0.00107198625423464	0.0200370797740249	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07163611076225	1.88639437725876
Merged-chr11-17727811-4	16.8706396053398	1.15239092630043	0.443656542548077	2.59748435057859	0.00939093993570983	0.105621404653854	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22456003270818	4.89460763921674
Merged-chr11-8628927-2	7.18170588272438	0	1.3257223124592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-153716929-2	4.14624831997144	0	1.33746636807258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102347561-4	8.87398176727528	0	1.30137536011995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17505364-2	4.72368658354858	-3.57006636528511	0.980811162433395	-3.63991204629825	0.000272731183762878	0.00691038849715743	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22835661408039	0.73596151290311
Merged-chr2-158864050-2	3.37852998145257	0	1.34973587434256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80329822-3	3.75476610961145	0	1.34126889184488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64413468-3	5.70669664849537	-5.39595518237655	1.03521306095201	-5.21241026210998	1.8640274469719e-07	2.07507218994592e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14647866066716	0
Merged-chr10-94639458-1	2.89207553648198	0	1.34540530201449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122593527-4	7.45662404142319	0	1.29576736865839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33337297-4	6.87418180864903	0	1.30289019076727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73120168-3	5.25476662188115	0	1.32463965580305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76916748-5	14.6329321316294	-2.0606529188004	0.562436471329831	-3.66379675544185	0.000248503999615237	0.00644906368501084	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62084487940348	2.15820604725476
Merged-chr11-40855969-3	6.31020485894998	0	1.31234871831098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17000546-2	5.29393111624131	0	1.32558909928111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90603542-2	5.14725127798439	0	1.31757153968401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73173862-4	10.9615447177591	0	1.30036005630908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50994298-4	5.98761748011857	0	1.30630724397861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96621885-4	7.22634560847938	0	1.32521834164428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76014298-4	16.3561196808595	-1.36255119676781	0.99277373453878	-1.37246902225996	0.16991747598905	0.905789333883933	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23671024926668	1.03300427768847
Merged-chr5-135951189-4	5.22287900069141	0	1.31539434066437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9751698-4	6.77235866496767	0	1.31917548147012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122463933-5	19.2661740832951	-1.58384278475149	0.633839922389213	-2.49880565866112	0.01246126275976	0.130963522656304	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41268207742664	1.40000983364339
Merged-chr10-100882300-2	5.9292744295362	0	1.31284080605262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16968073-6	15.8024340765692	3.18004653478932	0.713225826912184	4.45868112846797	8.24654942430566e-06	0.0004337559953704	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01252277904269	4.35875519029332
Merged-chr11-6497835-4	14.3631279571878	1.03477128782679	0.597712774898784	1.73121828959071	0.0834128384901741	0.541119363047644	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12211757096493	3.22784306814375
Merged-chr1-157077220-7	33.1917624444593	0.892246364798742	0.262584408703803	3.39794113901561	0.000678950264300737	0.0139474014369682	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18773821768042	6.10854750637888
Merged-chr10-22165799-3	6.96522403453982	0	1.30275345298511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-54474295-3	8.41205324183721	0	1.31701341487027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102720937-1	3.18790284333667	0	1.32892580936277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110465071-1	2.77273381228768	0	1.3490108458942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133109442-7	26.5691026501465	0.49407974032516	0.272785679099455	1.81123782581351	0.0701040452842784	0.476147899713799	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06084172740662	5.57080254679726
Merged-chr2-12174919-4	5.06328134462769	0	1.31953842443318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80226017-5	27.4134698806573	0.323869831091559	0.326666333367667	0.991439270012071	0.321471132811343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57354047189607	5.94157182887612
Merged-chr11-8607318-4	7.39866958697767	0	1.28923075927012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33023940-8	34.4277105349418	-1.07752888606779	0.287408493016304	-3.74911984944949	0.000177456270305245	0.00498326490733414	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.23683773899435	5.11457674473557
Merged-chr13-21172394-8	24.9703382984908	1.81031977104994	0.311495042330955	5.81171294895451	6.18368075253752e-09	1.18846706604505e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9216340425112	5.65366647686232
Merged-chr13-105266903-6	17.8710551172926	0.0632903758694161	0.635428113406436	0.0996027316609046	0.92065972506099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39277163160322	1.67113172082159
Merged-chr2-129083771-7	16.0146989041492	-1.56713575313887	0.649102019243186	-2.41431347720356	0.0157648923954662	0.155591701929336	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19291099599867	2.68297728031423
Merged-chr6-136620944-5	15.6393711868356	0.832049189836453	0.410552412733801	2.02665765449039	0.0426974359070143	0.331169928401158	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31157974484877	5.18785679885367
Merged-chr11-97821944-3	6.61969414408732	-4.65172679231083	1.06178770868123	-4.38103281313024	1.18118079707932e-05	0.000578600125813032	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99615750757087	0.306240821987646
Merged-chr13-94382683-2	3.40405905527083	0	1.33726470861081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77203053-2	2.56571764813706	0	1.40641644594972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113985950-4	7.71484510453669	0	1.2904785992461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74963998-2	2.92517368131652	0	1.45391018645351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-49051084-1	2.3771112290681	0	1.43042002405839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39559540-2	4.08500199816061	0	1.35232751716791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92652090-1	2.20645080530688	0	1.48212195559835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15203017-1	3.35105902056147	0	1.31804948211131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52539440-1	2.79371776897556	0	1.48083867107825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133847308-2	8.66679346136857	2.01836203999558	0.688448093692861	2.93175630593879	0.00337051113783173	0.0484110163127101	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62910449076785	3.5007334381435
Merged-chr4-106529931-5	9.93488461164578	0.333426327519241	0.53056744137924	0.628433449765557	0.529720030232474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64062587090459	2.37125099301087
Merged-chr11-23416721-1	2.58982071614964	0	1.35299309710199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157043551-1	7.60575340021381	0.879442939507351	0.603261034002668	1.45781492577467	0.144891563057455	0.807925939035111	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85579783300534	3.55304467334937
Merged-chr5-62760391-4	5.9182672872332	0	1.31705183522297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121498160-5	14.0355503227432	-0.503104842098256	0.57598868126915	-0.873463070471628	0.38241072665425	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73483526909298	2.50224159696657
Merged-chr16-70297795-3	8.84367761005881	-1.48291058446319	0.791847111287966	-1.87272336202778	0.0611065955903292	0.429586377208667	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9345936363292	1.29948469469889
Merged-chr19-32787568-3	9.81662269125712	0.619518087582615	0.608432052716392	1.01822066213758	0.308573102269708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96531448621546	2.99221333465834
Merged-chr3-79193160-4	10.3966098096178	-2.47291514801483	0.700105929224606	-3.53220140665524	0.000412115346269112	0.0095058557773743	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02794325595485	1.31470332505763
Merged-chr11-57677507-5	19.1004456267977	0.362636229287582	0.34448023169318	1.05270548473903	0.292475994136505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92649033213909	5.2380714069999
Merged-chr18-61124849-5	21.4624549858992	-1.28302037908582	0.400595381681788	-3.2027837507747	0.00136106142275478	0.0240575299007886	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93254832491927	3.52459974952138
Merged-chr2-21215486-3	4.76073562585125	0	1.36329842327523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153543178-4	12.8978777426824	0	1.34020805741237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56808949-2	5.11061187702905	0	1.32121271952726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110681447-2	8.6945303584643	-2.27611760359612	0.59242095683884	-3.8420612527644	0.000122005377553994	0.00371162169536466	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77043445952846	2.25104685314663
Merged-chr18-6108003-6	13.400892384422	-1.05541188968004	0.513543855239804	-2.05515435324839	0.0398640984508631	0.315752651802436	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14648955294045	3.1142920681081
Merged-chr16-44002268-4	7.89614761358183	0	1.30405099335957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119009580-2	8.142144208151	-1.02744355660475	0.846363189956659	-1.21395113681322	0.224766383827227	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35401235585681	3.22189257198815
Merged-chr18-61095691-4	5.60367589218564	0	1.31787153298609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106648548-4	8.06452916989217	0	1.32087456054504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82866678-4	8.29704613839533	0	1.30843127289373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61137015-2	2.93771383257491	0	1.36361756917893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51839820-2	4.29914711706014	0	1.32858895546366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68435690-3	7.22983540258991	0	1.35342696704725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158498429-3	11.8428530631898	2.37807043552526	0.743329416025631	3.19921475493344	0.00137802477055273	0.0243045632001453	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.864507874037491	2.78469821888068
Merged-chr6-53448434-1	3.1203457338353	0	1.3333386736521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122087316-3	4.8821580024614	0	1.35189129510756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155121396-3	6.37808711144903	0	1.3071230556613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159911799-4	8.90301803223363	0	1.31618550215288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134824588-7	22.8772993732321	-2.13178120774504	0.735374780330375	-2.89890442909574	0.00374469018233514	0.0523375431348867	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69463128150483	1.00443616959195
Merged-chr4-129033740-3	15.3237738671024	0	1.31028982059674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83344000-4	10.0005348399132	0	1.29340741670727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157576131-3	4.37477403908441	-0.0621901139282318	1.09660940794696	-0.0567112715589977	0.954775195062076	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.976661988908764	0.581381506691384
Merged-chr4-140679894-7	17.8483641677675	-0.346332916387898	0.371623148571246	-0.93194656393021	0.35136414176915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48031018659035	4.05407097359353
Merged-chr12-55560284-4	8.026099158993	0	1.30001324691287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78039099-8	28.2631869484921	1.31584127220709	0.393640052500846	3.34275250662981	0.000829518471018665	0.0163978114094781	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70213609438625	5.08727835259673
Merged-chr16-36982573-4	8.62455868870004	0	1.30165017642454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61982089-2	4.3048399768879	0	1.33307311054006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129634599-1	4.27967142521664	0	1.39597365757649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139121204-2	8.76122960651818	-0.768449006549645	0.619185585514836	-1.2410641082846	0.214582067191221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87164201439944	2.73218740131907
Merged-chr15-36325275-3	6.39120092184953	0	1.32480795860504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99218481-5	11.373560981214	0	1.33084756945816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38992162-4	6.61924736634452	0	1.30528681533566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123431409-4	6.57822867991361	0	1.29932785308905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62347399-7	41.7982254620383	0.18934688963353	0.378960395740517	0.499648226468447	0.617322793757903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73102245802292	3.60151059565785
Merged-chr2-11712927-4	8.83122335436404	0	1.33934526383981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155197873-4	8.25992677216871	0	1.30821968059088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17873611-3	12.950111266126	1.34610322189754	0.55814477354126	2.41174563609532	0.015876353416304	0.156431874297618	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62254975383783	3.99702916999435
Merged-chr9-63614348-3	6.51283834929831	0	1.29097688075089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58201463-4	8.65099793486368	0	1.29270624369495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155385267-7	21.2287337014253	0.596901184618103	0.423778791880496	1.40852066232335	0.15897695303548	0.863837350162686	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17590709002201	3.07746572591535
Merged-chr13-30566982-3	4.68248401724796	0	1.3572779104519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114929268-3	5.51411445205767	0	1.33032685739983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121657108-3	7.47997861568897	0	1.32834063819806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72394587-3	8.38306596999777	0	1.29899916508914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108526860-4	6.15614757872922	1.30560117664839	1.30209985016613	1.0026889846288	0.3160109463459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr10-20036926-3	10.5167305990881	0	1.2948825315196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56474177-4	6.10531553587348	0	1.30918798705922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41589883-5	20.051798507742	-0.555194280131363	0.445482866178473	-1.24627527180571	0.212663352994636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22393378481342	3.52791960267273
Merged-chr14-48189541-3	10.9755840396043	-1.52984012654838	0.533162400711685	-2.8693698664915	0.00411290537585487	0.0561323965519241	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80424476626948	3.32798809057896
Merged-chr7-12803547-7	30.1744566494569	0.359302545891447	0.350288488317768	1.0257332395277	0.305017341966242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71125538272765	4.07857293250404
Merged-chr7-34266130-5	19.915005707263	-2.09736402296904	0.540414711683158	-3.88102688107186	0.000104016342053915	0.00326624309844072	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33969104864075	1.98859768019381
Merged-chr5-113975774-4	7.88123983865946	-3.83698726712658	1.10580205401384	-3.46986809546889	0.000520714017891241	0.0113270899511055	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39655744510416	0
Merged-chr6-127246034-4	7.46707005006987	0	1.29732120394519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83566176-7	18.6100179794673	0.307993805327909	0.532286853494863	0.578623731369088	0.562843088383326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48977635634341	3.6656351335145
Merged-chr2-153075922-13	64.3242028457289	-0.342413855745556	0.244788295426503	-1.39881629204925	0.161868079439947	0.875035698137227	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.63620848807016	6.24123513009656
Merged-chr11-4388725-1	1.66928417390966	-0.374781357743037	1.59643915068761	-0.234760816020838	0.814394382126244	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr17-47646893-1	3.03810289203645	0	1.3599145001552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145283594-3	8.93491159278593	0	1.35818253024955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37285555-1	3.21573756312965	0	1.43166838412746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8494813-1	3.8456191164644	0	1.34092490775753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51530642-1	4.87016025535512	0	1.31260624822824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22383817-2	2.57726961453256	0	1.49532337820789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80684428-2	8.25015883911009	0.291507000716558	0.808559632859696	0.360526285099793	0.71845360370244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30859151114659	1.66069583796294
Merged-chr15-53543119-2	3.34462132030446	0	1.6403646662868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50513617-3	8.86810305202917	1.42347939734346	0.608090825765428	2.3408993147556	0.0192373542664428	0.181922453240951	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87595302407503	3.41096496559176
Merged-chr5-44050357-3	9.90006508013939	3.34687615964444	1.07348976278798	3.11775321541232	0.0018223532687907	0.0302089032730586	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26501898168246
Merged-chr13-37643467-1	3.53179867561348	1.16012680307899	0.951951695295472	1.21868242770333	0.222964750030907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03996780660832	1.79135360541375
Merged-chr1-106163523-2	2.4466131020629	0	1.44610974656002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108297706-1	2.77770212657716	0	1.33256166184565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80967494-3	11.1311679540239	0	1.32190232430346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107845066-1	1.74743781491117	0	1.4074095245632	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54767706-2	5.46959588789859	-3.03274579801949	0.86843693787244	-3.49218885766113	0.000479079384377553	0.0106482726025631	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99908757112185	1.03956264035389
Merged-chr16-97062277-1	1.62394887366642	0	1.47990288103726	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90307534-3	22.2611218775305	-2.21837132841341	0.544369847937505	-4.07511793097711	4.59910340682714e-05	0.00170450806905767	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.46165173343339	3.27279760193937
Merged-chr18-88735830-1	2.41567234863752	0	1.41632491045038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5633951-2	3.24713817625781	0	1.49282036261718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126001990-1	1.61737901810984	0	1.58267246173473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80518882-1	1.96203142208574	0	1.48706970502474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72413503-1	1.99867959774507	0	1.48094931454337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56634556-3	7.37923847536202	0	1.30169279391945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-53668438-1	2.94676828112886	0	1.39636468007805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128763889-2	3.69706238862641	0	1.40230358982708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24380593-1	2.76008235831653	0.759661177362651	1.34783599927499	0.563615438207079	0.573015877877716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.306240821987646
Merged-chr7-27273952-2	5.07105141416985	0	1.30020831037625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29418981-1	4.34847872995775	0	1.33094664794607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-53436591-3	9.42645067937176	-0.341245848845388	0.45480610686024	-0.75031061302405	0.453067652128546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42078377544618	3.64463354496013
Merged-chr9-41105274-10	37.242130296591	-0.591483818549045	0.312050566415393	-1.89547426669843	0.058029597806993	0.414109653630639	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08803009031038	4.48043651814089
Merged-chr14-14606149-3	6.3873293862024	0	1.3229855428322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30043549-7	20.3087308583677	0.179068894604595	0.363632081421516	0.492445259242739	0.622404610823778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1033683998111	4.37849842434507
Merged-chr17-84106617-4	7.8953270542244	0	1.29587002254062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109446323-3	8.8086642882878	0	1.35040955820129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81464596-3	5.78569531626596	0	1.30634176595023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55803092-3	8.35701614583075	0	1.3042434818929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11658980-2	3.55696216967586	0	1.40317741545849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86504361-2	6.90989340778699	0	1.29952478218852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-26205714-4	7.15393359008948	0	1.30659638123033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154104385-3	5.32505178286	0	1.32127532851465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70386311-6	19.3221608411663	0.188342726005653	0.403696042834338	0.466545881112196	0.640824814378008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83298803289807	3.98681383078425
Merged-chr17-83335363-4	8.10703806236516	0	1.29996879926023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72884953-4	5.65580920538686	0	1.32530656474111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104152963-3	9.1792508716919	-1.42327712430833	0.48860068194152	-2.9129658981497	0.00358013696387397	0.0504706564672278	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82695225065623	3.5530183489702
Merged-chr5-64343113-1	10.8902640030471	2.90744676001174	0.674561513126984	4.31012843666998	1.63159756598212e-05	0.000750305239596534	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66436367543849	4.42271564533928
Merged-chr8-71759016-3	12.3398961080278	-0.128484973380365	0.437820584558323	-0.293464898435466	0.769166825944526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65661978358462	3.5059491946375
Merged-chr16-48833820-3	8.76210949823515	0	1.3346052768471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75787540-8	28.6493493708148	0.00637291383175576	0.338182892781683	0.0188445777943884	0.984965092189622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0960394392688	4.04585856367732
Merged-chr13-95887733-2	8.26729939265238	-2.20743519913297	0.704364729696608	-3.13393772581966	0.00172477455884552	0.02891860829561	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70124522022086	1.26501898168246
Merged-chr9-67846018-1	3.16554459678223	0	1.35036748314794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82913904-4	9.17927324167562	0.56827962200327	0.682162528852727	0.833056050379977	0.404813118703999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09675001643307	2.00071484268282
Merged-chr6-83685838-4	11.5499774258382	0	1.31507157587389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99309161-5	14.8399298742299	-0.127725637132141	0.41437583000203	-0.30823621428768	0.757902598038026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.026202860078	4.70925113069315
Merged-chr10-77543355-3	7.58947065740997	0	1.30736837506321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4031127-2	5.54814184272829	0	1.30306734959296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75829032-3	5.10480085233496	0	1.31350422679137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27347421-3	4.88560370111194	0	1.39127008698923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62865673-3	5.92909937820483	0	1.38057375066749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22632529-3	8.50874461952792	0	1.33049651334296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101759774-1	3.14902788241743	0	1.32724830908154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16877349-3	10.8616773107614	2.00175418680437	0.64945553180554	3.08220361329331	0.00205474236512067	0.0330712301948707	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18825721336784	3.0861950770416
Merged-chr14-76174506-3	5.42051167965355	0	1.29987475454034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88592853-4	5.93855275393616	0	1.29999586955392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127793723-2	5.51653661203638	1.61688286676275	0.897495517502735	1.80154979632845	0.0716162660057427	0.484054253042125	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918643588040654	1.43116362910629
Merged-chr14-61678312-4	5.68446574106081	0	1.30563249909618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123957018-2	4.25345342279079	0	1.34358127026936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53729239-4	12.953475659886	-2.76316209102963	0.575669123896234	-4.79991365930492	1.58734048834953e-06	0.000116940644364925	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76020200927121	1.52242786274935
Merged-chr9-86579834-4	8.59727520462325	0	1.32906398471685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163929710-7	22.3413177003265	-0.334137076564921	0.351933072801413	-0.949433578109511	0.342400139272767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77680410212495	4.51521462640712
Merged-chr7-84779697-5	14.1330247717814	-0.94684774851434	0.40116046130967	-2.3602718608488	0.0182615468011057	0.174691705060028	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82106458000881	3.76609107468503
Merged-chr9-111039823-3	5.29829719293303	0	1.30238042046436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191638905-4	6.26697081385797	2.50216618548185	1.27873982699409	1.95674376652806	0.0503776014458355	0.372774854951825	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr8-120570496-4	6.40578602632652	0	1.30438091933912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111979590-2	11.3714385584941	0.604159190220914	0.527357615522796	1.14563471245595	0.251946328068308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43104869337625	3.92689316007749
Merged-chr19-46484691-4	9.54399243682952	0	1.28674198489098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97849629-3	7.32529930793004	0	1.29707290880116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46086461-2	9.7357673195785	0.964495135455177	0.551115680331464	1.75007746989723	0.0801049468437129	0.525450497535562	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.554314457394	4.55041282378791
Merged-chr13-83650021-1	2.21538253580057	0	1.36320583290193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76525859-1	3.55709176605403	0	1.32826254362841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118790831-1	7.44579699706346	0.803447240528397	0.629362279667984	1.27660532968746	0.201741619299845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43007768532038	3.08531610990261
Merged-chr10-5256874-2	3.51887653996729	-0.867282887264639	1.05868506558932	-0.819207633558015	0.412667960392545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27947069890538	0.683637474991079
Merged-chr4-133942876-1	5.95164370423858	-4.15675794390694	1.13039950397601	-3.67724678689807	0.00023576492072261	0.00619971610041837	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87254350981721	0
Merged-chr10-88492871-3	5.01569205809396	0	1.31931568667088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109480577-2	5.40282979882028	0	1.35951386760795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107458474-2	2.52650874656012	0	1.47414085019264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60804945-2	2.49970163825485	0	1.41736462804315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53452743-5	13.6081217771028	0.109496775556101	0.383683429432604	0.28538312357671	0.775350635620337	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51816945035338	4.6711791530792
Merged-chrX-121497420-4	8.84239368199421	0.641557844933407	0.566620540811649	1.13225306660153	0.257528055637294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55075078128212	4.18425211518486
Merged-chr2-159900112-7	17.0486304388713	0.458731821380634	0.500170427164648	0.917151027862802	0.359063504806767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50390248294506	3.40142736182033
Merged-chr12-98779320-3	4.23605193838753	0	1.32786458544978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142991749-2	5.22827090857683	0	1.31409559284816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100106528-2	4.3393578727042	0	1.3443840958573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58897726-5	17.2371153606768	-0.0472164768823417	0.448354568897699	-0.105310573723885	0.916129373013718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51096346001566	2.87076088402335
Merged-chr3-100409046-2	5.73176886858126	2.4805149006346	1.1961741783785	2.07370711178293	0.0381065203387267	0.30504822712905	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr1-184851964-3	6.8171011374162	0	1.31490078586275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24931710-5	13.5930621400807	-2.10669327891361	0.737274381292065	-2.85740740810993	0.00427117228139175	0.0576303993185681	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17839455082688	1.08764913775046
Merged-chr1-161424152-1	4.23083666976986	-1.41662395713717	0.80139267732992	-1.76770264716802	0.0771106272224398	0.511508582527414	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94545234711105	1.17564474993106
Merged-chr9-7261735-3	9.27024798432256	0	1.34805235355788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104994032-4	6.72487209963361	0	1.3146990481177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20817101-3	4.34854064621941	0	1.33653244647558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-48590136-3	10.3786104119528	0.976104029123288	0.517967300295043	1.88448967447807	0.0594987701897711	0.421053350316307	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58931779463592	4.09578919811992
Merged-chr12-98272750-1	2.71490429669277	0	1.3400389684056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128787546-3	8.55795646178586	0	1.31656061866968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40777680-1	3.50246769286379	0	1.32633769855201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109444235-3	17.050208155262	-1.21354885533037	0.557204001865011	-2.17792559146832	0.0294115768843787	0.252453553538238	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11172627818269	3.41940553036517
Merged-chr18-69290107-5	19.7085259558771	-0.670942844232404	0.302497582931971	-2.21801059608232	0.026554109947965	0.232975949068168	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37428943640741	4.6452578010935
Merged-chr10-43919175-3	7.00474421567392	0	1.30111722819759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72374999-3	5.5256067356295	0	1.30315852845135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133931577-8	23.5305738290942	0.696866904230763	0.303666460235992	2.29484317658657	0.0217421132509386	0.200022544346872	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77817261737165	5.47968107755169
Merged-chr6-50944064-2	4.43352330840794	0	1.33645686577125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22913071-3	8.64795258071121	0	1.29428788450978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-64831861-4	6.8158514785993	0	1.32524882978336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-131801499-1	4.08025795195334	0	1.3379121879518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-46710204-1	2.9887478811474	0	1.34340922617165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130044299-3	6.93064827754208	2.73148346857188	0.765295113806159	3.56918974039567	0.000358087017681122	0.00852841033467675	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13759966774802	3.49690686312675
Merged-chr1-57394166-4	5.62776658975559	0	1.31299914630214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43845207-1	3.27112556330679	0	1.32970057565658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134813417-2	7.66874259968285	-0.338483858620826	0.590653872261462	-0.573066349882476	0.566599770204836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50678662261942	4.27665492560705
Merged-chr1-106815053-4	7.57021338408971	0	1.30126914906008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-60779868-4	7.10274358486037	0	1.29585582940266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61277781-4	6.21642129542189	0	1.30950412494264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45080007-3	7.45596393573701	0	1.3007509119382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35124960-3	7.10772414651954	0	1.29762661665606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103490160-3	9.5473780670567	1.1790832437678	0.670779075528364	1.75778178953936	0.0787846450086539	0.519658969691683	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.905830781009	4.03074215053003
Merged-chr3-106556683-3	10.734127669739	-0.854430529726316	0.521198161306568	-1.63935829624645	0.101138661621426	0.626303342708355	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64276576107576	2.69408465206399
Merged-chr7-83821906-4	9.97607311425673	-3.44918094542584	0.807713367583636	-4.27030315933045	1.95207442102322e-05	0.000862995719490571	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37367347466555	1.04220233489076
Merged-chr2-170328727-2	4.12809253687308	0	1.31777757568925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87639385-4	5.91931692972775	0	1.30560576525116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60999924-3	9.11561357083994	-0.216403653480824	0.656011069397862	-0.329878051721682	0.741492108256668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06984984233274	1.93871841517079
Merged-chrX-12091945-4	8.90133509605608	0	1.30686750168136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80652493-4	7.52977251461196	0	1.30410897667695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57395077-4	5.88986958132385	0	1.3064095224966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99130219-6	14.4641319395558	-0.902370192210369	0.538675134202536	-1.67516585584789	0.0939016947147453	0.591488349993228	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85300403642865	2.87837514422973
Merged-chr8-40497889-5	23.1218816939721	-1.28224088888736	0.382146470003636	-3.35536499624125	0.000792603324530868	0.0158438228341371	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5960769287495	4.32429523997835
Merged-chr5-97055832-3	6.87626185690848	0	1.30815798789802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19049785-4	11.2399809373521	0	1.29386852095085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5945209-6	21.3255306716045	1.56876747066887	0.443572358827764	3.53666642983499	0.000405211102115408	0.00938636110557727	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97363730908077	5.02392443259761
Merged-chr9-41950895-1	3.88893869706392	2.01376291353363	1.0468576694198	1.92362626970075	0.0544014458182921	0.393852966811668	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.35032549026822
Merged-chr9-120884531-1	0.925161878892141	0	1.73817807973136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157070601-3	6.27261048914446	0	1.29525442174026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120432186-2	4.9677623481762	0	1.34209477363668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113632556-1	2.66153631271326	0	1.38891131980986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-1293858-3	11.0365006097542	0	1.28570537568876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116323783-2	2.7025561947283	0	1.36503000896332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35736229-1	1.41243829641859	0	1.71985133281028	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117693236-2	4.69666599735738	-1.65066862733015	0.872664328054492	-1.89152756021337	0.0585539555565361	0.41662312497794	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80875447831909	1.11548603074465
Merged-chr13-73445696-2	2.83449998144084	0	1.35705426015053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117192032-2	4.8504201218294	0	1.37910885776585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-6359369-1	3.1327313568412	0	1.34946540654501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30622349-1	2.12681078992839	2.65788721496313	1.31807541662014	2.01649100002076	0.043748658389466	0.337361320641733	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr3-152557740-1	1.17045130924869	0	1.6474417955717	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54019091-2	2.14514137905491	0	1.42606842087852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40014032-2	3.20698230027048	0	1.43998618077115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26755773-3	10.8096445163525	1.76779625171474	0.595567074664992	2.96825719035782	0.00299493619405085	0.0443076976537123	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54327062862569	2.96757005996282
Merged-chr2-158317211-2	10.6085301871343	-1.32204516522842	0.461621099597318	-2.86391840923578	0.00418435777747497	0.0567933889043268	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4742286770564	3.11561005221855
Merged-chr13-95831899-1	4.02215200458305	2.16410426755279	1.02784361646892	2.10548008751313	0.0352495388604085	0.288648667465195	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784769569710081	2.08153858449613
Merged-chr18-20699502-1	3.06164624015522	0	1.36496237988448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82942252-2	6.16176266937101	2.39976312099782	1.1130461137396	2.15603207394088	0.0310811607538584	0.263632979109153	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.46928333126936
Merged-chr5-118494860-1	1.68052910178902	0	1.59726504074325	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100402797-2	3.25543247846729	0	1.4530209003657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34487561-7	41.2667908331483	0.0619961503913058	0.367658190592411	0.168624423384695	0.866092068570064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77872229025827	3.94416485382766
Merged-chr2-45194484-4	7.85499789521277	0	1.30295236105533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132807366-4	14.2448118159962	-1.15769060803808	0.423611522529482	-2.73290632210673	0.00627781847421268	0.0776504723667055	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04427591434418	4.03434507842822
Merged-chr3-61595780-3	6.58699066326268	0	1.30851083582371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60604319-3	11.5241985676237	0.612126738309457	0.55909162481647	1.09485943115388	0.273578224693464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11419635310876	3.78104178437266
Merged-chr2-26507559-5	10.1233331022327	0	1.28936498279486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93179717-5	13.416497245462	0.151801214478338	0.423367910604862	0.358556259640606	0.719927073475663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51254710536781	3.78881017335801
Merged-chr9-115313957-5	14.9477324599048	-1.05745448535361	0.525692216115466	-2.01154678143712	0.04426773419034	0.340094139327736	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61132306022908	2.78424187151255
Merged-chr14-44835278-2	4.94549409154515	0	1.34610049033378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-45011609-6	21.2530461152885	1.67724812651317	0.415088753208873	4.04069759430262	5.32924415797617e-05	0.00191245941003226	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83089955635425	4.41403578170605
Merged-chr2-6728374-3	5.93238344440544	0	1.29417596081747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116866365-5	14.4689317501064	0.250569039922512	0.485076051029575	0.51655619647822	0.605466000295729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97001472347942	4.36384115119267
Merged-chr6-86503701-4	5.6547812289669	0	1.29688776629796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45676868-8	24.7258191583905	0.147022433773932	0.335105139751863	0.43873523958122	0.660853389737463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88764946415298	4.9906598831878
Merged-chr17-74123189-2	4.94139431800908	0	1.36723655713569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46979424-11	32.1299329806763	0.140014034820216	0.31698403126403	0.441706903221231	0.658701313648495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24151187883215	4.2555690883142
Merged-chr13-35482537-4	8.24234643650846	0	1.34035227574512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35208568-9	45.46606614556	-0.0300274082198751	0.31346256871013	-0.0957926438982336	0.923685259811416	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11346729928184	5.18825562788919
Merged-chr1-43472105-3	8.60127791551512	0	1.30693125494764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62707082-3	6.35236832509176	0	1.307314415719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49501678-2	5.6243262001903	-3.30895692458125	1.14663131438	-2.88580721901045	0.00390411217068536	0.0540848238086932	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59847314931102	0
Merged-chr6-83616695-8	20.8686128586543	-0.0353420742842385	0.333860111301867	-0.1058589303958	0.915694279709118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6683201528659	4.50942818687582
Merged-chr15-95963243-4	7.53118173823675	0	1.30949406793436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83540537-4	9.85772262861138	2.56571437882207	0.786219681195106	3.26335557375263	0.00110101286002477	0.0204520815675809	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	2.56773781410272
Merged-chr18-12936955-2	4.3042868388244	0	1.37343478810546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60602188-4	6.04297517972029	0	1.29275766407121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37048025-3	8.55666152677387	0	1.29050008487631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45585064-3	7.60000277152254	0	1.28675615379646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89235504-3	3.37571501929733	0	1.43541751984324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138046581-3	10.2273596934567	-3.79823431109674	0.658987071528976	-5.76374632401226	8.22670388638216e-09	1.51006233752677e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31986422742339	1.31470332505763
Merged-chr8-77482233-3	6.03512731451923	0	1.34410144598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88043031-3	6.68020162698293	-0.325130384452662	0.978449422448549	-0.332291457272293	0.739669189889125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09472666526504	0.916190436775555
Merged-chr15-100133688-1	3.00608989837205	0	1.35875843233012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71834484-3	6.75572839340162	1.39375000169973	0.523152965038209	2.66413476524583	0.00771866335013774	0.0904075596483421	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35085541781428	4.05822047591128
Merged-chr2-45019212-3	4.18524343405445	0	1.34021918785106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65902993-2	4.37580818999689	0	1.33382216500304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120293110-2	9.15915560911125	1.33985476244663	0.568311084422385	2.35760800584846	0.0183931038768175	0.17559032373039	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38020008042199	3.82309291279604
Merged-chrY-90799345-2	4.6969218486858	0	1.31371810347384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113542643-4	6.1097243813033	0	1.3101882653854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12260914-4	6.22403103635574	0	1.30730731479422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59559169-4	7.60695642697417	0	1.30182582413688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81637012-4	7.97568502777629	0	1.32277052237671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160021713-3	12.0552614313046	0	1.30562537774564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62780614-4	5.57748018354741	0	1.30647333032773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120197776-6	13.7925244409039	-2.67516174516068	0.671055227986092	-3.98650011741824	6.70550946166856e-05	0.00231350697614675	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03159814382473	1.51348424539579
Merged-chr17-43030313-4	14.709960846144	-1.10165878483425	0.401433850723225	-2.7443096361941	0.00606383124546195	0.075420231532073	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80768551108061	3.84963837514038
Merged-chr8-83425458-2	4.73000817523405	0	1.32871218699627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147459941-2	5.41129699305961	0	1.32366581155849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87393571-2	3.73248045901499	0	1.32377373197756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34997906-4	18.7884925297218	-1.66553864449614	0.76726807897009	-2.17073887230107	0.0299509169997989	0.256375769225682	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.79106168088461	3.22834565288811
Merged-chr19-11330387-2	2.58091568347898	0	1.46155125456242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149290355-2	7.80363704957248	-0.340285153162929	0.682073378446782	-0.498898159517421	0.617851130706145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36396968222377	1.77338015316878
Merged-chr2-166012435-2	5.83611320907288	1.27846140006948	0.787625588726221	1.62318418594939	0.104550037370972	0.642641966140865	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3860856199241	1.99170652413272
Merged-chr1-144295141-4	5.97903805585143	0	1.29592030905559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49399520-2	4.60051428855352	0	1.307675893503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24645873-2	5.30903789479896	0	1.30092014238656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57712029-2	3.36755602778004	0	1.31476918296022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91509717-1	1.88453304846287	0	1.53851094731525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32441420-1	3.59452954802197	0	1.3332140538858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77236201-1	2.04963824022868	0	1.40779537570153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31076011-4	10.8212853503958	0.219479999578212	0.457012417580428	0.480249531818436	0.631049970303224	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47854455883482	3.69740045729455
Merged-chr1-156996218-1	3.52514787178073	-1.09804102817131	0.959403338321199	-1.14450407280499	0.252414649800332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38353036733316	1.60978507060531
Merged-chr17-44614200-3	4.99949153486872	0	1.34456363746571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67340476-4	7.32575206292499	0	1.29266889226314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94159003-5	13.9712052529126	0	1.291329215585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82362639-6	19.7048766978971	1.15215719166244	0.513064656059463	2.24563742221392	0.0247272414446922	0.220892183109345	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47218686755685	4.37414557269032
Merged-chr17-45678652-3	9.2166147024561	-0.181073185380005	0.60973132349238	-0.296972089842564	0.766487817485417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02277575766597	3.23765162036731
Merged-chr2-156730654-3	7.89966298252195	0	1.29334543150042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121736389-2	5.23629358152203	-2.62051089389059	0.985065275260015	-2.66024085885972	0.00780847894881477	0.091214312726001	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81567697027055	0.683637474991079
Merged-chr2-43902802-4	6.55709223365283	0	1.32590034771097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25119731-4	5.08383081897628	0	1.30990081978332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118494304-2	4.779468692672	0	1.31578780880714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45894348-2	6.8982641739852	0	1.32221717706728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103980239-2	6.21237463005174	0	1.30669036728555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117432601-7	19.7553844616002	-0.0368797200718607	0.342498766583109	-0.107678402581668	0.914250802129297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37998128648586	4.29119411506532
Merged-chr12-25316173-5	9.07652905810493	-1.52769763427356	0.826010175178934	-1.84949009126022	0.0643870772815809	0.446459884554561	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8608344997548	1.11779166918352
Merged-chr19-29442623-2	4.26542266035678	0	1.32699628958023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115329337-2	6.58313956981035	0	1.31336015581927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53794109-3	12.4890156391083	0	1.28888934585319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16044047-3	5.43875140146944	0	1.30730852349745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34139880-2	4.9341465409028	0	1.31024104175061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160011479-7	19.0032752469095	0.0688306489243834	0.435583626256077	0.158019367063899	0.874441537739154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81163806430185	3.90107687913203
Merged-chr7-101070572-4	9.59897898494267	2.33078152544862	0.713451924469651	3.26690761564799	0.00108729155879237	0.0202422091740303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.948462285078776	2.98814934133005
Merged-chr11-109394976-4	9.15071159029318	0.0419554741997074	0.686929796655234	0.0610768005755392	0.951298045108708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95878595362915	1.5268023559189
Merged-chr13-13968997-4	6.25869309634117	0	1.29956117773411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9715835-3	6.27084153417754	0	1.34829161513633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101343301-3	5.54624820784294	-1.28290764806147	0.756443822274927	-1.69597214001068	0.0898911563139436	0.572015532232054	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90282914078678	1.26501898168246
Merged-chr5-110417229-3	4.84821981684438	0	1.32595868979737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6531364-3	8.63294018520389	-0.347649049593572	0.639149042629825	-0.543924853838698	0.586493185171323	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26907955467085	2.08364730863447
Merged-chr2-68350851-3	6.62951875489847	0	1.32401954212327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95211984-4	6.15920156091079	0	1.31211866889937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109759942-3	6.89372277232341	0	1.31023112199736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95575220-6	24.2854768150288	-0.575202408066758	0.595333829056576	-0.966184651354819	0.333951791757058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61796800809637	2.09296523225154
Merged-chr13-101850268-3	6.59410328381469	0	1.33266982011953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27562801-3	13.7334353966405	-0.357321462597461	0.764613636564365	-0.467322900756795	0.640268874365288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8351618307037	1.26501898168246
Merged-chr1-64907936-3	4.53059299681158	0	1.36371008436721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16830059-4	14.360963690076	-1.52786002049606	0.42891058072038	-3.56218775934585	0.000367777196132013	0.00869177889997922	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12903389691943	3.64580268687092
Merged-chr15-97824131-4	9.53286508783899	0	1.29732440065786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148764266-3	12.0938914039793	-1.97620673459899	0.487064436105891	-4.05738253114697	4.9625763487518e-05	0.00180760598709886	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00479485181557	2.39530158927722
Merged-chr14-54392689-5	17.6244930788483	1.40855702737207	0.592474941738464	2.37741198511962	0.0174346031894482	0.168358442443872	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4752898538009	3.95763603157876
Merged-chr4-95157850-4	6.94278252955794	0	1.30660208504969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33027300-3	6.11302772286546	0	1.33098671896033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72941000-4	5.29076703163836	0	1.32020902550792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5770458-4	12.8850371684729	0	1.29243194831649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7801551-2	4.26610333466333	0	1.33435378485722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72528213-4	19.9148669159113	-0.231959768065364	0.368288419221749	-0.629831827336661	0.528804619707817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60228292290873	5.20889502261134
Merged-chr5-24025188-5	18.3026235175894	-0.973019440748284	0.429632267003616	-2.26477272653289	0.0235266299066134	0.212696618411395	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.68957797990252	4.65650399337611
Merged-chr16-90995281-6	13.2701978432214	0	1.29072064802081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67181052-2	4.33848926904166	0	1.32595825208257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120572345-7	16.8595213521531	1.07871833010747	0.348117386887416	3.09872006035807	0.00194358569927728	0.0317752191906362	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65421001749222	4.71483814987416
Merged-chr10-20534063-2	3.21007017034211	0	1.37656684076676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74794303-2	2.86174357415953	0	1.98870415003216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74906165-4	5.94974303882203	0	1.30502156317452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45840101-2	7.99187711005615	0	1.3240709742121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83610096-4	11.4574253713236	0.363254539213873	0.430360172253669	0.844070995955821	0.398629734082138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21688007128944	3.55373189562152
Merged-chr11-3197692-4	15.9591581063473	0	1.32072208311427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75566679-6	21.6940515508118	-0.324638302524168	0.487281863096393	-0.66622283140456	0.505268681619179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45733608818736	2.75521533196448
Merged-chr12-33118787-2	10.0837698875482	-0.847175398161722	0.713015048235754	-1.18815921242886	0.234770689631733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64635095874183	1.93994840877528
Merged-chr3-84429500-3	4.01743465107901	0	1.33312964581552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66132098-3	5.594848467477	0	1.32407381928346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84149021-3	5.63726302519933	0	1.35945409653046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128704712-2	4.39131901055102	0	1.34715603028339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4808836-4	8.4340404691357	0	1.29633337876216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62275013-4	6.96511896747267	0	1.29898336876491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110678183-3	7.73673110913524	0	1.29210601339081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80235475-3	5.96430158264164	0	1.32911680591165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88303708-8	28.9072800738717	1.8179347231162	0.283906408097182	6.40328879964526	1.52065158945604e-10	4.98156702381461e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78637314092078	5.60523633192845
Merged-chr3-146156983-7	25.8286395164346	0.139062429279856	0.401513147590801	0.34634589206922	0.729082783382628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75164344992859	3.91590863328423
Merged-chr14-30581391-4	14.2442482733839	0.160462689282907	0.627194374883661	0.255842041492594	0.798072809526971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37192848515059	2.61076849167644
Merged-chr9-44460798-3	5.25347605238442	0	1.31226973725685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109360896-1	2.76220246507938	0	1.37411513098882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67905512-6	15.8806836147791	-1.45919726040988	0.657729856703413	-2.21853584041855	0.0265183186706365	0.232834585657494	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29886389634622	1.29915063860089
Merged-chr12-84674001-2	4.30536248180247	0	1.38253785317186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139328484-1	3.01100608714481	0	1.41925613235826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30597395-1	4.04223557858337	-0.360010567463885	0.911313901471522	-0.395045622460676	0.692809218644046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74174203286576	1.76550025052025
Merged-chr2-22589068-1	1.65691825446782	0	1.53943028442574	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95870112-3	5.7884467994893	0	1.33501331662558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-49050235-1	1.48894943881565	0	1.52865408635768	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116275748-2	3.62813373041753	0	1.37132686669843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52420200-3	5.77893260011703	0	1.31656544338454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102010877-3	6.93542582376165	0	1.30751672831432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55645094-6	14.1840296776274	-1.11570717702464	0.575102959941873	-1.94001292766326	0.0523781187973223	0.383238220908054	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71526250553385	2.31528043526326
Merged-chr17-47216035-3	9.556570779592	0	1.3017064253962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5464913-1	2.15597973151013	0	1.47898954743312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99273223-1	1.656068286395	0	1.4779939246673	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69396419-1	7.04957533673904	0.245189224912992	0.602056808499021	0.40725264036839	0.683822442769094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03740701817953	3.34504896528964
Merged-chr1-74439683-4	10.3108294756596	0	1.28535662700866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86180567-1	1.63196215761489	0	1.43765140113414	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15717648-1	3.79508032194864	0	1.34446080222049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142458923-1	3.86835397265714	0	1.34396545343571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38854527-3	5.4382701399742	0	1.3499030623292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92336578-1	2.50203714891925	0	1.47418856881151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12852460-1	2.38859861822721	-4.12628367484589	1.44013647189951	-2.865203232721	0.00416741686730634	0.0566869322670692	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74229025886522	0
Merged-chr15-34027318-6	28.3680283080914	-0.153270613563893	0.449876540366698	-0.340694834718345	0.733333327588321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05666687964877	3.27192482389018
Merged-chr18-56875341-3	6.74035750807151	0	1.30392836566348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125699757-4	5.52774108092097	0	1.32532785903195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85090477-1	1.66132895957762	0	1.62215840436058	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120016440-1	5.3023836803651	-0.261490434646228	0.848848266699412	-0.308053211515627	0.758041842814271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97740626641916	0.95685815637649
Merged-chr14-79548472-1	2.57072496028794	0	1.364649711197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164449775-2	5.77361880909043	-1.35531461835117	1.16643655986413	-1.16192741636034	0.245264949540658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28170271898547	1.19664257419518
Merged-chr2-160047872-4	7.90362473773281	0	1.30409857013999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117677681-1	1.72830141536003	0	1.53610253734638	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50761777-4	9.59293896353776	-0.518047462683225	0.948184237125081	-0.546357387519917	0.584820295564496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6315600121946	0.73596151290311
Merged-chr11-99066149-1	2.10889455150896	0	1.37440502003466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89026858-5	11.1708520578254	-2.17955549405533	0.606813773039487	-3.59180294003231	0.00032839813905801	0.00802824721095576	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51871542538121	1.62354617165363
Merged-chr16-4268192-4	5.5292685329902	0	1.30129170886303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33865612-8	25.9484578212828	-0.396755396616295	0.315865316668526	-1.25609041474046	0.209083190983239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16885220303234	4.70947555576895
Merged-chr8-126628834-5	13.0246744235393	2.42063772281828	0.638870270228144	3.78893467989027	0.000151294684408971	0.00439791034136505	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23510696604465	4.15935917636843
Merged-chr10-41968378-4	8.50685088260557	0	1.28465696182053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35028496-4	5.45812220502618	0	1.31942253742754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149729008-6	12.7651376777305	-3.43151869508587	0.834171168309305	-4.11368652556149	3.89390129286808e-05	0.00149676984637504	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91092666252021	0.581381506691384
Merged-chr8-126759912-5	14.0045841453907	0.371216304193408	0.526886574773596	0.704546902438954	0.48109225202105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64884048886304	3.79884064380665
Merged-chr17-73302227-4	6.88361229150241	0	1.303034150918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97795575-3	10.2698720240284	-2.33846073167967	0.687913706554999	-3.39935185096172	0.0006754576158894	0.0139018750765067	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19317320306121	1.84016081186083
Merged-chr12-79812650-2	5.13739743405406	0	1.32218738888638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36705963-2	7.72132977941471	1.29669822227422	0.692880595898506	1.87145985895695	0.0612813687097213	0.430727887135043	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71609996860323	2.73893482823591
Merged-chr6-87842884-2	3.27976839890125	0	1.33930072861435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19619188-3	5.25595288742714	0	1.32098873292106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152528405-4	5.96492728616675	0	1.29874595161632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85517458-4	12.2552184662321	-2.81740300504472	0.970510245735927	-2.90301211906146	0.0036959233457241	0.0517603529682141	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6854445602977	0.469435083901436
Merged-chr2-60948365-4	8.37927309922309	0	1.30593809207474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65151959-2	4.7304982555977	0	1.31947423642055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126035542-3	7.62505689761195	1.45902755127609	0.838479735441348	1.74008683764802	0.0818437711009889	0.533866546019498	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04790655584953	2.09093093088911
Merged-chr16-23985607-4	11.3290025814454	0	1.32374947129042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-14049254-1	1.93587805276874	0	1.38730890582789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113749255-2	3.531405608374	0	1.35220577815642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5415588-4	7.33957316895304	0	1.29867297666232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119873232-5	10.3416622873252	0	1.29227008927915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119848009-2	5.43999927989187	0	1.30930276772102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14328396-6	18.6499131564533	-0.562403098570501	0.414258047851754	-1.35761538366483	0.174585758971591	0.924248550892714	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54390533999426	3.96510336608248
Merged-chr2-130733685-7	24.9549420369785	0.789821050387858	0.354881807385178	2.22558901006332	0.0260417229965388	0.229590182262794	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52265106778553	5.18854740149925
Merged-chr18-80704948-8	25.1080223633179	1.19933574899145	0.342859709860628	3.49803641109939	0.000468697139742468	0.0104908902862713	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77155687738778	4.88217334385858
Merged-chr14-121416896-4	6.85175722068746	0	1.3010979473578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64092725-8	28.2878038908547	-2.26237215274846	0.40651060905235	-5.565345903327	2.61632899003007e-08	4.07513807544129e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4069295184451	3.08602414835365
Merged-chr1-135467122-3	5.67661849159464	0	1.33877242046379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-28304041-3	4.66585067626622	0	1.41837148089989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87525335-5	14.8247527401121	0.854253835498393	0.480549454374616	1.7776606085426	0.0754596129798114	0.50346986622205	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47748226527039	3.57058717652133
Merged-chr11-53926518-3	10.0038438804116	0	1.28806685260044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52845531-3	5.30777396273162	0	1.34623222643993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-40440700-2	8.86622386993078	3.54102347455413	1.07961559808094	3.27989284412751	0.00103846521063754	0.0196069192875819	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.68807364458303
Merged-chr1-92708406-2	5.648262213853	0	1.30382966832715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46302097-2	3.68936159029094	0	1.39629945128591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3743408-2	4.44053709690103	0	1.32414372435585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66928802-4	6.07452363706358	0	1.31670809927294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59381169-3	10.001186965214	-1.83528608334727	0.564912055806237	-3.24879963966775	0.00115893077522523	0.021278867782486	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72995781611507	2.54053031365018
Merged-chr18-58688466-2	5.92887275229037	-3.48709906376771	0.96558492750821	-3.61138514534037	0.000304565962397072	0.00756161374574432	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63760551656876	0.805218875278971
Merged-chr4-99126992-4	6.83266152201291	0	1.306205868917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51710926-3	6.98403738292649	0	1.31032514401503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57686308-2	5.14691355229023	0	1.30898057038354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11844224-4	11.4896343350694	-0.345316114937973	0.421200198550531	-0.819838442921688	0.412308212554585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32994007924062	3.81688587254719
Merged-chr6-37589751-3	5.58928883987798	0	1.30726766228818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86634590-4	7.68239265826588	0	1.30198141080996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36231107-4	6.22571622256183	0	1.3020000099593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88953236-5	27.7007177044923	-0.831960200505597	0.520838904038918	-1.59734650014437	0.110188490914715	0.667328196204292	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52599525464919	2.93511414188456
Merged-chr10-95703190-6	16.9590840024139	0	1.29282160483922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4164982-2	2.45516119674263	0	1.4808384933432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42026357-3	5.54136114635116	0	1.29742277330121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53830823-2	2.45119361006208	0	1.48246260154709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84180959-1	2.95941362190033	0	1.32558394911686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96433910-1	3.30101684762258	0	1.32663327227448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16162721-2	3.45818311445924	0	1.47344139659373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60505914-3	5.17432067022136	0	1.3508233033617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49633541-1	2.75772625734028	0	1.35805311424045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51960240-2	3.65494991255709	0	1.39714978488835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161354484-6	37.4495098687395	-2.42625291583825	0.414235176533605	-5.85718706011783	4.70772771236662e-09	9.4655746182249e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.87448672340521	3.48179635057438
Merged-chr14-22739781-1	2.21611586959074	0	1.40907815988703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92477190-2	6.04457931763762	0	1.32376589108696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-56440613-4	5.67887544267583	0	1.31679146649134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13538879-4	9.54796153486669	0	1.30309855489248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76216637-4	7.43460068931417	0	1.30246106804323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93180116-5	17.0664508383948	-1.32559613892419	0.530077090054946	-2.50076104739177	0.0123926762839677	0.130452571626498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12082027763678	2.23016711638071
Merged-chr16-22545217-2	4.93061233942993	0	1.32965843019807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114874450-5	10.8173778760356	0	1.28216991217451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52762733-3	7.44600673293008	0	1.30354321914258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120986621-3	4.18015187446604	0	1.34618998472922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45961919-3	7.94283645822905	0	1.31312701418408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102032997-4	9.62194571525333	0	1.29421074940152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171564478-4	6.87305546510945	0	1.29786611641415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67087578-2	3.82253604690945	0	1.33981892283087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56166318-3	4.42364916442323	0	1.39534779991415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79793993-3	11.9189875926702	-2.79248202552338	0.533655868348027	-5.23273928227891	1.67016235772263e-07	1.90468463224683e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44486442167874	2.75361422657935
Merged-chr2-145685094-3	4.19964538243281	0	1.34652764303287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99297958-1	3.01746521865113	0	1.3243812038284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-59817514-3	7.44991367214481	0	1.29887166499928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92751938-3	11.7447917635324	-1.4891057608409	0.740659040410773	-2.01051452773065	0.0443767601909084	0.340751355305192	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53349752741914	1.54311005189624
Merged-chr2-143975426-4	7.99360492313013	0	1.31917267177538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151616712-4	6.6995734361395	0	1.30329158818518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33194395-4	7.43739836827439	0	1.29463974780027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120305980-1	6.58174960865553	-3.182801716778	1.073610119983	-2.96457872139691	0.00303097683444793	0.0446588979084181	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61671153991065	0.306240821987646
Merged-chr14-51140596-4	12.4012676812239	-0.223808033530386	0.459791469741268	-0.486759864545392	0.626428515894406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48084950406382	3.08921834981692
Merged-chr2-128067563-3	7.64431256080768	0	1.32077116996443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60559970-5	14.0603225064798	-0.739132807689529	0.471345806643007	-1.56813277485959	0.116850149076003	0.696496382515781	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55551625130933	3.5900026770234
Merged-chr9-21297345-4	6.73812992979461	0	1.29973786541475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43536728-4	7.40593506907568	0	1.29251427470018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115694327-5	14.9227668475906	0.388693815923639	0.397905930391851	0.9768485117597	0.328644155219733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50225182319651	3.94538648511894
Merged-chr10-118796094-4	7.27278751671963	0	1.30068828002043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85325306-4	13.0167641925094	0	1.30816301330825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86859491-4	12.8543430756986	0	1.32597900666487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42832402-5	26.2609027644925	-2.67046102295174	0.396751273806087	-6.73081902758284	1.68710699296747e-11	7.98881837409073e-09	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12670717849354	3.39269219802373
Merged-chr8-127829873-8	25.6343583792306	0.789689490552637	0.35662532083223	2.21433937643519	0.0268054418221829	0.234802734760371	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59467340338686	4.43598126045224
Merged-chr5-72230807-4	6.33495780784398	0	1.31486216147915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76942040-3	9.53104551211552	-0.90202691512768	0.80559107440433	-1.11970817923306	0.262838138411767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10419275962748	1.29358708977899
Merged-chr2-58865336-4	8.66240352344197	0	1.29460203963646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22530911-2	4.55383598118249	0	1.36235061103244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22008635-4	5.95276714734297	0	1.30126606947986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148548112-8	24.0000485829283	1.07353343385285	0.422085000540768	2.5434057890649	0.0109777656362288	0.119183705301642	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20944853146401	4.16974948308854
Merged-chr5-52168656-4	5.88062692183752	0	1.30270107797265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5018906-4	8.05192586522208	0	1.29896309765769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104032699-4	6.66174774505644	0	1.29772400623877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107700436-4	6.53499312134284	0	1.29699999830768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64360372-2	9.06558638450483	-1.6816602650439	0.756690216309915	-2.22238933290918	0.0262570056017005	0.230989537971017	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65162422020468	1.82780813874672
Merged-chr4-141681984-6	16.8402459966663	0.0972372921023838	0.42021188501289	0.231400623281755	0.817003580993161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14142023681016	3.43063748661984
Merged-chr8-56063369-2	7.08871047523193	0	1.30292737907848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29355074-2	4.09311106924516	0	1.30186579756445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83327616-5	12.3299856394548	-2.37927640747693	0.644081073831558	-3.69406353352834	0.000220698621099783	0.00589365430910764	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23316097990238	1.38268966767817
Merged-chr5-105531390-4	14.3907272690053	1.39276068985425	0.341781106880863	4.07500783927103	4.6012797016156e-05	0.00170450806905767	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06157333031233	5.39664509317893
Merged-chr14-99970382-3	5.79610244929217	0	1.31793672156526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27585092-4	10.831422087242	1.37707270157463	0.856615767107074	1.60757337706405	0.107928646880689	0.657286058251041	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	1.75733238011489
Merged-chr3-136235764-6	15.0984770649097	-1.21225745940552	0.453939562205195	-2.6705261236022	0.00757324782931958	0.089103610488786	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47982064358163	3.08269754656065
Merged-chr8-84501676-10	42.1308143964151	-0.446614438529153	0.275057501521977	-1.62371299113058	0.104437077108978	0.642128833342424	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45785367316902	5.00873139945244
Merged-chr10-24160566-4	10.1368224320583	0	1.29168354566239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15126382-1	1.08526498750206	0	1.59117621515821	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106354351-2	4.11895229537874	0	1.32303457412108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98982184-1	3.75772920791042	3.58796368763311	1.21924604662548	2.94277245972095	0.00325287407003608	0.0471522424535443	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	3.55930082799915
Merged-chr10-17275394-3	9.22255147471131	0.958133804688082	0.780463680246818	1.22764688343355	0.219579554001224	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57555983171486	1.77777167463237
Merged-chr2-52298151-4	8.29576435620246	0	1.30559903027963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-13027426-1	2.5889401867827	0	1.37232826807868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106214309-1	2.52359767689536	0	1.34013740382904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-27411329-1	2.04281096527862	0	1.42394033903661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-139485766-1	4.05763706669585	0	1.3570747302335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37696458-2	3.77851871576712	0	1.36639889040414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-96105754-1	3.13932774258423	0	1.35583460861949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134539666-5	17.4836202421478	2.94634158271557	0.686495166299574	4.29186063843287	1.77182144102285e-05	0.000800878184203154	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.930068803098547	3.51343199975953
Merged-chr17-34280814-1	1.65048536280841	0	1.66955139209092	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140806507-1	3.01617149962414	0	1.34392534400923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87790294-1	4.61231628504355	-0.957175683151438	0.682583531902333	-1.40228358642616	0.160830579791566	0.871301199391451	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5212547451258	2.86019136253373
Merged-chr18-65305134-2	5.25658128404294	0	1.36771613967123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29839264-1	2.35392787398813	0	1.37501317921362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118507908-1	1.86876664258552	0	1.48543886526709	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102860336-1	2.30293863226608	0	1.4137544498486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86874230-1	1.99644548437739	0	1.42662952956086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84233914-2	8.87225901150041	2.39371714306079	0.539233256591556	4.43911259886168	9.03305516082108e-06	0.000466251202637452	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24828722720144	4.59043134716054
Merged-chr12-112605932-1	2.81667088852905	0	1.37452442947395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72197254-2	4.89567695415317	1.0545828446936	1.02395641014618	1.02990990069884	0.30305230263143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708390020836555	0.905469781553611
Merged-chr10-40489274-3	5.12441646339195	0	1.31856071945249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22021693-2	3.70604683155306	0	1.37878166676508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67048394-2	3.48304379289703	0	1.37214622998512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34577676-1	5.38517434930415	0	1.31908439028707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64511067-2	15.0544272908636	-4.81515818706676	0.746490900150388	-6.45039100422617	1.11561943616244e-10	3.80550790295928e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.20555793966785	0.793480537552656
Merged-chr9-21446437-2	3.27803284764566	0	1.34169489105273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87840199-3	5.60069012529318	-2.99917062878507	1.08962081835126	-2.75249020418241	0.00591439158172037	0.0739961386749185	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81738173320684	0
Merged-chr9-16312172-4	14.9402422630667	0	1.30429362506876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116782846-7	19.1773611949192	-0.171487631220744	0.426553914331838	-0.402030377541759	0.687661670065088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56754199950204	4.37537143725575
Merged-chr4-108348675-3	5.52718100845128	0	1.30991132172328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-156067744-3	7.52687519258284	2.48006866348335	0.965702733163509	2.56814916051753	0.0102243150624747	0.112819671069313	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	2.08364730863447
Merged-chr18-12938417-4	6.47425976017843	0	1.29888466506549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23843976-4	15.2040610381206	0.278749007602148	0.686953619786164	0.405775585968842	0.684907498709184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86725063250819	2.01259914296816
Merged-chr17-5520154-4	4.85293572583983	0	1.30361051178951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41765956-4	7.81494487570118	0	1.30275545393285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61676105-3	5.68121640410807	0	1.30830108607585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-139878451-1	4.95349708426124	-0.123909260791505	0.967739807957058	-0.128039850973045	0.89811743605842	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32137547774656	0.666688015277142
Merged-chr6-114883608-3	6.02346996878034	0	1.31564728179211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33619037-3	11.4113422072439	-0.568450191182084	0.714919727923634	-0.795124499967364	0.426541084352706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81315107224294	1.486851288245
Merged-chr12-102429975-6	25.4622312901982	0.485059942166362	0.354539302104124	1.3681415270116	0.171267780282305	0.911893128846047	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57324826047049	5.050605985652
Merged-chr17-43580712-8	25.3124913145713	0.466721246773648	0.356579965265614	1.30888241695237	0.190574183506327	0.983669873254697	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89749185153813	4.36006254326523
Merged-chr9-90126829-4	6.4169489671618	3.44913275101632	1.10152667792476	3.13122942924484	0.00174076108979017	0.029144702580945	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr17-81668151-4	8.27607357424207	0	1.2959301045369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60961201-8	15.0019240869114	0.0430083238214513	0.48539796265465	0.08860425286138	0.929396428087248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56649823737914	2.82843036934329
Merged-chr10-39450552-4	7.14769246651881	0	1.30998508237978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67116123-8	27.2136841800373	-0.0900655656250564	0.303997249445758	-0.296270988600266	0.767023139660491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.30828431508034	5.16225913399309
Merged-chr14-21299971-4	8.80394006870029	0	1.3295889283149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134540165-4	8.9564305891759	0	1.32245891078549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16581858-4	5.7413513030664	0	1.29445160942786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91737086-2	5.36238981546164	0	1.32825756090213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-135474362-3	7.99773689350371	0	1.32661331247913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38485657-2	4.37642696715072	0	1.30373824654473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53794503-1	4.41114354541683	0	1.32607486452677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30778922-4	10.8743387117549	0	1.28662620612769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43685529-4	8.72002321113822	0	1.29464835904604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50098698-6	27.8808853648117	-0.240236251398572	0.510841376097414	-0.470275632788132	0.638158104297916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26043977234843	3.60992921786274
Merged-chr7-98531726-4	14.1695599143436	-0.142774661418898	0.665523645987128	-0.214529810142403	0.830133922917192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7528877451908	2.21627226133353
Merged-chr12-55774531-3	4.24137691875725	0	1.33551422594405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176933419-3	6.64181936523102	0	1.32177890106504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3955273-3	5.62612716589146	0	1.33286415449273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120087921-1	2.94573782860728	0	1.48948190682087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-103885-1	2.32482441020326	0	2.43325260384677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97360205-3	4.91530044805256	0	1.35798731190549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167923734-4	7.21876430542921	0	1.30314507551898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146807823-6	22.6805362921965	0.05396636993707	0.456790398173795	0.118142522594219	0.905954731201096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9510471816127	3.80890245807824
Merged-chr14-25850620-3	4.13408308036702	0	1.34298129459422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79050846-1	3.7295993339046	0	1.3108695085605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37295480-3	10.7695212469837	-2.10586548670212	0.472438599488671	-4.45743740875817	8.29452446335406e-06	0.000435091737655479	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34577044129142	2.68797209055381
Merged-chr15-6326180-4	15.0785750301393	0	1.32771119426938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167180211-6	9.73887895044715	0	1.29988540213115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72377143-1	4.16501086469481	0	1.34306292630854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105616324-4	7.94447403217256	-0.275734208245124	0.969135732652431	-0.284515572953302	0.776015301460678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51924200961348	1.31470332505763
Merged-chr4-89212419-3	4.50888078015352	0	1.31143635923596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160234009-5	14.7649419755108	0.472950011294205	0.323405247350226	1.46240673325264	0.14362978541105	0.803289280851632	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18981802500221	4.61258139128996
Merged-chr13-19842921-5	15.1201939110384	-0.644180771805779	0.497214600313004	-1.29557895403767	0.195120583774812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27053115703266	3.55632924095453
Merged-chr4-137370588-7	20.3700556748167	-0.0741622177237276	0.349321614346832	-0.212303546868686	0.831870228502046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47088197335681	4.43702623150248
Merged-chr1-45917381-5	9.51174616584555	0	1.29439483346681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80664512-4	14.6203307527713	0	1.32453345598463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88698981-4	6.50377363880266	0	1.30045269182365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127321268-2	6.81458976972357	-1.52176385926904	0.746764374131938	-2.03780993307023	0.0415689446101946	0.324574531544721	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54953230314863	1.05916644618774
Merged-chr14-122010519-1	2.52735519185716	1.82986814260388	1.41611346044192	1.2921762229651	0.196296123909873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr10-98893773-3	6.82719375028305	0	1.31391257902079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12927537-1	4.18231435939308	0	1.32840637538979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62706583-2	2.70353044170972	0	1.46969535673559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75262927-2	5.11497365495149	0	1.32712355799229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72291843-2	5.2676142948992	0	1.34822280964096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40818666-2	5.28137867472081	0	1.33983876634762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101700529-2	3.92499576552239	0	1.34091745896107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160085500-6	20.4627428457355	0.148334521079539	0.420267305067332	0.352952797638575	0.724123827955613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02898132567951	4.91111724827974
Merged-chr8-4140266-6	17.9380167357218	0.705268280560605	0.368171783340309	1.91559568786593	0.0554165788706297	0.399917367518517	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69949554183526	4.2176053709841
Merged-chr19-16373261-4	10.9927819370056	0	1.28670443997329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-12289960-3	6.98201597452187	0	1.32494325216357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53429962-6	23.881453364277	-1.21436240252499	0.400268920545914	-3.03386633383566	0.00241441378657076	0.0375023254806876	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39900865708483	4.19464560618517
Merged-chr2-163764015-2	2.95188068744898	0	1.49544159775322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35799619-2	5.00256017986649	0	1.31720116657104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53877482-1	2.70625782317933	0	1.37987089965838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39507636-3	7.22556955198144	0	1.32158263671476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44425907-4	12.8522475588403	-1.54543461973581	0.693437985755816	-2.2286558444752	0.0258368123079755	0.228338157570594	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43636676628223	1.51144536133504
Merged-chr4-138065664-2	3.30903448441794	0	1.36821772168501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167839434-2	4.21177026037591	0	1.3146670607029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52917026-3	4.39451871192899	0	1.37565716522182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160700448-3	5.12123814634946	0	1.34459807195301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-114260595-4	8.87677026375457	0.510471475839815	0.654287535719667	0.780194406849482	0.43527645402041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34292477325476	3.07215202916989
Merged-chr11-115076796-3	9.18141256548515	0	1.31881332605784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92821195-3	4.67244495870649	0	1.34515498657649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140138229-1	3.02857499296263	0	1.35033245451967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20026668-1	3.13148567604804	0	1.3338647680402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119124975-6	23.2384271968016	0.555988712041408	0.424023064854691	1.31122280395747	0.189782500180119	0.981196692482492	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75735133436148	4.38024933941244
Merged-chr9-78538192-3	10.7627779371472	0	1.29656306567929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63997252-2	3.7142700077449	0	1.34982182871813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3127418-6	23.0362981538205	0	1.30122953159656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143050377-4	7.35833233771611	0	1.31327729786791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141031928-3	5.48200109290585	0	1.31217518042321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45052455-4	4.81170123323496	0	1.34217145156316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12439298-4	5.35298169469874	0	1.32317087721305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97824900-3	4.66008619119774	0	1.31566151380925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54808827-2	6.91256958490508	-1.4107617169824	0.872230407816792	-1.61741863656595	0.105787945562074	0.647430532585744	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6452246939617	1.60308582214967
Merged-chr12-102246047-4	9.61929685735684	0	1.29495770046921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-91506789-4	13.1896901322751	0.00523340527948784	0.411089636018011	0.0127305697370063	0.989842749317238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98116947313535	3.82264110660392
Merged-chr17-88132141-4	8.19220082418587	0	1.30249361642288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109021632-4	5.89441589973615	0	1.32942557541674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39855897-3	6.38472419479245	2.48714310973866	1.22038227301444	2.03800330825456	0.0415496020237395	0.324539839091953	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-75330321-3	6.09869394063055	0	1.38190965494905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17680425-3	5.826348004489	0	1.31916442455714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132180555-4	7.93840198907415	0	1.32162508771793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30023582-8	29.1194744077586	0.258475251007503	0.36512731739904	0.707904445081607	0.479004599141393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13617631613167	4.39950369218237
Merged-chr11-77468017-3	6.11943486377707	0	1.29887546722814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120536146-3	8.34349283306499	-5.22323163316438	1.10180483839059	-4.74061417337209	2.1307134197597e-06	0.000147181394426657	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00338998526377	0
Merged-chr2-73060034-2	3.39124509425239	0	1.34814621066859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88026255-1	2.86812443750242	0	1.88653255485456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-53448443-3	4.96794165224336	0	1.30622108070505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38845725-1	3.39544339414672	0	1.34944289420881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43695864-3	10.2968444639597	0	1.33752452150696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80843922-1	3.15292821812725	-3.39578745400043	1.26705330184364	-2.68006677308631	0.00736074755095006	0.0872949926432637	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1415579095723	0
Merged-chr8-56691866-1	2.23466903822224	1.03696346167419	1.31546868439216	0.788284414503825	0.430530361994022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	0.733321818366247
Merged-chr16-50538018-1	1.49904429610199	0	1.53640809125237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155122070-1	1.55330617467922	0	1.42979597638412	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-143369946-1	2.13364398364745	-2.00779586752974	1.45379548522354	-1.38107174491673	0.167256902211714	0.895059334364643	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57766471638787	0.61242769162773
Merged-chr10-44448688-1	2.03799825192553	0	1.48230981084502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46515288-1	2.34234843134782	0	1.49657589717606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59722746-1	2.99719687470017	0	1.33142283900783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130918898-2	5.37269714907906	0	1.33885472391416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92149484-3	3.60651806735399	0	1.36044506722308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-66973487-1	2.11092293780558	0	1.36973165814026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19952402-3	3.71296591067193	0	1.36045942088054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96384327-3	7.64586204108113	-0.311229957794811	0.579105184548051	-0.537432518477112	0.590968886180967	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13872110560638	3.91755615249513
Merged-chr7-101039506-1	1.60799258844049	0	1.51520733231271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100450851-3	6.67366045286706	-0.0817286041777131	0.740335256242641	-0.110394045790151	0.912096875040034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54561870233341	2.59366994739539
Merged-chr1-60623069-2	3.35137340812871	0	1.42506560838595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11320443-1	1.57289531982864	0	1.45702410661761	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134214990-3	4.40271945985523	-2.7049004198784	1.24726318487085	-2.16866853178104	0.0301078581047637	0.257382011474867	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37814551419591	0
Merged-chr3-109055248-2	3.94894589911964	0	1.48107210421329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102460255-1	2.82023368709429	0	1.41549946580167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64179165-1	2.80056708109035	2.32613391591691	1.31136559600744	1.77382563870748	0.0760919958350855	0.506396533235512	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-64600838-4	8.08789276308871	0	1.29762814112643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174067964-2	2.02414605075658	0	1.44903315255158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34726372-3	3.73909466843682	0	1.31774983656331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115489529-1	11.8210704155022	0	1.30085610451213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102747830-3	5.30427916911574	0	1.31401084910704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30788340-3	4.43708007784928	0	1.31920331979384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80772755-3	4.16332356841721	0	1.36353421052926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45000936-2	5.31605606152648	0	1.33133063887602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31850520-5	11.0634401237029	-1.38362934632405	0.581250147954459	-2.38043697914458	0.0172921185823916	0.167303935576689	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98402074700637	2.27643187026249
Merged-chr2-153122026-4	11.2765995235668	0	1.30484729943876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44718415-3	5.61982133981194	0	1.3089134886605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37666585-4	8.35227601525162	0	1.30469181877634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90808854-2	4.51038824579721	0	1.31389231719739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38904681-4	15.2092258256753	0	1.29771442779003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52765966-6	14.4413233221686	-1.29533329077648	0.497903645946505	-2.60157422288821	0.00927969822227967	0.104730770299324	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84691601271608	2.16523349939429
Merged-chr4-48076865-3	5.56406869751515	0	1.30789024245576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66791971-4	7.39569008065134	3.38043552585008	1.06940158959603	3.16105339541066	0.00157199678788291	0.0269192091459635	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.62581156516825
Merged-chr19-18639163-3	9.34957226174148	1.50211568927705	0.603768176411479	2.48790139653423	0.0128499354586638	0.133944485654649	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36493180324332	3.9095490331521
Merged-chr4-133707154-6	13.8415842106356	-0.43525950557568	0.687132961924863	-0.633442913808689	0.526444448585918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9707908708741	1.67709642602482
Merged-chr5-105062617-3	7.61140299600113	0	1.30529369778638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116638517-3	12.9665895924689	-1.03209838893378	0.473562881185819	-2.17943261589542	0.0292995453833336	0.251624141492879	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08120775695581	3.25767122431232
Merged-chrX-159510780-4	6.36495347653329	0	1.29741506850031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62231240-3	6.08612244181906	0	1.32716282447524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83609347-2	6.6099773628173	2.25580009816315	0.991120798297589	2.27600924331106	0.022845456388918	0.208006018279258	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.92713101668536
Merged-chr12-105781572-7	18.1559536948392	-0.024475898210821	0.352356098493277	-0.069463529410966	0.944620661818025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34273539066545	4.32164297608085
Merged-chr4-62847445-4	9.97694383950753	0	1.30397513526077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101995638-2	4.56367295860414	0	1.30934617923125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94206073-4	9.25926551812914	0	1.2883027019999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38962899-3	4.10222547260207	0	1.31668291261636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56759326-4	5.5881510182386	0	1.31158268620635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12557285-1	2.61430335418704	0	1.36552969574197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49049405-4	12.4478917553173	0	1.30546721135684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71698452-1	5.96495838211515	2.69727490881946	0.967718743481737	2.78725086910582	0.00531573097727386	0.0683034834236985	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.68348383313306	2.77284030825146
Merged-chr10-68075585-4	12.2184778828859	-1.08566882733407	0.4787662825058	-2.2676384428156	0.0233512525815819	0.211574760265787	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10570177320977	2.59947893829995
Merged-chr7-114531394-4	11.2284598292701	-3.10957504717705	0.640871256700684	-4.85210565252322	1.22157512926247e-06	9.46916351088791e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61175623840184	1.26501898168246
Merged-chr8-11486227-4	6.36372325163014	0	1.30214517226463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133157360-7	19.8247167071412	-0.0263998186815689	0.395102210399323	-0.0668176942236973	0.946726836935149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43248184435221	3.98310724185932
Merged-chr13-81025409-3	19.7068326447878	0	1.30061838170845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109031797-3	4.60580453885039	0	1.34051001185657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115819572-3	3.71182676328631	0	1.34016917167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82844027-3	4.21084336539513	0	1.33098369510241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140748547-3	13.3598780806547	0	1.30627688263951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10979376-2	6.00065782055216	0	1.31402244920737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6895766-2	5.96523283746313	0	1.32890955958496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66847741-4	6.68475496383118	0	1.30756649915691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45738126-2	5.35118426553986	-2.38050208601213	1.15714768269	-2.05721544589557	0.039665506428684	0.314599124054956	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07331870676871	0
Merged-chr2-52982712-2	4.27759570252143	0	1.30505983781378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34685080-5	16.2885837595291	-0.852308122970382	0.475518184108342	-1.79237756084674	0.0730725067300009	0.49150756817073	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15343758099362	3.61798959629449
Merged-chr2-102820682-4	15.8969772839509	-0.512537974691451	0.443087073840622	-1.15674323389495	0.247377280358521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07063694786945	3.70882412948813
Merged-chr15-99116527-4	10.6981312230322	0	1.28720118753419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102377205-4	10.0511444144835	0	1.28870698345291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151187156-3	6.04216866701318	0	1.32367075892752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105020491-4	7.88690668102475	0	1.31168455174424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171453067-9	34.7532658597457	-0.619246674120351	0.322916487161793	-1.91766818586158	0.0551530981878884	0.398323867615579	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1134226154942	4.44466844650732
Merged-chr14-52119092-12	54.5522287675017	1.13139570821683	0.239134814370806	4.73120449313781	2.23191543046218e-06	0.000152082112324277	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10870201820397	6.24224260897471
Merged-chr2-129912477-4	10.6343273329148	-0.656536024226422	0.412032760936105	-1.59340733667591	0.111068840912019	0.671388848810708	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56289923558302	3.96383647379347
Merged-chr15-97212728-3	4.59002670254836	0	1.35630197093009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59860946-4	6.26983557532975	0.940888946234473	0.917392284008479	1.02561244806129	0.305074297559404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.832882082720823	1.42539729206526
Merged-chr18-65692363-8	20.9045630732048	-0.387128971698246	0.338794433934611	-1.1426662687527	0.253177179804385	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79725225635638	4.34499084699816
Merged-chr2-35827028-3	7.19890333215024	0	1.310642862503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173487878-1	6.64885602874868	0.609713519943739	0.828994634605579	0.735485483852172	0.462043877408825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65019207869327	1.93871841517079
Merged-chr1-120020646-8	29.6204592325624	0.537475986389884	0.355284674154831	1.51280374721611	0.130329516715637	0.751350465251086	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02707285499172	4.50291988166715
Merged-chr5-3509663-4	7.76286696611192	0	1.30785286722008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30695372-4	12.5750713326908	0	1.33060562998115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105546763-2	2.40913580814715	0	1.48758397433149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53170450-2	2.61431205210153	0	1.40742893230366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73967837-1	4.02595014024178	0	1.36908174180336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-9052253-2	4.6540815626347	0	1.31496790048969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172477972-1	3.81238171229092	0	1.33677766337891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-7954189-2	3.73820253933423	1.43250776318224	1.22579347406325	1.16863712647594	0.24254986339924	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.733321818366247
Merged-chr1-33877920-2	3.67683307730693	0	1.32461008807683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110711577-2	2.96255910793015	0	1.40489535271261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70568844-2	7.81583443366265	1.23326001433566	0.582266124440042	2.1180349715891	0.0341721060375857	0.282309569593743	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4962158794538	3.58734547919981
Merged-chr17-79488038-1	4.59059132585845	2.26192114135095	1.22189854003798	1.85115299448728	0.0641475459315036	0.445224167439197	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.53823966306787
Merged-chr11-48813293-1	2.08067990104036	0	1.38630972822446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125637030-2	9.59215430416603	-0.818270031038292	0.720128061769231	-1.13628405068391	0.255837703630769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07666317666798	2.10380936944073
Merged-chr12-33057444-7	25.548762400878	-1.07132260921853	0.285982707681327	-3.74610974874856	0.000179598043418364	0.00502432149496287	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67641598969213	4.54078835560095
Merged-chr19-11740380-1	5.50983584745617	-0.0174689209947387	0.836053544853761	-0.0208945002413623	0.983329813839253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55860611454479	1.46402698790757
Merged-chr9-41168824-1	2.70254818385956	0	1.38823798335822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53817991-2	3.62705738676934	0	1.40405575669765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102221923-1	4.18255655244312	0	1.32326320183397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58030089-5	15.5108788685186	0.0680850572848371	0.357560078205566	0.190415713148194	0.848983385617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51936602631065	4.61263090149842
Merged-chr5-103715142-4	9.59703688655487	0	1.30286816198022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38372660-3	4.89948847544228	0	1.34431728338962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44196525-3	5.86074950069151	0	1.2980415984223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35564202-3	6.42918992228962	-4.49559464106591	1.07394452838982	-4.18605851813054	2.83840200358881e-05	0.00115996383568802	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41153028814503	0
Merged-chr19-57354887-3	6.12785443153456	0	1.3044492494142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70627197-4	15.5456554029887	-1.93917804655666	0.48811503207148	-3.97278903361593	7.10359599456769e-05	0.00242271181555856	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08977329869846	3.12134360384903
Merged-chr12-73369987-2	7.75118524259653	-0.53263984907258	0.779737216938553	-0.68310173928065	0.494542556473774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30381814288467	1.97271257483112
Merged-chr1-77227347-4	12.3237917937276	-1.69510270022445	0.553814945431172	-3.06077456776602	0.00220765243083664	0.0349554775249457	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4714954976402	2.8441881967244
Merged-chr7-122945370-4	6.68313276936383	0	1.30493519166855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84354553-4	4.49621345312856	0	1.33173771775495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81199567-2	3.94875305665703	0	1.32973571409453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45090243-6	17.6687154696425	-0.829454156741472	0.441459216339221	-1.87889192487515	0.0602592516790069	0.425008209413533	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08750280732916	3.05514898542474
Merged-chr4-84862135-3	6.47091349740388	0	1.30140089464587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11219456-3	7.99831500859287	0	1.30667850512815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124470781-4	7.23423388668829	0	1.33208719768908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107939595-4	7.22586786862508	0	1.30256503837116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24698143-1	6.75558207651285	0.95714090772068	0.754048291967744	1.26933635141981	0.204321126501682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51886169799349	2.61076849167644
Merged-chr2-60418280-4	5.1745307737982	0	1.32701024164265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180604779-3	3.08159231309115	0	1.34737871813176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94161816-3	3.94486834450407	0	1.34104640130307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8051635-3	6.57058087912224	0	1.32127710876855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8109181-3	7.5105790371997	0	1.3607051437695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108309561-3	3.65314719179402	0	1.38630245034574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99496215-1	7.1869281542644	0.513627917972777	0.669022568965384	0.767728835765708	0.44264830102804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67517223180288	3.28679704799357
Merged-chr15-73644106-3	7.78480242915276	0	1.28638122371586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107676557-3	6.63633497792704	0	1.30080366407105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59040150-3	7.19135626769075	0	1.29026149810387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35359588-4	18.8414989023729	-0.326686705680714	0.391224794827162	-0.83503579016519	0.40369755737362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31355591582612	5.03285223359924
Merged-chrX-113172921-5	11.5421812573431	-0.396315933577543	0.555382597166014	-0.713590839179784	0.475480223856694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04224761416372	3.80488283552628
Merged-chr6-83028746-8	24.8301135483243	-0.37075668445694	0.328079823111649	-1.13008072529583	0.258442210724474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48784964012091	4.94855882585292
Merged-chr12-45081784-2	6.0545323629928	-0.961804326074994	0.647162859235533	-1.48618591495058	0.137229952073201	0.778625375373395	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27206472388986	2.10822668382129
Merged-chr16-97431463-4	7.41786566506809	0	1.31900868971509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105171230-4	11.6483483856074	0	1.30299947053744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5804544-2	5.53811316476449	0	1.3243156218691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167943050-4	9.37869343867462	0	1.29145272264295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49504158-4	9.41255640103022	0	1.29218786462807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148440024-4	10.2216913169891	0	1.3171274768823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84799482-4	5.39438529710662	0	1.29713821698986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36379465-3	5.92674313959256	0	1.36399089722351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11093602-6	7.69064822225111	0	1.30315616514888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70546079-3	5.59517321073505	0	1.31684172536075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87755084-4	6.42421831689727	0	1.29527030723575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-129782067-4	7.8319380670629	0	1.29816902844692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-56434735-2	5.12370066946229	0	1.31146463302918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73324491-4	5.96194736913621	0	1.32450687572077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6369978-4	5.99810547615725	0	1.309420661204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165739253-3	5.5595649219317	0	1.30606424484578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59499477-3	7.95151907036511	-2.2294224729685	0.891188208754577	-2.50162923057979	0.0123623315500923	0.130316005399634	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90161391055422	1.41959898789419
Merged-chr15-78863287-1	4.6402681524497	0	1.3530844496618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97293370-3	12.1514515717426	-0.455080983194427	0.471911899740595	-0.9643346214507	0.33487818854273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41682831171776	3.55375942962588
Merged-chr3-9598212-4	5.93831394149549	0	1.31196944911307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100960877-3	5.71114303848416	0	1.30507635130006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84705643-3	6.34159461623262	0	1.30046752992698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53227893-7	41.3019633584341	0.0493070757598734	0.458093244162765	0.107635457165472	0.914284869619346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42222327770853	3.37126433462253
Merged-chr8-22934626-5	15.210765019177	-1.70464009945274	0.535726239810627	-3.18192384986651	0.00146300279477984	0.0254869049927175	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17942036890451	2.10209846903774
Merged-chr14-47506911-6	14.4016878363205	-1.28528845935184	0.680159173849848	-1.88968775070228	0.0587997333073674	0.417871383654511	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03413438617889	1.4944959016211
Merged-chr1-119495140-4	9.65697893583886	0	1.30130828685012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16696775-6	19.406458498921	-0.661489447388353	0.35186750467809	-1.87993900713715	0.0601163909413611	0.424321641220343	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37979207804701	4.78585182105195
Merged-chr9-115487314-7	19.6834320589677	0.920378723752983	0.465829872005377	1.97578296082815	0.0481793640818713	0.361254013229371	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51774132942831	3.81724152351451
Merged-chr13-49381432-3	6.68444839806926	0	1.31524994592967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32147695-4	11.700579692782	0.0902412757435796	0.528405937631459	0.170780207633698	0.86439659244802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98560982012312	4.00545899478118
Merged-chr11-3190326-5	18.4490025486932	0	1.3359816735135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68472646-3	8.22485177945448	0	1.30909079387074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-123887906-1	1.59764570616231	0	1.42284035459818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36360266-3	6.37199324084687	0	1.36040566481371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62174713-1	4.47921887813068	0	1.33776982469445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-4908791-1	3.28028499307567	0	1.323473691316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101192965-1	1.66695752721949	0	1.49786589770201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86421575-1	2.65225906930875	0	1.41183975130901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123153045-3	4.96773111556667	0	1.31281510544224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62894681-3	9.12725032351043	0	1.30086265087292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85301491-1	5.74833239155514	-2.79714894589731	1.23395103312961	-2.26682329427857	0.0234010225225607	0.211912862771515	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65298203902895	0
Merged-chr1-16231780-1	3.30654328769168	0	1.32259022021655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56079803-3	5.38562117453487	0	1.34146135220715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88392608-1	1.72194932908532	0	1.6632615214494	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44118021-1	3.94998069953051	0	1.36976363729495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62908213-1	1.36465425568383	0	1.6001170272165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66437547-3	9.119138817948	0	1.29015830140649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132008251-4	6.40888099682427	1.30532627989086	1.29846218752619	1.00528632441561	0.314758998260215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr10-121489304-2	11.0863304363091	0.604642571819151	0.695110241287786	0.869851335665791	0.384381652864032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64104807953668	2.85463309029571
Merged-chr13-5866385-4	12.1864482660257	0	1.34240384431724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46896154-2	3.09245839026738	0	1.36695003538458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-52429624-1	1.94208944544612	0	1.39971917016826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137560828-3	5.73727078280052	0	1.32912348162788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58072589-1	5.83664923802273	0.52511461923429	0.856115046994865	0.613369220734465	0.539632232973414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85478903279406	1.9450324219075
Merged-chr16-25052602-1	2.65022170859741	0	1.3464677703018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93023675-1	4.36674895962651	-0.898020867223997	1.2526919822202	-0.716872846613416	0.473452557829649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43431041881338	1.22548804685604
Merged-chr4-134653051-3	9.32053978114233	0	1.30026890448976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121429716-1	4.04615700600835	-1.40941457115352	0.986739564105758	-1.42835518349851	0.153189651784899	0.842336838230902	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59065124869713	1.73531645649947
Merged-chr12-30654132-1	3.52298791989996	3.32743664342468	1.23221803918448	2.70036352139989	0.00692637485758802	0.0835229546860946	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.58148496924487
Merged-chr6-119472886-4	5.00230168354019	0	1.37842791099177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13746543-1	1.7923425488151	0	1.51629492144853	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39976661-1	4.31894316399601	2.50178095766403	0.805749777432327	3.10491051655817	0.001903365978826	0.0312820304960674	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89676881988169	4.34927108076938
Merged-chr1-155065951-3	6.83448447752821	0	1.30590324693238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105468672-3	9.54332207930039	-2.49908837729531	0.723480129241276	-3.45425987015861	0.000551805377828306	0.0118612744143317	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08448412067854	1.65117231954624
Merged-chr17-27851012-10	47.9952207939532	1.22719102806689	0.376460985219792	3.25980931955115	0.00111487138881617	0.0206322248013541	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11802139708305	4.42522107181038
Merged-chr10-8683157-3	4.56709754222431	0	1.32767366960533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87967887-4	10.0425845360371	0.201207303364949	0.595381770680105	0.337946697855915	0.735403355839694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58842617678585	2.30492589888769
Merged-chr4-3724896-4	7.43498953296725	0	1.30346353924597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119806292-4	9.20595583230767	0	1.30418922910338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43843664-2	6.56927251579905	0	1.31925829843407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115924537-2	7.15120343126874	-0.0684291649787571	0.592089171814781	-0.115572397260734	0.907991440076097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70793901719999	3.59066150707529
Merged-chr3-95707731-5	13.2601484075541	-0.178186035100824	0.590191415303236	-0.301912278763448	0.762718935189264	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68988080749333	1.55698213282952
Merged-chr15-101298170-4	6.05303214676601	0	1.29758273716431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-67001301-4	5.17474628405486	0	1.30798735975271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80170465-5	15.500038786471	-0.750126607508761	0.495068460353589	-1.51519773037653	0.129722337685943	0.749035599401401	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44492486844039	3.40971363916967
Merged-chr15-63922359-2	3.74719717901753	0	1.38057113556987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151025334-4	9.5155776856979	0	1.29908121415407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37592280-4	7.19885461494817	0	1.30675615023292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57431499-4	10.4822377342805	2.75903477021246	0.799120257058375	3.45259020259189	0.000555231803019352	0.0119217482237512	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18620867247137	3.31666001085375
Merged-chr4-135240490-4	7.77148671448919	0	1.30531234502532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6369184-8	20.0325798892443	0.116532445222208	0.36417583244905	0.319989507372134	0.748976284619235	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08152351710451	4.1413785250021
Merged-chr15-63545833-5	21.5099106226108	2.20134126203737	0.421696876300074	5.2201981701921	1.78731776128604e-07	2.0102248955077e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2924874449187	5.5210645503526
Merged-chr13-83074738-6	18.8607613089725	0.403118451497969	0.392799778857324	1.0262695479887	0.304764547012535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42073949558243	4.7796325324264
Merged-chr15-36903527-1	3.61850585736685	0	1.33876532675953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141381581-2	5.35661788762804	0	1.32659235802781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80072093-5	32.7331031754758	2.40111853811575	0.540943316289297	4.43876181812668	9.04778747895984e-06	0.000466643031255019	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77680043222446	4.53413956843275
Merged-chr17-36849665-3	5.97275671492191	0	1.30263178189293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67260212-7	17.8464924413338	-1.79870823950772	0.522528057751059	-3.44231895842931	0.000576749772866941	0.0122763161751671	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31248407453025	2.21627226133353
Merged-chr10-123085465-7	17.5907026813513	-0.266306299264073	0.492005159134095	-0.541267290230775	0.5883233626723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80127391686043	2.94566139986352
Merged-chr5-104955455-8	26.0977369909016	-1.77765434993764	0.493103292283862	-3.60503443751965	0.000312111538532654	0.00770795185070098	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31675700162047	3.56552969900033
Merged-chr6-83599035-5	8.66928066578602	0	1.28368996249099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117374150-12	47.4242840966531	-1.07902804793998	0.29754369194234	-3.62645244097153	0.000287341712397158	0.00722734085385092	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.2149909508687	5.14435291624332
Merged-chr7-141369049-3	6.47522916115599	0	1.30510553618515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75575475-3	11.1598575592956	0	1.28461431962162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106787541-4	6.2613071150722	0	1.31526468345728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85061806-4	12.7843238877541	-1.94165461730288	0.758871145436784	-2.55860909849896	0.0105091838722442	0.115294020903429	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03861254993845	2.03280651306513
Merged-chr8-120704430-3	4.3623914061079	0	1.33108458830869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33776909-3	5.12726291615505	0	1.35323438665691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166522730-2	5.11298611620501	0	1.34946487412859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38928887-1	2.52156116288934	0	1.40185193471009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8704998-3	8.25827783866239	0	1.31630108879998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124056520-4	9.74393765881425	0	1.29549199365806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24501646-3	6.88674912612952	0	1.30370885154873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66792346-1	2.65600201210607	0	1.33186377762225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69071734-2	6.69989270222892	-1.16853006042609	0.709138108501323	-1.64781732418194	0.0993901629096418	0.618017849985104	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73582111980035	2.28083073713509
Merged-chr14-57357202-4	5.53780748255079	0	1.32285805704463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61511532-3	5.73695330819061	0	1.31840805191217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90061199-6	17.406282915781	0.356106261650791	0.44825612757741	0.794425864461372	0.426947551862996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65506855194985	4.03294832782307
Merged-chrX-106035886-4	5.86931894961858	0	1.29735571530431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102028173-3	6.43627960829687	0	1.33379818465086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33203775-3	5.97935690476964	0	1.30145720937068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90930082-1	3.44403403593591	0	1.39409679616279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78791522-2	9.11160408904247	-2.25394736245033	0.8454616609665	-2.6659368088598	0.00767741223108831	0.0900535235420385	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18343296037207	1.22237730641564
Merged-chr11-3148291-2	4.70573939039345	0	1.4064983473124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125137249-6	17.8693744109276	0.737825194156476	0.458107132223083	1.61059530022157	0.107267958850233	0.654362587661253	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5865284455479	3.35333803983128
Merged-chr14-51062987-4	7.5947727095536	0	1.30407701935118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108464988-1	2.18976990443212	0	1.34373960224623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13293885-2	1.73514647895085	0	1.6634989183898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-19675732-4	27.7964095123347	-0.971389638500481	0.799162085097991	-1.21551016572736	0.224171573942257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12835217089888	1.81609453980796
Merged-chr13-83715183-3	6.82205472374588	-1.85580314559675	1.11578823272188	-1.66322165010617	0.0962680754173247	0.602285162881494	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2683195048739	0.306240821987646
Merged-chr8-71579237-4	6.90229435181725	-1.36348641085661	0.746271938366519	-1.82706375619735	0.0676901838876035	0.464094298218376	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23873466349239	2.12216108640681
Merged-chr3-19451196-3	8.71425952428893	-0.440794770367146	0.689919835539053	-0.638907229015587	0.522883284953275	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4197016481772	2.37360508838824
Merged-chr12-79060973-4	8.38200678951833	0	1.30667480438975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74371875-1	2.95617931019329	0	1.38706540179121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32489954-3	5.4609346559076	0	1.31031909806463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50552176-6	18.3840659705022	0	1.28427146427098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103793582-2	2.72307012434244	0	1.36297038023769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26765068-2	5.51723440061291	0	1.30935906187319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140771819-4	8.33166015265956	0	1.3002949022094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129001557-3	5.8001822380447	0	1.31057295508157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41212846-6	15.091108742135	-1.70117000691692	0.478345334260011	-3.55636375036163	0.000376023353524023	0.00882634101537688	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.352255996458	2.37441905672497
Merged-chr2-160252138-4	7.88529392217914	0	1.32216431783343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58383469-4	5.44442780424114	0	1.31165158481305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43549474-3	8.1945143508299	0	1.30647817760739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6472967-2	5.02737367297812	-3.95239367105325	1.16076023450586	-3.40500437003322	0.00066162995005624	0.0136775927606375	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09613337013247	0.61242769162773
Merged-chr2-172406346-3	6.04954235037794	0	1.29611677061596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136815550-3	10.186071656574	-4.70684659589763	1.03411130967678	-4.55158603513273	5.32430169214056e-06	0.000304773510696942	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2099570518322	0.306240821987646
Merged-chr2-90528030-3	13.3961370000424	-0.395512689214723	0.475290518089604	-0.832149336377377	0.405324656815725	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61454938704921	3.26211881241837
Merged-chr13-47288654-5	16.8644335802996	-0.241809404651416	0.471243585314687	-0.513130389859716	0.607860114792975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50264926493415	3.78463369424345
Merged-chr14-73123117-2	4.26300721712076	0	1.30833641519396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191110848-2	9.21721972578018	0.41523721135886	0.599600972821759	0.692522577814923	0.488609212172832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18541333923152	3.88530714754549
Merged-chr4-133847941-2	4.68417016991257	1.27809480398597	1.37544561684281	0.929222346805469	0.352773868650976	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr5-12161404-4	5.72471513076484	0	1.33687659608478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12137187-3	6.7619392228772	0	1.29920871108105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47672617-1	2.64111782058124	0	1.42289422404917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32602889-3	9.49106103794145	0	1.29456870943931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17393164-1	2.14178322330806	0	1.39093238405709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86893250-4	6.51561737445305	0	1.29885846829901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95665215-3	6.19561926318631	0	1.33494322881361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3525926-3	8.93238186866076	0.329212671891779	0.958379938079402	0.343509561094864	0.731215149230995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00967833035899	1.03956264035389
Merged-chr8-122938752-3	5.40621573854849	0	1.33749516932995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62643110-4	5.51317666570625	0	1.3120905824982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136581604-4	6.64935293682853	0	1.32800831679793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110417445-3	5.44097789343367	0	1.30012654932074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7776509-1	3.09750593238062	0	1.33740029900133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157433618-4	9.03688819562216	-1.87603000855322	0.538851626074975	-3.48153353868174	0.000498551342890083	0.0109580679624942	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42749381843085	2.40665316105196
Merged-chr1-136633856-4	6.70472156294423	0	1.32062773893149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33205528-4	9.45118404521989	0	1.2987373401626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88230958-4	8.92783436115986	1.1091737450729	0.765488315601016	1.44897540885656	0.14734445016138	0.818391027645179	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37270811728485	1.78481374055866
Merged-chr1-167554181-1	3.25990922965527	0	1.40899464499595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41350109-4	11.7709331083235	0	1.28909487493149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139286124-6	13.2774001189894	0	1.28359147720746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59623503-3	4.41601040152563	0	1.32693332037338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53684162-3	4.55733723819753	0	1.34803582124127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59028116-2	4.11237290116938	0	1.37949716355004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84858350-2	3.973007954485	0	1.32023458857609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9505990-6	16.5730911598744	-1.57725652290275	0.55904695150924	-2.82133105036112	0.00478248213293462	0.0628839558036609	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06842133781607	2.00523365194985
Merged-chr3-69976369-2	3.34385309908807	0	1.3307901375127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33076750-4	16.3382539659606	-0.65249735517645	0.437904919671181	-1.49004344519903	0.136212812958979	0.774872680039823	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09366110124798	3.55683294381108
Merged-chr15-79409447-8	24.8173966698735	1.25228680232652	0.403383728363956	3.10445542115829	0.0019062965215045	0.0313065726298651	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59280896723341	4.00629504277429
Merged-chr17-78400289-2	2.77802768558662	0	1.36918484636764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102784636-1	3.35643150485763	0	1.32257842976963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103434356-1	1.69396203858258	0	1.54847996549405	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40938584-1	1.32342328898593	0	1.51903352266271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100439282-3	5.42482307773776	0	1.30913891271906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41038253-2	7.22247279564862	-0.933363113474937	0.600853944313535	-1.5533943353593	0.120328955381846	0.711860704075049	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7754097690891	2.78236656153271
Merged-chr11-119450272-1	3.1849744732459	-2.38272281895346	1.00821567795946	-2.36330665257645	0.018112675194291	0.173496170220776	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68177143038523	0.73596151290311
Merged-chr15-15102393-1	3.45458617980158	0	1.35780292007012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128715289-4	7.03314443827851	0	1.33503260484861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-14713529-2	5.12279517321577	0	1.34253259002383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76914023-2	8.93174022888763	-1.04339434697891	0.572655797985465	-1.82202703726995	0.0684508833074532	0.467739351731553	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3298360389199	2.76830674180609
Merged-chr7-127165803-4	6.96578686276917	0	1.29254975588922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21820376-4	27.5917501234533	0	1.32776488188442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65113945-7	12.6437661608959	0	1.28155070536829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31732168-1	6.41163554598407	-0.47709476607912	0.752370430882413	-0.634122164423132	0.52600109898073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10624425489673	1.88903407179563
Merged-chr4-102557272-1	1.97632377831493	0	1.41679712027436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83182174-3	5.78159218471187	0	1.3143138163723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75001673-1	3.88063907890793	1.60316814518608	1.10287918949662	1.45362081400575	0.146051463053487	0.813144662579294	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.674898740693665	1.51089815723126
Merged-chr11-71888680-1	2.17819461216638	0	1.43032114925949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191242260-3	3.47812470003194	0	1.3595167696006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88456895-2	3.03034288284951	0	1.35065750823333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17450188-1	2.69766879792933	0	1.38673066796912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41933083-2	5.44747169622979	0	1.32774306286112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79626404-1	2.1484984071643	0	1.58230286896514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59844659-1	2.05858136823174	0	1.36080307995737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55426021-1	2.25861602706709	0.0482119904373861	1.11982697608313	0.0430530711146281	0.965659228409843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12573429929988	1.82709613805758
Merged-chr11-101003254-3	4.97097352331681	0	1.32724700259531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64038335-1	5.84783379894869	-0.309729664057274	0.805407777373133	-0.384562544289637	0.700561549136257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23781807830494	1.93399614274172
Merged-chr18-56359013-2	6.98984517467496	-1.76946688529768	0.648458024559804	-2.7287300307508	0.0063578730244279	0.0783444441987311	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16927342013646	2.16318252143804
Merged-chr14-57537820-1	1.91284792483671	0	1.39287940345037	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108531405-1	2.60393281850742	0	1.35174681419784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91758395-1	1.74459452885817	0	1.44072393699115	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61698916-6	13.4754844354234	0.195252487054468	0.481276910670361	0.405696767755812	0.684965417497304	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64850491364121	3.96983777006511
Merged-chr2-75998128-1	3.65216392946601	-0.820739205959162	1.09844351164967	-0.747183808047219	0.454952616622747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37331776431736	0.683637474991079
Merged-chr12-84178229-2	3.01574334741601	0	1.33607864692881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28175564-3	7.01271086815096	0	1.33925778835936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80641692-7	30.006918076363	0.770118987339273	0.341651279318555	2.2541083085517	0.0241893551105051	0.217147020662203	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67991768935634	4.32340923288693
Merged-chr11-114998215-5	18.4145364191961	-1.20582811288065	0.43571108392248	-2.76749469401882	0.00564889649871275	0.0714128053017766	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56978596857242	3.40696885927468
Merged-chr2-90655685-4	6.12578034984383	0	1.31664653703776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35729707-3	5.56947461910407	0	1.36961536831982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92296608-3	5.93994757648434	0	1.30224678143916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30532235-4	5.85516610617886	0	1.30723771488801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128771255-10	34.2770726949303	-0.398501395685549	0.301663805997468	-1.32101162871655	0.186497486845215	0.969057313564521	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20627728356518	4.79298028059346
Merged-chr12-100609974-3	5.80962992640741	0	1.29463716110691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42101605-3	4.74781451401828	0	1.30356217366625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114292149-4	16.7519547409755	0.706891188086337	0.644882271125785	1.09615540655553	0.273010770910968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02846146672608	2.21043983090998
Merged-chr3-152928788-4	8.52039693501906	0.22849183631007	0.81216977293921	0.281335065553064	0.778453417522724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45056995984906	1.26501898168246
Merged-chr8-68908592-5	24.3097786268821	-0.817636815046587	0.407895957726011	-2.00452296611335	0.0450140692909872	0.343750979493584	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75997948372019	3.53517497654733
Merged-chr1-105986540-6	13.7979237694005	0.250650198912036	0.489406374286549	0.512151479999482	0.608544997654676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26006618677455	2.88285023239858
Merged-chr2-160069034-7	25.6677264800007	-0.298869932274445	0.492114608778223	-0.607317740508563	0.543640067252124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6529525159985	2.4248088037225
Merged-chr4-108369790-2	4.09271362969508	0	1.31026840351316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34096531-3	8.57705517637593	5.04172288494885	1.04778670334702	4.81178360905296	1.49589268559287e-06	0.000111714975351716	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	3.14628950319902
Merged-chr11-88161808-3	6.61716780709298	-0.13145954941949	0.77076553439158	-0.170557119582754	0.864572017393401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63007127140967	1.65013357957091
Merged-chr11-4714961-5	14.9984866128539	2.71264332166087	0.588815127334816	4.60695249787357	4.0861329936525e-06	0.00024723374685483	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15770559050072	3.88565313643894
Merged-chr10-8238817-3	3.9499490070639	0	1.30880523080536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7869458-3	5.41943650641656	0	1.32728913818635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137365888-7	30.5794399579475	0.227798437850704	0.35083241847478	0.649308404397295	0.516139054530068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07513859867558	4.07427190776655
Merged-chr6-125447304-9	39.5816254855636	0.850386508609419	0.330042245694469	2.57659896483873	0.00997776384231246	0.110760624072187	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5168390744416	5.29256621617028
Merged-chr1-43911995-2	4.11231984357676	0	1.32027587842523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151105423-4	7.26027733816586	0	1.31229857584794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72319366-2	4.21784071760979	0	1.33557309574915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35975826-2	3.8526255411021	0	1.33692514478357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17975427-4	5.84613618639664	0	1.31186658640292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17346423-6	17.3354789034123	0.341659475325794	0.398224001954994	0.857958017719904	0.390915645801726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85128815432247	5.16995998093767
Merged-chr15-4042572-4	6.95223418253954	0	1.32226112699027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79178969-5	15.6306635955502	-2.03320948597557	0.524768317514169	-3.87448978552458	0.000106848324663619	0.00334232198347002	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77801193941299	2.38863282318632
Merged-chr15-31460780-3	6.12729996510116	0	1.32700866107064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31087403-1	4.80514883268896	-2.88973851550718	0.863453762794323	-3.34672062364447	0.000817735787638343	0.0162591383537102	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88998031357317	1.03956264035389
Merged-chr17-8920536-1	2.45326192181605	0	1.96860452803988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117199673-1	2.47102334935789	0	1.57301261012758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82023527-1	3.73512667766691	0	1.35012132675085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72331380-1	4.73929156801639	-4.37733834913023	1.06500542949004	-4.11015589960537	3.95392079382349e-05	0.00151894713811399	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74427369277227	0.382164212378408
Merged-chr14-70541106-5	13.5522286627812	-0.0756010519574439	0.468749507383787	-0.161282413669922	0.871870973784836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62124556851912	3.99041761191436
Merged-chr4-138427546-1	5.83759330572602	2.71950777424974	0.978805442636151	2.77839461836816	0.00546282298037282	0.0697759246433625	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05954461216879	2.89171528332204
Merged-chr1-161195869-8	25.0908052187063	0.299660659022855	0.331583754367562	0.903725393888506	0.366141030420825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29343848356534	4.67566296930165
Merged-chr12-54577457-3	5.08745683900923	0	1.32320192210152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55710051-6	12.8277431216594	-1.27638155333944	0.669003270844499	-1.90788537061745	0.0564060334991482	0.405267582741653	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47390197375697	1.4028653962853
Merged-chr13-37561064-2	6.46592106459184	-2.96808682364974	1.09042337430639	-2.72195818026894	0.00648963543041072	0.079596713335214	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41003110243743	0
Merged-chr7-97383647-2	4.07094084469946	0	1.32227260570215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-13031790-2	5.14742830309488	0	1.34335162323798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153968787-3	5.66485910571156	0	1.31935802058722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68361241-5	15.2750242437798	-0.0632344841454794	0.528574045932046	-0.119632215452381	0.904774498744506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10416498730128	3.23276419112574
Merged-chr2-154220104-3	6.04430429229339	0	1.29963329802382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72323231-3	7.36128162242283	0	1.31444243460768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134304851-4	7.12249392187903	0	1.30073560521678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62231579-4	14.5945563178037	2.08657316624654	0.512367711667553	4.07241346152664	4.65284897159418e-05	0.00171582995991983	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68075462593689	4.41539419050915
Merged-chr10-96001118-4	6.59948385639827	0	1.3183711867477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41980922-2	4.88771607603935	0	1.30568979425594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138288942-8	23.8210899425656	0.705953932040379	0.343569412600814	2.05476362606415	0.0399018410731777	0.31593671474226	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2899781532367	4.93901912564017
Merged-chr19-40700141-2	3.77871242957111	-3.03413404085109	1.159489812589	-2.61678369909627	0.00887625686269779	0.101155891341097	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51862717222125	0.382164212378408
Merged-chr2-4461043-3	8.74459632579406	0	1.29061477419487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31260904-2	3.76453407922847	0	1.43923251579118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64066209-3	8.72176100403437	-4.0538726219875	1.14956391094208	-3.52644388311157	0.000421180411369233	0.00965700181099435	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70391616355683	0
Merged-chr18-26932455-1	2.88528122845562	0	1.36227071116991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137660176-2	2.02093853725954	0	1.57664822905121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70572643-2	5.95389811662728	-1.40467580125015	0.739114915908694	-1.90048363389229	0.0573696807222976	0.410746045412431	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82471687726577	1.56112970471021
Merged-chr5-129955091-2	3.36222784021874	0	1.35644340170009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63111176-2	3.05795782512686	0	1.37941525239361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3342507-1	8.92633768361663	0.0707010842561412	0.57736017367155	0.12245576934505	0.902538073242798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22259900395894	3.93538574264725
Merged-chr4-42879801-2	6.48426613073774	-1.44877778939615	0.800661756966751	-1.80947544551739	0.070377171490777	0.477556245922774	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35366207600187	1.93717404318333
Merged-chr9-72654768-2	4.27255776049937	-1.7485634559257	0.892611789729332	-1.95892937562019	0.0501210582587557	0.371339078568781	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74608517648706	1.31734301959449
Merged-chr8-34817893-6	19.1098287810229	0.537686500565668	0.356515538745866	1.50817129165566	0.131510692779258	0.756537569006777	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31803735581242	4.84759204264032
Merged-chr10-96732207-3	5.43391413009276	0	1.30822452644401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115488920-5	14.8287998699917	0.246003738322471	0.469676153756107	0.523773106969821	0.600436360433896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87817930193025	3.29602312433432
Merged-chr7-114020861-2	6.08908797100077	0	1.32391048052611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100683243-4	7.41156473929216	0	1.29056157266427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14815854-4	10.3738924628526	-1.2956692786691	0.600150590884193	-2.15890694493895	0.0308573869705048	0.262336079766019	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5696123733433	2.08628700317133
Merged-chr1-37735042-4	5.17095783481619	0	1.31133174907718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133825837-3	10.3308596830857	0.285939591268403	0.511495268522812	0.559026854919286	0.576143392554681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31162658600152	4.51431600661893
Merged-chr5-113398160-1	3.50362326521281	0	1.42963448035968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100006046-3	5.08900550210066	0	1.29678912810752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103872161-6	13.8996945943808	-0.0702355120484159	0.356623707934488	-0.196945717532942	0.843870016822346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30440277952133	4.12570913435977
Merged-chr2-73509809-4	6.30834449723546	0	1.3176120998659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21707036-5	14.3681624593229	0.570696117356626	0.52268459414181	1.09185563101137	0.274896562330003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69191756771051	3.17941573849635
Merged-chr19-44313340-4	13.5414341335164	2.19770423781576	0.656979484579722	3.34516417848521	0.000822338768728751	0.0163085126498783	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65732583790279	3.89258880280045
Merged-chr8-68993506-8	18.6439447215679	0.061610197968889	0.522665783708259	0.117876853410551	0.906165233666585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09006070749941	3.81534663182013
Merged-chr4-135318167-4	6.08327441214263	0	1.3189148530036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3171481-2	10.3472552632411	0	1.34198335271128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78674848-2	3.3453365128948	0	1.35246472503939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132347773-4	9.9081824873326	0	1.29023147360014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53010944-1	2.37986994171325	0	1.40502657263231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20228069-1	2.37698330050694	0	1.39392025830433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32793971-3	7.67435435501965	-0.678761280234534	0.680024225245416	-0.998142794088805	0.318210121391022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06872229620315	1.66210910851734
Merged-chr10-111067721-1	5.54872541046695	0.64425297302988	0.961216945828887	0.670247206757597	0.502700215292978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79411908269571	1.79257770822194
Merged-chr11-44438507-3	8.64052574950748	0.553986038823114	0.755346482077343	0.733419764264407	0.463302448309352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37712138444658	2.79296600897344
Merged-chr17-65961679-3	4.27761720852047	0	1.37730042525505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83754538-5	12.5382519446655	-1.81135491321774	0.569636090387179	-3.17984577133547	0.00147353455170196	0.0256225622180725	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47372228315303	2.64377392362142
Merged-chr11-89051980-6	24.4742466050895	-2.42465419327635	0.402707394032035	-6.0208832249141	1.73467878115116e-09	4.06287883989619e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.69034877713275	3.06037528657338
Merged-chr13-60480014-3	7.11862690356729	0	1.31589065700175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35890917-4	6.26629489788899	0	1.29972569634208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129306248-7	35.0308885749228	1.66947064465517	0.365246867576653	4.57080071824244	4.85864154707538e-06	0.000282970401546513	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14123385103751	4.6838172388088
Merged-chr5-122770991-1	2.90759131971604	0	1.31969825049568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95846573-1	3.94516738617937	0	1.34460642418706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29200044-4	5.77088600895631	0	1.30147074624123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107399579-3	9.7023352825055	0	1.28989649266526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91869239-5	22.8219820209359	-0.527591049669093	0.366351311198189	-1.44012327386943	0.149832525529547	0.828408174401705	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28088125594942	3.7498104927649
Merged-chrX-77534008-2	3.35727364377075	0	1.33487990497129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23436513-4	9.85512871650732	0	1.30162706202719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87260961-4	13.7268503156566	1.52392261546274	0.634764807582575	2.40076733501723	0.0163607352648849	0.160046198595684	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12342234462223	2.86829562625364
Merged-chr16-29454982-3	6.2952335108394	0	1.30127275745364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135618181-2	10.6333432790463	2.92675502698901	0.816872896802018	3.58287689363546	0.000339830786267089	0.00823686296713991	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	2.42585300114893
Merged-chr18-5349008-4	9.37451781031467	0.110155669035677	1.29099147066599	0.0853264111643202	0.932001895023215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr7-55874926-4	5.53238764024286	0	1.31481674945244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72518677-4	6.31762080348564	0	1.33596516874999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59620104-5	14.8657232179588	0.861494859064611	0.577399506010827	1.49202562540546	0.135692427665014	0.772652263697981	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44702601886635	3.21702790026272
Merged-chr6-135350292-5	20.2294202567746	0.369369253720989	0.382009142964309	0.966912076644979	0.333587988915885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33121339476331	4.72416646792555
Merged-chr17-28707446-4	7.21874866971017	0	1.29501540760703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88458881-4	10.0001582955206	-2.27095392789856	0.731330483812001	-3.10523624840769	0.00190127100130044	0.0312633253273726	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57968878974052	1.207189364431
Merged-chr17-56251651-4	6.53428346078082	0	1.32907377465449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78268053-6	17.1182757807276	-1.20745350547742	0.447428533217067	-2.69865110478243	0.00696211235292826	0.0837992620767085	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53342226485362	3.34385981813042
Merged-chr8-92849798-7	28.2428180038297	1.67993760511923	0.480351360652464	3.49730997500947	0.000469975400691995	0.0105029702708321	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55713668739388	4.31477698059006
Merged-chr15-72837931-4	13.1638819910045	-0.704691197984727	0.436938327052948	-1.61279328077652	0.106789426405276	0.652417899951305	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27424121484563	3.53145006446512
Merged-chr16-5244633-4	4.93604180112392	0	1.30293599729156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5517471-4	9.0522512790021	0	1.29538192070095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115624249-4	6.30359177424974	0	1.30020690964462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74823743-7	23.0832664198468	-0.60815805726967	0.400486054645675	-1.51854989759314	0.128875830645504	0.745597169487481	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24917501281575	4.54495540770077
Merged-chr5-90020238-7	21.222471691538	0.736352030605386	0.342503129624543	2.14991329104813	0.0315620741068299	0.266226319166762	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52975911610719	4.42853344330102
Merged-chr11-85524402-3	5.39219899867782	0	1.31533496477973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24781020-3	14.7480175374471	0.771509302530814	0.408803646618033	1.88723684075078	0.0591284772019937	0.419295656130383	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23948783300144	5.02130862739427
Merged-chr4-132806980-2	4.19365698569554	0	1.33564970538751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105785256-1	2.31999494496982	0	1.42429261878469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51239710-1	2.18747858108617	0	1.41107704743603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86173866-1	2.52492926485138	0	1.41308948187641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8899376-1	3.06381029554023	0	1.48973580596241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22700112-4	6.58736762840483	0	1.29782167097635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76551498-1	3.30099041048592	0	1.42009715063394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90156214-1	3.76661433241465	2.7570387990417	1.09653555090831	2.51431774989687	0.0119262926359283	0.126680025778182	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	1.73515138435419
Merged-chr7-101947351-2	2.77104485024684	0	1.37335898159697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4934713-2	3.6881612004851	0	1.3572909764589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11374293-1	1.90400323545718	0	1.46683388198604	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4720092-1	2.52075979093375	0	1.34121036858259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191244436-2	4.23424538624284	0	1.35802550257819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97293778-1	2.65076586078763	0	1.39653470480103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37360805-4	5.96395940449988	0	1.31327891335825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61909984-1	2.74875168277883	0	1.34241529981402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44777452-4	5.76783364363537	0	1.3296997128472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18591278-2	3.53243302693323	-0.643082094490955	1.00942724101071	-0.637076223390853	0.52407519509436	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31012164167741	1.00443616959195
Merged-chr3-109246265-1	2.25794200666222	2.51044630360387	1.29578301561848	1.9373971362062	0.0526968164399465	0.385095746710439	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr7-45800673-6	15.2085615569935	0.246791180964566	0.425392625952032	0.580149174923391	0.561814024564724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76055359102368	3.98522513791773
Merged-chr11-67559179-2	7.03315916915514	-0.618021948660866	0.683213981966868	-0.904580358384463	0.36568774482873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60457720730463	1.92713101668536
Merged-chr1-85664229-2	2.04646408914285	0	1.4802229978369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59283380-4	6.43349505649451	0	1.29940423745177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177623634-4	9.51262946938754	0	1.31337459048412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159696694-3	4.43845987256883	0	1.31931137591421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98341594-4	7.27022102055746	0	1.29581468398226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44484507-4	11.2619853329043	-0.67669380395388	0.684338097543825	-0.988829653620949	0.32274649314013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39468609635917	1.94792243194202
Merged-chr4-137389156-4	5.55448330862618	0.888246541694097	1.12611302120904	0.788772108096608	0.430245214217733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.683637474991079
Merged-chr12-77092643-2	5.03205160944976	0	1.30312852423306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106782142-4	5.07717746714333	0	1.32215746937052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75782693-4	6.62999395680725	0	1.31785925916261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108335449-10	36.803654295177	2.00698548187018	0.356799335543704	5.6249697853609	1.85540447507696e-08	3.00107081258364e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56612716475909	5.49951301957188
Merged-chr11-49100608-3	4.92739078716097	0	1.30762288617005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82351523-4	10.1724012488106	0.754745934254126	0.73366843959559	1.02872891011934	0.303607080763116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91018915881188	2.43049365066179
Merged-chr11-8787806-6	13.9856469521206	-0.858480853760807	0.461616253290237	-1.85972839483415	0.0629239625816231	0.439391884896211	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87674212107325	2.5076325648591
Merged-chr1-43110724-3	5.54550132736117	0	1.32134801478712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-100934744-7	26.6316907390539	1.56424302705673	0.41045990129721	3.81095211033558	0.000138432585787551	0.00409944153627751	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44836097134242	4.24160129279952
Merged-chr2-103638147-1	5.60629440150899	2.24867576469668	0.840265338389715	2.67614961841225	0.00744733905111353	0.0880502655390022	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35373145598298	2.80569462824968
Merged-chr2-166009702-4	10.4657700592974	-1.73289810384126	0.619572931637759	-2.79692351836704	0.00515917443949998	0.0667719177903676	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19376685070239	2.5473977117727
Merged-chr13-45897781-4	8.61262434392477	0	1.29315091680798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55795683-2	10.8533138635272	0	1.29194789060445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48161997-5	14.0912350522759	0.185711442233336	0.470503248561487	0.39470809776793	0.693058325874299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57465449621882	3.72792778423916
Merged-chr11-75737200-3	9.77123591128119	-3.42862224814614	0.700751707116327	-4.89277758916251	9.94227409005321e-07	7.97162997163947e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7009110053728	1.15307255889252
Merged-chr4-149144612-8	23.7822182017879	0.67227675608685	0.376972398103834	1.78335803753376	0.0745280394203058	0.498930799835456	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42081839969902	5.06566276774833
Merged-chr6-82863638-4	14.2434867529631	-0.912159529995471	0.546026855497712	-1.67053968282205	0.0948126349595415	0.595676035387578	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5399380828248	2.3069408311478
Merged-chr10-8059732-4	12.6134648434702	-2.13801199273235	0.802345637539497	-2.66470195973004	0.00770565816188104	0.0902714123783217	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1227864771224	1.08186277552917
Merged-chr10-75676442-3	5.08832024595454	0	1.30569025829576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155209196-1	6.95117708695993	-1.57242198673665	0.615605613314514	-2.55426843538754	0.0106411184022104	0.116416293840757	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30800712926983	2.39006831005986
Merged-chr15-35681898-4	6.02915916063185	0	1.30408523508178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38721622-2	3.18500993529065	0	1.37763799232463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33380219-6	18.3659574143302	-0.683803123088629	0.535745830647795	-1.27635733956494	0.201829229310382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16617375146239	2.25313295774157
Merged-chr11-76993037-6	12.8483067748935	-2.92232761664715	0.770926667796997	-3.79066873506659	0.000150242224907277	0.00437705235345116	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84918591623834	1.04220233489076
Merged-chr15-58410650-5	15.9067141011943	0.563162451979869	0.567361097635301	0.992599694140236	0.320905073895117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06640685875764	4.56750606394817
Merged-chr12-91660841-3	5.69626283035976	0	1.32236031623394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24051916-3	7.90877426117098	0.731115157211296	0.609702676936546	1.19913391373774	0.230475879003003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80109269769576	4.02881179861482
Merged-chr3-135522147-3	3.53582237770483	0	1.33315913658395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27503837-4	4.81984682346675	0	1.31154639334381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10745263-3	3.61429806896646	0	1.40720746064261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-23623-1	1.24875182673341	0	2.43325325110265	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85441818-1	3.23100467828055	0.921747540823039	1.01910856510719	0.904464521624433	0.365749138710448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39705937308166	2.35476919581267
Merged-chr17-49019117-7	26.4045082250985	-0.0145370901038479	0.39656062892211	-0.0366579257839112	0.970757756437577	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65978162345642	3.4900134297183
Merged-chr6-50685242-4	8.1843065909493	0	1.29534164448231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142395137-4	7.00581795239017	0	1.32700881284412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101856391-6	12.8196348338561	-1.62675913066836	0.568960694950202	-2.85917664454966	0.00424742195504981	0.0574404046098271	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10094471923987	2.07380828968664
Merged-chr11-103374748-3	10.8265506456043	1.15829636276143	0.664053462605124	1.74428179053139	0.0811099652872108	0.530286322326971	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89459441921875	3.05573020603771
Merged-chr17-8214558-2	5.99696425758345	0	1.34224207797674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4019378-4	7.2233550030903	0	1.29976666097173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124759502-4	5.1298959581184	0	1.32470178983599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145779566-6	21.1796982129162	-0.794074285460181	0.512888556275927	-1.54823942890428	0.121564661636713	0.716545106920084	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98144835357741	3.29398433573242
Merged-chr14-72933801-6	16.5769130250997	1.08811419862869	0.435483665091569	2.49863378549434	0.0124673073598805	0.130999946412406	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83468318091167	4.17146387481647
Merged-chr7-63753550-3	4.58790095758117	0	1.32326597478064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59568814-4	5.15226808321052	0	1.3116369285942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50369438-4	9.67202778756625	0	1.28577459530016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73600347-2	6.05605921005424	0	1.34505190196183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101696081-2	4.82383876913956	0	1.30293579088828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131110211-2	3.59146185253017	0	1.34187208467721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7045869-2	4.29809253586438	0	1.39297929495905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108894341-4	11.9301330736937	2.22955715065213	0.828525691420969	2.6909933798532	0.00712396085105557	0.0851201948753112	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	2.26292282237182
Merged-chr7-29008908-2	3.63724992663962	0	1.36088706088808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86943800-2	6.84095728335196	0.17886173219706	0.542772771965951	0.329533354352344	0.741752587338887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6493261432881	3.72300235263283
Merged-chr13-97474732-2	5.91077628398586	1.71438277636652	0.972510666435124	1.76284213174837	0.0779271192846569	0.515459615019252	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.761354961697477	1.35700371934843
Merged-chr6-30546946-3	6.591354354514	0	1.2999355043169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131431348-2	3.06248442825894	0	1.38492733386861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4533769-2	2.93106044654881	0	1.40613594333915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128373579-6	15.7203622406231	-0.0307051204412828	0.464754291496433	-0.0660674274624067	0.947324143291848	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46761326368337	3.2518483266862
Merged-chr3-96230597-4	4.69076948854653	0	1.30415277713684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10307791-2	4.48486348710263	0	1.31248044063488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120125316-4	10.0460562926117	2.4776832084914	1.19894419060048	2.06655424657463	0.0387761758518756	0.308895280655451	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr5-63943512-4	8.88183231291954	0.0915157851662258	0.460298667084468	0.198818271071448	0.842404903059708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85882910549556	4.07063111400479
Merged-chr3-132744901-4	7.69667107951705	0	1.30082041352929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85346409-4	6.54775656065484	0	1.30604654624169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8758039-5	15.5309068254574	-0.797737962672466	0.513072748512578	-1.55482427196756	0.119987926798312	0.71059734135966	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51898871997187	2.67154369292436
Merged-chr10-117940726-3	13.3535737975245	-0.556241516311691	0.613228794785121	-0.907070119736634	0.36436971801185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85464501879826	2.4873962880981
Merged-chr15-73137569-3	5.90769185007559	0	1.31043425953802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111501820-2	6.21394536162431	2.10507979197582	0.572155739456071	3.67920768212	0.000233959688472001	0.00615968162888451	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38247529973084	4.46105724887535
Merged-chr13-107955925-3	6.50067434029592	0	1.30048619567429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105691048-3	7.0556306906539	0	1.30285242792959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55488763-6	20.3207300035898	-1.98078643866896	0.618604869524739	-3.20202206004417	0.00136466546944459	0.0241014675044126	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81342055039728	1.34106889333198
Merged-chr1-171686700-4	6.73951914869737	2.45679473987794	1.18417571279454	2.07468766107367	0.0380154916883645	0.304506045583215	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr15-90322824-8	33.1927582636644	-0.852464997012013	0.369460285299187	-2.30732511972618	0.0210367021674409	0.194794436705908	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.86072542126602	4.99111279859926
Merged-chr1-171982292-3	14.2993067691144	-2.80336878687463	0.734862035428748	-3.81482326167392	0.000136280434172656	0.0040532263359744	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12881792271008	1.20275690226768
Merged-chr4-105747924-4	7.21716896034543	0	1.30085511642271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57555114-4	12.4393047838184	2.01333485691283	0.529213352868722	3.80439164280169	0.00014215312067205	0.00418241234733714	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76364477398959	3.62256825651194
Merged-chr3-60408905-3	7.83404736234885	0	1.29970568061849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37893219-1	3.75347808175037	0	1.32742386411525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49781805-4	8.16824720639663	0	1.31114290717317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19411365-2	3.15182455795136	0	1.35271401518964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94093094-1	3.86978543154154	0	1.33601108452606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132227844-4	5.78218344816447	0	1.30745799340714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99632449-2	6.35760278985422	0	1.29087633449364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33674720-6	20.8536280060285	-4.06623989168199	0.673389111830264	-6.03846991322743	1.55582428710611e-09	3.73245010220416e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36788383732492	1.29358708977899
Merged-chr1-130918773-2	4.80664172099469	0	1.33223696975404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191071708-8	27.4145560735475	1.41014293701768	0.319168808003185	4.4181727714558	9.95388399911834e-06	0.000504613269050727	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72584770995755	4.93887864462639
Merged-chr7-100500855-2	7.09115050177984	0	1.30397928149307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113780292-3	7.36117579135125	0	1.30673731910773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81081440-8	26.2563789519746	0.757124840793754	0.384974909251422	1.9666861985005	0.0492193989871005	0.366528871363085	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42411872386548	3.99384334859391
Merged-chr12-102498569-18	54.211845144688	-1.0557609301057	0.272499190627506	-3.87436354462013	0.000106903723853235	0.00334245489900167	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.56926137655103	5.48752451640077
Merged-chr12-54791621-7	30.2200144882343	2.14173888246806	0.403157351569947	5.31241430703881	1.08182302600338e-07	1.33131464137884e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08763172665407	5.75418820657821
Merged-chr9-96438178-3	12.1671585681053	0	1.29150813978554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91885202-1	5.43969394618567	1.41576844006295	0.701037004838396	2.01953453283014	0.0434316918234069	0.33555064245594	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36675850724176	3.60006211724349
Merged-chr9-58954638-1	3.05834335043732	0	1.39237701245008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105890793-3	4.2110866135694	0	1.32359549508082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94902920-2	3.43495971973707	0	1.30918506103979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36812622-7	44.0524453431252	1.49335633429228	0.38380389108419	3.89093588935164	9.985831696992e-05	0.00316303518212137	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95400233867094	4.79772383981851
Merged-chr3-27453707-4	9.83936195217121	0	1.29189574188599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-86018742-4	12.7675323659823	1.76220175246705	0.458962476296148	3.83953338993662	0.000123268364830871	0.0037430736841255	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90899205064105	5.04967766143453
Merged-chr17-34364043-8	26.1122888019628	0.00342482553517822	0.3383527899801	0.0101220549574296	0.991923906533472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84477890329183	4.79996075206663
Merged-chr3-61426087-3	6.06238875888906	0	1.32567551840466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150840289-3	9.1282465329389	0	1.29580981517652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56745222-3	5.95868367135717	0	1.33317542511535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116620093-4	10.2241800924809	1.360422181929	0.682355081579629	1.99371590928827	0.0461831097554887	0.349737106279078	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77875747549831	3.30483543417642
Merged-chr11-71849595-4	7.1594090916869	0	1.3202191438527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125990315-1	2.37272014031009	0	1.37602267525848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8827228-2	3.53681712830117	0	1.38383489748345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119977911-2	5.1404381045226	0	1.43441821521142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180607629-1	2.03805299211581	0	1.37687706839158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69573947-1	2.11336357169112	0	1.45647256358188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126630127-4	7.24413644472622	0	1.32013457731566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82074021-2	2.60713356393082	0	1.44219966736496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12027992-4	9.45051715920189	0	1.29239114898063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57468765-1	2.86765903280189	0	1.40255426446792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29522986-4	7.59374687040404	0	1.29343292563632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71931253-1	3.07373951724914	0	1.37831115370268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32158413-1	2.07012142526401	0	1.37733773707306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55776952-2	4.77279941885615	0	1.36040620393751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64789822-1	2.96722634243034	0	1.40278179904341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32361460-1	5.93758537760913	0.977687171534047	0.702252489301856	1.39221602832055	0.163856990529107	0.881848040118186	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03423211966624	2.67868644106817
Merged-chr14-26487174-2	3.03814027211753	0	1.33607271402149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146692719-1	2.56629099546654	0	1.41851425806336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142270951-1	2.60464996355283	0	1.45371463423615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106164145-1	2.47085346762448	0	1.41226791438269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11261198-2	4.12415128950616	-0.124999809813628	0.92257163876327	-0.135490627027288	0.892223974472343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81801140412631	1.34805514843284
Merged-chr12-80872578-2	3.63957527550892	0	1.34213385136919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108135881-6	15.6442937305635	-2.27930462815175	0.518203801938478	-4.39847145008472	1.09015964058593e-05	0.000542142860530655	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74027457858089	2.58328144429995
Merged-chr16-43967048-3	15.2403428947414	-0.882189923069841	0.449087809769481	-1.96440407394419	0.0494832507756442	0.367823058262456	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64950614299453	3.87022410157085
Merged-chr5-77354688-4	7.09724003178826	0	1.29499619648922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28236935-4	8.95821441111792	0	1.31226610485533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36850183-3	9.27842163109419	0.0403354840320883	0.519639748288375	0.0776220144146942	0.938128730242587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55925888509122	3.45382264509587
Merged-chr2-169703086-3	7.91233204034989	2.41306015714567	1.1969160693091	2.0160646339543	0.0437932175983339	0.33765097296039	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-36059039-4	7.76059186868465	0	1.31620864918365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46369396-4	6.86743325068653	0	1.31491634146884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129827901-3	8.22965522580951	0.628554955244016	1.11492581024037	0.563763928927705	0.572914803355755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.733321818366247
Merged-chr7-98086515-2	7.33227454559729	-1.81126978375019	0.733841529411242	-2.46820289007542	0.0135793328082352	0.139389739504703	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55143142705439	1.65880184244346
Merged-chr14-17713219-4	7.23142993182444	0	1.31790405481427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54565635-3	11.0072270863251	0.225212117813152	0.434718752182106	0.518063959014148	0.604413645298368	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44337785572224	4.42178592422055
Merged-chr11-30676311-7	20.2775366889047	-1.75372285055246	0.514666824058569	-3.40749154321416	0.00065562940153642	0.0135922458352788	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82795931145348	2.41963131209394
Merged-chr5-142424934-1	3.06281762745202	0	1.33921698818575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20812106-4	7.5005142078634	0	1.31392500388175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97957725-1	3.77428172172925	0	1.31798043763069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99001517-4	7.20692460856975	0	1.30615804848751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74627974-3	7.40028449964243	0	1.30120797777395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115487840-3	11.6681007021414	0.454448398933585	0.599549443062033	0.757983189197235	0.448461046632596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9352028829414	2.70640964490296
Merged-chr4-3768259-2	8.9110459829465	1.05696501516901	0.738616486932554	1.43100652892078	0.152428343961604	0.839139221947346	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93358696133926	2.36907416230548
Merged-chr3-65517690-2	10.6075770370512	-3.19941289127255	0.78189425436139	-4.09187415488257	4.27900858176576e-05	0.00161438578873828	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49919443971744	1.19133112147929
Merged-chr11-35091083-3	10.7757253356486	0.320533343354736	0.494461777219109	0.648246958859876	0.516825234096911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8217437744899	4.28939683379139
Merged-chr7-143154033-4	6.2220619733147	0	1.30009483241679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61757367-5	17.1916274307788	0.246497974722965	0.510022052514899	0.483308463835031	0.628876731290101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17515799347195	3.24402839470236
Merged-chr13-38503732-1	2.58366269764368	0	1.36472488091847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116421363-3	14.2736587297695	-0.730912605580224	0.47173423105711	-1.54941608528667	0.121281729480411	0.715533138921296	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05447416639686	4.24716480221159
Merged-chr11-34771847-2	3.83924517426434	0	1.33090991028916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173412657-4	11.8995125959587	-0.828418424135306	0.553846682322938	-1.49575406078224	0.134717756757045	0.768508645399027	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71332389425959	2.55885937771851
Merged-chr15-6030564-2	3.74939093017406	0	1.32507899201249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125501429-5	14.5596962897974	-0.572893085224612	0.468246955776017	-1.22348491145055	0.22114659969271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49239166016177	3.73115435885655
Merged-chr2-155979456-10	41.7551298664026	0.449937549934813	0.255289315833329	1.76246134103224	0.0779913825399702	0.515780273601548	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03183642627064	5.43311967625911
Merged-chr1-131287496-4	7.89250190983396	0	1.33671691885723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134719877-4	7.08948353658927	0	1.30463295224915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113334255-3	8.790340226574	0	1.32689289768668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110885943-2	4.06443571555431	0	1.33810022086148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108740616-5	21.7674779442594	-1.66529414115363	0.601883559280684	-2.76680450142853	0.00566086910231324	0.0714950043215619	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8029352645128	1.57664565284388
Merged-chr11-64615364-8	20.4544726024307	-1.51760421715052	0.472997574038057	-3.20848203130195	0.00133437647031242	0.0236887553093682	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93971880474703	3.15734121391728
Merged-chr10-119610541-5	19.1821271807878	-1.38098796635561	0.446205362995006	-3.09496048430745	0.00196839119791597	0.0320298265881776	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87008589589786	3.19304234463496
Merged-chr19-5094474-3	7.9612418096122	3.35883937854876	1.08531689425415	3.0948006027834	0.00196945250254488	0.0320298265881776	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr13-99433424-8	27.4031830525756	-1.07790515206228	0.408200360683179	-2.64062763261222	0.00827526162663378	0.095573567736658	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50984025148951	3.40800258503165
Merged-chr2-152709245-7	20.7163096165296	1.73583720427337	0.412637107039826	4.20669196894557	2.59135966817954e-05	0.00108132176805147	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9002782508936	4.51745436834911
Merged-chr5-122093211-1	2.22672194487792	2.5155713849593	1.37075859895667	1.83516732039761	0.0664809016182707	0.457435084463253	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr7-132765810-2	3.162875136503	0	1.34486542647949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57628779-2	3.43243625115634	0	1.32715693888077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94123087-2	2.49679375159796	0	1.39554593125115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42906000-2	6.22712675617201	-0.227860021189024	1.28701922844749	-0.177044768370623	0.859473224901974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0.306240821987646
Merged-chr9-69443370-2	2.17149399031326	0	1.50166856775155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45521511-2	5.82191640910435	0	1.3312289570814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97682008-3	6.60739819120336	0	1.30285486153564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-25857290-4	6.07189629108689	0	1.32322472495105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28959700-3	5.97007625111689	0	1.30298980075388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67055836-1	2.53341861312899	0	1.42053529204178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103005277-3	8.19086221938546	0	1.32169653528134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66807431-4	18.8931717564359	0	1.29693571402445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-7313396-1	2.68291416691243	0	1.39549917703249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66202723-2	4.52686413812819	-0.736580764725891	0.832272861150983	-0.885023168612327	0.376144135664379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28239911696915	1.27911570690487
Merged-chr13-6228486-3	5.55818906020207	0	1.33004237378392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80789709-2	3.08702553507053	0	1.3355077897363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164085888-3	5.6944755465798	0	1.34327331627529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19916074-1	3.64917988829104	0	1.35182021492804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25904870-1	3.02907967023249	0	1.4420180793347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54937929-1	3.77210738231806	0	1.3529326481636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87488919-3	5.59015798157414	0	1.30347110131719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136834012-4	10.5967784899614	0	1.30686587004991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37673997-4	8.06219284738936	0	1.30039183510962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37139381-3	5.70804050723984	0	1.33631630473366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136505503-6	16.340059799452	-1.06181113906747	0.508713028105713	-2.08724974672128	0.0368655647894711	0.297772562734555	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45133610633352	2.74558678148638
Merged-chr11-87039431-4	8.8180857233566	0	1.31115522485135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66471328-6	13.3504908064222	0	1.28847953052557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86884151-4	16.0140804870949	-1.46802700525593	0.354549528813224	-4.14054140805045	3.4648705270203e-05	0.00136324409966281	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.89711538712002	4.45031534442553
Merged-chr9-116123745-2	4.33526695242278	0	1.31796602379197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108706204-1	6.64092651406169	-1.76270545250587	0.842994206343819	-2.09100541764215	0.0365275783348476	0.295631797605765	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01002822087375	1.20539659680455
Merged-chr2-128743543-6	13.0953605529175	-0.960454791146507	0.598659070839457	-1.60434350355659	0.10863835680654	0.660379726872574	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49130755083681	2.45984447747155
Merged-chr16-84702948-3	8.61086016810576	0	1.30964240213271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116100572-3	6.40209797999107	0	1.29367754934152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152333900-4	24.7595618157063	-2.22412925072799	0.4035560438568	-5.51132682705456	3.56138717478774e-08	5.194696569725e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.47341327748492	4.12823727251439
Merged-chr12-91637666-4	7.82718954380159	0	1.34838487000531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26449659-6	15.7596353875706	0.296850110625744	0.454076273766612	0.653745037509536	0.513276082026472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42667342464623	3.33681377576098
Merged-chr12-34828387-3	10.9201918970396	-3.26647384442899	0.895420931975829	-3.6479757483681	0.00026431458000083	0.00674947266304581	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56804960356419	0.581381506691384
Merged-chr14-103392562-2	2.74049271764065	0	1.40269121500224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86446285-1	4.8114070068076	0	1.32657131632005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119818008-3	6.73251345966399	0	1.29480079694947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132586071-1	2.40671350344915	0	1.35065330781634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-153878193-3	5.86974318424515	0	1.32647042655904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155405886-2	2.9984372374066	0	1.37980328330054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76364754-4	6.66308297481429	0	1.3025666961167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104067423-6	24.1842360474723	0.385887505575049	0.540252919869419	0.714271948161462	0.475059034738102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29337588063674	2.75816278648396
Merged-chr13-30625324-4	6.40033895189588	0	1.30445624850425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102646229-4	7.80536698050291	0	1.29065133639891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24587957-4	5.35698308932342	0	1.35573269591435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27308630-4	13.135540013746	0	1.29493359544548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60947745-2	4.53043695406909	-1.2678930671482	1.21533615223294	-1.04324475563299	0.296834949966361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.68348383313306	0
Merged-chr9-124016797-4	7.93648797431486	0	1.29858042894457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-81694623-2	5.58793937405759	0	1.33042440488435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135611090-2	3.11215950222146	0	1.3577784911113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51094892-2	4.76399328702734	0	1.37534517338163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158176564-4	9.30869945692689	0	1.29454971155994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67542701-3	3.89439324387696	0	1.32442471966764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50245431-3	6.24497312634551	0	1.30184761397447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170343902-4	10.9677025033093	0	1.29002703885353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20494203-6	14.8253425032026	-1.68421168984556	0.604261526334168	-2.78722310861499	0.00531618640303815	0.0683034834236985	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67836539615945	1.85545068682378
Merged-chr11-82561747-4	6.70745236523526	0	1.2999761955029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86812873-3	3.72046937106681	0	1.3276923275843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45464439-4	12.21329440708	0	1.28444910624844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3777085-2	9.13159028080964	-0.282273660383443	0.614593595172176	-0.459285066751086	0.646029470051904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4096128044083	2.68683437875822
Merged-chr13-95494579-2	5.44891497872914	0.373062413992168	1.15588744663565	0.322749775575477	0.746884752247412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.79695861841345	0.735627456805112
Merged-chr11-118103049-4	8.09946960945283	0	1.29012382724291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70871235-1	7.62117149117696	-1.62877931565408	0.603959638058395	-2.69683471049533	0.00700020075265085	0.0841302774979559	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19188645702634	2.49164944546238
Merged-chr11-116379745-4	5.76104494726889	0	1.31000107988153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97164462-3	6.79503134063845	0	1.30266987520751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32202443-3	6.48016656835327	0	1.3238144886441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82744472-3	7.21548968785045	-3.04869703593076	0.85350878014661	-3.57195743833716	0.000354323004572412	0.00847185914994102	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72740145830376	0.994591904006138
Merged-chr4-42902270-5	11.4375858380858	-3.24141673481552	1.04735807660499	-3.09485056469184	0.00196912079552329	0.0320298265881776	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49626767742102	0.306240821987646
Merged-chr3-9516336-3	10.1404915581573	-2.49192439014437	0.610794427013938	-4.07980865563383	4.50727863882848e-05	0.00167922799787338	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14703594044	2.1926321744293
Merged-chr6-54705478-6	13.6773388274487	-0.74538387366973	0.412930206129636	-1.80510861788523	0.0710576867778325	0.481124816100326	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12712345668989	3.36793544212227
Merged-chr9-10668815-4	7.5221956841467	0	1.34030175835998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79821687-4	5.6780797865668	0	1.31794625603136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27325915-4	6.03742134503834	0	1.29597465168616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16747458-8	35.6842223594686	-0.391589696172053	0.316227122320862	-1.23831786880926	0.2155982207262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08482875386485	4.62673526289301
Merged-chr19-6668750-4	8.23376647219133	0	1.30001561374665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117831614-4	14.528556309785	0.778730547827187	0.386591971197997	2.01434744082761	0.0439730684077427	0.338652224887726	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38691835171951	3.84631708671047
Merged-chr14-64657825-3	5.22785754528048	0	1.31672588353609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117362625-4	7.89175651260952	0	1.33267383785851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104660042-5	15.1492347223064	-0.0251394789999388	0.466848231754031	-0.0538493610771222	0.957055182088795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37770079753242	4.39840673315793
Merged-chr10-66930162-3	5.08111227241521	0	1.337414374622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97520641-1	3.10921169280841	0	1.37559242395905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8840200-1	5.17716086660145	-0.362717906503974	0.800124307903948	-0.453326942977362	0.650313334538387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15180644083269	2.87714804785473
Merged-chr11-119676959-2	4.00173342238024	0	1.35165326122615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53377048-2	3.0516488094246	0	1.4442218054267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87802642-4	7.89273548411637	0	1.29804293220645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6119699-2	9.02638410659777	2.55743227284381	0.829095678022748	3.08460451626386	0.00203822981738678	0.0328650907152464	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648566509472229	2.96006934525357
Merged-chr1-14823902-1	3.45279554349154	0	1.32805821265067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117320619-4	6.03790364865321	0	1.32629460998364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3260411-1	1.26916848137228	0	1.52852100965902	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89041471-2	2.75670354393714	0	1.34883131569842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47435471-1	4.63782532350587	0.425662074050983	0.662396332127068	0.642609346407625	0.520477616896666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39031791283449	3.09316302394545
Merged-chr2-72962330-1	3.72572240666684	0	1.35313595146304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127235979-4	9.00681684840806	0	1.28623259439285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69214565-4	7.75155545374649	0	1.29147730906611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-112180176-1	3.16292487696897	0	1.35310836803308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104285084-2	4.04573187547672	0	1.30685225144903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127153578-1	1.71929465028274	0	2.43980846798533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-49558553-1	2.15380652595723	-0.127293024758003	1.50002992615935	-0.084860323476294	0.932372435239914	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30415454164596	1.11812572528152
Merged-chr12-26452253-2	3.09483700760879	0	1.49140459650973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129261452-4	19.1515942891888	-1.7013331745941	0.58147929968181	-2.92587057789517	0.00343493803606857	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7524043178209	1.85111348754977
Merged-chr10-78155599-2	3.53709884089001	0	1.33576594398265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59528753-1	1.85489545242798	0	1.39631013023214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46604508-4	6.31924664853741	0	1.32010699105462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40626253-4	6.01213145071846	0	1.29865090863356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35062293-8	22.167744125958	0.240140447264656	0.372436317863537	0.64478257287638	0.519068096921729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69525543576453	4.89584367519795
Merged-chr1-161170869-3	7.95977684862284	-1.12550234994101	0.820514325945638	-1.37170347226281	0.170155767047216	0.906637210817625	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46417425384811	0.843323834477631
Merged-chr8-108393068-4	5.62346701404078	0	1.29455696044364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93195812-6	12.7887663199122	-0.378623707481995	0.519204840405909	-0.729237630346419	0.465856316378159	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86611622125191	2.44827087945037
Merged-chr6-108549758-4	7.48634121535494	0	1.30730803361327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97962072-3	14.6392020540834	-1.25863756095556	0.705785166419887	-1.78331540649973	0.0745349748721226	0.498930799835456	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81169868667118	1.26501898168246
Merged-chrX-85773289-3	5.17696426844849	0	1.32663175640883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83673268-5	12.1745656280722	-1.80750932970894	0.861435417818919	-2.098252860656	0.0358828142798849	0.29251476820526	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33630563493404	0.581381506691384
Merged-chr12-112870953-3	4.24770236411955	0	1.31746306917813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61917827-3	4.04247567781225	0	1.36698745191671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62847894-2	4.5309929295515	0	1.31323283677237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104281934-4	5.41515539540559	0	1.29346876441834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102354572-9	33.141756462245	0.835880594722265	0.367749413084535	2.27296241674795	0.0230284448730998	0.209263907478457	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00373187237865	4.77966596354395
Merged-chr18-50081263-6	18.1861075256371	-2.2418375699551	0.523364170305319	-4.28351365483667	1.83964802907041e-05	0.000824510563152505	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5519090676295	1.67756367980613
Merged-chr5-36560722-2	3.64081000754327	0	1.34503995386758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79786728-4	5.14550237973908	0	1.31598604229343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80299708-4	6.01454910957805	0	1.32329843182495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129895533-3	10.9346948814074	0.989763649503198	0.439654241122555	2.25123189298951	0.0243708538959772	0.218395202782025	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1960576409426	3.99392441876194
Merged-chr15-78864072-8	25.2755437249856	1.67024035841831	0.414718021255216	4.02741205545646	5.63941505016347e-05	0.0020049685302937	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55731122283825	4.68484063052614
Merged-chr14-60443987-5	13.522400487398	-0.307373207470438	0.47879323432464	-0.64197483471963	0.520889522737053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14104287532025	3.31406156957738
Merged-chr17-26437261-4	17.9936244438182	1.31125122598454	0.616157710662749	2.12810974088783	0.0333279858775679	0.277327208093156	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87716382160232	3.50206981432288
Merged-chr4-102624621-3	18.5981176573468	-1.12919415076032	0.47553779419399	-2.37456236822194	0.0175697676859911	0.169413315509632	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3366939632356	3.05231067795763
Merged-chr10-43842037-2	4.68716378538232	0	1.34610579015052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81225216-3	7.90882002064952	0	1.31639190931806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153401969-4	5.71305789242826	0	1.30254752423911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28702839-4	11.6883540501709	0	1.28528544446585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52909359-4	5.41863635091077	0	1.33923437667083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53558566-2	4.09672224262546	0	1.33224703664019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130629513-2	4.23055230480915	0	1.32747266215736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135705302-2	5.01162925709533	0	1.30403792548337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38132713-5	12.5589166857682	0	1.29151721134867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123136609-8	20.621344292845	-0.581878493557611	0.352869236582372	-1.64899184523211	0.0991493053704032	0.616762981384277	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64596636085187	4.11266457038763
Merged-chr10-44342057-4	7.68999350049772	0	1.30395853508078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145360090-3	11.8816424734538	-0.397768571860914	0.470053660719662	-0.846219495986738	0.397430307867914	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51946378010214	4.02258854975248
Merged-chr11-32238623-3	5.10065640744237	0	1.32437791786841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137826832-3	3.2297893657988	0	1.41295782854993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118662803-3	6.31937682133781	0	1.3062497692007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97175922-3	5.93119582816925	0	1.30696434063459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39803658-3	3.06315134384279	0	1.38763026952673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25663519-1	3.78194838309771	0	1.36667858249587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8624723-1	3.23054205577901	0	1.36323278389902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150340976-7	24.55992505453	-1.53733226856722	0.397940699483825	-3.86321949617446	0.000111902373825965	0.00346393771673685	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.61465623400057	3.92079943088501
Merged-chr3-96576383-4	7.60689323523186	0	1.32111590559705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32538996-7	43.7344383962808	0.63692955941728	0.393269350440397	1.61957589297011	0.105323411552389	0.645816238275536	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77088947126466	3.69701322433741
Merged-chr2-94165054-1	4.66232451059264	0	1.31736365677535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93960180-6	17.0071313397745	0.616182677965347	0.471354170020094	1.30726047875864	0.191124261677715	0.985808351376742	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7423646763711	4.43460899032854
Merged-chr4-41310780-2	3.9128598023751	0	1.33063249852529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56134572-2	3.99686023231651	0	1.32113929959309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95850718-3	6.41704105414473	0	1.30238702101428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55353215-5	12.9879514454242	-3.46253340019383	0.725209069093454	-4.77453130105249	1.80126267087395e-06	0.00012892147917955	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52058277505792	0.82780788634396
Merged-chr14-54765262-5	20.2441394407588	-0.562950841087001	0.403976269277799	-1.39352453076862	0.163461232297141	0.880806274073469	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.64285608022843	5.12602822148203
Merged-chr2-164007112-4	6.98847884844954	0	1.30228996357069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9815943-3	4.56224832411494	0	1.3251631501315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139212380-5	13.4920088085048	1.71909349449273	0.631847739260665	2.72074012087829	0.00651359463682852	0.0798719000071677	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64067088149626	3.22547822118247
Merged-chr6-87547584-3	5.43699227997716	2.43629994071534	1.19429325734314	2.03995118094797	0.0413551883604192	0.323679020074255	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.890396206374751
Merged-chr18-69416294-7	37.5465309476906	-0.234158300473835	0.33205842687896	-0.705171986372112	0.480703212414503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28889163334373	3.98319497996751
Merged-chr10-117893335-4	5.63912975321533	0	1.29573372921345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11299525-4	7.62327096756465	0	1.29127452018903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53390382-2	3.04570036057198	0	1.38018893070573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138013013-2	5.8721548907641	-0.377699232548273	0.69958769283588	-0.53988833196481	0.58927404505061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33689723868305	2.90602146511858
Merged-chr11-60838012-4	9.620445634246	0	1.29255696581599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49178363-1	3.63615526776455	0	1.39524820041834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47354255-1	2.68634106112308	-1.69734324771619	1.31247596075677	-1.29323758946221	0.19592889858964	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.950204084877437	0
Merged-chr10-127731542-1	3.48972795989276	0	1.34552915639204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116978392-4	10.3078443216251	0	1.29740416896739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78271708-1	2.48192435840288	0	1.35301395879537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10599223-2	4.75225565869098	0	1.35850038969382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113032661-2	3.71421702980637	0	1.35684549127039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83297573-1	4.65822274673083	3.67173273476901	1.18477193643237	3.09910508669328	0.00194106158336816	0.0317605000901018	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	2.2114987131338
Merged-chr7-114163118-6	27.6716010670127	-0.758361097640812	0.60130739595224	-1.26118704467265	0.207241465163838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68903915434705	1.93871841517079
Merged-chr13-28844153-3	8.01936767513445	0	1.29426479437819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96554748-3	4.6015269968014	0	1.35457140759979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153234970-3	6.095969631377	0	1.32897866887157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142222377-2	4.1034474722852	0	1.43880331824852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77622162-4	6.11069132492569	0	1.31124072576135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84638664-5	18.0124626121825	0.974265699442753	0.442508149273027	2.20168984694027	0.0276872244050166	0.240942872561624	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02227544589817	3.90619649056056
Merged-chr3-35751057-3	5.32061035944763	0	1.34277209928155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120159066-3	5.49661743472029	0	1.29861788712167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90403813-4	6.4253405185358	0	1.2999022335865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-142468486-2	3.91759763379696	0	1.34005406276904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144971191-2	5.61621566050796	1.38556169013958	1.10878597625446	1.24962050369728	0.211438209521601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.891034856620172	0.905469781553611
Merged-chr7-80049127-2	8.20802228981708	-1.29756741941165	0.762526030404789	-1.70166967116235	0.0888173088999127	0.566727455070178	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73327713434372	1.32852444445417
Merged-chr11-75092307-3	12.0700094176604	0	1.30423082071402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11466270-1	5.19516814415308	0	1.31652199056991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33426130-3	4.70169393959166	0	1.32258321213436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83713990-4	8.1299584950546	0	1.29647989002565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35874584-4	7.81507469392058	0	1.29438957844319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94638802-3	4.99897843597415	0	1.29546964718032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143917763-3	7.65570457511678	0	1.29259661203669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150233559-4	10.8483376039314	0	1.29869630176371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75553899-4	8.94508511359927	0.881200398128047	0.666628641230697	1.32187599455856	0.186209447264319	0.968176522989674	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59126972287468	2.38327122822273
Merged-chr2-18772576-4	9.16728934986541	0	1.31566114065114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94205953-3	6.21004254955934	0	1.29634372332445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14673459-3	8.48765371926771	-0.0961667629834403	0.709070406029746	-0.135623715452886	0.892118756456941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71814141682048	2.68200738535058
Merged-chr7-75576382-3	7.54878268448126	0	1.30084993494204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78096284-4	8.05125348497679	0	1.30686115044311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58990309-1	2.74879830514128	0	1.32236877913728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41775955-7	19.4528268976799	1.12695322210565	0.438420809417434	2.57048296499231	0.0101556821330629	0.112256706538699	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82435873060295	4.31481369666056
Merged-chr1-89891597-3	7.44780587978366	0	1.31006690138936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35736734-5	12.1145665016471	1.08195395695648	0.612107477372231	1.76758820460958	0.0771297713592463	0.511583641823113	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72961950563842	2.88309829444661
Merged-chr6-131264362-3	10.6789453579381	-1.65873325613438	0.772522580609154	-2.14716475319909	0.0317801676742032	0.267720360556721	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19631035870673	1.62581156516825
Merged-chr9-47642811-8	19.4783248091151	1.27124696264201	0.365843206998588	3.47484096553669	0.00051115629527411	0.0111675089505122	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05785514476421	4.64982200880416
Merged-chr6-88136306-4	6.53096752830911	0	1.29863846832762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30781226-2	6.44354772256796	0.740926872358614	0.729185192687815	1.0161024658599	0.309580594944681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86267015735891	2.48751711656498
Merged-chr7-90133463-2	5.14072727594264	1.4716634367827	0.805604125572602	1.82678239853436	0.067732493375953	0.464286951866676	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20773136368296	2.1359713465465
Merged-chr13-65242089-7	21.6509827762986	0.540678989778573	0.408192249464545	1.32456946570598	0.18531398891645	0.965056416937708	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55313914871364	4.0781069183038
Merged-chr1-57852729-6	26.3744088128115	-1.90547628213577	0.488932935473568	-3.89721400193704	9.73056294397784e-05	0.00309498373653463	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22932603155089	3.4314922584484
Merged-chr2-49748757-4	7.01983228599917	0	1.29341591384979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87748826-9	33.6570470295555	1.01094208474764	0.318492620184431	3.17414602624772	0.00150278065128409	0.025992181204482	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20594686469861	5.3449613868913
Merged-chr2-52471708-4	10.4457976414063	0	1.29505151540239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99190092-4	13.2166336049406	0.62153968650543	0.431809155649356	1.43938515053197	0.150041429256761	0.829212384659364	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06582999099796	4.74487135735738
Merged-chr18-75262397-3	9.26034528942093	0.16395718167252	0.528906288297882	0.309992876432164	0.756566373498405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03311164546738	3.25210242546693
Merged-chr18-69576533-3	8.42116122131109	0	1.28686396104591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84171516-3	3.39496788933773	0	1.34248420245243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44029802-6	18.4014563540793	-0.191935512477829	0.412639760320282	-0.465140616427396	0.641830761280556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.676754654479	4.36254032657847
Merged-chr4-46643559-7	25.9328407720158	-1.9303117686931	0.359270140180354	-5.37287002956629	7.74931868410526e-08	9.95660480693581e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54405452567111	3.71478491783677
Merged-chr2-24409389-4	4.47942812553535	0	1.30453712530009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145253254-3	12.3986768936924	1.96842431682129	0.528979334292772	3.72117432423519	0.00019829848562654	0.00543312907410981	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11354462534849	4.49496044058869
Merged-chr9-90276432-6	20.4195909559139	1.63045988541111	0.387815054686473	4.20422019647804	2.61983799739666e-05	0.00108834032916645	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84964053627478	5.39167979367765
Merged-chr5-67814642-3	6.01197993363265	0	1.31769939612002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60360925-1	2.02451887761638	0	1.41418501093398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23023358-1	1.98189081658488	0	1.41533254209212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104115124-2	5.01405969830616	0	1.38199652045202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94794312-3	4.90862185382896	0	1.34716362254379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5844886-1	2.93227243443195	0	1.41149043558579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86135529-2	14.1196510388972	1.46021019902291	0.582331539068611	2.5075238091318	0.0121580390425709	0.128702287263217	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85857589475202	4.31814660474496
Merged-chr13-38296807-2	4.77248281181289	0	1.30854926893979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82914367-2	5.41809496886765	-0.766870325545284	0.660700584950761	-1.16069266928594	0.245766904097687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2940677100587	2.54911206455162
Merged-chr1-54816824-3	6.81651763341367	-1.22223977622975	0.659744230651759	-1.85259638424167	0.0639402311030906	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5967178252378	1.56605965819909
Merged-chr3-126630930-1	4.16540844448761	0.610739687529271	0.993149743243036	0.61495226846151	0.538586242976509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45560157352234	1.69442907999601
Merged-chr15-83474197-1	2.1035277394405	0	1.51233022439098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31009171-1	1.98185965043977	0	1.46391468857455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52482016-2	2.13278701806551	0	1.70229255200788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13363850-2	4.05080141119783	0	1.34626254113845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129943987-1	2.54465351234494	0	1.42279937490452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116216909-3	6.83712175399321	1.06266466549135	0.803220064641269	1.32300562731329	0.185833506457986	0.967068273712157	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52832022843012	1.80505237968249
Merged-chr10-22390644-1	1.37116511057616	0	1.76043124858957	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11169573-1	1.81020357954769	0	1.44165910147534	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41278697-1	2.23352580445041	0	1.35870610682942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22895985-3	11.9680896227196	1.14248397305922	0.541295106703153	2.11064899518066	0.0348024930433773	0.2858378664547	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3847374495529	3.83579073803687
Merged-chr3-75744265-1	2.46310679320749	0	1.35902322056179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95837310-1	3.27619177629533	0	1.36945670440761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34854647-1	2.79343915721421	0	1.39745270189355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123274944-1	2.62756009221043	-1.60317372332447	1.23246474879031	-1.30078667556051	0.193331484054386	0.993873203267612	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31925312226969	0.420961122473315
Merged-chr18-55237918-1	4.56954378140577	0.510107252153608	0.878395598040191	0.580726102557572	0.561425066492935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32639837651632	1.46928333126936
Merged-chr8-56862317-1	2.23457218953163	0	1.41335833451554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65005131-1	4.20914686438286	-0.57544827022733	1.15391709538912	-0.498691173331894	0.617996963780436	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13455762100316	1.1517642783294
Merged-chr18-69628507-1	1.636620853302	0	1.47481850653128	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3513012-3	3.76470940581781	0	1.35604374111582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129393412-1	1.83928599237685	0	1.44714716600939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124957531-5	12.2655789108633	-0.358190018871575	0.792727370077721	-0.451845151803522	0.651380539577596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50132650126363	1.72942046393685
Merged-chr7-100150710-4	10.9250487433612	0	1.29514634840216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29522410-4	5.01406798423301	0	1.29303824709955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115469468-4	5.73371605125499	0	1.29928904736094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170164381-6	12.8382958840761	-2.23209555715203	0.720289238161514	-3.09888783407245	0.00194248545542511	0.0317651788213738	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47918858059201	1.08974267817771
Merged-chr2-159735479-3	12.6181947427404	2.32825879434882	0.591954473126229	3.93317205975795	8.38321849986449e-05	0.00275419706431445	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54523777598426	3.90357375672364
Merged-chr14-54387920-3	14.0400081668383	0.689243746316933	0.486262212083879	1.41743226018566	0.156356586351357	0.853764784070242	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35344681057753	4.93272462782738
Merged-chr5-117483105-4	7.51609101341931	0	1.30474367630813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50670554-4	9.305402260979	0	1.29838223307501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79646775-3	8.9904875218866	0	1.31554754061663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16225636-4	8.26047936393925	0	1.29082682509256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108786740-3	5.66644382604654	0	1.30504285883113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24507931-3	8.62665552886955	0	1.29706910496217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81845382-3	11.2485310340035	-0.203441951708804	0.566220474317225	-0.359298119613431	0.71937208087965	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15274037525695	3.44295655026151
Merged-chr5-104005212-2	3.53496976577427	0	1.36545281519552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82399203-4	7.92131405924166	-3.32350197566677	1.03784416197826	-3.2023131192758	0.0013632872438987	0.0240836356420126	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48527856771245	0.306240821987646
Merged-chr11-53898371-4	7.4157063657676	0	1.29659882535463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29459769-5	13.4279517512641	-2.43800180425365	0.654676303570046	-3.72398052435817	0.000196106060918559	0.00538887580184364	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09001775842551	1.71989966306259
Merged-chr4-53118977-6	18.0807452406234	-1.19155137023214	0.532644168359307	-2.23704949948565	0.0252831050325117	0.224446377048568	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18584155398096	3.04537585383933
Merged-chr5-139732936-6	11.9577543045982	-1.25198575099728	0.647763572658914	-1.93278196527504	0.0532630629326434	0.387889012637525	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05846312912405	1.84022605426951
Merged-chr18-39855575-4	11.367103933288	-2.43154327481043	0.658502987706767	-3.692531879435	0.00022203249770817	0.00592443266445	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1662802970307	1.35032549026822
Merged-chr10-24468853-2	5.0317547926687	0	1.30681205705495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24405870-2	3.66009628689236	0	1.33795124943022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151653631-4	6.9467496759314	0	1.34037726916535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104377318-3	5.41849533347444	-4.24749032414037	1.18467671176003	-3.58535816731811	0.000336615907208651	0.00818155220004712	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93024388302116	0
Merged-chr10-126928374-3	4.23410819577147	0	1.33196324588769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78810261-5	23.2908139577155	0.705898360234575	0.346301194287808	2.03839424142416	0.0415105217368517	0.324431638913357	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65890218961952	5.37729462013362
Merged-chr18-3008717-1	3.73154571684206	0	1.3492503405876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30508214-6	17.5521288023181	-0.00659817006803115	0.502935636536162	-0.0131193130665274	0.989532602925147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10350622025835	3.17804145048245
Merged-chr17-31139662-3	6.50555716161145	1.2692743685987	1.07340225843689	1.18247782564483	0.237016158953339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.963545719069792
Merged-chr9-121305644-4	7.18654178965675	0.786644853449457	0.83141658559611	0.946150061326293	0.344072053097206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.957978550400867	1.41959898789419
Merged-chr1-191110567-1	5.97015746686447	0.42294894563206	0.621005135316028	0.681071575063261	0.495826202050558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78185203339406	3.11460332868229
Merged-chr13-112102218-1	3.18598453233671	0	1.37643098278944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73402352-2	5.95710593539114	0	1.30935556379241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104200026-4	4.85519195664192	0	1.31702583353142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98948283-4	11.2888946585432	0	1.2846456255289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113302441-3	5.03224702267039	0	1.32669861616802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68362102-6	13.6845837224226	0.616510626616342	0.476535924138963	1.29373378875957	0.195757389940867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84856734567907	3.35822082392563
Merged-chr9-20979979-3	5.77032031926764	0	1.29277739794946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-85195256-2	5.73731327703906	0	1.31197642275016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72868928-1	3.04207640902211	0	1.32301280930814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8164930-4	5.25867556189257	0	1.3395773354103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58399005-9	80.0841359080805	1.3928118638027	0.34922688665424	3.98827214349532	6.65562869189176e-05	0.00229872469609069	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5853110913688	5.08136257259904
Merged-chr4-149398449-1	3.63900561646507	0	1.41959623442557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17435598-4	7.52171484985693	0	1.29887707657008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44480328-6	16.515579349476	-0.0830339661456634	0.482304303767712	-0.172160947967933	0.863310998429016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01538601315953	3.32400682845955
Merged-chr9-106234135-5	11.774487823995	-0.326209221682687	0.56171339757499	-0.580739613993518	0.561415958797075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84085771473249	3.0000504067923
Merged-chr11-55240812-3	5.09950040017382	0	1.33509516754142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111837025-3	5.4790601568484	0	1.33595185889807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35541685-3	6.32620250751198	0	1.29698189676123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75503626-3	22.1475219953326	5.11928398030016	0.972221364032966	5.26555388483171	1.39767315117885e-07	1.64562792318798e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.61155606730869
Merged-chr1-165769301-2	6.56148223024406	0	1.30653475029579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45395611-4	8.59733073101044	-1.01403329311382	0.638975711917319	-1.58696688184141	0.112520145593608	0.677659090213286	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6539911612683	1.86719832675847
Merged-chr2-58155849-8	23.1911705427248	0	1.28620478211631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70645520-7	27.4898869310771	0.0840961213895876	0.475250147936015	0.176951278720927	0.859546659503028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03612070939561	3.2040815619564
Merged-chr1-156860336-2	3.08527299572639	0	1.35402172911035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46308055-1	2.44797647200272	0	1.35526745776802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88087119-4	8.63521463927086	0.234347469522504	0.860852158216711	0.27222731253641	0.785447242217098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.965429723541064	1.46316345736407
Merged-chr12-12173252-2	9.58031822195672	-1.70986795014601	0.76132437376661	-2.24591252961801	0.0247096111692351	0.220764868945151	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23357815148217	1.91078234078169
Merged-chr2-73160966-2	4.20525698645912	0	1.33425965469627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159744879-2	2.26111203122469	0	1.63831520601857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19800960-2	4.36906413255392	0	1.35800679755183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40944101-1	3.34696803488335	0	1.35006011498391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97508731-2	5.50972538660883	0	1.34047579265794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183668042-2	4.60807393833428	0.112128848469412	0.869936030497709	0.128893211153998	0.89744214857398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36786140953366	1.31734301959449
Merged-chr1-164757290-2	3.4867423752478	0	1.42018191022543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55795635-2	2.85184208693611	0	1.42784975216761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72467700-6	19.9854468938269	0.247481939795478	0.392569703627697	0.630415280416502	0.528422915940654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35464796819401	4.45063652555769
Merged-chr16-29607298-5	12.134067736524	0.0174887266839929	0.544549985125608	0.032115925372689	0.974379603350581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24712906575878	3.57415274098327
Merged-chr7-98355459-2	4.31223509294418	0	1.31802365638895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75871303-3	7.23814498780804	0.315315409094093	0.680079321741852	0.463645047002006	0.642902074543085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95612424397953	2.00110701584433
Merged-chr17-8158885-3	9.17104816558921	0	1.32984995614122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4257216-3	6.84566297755354	0	1.30695791034463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110231980-4	6.29845210743691	0	1.30758723292346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117482480-3	5.29329343811073	0	1.30745359630698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116649066-6	18.9001836659941	5.98547439420445	0.915548192857136	6.53758528595385	6.2519994914927e-11	2.4031950515946e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	4.224286145266
Merged-chr18-34858167-4	10.3223213975846	0	1.29940110842335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180261971-4	7.09586031708465	0	1.30191465409533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89940605-2	3.71458244263746	0	1.32443901941405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9650915-8	21.9528233529414	0.203165713121743	0.371505982991268	0.546870635799474	0.584467610706506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3419092332713	4.44737919460035
Merged-chr8-124586824-5	24.1043694555618	0.357205910562978	0.320666708715298	1.11394759996779	0.265301667124861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5528768494354	5.96682765521638
Merged-chr2-155397815-5	11.8955793490378	-0.544941745132384	0.652711607517682	-0.834889005888593	0.403780205449761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67773728251625	2.63769060835752
Merged-chr1-78713249-1	3.05181195968052	0	1.31959450726995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45795331-6	20.7171466032071	1.58742922738192	0.46120748537447	3.44189822958541	0.000577647527478435	0.0122900555697808	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63067492882078	4.29193113863266
Merged-chr6-34629212-2	4.12482479819591	2.35244696473667	1.16244918829848	2.02369874607598	0.0430011576938979	0.33289345464583	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.82780788634396
Merged-chr14-78549046-2	4.28446817305171	0	1.33195106626354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-98034456-5	16.5836095296944	0.646895943916	0.434902254214369	1.48745134716441	0.136895644007218	0.777336005673934	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47134615826414	4.11995799417804
Merged-chr10-125274564-1	2.67839362398207	0	1.33196276049519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152573232-4	8.0794948600168	0	1.30196645778766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41024490-6	39.5006424007859	1.61376350585019	0.349662144235536	4.61520794416665	3.92701922392551e-06	0.000240191141956703	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82922085720137	5.43393923397304
Merged-chr13-58453192-4	8.7847670573595	0	1.29072057379157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88178621-1	1.94953536768779	0	1.5357225451506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146619747-10	37.4519743031889	0.0810082836849796	0.255002950611925	0.317675868026569	0.750730818215815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05786541273718	6.14208432215656
Merged-chr12-87325615-4	7.86209431170091	0	1.29557875380313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120197392-4	5.81519441565571	0	1.30061281386521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54879602-4	6.65651301392106	0	1.29446450065874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118676141-4	17.980567702373	0.937962182408969	0.536267829368804	1.74905547385337	0.0802814308430715	0.52634397309836	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4389268550738	4.57897570802206
Merged-chr4-55960225-4	6.68464273576339	0	1.29612439563703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129608916-2	5.98047251221368	-1.00439154924769	0.881648180438222	-1.1392203506261	0.254611259559044	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05407271394559	1.46261730325446
Merged-chr4-103285173-2	2.23625899939836	0	1.35644714415833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31700413-2	4.02153945163829	0	1.31932342021889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41614341-2	9.35765768171761	0.13535278868028	0.523373339497788	0.258616132052427	0.795931435024602	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80833469257835	2.91813342405864
Merged-chr19-53128665-4	6.94244892900731	0	1.31015697958218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5355556-3	5.66196268499607	0	1.30252193059642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17251607-5	28.5883782784099	0.0259257241646141	0.303655975914363	0.0853786067820568	0.931960400366636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29380994439047	5.32653392094494
Merged-chr16-49876298-4	7.29449918532402	0	1.29229635852957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82073175-3	7.09964533312148	0	1.33429600365797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95778989-8	20.3710887920811	-0.842091240149797	0.506903868508577	-1.66124445376086	0.0966643608368757	0.604462136195835	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19674157670172	2.27516042523556
Merged-chr12-70968249-2	6.48759383446661	0	1.29919395113414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60175359-1	4.12156303732294	0	1.31723450132631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54383943-1	3.17038086419712	1.30552958586729	1.242714483046	1.05054668926632	0.293466836692757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.581381506691384
Merged-chr5-98692225-1	1.25298945885644	0	1.74461731921842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5291723-3	5.70842626680233	0	1.33957994714985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111178089-2	7.33537176483386	0	1.3437067136567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21162195-1	2.40248185324578	0.554715902655259	1.11481251420115	0.497586720268169	0.618775365648265	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21697706044817	2.1359713465465
Merged-chr11-22813157-1	2.82088686762863	0	1.36938625433621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17868343-1	1.94603797410144	0	1.54838954225315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-35348945-1	2.75454646114191	0	1.34620292533278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85766224-1	3.74725633009911	0	1.3316638319261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58062702-1	3.81052901053731	0.518790573471798	1.11723292380928	0.464353101681741	0.64239478477123	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.666166562322424	1.62635771927786
Merged-chr19-45958725-2	3.0870937811599	0	1.40575296175614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-53806460-2	7.40343536235286	2.17746407819019	0.878319542598625	2.47912516183788	0.0131705080910531	0.136220326324463	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76344841879059	3.27776313352191
Merged-chr13-104976018-1	1.37651801381898	0	1.54515915480587	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79492704-1	1.71271451338256	0	1.56284871833126	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134818916-1	1.71850277327501	0	1.66866360857538	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47086811-1	5.3500203621465	-0.753260911850954	0.638936083500869	-1.1789299920638	0.238426053838631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21203973955296	2.24652561403637
Merged-chr6-82922839-1	3.79334291277112	-0.278321794725867	0.967555968064153	-0.287654465387385	0.773611248705867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80453935288625	1.90277810843129
Merged-chr11-101763866-1	2.65283818967599	0	1.35618420832881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45279232-1	2.0807559279661	0	1.43575654868689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-148821706-2	4.42733503794648	0	1.39780556294057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101569249-1	1.10359022508927	0	1.6728236423935	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99207549-2	2.44473943856453	0	1.55373656090257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85186598-1	1.65195918320147	0	1.76334655851701	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30608094-2	4.9940906937276	1.4098125374503	0.750040065277313	1.87964963835505	0.0601558434346111	0.42444317899322	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47738935185674	2.37475311282297
Merged-chr17-10354960-1	3.36970365931062	0	1.39929030977727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80949929-1	4.5129828107311	-4.25928527823483	1.15400994980123	-3.69085663340117	0.000223500088592196	0.00594901702205526	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1658255446307	0
Merged-chr14-122297052-1	1.47045244930704	0	1.47344607044544	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128412515-7	18.3822315553317	-1.43262127351671	0.505698755564676	-2.8329539231652	0.00461200333847066	0.061180667916302	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49246565823255	2.56846495047586
Merged-chr18-75917916-6	21.7937663340472	0.612245267946889	0.454709930242679	1.34645238035627	0.178156667923592	0.937118700968772	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76567997884866	4.46879413699452
Merged-chr4-119142400-3	6.28279158663158	0	1.29770898398496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66953296-6	21.7766720152816	-0.430584135574257	0.352388283178986	-1.2219025323142	0.221744487729038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12653912042112	4.65521593721042
Merged-chr11-115412873-8	25.5181568631258	0.605214654221788	0.390503541963222	1.54983140787693	0.121181986435948	0.715141161893208	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52277815965622	4.07617806220985
Merged-chr10-121630330-4	7.46443131258153	0	1.30088558720254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144335855-2	4.29409475587917	0	1.34707315465669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107342607-4	8.27836173085552	0	1.30487974358307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68392100-4	6.12862185053311	0	1.31342452125131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87652919-9	57.262504011152	0.87824217592071	0.322300056724374	2.7249209474132	0.00643168845228907	0.0790158138002033	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43849923286597	4.3477438050967
Merged-chr8-80020593-2	2.8768233925135	0	1.38489752036842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55390302-2	6.5139713063617	0	1.30689140576089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-12206173-2	4.51902081468394	0	1.33115789252699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100734283-3	8.66484033695807	2.47557461248188	1.18486725655717	2.08932654589096	0.0366783383693788	0.296594814884968	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chrX-77802663-3	7.55621246371912	0	1.30787597694973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19892343-4	6.49430392382201	0	1.32877925017155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134494397-3	5.68293778724393	0	1.29779681795372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10396269-3	6.66094410488056	0	1.30104340792207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11862961-7	16.6029415930877	-0.506668707016688	0.380518585613499	-1.3315215765343	0.183017450249447	0.955839058823559	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35115923250399	3.89223731386341
Merged-chr4-45546051-7	23.9572936705048	0.142768176200669	0.401637358189661	0.355465380123458	0.722240976271863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35118355093919	4.58632816081078
Merged-chr13-58452382-4	7.50302282838563	0	1.30246885338965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84255216-2	9.71948408853129	-1.39125591954199	0.672862728038492	-2.0676667937868	0.0386713664672446	0.308361087634969	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36776113051696	2.67319737171176
Merged-chr9-37247140-2	5.73312639667526	0	1.32040826998815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104507270-4	9.32419882681713	1.47171206917647	0.667550429976343	2.20464552652393	0.0274789784195863	0.239482705228899	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06302559869891	2.88549609683835
Merged-chr14-36316879-1	3.6354721842009	0	1.3220292783148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45546182-4	17.9265394954982	2.78909461879431	1.06488507860751	2.61915081244397	0.00881489673532472	0.100596968576062	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.26501898168246
Merged-chr18-33719410-3	10.7017105468529	-0.204764933998258	0.852796061151737	-0.240110084141002	0.810244916847704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62709434254231	1.08764913775046
Merged-chr5-24814180-4	6.87037561100787	0	1.31419079408286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40917894-2	5.40105014800071	0	1.29892198927774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117439274-4	5.68100736881993	0	1.3041271378707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4464896-2	5.05137694110867	0	1.32651208994313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94753156-4	9.20086206629674	0.264813708167021	0.589087622812408	0.449531950616708	0.653047964952218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82283186374968	3.22840787878693
Merged-chr15-4821370-4	7.30116573333256	0	1.31238597493212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148856801-1	5.39249279713398	0	1.31814522057977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5988622-3	4.96759264433466	0	1.31000945212721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46641298-1	2.81588697999792	0	1.33445427408372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107836433-2	5.88501174270654	-0.681255927687325	0.704904191201833	-0.966451804642857	0.333818152267969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24861141173777	2.34879464821968
Merged-chr1-180974594-2	5.1985617234921	0	1.31199724013193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107867243-4	5.18286685621595	0	1.30189834308505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99164060-5	13.246513572735	-0.475114928380943	0.431260484310777	-1.10168899230416	0.270596904130494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39600230285065	3.81823535195718
Merged-chr13-43752634-7	17.7476551688992	0.479465835749247	0.39859154165583	1.20290017634958	0.229014952102392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82161836331399	4.26893494447667
Merged-chr4-150371937-8	32.4679517404517	-0.757280644265311	0.312570877419484	-2.42274856351702	0.0154035839175151	0.152903325941659	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98570835091956	4.20210389574113
Merged-chr2-167804374-3	6.61347406540307	0	1.30831547827401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76239277-3	6.52402926768598	0	1.30732065358074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126820079-4	8.86763611157118	0	1.2919020886325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191131901-4	6.48420411502629	0	1.3142039246502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149780039-6	21.9899983577099	2.4055043987491	0.445759723272574	5.39641486917869	6.7985646116979e-08	8.92086351638576e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43148077988645	4.8866290655017
Merged-chr16-24819262-2	2.51911878522457	0	1.40285009799114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88449152-2	2.57723039377698	0	1.4856521843334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73710990-2	5.26525437224544	0	1.31415783835703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24859594-2	4.56856546963336	0	1.34724980958592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116172655-2	3.66289844755116	0	1.36049492288796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76176617-1	1.85788841046187	0	1.5396398288243	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60934845-2	3.75320109851752	0	1.36451334649362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-10324882-2	6.00808795950757	1.89542245673927	0.674490128347049	2.81015596386016	0.00495174976932205	0.0646895322723148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19904754646132	3.14228061785707
Merged-chr17-28810318-1	2.9129554336836	0	1.36025341918901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56691373-1	4.13849403257597	0	1.33440229060586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159607129-1	2.1508917344119	0	1.38376950390506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141551934-3	8.87157222690926	-3.25561111153768	1.06028039658406	-3.07051900801559	0.0021368708414317	0.0341046888118495	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64773378006274	0.306240821987646
Merged-chr12-35050696-1	3.84407309439031	2.15179211575844	1.04888898183623	2.05149653873894	0.0402186163607356	0.317521037966204	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.87496859647037
Merged-chr19-53566424-2	4.58582950198291	0	1.42841593993919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108235532-1	3.44079743381285	0	1.45054436135768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91398760-2	6.00612760840668	0	1.29937470280098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71798820-4	11.8488080574296	0	1.28961412389785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35023850-9	30.1349398810649	0.647163016067301	0.379158823460484	1.70683886546754	0.0878520063483308	0.561928313189472	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20663561622289	4.90530039834814
Merged-chr15-59819285-5	17.6864712844772	0.810035150591551	0.467715587697324	1.73189684478883	0.083291930637107	0.540549657305829	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07226198516549	3.83967393430949
Merged-chr7-129995724-4	7.93409924889428	0	1.29797252031895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167497481-4	7.24912778370347	0	1.30337607641316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36572366-3	4.96016710577454	0	1.29659598125933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98515030-4	6.84186973407038	0	1.29629342984283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51475929-2	4.51813554031157	0	1.30915062894489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80176911-1	2.89392811749728	0	1.41429821527295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34149824-10	33.4294339102322	0.03397144037023	0.373869159008265	0.0908645165071747	0.927600245244535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63462692158239	5.46842792077961
Merged-chr13-18779815-2	3.55483531719323	0	1.34421934252226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171932710-2	10.4993607822479	-2.10325958160048	0.547746814495684	-3.83983900214366	0.000123115020497318	0.00374189494391523	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99232291352814	2.84490649468151
Merged-chr2-91101557-4	6.93000158958678	0.901626226658689	1.27865284773096	0.705137620628365	0.480724596505748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	0.61242769162773
Merged-chr4-19879879-1	2.54135659483186	0	1.34703219948776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115746627-3	7.0469246179614	0.87845366753204	0.897810006600955	0.978440495286751	0.327856508019571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27996177005281	1.67453645373796
Merged-chr2-119243442-1	4.03821313145482	-0.425100439698698	0.819737227692077	-0.518581351850451	0.604052716077253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41719875562047	1.87552666999187
Merged-chr6-97497588-1	6.2965350985392	1.36293571608279	0.747226573088794	1.82399256820974	0.0681531957900325	0.466241492053545	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32557651340574	3.12112164905459
Merged-chr2-84642304-3	8.37609212891488	-0.569194580673661	0.725233949930562	-0.784842712793795	0.432545793605171	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53222543575902	1.77530737790309
Merged-chr4-149706167-6	22.1273787573774	-0.32201123652009	0.381710002177867	-0.843601778006438	0.398891970404788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10216852327751	4.0134657775943
Merged-chr8-26723330-5	17.2521888783823	-2.79406810911896	0.638279215518245	-4.3775013210329	1.200476337599e-05	0.000584547889394517	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40417080963436	1.21171060354126
Merged-chr6-54143569-8	19.1829102425196	0.279523656294075	0.394683573001446	0.708222169391	0.478807301022863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02788889934117	4.15037898023027
Merged-chr2-102818879-2	11.7824712557042	-1.93339043752796	0.659985823982763	-2.92944237174774	0.00339570772525787	0.048691510019439	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1076545682058	2.10711476373801
Merged-chr7-125393807-8	18.396392830263	-0.0137010387740257	0.377482919927105	-0.0362957846587377	0.971046511081863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38236497531251	4.47964546102193
Merged-chr8-123360781-3	5.95023123529655	0	1.31251033629864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100391796-5	13.3828534384183	-0.457933020431381	0.461110805603611	-0.993108413132781	0.320657124456738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58564054641676	3.09760506888322
Merged-chr13-109229384-1	3.37605774199299	0	1.32667347432675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117224533-1	6.92561817472439	1.29312315122778	0.790422301535387	1.63599021525064	0.101841635252599	0.629904732344186	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69068345283965	2.93807335876715
Merged-chr11-97428316-8	22.4381148954072	-0.535490924946571	0.421821026834643	-1.26947423404876	0.204271974549846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23152998386013	3.72308274648714
Merged-chr3-55293215-4	6.08726143483802	0	1.31739714250422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-11178145-2	7.48754768135668	-1.67564422577657	0.962829075331583	-1.74033405171058	0.0818003781474111	0.533838760653223	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5512464793142	1.19380919831911
Merged-chr4-63288668-3	11.2582675259202	-1.02711437917108	0.631212174517563	-1.62720939271507	0.103692633548624	0.638494248337515	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46373423753302	2.27643187026249
Merged-chr4-59864929-3	6.25348187560994	2.45829978861026	1.18597944570492	2.07280134365996	0.0381907713482898	0.305594192624195	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr11-76440030-3	6.6228725019501	0	1.31697387470317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88543087-2	5.29187957676575	0	1.30958578069828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60962828-4	7.67889357366253	-2.4794960043698	0.741354780562263	-3.34454713098266	0.000824170250122126	0.0163277153790927	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87898168151564	0.900948542443349
Merged-chr4-129003909-3	3.85959009638728	0	1.38020150854308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75874734-3	6.10927144165338	0	1.32745625997621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151074630-4	5.83147283659436	0	1.30650405006785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66246133-3	7.64720673673709	-0.704523306901267	0.655478648022087	-1.07482266436469	0.282454131289942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98399727798609	2.0900981927122
Merged-chr6-128201554-4	13.8215376067752	0.993689502948443	0.364238516495094	2.72812856946123	0.00636947769553263	0.078413694327859	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07815261489739	5.09063151079266
Merged-chr8-25982342-2	4.9084995758775	0	1.29964681005944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96829014-2	3.67268507395899	0	1.3210438282098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36188361-5	11.1677444038633	-2.53751649957366	0.910370760287043	-2.7873440253876	0.00531420295594068	0.0683034834236985	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82454364074909	0.683637474991079
Merged-chr7-123465846-4	7.53392215227613	0	1.30352821242434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62929348-4	6.03193271829217	0	1.34556668247393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59735630-3	5.72404836932612	0	1.32234471661304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123926295-3	6.44647507065323	0	1.30367179986309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119498916-6	12.353880773217	0	1.28015835687477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65418375-6	13.0878073096988	-0.225025103792313	0.520190244504899	-0.432582321889725	0.665318234621907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27611382151664	2.68622000886725
Merged-chr9-41072907-7	16.3267553777667	-1.16246512322335	0.511262143993486	-2.27371640337636	0.022983043273266	0.208967572802955	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78169246792817	2.72399108422369
Merged-chr4-101314761-4	5.16167135418883	0	1.31101090175996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64824887-4	6.18452556500932	0	1.30868772863071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80995395-4	6.2289015971743	0	1.29976347914159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94279756-1	2.67906511977533	-0.726942230595859	1.23147892170133	-0.590300181176924	0.554989417944742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05568487314991	1.72320011534497
Merged-chr6-135417599-1	2.62100051218303	0.83705104908695	1.23109367734772	0.679924740487905	0.496552115382014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40685209581508	1.69895031910627
Merged-chr18-11652186-1	1.67467398274669	0	1.4057211266662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56958899-2	2.76516936050655	0	1.38471451306527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43297471-1	1.62569032724369	0	1.5247751571602	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26572076-1	3.53880191943761	0	1.38572542666445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12315490-1	1.84177299147451	0	1.41116318788736	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104383615-2	2.87199281031651	0	1.36383767898092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53855567-1	3.19554995720802	1.67124847084739	1.13531452168147	1.4720576887999	0.141005299925229	0.793705946155055	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	0.958904680953568
Merged-chr1-151511034-1	1.46127961594848	0	1.44847798656225	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77434756-1	2.31348273979198	0	1.36093116035411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80622795-1	1.10961202654105	0	2.43627246624675	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89674403-1	4.00101727826299	-1.85860500934124	1.04790501527623	-1.77363881482265	0.0761229130153511	0.506529926228891	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92916766402723	0.729295484888209
Merged-chr16-10873809-2	4.19461865299508	0	1.3078022456116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61321221-2	3.85071786031985	-0.006275025590416	0.869887995905133	-0.00721360177396945	0.994244428433015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79824603062767	1.31734301959449
Merged-chr9-61435272-3	6.39547601077987	0	1.33380205271433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-131813579-2	2.54708136666557	0	1.58312909638132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21144404-1	1.99214861241845	0	1.42464116030445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72929334-1	3.01627499668484	1.09996851137751	0.84722813903544	1.29831442169734	0.194179312675242	0.996688505700757	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26796860891412	2.43282905033915
Merged-chr7-125581085-1	7.01324654618123	0.563883332304375	0.618675225363098	0.911436742878194	0.362065301319718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84943886720867	3.33300677508841
Merged-chr11-115192016-1	4.82199470297819	0.950694457960598	0.791309243282213	1.20141962959675	0.229588465442968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42305837348299	2.23802038785844
Merged-chr9-47581705-1	3.05146804548514	1.29205526425333	1.33723583926116	0.966213457879808	0.333937380058676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr2-49592157-2	3.33942765095919	0	1.39665598444499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23942395-4	6.08249959595044	0	1.2990170589994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31298046-3	5.71456239203074	0	1.29946608593751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139616874-7	19.4836006746844	-0.271328213464983	0.4245432496529	-0.639106177490321	0.522753861484305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6054995803122	3.31968878191574
Merged-chr9-109118259-4	8.93777626251201	0	1.29147089006016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23450673-4	5.82713310349883	0	1.3124543388117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84646282-4	5.45263021494041	0	1.31508082089502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34792822-4	7.03129027213828	0	1.28982540215453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84784710-4	6.1112601234664	0	1.29834021050829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118095200-4	5.28880756235879	0	1.29989858286468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97714871-3	7.45345024237174	0	1.30338811717574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50690519-3	7.15888236010995	0	1.328914077822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119181575-8	38.1550283200571	1.18105119457669	0.341740318791848	3.45599020552228	0.000548275243163599	0.011797034586687	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46759712419405	4.59117501429847
Merged-chr4-101670034-4	5.31357110913664	0	1.32702594653961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24311421-2	3.86936578630277	0	1.31638692292525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127041441-4	6.49078025451134	0	1.33422395749423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11810612-3	6.14271430297689	-1.29821111954662	0.898022765003252	-1.44563275023648	0.148280235743245	0.82226071663935	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66757674281742	1.46928333126936
Merged-chr8-92846790-3	9.38102977644548	1.84225457360199	0.640362397389833	2.87689374190484	0.00401610806544401	0.0551569141749693	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35548392245748	3.03433956146572
Merged-chrX-17564949-3	7.34900447907129	0	1.32047163411148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130816325-3	11.0572030510575	0	1.30116859288049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152757218-4	6.96964845288077	0	1.30413323953727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184562481-6	13.8785410177825	0.629843588884013	0.504069244051914	1.24951799046709	0.211475677582519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55781414169621	3.16547705738156
Merged-chr14-118431668-1	3.3507580516362	0	1.35439954023075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70969213-2	6.19858467952438	0	1.32114984617512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82223621-4	10.49178040679	0	1.29274433481408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115105338-4	7.84503549078906	0	1.29961816059669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131277244-1	2.88818058473701	0	1.36467342878031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96326607-2	4.40474346455732	0	1.36686037544445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72384355-2	3.58939449656241	0	1.34221159217933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101914264-3	6.64900937191914	0	1.30265255684391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33338195-3	8.44351926847658	0	1.31037718500896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58517416-3	8.04763759234399	0	1.31781821182032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86969824-3	11.6788432620754	0.227364714027363	0.53153845713783	0.427748380148544	0.668834322487082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23623278417922	2.89981315718526
Merged-chr5-136442384-2	7.54586318850657	-2.30576157362111	0.717080851960981	-3.21548339676845	0.00130225027744615	0.0233205937599331	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33501250040785	1.54028618764495
Merged-chr8-33629717-3	13.9706587646396	-0.563183078201385	0.401698537179842	-1.40200430441012	0.160913961328915	0.871341349924801	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71092625972674	4.03005388554459
Merged-chr18-75867908-1	5.81245282651434	-0.235657142124433	1.03384673097907	-0.227942048915956	0.819691292754004	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.936187638705818	0.683637474991079
Merged-chr17-74020700-4	5.39244108754478	0	1.29469374611063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66697826-1	3.86578934978549	-1.41703990488817	0.999379231670124	-1.41792010478351	0.156214091953409	0.853294830125176	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1972145473095	0.916190436775555
Merged-chr2-5966196-1	3.2938383070276	0	1.34732025724162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112137030-4	5.77499814320863	0	1.33460096821021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55681470-3	4.17563496919295	0	1.33205875121249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40638789-4	11.0417827522863	3.21976469644714	0.738302407808143	4.36103778396974	1.29447008460049e-05	0.000621060515038942	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.970635354461015	3.17783530413589
Merged-chr6-142710904-3	6.12021394522132	0	1.31575073809022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3658054-1	3.47030439937506	0	1.33539620855238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3482254-2	5.36718263293326	0	1.29809775009988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99296957-2	5.74735183392585	-3.55924218015288	1.01162126352325	-3.5183544558532	0.000434231936655468	0.00988687112637221	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72913769244513	0.729295484888209
Merged-chr19-37284973-2	4.40057518077431	0	1.33053048169005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101654860-5	14.3326864653414	-1.53587936432306	0.435507844965447	-3.5266399493789	0.000420868671931998	0.00965324122010122	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.485893080154	3.00482594997914
Merged-chr12-38767327-5	14.7108096086551	0.435371936217144	0.501122690092991	0.868793101618196	0.384960306958986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78241424058465	3.6292222440708
Merged-chr6-134521919-2	8.77142715805238	-2.54120518675757	0.951875323226385	-2.66968280903022	0.007592293121561	0.0892634016411524	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13474848181633	0.73596151290311
Merged-chr13-107809267-3	6.77252542567858	0	1.30968797399836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103703577-4	4.76549941277302	0	1.30913630305865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23719643-4	11.4151047246529	-0.0704782542105886	0.427739938148753	-0.164768935338646	0.869125855811028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15046727109518	3.99398068393232
Merged-chr13-13553886-3	7.04074481644929	0	1.30470340213667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89891917-2	7.32100825198617	-1.8306763121558	0.668481300223974	-2.73856024325951	0.00617088535555137	0.0765311585583336	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77869587441923	1.48233004913473
Merged-chr4-63181793-2	9.37258924509061	0.297985577050047	0.568755088702719	0.523925997268396	0.600330012072755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52144952526015	3.01927974294793
Merged-chr14-57772633-3	6.51232521850443	0	1.30013413470232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17909598-1	3.01209948815355	0	1.34148349714816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11795047-2	9.96563778747767	1.18316551633659	0.638511266520051	1.85300648301001	0.0638814294412405	0.444226443361424	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68510991868408	4.37597656452578
Merged-chr6-134517616-5	15.5330514074635	-1.29690743237337	0.580247926966647	-2.23509188417646	0.0254113170844723	0.225217404882942	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54574520333108	2.72673661893131
Merged-chr16-45301176-2	6.71661367981338	-3.42703184512422	0.778476082233696	-4.40223138942301	1.07143198304272e-05	0.000534864739220086	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41141632830128	1.15692263537643
Merged-chr12-85427950-1	3.30604017661538	0	1.32280665753423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104947624-2	6.17116792534692	-1.06814713242972	0.786652558605474	-1.35783850283696	0.174514934579969	0.923987434375516	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9434401678257	2.52863192190685
Merged-chr3-10247328-2	4.39045314961566	0	1.34746498904334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109139550-2	3.73146893814182	0	1.33493342198179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104710504-1	3.8553251878752	2.46412320675603	0.966516244843374	2.5494896954943	0.0107880699139019	0.117590861817153	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12300681171396	3.25210242546693
Merged-chr3-61393738-3	3.64955962718002	0	1.32027360949185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41283838-4	6.08272288707674	-0.438314247767428	0.817028236426248	-0.536473806198734	0.591631134293555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9585804095603	1.26501898168246
Merged-chr7-67528472-6	19.9928335820219	1.56709066077536	0.330013247355912	4.74856895391622	2.04861042914742e-06	0.000143481776101894	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00670344142409	5.57728539892342
Merged-chr11-29497160-7	26.15355351206	0.555281975577169	0.419906388259574	1.32239468391681	0.186036758159979	0.967663615276763	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38154725925061	3.99902798122142
Merged-chr4-32163035-3	12.1926420233569	-0.141377471933631	0.544685791612559	-0.259557848048649	0.79520485449882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21072054571158	4.15306395017539
Merged-chr6-97803869-3	7.38785973042894	1.30722260194521	1.32400591648981	0.987323837200742	0.323483908503209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr19-47440265-9	34.1349578055935	1.02689667380802	0.334255687173006	3.07218908522717	0.00212495073099534	0.0339612799437928	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41444236910627	5.40294738662703
Merged-chrX-48410311-4	7.04962556543971	0	1.30313986811297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8700986-6	24.051519871852	-0.0959197157606759	0.52390765487708	-0.183085157981096	0.854731201153162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48050299806009	2.63587540885343
Merged-chr4-149056045-7	20.8464944934698	0.036070649435842	0.339827570547379	0.106143975833806	0.915468120528777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74110119661317	4.80665169783585
Merged-chr2-164929216-8	23.9304780254012	0.416628781581075	0.322418972118113	1.29219685443464	0.196288980764702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24502599902372	4.52366906648384
Merged-chr4-24617059-3	4.90161264781622	0	1.30186071549021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81109920-4	7.50477928645391	0	1.28674069980855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-21474878-2	3.55162300083485	0	1.39511546904569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81956569-2	6.88462808525082	0.552591952247867	0.610001066004787	0.90588686322645	0.364995738237496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52624872241694	3.95365824654388
Merged-chr7-91598720-1	2.32490653184642	3.41093025110517	1.20230315328526	2.83699684375352	0.00455400621840807	0.0605095751012798	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.60230598860646
Merged-chr15-27688232-4	7.05608807816685	0	1.30784843476668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65534738-3	6.83341429856123	0	1.33963614533525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45917035-2	5.87530898854559	1.23278799725171	0.888147423420897	1.3880443322161	0.165123546087618	0.886765552485329	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	1.87744667331019
Merged-chr2-35732782-1	3.89776009759818	0	1.329407326293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17977840-3	5.77403281351731	0	1.29736163535404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84192865-8	35.3159347293021	1.29303464146824	0.366439185591982	3.5286472962201	0.000417689423096473	0.009600539233789	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42150603710736	4.60273912958851
Merged-chr1-23187951-2	5.82053658950021	0	1.32069710050382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8795544-4	5.09220844719085	0	1.31057134539179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127454042-6	20.3051430907823	-1.56169267417915	0.421767125547273	-3.70273684121952	0.000213286090298382	0.00574737849758271	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12533841939671	3.67871683593548
Merged-chr12-112743360-3	5.6086436607453	0	1.3138673454422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5582441-4	6.29473914402915	0	1.30172625634411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59821723-4	6.18913431301551	0	1.3067642083725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80059369-5	10.9124335810874	0.155790844779857	0.575041892839808	0.27092086110543	0.786451900000549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72514003542253	2.48319741580082
Merged-chr18-74869855-2	7.31018965843871	-5.40724150092689	1.01203836602976	-5.34292145676215	9.14604000904486e-08	1.14934063544432e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18030038430902	0
Merged-chr11-116018320-4	11.1034099051001	0	1.32616331962707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95843400-4	7.75502823016927	0	1.29585898839921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59044946-2	10.0956846132429	1.93264536924166	0.567339707558425	3.40650468051831	0.000658004222207738	0.0136172455577384	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19098891922638	4.15151308786779
Merged-chr6-26404073-1	3.28762108856974	0	1.33022085602226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33747633-2	3.45453218292081	0	1.35713143878202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-171633392-1	3.43986624846185	-2.36376797148226	1.1238852208366	-2.10321118888164	0.0354473126515457	0.290013783964932	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69075041153754	0.382164212378408
Merged-chr10-12940761-4	9.6267653277472	-0.276776052720469	0.551422590443385	-0.501930928324719	0.615716108596883	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55601481367282	3.85094572538454
Merged-chr2-93976700-4	9.15779160785132	0	1.30033670564583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86637062-4	7.47306378857066	0	1.29676354843825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30504243-4	5.4807253704494	0	1.30923594707184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128798411-4	8.15254022438505	1.74084089142308	1.1163205811923	1.55944530697782	0.118891019967435	0.705897777306649	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.989878296978726
Merged-chr15-6337264-3	4.1013953504105	0	1.3195240052673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31314216-3	6.09445645208711	0	1.30549638323102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132944243-8	32.3094250507467	0.278637144131606	0.397317602479858	0.70129574524887	0.483118468442673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9633981357203	3.51539668142405
Merged-chr3-144689480-1	4.26024195413237	0	1.3693189843293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8941895-3	7.17570890892082	0	1.31406420943182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167357084-4	7.797659115942	0	1.30644661210624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32077255-2	6.33308970043455	0	1.29281726361232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58348865-2	2.92839847962562	0	1.43997552464575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154584478-4	19.8036251463487	2.03392362635488	0.503305278885393	4.04113310883439	5.31935529987553e-05	0.00191198345118628	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61906215565114	4.20024268703897
Merged-chr18-83819152-4	10.8107820861133	0	1.28702498447892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96901358-4	6.29110632217693	0	1.29443249706089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16139877-3	6.13070234317485	0	1.29686568147784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103673803-3	5.92075674536774	0	1.32159978707471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35474830-3	9.65221182606697	-3.08376052641576	0.809304823760382	-3.81038199190173	0.000138752232556841	0.00410267121658794	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41926793912961	0.898163539755574
Merged-chr2-166430102-2	4.73945051959701	0	1.33424835611654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89910164-4	7.88167797875353	0.54788545393677	0.667966130843541	0.82022939283594	0.412085348873876	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82812911391455	2.16318252143804
Merged-chr8-71298701-4	7.334577217354	3.59814898492864	1.05188269242148	3.42067514833385	0.000624658981084712	0.013075054384929	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.6995072319729
Merged-chr16-23284606-3	7.7524925085851	0	1.30895425421569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120796420-3	4.73601791368074	0	1.29971137787767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12925945-1	2.35018791633457	0	1.41013987939916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73800062-1	6.52274639481424	1.39955103522073	0.628082660915203	2.22829115069248	0.0258611060710704	0.22840030271204	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56420362644263	3.76559319867749
Merged-chr17-24584683-1	4.06285604502484	0.515811360843209	0.772616387293264	0.667616386768951	0.504378494847503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08091781246946	2.39543092688359
Merged-chrX-20564087-1	2.4608421595291	0	1.41063439377972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84661282-2	3.44754713219638	0	1.33877065342988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111141217-1	2.60699783237499	1.40733788305495	1.10879716319587	1.26924736982424	0.204352850939432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	1.31470332505763
Merged-chr8-40322319-2	5.02137950811696	-2.76839630873588	0.983157735606698	-2.81582111239508	0.00486527488417726	0.0637637891258417	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12573914355733	0.683637474991079
Merged-chr11-97548108-2	4.24082434906912	0	1.40332316321632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101758699-1	2.23248918264394	0	1.4059406162011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36843921-2	3.36536882398291	0	1.35902481689673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105983634-2	3.78385839776963	0	1.33769506016289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6129948-1	2.96298287267273	0.226013606047123	1.24478967664069	0.181567706005617	0.855921994409513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7926165590021	1.71718321757245
Merged-chrUn_JH584304-90546-1	1.57241026870549	0	2.4332529691493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119977621-1	2.21244739282129	0	1.42998978256493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101722434-2	7.99924964505022	1.35956069322448	0.705622665111818	1.92675315072119	0.0540104005428016	0.392064389454556	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45921960080782	2.20722616279249
Merged-chr10-118050568-6	21.0107082943984	-0.0955214771858771	0.544599078385233	-0.175397794408877	0.860767073530068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5067617440779	3.38695093496326
Merged-chr6-15767142-2	2.12970132146882	0	1.50552025245438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45179805-2	6.13528553739384	0	1.31670493068631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140614878-4	7.39617569566147	0	1.29125734479637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90862107-4	6.94456127847672	0	1.3198982079656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98955324-8	33.953081626382	1.65636502926518	0.375246320020617	4.41407401190285	1.01443252268743e-05	0.000511095664051909	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85020858091256	4.53679646059672
Merged-chr5-117667051-4	12.0672484831799	0	1.28643168327813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47025636-3	4.9946326970028	0	1.34515362746337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122669269-3	9.85198127318872	0	1.29013464286638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77442218-4	8.35306115886098	0	1.30520938003754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21286897-4	6.88705039038503	0	1.33724978541648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63324267-4	5.24525052341998	0	1.3048427390581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99111925-3	10.7717682894491	1.7851291943043	0.575482775138905	3.10196807171757	0.00192238691217894	0.0315232861137378	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67379669436746	3.21745932519491
Merged-chr17-34388758-2	8.19378177073482	-1.14736640810306	0.605404418223145	-1.89520653230541	0.0580650450847278	0.414317365812035	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66469474682522	2.43545481046358
Merged-chr11-86658047-4	5.43341285098045	0	1.32238684739043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40992863-2	7.17261835282759	-1.65950909136769	0.740751755118977	-2.24030396134687	0.0250711962564934	0.22335410914476	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79963297953248	1.73054899258335
Merged-chr17-74159718-4	6.0194782097775	0	1.31365793882082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116666800-4	7.49554211297991	0	1.31834647684263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66998575-5	11.9669743470589	-2.87275798026422	0.743304959750781	-3.86484435840091	0.000111160059778108	0.00344749182072153	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72172577409118	1.92713101668536
Merged-chr3-62159252-2	6.61677018010902	5.81388670794877	1.10411364483476	5.26565968561947	1.39686838251049e-07	1.64562792318798e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.92569592639728
Merged-chr14-54750753-1	4.9088958517373	-0.229149054913452	0.808305930031625	-0.28349297759635	0.776798964033042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81515459330126	1.57612722179308
Merged-chr4-47294064-3	4.8927040416575	0	1.30301749949776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167163022-2	4.10618988180659	0	1.32231282767137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56849026-2	3.76839909132246	0	1.32247965948038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120033173-2	8.16902560134583	0	1.29433707890017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131094089-7	20.1874397602948	1.14065464787904	0.355008847386231	3.2130316083026	0.00131341834239454	0.0234392399436448	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67652036802142	4.7471547283845
Merged-chr3-18625065-6	12.8641057287536	0	1.29891673328332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60867914-5	10.5780560200204	0	1.2992732133636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57487855-5	15.8034092811688	0.554770807925528	0.457169900011855	1.21348935682586	0.224942781119338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82235740588656	3.70215824721949
Merged-chr2-73066752-1	2.29018663820449	0	1.40019644228655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51981920-4	6.40468571654143	0	1.29238097693566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118554577-1	2.37268537447777	0	1.47415946799535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66818305-3	9.26844559914863	-1.95299828062911	0.952009999141402	-2.05144723520811	0.0402234130977296	0.317521037966204	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21295238016229	0.683637474991079
Merged-chr1-138044746-1	3.54200330230931	0	1.38326404814706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10977806-6	29.4770089308956	-1.42120547568868	0.310967402303578	-4.57027156274484	4.87092614390812e-06	0.000283433250044363	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02777446963925	4.40479105236231
Merged-chr3-144603741-2	5.19065962265938	0	1.330596827018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9508546-4	8.99967561069196	0	1.31401052866654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57879399-3	5.61936313953993	0	1.30200792041033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89002703-6	32.670686315003	-0.0920217760888243	0.373759346848489	-0.24620595274672	0.805522807744981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11101362525552	3.98398819479159
Merged-chr5-32935783-4	14.0481502617392	-0.825505022480265	0.723917392144129	-1.14033041813687	0.254148669707237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43694451260099	1.51789747318134
Merged-chr4-134099464-4	12.3471561143435	0.692377180205353	0.643056632732908	1.07669705118014	0.281615630194464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2043835842872	2.35639125793769
Merged-chr7-98818733-3	6.69274863838143	0	1.29304696099539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104836410-3	6.16577701139869	0	1.33089835239228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120153026-5	11.39057548992	0	1.28762275840248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118567817-4	7.55562910697693	0	1.28821999173424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97767061-3	7.13070020847025	0	1.30557670202286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35986533-2	5.97938229165284	0	1.31371118170327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76332326-2	3.73799816209707	0	1.33295126652586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94709886-1	3.65272331970602	0	1.33400022545737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116801663-2	2.92549430211668	0	1.41762065762212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26928235-2	3.06207319025201	0	1.41146759604365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41547462-2	2.59900151404309	-2.30244625731337	2.15861034215157	-1.0666335708456	0.286137334886355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr5-105526767-1	2.41323932430372	0	1.36241721069172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62761033-2	2.99133743953882	0	1.35986206418938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191267903-2	6.05254161835595	0	1.3250122864386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47398413-2	4.45715775737989	0	1.36245424275394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64660722-5	20.5893802452077	-1.33189387630747	0.384505243207284	-3.46391603193159	0.000532372661830869	0.0115461081845337	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.39047741314758	4.03178215187086
Merged-chr13-76759404-2	7.58166338001429	0.334171267956131	0.868956814179174	0.384566025035194	0.700558969856195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28340682050196	0.843323834477631
Merged-chr10-60374420-2	5.42142269454388	0	1.30740364845867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38944976-2	5.30388708536066	0	1.30962531494663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45599912-2	8.14108081493739	3.08495733341341	0.932155442747341	3.30948808743864	0.000934667433278912	0.0180861054471554	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648127181902715	2.43491183200938
Merged-chr16-58556460-9	28.1432915574901	0.283031821290219	0.420615887287035	0.672898551492596	0.501011833790817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10195632533184	3.95584382157797
Merged-chr17-57284033-8	21.0012872265235	0.556014092081928	0.352974212782777	1.5752258152187	0.115204330461814	0.688696567409909	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2632931326154	4.8119680473258
Merged-chr13-113755993-3	5.20855017043554	0	1.34023933366646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94408865-3	4.89616404446766	0	1.31235733910698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91515183-4	8.29707106057253	0.235762581138481	0.579191944995739	0.407054316233999	0.683968095379124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16978221191019	3.36464606138474
Merged-chr3-96152074-1	3.57969986821027	0	1.32687975183337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103013471-3	8.9515418854435	-5.70415853454834	1.11384521192598	-5.12114113655445	3.03692234187761e-07	3.11051296790493e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14520137132799	0
Merged-chr9-106394860-3	6.55321496468117	-0.89118731100451	0.940791641992993	-0.947273839632121	0.343499257655615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67200741490816	0.851599296279844
Merged-chr6-125444083-5	27.9484861200254	-1.37072923505527	0.395563410141775	-3.46525790786357	0.00052972321228449	0.0114924611653195	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00469564905328	4.4661885372981
Merged-chr2-93507812-3	5.16619509297404	0	1.30432968684452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20355497-1	3.56739292691485	0	1.34342803146638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102534216-2	3.55207356947832	0	1.91439352899166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73106525-2	2.99012624528619	0	1.37104489042369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4151171-4	8.27254567323796	0	1.36552921944351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156324870-2	6.86213273132379	0.409609776556414	0.971165915519234	0.421771161869305	0.673192056867626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.880460860551173	1.15637648126681
Merged-chr10-88330927-4	5.31776874602375	0	1.32647259658788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26626802-4	8.02323822988193	0	1.29328443602159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-59174143-4	6.45523150337136	0	1.3240801663682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164862211-3	21.3722595665161	-0.661277218892464	0.354662055683857	-1.86452767724868	0.0622476385533916	0.435554209652497	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54490593592115	3.86343680983346
Merged-chr11-115743049-6	15.8157333471523	1.82192117399753	0.5280805021196	3.45008226337601	0.000560415752821808	0.0120127969075527	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7756754542177	3.89364381878442
Merged-chr19-42166374-3	4.35907720951627	0	1.31850777282809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37671327-4	11.4104023349785	0	1.31235400491735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109123370-4	7.27598431620584	0	1.30146325684869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46144615-4	12.8867579302074	2.14384409822199	0.679522941628319	3.15492526725405	0.00160539221585975	0.0273192603483259	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74929472298237	3.58250770945523
Merged-chr5-64410887-7	21.0230030018088	-0.360174838071297	0.420662007007708	-0.85620957460201	0.391881867511166	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03383880993212	3.60233872278206
Merged-chr3-146093489-1	3.61463409280036	0	1.4219276975365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93456323-4	12.0059101050681	-3.51531899777777	0.735193016384695	-4.78149128111189	1.73999551381345e-06	0.000126055151713585	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85489648647698	1.41293295987929
Merged-chr5-86114129-3	7.93509455829268	-2.62828591097259	0.755293647149534	-3.47981996259561	0.00050175083611581	0.0109987957520375	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74202506976307	1.29606516661881
Merged-chr8-104077204-2	5.51174718231163	0	1.33362679907364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122652472-2	10.8220343166326	-0.446817961640985	0.620288952321694	-0.720338416424441	0.471316657099711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23904060732019	2.01243752527112
Merged-chr19-32987915-2	3.53739155918678	0	1.31565885220782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66436786-7	21.3013876681936	-0.109627276358803	0.337174167194784	-0.32513545527784	0.745078556023335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3161605500178	4.08190042342732
Merged-chr11-33932021-4	8.70356935081101	0	1.31327240289571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-27185074-6	19.4478579324393	-0.912135043003985	0.414164755936085	-2.20234829239006	0.027640715378939	0.240635516540388	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.33522110563166	4.36192758144056
Merged-chr10-44632988-3	6.73613642136891	0	1.29508966558579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56163059-3	6.51047028608328	0	1.31427967002648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45661645-5	14.9032233297134	-0.83124987739925	0.593122965839194	-1.40147983685497	0.161070632915521	0.871806641141192	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45859021556161	2.42760559021134
Merged-chr4-48591066-2	3.83598756816976	0	1.37133455282733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10077310-6	16.1261033024233	0.0792866420677075	0.462060419322853	0.171593667737006	0.863756986027676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41330943657909	3.27358268966891
Merged-chr7-74974641-4	6.48435630979744	0	1.30165454895365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61649278-4	14.3483305150416	0.581026085738952	0.447483401730674	1.29843047472106	0.194139452794283	0.996562190282421	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04800304869447	3.53384860123218
Merged-chr11-117727321-3	5.24681914823845	0	1.3233299930525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60589554-6	16.8260585106957	-0.541895988285215	0.496308651215794	-1.09185279554919	0.274897808831449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38734630024277	1.84800290400231
Merged-chr14-61744074-5	14.6558218400709	0.0919606890783483	0.389202246756761	0.236279954303092	0.81321544076401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3460999856987	4.5681588226824
Merged-chr7-79924751-4	6.96321480388401	0	1.29226514707928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79838248-1	2.51505561460607	0	1.34762865022049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140844997-1	1.80564454924924	0	1.54943349315782	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-14669098-1	2.37224441328134	1.28464254294346	1.39056288452799	0.923829161008796	0.355575269952137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr6-134916976-1	14.4548861763133	0.48648654501242	0.520328904624598	0.934959677789581	0.349809079976212	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67148904160884	3.85236652265709
Merged-chr19-38973911-1	1.77807755676339	0	1.69639135873865	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80497028-1	2.49598451050126	0	1.35544335265017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20099704-3	8.75718687001556	-0.576159657959784	0.621680431633614	-0.926777856664696	0.354041884161459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.872548907582	2.49065419848114
Merged-chr10-25196519-1	2.20422439112504	0	1.42294685308898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83161727-3	10.9031253165055	-0.786084484606882	0.748891423541931	-1.04966415677328	0.293872548696864	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46170175900945	2.32843128278891
Merged-chr3-97963691-1	1.99023316318418	0	1.36564827262011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115079204-1	2.23514842546249	0	1.42362475704978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77717256-2	7.67434134616957	1.47488462832648	0.698614290197565	2.11115725661637	0.0347587973899384	0.285596425781832	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47573104985503	2.63600110697839
Merged-chr12-8854550-2	2.28674029611055	0	1.45990911074585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106763095-1	2.8464613911633	-1.95805171749496	1.22591532032607	-1.59721612498827	0.110217539534294	0.667414416404045	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02695868784662	1.66127991928328
Merged-chr7-99953852-1	1.55578778343807	2.51559807474587	1.37535613699819	1.82905213208001	0.0673917989008145	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr16-5444994-3	6.64691890445256	0	1.29991286806941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75858153-1	6.10385203089255	0.568160756001332	0.721040759262704	0.787973146736256	0.430712413325631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70321556409614	2.42194161705889
Merged-chr8-77421800-3	2.9237245232723	0	1.39961749811512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90415163-1	3.68232178185402	0	1.34326244929782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116206094-3	5.94186464229436	0	1.35147955886833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24373696-1	3.3791776588825	0	1.32361230898903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17469017-2	2.23040072926299	0	1.60064710871043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24339776-1	2.00559306810365	0	1.50412884209056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133816487-1	6.11427216344578	1.7889452455839	0.767728972320459	2.33017810983063	0.0197967394377055	0.185787409923352	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64443867012077	2.83042413708335
Merged-chr9-119265562-4	8.33912376248419	-0.545206031361087	1.21041533079872	-0.450428887910169	0.652401219115104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	0.306240821987646
Merged-chr10-69218757-4	12.1672261786395	0	1.30670346451119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9452577-3	5.76245406510096	0	1.30995691253666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48390107-4	10.8604878095334	0.336986508826627	0.931361630587084	0.361821335300454	0.717485547578983	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12671468907108	0.666688015277142
Merged-chr13-69525256-2	6.66835138878874	-4.68014895537643	1.04008916132177	-4.49975745293681	6.80310410124193e-06	0.000373262502602649	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14245279188916	0.306240821987646
Merged-chr3-51788944-4	14.3166766721622	0	1.29671047885609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18849510-4	5.64082685841016	0	1.30901471242661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100927547-3	3.88490618800756	0	1.31604967583116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28867759-3	8.80379102677622	0	1.29965057558174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29972955-3	6.22073417761346	0	1.32412557992079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123750481-3	7.42038487565449	0	1.3629181869489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90070755-2	4.79514631308978	0	1.3313229558099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103470694-3	7.42567086108353	2.8350411285755	1.14779242182061	2.46999463899456	0.0135115077005522	0.138868037464656	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.773587911294612
Merged-chr1-170218664-4	6.54408529048592	0	1.29775244295016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78048602-4	6.50142885275646	0	1.30064838839246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56173166-3	7.55161593634272	0	1.30133139232699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64038672-2	4.45016031175489	0	1.32751198950881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126803791-4	6.41272680508881	0	1.3000138444432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25466410-1	2.76209606981885	0	1.36775539092658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106328896-3	6.61960121704477	0	1.31827545246837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34727495-3	8.62606975819065	0	1.30434584269905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33746310-3	5.65070112055328	0	1.30780583383402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67291289-4	7.27813097446678	0	1.32304578569838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191329160-3	5.97644840071043	1.3097458895889	1.31968272855779	0.992470281868618	0.320968169367156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-80615625-4	8.26601481314932	0	1.31833684785982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87153104-5	20.403834954593	-1.18309019583436	0.467985385383084	-2.52804944937735	0.011469819601587	0.123071729340772	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24864064885747	4.16212329999982
Merged-chr19-11957575-4	10.0470229025804	1.22441597118606	0.94775558936814	1.29191110548065	0.196387931346144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784769569710081	1.19380919831911
Merged-chr2-124616133-3	8.29877622945609	0	1.30806810935865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157013205-9	28.9415630177953	0.130557611299787	0.25501886031598	0.51195276748559	0.608684066497665	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.49274239903322	5.63948166463469
Merged-chr3-8986075-2	5.42976154226095	0	1.32616129570172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-38902751-4	8.92385070806177	1.15010929386349	0.539818540006493	2.13054796867417	0.0331263999814183	0.276186996256856	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72060050242018	4.2297541645343
Merged-chr2-165333373-2	4.17778427818955	0	1.38311001123806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34710855-2	10.0404338847262	-2.54308523538961	0.697049680856858	-3.64835578471751	0.000263923983845738	0.00674491576413813	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99424766552134	1.27911570690487
Merged-chr4-139218555-9	24.2928804449355	0.121268047691869	0.471192182178972	0.257364303310551	0.796897556777881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43916998341901	3.80631644969051
Merged-chr5-93328280-1	6.39872715140534	-3.79709256603941	0.96142641791482	-3.94943647822233	7.83353952017828e-05	0.0026130192623051	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84907829634992	0.609949614787909
Merged-chr1-43321143-1	3.71349767897501	0	1.37147949209108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44832301-4	6.82281345865963	0	1.29731770726886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146948691-1	7.27206956946622	2.25655347258202	0.657755791470959	3.43068582875662	0.000602057444099041	0.012697558609517	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47012572522629	3.90999274462067
Merged-chr18-5834585-2	3.90125840492781	0	1.30965394925945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34340562-4	18.7219785736723	-1.10615448403066	0.454505252285772	-2.43375511826904	0.014943100833068	0.14919288520979	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22453213572115	3.27028269168757
Merged-chr10-18996576-4	8.06149853950066	0	1.34046838714907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66848896-7	14.4659659176671	-1.04350517045431	0.484987582976742	-2.15161213829335	0.0314279153079009	0.265574622230711	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71397570671317	2.76501444179017
Merged-chr4-149001707-3	3.93198153049346	0	1.3207178575091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128739512-1	8.36084634482603	0.130394572715495	0.612369234140059	0.212934558834599	0.831378006407423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0902839653809	2.71230632646541
Merged-chr1-71730389-1	3.0907417177634	0	1.43526177569649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81144688-2	3.90332494157673	0	1.42876850241232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43249325-7	28.8213771040763	-0.255129793252206	0.242510504726078	-1.05203604907912	0.292783010667384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32891131385704	5.06739673657722
Merged-chr18-67873617-6	19.0094603065194	0.926696173119645	0.654676298852782	1.41550285957127	0.156921110578493	0.85575834690913	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60043626844833	2.14016883463966
Merged-chr2-79698277-7	33.2728687275471	-0.971678417067572	0.548663082407916	-1.77099288839185	0.076561884332151	0.508832027257257	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77704337233397	2.15292080626044
Merged-chr17-25681824-6	14.7050818019251	-0.323605008157646	0.4621936882875	-0.700150210524625	0.483833501723845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30297567938963	3.78372581218911
Merged-chr5-43113585-7	18.0745446512843	-0.535753007872706	0.471405239891541	-1.13650202105511	0.255746520197886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90719184837436	2.89447108714726
Merged-chr5-124022515-7	17.2175552994607	0.878277013208739	0.351838306882814	2.49625181802977	0.012551346420857	0.131628997467072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92030539785403	4.74986914555747
Merged-chr2-26188762-3	5.70256314081638	0	1.32966868957565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35901907-3	8.10240876980492	0	1.29750641599203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36564723-7	18.2297047889346	0.132991205436003	0.451443947561078	0.294590737464722	0.768306538767147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96468309268824	4.18263333202392
Merged-chr2-102876399-6	15.2906751993267	-1.12742420879833	0.544172827529477	-2.07181276198003	0.0382829060624421	0.306235130316604	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79087884396821	2.89914403434115
Merged-chrX-159752095-3	5.21924826495301	0	1.34874924483236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62090389-1	2.77927940751671	-2.40206915901297	1.19853964007826	-2.00416329897619	0.0450525705888653	0.343925850198597	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29620764800965	0
Merged-chr3-121184655-3	5.01473489097498	0	1.33084580058736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4155727-1	1.81178631413198	1.27113582284938	1.41911325493827	0.895725424610083	0.370399428001827	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-87553886-2	2.75890639205653	0	1.38508498521611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82799925-1	2.94517041150899	0	1.43566777615563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164456223-3	6.1452710197083	0	1.31333348914427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36828198-2	4.25109642382187	0	1.33174678908587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103470666-2	2.56156247683634	0	1.46011549323897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47469058-2	5.41686008868466	-4.51706644106804	1.05034126665115	-4.30057028557016	1.70359126573723e-05	0.000776310145403524	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28168981715833	0
Merged-chr2-126478346-1	2.36941446403411	0	1.35424013887407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46724189-2	2.42595945025054	0	1.36294060707959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10742326-2	2.53849152428705	0	1.46023990037309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130965579-2	1.72973140331371	0	1.74588211205227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57023742-4	9.80225443131552	-6.10771533547179	1.01941377571077	-5.9913996465403	2.08042687191644e-09	4.68784739214661e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92348455871933	0
Merged-chr17-26571062-3	6.20912823807459	0	1.30937811858758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73338625-3	6.34731805244265	0	1.30191013141529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-93547307-4	9.5195224279474	0	1.29359520841287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90954913-3	6.68206106441359	1.40964588210395	0.838967493666504	1.6802151367551	0.0929154653077058	0.586406605755973	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.721334244049718	1.99596521771025
Merged-chr10-43841238-4	7.43798357461608	0	1.30051187612788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83178014-3	27.3757412846094	-1.92820618436402	0.520673934485937	-3.70328925005194	0.000212821990463492	0.00573723836172745	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23450032385505	2.43089370849363
Merged-chr15-79446022-2	3.75290129380954	0	1.32298555731367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55763314-4	6.92052993419753	0	1.30791127488662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80564356-2	4.85707772826153	0	1.31000381732967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64261751-4	7.94072843320353	0	1.29210718476681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50761715-2	4.10788298558676	2.81465994823438	1.20249908637587	2.34067533200154	0.0192488979114319	0.181978947181775	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr8-117371430-4	4.84273587606732	0	1.33283985536005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151981554-4	6.3207752692843	2.80562551685712	1.12785273231345	2.48758143370564	0.0128615004763347	0.133978576458882	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr16-32688963-2	4.24135113361997	0	1.33784215611348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153410363-2	3.42708983699195	0	1.36168951306584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10129842-4	5.68708817673287	0	1.30751002437296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75710406-4	6.45635297265743	0	1.33376237417135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65375527-3	5.93964315350752	-2.24559700024388	1.05405741723163	-2.13043138213638	0.0331360152213411	0.276186996256856	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72161622292274	0.733321818366247
Merged-chr17-26639921-1	2.54648716505094	0	1.41768271198527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47429604-1	2.6855297653935	-4.32848594770915	1.3540234744995	-3.19675842348975	0.00138981270009108	0.0244596554538517	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81097152206283	0
Merged-chr6-24984800-1	4.00049008700773	0	1.34915691970005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176832183-4	7.71803573265533	0	1.31591498293328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80720332-3	6.84407904985452	0	1.32148093238033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20361908-3	6.16920096724332	0	1.30830586688712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-67576915-4	6.44904463763002	0	1.31866584196015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69397356-2	4.48457537854392	0	1.31594391749113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25397131-3	6.37809539402049	0	1.3314552489896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67424091-3	4.00250557221913	0	1.31702165970531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144705341-4	12.7909780463378	0	1.30654126307035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85843423-4	7.91339132508095	0	1.28828699516363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115262076-3	4.9057310248995	0	1.31454239984836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105977636-5	18.9342835785675	1.00209221805399	0.489212054263546	2.04838006202143	0.0405227736027267	0.319074727538713	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47896274932841	3.70889516846249
Merged-chr6-116439717-1	3.09404488728424	0	1.33086001514049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81657802-2	4.86202969514473	0	1.31075226167575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64190991-4	5.4611164001616	0	1.30092966922519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52559084-6	14.1445010942611	-3.28994960289375	0.688635658951456	-4.7774894606869	1.77497350505239e-06	0.00012759892041931	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54492887399299	1.14490468848716
Merged-chr6-134042124-3	8.70161494706396	0	1.32100350394077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112366915-3	4.95334567823574	0	1.31784729104237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121651962-3	4.32563771674058	0	1.30898950253845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98105477-2	3.74461876370535	0	1.32587020643546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44441397-4	9.06919212043609	0.67877847832569	1.01975557223591	0.665628604350162	0.505648518386628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	1.11812572528152
Merged-chr18-21122143-3	4.96502343978784	0	1.31072956143405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102906443-4	8.73382665606555	0	1.29383087087237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32215358-6	14.3718368557604	0.140065865692672	0.364338617624767	0.384438703220107	0.700653319308907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99288975794867	4.14191325121471
Merged-chr13-9027466-4	7.60571744970783	0	1.30492118174434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9864997-5	11.1975638217949	-1.31688993863574	0.565074696202057	-2.33047055103819	0.0197812947274369	0.185727287796371	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07339551281129	1.97058611410777
Merged-chr13-54819675-7	15.5886788066955	-0.222095628943123	0.45436663641848	-0.488802678589651	0.624981401470492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1538853289099	3.91689998067127
Merged-chr13-52892154-1	3.08734711572288	0	1.34791575248782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82918828-1	1.88013227650049	0	1.46939888902085	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31994806-3	5.2830736917792	0	1.3248631707683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3816650-1	1.68528208863697	2.49083265127573	1.55125179797459	1.60569203176939	0.108341592924248	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr19-38361705-1	1.54783529239978	0	1.58980001976023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11941349-2	6.30111339531453	0	1.33012012075777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165800047-2	4.91395504169637	-1.15913905569426	0.969803723696188	-1.19523056817772	0.231996958509868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41372709851852	1.26501898168246
Merged-chr10-8893471-1	2.34311254847238	-4.0044831851363	1.37669033994827	-2.90877553864929	0.00362847272845544	0.050935806426133	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38254351154193	0
Merged-chr10-118604130-2	3.87983579461356	0	1.38834368929163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86139144-2	4.92919473126922	0	1.34346883136709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20892089-3	5.4563606632142	0	1.31823683088035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83076692-1	1.3930246975562	0	1.64358873994585	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55183494-1	1.50449141571184	0	1.4923811190628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101336998-1	4.72681844318213	0	1.32123659517986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-18782313-1	2.563450081709	0	1.33624891808887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174117158-1	4.9563487199035	-0.209595150182742	0.981913708743264	-0.213455773472192	0.830971481794164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39010999720866	1.95160684218358
Merged-chr12-70831350-2	4.27237294666685	0	1.3379335359292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17589446-1	8.8381921250063	-0.164542528272727	0.541415820304224	-0.303911563168342	0.761195268083082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22038812874184	3.48933577703069
Merged-chr11-11539220-1	5.13376586158376	0.079521135878584	0.691229242805088	0.115043072477487	0.90841098176536	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54657302789032	3.45488017194966
Merged-chrX-167203109-1	1.95649279657531	0	1.47049732571908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107731088-1	2.36298554896206	1.14370235877703	1.16533143164754	0.981439552488571	0.32637602946902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	2.09032553771468
Merged-chr10-77540002-1	2.65075172714465	0	1.39453562196049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96969847-1	2.14692235056619	0	1.42138788400403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106090589-2	3.43050204718632	0	1.33069321280266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95024559-4	6.7544653699697	0	1.30521567666379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111957909-4	5.80595473782214	0	1.2943927754104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75872947-4	7.73963218051429	0	1.29066244880768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93549203-6	19.8409069644918	0.39615650233545	0.336334527688179	1.17786450608702	0.238850627246102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33195273253788	4.62606653478855
Merged-chr19-47220417-3	6.20129978581444	-2.19411454643878	1.17525800979063	-1.86692158501405	0.0619125390884214	0.433766139087808	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15739180407335	0
Merged-chr7-113770544-3	6.74568702025067	0	1.31719661472797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22617757-3	6.16363516528224	0	1.29047705013437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177139828-4	7.64259820301335	0	1.31781178672617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58900058-5	10.041094807698	0	1.30783952204332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67207186-6	18.3419766930038	-0.800155022646694	0.50856366352956	-1.57336255031163	0.115634893321429	0.690874081083776	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68848844256973	2.57125221218502
Merged-chr5-35631421-4	10.8738615713764	0	1.30386393084199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82800638-4	7.68916591648309	0	1.30134027215014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123060958-8	35.8671779636151	-0.326237849127455	0.385980439915626	-0.845218605374847	0.397988796226176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33307710961102	4.07857293250404
Merged-chr11-88197414-5	17.5685033605376	1.38486148545047	0.403835036293664	3.42927522624218	0.000605195484527187	0.0127447966909164	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60126411415903	4.99924746568953
Merged-chr15-75873805-2	3.58596950045775	0	1.35969802128946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181237101-4	10.7019118470128	0	1.28816414238622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25083318-4	6.37147014673741	0	1.29441627184058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49272994-3	5.09982097335381	0	1.33674856713729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147471410-3	6.46030226448578	0	1.29714982492575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51844104-4	13.9665689343696	-1.13768271266433	0.440869505985807	-2.58054298883842	0.00986450736378997	0.109799266090695	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75474375641821	3.48320834846203
Merged-chr6-129917207-3	10.0101767264338	-3.60231820567333	0.716149205367126	-5.0301224642519	4.90166655416036e-07	4.58232192629703e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89653166195432	1.46316345736407
Merged-chr3-19474224-7	18.7747120812334	0.439421843686396	0.471445030810453	0.9320743988562	0.351298077590756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74034386045801	4.26367626507607
Merged-chr15-58791365-4	5.83600360590325	0	1.30189971939251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118470916-3	7.45642976331909	-1.21848585425977	0.577404854954713	-2.11027989079748	0.0348342546451793	0.286036592616723	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92059465216721	2.27386322119676
Merged-chr9-90257560-3	8.12378906598028	0	1.3064583812346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29787601-3	5.26912600011304	0	1.31525171471598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36266054-2	8.00474532003584	2.24373046352005	0.871869253572876	2.57347125652769	0.0100684009655835	0.111551327483387	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14223087710736	2.69893056290411
Merged-chr15-55106720-4	5.80111077321131	0	1.29916227761117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-91716922-6	21.9236346365424	1.18197576333863	0.403995592148595	2.92571450359756	0.00343666162692168	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37090789437869	4.224039487468
Merged-chr19-43930545-7	21.4988123452045	1.67642545711656	0.508725996083599	3.29534065493495	0.000983024354263068	0.0187936540238954	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38240965764727	4.382994001364
Merged-chr9-115458294-8	29.8144865303497	1.38409077338715	0.501266579831911	2.76118701919302	0.00575916870031272	0.0724424712012772	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49858558546708	5.13367531440498
Merged-chr1-13267646-7	14.5345106678459	-0.0887084301916371	0.50642965984548	-0.175164365804924	0.8609504833647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47442644616577	3.38478652860388
Merged-chr19-34511300-3	7.28152725053788	0	1.29655607804601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123903103-6	15.1726837279667	-0.261435109092244	0.463915061467864	-0.563540895320456	0.573066620847977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97259534034522	3.81440921806169
Merged-chr4-102511091-3	5.97781732913837	0	1.33514157421774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29707079-7	20.2134305598801	-0.036840199191356	0.374285710282303	-0.0984280141594757	0.921592430597521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84494409254939	3.23324022019608
Merged-chr11-88950335-5	15.097471806511	0.677384354634552	0.504017812516903	1.34396907770365	0.178958386441123	0.94020057246998	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20549426854616	3.64874990038956
Merged-chr12-86772218-4	5.85268398070262	0	1.30529568918265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23878456-1	2.37919610565285	0	1.34753985106904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59819671-2	7.10674742208699	-1.0891421783485	0.77807883183489	-1.39978384424114	0.161578057170008	0.873833651882065	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65909114424866	1.20440436174322
Merged-chr13-54342863-3	6.05477187669536	2.48882073770035	1.21675937407613	2.04545022682902	0.0408104914883143	0.320982390801455	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr8-35469159-5	14.1140677687125	0.451699800407683	0.383791890400122	1.1769394083256	0.239219691366392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2956313364945	4.72269767866636
Merged-chr16-59610960-7	21.9005690395437	-0.829471596156631	0.495397179691173	-1.6743567185298	0.0940605136295799	0.592431645651906	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46025213970873	2.8441881967244
Merged-chr1-173429824-3	5.31598544490823	0	1.31196626651874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11999212-3	4.85483637835709	0	1.31897038736003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148772934-3	7.34476437766754	-0.85526774642471	0.887387704650864	-0.963803917884132	0.335144242059251	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81825948717742	1.15692263537643
Merged-chr1-59496080-3	11.189083283265	0.91415393827282	0.758088699264646	1.20586672662389	0.227868881966097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90380393477788	2.01209236986533
Merged-chr13-52194627-2	3.39107165169874	0	1.39868009640246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3766444-6	23.8723240302121	1.12058674547602	0.430107436173643	2.60536473269348	0.00917765043075922	0.103812142123661	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2230848449777	4.33721507765715
Merged-chr14-19419631-2	7.85589872806022	0	1.3228454115326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6632687-2	3.58349027135013	0	1.3459699951189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5115265-2	3.6312861091967	0	1.3333812548122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102431704-2	6.64554985255489	0.61250376714901	0.951918257101559	0.643441558746848	0.51993762432258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.987850314215845	0.735627456805112
Merged-chrX-21740055-2	4.37581554345818	0	1.32171794635139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79243495-2	3.85051218921641	0	1.32628018773627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5320327-4	5.70530610081267	0	1.30822514398452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15189464-2	5.10311707067229	0	1.33744688072012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-67003313-2	2.71357594428861	0	1.40531332539457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89235558-1	2.97341101489813	0	1.41825205853021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21351484-2	2.95817729004494	0	1.34054239669119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122597490-1	4.67162860634527	0.0675634432776888	1.17922210431024	0.0572949260624728	0.954310262131114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	0.609949614787909
Merged-chr16-12589115-4	7.67061952201188	0	1.33203707373655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85413978-4	9.40439316057262	0	1.29861689409491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130838078-4	5.19162474254624	0	1.30860482562671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100531116-3	8.79825645063315	0.877944620489982	1.01552741256925	0.864520848599069	0.387301832433228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	0.989878296978726
Merged-chr5-36575380-3	7.76767910039997	-0.907927211296685	0.866410465192457	-1.04791810322259	0.294676340793364	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76694437805458	0.989878296978726
Merged-chr5-72195626-3	5.93372298678094	0	1.32583500679988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74454520-3	5.28923376919564	0	1.29492766407873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30407351-7	18.2085484971065	-0.348577954370554	0.515141487966319	-0.676664494150285	0.498618848941813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73746546937939	3.30286651899677
Merged-chr18-55204226-2	6.67115790385264	-0.424222733609084	0.52603643208166	-0.80645124127682	0.419982711441539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01245090871126	3.45384887345571
Merged-chr17-26501982-7	24.7978672564651	0.346802177645476	0.489085101760618	0.709083503866814	0.478272659156979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61131685627019	3.86530659721249
Merged-chr7-101616667-3	5.85699844001559	0	1.34699110291842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87031072-4	5.46874373665956	0	1.29999972941761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23969431-3	3.45586305995027	0	1.32410079260275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67414299-4	5.47649659803311	0	1.32590140224823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56883895-4	6.9689555831686	0	1.29629875781514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7598347-2	3.54856264831783	0	1.32780097633886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64040093-4	13.2103603453784	-1.02233673073242	0.481374195919235	-2.12378797907969	0.0336878766346665	0.279609803958963	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82199239177006	3.14529268526927
Merged-chr5-137075714-6	16.1884440605297	-0.681237511357972	0.43266999521007	-1.57449677329073	0.115372646918248	0.689639680343931	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40466646097751	3.44947228354175
Merged-chr4-150570060-2	5.53276271800717	0	1.31379052461915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133178084-2	8.04662549280257	-1.01681681743043	0.701157236328276	-1.45019799375552	0.147003314381471	0.816843416800308	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48779280182112	2.5824508526072
Merged-chr10-13682706-1	4.02920827164963	-1.16390443734719	0.769115168006709	-1.51330319016285	0.130202662739337	0.750813907462469	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55978239309997	1.52489444364345
Merged-chr2-3621578-5	14.5549181486359	0	1.27942852024027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102419166-1	2.00176272735676	0	1.51942047003526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118149717-1	3.43380750587695	0	1.35413787251982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84467580-3	5.05310518315771	0	1.31085396705134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28454844-1	3.21839602085757	0	1.3542624269017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145745789-4	9.13270519796632	-2.79996905063453	0.715028765193559	-3.91588309020906	9.00738916231237e-05	0.00291096366073424	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14954464058713	1.34574950999398
Merged-chr9-100458520-7	28.1467591107301	0.0481126869609931	0.336374864448602	0.143032943439045	0.886264163575284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55743630230372	4.425321870816
Merged-chr13-58601437-4	6.15008816298365	0	1.29682221334378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45414562-1	4.56762066293954	-5.34677255655114	1.0680953919509	-5.00589422709252	5.56032857074218e-07	5.06406435850039e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59151762106051	0.423054662900563
Merged-chr19-32330433-4	9.64569200029177	0	1.29032635595221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109455325-5	15.2477378073993	0.00275700026158622	0.492634512941407	0.00559644155892531	0.995534708993647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28218024374332	3.47573556487142
Merged-chr9-110888023-6	15.2926195411407	-0.999712472596234	0.494313419993998	-2.02242632338077	0.0431323279104219	0.333513797140508	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85717254317884	2.41413586417374
Merged-chr4-95195992-2	3.23935183771963	0	1.38084899549181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20828520-4	5.75317955864281	0	1.31163571034141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3148637-2	6.48095911971658	0	1.36300457218079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67342238-4	6.79204001417247	0	1.32181950350131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16468396-2	3.52225304775509	0	1.35691287969614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90292033-3	7.56351754666495	-0.360834291479362	0.835469657237613	-0.431893951328431	0.665818491152181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96828251681866	1.66014775609343
Merged-chr6-136847998-8	22.3402500687836	-0.520524460650748	0.347126341038828	-1.49952452208899	0.133737611977029	0.764828049410161	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89096245307436	4.40380933667209
Merged-chr1-120948574-4	6.38426693599482	0	1.30666868584896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35614265-3	8.86824653175548	-4.58246922139246	1.03358456946754	-4.43356969207963	9.26855277759166e-06	0.000475402550866958	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68676658189707	0.563523181795778
Merged-chr18-64847081-5	14.4603766851895	2.17407507414413	0.486201132631091	4.47155493525706	7.76529060036021e-06	0.000413217165774543	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6187042929657	4.59851487755596
Merged-chrX-74075054-1	3.90064915666927	0	1.33838582387038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46062978-4	5.01711507329107	0	1.31209464581646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100550472-1	4.66585344704568	3.43973173055898	1.08429162459236	3.17233081261892	0.001512206420089	0.0261074348024137	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.36155420913382
Merged-chr2-174085193-3	4.41827055417802	0	1.3278077432815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4492711-4	5.26263565313883	0	1.29963694828252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96690431-2	10.4887845072588	-0.907663821365756	0.663953270171659	-1.36705979493269	0.171606563937387	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77873457099066	1.83247173307855
Merged-chr3-116651191-4	9.42087838542128	-1.58519065298021	0.58843611712769	-2.69390441347812	0.00706204143380027	0.0846250995656096	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03826853614198	1.69895031910627
Merged-chr15-50745533-2	4.44820580077497	0	1.39144272246704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34700389-3	4.71350712695812	0	1.30317815283547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131702081-2	4.99288327964651	0	1.30947193268474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37356207-8	20.4704362689989	-1.35040292924287	0.478633306942107	-2.82137266599836	0.00478186169426165	0.0628839558036609	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83031555657652	2.19067769298368
Merged-chr19-32138861-4	8.56171781771647	0	1.30641025223123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19706647-2	5.18771622919589	0	1.30315696023344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34402877-5	9.96207409977018	-1.31092724811355	0.608597546774311	-2.15401336246215	0.031239124019995	0.264547165460522	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86380445382117	2.22281280114811
Merged-chr12-116461379-8	19.9812956485674	0.25347439354585	0.439772031303182	0.576376794119277	0.564360526247629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30916682728454	4.52893211101984
Merged-chr1-151564598-4	5.76515557593258	0	1.30614641519095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61666073-3	6.72187285986509	0	1.29500902054698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142361815-3	5.80968020186181	0	1.30076128487094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102437728-4	6.88856928461797	0	1.3013830768462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24152119-1	2.39319986648477	0	1.39737362308971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19844301-2	3.60423377902282	0	1.31829487726243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85671320-1	2.05272688240407	0	1.43976521871979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-51911486-1	2.01061685001563	0	1.51969490777528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103164736-2	3.69312787969576	0	1.38751738829223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106193381-2	4.65504191467831	0	1.33029778903873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171632703-1	3.40772836350635	2.85565525474324	1.09858336186953	2.59939787353376	0.00933874618759965	0.105233610687168	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	2.48586599042228
Merged-chr6-5323508-1	2.32641209335981	0	1.40654460089871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87901451-2	2.9670871186914	0	1.372888410323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139412613-1	2.36011701234209	0	1.37639046227979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8331090-1	1.6234266839322	0	1.76674488160929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28870884-1	1.83076892848873	0	1.61215968046315	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63327306-1	2.40133949249125	0	1.38047887907814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119210801-1	1.71144650801307	0	1.51970518191425	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24388030-4	6.4116735219747	-0.447428915332302	0.85263640220774	-0.524759339589267	0.599750500567363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46537515650388	1.63379099656069
Merged-chr10-8881466-2	10.8834304428918	0	1.30103257267464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36740148-1	1.68446770104524	0	1.40909064517558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92127001-1	4.53134900516476	0.689890102074771	0.889833057070017	0.775302846520891	0.43816072775112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14754575286313	2.48211543439749
Merged-chr5-89931721-1	3.50825383297177	0.0938741009170981	1.37770269305371	0.0681381414077258	0.945675668442717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr10-95532417-3	6.9345717518652	0	1.30350628144282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-109940566-1	2.65624938522922	0	1.34263329889566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62222929-2	4.53509779720946	-0.329723541757172	1.02902841967072	-0.320422191898918	0.748648304946141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89185109884902	1.46928333126936
Merged-chr3-127892723-1	4.73544249789816	-1.69216271558545	0.835966743966932	-2.02419860335065	0.0429497212386222	0.332692328598744	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7525969832228	1.04181016172925
Merged-chr3-109425715-4	14.4161476053793	-0.497384516306136	0.787679473289753	-0.631455475447143	0.527742752992792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64293555878257	1.07982873328226
Merged-chr10-68268813-6	21.5681841289963	-1.29889200299556	0.358123748156343	-3.62693624670909	0.000286804071117944	0.00721937551281708	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67831214596389	4.24137670046419
Merged-chrX-17518919-4	6.05463150703031	0	1.31152802605832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143679826-3	6.24921347014404	0	1.31352372767504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17065342-2	3.93876385053521	0	1.35562588158472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8494597-3	4.73759878667954	0	1.30132743524415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41300422-2	4.5772830877914	-3.24449299891148	1.13226092576736	-2.86549939600945	0.00416352067186651	0.0566457259678928	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88684311793473	0
Merged-chr4-149709139-4	10.4480736555228	-1.21943275486327	0.574752101414118	-2.1216673272929	0.0338656841741579	0.280521018958147	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08937412180892	2.45135405799759
Merged-chrX-155265557-5	11.468376271603	-0.563492583645261	0.55557346981641	-1.01425394526392	0.310461593668605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31731768713209	2.99624464073807
Merged-chr5-123150249-3	9.52637689982701	2.97522636382054	0.824419952839377	3.60887233936248	0.00030753088928022	0.00762363941233129	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.946751562957313	2.94234074878519
Merged-chr10-68397004-3	3.88646751539828	0	1.31794270064289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124729526-4	6.864215229542	0	1.29762784623288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118099836-5	18.4935231896662	-0.20874789927993	0.35463501224495	-0.588627439683664	0.556111222582799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37473598093993	5.10191015087632
Merged-chr1-171817174-4	7.77960690091954	0	1.29317606014989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134490201-1	5.66735924647848	0.0648266031909596	0.701506413992944	0.0924105637494738	0.926371846685335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37964484977045	2.18458548845848
Merged-chr19-55642089-2	3.52770484101538	0	1.31325895681693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116837270-1	7.2128472207138	2.18687946968727	0.576037481990618	3.79641870200885	0.000146801474783404	0.00429212043453975	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17736323560185	3.76921145748138
Merged-chr10-71383730-1	2.80226187987145	0	1.41027930419412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34171357-5	17.294704570189	-0.742929239062933	0.439984338731792	-1.68853564471032	0.0913084525532336	0.578723776968342	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25368323154385	4.51107848953465
Merged-chr16-76695083-4	7.48152313359787	0	1.30123746970271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35338388-4	8.31651335273159	-0.0931472365270699	0.673056264280746	-0.13839442773274	0.889928700666639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13762767619804	1.64143129445672
Merged-chr7-101538734-4	7.84725395743781	-0.234085079555034	1.23982565570829	-0.188804835968091	0.85024578145979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.382164212378408
Merged-chr5-21395358-3	4.22825579081471	0	1.31583844417673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71187966-3	4.40976389029118	0	1.33219739224728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90293690-3	6.82408708463178	0	1.29573310495006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21176110-4	8.42970482730463	0	1.31935044929282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41765043-3	9.89631193100834	0	1.32008811028691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52306057-3	5.15473870846555	0	1.32093042475251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118800315-5	22.5143101442237	-1.25037795629159	0.358762675279565	-3.48525095403873	0.000491675679056001	0.0108397567218601	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28278756473769	3.96943603198239
Merged-chr3-148322166-7	23.1373816907484	1.63687451557544	0.400071062495816	4.0914594156446	4.28666971861032e-05	0.00161543667492682	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14024903953256	4.73500458021609
Merged-chr12-100615369-4	7.87779426676159	0	1.29556556748049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11462370-1	3.70915658622216	0	1.33694539860599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-106679880-3	6.42575359845658	0.461572619322311	0.951464851222736	0.485117888200641	0.627592723711415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.914098845408867	1.11548603074465
Merged-chr18-53152088-1	4.62968049465847	-3.95251832183117	1.03092994522996	-3.83393492459813	0.000126109517562645	0.00380108511745783	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84426119623505	0.469435083901436
Merged-chr17-86967898-1	2.91689465484192	0	1.35849435892741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53184889-1	2.36673223169278	0	1.4000268420298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125558797-10	28.5939160178541	0.10941334213009	0.292506200888848	0.374054778317902	0.708363562146109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75524255873158	4.95048727893199
Merged-chrX-12948329-4	7.25314268455989	0	1.3100793324091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3497845-4	11.0189973298809	0	1.2975239666693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150504869-3	4.0656122050353	0	1.35348661247287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102002078-3	16.0242910039926	-0.0943518759445578	0.54887154432971	-0.171901562249473	0.863514918372431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74738792969815	2.94449388822159
Merged-chr12-78901689-6	13.5999005847481	-0.304604192468159	0.470962778077051	-0.646769143225847	0.517781365744242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6938907068489	3.39265810110069
Merged-chr7-37490490-4	10.514042230276	-1.36630343285686	0.699017045783153	-1.95460674542794	0.0506295045384436	0.374215089194563	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93403767506039	1.31734301959449
Merged-chr10-82083253-4	6.17065899519984	0	1.29266828159048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14873220-2	6.00596767155691	0	1.3396581996446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5491245-4	7.89357090347772	0	1.32625822258273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44504494-4	5.99086494314639	0	1.30480559971629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62844987-3	9.76822553506824	0.462932814337279	0.624374990757527	0.741433947851792	0.458430367275826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99109520010599	2.80820218063768
Merged-chr6-55123241-3	9.59263928664736	-4.89219533546689	1.03247249531942	-4.73832993871025	2.15486759407191e-06	0.00014791174138889	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60745441383468	0
Merged-chr1-170901743-3	5.75739112747604	0	1.3011687954409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45591916-4	9.23726791561429	0	1.28928966292537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113810260-3	8.86895807890603	0	1.31351889151329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127034997-6	17.2226407396599	-0.168307858127412	0.541888949861721	-0.310594741174111	0.756108725535444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09305678918719	4.59697270205924
Merged-chr9-13555826-3	5.35341664649907	0	1.31467210326473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100754309-4	12.8608334139141	-4.05807298339753	1.01648635640693	-3.99225524063303	6.54478716423793e-05	0.00226883640336494	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01916417221021	0
Merged-chr15-9463812-7	13.5702039532014	0	1.28022390064068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63558227-2	2.04720883189893	0	1.53598204869411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105340979-2	4.48925416947379	0	1.33368266035846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21823443-2	4.84037479449591	0	1.31881159596031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97487612-2	2.76750326829713	0	1.3242823264078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44187336-2	2.98111427501213	0	1.38537007793702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4135693-2	4.30869325158675	0	1.34144744345178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9565173-2	3.35475000852417	0	1.34214210240438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98969759-2	3.98865788703032	0	1.33518497115354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14974792-2	3.63051781076365	0	1.42057088311871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65717582-3	5.66597917401984	0	1.30247355969755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21462794-7	20.1409642565629	0.265639901489199	0.328867365631339	0.807741750171046	0.419239263936903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42712147472445	4.63739618603374
Merged-chr16-65629405-3	7.57711532416	-0.335661191937382	0.646556213077107	-0.519152372443991	0.603654488954836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5600245814471	2.26292282237182
Merged-chr3-81123648-4	5.57827786318678	0	1.30035346963672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116712434-4	6.42677681831601	0	1.31437694640555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96738171-3	5.51974562062424	0	1.3092918016857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71433120-3	10.640788190996	0	1.30454046250389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-81324664-2	5.01210736801332	0	1.35257522027286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18608994-4	7.37367140254984	0	1.29805420417122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8762055-4	24.8229254240456	0.0654389515662366	0.381752022947315	0.171417432345258	0.863895548615862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60439469400036	4.50737137228698
Merged-chr4-105149717-4	6.25672253952272	0	1.36494861243619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36683044-4	5.45859242281068	0	1.31524600937647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69196979-5	13.1736499345897	-1.07925436201618	0.546313432165571	-1.97552228898719	0.0482089077460407	0.361392599010299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79125274994456	2.36276638555688
Merged-chr9-41135054-3	12.660993393519	-0.4424608281401	0.511277010413076	-0.865403331518119	0.386817453091323	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51171498472473	2.84611264629958
Merged-chr12-51966680-2	4.62950855982334	0	1.33312986678103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116617854-4	9.2965140121688	0	1.2966633369782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97531204-4	12.9447587754569	0.131762108763988	0.371631534831309	0.354550398484879	0.722926441185497	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23937929314663	4.35872448200636
Merged-chr8-14813498-6	15.4314917719824	-1.66525429912612	0.65597001331274	-2.53861345081363	0.0111292712454377	0.120326498809459	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23856703540183	1.46894927517136
Merged-chr12-102425536-7	17.7954403568795	0.354992709078821	0.361463736718594	0.982097712765	0.326051712185884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3284028917037	4.49429033845999
Merged-chr9-32509990-2	4.514859943362	0	1.30496326930451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58566900-2	7.70776829254564	1.22142437290477	0.617654648055458	1.97751992436249	0.0479828906289388	0.360152764879237	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00097654600194	3.14944349338947
Merged-chr11-117864929-4	8.03551804937473	0	1.30093944502528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-92490061-1	5.34684258983147	1.92877435150796	0.76703455337468	2.51458600270619	0.0119172232514495	0.126624857006377	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67736679990789	3.45613225885439
Merged-chr13-45977101-4	5.35812430177374	0	1.34757804852195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126563883-2	6.86471013238317	2.0391885700193	0.893856277425639	2.28133831077663	0.0225284353757371	0.205807792263793	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	2.3356278069727
Merged-chr2-173785100-4	8.93404655814776	0	1.29334688897868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125620484-3	6.65221758394373	0	1.30072232320217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54985857-3	9.40206220628431	0	1.33394596183234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155757298-7	23.028185250965	-1.35934706531044	0.673313816973616	-2.01889079214263	0.0434985714775988	0.336027621678114	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79999224212631	1.31734301959449
Merged-chr19-34152103-2	3.64143107463049	0	1.36159685892074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87038753-2	5.65956131905415	0	1.35234567560623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117344602-2	5.02183458336798	0	1.31955498974715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93129442-2	4.52806779065307	0	1.31718010900517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88987726-2	7.02430677276631	0.865883918835241	0.904976956567265	0.956802173305814	0.33866711510257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02928942523154	1.36759862365701
Merged-chr2-132107799-3	5.83086083447839	0	1.30314136262353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168904333-3	9.89986904439197	-0.849236620485435	0.570978991660598	-1.48733426779078	0.13692654820663	0.777443932497214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34838384293509	2.46688859312676
Merged-chr4-137374331-3	4.85818852960575	0	1.33222094039076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34794047-3	6.50342556015441	0	1.2967883107645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40245683-4	6.79670555095089	0	1.30638420967577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12140193-3	7.90322700782279	0	1.31749915357746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32559997-2	4.82655858882576	3.30311640720958	1.02623374565636	3.21867841628709	0.00128782825578492	0.0231384177075945	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	1.75122680664397
Merged-chr6-70871681-4	6.58006124978326	0	1.30840926426704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38509031-3	6.51014719002334	0	1.3102580621684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91853776-3	6.64016664543798	0	1.29781210528897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86147451-3	4.66687770140391	0	1.35802110775074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109505091-3	4.44575280476924	0	1.32783090179064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117313332-3	4.73525497335919	0	1.3457336617194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155097010-1	6.6571140901461	-1.32885666314124	0.620888366413752	-2.1402505426486	0.0323345245404052	0.271585069488087	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70855599393983	2.07721457594951
Merged-chr5-125307772-4	5.9781918165685	2.41112053648558	1.20200485350223	2.0059158076279	0.044865231406304	0.343096946925259	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr18-67826195-4	11.8351505547668	-3.65521489967124	1.03332688226288	-3.53732682504753	0.000404199156582739	0.00936956299611765	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13784096934329	0
Merged-chr3-95666224-3	7.10306721217509	0	1.33117601465791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28408079-3	7.78658419871543	0	1.31187777079615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148914111-4	8.11649918105833	0	1.33757674566879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128338635-4	14.1090212906828	2.76641052598498	0.686383127821428	4.03041743576294	5.56778841895545e-05	0.00198273952057255	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09786053466654	3.59196204118832
Merged-chr13-21914682-4	6.16077720467575	0	1.31202920829525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30198881-6	17.6936207255215	-1.83080983378358	0.447068849316802	-4.09514068488863	4.21912107707168e-05	0.00159642551188376	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6733249584394	2.72875668119007
Merged-chr7-98314203-3	5.17705907460187	0	1.31381792604888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6154623-1	3.11167878038947	1.28766768317674	1.38298660271959	0.931077481621723	0.351813485955455	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr19-12734228-2	5.08940478953139	0	1.33705547964305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138506836-3	5.57443019328969	0	1.30743055201178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142475958-1	2.41506749369224	0	1.3824510121192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41962985-4	5.69725358380914	0	1.32170389770811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48704530-1	2.93762152327051	0	1.3867649740066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110464092-3	5.31895789208487	0	1.30518469662584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100319887-1	2.33463922884665	0	1.34503845111741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47273549-2	3.46255394237266	0	1.46754409000314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36129959-3	5.9948949199474	0	1.31221118986179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12026800-2	2.99268290292804	0	1.40337230819719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21363842-1	2.22850621006392	-2.59923183587525	1.16622719059829	-2.22875255938923	0.0258303730387494	0.228312127227123	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29118019563607	0.666688015277142
Merged-chr11-21262535-2	5.16775200573416	-3.80476392879668	1.06802656840205	-3.56242442029251	0.000367445711938463	0.00868708664700825	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31688595118522	0.423054662900563
Merged-chr4-54338666-2	5.13002331650235	2.10088217379378	0.803773139809269	2.61377504390394	0.00895479750540842	0.101926528094133	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7737814724567	3.73307160896138
Merged-chr2-164868174-1	6.37305400544021	0.687568577364725	0.790605716286556	0.869673167295334	0.384479040032816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92150425455285	3.17198420640041
Merged-chr12-111462389-1	2.27802329580629	0	1.427223585473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64625654-2	3.39953541795062	0	1.38321548425896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103016277-2	2.49371391511775	0	1.39097704312656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83730719-3	6.3009260870172	0	1.33895295436552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27960651-1	2.31559722588207	0	1.41885910880698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99379419-1	2.71897458057671	-2.5128648038957	1.02806191548032	-2.44427379913365	0.0145144066597314	0.146164034148067	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64821735811325	1.19380919831911
Merged-chr3-95969495-1	1.98741829841244	0	1.42400007641655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84443917-1	1.89948036525449	0	1.40598133489368	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54808347-3	5.36519547262508	0	1.30869690272024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105572012-1	1.74100313703494	0	1.61225019659235	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86190641-1	2.65229984512914	0	1.39390113011466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3776177-1	2.91044644730215	0	1.3493216046521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19712449-1	4.9042930659259	2.83993210405192	0.855812997189936	3.31840263395957	0.000905338795552325	0.0176156932479977	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.787956890688868	3.10080007254663
Merged-chr14-30325214-3	5.28848626213413	0	1.30267046449238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22814465-4	7.98517077244979	0	1.29581144298496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49364069-4	6.82660086921578	0	1.2980130223296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100531055-3	6.63949349062146	0	1.30724367376301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43581234-4	8.03518209510809	3.59970863232274	1.06755978931507	3.37190353959682	0.00074650588796286	0.0150931849488926	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.21171060354126
Merged-chr13-81371203-4	8.90014379528167	0	1.29330018098725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95417461-3	4.51498586005778	0	1.36878179773011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41122899-3	5.61714176273481	0	1.30145977247403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121440837-8	30.9838100069035	1.20367879683994	0.321123525756654	3.74833576582015	0.000178011843218564	0.00499028824837422	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85398259978804	5.13077418656547
Merged-chr8-70158644-6	17.3832614798617	-0.406058798727269	0.430863492227125	-0.942430273282979	0.345972394040534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70282270293352	2.70795950771182
Merged-chr3-116290276-4	7.8535085642869	0	1.30588118933166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35576324-4	7.92298193672498	0	1.30225139213389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26585549-5	17.7363757935092	-3.24717156395463	0.567786033501252	-5.71900570348826	1.07149198820501e-08	1.88219665218399e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.21735097000332	1.88639437725876
Merged-chr15-6337676-4	8.17651056081986	0	1.30549644381297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90244115-5	13.5497059062888	-0.520580465976264	0.846860769948789	-0.614717890412782	0.538741042821999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60961284740255	1.04220233489076
Merged-chr2-12024154-3	3.51177203808819	0	1.33777649193942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123855271-3	10.6491611368807	4.17871961528949	0.965946269463104	4.32603732463518	1.51815709096207e-05	0.000707095461625142	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.53716753364998
Merged-chr19-32952579-4	6.99764434606748	0	1.30799021335199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106961493-1	5.42903138059377	0.0313059381728554	0.766331828750112	0.0408516741682456	0.967414143684991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06891513226674	1.0995156753045
Merged-chr1-105795876-4	7.08855990587982	0	1.31987659106701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126667501-7	20.3001464366015	-0.896385690523303	0.378082695201845	-2.37087203910444	0.0177461737880214	0.170761518532181	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09746301817186	4.0955931709266
Merged-chr2-175141986-2	5.02066117117693	0	1.39087772168697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-33932806-3	11.6473083573369	-0.634861657792771	0.624521827342649	-1.0165563956253	0.309364506373356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68157970162763	1.84022605426951
Merged-chr11-31713288-7	19.8298091280569	1.39823506924425	0.541067575470519	2.58421523046974	0.00976008660936657	0.108948175533937	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48514449370391	4.04543959052249
Merged-chr11-100725098-3	4.52942338559073	0	1.31750726052422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92755407-4	7.42781078750629	0	1.33695874046472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79075225-4	7.91057677258323	3.77318631643342	1.05930654673537	3.56193995785436	0.000368124584190053	0.00869684348462878	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.47954504644696
Merged-chr7-135520411-2	4.89815750094555	0	1.31434673873363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78724649-2	5.21872712407984	2.48109165693595	1.19185220927362	2.08171083430559	0.0373688904153611	0.300690495392463	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr1-33983734-3	5.4035728669208	0	1.32659054692857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33517276-3	7.06733227456106	1.33965254894125	1.0931918330178	1.22545056455744	0.220405505342038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	1.11548603074465
Merged-chr9-77748216-1	3.85794862622204	-0.4003837077213	0.972183896516457	-0.411839477238782	0.680457083976884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6413872541246	1.31734301959449
Merged-chr8-40294502-7	21.9230039464852	-0.00654552880398487	0.373282160438944	-0.0175350699757201	0.986009755347773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74806249192504	4.55188250933669
Merged-chr11-113173014-1	2.35648993463685	0	1.44436495945577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46412145-3	12.4732563715212	0.704743853966093	0.384570432146693	1.8325482019826	0.0668697872272059	0.459772002961805	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50058864014417	5.12010665379862
Merged-chr13-95944126-5	8.19880964243342	-1.68822446723548	0.719026276859485	-2.34793153124973	0.0188779911657112	0.179146269345711	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33014351152567	0.843323834477631
Merged-chr11-58283622-2	7.23768833528904	-0.766006506166545	0.642568286089149	-1.19210132642661	0.233221516980615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5230363210813	2.30279743853683
Merged-chr8-90833216-6	19.3577118211623	2.38834562032986	0.533374045381105	4.47780622437927	7.54140062814662e-06	0.000404252075975548	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08572272103707	5.00719768790118
Merged-chr2-33427239-3	6.76877043813677	0	1.30716721970439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30689642-9	26.5606903106276	-1.60092761844477	0.475573796945636	-3.36630745580749	0.000761817454643081	0.0153552508917664	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2434423807297	3.03815873647658
Merged-chr16-30521873-7	20.9464542403519	0.836473867333514	0.424116620712519	1.97227325335242	0.0485784212252345	0.363370594480789	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15617960224671	4.80698405423482
Merged-chr5-114927893-3	14.0625288974642	0.0980663937305928	0.571434134869634	0.171614518185837	0.863740592933822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06102837217922	3.91286313414378
Merged-chr3-95643464-2	2.14483765616804	0	1.50931859110784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57526702-1	2.13781867237248	0	1.4513243989884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160175228-2	3.67756444179475	0	1.33772353640645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64301111-2	2.4319693588335	0	1.4439359269506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30258757-2	2.15284681179423	0	2.14811089392017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69527599-2	3.54441037647143	-2.45896081390041	1.28035482766674	-1.92053074723161	0.0547908932171552	0.39610197014805	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25762182619703	0
Merged-chr2-120661966-3	6.0260136039945	0	1.30888989277436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74876733-4	5.63836404285468	0	1.30393743226985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114594869-4	8.60092712578277	0	1.29286917077852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24120993-2	2.99225992413488	0	1.36597389028919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83067677-4	6.70104560413311	0	1.30765904917825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45003756-2	3.41119705362114	0	1.33487811751591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119436403-8	22.975286434746	-2.52217345720763	0.557323202827229	-4.52551310337155	6.02491480748386e-06	0.000337697148160908	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27527070038172	1.7337995627857
Merged-chr2-62685438-3	7.15994225288076	0	1.29923734391163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80575911-5	15.286549628138	0.352628250975291	0.545850080092266	0.646016669844009	0.518268559725138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43552349673006	3.19922831152576
Merged-chr17-86769866-4	12.4533088609354	0.0339822148821279	0.774441621751675	0.043879633955191	0.96500034941153	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44114051505787	0.793480537552656
Merged-chr8-116243218-4	6.83817991337788	0	1.30514677132913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-31299350-2	3.67681163972125	0	1.36346126406247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17219538-2	15.3077724784336	-0.163840852050681	0.459116798586304	-0.356860939427992	0.721195912668131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56707019166091	4.0154100047305
Merged-chr4-136160328-3	4.27933808077992	0	1.34002220680348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141281550-2	9.60422705220513	0	1.30818735240868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107516873-4	6.13956457492693	0	1.30436397335212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58260762-1	3.52623474938008	0	1.32194230688233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56774484-4	5.1156965989205	2.40519430857808	1.21191626805169	1.98462086200455	0.0471866694922977	0.355647070893158	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr2-19038397-4	7.39637839705069	0	1.30583191971552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104376988-2	5.00023881048446	0	1.33546740218346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-18957985-3	6.82661305858102	-1.09206452612334	0.753805787703517	-1.44873459973071	0.147411714004912	0.818555902733256	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3482397610335	1.27911570690487
Merged-chr1-57862107-1	4.83842427077547	-0.241878960235724	0.862438027587266	-0.280459525784593	0.779124973616155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94796313539096	1.40646071772112
Merged-chr7-90035232-1	2.71209207021801	0	1.35100348174565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69129853-5	15.9255114445276	-0.416772399948978	0.583441597224573	-0.714334394276241	0.475020429106649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67176708664799	2.30302996175038
Merged-chr6-134706680-1	7.32281226125263	-0.181135360637615	0.689933359291819	-0.262540371759297	0.792904864423239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60615165011976	2.06559681884521
Merged-chr18-53153266-4	11.7529283154731	-1.50637581709013	0.700253560694808	-2.15118622973579	0.0314615034845606	0.265618011201821	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3467463219956	1.92713101668536
Merged-chr17-43327461-5	10.9838718865987	0.668307251860481	0.549251518847024	1.21675995227719	0.223695561261918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4609576156969	3.27153531006637
Merged-chr1-43814411-6	14.4015844374054	0	1.29179217464859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61607009-7	91.5750290979823	1.82585958365655	0.350531154370775	5.20883682060752	1.90028140291625e-07	2.11183313868988e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45401452654055	5.22931472280133
Merged-chr6-129559461-4	10.8094086851034	0.807228079145834	0.515743757217598	1.5651727584659	0.117542407145143	0.699792833209414	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31468296221336	3.3949744081127
Merged-chr6-128134720-3	5.34610939299179	0	1.29403034619917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104367085-3	5.8890295033094	0	1.29617899060967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33606564-9	24.2634935010261	-0.365509280380549	0.423130841278014	-0.863820938404238	0.387686263698603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24856300042769	3.48260709252006
Merged-chr9-40787531-2	6.14353712841622	-0.724762096850948	0.737279915758533	-0.983021619550417	0.325596798325898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55179632166655	1.2679693671925
Merged-chr1-53818315-4	10.3022885288748	0	1.28492704018285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-1165737-3	7.20530838155541	0	1.31178435608632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96866578-1	5.68501854662147	0.20613693678524	0.811959737327412	0.253875810965388	0.799591502733326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48859329522537	1.39133106813974
Merged-chrX-47925049-2	4.87875104494339	0	1.31967360856282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83536739-4	5.56818219896879	2.48506095112767	1.20693561354315	2.05898386230594	0.039495784443416	0.313633677268133	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr13-44734546-4	5.67584476863497	0	1.33844149725238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177703637-4	10.9345051516113	0	1.30579281478598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59831686-3	5.66698274152966	0	1.29996508726318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139449263-3	5.06229144846201	0	1.31868748166459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46304929-7	24.7663898069255	0.101247105503913	0.344082575503351	0.294252347291347	0.768565082849177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37531334304579	4.36379855533953
Merged-chr12-82265721-7	12.3407812958751	0	1.28701122678588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50394101-6	11.3592971995766	-0.297140167165804	0.544707094333914	-0.545504492702004	0.58540659143572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58669738513733	3.13234382969968
Merged-chr17-73009090-8	20.8769824398743	0.406316287268296	0.471070328377367	0.862538484790329	0.388391264846145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41034123657477	3.07511588449101
Merged-chr1-106037126-4	6.75192616663548	0	1.29047239819782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71261921-2	10.6175261489617	1.01303210709846	0.616520147485077	1.64314517738121	0.100352899527377	0.622405141658693	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96089597634953	4.29901997744295
Merged-chr2-94144790-4	7.83876181972937	0	1.30391416846041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118470608-7	22.1974359383248	-0.00420603063086603	0.339058762783576	-0.0124050196972811	0.990102480153573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47900076841781	4.3471133078109
Merged-chr19-5692346-3	7.88684479539482	0	1.30170975432838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3719622-4	6.78243057465765	0	1.31140935164793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73908693-3	6.35669475758633	0	1.3153951484646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-22352968-3	14.0095828741065	-0.882847170847842	0.424663505104345	-2.07893346199108	0.0376234666011504	0.30214367070404	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54193127175782	3.52820916273701
Merged-chr12-79627570-2	4.1289412103075	0	1.33087397646755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86942906-2	6.10439362556961	0	1.35625599910371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65380647-4	7.47795280648695	0	1.30553955695542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88349357-4	9.12514772123738	-2.42180081411029	0.612740453346633	-3.95240888843397	7.73683911343916e-05	0.00258869169844749	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25158497055208	1.35700371934843
Merged-chr8-123248732-8	21.8607892175478	0.599003711905476	0.368890383602311	1.62379866359228	0.104418785387218	0.64207678083308	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64301556292906	4.41082348115342
Merged-chr17-52558796-2	3.13045230661087	-1.38572896838112	1.81328541455674	-0.764208964157948	0.444742725436008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75064386324957	0.898163539755574
Merged-chr13-24338042-3	5.06938329110175	0	1.30949802466389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11378845-1	2.28114448000159	0	1.5676176542295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145857666-1	2.55430085048721	0	1.37135554033017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133592052-1	2.31839964930878	1.53404070277286	1.48091218017309	1.03587553894895	0.30026021070253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0.905469781553611
Merged-chr17-29416566-2	4.27722356971486	0	1.3377391050249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100615761-2	5.70380305596497	0.530182854524624	0.818695343664957	0.647594808773697	0.517247055762021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63853509761749	1.68884729081939
Merged-chr5-113122552-1	1.49774077023753	0	1.72208700728146	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11000598-1	3.96021253204821	0.955376942180939	1.2173634892229	0.784791847824189	0.432575620605431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.683637474991079
Merged-chr1-152038502-4	8.60003864827577	0	1.29175984978369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3441774-1	6.58499357624987	2.36312119721608	0.778110568890779	3.03699922825208	0.0023894606753593	0.0371943061677058	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27066326150307	3.51388403976045
Merged-chr11-20762228-2	3.76501468293237	0	1.33644068830851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75264414-3	4.02037052279002	0	1.33443613333696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32508327-1	2.84506010164861	0	1.34712964865015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10978894-2	4.62512560229878	0	1.7871148437265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121686325-2	2.34733884398599	0	1.44502668618557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115372382-2	3.11794244803847	0	1.36450050760734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96301417-7	27.6843662816951	0.296707546660759	0.312134552783425	0.950575782190413	0.341819767274093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59654609212027	4.87426105719226
Merged-chr8-68348644-4	6.2463277704232	0	1.31475240115659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29430700-4	6.3927210886146	0	1.29471315559795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15804591-3	7.35213672746085	0	1.3059668424894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143043503-3	4.46460926128402	0	1.31390137325286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85072623-9	46.2975452774875	0.964172746931341	0.30492669110735	3.16198212570346	0.00156699182462219	0.0268616599611128	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68216279745546	4.70721260093139
Merged-chr2-70946919-2	5.68147590090338	0	1.33413956526557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87466214-4	6.08682450503366	0	1.28944030235982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19055664-4	8.20402608849435	0	1.29404158530882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163583935-3	4.32554008002732	0	1.30861638843136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71087695-7	14.5547780413404	0	1.28226412358736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53825610-2	3.89311507159213	0	1.33797738905206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121694118-2	5.44148872102886	0	1.30960476495563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125199353-5	20.3522943019092	0.578350311119717	0.469165201292371	1.23272209773142	0.217679464467469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33312822339925	4.96814161345766
Merged-chr2-157095412-6	13.7602832454104	0	1.28819267907444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105823704-7	15.9620702974387	0.278244821269931	0.521252403475544	0.533800553080779	0.593479531079821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56799482297081	3.27312904655309
Merged-chr9-56259661-3	6.12448266419902	0	1.30811303225419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70815895-7	16.2849413257226	0.490851013393423	0.428836229123893	1.14461181229073	0.252369996940747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80000260689363	3.44882099460135
Merged-chr17-31305039-4	7.59366790465566	0	1.29862055795669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100534553-6	18.5758800891352	-0.226582610936959	0.540733425644282	-0.419028305244839	0.675195446099552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1431962750817	3.44404647592357
Merged-chr13-101742870-3	5.53839830117615	0	1.30552558910686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25609558-2	8.17318626037777	0	1.30286248433259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99094777-2	3.41587679525715	0	1.34547327981707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70273177-7	17.2759276095624	2.0298818637802	0.444920136479494	4.56235107685164	5.05839713392144e-06	0.000291486789341473	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99169181666123	4.68700213047576
Merged-chr18-69300661-6	14.6593989189399	-1.15303704954623	0.509777829384824	-2.26184228321121	0.0237071493851975	0.213766715016575	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35331496923087	2.8948257788451
Merged-chr17-28012972-3	5.43167596240058	0	1.30330387961462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44258431-3	5.6620896139369	0	1.31398155321098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127634633-6	15.7571612133727	-0.995029952959335	0.430816836662661	-2.30963571588189	0.0209083305220009	0.19401814346644	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38560314718139	3.35944826533734
Merged-chr10-86977486-2	3.55655480267072	0	1.37395333997763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72295245-5	12.4967560409899	0.620394823372976	0.450016799980826	1.37860369523851	0.16801697661205	0.898097125046298	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15027362654414	3.88751210489832
Merged-chr7-125583430-4	23.6985206211917	-0.270922177318691	0.348302664153202	-0.777835501136232	0.436665996077615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29570222957888	5.05139022484406
Merged-chr4-95156959-1	3.98744511082418	0	1.33047200096693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106146559-1	2.08875345660564	0	1.39289953819559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35955972-4	14.6820336865611	-0.678484360816599	0.444515347883414	-1.52634630963192	0.126923641261551	0.737961763669124	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70256673296511	4.08803418449587
Merged-chr1-150015647-3	7.33784546059584	0	1.30756887752922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146343820-3	6.42635510706461	-0.55055521031367	0.851653959966542	-0.646454118918556	0.517985301525409	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12689572518164	1.88639437725876
Merged-chr8-25109436-3	4.56949466575219	0	1.33058371944759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101636923-2	3.5348761397138	0	1.34623457509701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8198620-2	3.71268401060269	0	1.34331308527136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34081304-2	3.54947679802278	0	1.35683958238996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88117257-2	4.57582651061855	0	1.35398585096869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50869658-8	24.244830040929	-0.0241417262706387	0.287634920377479	-0.0839318335859782	0.933110629308208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71915971245023	4.7194253761381
Merged-chr5-102001152-8	22.5138402682524	0.739403502909123	0.373032189845974	1.98214396246722	0.0474631303842025	0.357256279036567	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04079555700413	4.65673306264789
Merged-chr9-82871585-2	4.43506811459827	0	1.35434779560749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-100480522-4	5.54582098914087	0	1.32153904820544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108615977-3	7.35750792357714	0	1.32345992514185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121389181-11	56.2309054737181	1.10076601889648	0.261817074492698	4.20433243717717	2.6185383995958e-05	0.00108834032916645	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42738403599552	5.55557858655045
Merged-chr4-135256753-2	4.95080678411113	0	1.31940740903807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21495945-6	21.4579771923473	-0.421798393803917	0.524346737814176	-0.804426467040211	0.421150720826807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51494844928388	3.95990202131671
Merged-chr8-41395540-3	9.83593250637155	-0.360057652058506	0.459220897756822	-0.784061992425207	0.433003735786165	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50295797443428	4.21373065896852
Merged-chr13-30630230-4	7.44667487993918	0	1.31210836923888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101296928-3	9.07513245568855	0.51454685702316	0.522880545864652	0.984061964233702	0.325085047017554	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94608043571321	3.47935912293436
Merged-chr1-16685388-5	16.2050532434811	0.21945587935258	0.434774429928489	0.504758017597024	0.613728806028098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93968540076007	3.94267606351727
Merged-chr18-54983277-2	4.0051194101983	0	1.31497986718665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88368098-6	16.0661204867909	0.537864661073459	0.484902341079174	1.10922265270243	0.267334142648957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49656260953157	3.30895033782959
Merged-chr15-39616889-2	4.32756035591833	0	1.34726181931858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130804037-1	3.47470225024708	0	1.3360168667752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44404311-3	11.9315474420785	-0.857354664205954	0.445480668320717	-1.92456087362407	0.0542843182652902	0.393422025667366	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17423063241556	2.80950514011689
Merged-chr13-75825567-2	4.21171153410382	0	1.358161012878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84603949-2	6.44894781012652	0	1.34008093135259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90965881-2	3.45988572688924	0	1.32814121575392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79259072-2	3.31464499100029	0	1.37296260744137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88680904-2	2.3487367692087	0	1.46362883123047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85989228-2	5.43579319638828	0	1.31459408000346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50513014-4	6.73388811941061	0	1.3083994848622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45919807-4	11.5689038387026	2.41893904046403	0.560241059368453	4.31767540064066	1.57681092532395e-05	0.000728185771916742	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96369515785731	4.30700645782444
Merged-chr16-65351286-5	13.1133515077197	-3.42381128255754	0.947557045968357	-3.61330359699723	0.000302320372430288	0.00751728579027	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62108905818579	0.727201944460961
Merged-chr6-99242303-4	8.58715508137179	0	1.2962554450758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60541350-6	13.7711957930396	-2.64473066942861	0.831222032182694	-3.18173793166171	0.0014639421999231	0.0254964442121451	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38888992064792	0.683637474991079
Merged-chr15-3999349-4	5.4965790806524	0	1.29782372701901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67985238-3	8.24764491628281	0	1.30193897584686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51729322-2	5.89812180071224	0	1.30339291639305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78915909-3	10.8119611191772	0.417607559837925	0.58184598812482	0.717728691717538	0.472924588685728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18633333910643	4.5388097093617
Merged-chr12-27312341-2	5.32295792297174	0.570444855800704	0.648953611112211	0.879022546500737	0.379389051141562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12360896290304	3.8171813304822
Merged-chr12-31944038-4	5.84048836203232	0	1.31398977200272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25251935-6	16.0746325701811	-0.47607116508351	0.463575674863259	-1.02695458562173	0.304441849220774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10782164709831	3.69150946212828
Merged-chr14-79533475-3	4.58685658106339	0	1.30621068289214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13874987-4	5.52547090212952	0	1.31825917289231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121885668-2	6.2234884653457	1.82377600578605	0.967500099881186	1.88503960465742	0.0594244909776329	0.420709944466349	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	1.62306943957144
Merged-chr19-55233762-4	8.5014204172478	0	1.28587699072685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24894761-4	6.93144183479363	0	1.29395555155112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7333542-3	9.92530825870987	0.585220645099243	0.467602987049834	1.25153316233387	0.210740022479719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19259327056184	3.73310179926666
Merged-chr3-19011650-4	10.1069941986235	0.123021118196187	1.31714523132337	0.0933998129216052	0.925585939136375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr1-131126622-3	5.03588781679261	0	1.3159380885102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6178820-1	2.50357325587752	0	1.36006166759282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62045860-13	42.839431558988	0.199582987108627	0.294405972899032	0.677917588231389	0.497823947550037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77051568922547	4.9837785845541
Merged-chr13-93861451-6	16.0303462090947	-1.24074368949777	0.479545919775372	-2.5873303021303	0.00967228252813052	0.10824541429752	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1700564670219	2.95569619829633
Merged-chr5-64811278-1	4.79051725775141	0	1.35561596754004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133538292-1	4.83622380621749	-1.21804285982101	0.682669282868986	-1.78423563266545	0.0743853845092242	0.498031489358582	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85275086332716	2.17543988140679
Merged-chr11-3135751-3	6.84533815408665	0	1.31994672312093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24878014-3	7.2725929031085	0	1.3180101538753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95132154-4	5.40551590716137	0	1.30247119322639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125577682-4	21.7716042650647	-0.88821814141397	0.538369871819869	-1.64982884055435	0.0989779482264334	0.616040861492001	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17682652743565	4.24253549330999
Merged-chr6-120908296-1	2.78413578738201	0	1.3873662832475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70707451-4	7.63577737720329	0	1.29994646985031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43787673-1	3.91676332416505	3.37152208388539	1.11124884506481	3.03399377993391	0.00241339405811265	0.037502069884339	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr1-65060287-2	3.71054029171712	0	1.355393078627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30084306-2	3.9034344043472	0	1.35852215425112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76525295-2	4.69438969094647	0	1.31282595525832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45379760-4	12.7971328650859	-2.11907714557105	0.659993969700078	-3.21075228389438	0.00132388003322878	0.0235658579818491	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.02254338696271	2.47555738456387
Merged-chr13-64439286-8	23.8585836719623	0.923256890607086	0.32229986412126	2.86458976060792	0.00417549796405657	0.0567260062285323	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28968232182736	5.25479734175782
Merged-chr5-63837250-3	7.57995958655593	0	1.3166773806598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68317132-3	5.91185241500102	0	1.31919288477139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121429441-5	20.7508015367198	1.66388522775276	0.507988842777522	3.27543656009286	0.00105498806079707	0.0198329103580794	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21068755310759	3.97370322637382
Merged-chr3-88649557-6	20.3509645680626	1.20192965320647	0.466848926418007	2.57455803192806	0.0100368247718998	0.111314723615846	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90446442825287	4.88892965543954
Merged-chr15-26359005-2	3.21366290284497	0	1.39318328581706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35850535-5	22.1336504173495	0.216220662222864	0.503177155277207	0.429710808519805	0.66740602001718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35286511930459	3.51029633707071
Merged-chr15-60854376-4	6.35119523646975	0	1.30013248836051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25197912-3	7.44881808746741	0.306446940936094	0.663918115312955	0.461573398688846	0.644387274534042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36766231189643	2.21043983090998
Merged-chr18-55357512-5	12.5266339042776	-1.11831423055913	0.551707586216578	-2.02700535301345	0.0426618652348767	0.330993855284114	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57572092426791	2.11086637835816
Merged-chr19-10022634-4	9.57051691738043	0	1.33168744815544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123529813-2	2.81640524549861	0	1.45542760958641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37051922-1	3.10246238866667	0	1.36586970922543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110893627-5	13.0020905846425	1.6467858157933	0.729297443498108	2.25804413614069	0.023942907908415	0.215565343094969	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74419756702912	3.71013794855404
Merged-chr2-121419153-1	2.40647008847357	0	1.3893801053679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155193398-1	2.37649246805313	-4.61722445294221	1.14165310633848	-4.04433222956019	5.24724672720729e-05	0.00189196256956945	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3496571668691	0
Merged-chr18-84699627-3	4.62337136666916	0	1.33980407479699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113812235-2	5.23696688657902	0	1.37739859850822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113956047-1	1.69031338796618	0	1.51980680415203	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94223869-6	20.396603830555	0.302708975626206	0.427534769166265	0.708033585704664	0.478924400987527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98058177762829	5.17885666019522
Merged-chr13-60673532-1	9.42066387112262	1.495480748189	0.823150837869405	1.81677607479549	0.0692514076632234	0.471537808002318	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13007286805093	1.78348390616087
Merged-chr5-99423184-2	2.96011567492682	0	1.3959358292048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108417713-2	3.63467722300967	0	1.3621549515306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132803692-1	1.75490289441649	0	1.39743827909943	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120083304-2	4.51850819811575	0	1.32334053773592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160237527-1	3.23958117519583	0	1.38689819493153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17327170-1	3.62240967950052	0.935006043632455	1.1227101008841	0.832811642913132	0.404950967310514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84549803888929	1.23021119707292
Merged-chr9-64031987-1	2.30178490375548	0	1.47519990309523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49078920-2	3.41795513832549	0	1.3811374098689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80011026-1	1.16936392793394	0	2.1227344403628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4799376-1	1.72581291739166	0	1.43661701709337	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55652129-1	5.28460156768945	0	1.32327949704006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150251929-1	1.53485735261292	0	1.56101961011754	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110861311-1	1.77076626278545	2.68309473094197	1.5619143541781	1.71782449131396	0.0858286328818983	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.34574950999398
Merged-chr16-77282173-1	2.73746613977163	0	1.40460868303046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144283520-1	3.003236894945	0	1.36692160180017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8901669-3	6.8357318415649	0	1.33462015916053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24645343-4	6.47681797697876	0	1.29178321069837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-143321537-6	15.216929776956	0.0605955133090256	0.449964556627772	0.134667303049721	0.892874926034297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22455880494058	4.25790140270716
Merged-chr3-10273329-4	8.06155669653805	0	1.31240135586853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72201609-4	21.5113075683656	-0.096304714741666	0.451324037937632	-0.21338264006885	0.831028519923771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14621274169678	2.76632717035731
Merged-chr4-98189128-3	5.81012806105876	0	1.33621001262436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43681176-3	4.00514720743179	0	1.34411108265947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99955775-3	4.67271856113416	0	1.31612991681477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53020300-4	6.70405518951345	0	1.30573829119693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130811913-4	5.5131274135944	0	1.30166770741631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101801461-4	7.74888108722895	0	1.3134086639966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32779351-4	6.70538321197717	0	1.29336811509794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133108033-10	27.9847433644695	0.373043379030762	0.336676401972321	1.10801760041807	0.267854214825608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85406264729607	5.24512465932053
Merged-chr7-100505251-5	15.4818780394837	1.582527085536	0.523806451267651	3.02120579406031	0.00251770178693201	0.0387474660783936	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2934369404514	3.69356658215259
Merged-chr9-66082207-7	21.4393715831335	0.887336751645746	0.435380442424789	2.03807214376432	0.0415427185081821	0.324527708349745	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30161796464685	4.16888495999377
Merged-chr11-22632114-3	4.94569570652117	0	1.30853681052088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14045898-3	11.1691189513104	0.193149059492355	0.630652303610814	0.30626869732573	0.759400070689161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00447691929615	2.04155727848712
Merged-chr12-100422771-1	3.15757792458748	0	1.37835946403631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25324185-4	7.99885080625228	-2.02108666926704	0.724269271830544	-2.79051831670129	0.00526237225620053	0.0678120641793886	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09276006280339	0.961371261847668
Merged-chr14-76467111-6	17.5044214274827	0.179478940437468	0.395251369113804	0.454088092951781	0.649765423033676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04981891409831	4.27355692396087
Merged-chr4-134760992-5	12.4669551186608	0	1.29588854339317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97171917-5	13.4301943768651	-0.346621877470988	0.543153479566052	-0.638165620789024	0.523365873952442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20519907689423	3.21033636647571
Merged-chr9-104039930-3	4.21330933706654	0	1.33306670039565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121930202-3	4.84898144475777	0	1.30538436825475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65414470-4	5.69950564421541	0	1.34608421758468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27560968-2	4.33463530766646	0	1.31840928022402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45520608-4	12.0765987934183	0	1.29033240738606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-16021328-2	3.22044509038908	0	1.32299185787009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62421272-2	2.62916959629921	0	1.39652173857519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123366206-6	19.2305272855927	0	1.28355037088133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86583750-4	5.08033526993366	0	1.32071278289012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3138490-3	10.029414860434	0	1.32441319877925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25278368-4	7.69343807317416	0	1.29585991417287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85943039-4	15.0355117843131	0	1.29590875881094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108865295-7	21.9725920489759	0.293625954359951	0.456335172538429	0.643443617827255	0.519936288617979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0377890717383	3.74285897538764
Merged-chr2-60323600-3	5.16560561669566	0	1.30312104075542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29852692-3	4.87147162793911	0	1.36170090657309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51187285-3	14.4073758180386	-2.10575175920834	0.660100668576947	-3.19004639663212	0.00142249954452647	0.0249030691514991	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63541998227643	1.31470332505763
Merged-chr1-154105028-3	5.80260478437004	0	1.3125558668479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135128996-3	3.85827507672923	0	1.32585067108198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27693286-1	2.98771456030742	0	1.40287907476129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108995419-4	5.48311598555388	0	1.29682736130829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56930234-4	6.23937322290553	0	1.32027899293043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33158578-2	4.24447148609342	0	1.32384593770715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159646103-3	5.11032434687123	0	1.30137954238387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125069705-2	9.14440061209302	-1.40258722748693	0.64904251682657	-2.16100978152362	0.030694583833229	0.261235774311824	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36010898116794	2.63929222501099
Merged-chr12-69458169-4	5.47576091853063	2.47919026503389	1.19167342093951	2.08042759154544	0.0374863306897197	0.301301570141504	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr6-86790540-6	24.2518841556765	-0.924654874466482	0.374268602959371	-2.47056490219902	0.0134899837636431	0.138669330586291	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.91491926416758	5.01687965443487
Merged-chrX-20368118-4	6.29850444061815	0	1.31214433032375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115052816-3	7.52742072276143	0	1.32162930897801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93953726-4	5.36189652311757	0	1.33798275353799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134005774-6	16.7440578069927	0.876114024725006	0.443874009470168	1.97378987287583	0.0484056408484911	0.362552815146089	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43628583349575	3.93426342753415
Merged-chr4-125115778-4	8.60936447462869	0	1.29035516804024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98317583-2	2.76518198546536	0	1.42055664121532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114527262-2	5.18265219325992	-1.60343842537563	1.10434554491737	-1.45193543158234	0.146519559527773	0.815321795492232	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47915727373063	0.469435083901436
Merged-chr8-115310557-2	1.58639059103102	0	1.62855132197909	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96613315-2	1.92653772053646	0	1.67753633445247	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58210172-2	4.91531650670118	0	1.30390345772276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89378570-2	6.07831683942709	0	1.32184894248173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100398808-2	4.69962591789234	0.452579992488696	0.934291039484926	0.484410074978567	0.628094869664545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66149760952567	1.52696130946871
Merged-chr3-135672513-2	2.36225479319657	0	1.36262602525776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142764714-4	10.1226103028648	0	1.31237912286444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83650651-2	2.89512161102841	0	1.36774409114768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59264197-3	5.95315960647864	-0.637975467988568	1.22397939852343	-0.521230560545547	0.60220616739032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0.382164212378408
Merged-chr13-101678751-3	5.40200214221412	0.108785703780408	1.30186540878045	0.0835614058463353	0.933405153246565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr10-78095319-3	5.18754177467489	0	1.31155494285289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120023954-4	7.89110374824571	0	1.29531249400898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117904162-3	5.8219509403049	0	1.3180753527347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69391746-3	6.43777190748072	0	1.31241509381715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81110902-6	18.2604198844907	-0.402878983537861	0.462888139201618	-0.870359271319287	0.384104097118345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37541489134739	4.76057353276993
Merged-chr11-11540723-3	5.93629222282137	0.111503509916076	1.32100870318308	0.0844078541249572	0.932732162884887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr8-91322897-3	7.3467254732238	-2.40253022980764	0.979728397317499	-2.45224108680097	0.0141969507320041	0.143898548554915	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63360609969611	0.609949614787909
Merged-chr9-47712720-11	40.6289231574908	1.50764233273277	0.276686708838366	5.44891490835399	5.06780503591893e-08	7.01611838722793e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21111012669331	5.66589769045636
Merged-chr6-43408923-7	12.5026349216177	0	1.29507573693459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-114210572-2	7.69320829099316	1.24318336802579	0.66622630224328	1.86600763710441	0.0620402970105383	0.434381790255077	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68500358841839	4.24069722184058
Merged-chr16-50457193-3	5.82964434826195	0	1.30401758623383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5213608-3	4.7719945916959	0	1.30949442617156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101657933-3	6.43860336796379	0	1.30008245174423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18912454-3	7.47930533880718	-0.321946060984007	0.56812206928338	-0.566684658791913	0.570928445590909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70118079557394	3.4198149604239
Merged-chr5-29553184-2	3.29487433248264	0	1.36688325301785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86611009-1	2.1416950561265	0	1.48926651817913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153434024-4	5.69722431172331	0	1.29951030225123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58567365-5	13.8623883020091	0.83401060209531	0.61200457045016	1.36275224461453	0.172960606304049	0.918138406136833	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85155985608266	3.89652747650631
Merged-chr14-14600121-9	26.2788423737109	1.24571954937205	0.423521277629281	2.94133875951908	0.00326796928242245	0.0472976125646019	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67908500426815	4.32553612437523
Merged-chr15-67405630-5	10.4820042389093	-3.79164265816786	1.02214827095631	-3.70948400139681	0.000207682079489071	0.00563120048393894	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37086006176766	0.423054662900563
Merged-chr2-11203551-2	5.47102940483259	0	1.32748642041241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57052328-1	2.89476075370982	0	1.34359095265603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78541079-3	5.12195160904752	0	1.305989692725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30114306-3	3.43436949086522	0	1.4167099915639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50228825-3	6.22840731215085	0	1.29419802115792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5127431-4	6.50306049069315	0	1.29241790665419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120099133-5	12.3499089542192	0.413471626410234	0.527779921018785	0.783416742365077	0.433382427659177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88743892546131	3.35361843215478
Merged-chr16-30188209-3	8.75037214995494	0	1.31354640264975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70832401-3	6.22456974969384	0	1.31187061145783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21543407-6	23.1148401868768	0.700426302727748	0.314419562770104	2.22768041707342	0.0259018338044869	0.228541889250337	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64236806443705	5.29840065011915
Merged-chr9-13668983-4	7.94530967747639	0	1.3212096967478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142697764-3	6.10513560403892	0	1.34297053375864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68879816-3	6.82338122406811	0	1.31408399003535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65372812-4	9.03014113500399	0	1.32269099234173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86337284-2	6.02096053464105	1.68041006864166	0.843586785017769	1.99198244743279	0.0463729837862117	0.350971623638382	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.947437291748982	2.35275353596673
Merged-chr11-31812331-7	22.6746593558034	1.76201514007872	0.410610642085569	4.2912067040667	1.77704801246357e-05	0.000802508496354142	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61859050615836	4.66616829530064
Merged-chr1-153918686-3	4.66044015591539	0	1.3017591458752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14477703-6	19.6610817519683	-1.48158292673061	0.437766266167772	-3.38441547746578	0.000713299766971512	0.0145312922035609	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87380919254082	3.13787948945653
Merged-chr7-97148598-3	4.87073484103556	0	1.30338434091801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5920534-3	4.98008001526417	0	1.34809334621364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87102791-2	13.2133099898257	-0.862011034529348	0.615689986450705	-1.40007317562304	0.161491406788792	0.873649926982398	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63386244863513	2.01807112714131
Merged-chr10-24622728-4	5.41072637924586	0	1.30043996696064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46536808-2	3.41943002837593	0	1.40261590270943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35145310-3	5.44872246597563	-0.624856164341929	1.19656299079793	-0.522209168382552	0.601524703136854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	0.423054662900563
Merged-chr10-93444601-7	25.804707593393	-0.671477695772995	0.455606993221709	-1.47380901909519	0.140533019272979	0.791637561670955	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52367672654994	3.65705268498327
Merged-chr7-88319645-5	11.6780177903722	-1.2488352565049	0.559393295749577	-2.23248162964035	0.0255831480373371	0.226463883994559	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82212931947241	1.69973550690885
Merged-chr8-46680825-1	1.87756189309097	0	1.56640752710004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71903458-1	1.97406258404968	0	1.69169056142526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39544401-3	5.01365463042205	0	1.36411328296801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78305257-2	2.90775591099873	0	1.39171438274047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5737354-4	9.89364204382226	0	1.33793589864533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91037492-1	3.63184865259108	0	1.33245647697242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44427594-2	2.66197899418147	0	1.37992895396741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54365454-1	3.56985926746161	2.39100970423547	1.18839065347147	2.01197282833803	0.0442228013314757	0.339918234149305	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.486851288245
Merged-chr19-24164613-1	2.71691093799564	-1.95973279344646	1.20200961184309	-1.63038030156974	0.103021145281252	0.635635894584901	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01458359400261	0.892489746801999
Merged-chr12-55481103-2	3.4541271790166	0	1.40382236651581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120954152-4	7.41286661235888	0	1.29706764413798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100667010-1	2.30542940487307	0	1.45231271514179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125645031-1	2.53121075087317	0	1.347080499818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139225395-2	5.85825829809502	0.651978998061224	0.836278100974991	0.779619838545457	0.4356146752021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77161692292991	1.98077727572561
Merged-chr9-57524616-1	1.7507068930169	0	1.4748536538713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134273567-3	6.79539956761017	0.22054429121697	0.91223703848486	0.241762044197716	0.808964550888365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94439696724242	3.99252275576001
Merged-chr7-143045542-1	5.33784657359545	0.828117773060528	0.808511630933185	1.02424967233274	0.305717362482266	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45442689583501	1.60588664266147
Merged-chr3-9752470-1	2.46303769047536	0	1.4403535841291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120443520-3	6.5698133695645	0	1.30115907138707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116063267-2	5.36361962065829	0	1.34919587447204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121971862-1	4.17151737053108	0.381408482168363	0.711442532432259	0.536105819909888	0.591885418087028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01511971107962	2.16596752412581
Merged-chr17-10498165-1	1.69521234143996	0	1.40225120446504	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178492700-3	5.58324381872569	0	1.33539714158959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32551790-1	2.81997525237036	-0.649266659656731	0.931022017943264	-0.697369822779312	0.485571381927549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3114364429806	1.41695929335733
Merged-chr9-61119432-3	4.38829524943417	0	1.33246236126541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165299966-1	2.61075193538174	0	1.42241070707344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26652088-1	3.11451852993343	0	1.38290056404487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65374941-4	10.961718857039	-1.30298250721263	0.505260688502513	-2.57883214915136	0.00991349436268459	0.110171292963263	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19805496449534	1.94283950978213
Merged-chr18-39635818-4	8.90745256524497	0	1.28874280175149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33484774-4	6.32450693345231	0	1.29997037165125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69208763-5	11.018682862434	-3.12598081920418	1.01846049812095	-3.06931964958051	0.00214546900691825	0.0341945896892878	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83434607077356	0.420961122473315
Merged-chr8-68999507-8	24.999393238964	-0.764899494090673	0.353702861277043	-2.16254822290384	0.030575944286825	0.260463519145727	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37732154611017	4.6223920231799
Merged-chr4-135982177-4	10.6235604895844	0.272469525235943	0.52431958862536	0.519663066471143	0.603298433287312	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47594616710885	3.21282271434453
Merged-chr8-94804717-4	5.14136844959287	0	1.30856191884239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108780432-7	19.9764803979416	0.12877997122052	0.37694208788816	0.341643916554974	0.732618883049323	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92065668208323	4.88795379322235
Merged-chr1-119925557-5	15.4795556204449	-2.38301356766092	0.554475068272893	-4.29778308172386	1.72514865356381e-05	0.000785585811259795	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68429876163648	0.993458951033742
Merged-chr10-100160410-4	7.79173268169163	0	1.30299637478356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75760870-4	9.0170191928633	0	1.2866232928465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86167278-2	4.08634618390317	0	1.32045539016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61774904-2	4.05698873495458	0	1.37115838719537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66219952-4	8.44960510795255	0	1.30193144344399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59565777-4	5.02902659507652	0	1.3067805212672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9707408-11	66.0073107461751	-0.175547889478047	0.34558301797862	-0.507976029912753	0.611470153473191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32124135656717	3.65466215555644
Merged-chr15-27673291-4	7.2782557129607	0	1.28867614799768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88829775-4	8.03875861954187	0	1.30011277584719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10459536-15	45.3321900021657	0.120566417616245	0.278471131164217	0.432958407976396	0.665044986126903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.60178846479276	5.71377337231484
Merged-chr7-43512216-2	5.21916920630284	0	1.33350582810487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-54861421-1	1.90684578850477	0	1.46508685209057	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66895852-4	4.72184024308729	0	1.35237168708783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70684000-6	22.6216490706325	0.229686753696092	0.379244990193873	0.605642156482211	0.544752402226472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97673236501485	5.10270484105892
Merged-chrY-1291701-1	3.09498602841664	0	1.33779830574839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10451300-3	5.26931695249709	0	1.30745854976473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23449308-3	3.1184019635739	0	1.35299340846662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68548572-3	5.93077496579183	0	1.35704386463529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126603930-4	8.82620452547516	-3.27549702374427	1.02458612757271	-3.1968976893178	0.00138914188490967	0.0244596554538517	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19385122100658	0.609949614787909
Merged-chr4-3776413-6	18.1658388016144	-0.968771316896654	0.519535021992552	-1.86468914680894	0.0622249889344401	0.435488286056541	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91755791473551	2.48475512893435
Merged-chr8-124278656-5	45.1136274176055	-2.5353753519749	0.327571732314862	-7.73990885617048	9.9488107872073e-15	1.32676528510377e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	7.109639290514	4.55325136182033
Merged-chr19-21373544-4	6.62403761083537	0	1.30170566115812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10962572-7	20.6693732013793	-0.603873031580067	0.423521611135337	-1.4258375858584	0.153915228845513	0.844904615603063	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55671404559226	3.67340829073946
Merged-chr14-51931015-3	13.1717645205285	-1.59433873399149	0.464773723733025	-3.43035471365699	0.000602792682908975	0.0127064808572161	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69889917541018	3.26558851390608
Merged-chr12-4572058-4	5.58191331037364	0	1.32658754018536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116241596-2	4.83060364192056	0	1.34760729992222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96566908-2	5.38417300828113	0	1.31599587500482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94658393-2	4.85429891486982	0	1.39542971210312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133757561-4	18.7560385039186	-0.417076951665983	0.499275853824206	-0.835363754268066	0.403512931130104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80147517008238	2.39855328800337
Merged-chr7-25781577-4	8.24804835698821	0	1.30762995010726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-143348559-4	4.81236894689515	0.105365360959596	1.32671826857994	0.079418037314263	0.936700122252512	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr13-49108599-3	5.11809961628999	0	1.31540811773761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87205665-3	7.67932605213955	-0.108852042349162	0.717141715793936	-0.151785957993887	0.879355757700066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20994177627762	2.35966138218825
Merged-chr3-90111826-6	15.058204444443	1.0319107388862	0.456344950850972	2.26125157506824	0.0237436830263069	0.214037068704242	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24831121715292	4.3002170930604
Merged-chr1-152291072-3	5.56524520363658	0	1.31019003025239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133177061-6	17.3128401404432	0.68605493878453	0.395178748656277	1.73606232905316	0.0825528143159779	0.537171256067879	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.885791730978	4.71108289404269
Merged-chr17-43140105-3	6.41774778545694	3.05020138277477	1.07487947735786	2.83771478293772	0.00454377647336877	0.0604105020200928	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.57481894122996
Merged-chr6-125274964-2	4.07457331052653	-0.498715750906629	1.16158997580097	-0.429338890052613	0.66767661887657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.932426019499183	0.688405034366054
Merged-chr13-93995594-2	3.54987836427697	0	1.35692657765185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21852324-5	19.6617274236698	-0.347650830450165	0.435587624494234	-0.798119163403291	0.424801341721133	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99263176067227	4.51464646192394
Merged-chr16-93189657-2	2.47852150651366	0	1.48485284911476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97379523-2	2.50341337462395	0	1.40410775294818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-30959040-1	1.82608025750847	0	1.45614246047501	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-6230504-1	1.47845991979822	0	1.53950573665733	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80277067-1	2.77789759824591	0	1.34138654852582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52960916-4	10.6014037640869	0	1.30282670756897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114979196-1	5.37822694233141	2.27188850430401	0.95198749232134	2.38646885870759	0.0170110480119432	0.165097867724408	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.92713101668536
Merged-chr12-40430768-3	6.83170100505117	0	1.3350168570097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76856659-3	13.2422947975849	0.948542055334441	0.523170809524559	1.81306379879345	0.069821981862658	0.474380040215975	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66233917953317	4.28908536807461
Merged-chr2-12108571-2	5.17055879709746	0	1.30803987399138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123539317-4	4.54597361531351	0	1.30660666326632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95210881-2	3.9600349885112	0	1.31349465728103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12999284-3	6.26383939893127	0	1.28925020051776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118491712-7	20.6049200405156	-1.10643286355896	0.409687657935843	-2.70067414071876	0.00691991003350287	0.0834698194285099	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92550173787572	3.78702261309498
Merged-chr4-132483173-2	4.93425684599455	0	1.30633394859495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60605261-1	2.27153916159544	0	1.52821125022147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12892303-3	6.33472511527302	0	1.33513497938235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103693325-3	4.64489715912895	0	1.32891574942411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79375042-3	6.19679658498781	0	1.30174354603723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114168479-3	6.50881307104977	2.77934931810178	1.15127096648883	2.41415739561148	0.0157716476535547	0.155634866742553	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr1-164184707-3	4.80515029343049	0	1.31708828933117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71598829-11	33.0630873434823	0.316109460556929	0.320697323669424	0.985694102276871	0.324283244459132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56707554696697	4.89549940940837
Merged-chr3-38202054-4	11.9592568460527	0	1.30832498095265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-95830057-4	9.88976831286039	0	1.30587778792687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85667705-3	8.22579573767776	0	1.29697993128207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78449360-4	6.40956425672249	0	1.31083719133915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108923269-4	10.1421474216431	0	1.29503222529376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65551332-4	7.04605015324548	0	1.31098428733884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103169141-3	5.86401239241789	0	1.29767289069193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29497009-4	5.02331835158	0	1.34170223277282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22845620-2	4.84794439918174	0	1.33347819742626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55431127-5	18.4228934262028	1.31412235604471	0.382740458208866	3.43345556462594	0.000595939875683349	0.0126026819146939	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11052534131921	5.78097101102438
Merged-chr5-76178907-4	6.23947564753566	0	1.31920190949835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39460995-3	6.80855052406048	-0.841362651424493	1.2701827924768	-0.662394937490748	0.507718147319491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0
Merged-chr19-37554122-4	6.73972096822288	0.923221844337897	0.934586003451448	0.987840435153552	0.323230800996272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	1.20539659680455
Merged-chr7-118170366-5	16.1710383459988	3.02774088578189	0.630749186237601	4.80022955533604	1.58483863087883e-06	0.000116888109676533	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07230490324754	3.86030459935135
Merged-chr4-142063139-4	8.7024586035542	0	1.32697330744478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106387947-3	4.28235606513064	0	1.33526991911089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34313584-7	14.106064158858	0.390299124584076	0.618460660683281	0.631081569768512	0.527987191125141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69577906103456	2.94421872275554
Merged-chr18-5941428-4	6.07215378006305	-1.09426004280872	1.15925915346054	-0.943930474512287	0.345205177901895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917336671752516	0.382164212378408
Merged-chr5-66238349-3	9.38733601045307	-1.39566851517584	0.609349555634204	-2.29042345607891	0.0219967810862569	0.201910613409544	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11540036765473	2.27876782129315
Merged-chr15-66813085-3	5.42123408914	0	1.30972931932778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83619217-3	4.60491664947773	0	1.31332968535369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84443570-4	6.87717976108475	0	1.29168662502361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168583252-4	7.03391053609098	0.112470969630694	1.29163357334128	0.0870765300252664	0.930610680838429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr1-138559926-3	6.03623351474196	0	1.30956927503581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91379171-4	6.72926111139386	0	1.29784749076362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145509097-1	2.57281351003071	-0.366965968141384	1.33312422093582	-0.275267647514335	0.783110618225211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.899323202389902	0.469435083901436
Merged-chr11-21048167-4	8.98023986165252	0	1.32320386889051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125116309-1	6.12398595431908	0	1.28945236233304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-37091671-1	1.54842390741763	0	1.54724767754584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32010993-1	3.32796342422897	0	1.34607438134601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51730970-4	6.63967724184481	0	1.33682336299654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128718584-4	11.2851735201915	-1.02803607462214	0.761687586350924	-1.34968206525096	0.177117987628204	0.933186795953415	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62691181231092	1.65215194967867
Merged-chr6-115909245-1	2.56261794848046	0	1.3823436060067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12356126-1	1.47285326350438	0	1.56311131909055	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65664914-1	2.37837804154605	0	1.35201330874963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47012858-3	4.07252615348116	0	1.32799539834743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52807768-1	1.69186891277364	0	2.43325058631615	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72350945-2	5.98383307612646	1.30409214757975	1.30327284783722	1.00062864790277	0.317006374712298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chrUn_JH584304-12347-1	1.59201268275367	0	2.15287049006964	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89293528-1	1.63640210530321	0	1.47638492045234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125380521-1	1.55757038773098	3.31000113210138	1.5609124431739	2.12055528583715	0.033959244366236	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.54028618764495
Merged-chr17-73055337-1	4.90326360860215	1.09482005809623	0.85370886769987	1.28242788556944	0.199692587286285	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69013863425831	2.62367387427232
Merged-chr1-183439241-2	3.93247761663705	0	1.34820320892116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37783935-1	3.30806327759848	0	1.46237950842846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4171901-1	3.4977808909258	0	1.35260409876066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9466426-1	3.44593247143881	0	1.35323904071079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124912113-7	17.5082368903126	-0.138486377626076	0.487859209062673	-0.283865457602308	0.776513488863384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72182829254324	3.62344383809729
Merged-chr1-138297942-4	9.97123452511267	0	1.30114811051131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6404687-1	2.10662453602483	0	1.4094800895977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85401977-2	5.44316956357492	1.95632775699285	1.23538774574489	1.58357387284367	0.113290723456872	0.680892891834099	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.733321818366247
Merged-chr3-9984097-4	7.56775837182285	-2.50688112175452	1.12491916455042	-2.22849890085782	0.0258472645522065	0.228383694713591	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59493902213167	0
Merged-chr4-138211099-1	6.5838280527522	1.92452971168698	0.717939183214149	2.68063055574016	0.00734835936763793	0.0871638938532707	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69110080355944	4.44396969568216
Merged-chr10-111770131-1	3.16436119885205	0	1.3692982267119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61122801-1	2.06944238270457	0	1.45791804091272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25178396-1	3.78055501058831	0	1.31806765444837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112746907-1	2.68685169459777	0	1.35449825565569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95540238-1	2.31181101648759	0	1.41749806781741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105162984-1	4.10781111959332	2.8652960816787	1.27265191804148	2.25143736559811	0.0243578497584059	0.218391979966303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	1.97643561496984
Merged-chr9-22531347-1	1.85186664023681	0	1.39006800616914	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32466727-1	3.12257563764832	0	1.36490515479371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33390354-3	7.11896199044298	0.573576117836509	1.07656364081991	0.532784218311213	0.594182959626951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789939949474495	0.733321818366247
Merged-chr11-120539153-4	5.74054492559862	0	1.31467605841365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97078730-3	15.0469618946646	-0.581299198156169	0.539511597567689	-1.07745449917458	0.281277267825318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31238407608157	4.98588075226813
Merged-chr5-120167891-2	6.86221232972172	0	1.29575244431443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136714356-7	21.5958424879699	1.20217555559925	0.302135744026195	3.97892529887171	6.92274860337626e-05	0.00237591349913984	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27343648868648	5.51114184432221
Merged-chr11-101642099-4	8.8588123055974	0	1.30256643692823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129548202-2	5.03480314997057	3.86383613206994	1.08401067144145	3.56438938643662	0.000364704208570112	0.00863789822878672	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.52242786274935
Merged-chr13-89376292-2	6.12130221053681	1.25944181089495	1.08491285458599	1.16086910167135	0.245695135987238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.04220233489076
Merged-chrX-93756604-5	14.3356769342805	1.66039860393064	0.3383386172749	4.90750543731626	9.22420989669715e-07	7.52515880036919e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78707559304912	5.3378289748026
Merged-chr14-17409669-3	6.37429320322226	0	1.32480949176057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32591544-3	5.94820008359898	0	1.29863278436489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88740049-4	10.0439024798902	0.723430069411444	0.710039859884673	1.01885839131474	0.3082701997701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6250242309444	2.15258675016244
Merged-chr1-121508526-6	20.0860418852888	1.36799146527982	0.46721992835433	2.92793903311925	0.00341216945721225	0.0488544314967116	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84122272397672	4.20879108941079
Merged-chr11-20561437-1	2.89154921771281	0	1.33366022616285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104243985-2	3.51378913611753	0	1.31666263142857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79107018-2	2.98526834621224	0	1.43567455876511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124616958-4	8.19364243444284	0	1.30508144956267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87839650-4	6.63091163057168	0	1.30123090767874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92944052-4	5.84028940581161	0	1.33184264676668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73765271-1	2.77333356308584	0	1.3362190707711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128638684-3	8.54258460535136	0.0185954105058097	0.828356806828672	0.0224485515812943	0.982090151534146	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72278640601449	1.51070380065102
Merged-chr5-24384675-3	6.85682104925614	0	1.30688132465583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13575121-4	6.7075569360935	2.82566325047387	1.13812681141312	2.48273146905788	0.0130379331093977	0.135298837059981	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr13-34088466-3	5.150174107886	0	1.31831564176153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94105680-3	10.7590848859696	-0.0728383417933741	0.630203509737592	-0.115579079881201	0.907986143609239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23070871836211	2.3356278069727
Merged-chr12-38864735-3	6.78247371647093	0	1.31416173399112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81969539-1	2.81723158165487	-1.74233058198278	0.986487832765579	-1.76619571383686	0.0773630198959915	0.512714391290412	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64709899041887	1.46402698790757
Merged-chr6-148621786-3	6.05636275769943	0	1.30154887658817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22747175-4	7.31716078315161	0	1.30170059900115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19839116-3	6.9844503052649	2.48328374896561	0.78533516875669	3.16206869087124	0.00156652606992117	0.0268607222684516	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.804694039803978	2.29030395119577
Merged-chr14-76279723-3	4.68335842756993	0	1.32204822004605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-162998686-2	5.0649149270465	0	1.30162421062779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31506940-2	4.30412273865375	0	1.33360732564262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34714054-8	31.3932323370361	0.00786851533458812	0.362493199247874	0.0217066564308359	0.982681953960939	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93935545499632	4.89066005091149
Merged-chr6-108477137-9	49.4506294800804	0.767327510575043	0.314923070703999	2.43655540656234	0.0148278976550473	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89943645658999	5.67172186001399
Merged-chr13-60712771-2	12.0892922981928	-0.113453899803655	0.521653532797383	-0.217488989665717	0.827827286629187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91501962226666	3.72054584236027
Merged-chr9-21328254-4	6.80758080352935	0	1.32304982172995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21012001-4	6.90637793385059	0	1.33177446620756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118163860-3	6.77048236440306	0	1.32264231803532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49121472-3	5.09850569238767	0	1.30729593978635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-28911785-9	30.8649287897938	0.245530165693299	0.294544665683429	0.833592301268121	0.404510765410657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37301743380918	4.62930362999956
Merged-chr11-22008240-4	5.21967345480232	0	1.33968481069954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57570599-3	4.99393187888169	0	1.31781157925339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152406799-9	23.614405884484	2.42710563393258	0.450036310356471	5.39313290523176	6.92396997097504e-08	9.04907483446669e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79359072995269	4.61602177885601
Merged-chr19-24990645-6	24.5885774426681	1.28186329429696	0.415147378720249	3.08773067108959	0.00201691172865554	0.0326230479754269	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71278666018269	4.92524636778637
Merged-chr11-111165123-3	5.80886811339288	0	1.33256850480987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118242869-2	4.45549792202688	0	1.34160858398519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-111886257-1	2.30568091934381	0	1.35873233245011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22092778-2	3.09280990194849	0	1.38666654988789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84020725-4	12.8350419394526	0	1.28816376711792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31759543-4	5.92726487643332	0	1.29684700679442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114071635-2	2.95964951548419	0	1.38256220760058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122580666-1	5.34229587281363	0.652677209100123	0.921477618846588	0.708294152512437	0.478762607637911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81654169293635	2.47092068604539
Merged-chr18-42792222-2	6.20616172551586	0	1.3179628512491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27693828-1	3.47361658157492	0	1.3715995627073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99124083-2	2.67076603387933	0	1.35117734981114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134095830-1	2.19397356672728	0	1.4561833255483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52555249-2	2.82864893711495	0	1.42824976179326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73849946-2	7.19720933384787	-0.586361237018128	0.975039408276584	-0.601371833836483	0.547592354375569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23174997372662	0.73596151290311
Merged-chr17-27046880-5	10.1209530763717	-0.581955043605077	0.62134679919281	-0.936602625717383	0.34896300085802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89693263905377	2.37705875126183
Merged-chr3-137969384-3	4.81769457002881	0	1.32354946405572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176853367-9	31.066792896344	0.851213392756393	0.337785829750132	2.51997957814292	0.0117361643170188	0.125230469212918	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82924571033098	4.68812593862815
Merged-chr11-86908491-4	9.09847080944571	0	1.33471116521951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157046867-5	22.9855240959809	-0.657789115641718	0.336128456627054	-1.9569575341595	0.0503524612998623	0.3727154436	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.31816805750496	4.56527867477605
Merged-chr18-61632536-4	8.1057760831695	0	1.2914219249369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152111237-2	3.64741914027837	0	1.34960936123974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47072767-4	6.34226555514023	0	1.29111292105179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129365394-4	6.55598427910587	0	1.32198448919258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110471735-5	11.7291219899423	-2.11418858480089	0.683625865249323	-3.09261058171025	0.00198404298835795	0.032202998787193	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68114278807896	1.207189364431
Merged-chr2-84538171-3	6.42630273667613	0	1.31427800467523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84442767-1	3.84540171124426	0	1.32310513855059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129364168-3	10.2026906819665	0.553577481002683	0.679612905343475	0.814548218037304	0.415330961144203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1882773616884	3.94696388258843
Merged-chr17-10743702-1	5.27832421477957	1.02323940996506	0.863109112383973	1.1855272934598	0.235809029895284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54444915085109	2.3197686931346
Merged-chr12-34616140-1	3.57604664298456	-0.790670465043488	1.30264789539776	-0.606971744119741	0.543869664025984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31858720811733	0.581381506691384
Merged-chr3-138493883-4	13.464740949013	-0.116328941449252	0.570265170681215	-0.203990963204522	0.838360560754144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6372774839455	3.581379703232
Merged-chr2-128748712-1	3.14775241168618	0	1.40787235588146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50390322-5	13.2065059853054	0.760353333965688	0.546619928137428	1.39100917260105	0.164222645273481	0.883063431884467	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68848632006056	3.77460847778507
Merged-chr7-90481037-3	9.35325319746238	0.164583774395049	0.595175203519411	0.276529958610215	0.782141052724066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21943672604863	4.4989608393747
Merged-chr5-24261248-6	18.2959658788509	-0.790571269867823	0.394149448002307	-2.00576525953474	0.0448812988182202	0.343106332805163	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37752961331022	3.56645325292408
Merged-chr6-97504957-6	20.7481125359618	1.79544587584527	0.350135173552094	5.12786492608157	2.93046566250811e-07	3.01565683751582e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34674839015321	5.05792330776178
Merged-chr17-12372227-4	6.71660614473711	0	1.30183706669648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66016328-4	6.08355205736644	0	1.30723219290978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4902553-2	3.74832858089269	0	1.3280037938752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108378253-4	12.3256671687605	-0.335913997050386	0.47794258019298	-0.702833375747257	0.482159594953242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94521087414652	3.56134390254646
Merged-chr1-164652442-2	3.90397954554133	0	1.39152957884928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155470620-4	8.27103298518924	0	1.29348459429681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52605482-4	4.83539891616806	0	1.30438082104609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57591750-4	8.50547489601741	0	1.30161428860953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87522524-2	5.15736152762659	-0.540649467652285	0.824190399485689	-0.655976419999142	0.511839296154253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1009897497765	1.76891977860032
Merged-chr17-74414835-1	3.21956042273204	0	1.36286128983601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5575949-4	7.49905348927331	0	1.32500367474993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115343294-4	6.79423355436817	0	1.32732865724273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-121009987-2	4.38345382564458	0	1.31754299250944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141575531-3	13.5253228491111	-1.29213346553601	0.449833772276794	-2.87246877662384	0.00407278323077748	0.0556894942453202	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35594177294817	2.66067886431113
Merged-chr4-58470457-3	6.66488012129502	0	1.31228876857871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49968893-7	15.9675640850195	-0.627302368013728	0.37295773422908	-1.68196637431421	0.0925753605060958	0.584711918386945	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58024630276307	3.95403866363888
Merged-chr8-128551585-6	16.4239588107218	-1.00460764789803	0.374765210707797	-2.68063208428736	0.00734832580580389	0.0871638938532707	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93103298560679	3.97715045765267
Merged-chr3-52029871-4	5.26105666827712	0	1.29540032623819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80026342-5	11.6184188283973	-0.719021266124542	0.549253542243467	-1.30908808195874	0.190504515853444	0.983465641725325	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09721815204798	3.57889898705706
Merged-chr12-17253238-7	17.263525216295	1.22586649097377	0.363600717550403	3.37146334372632	0.000747699881860112	0.0151126496999786	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50037453703783	4.74794507718768
Merged-chr7-132568990-3	4.47516705993057	0	1.31717140977985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31956517-2	3.23412670952917	0	1.35265010415892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66520356-2	4.20981213893697	0	1.31758569851213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103832117-2	4.99330964040886	1.45074661008669	0.939457196814061	1.54423917875827	0.122530400777354	0.720071147821353	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.796855916231748	1.60139579763857
Merged-chr5-36742586-2	3.88111128828251	0	1.34980817242464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65485941-2	8.11269857425742	-0.256428774776821	0.830482603305804	-0.308770796349117	0.757495885484915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00272770253186	1.7821740460218
Merged-chr4-137814430-1	6.39164605300348	-2.31501062269504	0.831191303072612	-2.78517185410541	0.00534993599986264	0.0686014116707027	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38743629497214	1.96617270997603
Merged-chr5-124467963-3	5.54743139591403	0	1.30507772752275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97454500-3	6.75218399730501	0	1.30369911950426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82917103-3	7.08088373372509	-0.682719390293036	0.751808329907802	-0.908102987335563	0.363823812310363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52713699445696	1.51144536133504
Merged-chr10-130247221-2	4.52773902959028	0	1.31671572837792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53594941-6	17.849571127626	-0.763584458329546	0.526371599721438	-1.4506566439634	0.146875493899033	0.816553377360337	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40014992527448	1.80720849528393
Merged-chr15-9118770-3	5.51624245818233	0	1.32536797484906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144320209-4	5.17859213314797	0	1.33210315764201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78059914-3	5.08197351276149	0	1.30969368420022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121373167-6	11.0051510427901	-2.40368475057178	0.711830861905886	-3.37676389042202	0.000733439792263128	0.0148611958651865	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75683634130001	1.29358708977899
Merged-chr5-122145587-5	14.0771632554503	0.732673748537012	0.541125107423892	1.35398217248691	0.175742065414679	0.928603623076543	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2704916494066	2.48718831954708
Merged-chr10-84829230-1	2.63841996064236	0	1.36610479635713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75422668-2	5.00636386065381	-4.14123618939061	1.12305071798537	-3.68748812771301	0.000226478656721302	0.00599654550328614	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00097638853546	0
Merged-chr11-21021609-2	3.30946478128795	0	1.4093953535877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20750123-1	1.84414885436782	0	1.4477993246759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9071761-1	2.0636828237489	0	1.50183203473837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115533859-3	7.92255741690987	0	1.28862862299826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-37164759-3	4.04101690677269	0	1.38491339184663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50803639-1	3.63736721473426	0	1.31655271531581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135956869-1	2.62926949238147	2.22283959199081	1.45766696646206	1.5249296602954	0.127276642959832	0.739487819938933	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr3-146657144-2	3.27039819167165	0	1.38879378760252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142065561-3	3.87347772130433	0	1.34633367881321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39587024-1	3.68871811663929	2.92249383077048	1.24004494456222	2.35676444114873	0.0184349367277883	0.175886899607834	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736070423127282	2.09309400240657
Merged-chr4-105560706-1	2.1923812382146	0	1.41983234788704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144562212-1	2.58366661851226	0	1.38833794771247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73730297-3	6.99533241791857	-1.89273596586221	0.752269980651701	-2.51603282670208	0.0118684127993866	0.126301006287142	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9586560502656	1.9249081550311
Merged-chr15-98477907-1	3.3186643795677	0	1.34963223734027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15652061-4	6.86593581209491	0	1.30865755510307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34611591-1	2.59053970783145	0	1.41324155722362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78764679-1	4.2184288589846	-1.11850804664893	0.893784029047109	-1.25142988719702	0.210777678856223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4032128564863	1.52572753666912
Merged-chr2-26661602-1	2.39499493822707	0	1.36119683362645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74596162-3	4.77019308080562	0	1.32245776905774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48838500-1	2.06643158349714	0	1.36196020988878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58270282-1	2.08889172015717	0	1.47953663627306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31337312-1	1.5926482778039	0	1.42633169560914	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-67847391-1	4.00308228843793	0	1.32031091513661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55469291-1	2.26276091757156	0	1.36098803725827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81232924-2	2.16928863043581	0	1.4388295832787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83842786-4	10.0344106176348	-0.268384039871365	0.797778947147092	-0.336414041547628	0.736558662296094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04173003696591	1.47954504644696
Merged-chr18-52244175-1	1.50773453366568	2.50801183130237	1.46412377259938	1.71297801336132	0.0867165845778566	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-156201634-4	11.7634641505525	1.67973979656004	0.5129327218333	3.27477605748449	0.00105745764359899	0.0198507978105773	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52892169530541	3.88988654613504
Merged-chr4-59340879-8	15.1641568219881	-0.296727742203276	0.504511323002847	-0.588148825753117	0.556432402875727	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30528458721042	3.20722765583003
Merged-chr3-69062954-3	5.01949311319775	0	1.32294909995286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33003777-4	9.55195045943893	-0.291752236169482	0.633101562688203	-0.460830067976261	0.644920527628273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73597543354309	1.47126464988938
Merged-chr10-100948702-3	4.51693990848207	0	1.30877526455963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75905646-4	6.6667727892729	0	1.2954228506789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77878080-13	52.0885980198309	0.49120624087639	0.231070415536937	2.12578594163592	0.0335210871182209	0.278650166496281	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26204602376094	5.77268071031424
Merged-chr6-125426045-2	5.28611786267453	0	1.30278794146294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57851342-2	3.74015967428044	0	1.35618056431321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26890760-2	3.9466042860095	2.4615762152928	1.20763738505891	2.03834051988438	0.041515890254851	0.324431638913357	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr3-55549651-3	6.94324410851596	0	1.30615850818264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90611632-3	6.17942457271682	-4.32548314782789	1.0632117664468	-4.06831760551656	4.73538071099394e-05	0.00173939397380894	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59143130398439	0.382164212378408
Merged-chr7-118766189-5	13.8909534235913	2.65289109289748	0.495798115470456	5.3507486416728	8.75911139617466e-08	1.10710424234899e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26228322264891	4.82110986488972
Merged-chr17-71221626-8	23.8231307401282	-1.27630097218685	0.404172225549215	-3.15781464313271	0.0015895659347925	0.0271179761799185	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19564034559492	3.81274967359964
Merged-chr10-68126374-6	22.3327836934475	-2.03954590684233	0.584422024684772	-3.48985120460241	0.000483289556387825	0.0107163350362127	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26928414454956	1.62128842389662
Merged-chr9-121372177-2	3.90152433130504	0	1.32361212209428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5735089-5	11.4476984182888	0.00670676285125185	0.575168312152408	0.0116605221629016	0.990696460226069	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92003930837739	3.08320653278703
Merged-chr5-32104302-4	6.56136975346666	0	1.30203522981415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126655922-4	6.63947816457979	0	1.31783369350578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105599534-2	5.57523026921626	0	1.31112982014499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120555035-4	6.55952130004451	0	1.29898591168315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36550371-6	12.6097115361537	0.631469431654388	0.45148943991516	1.39863610491764	0.161922133631487	0.875117701383812	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01067966780041	4.0833050856895
Merged-chr11-90242586-1	2.59428091453522	0	1.35509281336601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39666807-4	6.49120297578318	-1.95297652402157	0.873464989927829	-2.23589559575013	0.0253586108847803	0.22490279409295	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75193493514969	1.20275690226768
Merged-chr1-152533966-4	7.12435821709335	0	1.32140953568152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82995559-4	13.7684695844346	-0.95215745452607	0.417582160885324	-2.28016793750811	0.0225977301496169	0.206296629555304	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3650517023654	4.42147632606462
Merged-chr10-111102476-3	6.7233536825563	0	1.31132001252156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80035300-3	5.15084611252609	0	1.31060304087867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35061127-3	8.52801152404429	0	1.31601204058802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62187115-4	5.91402432050729	0	1.29340941984426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38013931-4	5.55381644204585	0	1.29790297560617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127264131-2	4.88886891942343	0	1.32645251798716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6374007-2	4.63287743433266	0	1.31623519027054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58986033-2	3.68295074653553	0	1.37769072990441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73170087-4	5.02698847206462	0	1.31813986987157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10495198-4	4.75857490653466	0	1.32822675346487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66919570-4	8.31207909668282	0	1.28962858879068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96300508-4	9.96438477919276	0	1.29685629427954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108215012-8	27.0218209523932	-0.77034045218144	0.283508210811081	-2.71717157671587	0.00658424650698218	0.0804224681070122	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.32618775211004	4.58363003070819
Merged-chr17-35869751-3	13.1450791013968	0.705798499522289	0.522393630118837	1.35108557767393	0.176668020860948	0.931625074471561	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64320436116887	3.26561159551609
Merged-chr14-93650258-6	16.4381044991872	-1.12502976259612	0.667696884985095	-1.68494085848736	0.0919999825153984	0.582063012593905	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64789177112127	1.31470332505763
Merged-chr3-108164910-3	4.82491137918662	0	1.31942157567619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-87926539-7	18.3421770461946	0	1.2888532092612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8663105-1	3.12511355496056	0	1.33274666669827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5579609-3	9.76166398155159	1.39999887041144	0.574048628764109	2.43881580803625	0.0147354768737357	0.147684734937291	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02189770594313	3.22416778864126
Merged-chr11-50321489-3	5.6507984246189	0	1.31351846554463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93799732-3	6.94176530376885	0	1.33093051020904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84085922-4	6.34730757261491	0	1.31585780960219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50047865-1	3.66059242147716	0	1.3931217988208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24569890-3	4.46187886480333	0	1.32582164167057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128963124-1	3.23993392947064	-3.15419793863053	1.04446189575078	-3.01992629071761	0.00252836209013507	0.0388566202121275	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74725241767273	0.73596151290311
Merged-chr2-5691962-8	18.7759801442198	1.30908311056992	0.396929076010304	3.29802775782526	0.000973665085744546	0.0186748220408169	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09029422905196	4.69480361703743
Merged-chr19-17361399-8	22.2704970304011	-0.353062347891756	0.332733778385854	-1.0610955990237	0.28864645772364	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36509018579464	4.98883392333246
Merged-chr3-107133099-2	8.23124464385654	-1.0705068380537	0.612126109540408	-1.74883381278647	0.0803197501726815	0.526436749727587	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92720982576638	2.30810693946836
Merged-chr1-165701030-3	5.5677253318282	0	1.32402877611012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67973664-3	5.72067532094441	0	1.30198934864761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51498148-2	4.38366514148763	0	1.31772368542087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7470241-2	3.77302481907697	0	1.34002688523887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45623665-2	5.00909137667792	0	1.31659765773045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102751164-2	4.0132288842069	0	1.344548886672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43072987-4	9.12425353929462	-3.15928083615724	0.721461994392704	-4.37899828502621	1.19226070139639e-05	0.000582283017888253	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43209483576599	1.47971361857133
Merged-chr3-96716028-3	4.0031462053556	0	1.31675498692389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128805309-6	15.6523360913091	-2.24252220949848	0.474802588403039	-4.72306230899252	2.3231963280338e-06	0.000156830152119521	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86918676808484	2.34001935796286
Merged-chr16-35754102-8	34.2232604392643	-1.35710871499258	0.325219446745238	-4.17290149335897	3.00744991077504e-05	0.00121687196204028	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.05123621387334	4.24319363576369
Merged-chr10-122715565-5	13.788130102407	-1.04794241557675	0.539703928388914	-1.94169869896073	0.0521735863126115	0.382255316872285	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30206220711764	2.62524321197361
Merged-chr13-40952999-4	6.11109421818702	0	1.31465344950945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155473030-6	16.2517688300897	0.570314591818692	0.52746035744173	1.08124636055079	0.279587540621914	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90619252448539	3.48459239090607
Merged-chr12-113218044-8	24.115999585472	0.572813716155666	0.336236471848495	1.70360375543606	0.0884551394107055	0.564968188831196	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88639594754874	5.43494035496724
Merged-chr6-31114581-1	13.2240632738109	0	1.28391489322788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141959114-2	2.25963429681285	0	1.52673834070277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118599956-4	11.3472420843983	0	1.28989152882736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152468931-1	3.78938954438446	-2.06112556740608	1.1796702723334	-1.74720480438076	0.0806018186564452	0.527861940461422	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74000136576932	0.420961122473315
Merged-chr6-16891635-2	3.84361125752374	0	1.34129293763976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69400472-2	7.28868002065039	-1.45341628167646	0.580370727429375	-2.50428943601972	0.0122697614571113	0.129612000028515	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91944686711952	2.07952021438838
Merged-chr6-136692710-4	15.7233051485248	-1.37861366873378	0.489590007571245	-2.81585336182166	0.00486478655265873	0.0637637891258417	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.54113441201264	4.11509062137065
Merged-chr3-51719185-3	4.35617477358876	0	1.34890118300116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32249289-1	3.47859104160466	0	1.33113927162711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53265706-2	6.1744340094617	0	1.31628393659219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-79816661-1	3.7542109437889	0	1.35294323304958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17872332-4	21.302062482787	-0.650766169006343	0.401045161836477	-1.62267552618348	0.104658785815084	0.642945426846567	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00750965485142	4.46871419416706
Merged-chr5-99523074-2	3.54379907930834	0	1.41543128163742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103846698-2	4.59297031651722	-1.19311900873876	0.704417164255998	-1.69376765541897	0.0903094425848513	0.574229914872987	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20713809156273	1.98088044523647
Merged-chr7-110184838-4	5.10007979865761	0	1.30985234269942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59774213-3	6.11015538405503	0	1.34562658021148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83417493-11	35.5045866207142	-1.06517249622679	0.331791172748733	-3.21037020787003	0.0013256412000441	0.0235843587961018	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.40263928012665	4.27684135397523
Merged-chr6-83131841-4	6.51071193152069	0	1.29504092769614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108835946-4	6.32804038786516	0	1.31707475084855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58576177-3	9.44986930453146	2.58183543990023	0.631072587868389	4.09118616389447	4.29172438234611e-05	0.00161633666387465	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16043909889595	3.71369318304029
Merged-chr12-10068305-3	8.75175450167493	-0.904330700572159	0.700643820031027	-1.29071387589219	0.196802911295107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52711574464698	1.83283749367074
Merged-chr8-117308440-3	8.58464753311976	0	1.29368085169412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80410516-3	4.66798043622509	1.30243077813335	1.32812769658564	0.980651771272932	0.326764494733781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr9-83570085-4	15.4012326766461	1.29895949987946	0.540752004997751	2.40213533722332	0.0162996768229512	0.159711903084806	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45744119633444	2.95123578646043
Merged-chr1-177986911-4	6.12567708620439	0	1.29633271688173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140382853-2	4.51337676742331	0	1.32113283465141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130204764-3	4.5023179282058	0	1.33492813961174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60369758-4	12.1491913474464	0	1.3441759654632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31135819-3	8.94941043617385	0.248631504433192	0.802080510343759	0.30998322640533	0.756573711914639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34888032438169	1.62635771927786
Merged-chr4-129504778-3	7.14832336516129	-2.4941417309551	1.10230616801319	-2.26265787430961	0.0236567875234876	0.213489357479605	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98493383917929	0.306240821987646
Merged-chr5-79794969-1	2.23764725386936	0	1.39252973075698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70181620-3	5.29787425975687	0	1.30008561599472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43757335-3	4.71628511663426	0	1.3479400577771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33119117-3	4.43172483305144	0	1.32118026495737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143499882-1	2.80724875760626	0	1.40933216302193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59865352-3	6.6070682631782	0	1.31477222769381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9130030-3	5.52537002633573	0	1.31211693476083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33110943-5	11.4088814398549	-0.895611507809337	0.682224536964079	-1.31278114357311	0.189256705752024	0.979406649082968	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94148825231249	1.65288709737369
Merged-chr4-119968302-2	5.14286899960143	0	1.3069869315484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63813042-4	9.39931212983503	2.55620001942688	1.08502813053991	2.35588363792459	0.0184787051039307	0.176253023459562	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.14490468848716
Merged-chr13-64922652-3	4.88675421293154	-1.29868672067309	0.724396399120116	-1.79278461661396	0.0730073702097393	0.491119993177437	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06832744301623	2.49065419848114
Merged-chr10-118126918-3	9.83144306162163	1.02740398870688	0.538823779043051	1.90675324413401	0.0565525485713511	0.40596318125272	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90194236989813	4.72092326194027
Merged-chr9-13545963-10	43.9310893860515	0.357146152003028	0.285802393982123	1.24962617361899	0.211436137334306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68341074119944	4.85480652321681
Merged-chr9-94617312-4	12.3076198133417	0	1.29271004347969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95801396-4	7.51125584779102	0	1.30292689365984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-139571308-4	7.74028209901263	0	1.30474906997998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86879374-1	3.00955599575759	0	1.32944956534709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37335292-4	7.70993940636441	0	1.32975731578735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88623731-1	5.73389859110702	2.71232538040584	0.860292723222389	3.15279358663678	0.00161716113009622	0.027483748038301	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.880460860551173	2.84601879663859
Merged-chr1-34468328-5	11.8116675168009	0	1.29202153400925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87139637-2	9.88635568904481	-1.89746889914623	0.532302607455117	-3.56464325474157	0.000364351412104492	0.00863267127461208	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29793183851475	2.16596752412581
Merged-chr17-79095836-4	13.2437558397735	1.60007078081386	0.400699426186783	3.99319458987196	6.51890276102515e-05	0.00226226351472092	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7396681781808	5.28628673534837
Merged-chr2-28441027-4	5.35985610269473	0	1.33756275723849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63117194-2	3.83065417043969	0	1.31167703391641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141558369-4	8.16573207307189	0	1.29032448520056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91846649-4	6.12560282812482	0	1.31040369677531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-37849645-3	5.63700911555885	0	1.35596207650989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76856764-3	5.68587339497618	0	1.31262593805553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20172358-3	5.85098199966276	0	1.30224076347913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20855134-2	5.92316648831027	0	1.33732144220334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35460446-2	5.61270242679143	0	1.32049826844623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90963495-3	5.3660090017822	0	1.34951758746836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23688266-4	6.47177571189695	0	1.29605366251799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9901823-4	6.99806818424856	0	1.29559014623784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6733238-4	8.54340984421633	0	1.30302273907896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50469297-2	6.93821529409705	0.212819785606255	0.814302940855738	0.261352102428374	0.793820990378307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6007595589972	1.95160684218358
Merged-chr6-145517177-4	9.88798855993381	-0.590675227701	0.676379749384988	-0.873289344097133	0.382505387186612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44799516167929	2.88341289616239
Merged-chr10-117921169-3	8.71030203622622	-3.27538678190384	0.945944249783438	-3.46255794953423	0.00053506667845037	0.0115853105268449	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86031332036325	0.581381506691384
Merged-chr11-120894131-2	7.61538249002264	2.54156396439602	0.621266854372143	4.09093764862854	4.29632637497264e-05	0.00161633666387465	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44128411238817	3.70725431807534
Merged-chr18-39741990-1	2.00603473488215	0	1.81395762868517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92751168-1	2.41618027675618	0	1.33881996618242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8942607-1	2.59588078570632	0	1.35284423612247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35183403-1	1.37462693195728	0	1.48985081316493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88768415-1	2.96906756121652	0	1.39319163449193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46524010-1	5.06862043619536	0	1.31815772643077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31785878-2	2.53554292698458	0	1.38972326741488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88420175-1	1.74267686274476	0	1.51558825492868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50627768-1	5.45185646004241	1.00734661620809	0.709102517273901	1.42059376700673	0.155434891561581	0.850700579885278	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60843840482865	3.70797273052172
Merged-chr1-88474753-2	3.26727877305974	0	1.3485462241968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66308139-1	1.74169901713965	0	1.48002734258248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64929719-1	5.35517362999308	1.13495487226756	0.695124247790666	1.63273670264679	0.102524384678376	0.633229920350757	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71916247178198	2.48366051229539
Merged-chr6-113748415-3	5.81220279030023	0	1.29401815649719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34281903-1	5.60583856325732	2.96820907516445	0.95282884906058	3.11515449819859	0.00183848586768626	0.030414606964513	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45159865713983	4.50831231808857
Merged-chr1-177261018-6	17.0944991605965	0.190293654345515	0.446504591638287	0.426185212670044	0.66997289174712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5112267726384	3.73453626897437
Merged-chr18-57826643-2	5.32827683923034	-1.08533667040047	0.697569236437034	-1.55588379433707	0.119735727631393	0.709296605729402	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67149925822889	2.56424119785219
Merged-chr9-86478533-3	8.54918673772151	0	1.31350900935299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-13787643-1	2.26413060460061	0	1.36742866003448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20083023-1	5.45231057485062	-1.48563536211841	0.751862654395585	-1.9759398254894	0.0481615929038764	0.361228702115015	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9964353281845	2.27624770054806
Merged-chr4-65565680-4	7.26366034601321	0	1.29413921679848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53180151-1	1.88527951481553	0	1.46680299604058	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119121424-1	2.19686209961791	0	1.40226022543601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90352430-3	3.96348602170065	0	1.3822559895895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21081517-1	2.22257836978054	-2.20142450908605	1.36559713764926	-1.61205999074923	0.106948885933833	0.653208888702891	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16101964402179	0.581381506691384
Merged-chr18-32349050-1	3.16628222418785	0	1.4152113182401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-77969388-3	6.13562395468336	0	1.30864123801755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30992362-2	3.13842946047297	0	1.37642751699234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34765953-2	8.77735919126101	-1.34276674756147	0.850166882762303	-1.57941549451873	0.114240785663567	0.684878750456097	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67603449733836	1.50282389800248
Merged-chr9-63614759-3	5.30765581393904	0	1.31247611441359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90136973-6	13.9497640203321	-1.15933573135262	0.610461594973345	-1.89911329541253	0.057549581380953	0.411718299202951	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3517893299058	1.78671256729753
Merged-chr8-22962222-6	13.1974821697616	-0.762434794443095	0.627914107739123	-1.21423421618656	0.224658298015481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17625233549544	2.5473977117727
Merged-chr6-72955060-4	15.3877955252815	1.42033121678512	0.505241488258817	2.81119276581961	0.0049358204725301	0.0645072249195903	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88815681748114	4.27779741445574
Merged-chr11-75566031-4	5.78631797329556	0	1.31711634108198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20509100-4	7.61859144185069	0	1.30814428819105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5986616-4	6.67837721447692	0	1.32987386428915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134734608-3	11.8732111510211	0	1.28576484982001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32179916-5	16.7837262219576	-2.82868223213334	0.964087619525264	-2.93405098752978	0.00334569242825259	0.0481770862531058	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56284441681426	0.844015785373878
Merged-chr15-73147890-4	6.46390739230067	0	1.30231845030221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14236285-2	3.53162376477413	0	1.33839130501059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37484366-2	4.17917571123048	0	1.31883809174618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38604662-4	8.81921028728178	-3.3530001013431	0.818973648674816	-4.09414894700044	4.23721869352333e-05	0.00160141869720633	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33754051867578	1.04220233489076
Merged-chr5-105651306-8	20.0000458724719	-0.0654174583571445	0.310710683307268	-0.210541387443868	0.833245152969477	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80492344956949	4.63287673710926
Merged-chr9-72089118-4	5.27428966609708	0	1.30067072258228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96500968-5	18.9664153007907	0.157154346510674	0.384719867467663	0.408490332316627	0.682913726771417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73340380171808	4.00844306192696
Merged-chr11-35842163-4	8.15542265488497	0	1.29765629664976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90126447-4	9.43565254960113	0.264341588151829	1.01351961903036	0.260815462462114	0.794234819724346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	0.581381506691384
Merged-chr8-56767321-2	6.96942698653739	-0.216712754779598	0.57719483685107	-0.375458581649639	0.707319444145099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17466942258404	3.77823341574812
Merged-chr17-36903762-2	3.2934834558152	0	1.35458686412421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51387342-3	5.40990675638331	0	1.36607637791311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102448478-1	6.14930794807569	0.335393066624624	0.636509628385982	0.526925362425532	0.598245420483809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56241274988402	2.77637591504923
Merged-chr8-45439375-3	6.37783224596885	0	1.29951544881802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134321618-3	7.69488140118273	1.76435353337602	0.457368305403974	3.85762089880198	0.000114496049710904	0.00352358088839174	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90569794004611	4.71056478532561
Merged-chr11-47075221-5	10.4023309477508	-4.23971500106607	1.01125550403852	-4.19252600765531	2.75865444403332e-05	0.00113446842857018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8051598645248	0.306240821987646
Merged-chr8-41100527-5	14.8953031813212	-0.181545451952294	0.499475567105333	-0.363472137394877	0.716252222906463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97224218617804	3.77632770422068
Merged-chr12-12289378-2	3.61695077952717	0	1.34551303807362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97936538-4	6.4940833562686	0	1.3325137418849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104460293-2	6.58004892479686	1.0981516554142	0.890208968113639	1.2335886232883	0.217356234450971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01232198676925	1.40000983364339
Merged-chr16-95821179-3	6.02025620779118	0	1.30487247845624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96564040-3	5.43374333475075	0	1.31069293374613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45795842-4	5.52255989002956	0	1.29957485500897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122064737-7	19.3061546565292	0.31384147169137	0.463915773833561	0.676505282624787	0.498719893213903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28690497734585	4.61920610316814
Merged-chr8-103482480-1	2.33527272155301	0	1.38119661667256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131142814-4	4.3661917762368	0	1.32027846897138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70004597-1	5.25955413282569	-0.904984197506822	0.656878943958412	-1.37770316103193	0.168294955006288	0.899288750498069	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98146418212097	2.03721561773135
Merged-chr8-122163210-1	4.97725809454445	-0.79470974303277	0.641017041617492	-1.23976383065802	0.215062759972184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20570107869263	2.11197723984608
Merged-chr7-65486402-1	2.77624932247532	0	1.35929354357954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57183038-3	10.6477063978232	0	1.31358393554926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67033434-4	9.43242309525405	0	1.31409145881431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150648096-4	6.96202915483958	0	1.31229757579787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164792559-3	5.188449676256	0	1.34150586197691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46334278-2	3.83489428615629	0	1.32492070158239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182937824-2	4.78872836772041	0	1.32027308506294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52141420-3	5.16571072166005	0	1.30336122923327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43394675-8	20.8721664583915	0.541983366602434	0.398981651443911	1.35841677089912	0.174331475644668	0.923450878243889	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20165650442948	4.8073483566238
Merged-chr1-87026166-2	4.12572611160546	0	1.30621653435564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98339260-4	7.91788136702287	0	1.30527987541612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40497143-3	6.49699489313741	-0.820027593722971	0.631067650122031	-1.29942898128973	0.193796751163285	0.995428588391452	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69504647626467	2.32184109428021
Merged-chr4-132800089-3	4.50999789654698	0	1.31843761291935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48552467-5	9.87978120385922	0	1.29383927858897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31170083-2	3.17957702133801	0	1.38463515898475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12867549-1	4.22612071514821	0	1.31591732323217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91757525-1	4.55650006132774	1.66183352526922	0.716294923261277	2.32004090955011	0.0203386643912893	0.18970173612806	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32199264231459	2.37833055520499
Merged-chr6-67087607-2	2.04552213045581	0	1.49838305329218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16993899-2	2.59668783418041	0	1.49517770500636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44724524-1	3.91580261526428	1.15646841648984	1.09458152621476	1.05653931552188	0.290721888671577	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.709714069046076	1.19133112147929
Merged-chr2-102360740-1	3.06743744951648	0	1.44032364249512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111984815-1	3.98565003305187	-4.2025312799449	1.09942304366322	-3.82248789869119	0.000132111963983643	0.00395645664458074	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10301770456227	0.469435083901436
Merged-chr11-46806436-2	5.3123115987141	-4.66530417019831	1.08184950798205	-4.31234116739618	1.61534920052424e-05	0.000743880259742473	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42088761268319	0
Merged-chr13-73791451-2	3.20357052310439	0	1.48449497862788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35076169-4	10.3904938981758	3.41752707568333	0.902030025819951	3.7887065594926	0.000151433654211388	0.00439999269368492	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	3.21175319635018
Merged-chr7-101912103-2	3.0556768393174	0	1.37501967162497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28518218-4	8.3738779894112	0	1.31419525340745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52591079-4	5.93121353031966	0	1.30623886349174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80788517-4	8.69505364054572	0.853643598820787	0.63167324039853	1.35140060434128	0.176567140325565	0.931370279384857	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86676653006404	1.85419949900662
Merged-chr8-88621625-5	23.8157896425351	0.169396064480383	0.333991409001979	0.507186891383122	0.612023691825424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35977927643861	5.43768560634294
Merged-chr14-76899473-3	13.1561718704191	0.60685255351496	0.578238105618021	1.04948557976192	0.2939546886789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53052566837676	2.52250096655787
Merged-chr14-104002681-3	4.72128618716983	0	1.37438642805391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29735873-6	24.2417605845352	-0.627302721158629	0.388583930440735	-1.61433006364195	0.10645585243789	0.650927681613772	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29757044749086	3.58014563153256
Merged-chr4-156033724-8	19.1915378724999	1.61229520422811	0.471261736109472	3.42123088018667	0.00062338386793312	0.013056295587807	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85259479917538	4.9950231853406
Merged-chr5-151069997-4	6.97400804561157	0	1.3008194817695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64022455-4	7.92483319606213	-0.93337686085264	0.735343658665897	-1.26930701020259	0.204331587073681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90385254166421	1.82866868473699
Merged-chr19-29355711-4	7.90990809914881	0	1.28899150196042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43166327-2	4.57566587031268	-0.303182899614089	0.764064971530882	-0.396802511449558	0.691513098586648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97030045887148	3.17401694765397
Merged-chr9-82942069-2	5.31512969206284	0	1.30992832448323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8962518-3	8.36171823930043	-2.63300650017803	0.784476930994994	-3.35638486760655	0.00078968592514369	0.0158048442463827	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93785532092837	1.14490468848716
Merged-chr8-83235916-1	5.13924361256704	-0.323774248474344	0.724890699852092	-0.446652507116462	0.655125977840402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09984776446849	3.18272394346079
Merged-chr19-57591466-4	10.1639563822246	-1.00865282953647	0.666288573298678	-1.51383780235463	0.130066982294852	0.750412826674893	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61748589550169	2.30127498244712
Merged-chr11-29653950-8	23.4116151018597	1.58595162819844	0.356763543889131	4.44538590156874	8.77342356509579e-06	0.000456455522519705	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69959449877037	4.65225619087515
Merged-chr1-80639151-4	6.67747835566798	0	1.30662559650431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78536957-5	13.6922437340029	-2.63195046015436	0.62140435176965	-4.23548765414827	2.28056234054795e-05	0.000975298604093234	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34293298758355	1.54084633208408
Merged-chr9-45412498-2	4.71474274186528	0	1.30848976326491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99511900-3	8.35542464722562	0	1.2962746878057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113396078-1	6.10539339850146	0.933529207424334	0.803759866340226	1.16145287481818	0.245457777004047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72028089147283	3.0347584185104
Merged-chr9-120037484-3	18.4023197043466	2.45189044181126	0.545581124459606	4.4940895714452	6.98682170398789e-06	0.000381102546801997	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07947321179646	4.55261256135935
Merged-chr15-19869251-3	20.7175624404037	-0.0793848896627057	0.897533783716385	-0.0884478011891649	0.929520770279048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60450064907923	1.50228770993649
Merged-chr1-171377323-3	6.01957163361265	0	1.29366246586082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57975645-1	6.12856442355552	0	1.2960182230238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56824349-3	6.46209493354957	0	1.31262461403612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30550213-3	7.08608241571972	0	1.33300751011686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28215488-5	12.1028205666587	0	1.29058644469981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67945564-4	7.62810521029956	0	1.30940856380055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101815752-2	3.05513245728476	0	1.3460708328917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116087367-2	5.49520448619139	0	1.35162470607374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53449350-1	3.76713389910046	0	1.31433891165153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101972843-4	17.646825103059	0.476817470256526	0.448964400977206	1.06203848059823	0.288218216324591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33331566359123	3.61377161740381
Merged-chr2-117346713-4	6.2857305942806	0	1.31668691358969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44818002-3	4.51355163767699	0	1.35443666921327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38986174-1	5.72311936231098	-1.99628718697955	0.665199209058644	-3.00103662150259	0.00269062203856507	0.0408412050481006	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14653480961135	1.81050397723341
Merged-chr5-116012743-4	11.7562231381999	0.452722378965567	0.532606200473176	0.850013346752931	0.395317665896288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89402156752225	3.87183328779457
Merged-chr7-16426315-4	6.53929881277761	0	1.29832582868432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122948926-2	3.46637078895481	0	1.34873972482009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93967244-4	12.663156152639	-0.824927096797242	0.774100791485924	-1.06565851097214	0.286578039059116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90779831215259	1.14490468848716
Merged-chr10-7820386-5	8.73128489611635	-0.643056256242811	0.628462319082427	-1.02322165819216	0.306203054878841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07403344019214	1.65946941398048
Merged-chr15-39735394-4	6.53045327968205	0	1.30289562062602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120876398-4	10.0895166919346	2.78471990664033	0.852479017619291	3.2666140152249	0.00108841969320628	0.0202574404079343	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	1.96070466280571
Merged-chr8-83159150-7	16.0429825410395	0.300011081639026	0.454137137191392	0.660617811382796	0.508857443567032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95354401089318	4.16410171666186
Merged-chr3-52391288-4	6.06285835096672	0	1.31239406708918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56301977-4	4.4478970689331	0	1.31334532979483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44544241-4	6.45967057042468	0	1.30017506365352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157446545-7	18.0150555096685	-0.0605150956441481	0.425626075630527	-0.142179013714093	0.886938608005855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29270192076704	4.00225265130538
Merged-chr7-91494443-1	3.71613391948744	-0.534110124386402	0.988632664833634	-0.540251342470341	0.589023709379017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84993852157442	2.2484890300238
Merged-chr19-24451009-1	4.09120150400077	-0.522109966036608	0.935613084444587	-0.558040470700077	0.576816748879268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69681475617648	1.03956264035389
Merged-chr15-36935425-1	2.63250919600061	0	1.36036727669083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-70039112-1	3.38543161974917	3.89285487293959	1.3981877364525	2.78421471698541	0.00536575002511005	0.0687510394393807	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.62128842389662
Merged-chr8-13669709-1	2.56479121522015	0	1.38836685172466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9723449-1	1.52137549359021	0	1.52938612904486	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150335315-1	2.62485724159815	0	1.41679268560351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84333079-2	1.92261010109518	0	1.62138424028626	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80069482-9	26.6784050178705	-0.175565018011624	0.365939448120459	-0.479765215019485	0.631394349834038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55991514223824	4.27914760208779
Merged-chr7-80799390-1	3.5615317068558	-1.70922638495334	1.16409451276602	-1.46828832728712	0.142025920271693	0.797370961412146	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32474793166649	0.306240821987646
Merged-chr3-135200829-1	1.97331607719274	0	1.40405999366891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131077030-1	2.57486757400181	0.357980260802453	1.08609149998658	0.329604145513408	0.741699089833963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00113496145082	1.11779166918352
Merged-chr15-73505938-1	2.90235101114661	0	1.39059172558747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97881576-1	2.14567762993093	0	1.39191874117619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-114624843-1	5.40001108320573	2.46031653215816	1.20792092779773	2.03681919531254	0.0416681639878879	0.325154984947758	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr17-17648962-2	3.57365582443007	0	1.36061621876352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52525190-1	3.4453217050167	2.67065331775535	1.77082908246646	1.50813725852954	0.131519401094436	0.756537569006777	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.666166562322424	3.28522854980009
Merged-chr3-20295143-4	8.66729542870928	0	1.31364193762308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63590639-3	4.80637679982882	0	1.34690627256695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89264621-2	4.89745405604762	-0.250139353487413	0.918279352120472	-0.272400063128716	0.785314424164606	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56953304029464	1.21653520045322
Merged-chr4-147432483-1	3.48123942909706	0	1.40337611733162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107837781-3	11.8819034346455	1.65406972201031	0.631899155724678	2.61761660389209	0.00885462299912909	0.100962169691343	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72350972867744	3.48762807179304
Merged-chr1-165132726-1	2.80547890835817	0	1.34274239992959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44299501-1	1.66541468362928	0	1.450277607042	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125351809-1	1.88486501777714	2.42459503424482	1.42603668689323	1.70023328048247	0.0890870545888638	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr1-161200095-2	5.53371725566748	-0.96775712575586	0.743907237136329	-1.30091102417721	0.193288912179187	0.993757455173969	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.994103237793	2.21167959300009
Merged-chr3-8981032-2	2.82512889678746	0	1.35571013791252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4078473-4	6.28953332409716	0	1.34125549581944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117543569-1	1.96042294714176	0	1.3848884931752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113115523-1	2.4460866331085	0	1.41929789771751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-66180-1	1.97708737171785	0	2.43325274033032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70874266-6	13.8395584641837	-0.67459003370656	0.604934179526612	-1.11514617050479	0.264787788967868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90231187061201	2.0292145465841
Merged-chr3-79161281-8	23.976831789141	0.495436579797308	0.334268678912234	1.4821507698823	0.13830018239849	0.78306591447983	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30112339691335	4.86689003102205
Merged-chr13-58512190-4	9.5146021051073	0.343712622263046	0.818056178988233	0.420157723994148	0.674370236137981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37444898294419	1.9094343094868
Merged-chr19-43521324-6	19.2831786234552	2.11818352563071	0.459589765059214	4.6088570431019	4.04888595914582e-06	0.000245434602863027	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22513151311838	4.15680708310539
Merged-chr3-69185369-3	4.65915948288776	0	1.31306347412502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35114177-3	4.59047278540674	0	1.3327829328371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130987671-3	4.42021396844297	0	1.32088207994259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51663371-3	5.45544219820481	0	1.32969567020382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75739269-3	5.65910881874469	0	1.32879907653844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60757328-2	7.82556025101613	2.33684058845629	0.844324240096247	2.76770519840803	0.00564524947857788	0.0713920303696813	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28076517255747	4.92293130141936
Merged-chr10-117078471-4	4.70567538540654	0	1.33138917825501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75511691-4	5.93701236151423	0	1.30732003546868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160093358-3	9.46718667947812	2.41423473494342	1.18565706372847	2.0361998496863	0.0417302913595392	0.325406637133705	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr4-88464792-3	9.58612906184759	0.975696113497464	0.687917838656511	1.41833233370278	0.156093760927766	0.852922727785416	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72464333751141	2.90012233499004
Merged-chr18-49643922-2	5.30331431971797	0	1.33744862677831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44939509-3	5.99713989366176	0	1.38444539928333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32085772-4	6.06919667361456	0	1.29917602332889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65515108-4	5.14119373000783	0	1.33824213087098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91187667-6	11.6324605880975	-0.240383559831909	0.551169107562555	-0.436133949696422	0.662739546573178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32843461436507	2.78608253865023
Merged-chr5-103819874-4	4.4977307769878	0	1.31113175736389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72380857-2	4.70763199124087	0	1.30730898147499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134036111-2	7.34949854500555	0.33394646200876	0.660739854214271	0.505412924434348	0.61326884307019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31608660054162	3.42866575664238
Merged-chr18-49990497-1	4.65421946526744	0	1.31211027059412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34258238-6	29.2099076992442	-0.755377768649267	0.406370983009925	-1.85883786055368	0.0630501241597892	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67082896217752	4.85256724011526
Merged-chr3-95654719-2	5.12120399846438	0	1.31622038849296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24420561-4	6.30616133578306	0	1.30504346993562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52119854-2	4.87871083792115	0	1.32392886246088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126928984-2	6.22649443926764	-3.57695537824776	1.02298987455072	-3.4965696799479	0.000471281393682695	0.0105165251254165	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1114402963556	0.581381506691384
Merged-chr18-66270847-1	4.33542311020743	-0.667675790445916	0.819766120826796	-0.814471071056846	0.415375138312719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96819956757805	1.31734301959449
Merged-chr6-32539279-5	10.8521229806394	-1.08133148554803	0.556708812829985	-1.94236459101692	0.0520929787218625	0.38187881843828	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34217075175179	3.24672094980372
Merged-chr14-66811185-4	6.09148260740979	0	1.30392080598877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123848349-7	16.0885731050321	0.474718916435127	0.565335888634865	0.839711268961619	0.40107029407112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14664704524588	3.34857012394895
Merged-chr17-67244950-2	8.2612385215266	-2.13596539149238	0.915490337519663	-2.33313810529049	0.0196408980857365	0.184752320175196	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42172197540729	0.581381506691384
Merged-chr17-87257661-3	3.33584249562876	0	1.37108652294793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45692957-4	6.5315744541609	0	1.30423049378962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136117256-7	61.4823757970464	1.46349121573661	0.29820794593367	4.90761978576567	9.2188351362817e-07	7.52515880036919e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90968863721811	5.32230309992261
Merged-chr14-14686371-5	11.3353705135714	0.00447506201141155	0.536501132274174	0.00834119770156349	0.993344764309054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0037295247806	2.59259261975158
Merged-chr14-40904862-1	3.27568243258779	0	1.35051078805551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38199708-2	9.69631782996473	-3.31781363133726	0.751507973447472	-4.41487482310681	1.01068456020314e-05	0.000509600256720946	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4904158404221	0.735627456805112
Merged-chr4-134779492-4	8.67909269699351	0	1.29198608866059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108759914-3	4.54959248834799	0	1.33693119788934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-24621627-4	5.2920277195926	0	1.32594170206561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14197431-7	26.6995133728377	-1.29028685113331	0.348229735793893	-3.70527476119096	0.000211161704575569	0.00570660576807076	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17798042797073	3.85671780618854
Merged-chrX-151496806-3	5.50643378708408	-2.39340815788902	1.15790100282638	-2.06702313241532	0.0387319742839185	0.308693693323202	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.983047685808099	0
Merged-chr11-116464049-3	4.05409319229781	0	1.3101297145313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100048369-3	5.72318838591092	0	1.31091870717989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182959353-3	6.63080755846621	0	1.29912098872444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26753706-7	16.1044925222861	0.10943373933376	0.381375577271233	0.286944801543836	0.774154585560774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10284307398879	4.25280606659289
Merged-chr11-20914135-6	14.9752235050981	-1.22606176363884	0.477122447540036	-2.56970044054774	0.0101786489003628	0.112429680703703	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2191013361332	2.50300837523146
Merged-chr14-19986213-4	5.91833154586143	0	1.30658333687773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70693868-4	12.0424398947573	2.08106045393539	0.535535901092003	3.88594013901203	0.000101934624589792	0.00321867898473283	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72716233108758	4.10067819634821
Merged-chr5-43672301-2	8.84526035687365	2.26497233799908	0.814909646792459	2.77941529703835	0.00544568536794616	0.0695995354406285	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	2.30923017122179
Merged-chr2-120559032-2	4.30541164876695	0	1.33226916662903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20961566-2	5.55666897240386	0	1.31000372422699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60617971-3	6.74839649874694	0	1.31535169734421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19850886-1	2.43199140595351	0	1.37813657935315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36684260-2	4.5780646212852	0	1.35719019110274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126702679-2	3.63767838562251	0	1.35367582681438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-147125122-4	9.71412278525266	0	1.30281261912356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119483460-4	9.23482474286662	0	1.28966857678832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143041222-7	19.1430631863564	-0.233082412274425	0.404084720885947	-0.576815702814491	0.564063960650257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2379246647847	4.05282083714315
Merged-chr15-8633723-3	7.72749909689328	0	1.28809428481956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9881999-3	7.04596743417128	-1.23946067600747	0.967483720275012	-1.28111786279478	0.200152270526529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48383133409366	0.916190436775555
Merged-chr1-191278513-7	25.9488922851933	0.159325399632612	0.278997592392728	0.571063707991927	0.567956458415047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44876265972167	5.57111026960521
Merged-chr10-80571046-3	5.84779414167649	0	1.31426740996674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92056178-4	5.95940308465582	0	1.30682270953259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97868278-4	6.93586661830715	0	1.30151591256029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84091721-4	5.68714690775582	0	1.30256861656364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156725541-1	3.51672815338669	0	1.32750757871409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95672665-3	10.3197059531023	0.123888106155605	0.59721606809453	0.207442687452936	0.835664147800163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65334050738036	2.77561021306577
Merged-chr9-108710930-4	5.93185800284223	0	1.29942333896929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72694151-4	4.51129952665597	0	1.31283320644863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80215313-4	8.61890397890438	0	1.29592412901619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26342347-5	19.7165008461989	-1.28613356826246	0.381932569296373	-3.367436222137	0.000758705731065889	0.0153066948756504	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.6771563199346	4.50405921695792
Merged-chr5-66090239-4	6.93875381345219	0	1.29835499022285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110379784-2	4.17409611671487	0	1.32255327991632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109463021-3	4.88082484546395	0	1.33156766906822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14087352-1	3.85328748447489	-1.61472327194599	0.757668755760356	-2.13117310126579	0.033074884149872	0.276063369672504	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55698359463145	1.92713101668536
Merged-chr9-32487606-3	4.34891855340483	0	1.30384802470148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70232108-3	7.50209356879534	0.50406022521448	0.664029454890661	0.759093172000147	0.447796823363791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6831355152091	2.63048732282332
Merged-chr4-106233490-1	3.41622415969931	-0.237529899890709	0.806237141126887	-0.294615427365094	0.768287675671019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61840421356542	3.05043424441622
Merged-chr4-32768232-3	6.06732688955138	0	1.31573141330999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124990485-1	2.95791949444818	0	1.33017366276501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94602782-1	2.69375194508611	0	1.35614630224232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82175002-3	5.30089537055272	0	1.31294762470171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117534073-5	13.8703259202847	1.94822122601525	1.24720017305622	1.56207581437485	0.118270129720265	0.702951398379251	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr6-98332972-8	33.8478212409399	1.55425544010389	0.368717542349986	4.2153010410028	2.49445220458803e-05	0.00104824741968495	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14225831971188	4.60581143264561
Merged-chr2-43761954-4	7.68973027307333	0	1.30721672862934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101597911-4	13.5335281620243	0	1.28612841147607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118200058-4	14.0829798014714	-0.339792250103468	0.489627244107015	-0.693981501628209	0.487693809786843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06814387407337	3.27274575417535
Merged-chr14-21941748-2	4.17000208000402	0	1.3274020719514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60912025-2	3.55486079256773	0	1.35280905367234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101759459-1	3.73570310401799	0	1.34919340365661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161058704-2	5.10303450750294	2.21433318633855	0.748279854488733	2.95923132642868	0.00308407498098027	0.0453186336197745	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18896396182328	2.71401670368601
Merged-chr19-43959394-7	25.6238532856275	-1.26338581401771	0.28791914493594	-4.38798821210309	1.14403974742823e-05	0.000564502129690186	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76411536149696	4.51628912945347
Merged-chr3-41363553-2	7.6720674626367	2.71832023957459	0.633229103659875	4.2927910670301	1.76441022756016e-05	0.000800119019640155	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84986276280127	4.7385851556144
Merged-chr15-25563875-4	11.8739960017151	0	1.33735048714388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30733910-5	22.203588290121	-2.88106648168757	0.555069532595273	-5.19046049639386	2.09774625991705e-07	2.27706523422823e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.43584156656484	2.26292282237182
Merged-chr3-133754436-1	4.04819582093231	0	1.31970221250847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61987146-1	3.81824440393567	-5.25463670682625	1.26231801614204	-4.16268851401309	3.14522286317116e-05	0.00125936111039695	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97100656579703	0
Merged-chr5-125074679-2	5.54226312123558	0	1.31378606460179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89643858-2	4.53344946916709	0	1.31896700183108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172368926-6	18.3056445303671	-0.603822357259342	0.372873393427034	-1.61937635643478	0.105366310811036	0.645963451042105	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33750240365638	3.88383405399404
Merged-chr8-70647034-3	6.02730440634309	0	1.30652780155381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117437171-8	26.923112428017	-0.132609004302938	0.445835650589886	-0.297439211349479	0.766131211157777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23288881821427	4.11671115861119
Merged-chr15-98957384-2	4.40656299494574	0	1.31136166647406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74029214-4	5.27434808777017	0	1.30210268722943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102385050-3	6.56416565034009	0	1.31428907218222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73566289-4	5.64775487019036	0	1.29800386598027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155140942-3	10.3549439482861	-0.855096834987389	0.528634560363985	-1.61755757020241	0.105757979330007	0.64737088054839	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18230159349509	3.4129085652566
Merged-chr4-95001609-4	9.17531875695117	-5.17431969412068	1.04505185829429	-4.95125639273643	7.3735880487733e-07	6.28206629250509e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0350185180991	0
Merged-chr11-8612271-3	4.24306489431885	0	1.4663277704592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132893092-1	4.06727602165825	0.196984021143617	0.994972126659031	0.197979436675337	0.843061152440992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97128677647311	2.11736049306998
Merged-chr10-20753076-1	3.06401829322587	0	1.36629829738972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191405347-1	4.55641770910192	-0.109734764855588	0.97790526802296	-0.112214105439313	0.91065364528541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16833078248337	1.48233004913473
Merged-chr17-43512612-1	1.85700179114481	0	2.20939615410597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129809600-1	5.54782860525025	1.657239437802	0.759104372827112	2.18315095673865	0.029024695045994	0.249887710471084	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2683195048739	2.5824508526072
Merged-chr2-58130233-1	2.79987920196804	0	1.53983744223335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31460087-1	2.92918696940599	0	1.36115917555145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100460917-1	3.05791223054602	0	1.35043404224759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153262906-4	10.9904210214045	0	1.28514956123828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53443124-1	2.86655944147896	0	1.33302247498594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14129207-1	3.10223318566441	0	1.3413679825702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89989030-1	2.58501778595338	0	1.35325319367702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119453805-2	3.74018040871462	0	1.33080068603804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44199781-1	3.30171150794417	4.33670516910276	1.17098084183465	3.70348088898547	0.000212661208930392	0.00573527006139718	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.58328144429995
Merged-chr10-39387220-1	2.3660194438494	0	1.45113292759131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45070497-2	4.55912510584885	-4.35475526679411	1.09077568249558	-3.99234722287801	6.54224824156862e-05	0.00226883640336494	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14377186425258	0
Merged-chr10-111068203-1	7.00632493425855	-0.232143710108159	0.789143175928208	-0.294171852699742	0.768626587836386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53841453332434	2.53388634203561
Merged-chr2-181411270-3	5.06614231882704	0	1.3289825181115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49497088-1	1.97241976797169	0	1.4037978905013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106236308-1	4.68047093409775	2.57109055695134	1.17901460802331	2.18071136647063	0.0292047717987541	0.250975147022802	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.07982873328226
Merged-chr6-29686159-2	4.41045682989384	0	1.38098322599351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7583351-2	5.79306105924424	0	1.3268617844139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83740676-3	7.79436636716164	0	1.32466072440603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58231949-3	6.89637137119306	0	1.32182727329285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103058406-1	3.24143425330641	0	1.33237916586991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56808828-4	6.44606961589612	0	1.30356953708163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88235895-1	3.77790714093302	0	1.35167741915431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99183080-1	2.23364174225472	0	1.39489831890055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10010422-1	2.45175363282095	0	1.34248228611837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33962798-1	1.76252542557002	0	1.47940888602641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54767296-1	2.76869126273657	-0.392829635907818	1.2185488069144	-0.322374970685449	0.747168643427817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57242541885223	1.94794910654401
Merged-chr9-70237776-1	3.42939443709452	0	1.32622073556442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22814850-1	2.72490859272357	0	1.37566322284601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48938406-1	2.54193441470828	0	1.36759705848499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-53018220-1	1.20323569928577	0	2.10243984554259	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174675860-3	4.86549407077909	0	1.30068670262771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46793084-3	7.42437328609565	0	1.30214955407265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82976139-4	6.31433987621482	0	1.32960415076478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58504814-4	7.44854392279946	0	1.3034835060623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45275101-7	19.6436805082816	0.259938954707346	1.25704502083634	0.206785716023442	0.836177212016351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.491676401566762	0.382164212378408
Merged-chr5-129864554-7	24.3338659695952	0.441140799474789	0.290017637380056	1.52108266055796	0.12823909517004	0.743031735501101	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29381597633245	5.62700926784906
Merged-chr13-46735989-9	24.1473774465797	1.03173381615169	0.315785426031441	3.26719896202228	0.00108617315449546	0.0202329164634152	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97548598522863	5.04288079947207
Merged-chr10-22141054-8	34.8717371846602	0.487533207667919	0.28001769873994	1.74107997409372	0.081669561096028	0.533338444177164	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47421710232498	5.98824248288582
Merged-chr14-48131402-5	13.7556517531737	0.135850677892479	0.41442086968796	0.327808486080269	0.743056470596904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17109183107203	4.45393425023669
Merged-chr14-36867173-4	5.63821766868216	0	1.30034574694212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87890061-4	7.98969670722907	0	1.30030847432882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4608018-3	4.10733271698009	0	1.32756655174156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77801757-4	5.16464681467491	0	1.35581776633633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70376355-3	6.29560220357192	0	1.29311862024027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4034452-4	5.79915497910423	0	1.34403303285579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11808612-5	10.5669809906321	-3.11546296381317	0.938858652650379	-3.31835144195378	0.000905504753466539	0.0176156932479977	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34023186459788	0.609949614787909
Merged-chr12-12269347-4	9.58511591015293	0	1.3327594253148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61968666-4	6.42336337752109	0	1.29424153368134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4618789-3	9.22496898282876	-2.11351734847455	0.574958503000362	-3.6759476335168	0.000236968132052583	0.00622134172643957	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24530360236291	2.05066483796074
Merged-chr7-68157612-3	5.80032220121509	0	1.29953141540201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139204796-5	11.4150680058391	-1.91938054253042	0.654424277469536	-2.93292991811382	0.00335779677074184	0.0482578738149252	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05365080675396	1.63879159991986
Merged-chr9-50965548-1	3.47619742026588	0	1.32565465731721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128392057-2	5.87207562907907	0	1.30948151160154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123023367-1	2.35600390727808	0	1.35373660999237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91312814-2	3.7554830414822	0	1.3406633381244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60962983-3	5.74583492621809	0	1.30142766390713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14816387-3	11.4649453864124	-0.979712112333053	0.437674018451479	-2.23845161245655	0.0251916195001982	0.223907993452115	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31671250815667	3.38735180703828
Merged-chr2-157373898-4	5.76337072039037	0	1.29849775619381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149206468-2	6.01319174137554	-2.43771623228003	0.724766463301806	-3.36345065026128	0.000769745971386576	0.0154721071197254	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9529157931355	1.31734301959449
Merged-chr1-16227862-3	5.05516409877619	0	1.30539860405957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57356314-1	3.11793626790038	0	1.33813009106952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125015953-3	4.67167301390798	0	1.31052930612936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96577390-4	11.5818843125532	4.30608726624608	0.977821182621629	4.40375739734034	1.06391916072295e-05	0.000531927019713865	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.13691092425662
Merged-chr16-4587945-2	4.58775510682668	0	1.33370703845654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100604705-4	6.34967712339752	0	1.31039608241043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97009220-4	6.00032526981609	0	1.29353125004838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102664233-4	6.74118313275788	0	1.30897097231363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-929-1	2.8851565594918	0	1.91016067186735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103768141-2	4.87885584981588	0	1.31021974731108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57473442-3	8.53059935621927	0	1.28916847047057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106236474-3	9.17896326987314	0	1.32728889622078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-60345629-3	5.49571954873353	0	1.29969029073271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152763525-5	8.9158154687017	0	1.32214993618789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12957485-4	7.15445024124827	0	1.29915151452952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64300135-4	8.18225056509552	-4.34870640862479	1.02315540511866	-4.25028923941468	2.13494642887842e-05	0.000926978135159398	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86264457413342	0.306240821987646
Merged-chr10-42231376-2	2.79089055690288	0	1.47519160973753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70385044-2	11.3010129236205	0.798010268801799	0.535299329123192	1.49077390048092	0.136020866268057	0.774128862671914	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.253300541751	4.26216812371567
Merged-chr4-105582326-1	4.14050774032704	0.918612535329291	0.937976693618588	0.979355395052949	0.327404408393817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40679061316474	1.83283749367074
Merged-chr15-58617303-2	4.35513709016042	0	1.32322824480842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3897319-1	4.77891510138364	0	1.35200414853937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170863233-2	3.0735397180187	0	1.35189213444111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47127237-1	4.98574480212589	-1.85718260173542	1.25951531574601	-1.4745216501281	0.140341192880649	0.790853362364511	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816279004064202	0
Merged-chr3-149084339-2	3.27560514893852	0	1.39690872920997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8714074-2	3.58458436755765	0	1.3127844250506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24131644-3	5.97993355358836	0	1.30054696725313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139578819-2	7.40371938246187	-0.367587622624674	0.860753184387338	-0.427053456544936	0.669340392373431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98947734408237	1.62042974503458
Merged-chr16-87562653-1	5.21694739129875	-1.86925335186207	0.770952642901549	-2.42460204147815	0.0153251757976896	0.152286943077224	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91989112740271	1.30807038797559
Merged-chr13-119596909-2	3.86688151283798	0	1.39308611140679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128749670-2	3.4183918550801	0	1.35534602329858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99544120-1	2.62018897432661	0	1.39521874364831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168579286-4	15.4216463156631	1.93961434129398	0.480282235178167	4.03848862028897	5.37967027072638e-05	0.00192624621101855	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39879587397973	4.20778267426796
Merged-chr17-86232415-1	3.56103038154653	0.488860229362323	1.07850734767832	0.453274825076232	0.650350858371584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2642979481152	1.40264952818025
Merged-chr17-43055510-1	2.34905591602717	1.85967279971926	1.2810438664777	1.45168549523018	0.1465890742203	0.815406054968008	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.851599296279844
Merged-chr11-63914550-5	11.8847117681102	0.552555946520742	0.516520667514482	1.06976541554409	0.284724913088919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2863658115952	3.17216837611484
Merged-chr10-7851996-7	26.6815866506291	0.689359456236654	0.363221013120001	1.89790631966797	0.0577084237285882	0.412628805883392	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77082370019402	5.52588877411382
Merged-chr5-138732016-3	18.4933218068567	-1.01791253700952	0.491087365713729	-2.07277280597542	0.0381934283837082	0.305594192624195	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00800494957304	4.82782199061846
Merged-chr5-115897286-4	6.6104515100215	0	1.29793600055275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50107488-4	7.0327917830056	0	1.31370516703593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75716633-1	5.13090705842539	-1.23539519891115	0.993344245102542	-1.24367278010819	0.213620017968108	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85073058285241	0.733321818366247
Merged-chr15-84341198-3	4.31091512143062	0	1.31723145859719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135767692-4	6.5303422417316	0	1.30501829955853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-84569746-2	4.60371787883739	0	1.36898190151476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65678536-1	2.51556123900132	1.08743247356815	1.04639801429831	1.03921496286225	0.298704773103624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.070069993895	1.00182956598795
Merged-chr15-80899475-3	4.94419663972365	0	1.33393009309556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25320077-5	11.1820253057974	-2.11989951610444	0.704040925712061	-3.01104586208591	0.00260349526518339	0.0397774144490703	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38884084235406	1.15307255889252
Merged-chr4-102518036-1	2.71330031072212	0	1.59322955781501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50245216-1	2.13938308526862	0	1.47325996143402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108913047-4	7.62504020866848	0	1.30002232241499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114479938-5	13.3148956854337	0.745602715601902	0.520410845577504	1.43271940225324	0.151938042440834	0.836901557810338	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59135075086378	3.15857388079295
Merged-chr3-82375435-4	11.000248751829	-1.12583329386372	0.569503988457478	-1.97686639019523	0.0480567348034917	0.360582775573427	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48937131449142	2.14242223062423
Merged-chr7-27409001-4	12.4040835875128	-0.247394917633805	0.447119675192393	-0.553308054554638	0.580052486596358	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94993809639183	3.35054972753854
Merged-chr2-92037098-3	6.71336448203045	0	1.31691952022796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35792052-12	56.3981420856176	0.211174991453237	0.224246841002456	0.941707765020084	0.346342278425203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.14040639878478	6.30858102493993
Merged-chr8-108662904-2	4.41308813823655	0	1.33365137492651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33932317-4	13.6750618968357	0	1.29293263725906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138955673-1	3.46854955437802	0	1.31750974924752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64717633-2	4.02428606473518	0	1.34262233203314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71039325-5	10.0266899507212	-0.0936353219549696	0.533480935408935	-0.175517653471898	0.860672900624075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91971972946588	1.8460126076219
Merged-chr4-83234516-5	16.0935492873445	0.56690269852269	0.552700291793862	1.02569639810164	0.305034712687852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05808206267894	3.37490620789139
Merged-chr2-102867930-6	18.9207827900795	0.622182043264678	0.437669263528719	1.42158039211692	0.155148100315777	0.849636773596836	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22770557986745	4.02504124214365
Merged-chr5-92292764-3	14.6113039411196	-0.353011463632166	0.392136785144282	-0.900225321891901	0.368000353188106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35986012507385	3.88536780950218
Merged-chr18-80225060-5	15.889798147056	-0.0795527641935438	0.427297983168139	-0.186176315656141	0.85230649660498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12958080572724	4.09623457674716
Merged-chr9-41102371-6	16.1025084207038	-0.0529747370487442	0.472854557204316	-0.112031778570454	0.910798209518421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83628081688033	3.99066107609785
Merged-chr15-63601724-4	5.41420933305148	0	1.30664384040447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76200761-3	21.9170252331993	-0.948718290081767	0.412224081665963	-2.30146255950796	0.0213654993256764	0.197252037148297	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22042176649765	3.2334626431245
Merged-chr10-97283020-4	6.75907590548842	0	1.29250946003575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38410019-3	7.45501150296829	0	1.34437241568352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103947065-3	4.59077008868362	0	1.3209393274903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35565647-2	5.38422307097255	-0.084335345587526	0.720729922667965	-0.117013798005413	0.906849119370505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17753571196002	2.84882240982172
Merged-chr16-10979601-2	6.50035586861236	0	1.3032262205328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52426128-4	6.09695768876453	0	1.30127198087775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127272829-4	5.22563570197914	0	1.31290324208085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122685448-6	17.3640844849011	-2.54268358831238	0.853936945558287	-2.97760109986813	0.00290513813763829	0.0433918072553398	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33704848926682	0.73596151290311
Merged-chr11-45678881-3	5.63587093513782	0	1.30951329136109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92998807-6	21.6917293976909	1.44011602915659	0.350453716159638	4.1092902222232	3.96877049603635e-05	0.00152286128499114	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63616455473458	5.00071089559239
Merged-chr2-58042091-4	6.75076095801623	0	1.3106623851665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69586725-4	8.97110825519882	0	1.29610771393519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171826209-9	22.6610270300554	0.807795944846837	0.314751870646904	2.56645319751901	0.0102744489734412	0.113200833353311	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28116329398271	5.13092853835588
Merged-chr2-90496450-4	11.1504139031046	-2.24553431623158	0.603572924448197	-3.72040266432513	0.000198905392074611	0.00544519134918623	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18774305516994	2.18607683658099
Merged-chr3-97278082-2	2.68526845884743	0	1.4605001416242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43975109-2	4.70045621813537	0	1.32868346938559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55355088-1	3.14686261633284	0	1.38947405153891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120935972-1	3.40997782530208	-2.40868988615831	1.18447158974051	-2.03355648799141	0.041996332706421	0.327129855409916	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25475668404501	0
Merged-chr12-86694617-2	2.20512982728448	0	1.57890701553256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34060788-1	2.39129272986567	0	1.42597597084906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122273326-2	7.1332648365327	1.4431148150177	0.628238953213601	2.29707949122831	0.0216142354849114	0.19912643902397	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78642678242421	2.44571438143383
Merged-chr10-94336310-1	5.7036403909455	0.294651631564255	0.653092240341067	0.451163883696395	0.651871437589953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34833579155055	2.84973152037564
Merged-chr3-86103909-1	1.88184900588694	0	1.56328094925502	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142759429-1	7.49318725292509	-1.28280932980131	0.625008466470787	-2.05246712423737	0.0401242869004552	0.317006607640811	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22851196578406	2.84681464190051
Merged-chr4-134082244-1	2.95290559658994	0	1.41752678024494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51250508-1	2.03466691483298	0	1.47835155253942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24036579-1	3.59800914930269	0	1.36096240857094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98894124-2	4.62013219365995	0	1.32172458799725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43920001-1	2.65778848346472	0	1.36413569842908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55985624-1	1.31033660965376	0	1.51707408770109	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103009483-4	12.2249235672633	0.142438843380126	0.54410363612987	0.261786236889121	0.793486250506445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93058099520982	2.97976779392589
Merged-chr16-18396686-2	7.29321601132835	0	1.34499564896357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30216844-1	2.68412341910047	2.4549990097882	1.25260871246769	1.95990893672754	0.050006434893617	0.37066935912446	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.918668513615376
Merged-chr15-78300698-1	2.34882923299037	-2.49066350101922	1.05914765079388	-2.35157345545954	0.018694198150684	0.177892976897422	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77521799995578	0.581381506691384
Merged-chr4-59816190-3	3.69052037834801	0	1.37571973684481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3172996-2	7.77233478972336	0	1.38557522935415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5892888-1	1.27407687354599	0	1.65704209058329	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37787641-2	3.37094959832921	0	1.35660965384749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7420350-1	2.54359658683332	0	1.35439373297377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154901960-1	3.31223720698869	-0.980733431710868	0.959359846122631	-1.02227900789742	0.306648865790712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59640381379	1.56104072393284
Merged-chr19-53553000-2	3.3303258277116	0	1.44567592761596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63871164-1	2.08468205607565	0	1.41376005111447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108895183-1	1.54170152519728	0	1.55289000424018	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94143469-4	8.11777888712527	0	1.29627038574033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80637319-3	6.8868290624474	0	1.3044360778881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97688956-4	6.99102452548905	0	1.30062810780547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41073631-10	31.7269406883612	0.256512094137766	0.355666553723674	0.721215114134843	0.470777174082057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84233966807923	5.0499661250345
Merged-chr6-146127046-4	8.47301253701837	0	1.3183394796257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69182586-8	22.6499361610728	-0.132283512005981	0.37933693296081	-0.348722996660195	0.727297277944078	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34501603480742	4.26602220657245
Merged-chr10-120231901-3	5.08526504402483	0	1.31218956742046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97486080-6	13.1066152989938	-2.4212311359178	0.702071616631402	-3.44869537318012	0.00056330179813573	0.0120606246881821	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58952318095604	1.20539659680455
Merged-chr19-47651026-5	23.0492526444035	-3.53139476505345	0.610725323483669	-5.78229627831681	7.36877793875332e-09	1.37971393462973e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1542340484061	2.12069662938216
Merged-chr3-95631077-4	8.85542679731018	4.59411570639061	0.991559072321995	4.63322441862418	3.60013900335121e-06	0.000224265665693983	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.34310688897156
Merged-chr2-121179019-7	13.9213494978029	-0.382385513170356	0.498867852574181	-0.766506623341691	0.443374912402438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78663891600086	3.42670276088062
Merged-chr16-37994833-8	18.9781339085827	0.2867745295995	0.319080576933611	0.89875269863	0.368784400222662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52580842545337	4.66686506172752
Merged-chr3-10297400-2	4.40069913679695	0	1.3165748997564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79232257-2	5.31113052422619	1.91228187734037	1.0315086978962	1.85386888277389	0.0637579206883702	0.443745349377169	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	1.41959898789419
Merged-chr2-117852118-3	5.79638393851907	2.84758817343561	1.16877527056014	2.43638639964626	0.0148348283012783	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr10-40069464-1	4.51804184782734	0	1.34759849909507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19693187-8	21.3228240430924	-0.828155733590318	0.374047996694404	-2.21403600850433	0.0268263019891913	0.234922477859246	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35742938810087	3.61370144809257
Merged-chr9-35183560-7	18.7910379410789	0.197036184634505	0.385703798336242	0.510848442469151	0.609457185436201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8434213944011	3.96875355455724
Merged-chr15-67788406-6	23.6664976990766	-1.45124583648918	0.478675611313974	-3.03179397944566	0.00243105065731096	0.0377159155395637	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11828406421697	4.34820378793012
Merged-chr1-91097872-1	6.98899038809677	-0.615006045488347	0.566603950767584	-1.08542491568439	0.277733502097111	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9618260385666	2.74881841521221
Merged-chr17-31437195-2	4.79914961401137	0	1.32915934447642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117271720-2	5.07176224619116	0	1.31769941882758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64102748-1	4.90745854890158	0	1.31638761330912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112810529-5	14.6500319326156	-1.52775310287292	0.56792190180476	-2.69007604393839	0.00714357387970946	0.0852610006837432	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94454220872017	2.4635411791775
Merged-chr6-117462257-3	8.49120396668805	0	1.29150567476809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62853465-6	20.9478237532743	-1.09987032519856	0.475769199135484	-2.31177286633335	0.0207902034450091	0.193141403798346	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21057492463185	2.76071477186363
Merged-chr19-38012427-3	14.0549519878636	0.416880955856285	0.632353582459883	0.659252936046634	0.509733359070826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63941741081058	3.44606266490874
Merged-chr1-94147227-3	5.43562907165424	0	1.30652847945671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17777181-3	5.94977098700787	0	1.32392136986013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98968192-2	2.79669873617514	0	1.43728379740381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23423267-2	5.81625707861115	-1.1184262478338	0.806475141788787	-1.38680808605346	0.16550029077727	0.887986041639828	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64648190349245	2.05128027335406
Merged-chr18-69439553-2	5.50172807326318	0.0242997079776262	0.688432355604857	0.0352971614128689	0.971842786786409	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0975379373658	2.1359713465465
Merged-chr11-11812168-4	5.95098996621936	0	1.30507543416003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135699750-2	3.81627066167584	0	1.36776617739689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145161273-2	3.01877452177978	0	1.3278617356504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148075552-4	6.82898507948469	0	1.30106709676545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54993809-2	5.78646227808304	0	1.30852767242029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108179267-6	15.7079780049213	-0.718108485863536	0.402954416042846	-1.78210848987738	0.0747315416037357	0.499836982358006	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63840532725815	3.90093003303133
Merged-chr15-73604754-3	6.60946921091458	0	1.38199247417699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27863182-1	2.51053267977439	0	1.35332138043044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60187135-1	2.05321927311638	0	1.50300876352786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53232603-2	3.7548015109446	0	1.3467230513753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31034933-6	16.2259395070442	-0.106151583206671	0.500703474340623	-0.212004886417978	0.832103222163635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9140287543151	3.52326642192598
Merged-chr18-78014818-4	5.93811798113291	0	1.29392963701728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36704910-2	4.81974988183845	0	1.31834949153826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105963281-4	11.7432374004941	-0.394330293025034	0.484604339081765	-0.813715976568053	0.415807679433466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76809566922033	3.2549666937687
Merged-chr13-101842153-4	5.19850299686731	0	1.34640756129451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33914326-2	4.27253178426105	0	1.31311811290495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183804432-7	18.6741153000721	-0.0933077569459133	0.420885435654279	-0.221693955270426	0.824552136029962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39246413932587	4.33667406152651
Merged-chr15-72549513-4	6.32397821984082	0	1.29376228366895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146416370-4	24.5363958168952	-2.77681569086952	0.444260798756441	-6.25041799466054	4.09355627225328e-10	1.1995404850523e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.41153038652636	3.58158575508978
Merged-chr13-45267541-8	24.8884520007521	1.42694205676987	0.443114238647787	3.22025774013568	0.00128075391433567	0.023036648853889	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98940084494537	4.92394705673504
Merged-chr2-90631000-4	6.0356087109833	0	1.29544811312214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77719075-2	7.94413109315426	2.9699856145402	0.737615594367542	4.02646803730712	5.66209319598787e-05	0.00201193660677011	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71329187873301	4.77929526303416
Merged-chr15-35917556-2	3.53088238999692	0	1.37550696707753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114793579-4	13.5241606573281	0.231589874007313	0.582115704500248	0.397841652813911	0.690746911612966	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43728677570087	2.94407591329079
Merged-chr12-85467144-4	8.12041861852837	0	1.31565735403002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19856282-1	2.73707452533243	0	1.33060983036779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128084046-2	4.07673082912817	0	1.31850195217624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-26537876-4	7.43121060286651	0	1.29373519136417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11819504-2	2.45596520004285	0	1.37405648890562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112985987-1	2.69253205590749	2.41011737460269	1.18151776924235	2.03984860604185	0.0413654069256249	0.323710728594829	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.34805514843284
Merged-chr9-110449065-3	5.73673984463008	0	1.30712462182543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51539806-1	4.21862415957489	0	1.34558010595691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100027990-2	2.34836821412498	0	1.50547311605741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139303461-4	5.24895745048712	0	1.30801639866375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111929501-1	1.93563151361525	0	1.37513820087453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116016500-2	5.46198735943275	-0.790706272302641	1.41731022318792	-0.557892167407163	0.576918020365526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	0
Merged-chr8-115638395-1	3.56669717261879	0	1.35334318573104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64287262-2	2.64764692062815	0	1.50430931178018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92000979-5	10.3087769380096	0.391498334905346	0.534350959939619	0.732661423401551	0.463764957927104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44642507902342	3.22955830519793
Merged-chr8-91051192-6	13.9643904098913	-0.05246261110484	0.578676262390351	-0.0906596909438301	0.927763000646491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65415605524926	3.01730859045106
Merged-chr10-8926466-7	25.5166993616449	1.79520107406673	0.324349721842849	5.53476988932498	3.11637220934576e-08	4.67069858697038e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87139861593823	5.60255461160821
Merged-chr9-45243105-2	4.86062681281169	0	1.32652604098408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82464846-2	4.20960129977166	0	1.33253577596921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115793494-4	7.94042799311806	0	1.29896272486801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37333593-2	5.45833621154634	1.85876666139873	0.954135463114219	1.94811610432324	0.0514010722692938	0.378288900055634	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.719438056733391	1.76901627090616
Merged-chr7-125484824-3	11.9326939045757	1.9882400878157	0.565039433499741	3.51876341709628	0.000433563156157049	0.0098785278947833	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49906616377177	4.49542377306384
Merged-chr6-125595024-3	6.31456759217119	0	1.30941817372104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-63510698-4	4.45617650072324	0	1.32702673909034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88861679-4	8.17535304922807	0	1.2883090606932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74696839-2	6.10533895446748	-1.98325257851018	0.678344891854116	-2.9236640569215	0.00345937875581555	0.0492712650779257	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89862466086953	2.14625477824554
Merged-chr1-191124030-7	19.8100205331363	-1.30959236965532	0.455633808462632	-2.87422123936338	0.00405025135144222	0.0555091497310151	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24412271044499	2.58215829023943
Merged-chr10-128186108-4	5.60198108986852	0.107747569369591	1.31927635952015	0.0816717199486403	0.934907767422103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr3-142598096-4	7.80068436019259	0	1.30931823753058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132079771-2	4.91672046707854	0	1.30420735270642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81812665-2	7.36597299849867	-0.897398648898661	0.634325518114717	-1.414728910112	0.157147994553153	0.856677471600092	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94329033399068	2.92442664098059
Merged-chr16-10461374-3	4.20302449386289	0	1.30632711008211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40713333-3	10.4549991818917	0.62281383044529	0.402589878251925	1.54701810475115	0.121858880009046	0.717709812804967	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42284810762575	5.04758444898918
Merged-chr17-45620025-4	6.27390238066278	0	1.30115576281264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16170595-3	6.06522756784052	0	1.29997877860271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102189665-1	2.20627711758952	0	1.44241395336638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148655155-4	6.51963519703885	0	1.30736524289149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73518109-1	1.42144210429614	0	1.61932228581337	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59459089-3	6.31243387589043	-2.02303855012407	0.818857269691928	-2.47056309445134	0.0134900519471284	0.138669330586291	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37584316871197	0.793480537552656
Merged-chr1-51938968-3	11.7158255547905	-1.04749591610684	0.413932929154655	-2.53059334575304	0.0113869781194896	0.122464363429257	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24995902526488	4.16444625121729
Merged-chr17-47842410-7	14.9026570314559	0.0119964363360189	0.443883698146986	0.0270260799982036	0.978438932795279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42686611399146	3.14399599449285
Merged-chr6-72566203-4	6.2097333763339	0	1.29792447313645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71519234-7	17.2156888501947	-0.0292136516837982	0.43800470824429	-0.0666971179394373	0.946822828755979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00856369324412	3.95541954979818
Merged-chr16-36531795-2	3.88738729526323	0	1.38509741591405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96153276-2	3.91833102874942	0.658349586684571	0.847964426194055	0.776388214349346	0.437519801302758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38793491794631	1.92245040002336
Merged-chr14-13974908-2	4.06521312766851	-3.33121425330669	0.91541978548355	-3.63900180674711	0.000273696879484827	0.00692948325719315	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88134143873587	0.992113827166316
Merged-chr16-94618711-3	5.11748421625905	0	1.30487143083381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102499735-2	9.88624928124418	-1.29641346834747	0.608354371545834	-2.13101693516769	0.0330877470323276	0.276063369672504	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70885239201089	2.78568028115994
Merged-chr10-62311609-4	6.24305221335329	0	1.31113116530978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48523735-4	7.09254015743949	0	1.298699166189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33375661-4	5.67945823246154	0	1.31611289726989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88072021-2	3.73426380711907	0	1.3293367642166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63590137-4	6.86632584263248	0	1.33249412297701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101595411-2	5.23527450237592	0	1.33122034546646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115392540-4	12.5499535403543	0	1.30578745061304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26779066-4	7.58570831341598	0	1.31262435781246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117180680-3	4.01513950086675	0	1.33633662236031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28593621-4	5.58628895829907	0	1.30455971126086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40757326-4	14.9211388146134	0.127970705059776	0.544547022485779	0.235003957005602	0.814205661974986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3079576768578	2.53362026845792
Merged-chr5-23826539-8	24.4269611681132	-0.319812680410199	0.302185264999524	-1.0583331401374	0.28990358929852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.47981280637896	5.14583969951025
Merged-chr12-21393193-4	13.1577488431576	0.850070541615126	0.424427065967034	2.00286600402895	0.0451916729321818	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82668819369853	4.87729725397007
Merged-chr16-33820937-2	5.2474019225826	0	1.3225541713909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184791280-2	7.40213803094655	-0.442867094352856	0.580595244544313	-0.762781125946778	0.445593939047153	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76848633772157	3.26414054591518
Merged-chr15-85012763-1	2.44001714544629	0	1.41091900922553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137898648-2	4.4819289586697	0	1.76414636461076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125243832-1	2.69658436532506	0	1.43895467041033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43868564-2	3.03517977279304	0	1.59586731755002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142272696-4	9.93896519674485	0	1.29779421679421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117061671-2	2.86836994346552	0	1.39976993124776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47258766-1	3.05193429434987	0	1.34880819592382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-40699024-3	6.34700896285857	0	1.32751906580235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51322636-1	2.17820478520262	0	1.48670024394186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125484932-1	3.01117275532464	-1.28671351758966	1.27872911489742	-1.00624401415375	0.31429820442941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.80132158588404	0
Merged-chr19-3622529-1	3.29489720944792	2.13645144622799	1.10626754944435	1.93122490784537	0.0534552450287794	0.389115121048303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	2.30944904015933
Merged-chr12-91665675-1	2.5079531922813	0	1.33788875217703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86437638-4	13.9325470370243	-1.44704471528846	0.405413133641796	-3.56930892270253	0.000357924164698094	0.00852841033467675	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27959144873565	3.90718001450854
Merged-chr2-18952201-2	4.13464166126441	0	1.32942396033194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117428037-1	1.96001397552216	0	1.4933147848259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148980789-1	2.95742684792089	1.47765843049041	1.21468932154787	1.21649083784439	0.22379799915182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90094538361611	1.73054899258335
Merged-chr15-61935704-1	1.6991305228472	0	1.46356024700288	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119359571-1	1.81623701240401	0	1.50220595345264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49397899-2	2.58359330928911	0	1.48123596854233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89333775-1	1.5964749363844	0	1.43418896474417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55020004-1	1.77488882109346	0	1.55862875494271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52874929-1	2.47413982855206	0	1.40465140843946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53166657-1	2.11615491022549	0	1.4389027357162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95465698-1	2.319325349867	0	1.52062790822392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40918341-1	7.42483202378561	-0.577143772146418	0.597886439562971	-0.965306676913906	0.334391228502971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27422474518425	3.32677481415222
Merged-chr9-118486549-1	2.90474054208193	0	1.38401389193204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142858956-4	5.3161499375672	0	1.33941875036939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120256051-4	9.9713446920085	0	1.30473489794818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38065915-2	3.32685961498693	0	1.4717077515241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110660380-4	10.853998861889	-2.63833317871966	0.691818298828713	-3.81362155812661	0.00013694511960673	0.00406764353900973	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15636896925646	1.23021119707292
Merged-chr4-141762798-2	7.14893489807684	-0.669211482274028	0.579580561397864	-1.15464790720377	0.248234639879399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09313517702007	2.90313252923256
Merged-chr6-53713383-4	9.14907661639684	-1.86406338821505	0.580327634745821	-3.21208792517953	0.00131774039012159	0.0234938800392415	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30487063104774	2.11480110409737
Merged-chr13-43554826-9	33.4168651185514	0.00888731575575098	0.299667977976821	0.0296572086739224	0.97634043942792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01940763742336	5.07336360827939
Merged-chr1-183671588-6	15.1897249894323	-0.9247069623843	0.570103216616265	-1.6219992019563	0.104803519008796	0.643562360895221	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1481065183761	1.54311005189624
Merged-chr1-149958092-4	6.95818945546084	0	1.31568989761734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8926762-6	13.5710195654538	-0.401387299776094	0.441189723991079	-0.90978388196596	0.362936496473597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95913590614022	3.30710152728353
Merged-chr17-84935777-4	6.36322855600127	0	1.30725099217464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30717500-4	13.4338736115443	0.533955129530164	0.667572798300183	0.799845546268146	0.423800290578181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99032018681815	1.94985701881947
Merged-chr11-111227474-3	6.47531734298853	0	1.30135734086945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90212976-3	7.3752986856226	3.12751269238192	1.11554097837776	2.80358386917351	0.00505380861332955	0.0657206323674891	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr2-102290230-4	6.28205240860737	0	1.28982831885202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84946179-4	7.38735450551399	0	1.29745730793277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47241537-3	12.5741047953569	0.967769513762423	0.539375000425908	1.7942424342957	0.07277448182145	0.489805468030124	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83050405781264	5.0114150546619
Merged-chr11-120237388-3	6.4311381025415	0	1.31168090895978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3647757-3	10.2847017142248	1.3838474690556	0.573978448271932	2.41097461624548	0.0159099557008258	0.156668469744751	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66578748825451	3.4856628864038
Merged-chr13-41572196-2	3.83008419123306	0	1.35428729592619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76742467-3	8.97365088276637	0.233453051231496	0.584636177658298	0.399313385234846	0.689662305624647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29614614219828	2.86572735051143
Merged-chr9-32855794-2	4.28754861813859	-1.50711567657891	0.813527180690944	-1.85256954205131	0.0639440814057063	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71588257397706	1.98485448024296
Merged-chr3-20509389-4	5.71838687004013	0	1.32314949320479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163698249-3	5.17961952015458	0	1.30658704456442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165927556-5	9.0766177215244	-2.02208180119862	0.672277528330462	-3.00780810898182	0.00263139233496708	0.0401379466668438	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45095796764718	1.31734301959449
Merged-chr7-34305566-3	3.99463660549618	0	1.40009343015448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135018232-3	5.4738955902459	0	1.30794601587147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68951988-3	14.6764762906017	1.5091525945047	0.614139405588375	2.45734532057727	0.0139968071751311	0.142267127339573	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23997139775169	3.74041655994538
Merged-chr10-51435875-3	6.12577524332483	0	1.3086922718238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83185392-5	18.8094534588775	-1.06798132453238	0.441120907465355	-2.42106258501533	0.0154752127231007	0.153427894189613	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.5673422483673	4.41140728038355
Merged-chr10-63377650-4	9.54442221945585	0	1.29515998129893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95758628-1	2.57920483854551	0	1.35909926406738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11411918-4	6.11580645506043	0	1.31735677114025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14239663-4	8.36210740646046	0	1.2950308825482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41402030-2	4.90731218411529	0	1.36164795452978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67966354-6	20.0912445838272	0.770087475758387	0.427823348764566	1.80001273418616	0.0718586275168692	0.485441318486233	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5680661790481	3.86944770730881
Merged-chr12-34433590-3	3.84022733520907	0	1.32449019534645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5221949-1	2.69227569184381	0	1.39915871565965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11765429-4	6.63816168234977	0	1.30845422391714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-59234657-3	9.66006245893255	-0.621390510138519	0.626449753812821	-0.991923943391295	0.321234628210451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7255512369051	2.99529989251982
Merged-chr5-90746366-2	6.62324941004551	-0.82847414640818	0.662837132065518	-1.24989097069216	0.211339378254495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72699520503537	2.42139546294927
Merged-chr12-40538491-2	4.02860548463455	0	1.3175854304545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51742968-4	5.68457183542305	0	1.3278790289895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13073216-4	7.21406665262377	0	1.30805041457562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116586980-4	5.87676730729733	0	1.3215532613911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43512952-5	17.2430294214305	0.715755949180864	0.400326314895341	1.78793130141342	0.0737870920944456	0.495192700010644	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46484730259331	4.86530631835026
Merged-chr5-108248710-2	6.03213857928774	-1.30141909791442	1.04157795767701	-1.24946873954295	0.211493680250077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55017614135554	0.563523181795778
Merged-chr4-59822278-4	8.26492170405764	0	1.29836841213364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125548624-4	6.89091196369805	0	1.31713733003033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47587958-4	17.0134281694501	-0.523825934430829	0.369549084113512	-1.41747323143122	0.156344615280265	0.853764784070242	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9508051957956	4.511047628941
Merged-chr5-99297383-6	12.8104310071619	-2.23728402863544	0.693343044234758	-3.2268067693745	0.00125179965150923	0.0226295246489893	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54827611681611	1.14490468848716
Merged-chr18-82470223-3	5.94631003474885	0	1.33975662797187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60315987-3	5.78328518053219	0	1.31702152321024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118489819-4	7.68226557965323	0	1.29640247498878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71662821-4	6.35710924688457	0	1.29619300771241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116437150-4	6.6280164526157	0	1.30509542146831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118564703-2	4.57364416191476	0	1.33916611949462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36779767-1	2.09737613075356	0	1.39602030950155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95801629-2	4.89748161301707	1.03635908798805	0.915998303900674	1.13139847920551	0.257887411313843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28937769251541	3.50676710473245
Merged-chr10-117124709-2	2.55148692435569	0	1.374554083518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25538360-2	5.25532600181189	0	1.31952643831746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62048950-2	2.17201179298606	0	1.8112765838144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57513871-4	9.50527986663218	0	1.35229572476995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89210955-1	2.36282762667135	0	1.38854057862814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43955620-2	9.27089642639415	0.864563994708364	0.692710876787735	1.24808780066736	0.211998905313084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21418384894446	3.46954145756221
Merged-chr4-120934087-1	4.93272046953089	-1.08089533361996	0.75564986087007	-1.43041822620783	0.152597020236058	0.839784814245029	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58708805973731	1.76628008406346
Merged-chr19-24146237-1	3.90433468941873	-3.21505493760185	1.13854941469807	-2.82381677606364	0.00474555049344756	0.0625333217472927	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70544098468306	0.306240821987646
Merged-chr4-115980862-4	6.52895640666593	0	1.29797440328478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73057036-4	7.45552080486183	0	1.30116063339237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86802939-1	5.85678706566559	1.69674485636493	0.588665018406154	2.8823606012108	0.0039470773906528	0.0545528170832483	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68545684001813	3.44750359419753
Merged-chr9-111122419-2	3.59380612767935	0	1.52440650608485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81536097-7	27.0444335453082	0.20993339366852	0.369582118144636	0.568029088426735	0.570015216450797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20808100494484	4.29479415505059
Merged-chr11-69691184-2	2.78729694498083	0	1.38334671348419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8429984-2	4.32064397196035	0	1.32587418805737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24697798-1	4.29882755414044	0.414297822800824	0.829911384512196	0.499207301565503	0.617633351288636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91414386512014	1.79257770822194
Merged-chr8-125487204-7	26.1269848327192	-2.49402542868968	0.381762066800671	-6.53293149209579	6.44946500892008e-11	2.43238098734348e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.96045213622957	3.00040769014949
Merged-chr11-67975189-3	5.22784117737319	0	1.33955768048735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22889555-2	8.50726604047628	0.424130371542524	0.717276221357248	0.591306889750191	0.554314814073613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60203380785764	2.03280651306513
Merged-chr2-170327008-4	11.1733180171744	0	1.31675935614532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20142719-4	9.58458555784533	-0.466479215341623	0.484205564451622	-0.963390860387832	0.335351411182906	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81946603229455	4.12558586085945
Merged-chr13-59842326-2	6.10695771555484	0	1.34145323547664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148810659-2	4.3726698480437	0	1.32684283135499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102810219-6	25.3735160435564	0.452109346828751	0.517084936398558	0.87434252093601	0.381931749533486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85447866272094	5.62027953253939
Merged-chr4-128957417-4	5.84139528785884	0	1.3003146934789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132946831-10	34.496711473311	-0.373221238941971	0.251423229204011	-1.48443419537473	0.137693768582921	0.780443837437728	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38645874511204	4.95353478782629
Merged-chr7-30654540-2	12.5466476486628	-0.849276981812221	0.439989779404116	-1.9302197950198	0.0535796098610374	0.389890109797255	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96286868582349	4.18272955917648
Merged-chr3-144982845-2	3.91629400698834	0	1.32992048122281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77831498-2	3.97408946256008	0	1.32028159985193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11664739-4	10.1748777948076	0	1.29166316183602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124668679-3	7.58323884669463	0	1.3832944039568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3835105-1	4.01764113102913	0	1.36706224764617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38952655-3	5.65211989849691	0	1.31330301536515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77772951-3	5.18470673662174	0	1.33024208381393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136151043-4	13.3689694350896	-2.82557189623224	0.675587658089351	-4.18239122991577	2.88459032336901e-05	0.00117573123628266	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10337299435539	1.46486482462982
Merged-chr7-101571067-6	15.1887174484083	-1.44535718456316	0.591174718013629	-2.44489004776729	0.0144896308232195	0.145996364076686	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35373969672304	1.41926493179619
Merged-chr9-32940597-4	11.899619086435	0	1.28178562728074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68208030-5	12.9801885183849	-0.800619081221926	0.48590504798711	-1.64768628055736	0.0994170647830421	0.618067502170361	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12700672404165	3.44831032352418
Merged-chr8-26768370-3	5.03289765724369	0	1.30916061155407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102240231-6	14.3183945098561	1.2981004551793	0.475638031946742	2.72917716412688	0.00634925830963833	0.0782710432382492	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36212528837579	4.28743418612999
Merged-chr2-77268732-3	6.33093250408973	0	1.34506356474864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107950816-2	4.08064467137257	0	1.32828162265509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11215416-4	6.04960015801172	0	1.29694677519903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67369821-4	7.77363313045298	0	1.32629130651756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49777611-5	9.27774503164108	0	1.29218913420846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131754961-1	7.37830650283541	-1.66968861206197	0.759999006029749	-2.19696157339003	0.0280231907015005	0.243090856176855	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29540156129103	1.89798359119731
Merged-chr5-114915911-5	10.5550209341949	-0.975421081466084	0.659570931025715	-1.47887215094392	0.139174487714376	0.786245013761875	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5481371695398	2.46659948626382
Merged-chr10-89406974-3	10.7437343127432	-0.346078580027327	0.583714709747446	-0.592889941350053	0.553254810065546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82527955931806	3.4356777062723
Merged-chr7-67551469-4	6.24829468399834	0	1.29558382988489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96593784-3	4.75465012896098	0	1.3245307324549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114785565-3	8.56725760390397	0.257791693412787	1.2941438027826	0.199198646130744	0.842107358432138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.306240821987646
Merged-chr3-84674897-2	4.63557675078088	0	1.32647469969035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115480269-2	9.09990455114086	-0.819605036227944	0.71847843736577	-1.14075105612486	0.253973533387463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50512015115763	1.65215194967867
Merged-chr18-62191690-7	16.3851377973981	0.670230679603494	0.485854505032727	1.37948845314987	0.167744203952189	0.897079364224545	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23107351243168	3.1726234347789
Merged-chr7-102204691-6	14.4943291761629	-0.175952189295759	0.431106364108161	-0.408141015639506	0.683170149327492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76996905869345	3.48141459347113
Merged-chr3-146345387-7	18.8675550555026	0.212206727928959	0.431615080672657	0.491657352653763	0.622961591710596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21408716926592	4.40302381505339
Merged-chr12-32893418-5	15.212438478889	-0.0612499295472853	0.471491959994042	-0.129906625657115	0.896640302196596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5797417474817	3.49327373526118
Merged-chr15-28395871-2	4.54166560712911	0	1.34396972272959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146772183-8	17.0696685582458	0.515757518390274	0.359340482608575	1.4352892127439	0.151204700420003	0.833807793556586	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8255518974011	4.17196016076445
Merged-chr11-73109301-3	5.93891415730709	-0.844915085041724	0.582031904824576	-1.45166455315947	0.146594899974966	0.815406054968008	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80106568716231	2.53127161644371
Merged-chrX-7733912-4	5.22378209339837	0	1.30486826562739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79558034-3	6.74016225027174	0	1.31359802865707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75564229-10	34.2266072421064	0.32389467492543	0.327343443468399	0.98946437262825	0.322435992757717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48781120939392	4.77542667881787
Merged-chr10-98831671-4	7.24960846748066	0	1.29696840288611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40644927-4	10.7140106467475	0.421114926181233	0.970539110710127	0.433897945517219	0.664362551729347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	1.07938469868934
Merged-chr17-40709003-6	18.1515677827948	0.906058276549856	0.396436888917536	2.28550445702425	0.0222832653842027	0.203970436421249	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44705983297671	4.36494468520548
Merged-chr12-25164972-6	17.1590220036509	-0.224200107817142	0.488542562745556	-0.458916223301327	0.646294328159718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78015159000096	3.9005419201332
Merged-chr19-22073742-1	4.26143380098045	-3.89966192567481	1.20513653023401	-3.23586732942	0.00121273735995075	0.0220315639486633	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45912067889602	0
Merged-chr2-118963133-1	3.40694730349984	-0.213881912599319	1.09992717754954	-0.19445097545077	0.845822778911912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89553893083908	1.53823966306787
Merged-chr1-60627234-1	3.24657871520395	2.2659167044732	1.38440358730118	1.63674576204363	0.10168360281608	0.629105918350652	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr6-38500251-1	2.64917853951836	0	1.36431516434385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118125613-1	6.61360049758438	-0.567608571949843	0.615279406228163	-0.922521648220674	0.356256543696492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12970266012803	2.6922775377882
Merged-chr10-98805237-3	5.13743525112267	0	1.33663657706668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3799809-3	6.45418787433383	0	1.31606828896013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59522949-1	1.43382124659516	0	1.67519869864252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120170478-3	5.58294899502181	0	1.36276963001803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59350708-2	4.34630336505448	0	1.33701839627458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97590892-3	6.54737851584067	0	1.30980271699484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41377076-1	2.70457953054008	0	1.36368396750772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22054528-1	2.46431066876338	-1.06187253701451	1.3826847094822	-0.767978794972112	0.442499782957859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59725761491471	0.905469781553611
Merged-chr3-41452209-1	1.42760966587491	0	1.60399817013172	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53567251-2	2.93510356271581	0	1.42812005419237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94078503-2	5.05857732054945	0	1.35223794760366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116999816-4	8.51017928893886	0	1.31382501463429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32069119-1	1.46152641029387	0	1.68817238263306	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48680818-1	3.42856523493227	0	1.30925195581332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102801708-6	12.7561931526525	0.80127795621438	0.520582923122505	1.53919370118451	0.123757014901837	0.725033700535723	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54468236397107	3.59890913171288
Merged-chr1-89302706-1	3.05469659769615	0	1.3405269661249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59820464-1	6.32795681568152	-1.64871087384999	0.844600978477923	-1.95205891996617	0.0509312097275243	0.375977274158925	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08678064630874	1.64538595732494
Merged-chr14-25707838-2	3.74090990696141	0	1.3994823739321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127603919-7	19.1535680615268	-0.424411923455373	0.395807853602889	-1.07226756516353	0.283599870676797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02820645981705	3.56422214750977
Merged-chr6-54082758-11	69.4274779162346	0.875039642039741	0.251903548762632	3.47370906975308	0.000513317282096966	0.0111997432774318	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58903251301954	5.45506420461063
Merged-chr8-105331731-3	4.3318929362474	0	1.32794095410554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114778357-6	28.5354331029206	-1.4387176312351	0.389850194330254	-3.6904371272836	0.00022386901785649	0.00595156421515467	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.70005897547621	3.27042561247166
Merged-chr8-117294631-2	5.5282469644882	0	1.2979948255484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77526454-5	15.0918466805371	-0.722393146893992	0.451107235996559	-1.60137787481534	0.109293250139055	0.663496536936705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51983144661211	3.44520488778582
Merged-chr11-93941099-3	4.26183503780006	0	1.32895525222962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64089428-3	4.82181207510585	0	1.33609261289365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44919087-3	8.94068183762553	1.04815079733193	0.762055828251782	1.37542520964175	0.168999657816148	0.902242781017482	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57500719330485	2.1358769354856
Merged-chr4-136889232-2	7.76533450187503	0.776978148453316	0.695281182704295	1.11750205209245	0.263779722660936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68466056884961	2.46092753114612
Merged-chr12-34432046-4	6.52844151723085	0	1.30844775105204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12010111-2	4.67892477552762	0	1.34267554965803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60609619-3	4.69914943391122	-1.24410208763446	1.2625055317347	-0.985423078443902	0.324416298123895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	0
Merged-chr10-118101287-4	5.35414637681282	0	1.30353081414844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68509327-3	3.94961699804435	0	1.34085985131504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89236334-4	8.38688460005205	0	1.30272470834065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64100654-4	4.43275969317724	0	1.30034962850149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50134492-4	30.5579358219749	-1.30867699906933	0.412210916314409	-3.17477521160831	0.00149952616450806	0.0259515943740353	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.94728073074375	3.74939533372789
Merged-chr1-144406824-4	7.08813845325562	0	1.29756572647973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25216954-4	9.98964781086726	0	1.29103695643583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121832808-1	2.89716628798045	0	1.34516807491147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-3840081-2	3.33887270443914	0	1.35764767771818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179488178-2	4.47998974838861	0	1.31929376508884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149143771-5	13.839823515526	0.121374331553297	0.44415017774168	0.273273180189718	0.784643230078464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33447139413459	4.41114084420901
Merged-chr5-32139744-9	25.1618139090702	0.771345216513874	0.413962999978875	1.86331922551831	0.0624173668221538	0.436460701162169	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62088392248144	4.34159868685398
Merged-chr4-139230932-8	26.6160637213719	-0.590950448943806	0.350767211575707	-1.68473685521846	0.0920393524987267	0.582226866251868	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77388618741356	4.20358772142727
Merged-chr1-192763128-4	10.2994154621604	-1.89653889128723	0.803809600763871	-2.35943796825134	0.018302640540549	0.175007952701597	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75127002882616	1.29281866668399
Merged-chr18-36771474-5	22.4509338996607	-0.907417751329248	0.392942303390723	-2.30929004970726	0.0209274914414923	0.194140808593946	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27735352044969	3.52266155503661
Merged-chr1-77281887-4	10.743516085382	-1.94564125472589	0.718538811650573	-2.70777475507065	0.00677359770624995	0.082059235393513	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78577866842959	2.54005559410044
Merged-chr5-53415642-1	3.13416815946161	0	1.39022731627797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55700633-3	10.8555006207749	-1.66747860546214	0.786608162098191	-2.11983384588119	0.0340200599080488	0.281496061498135	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63118882295069	1.62635771927786
Merged-chr9-40238492-1	4.66458859446739	0	1.35749099191265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101830753-4	6.22423356188762	-0.420193198363204	1.30664753281829	-0.321581136312172	0.747770036368262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	0
Merged-chr4-144930525-1	3.41275330099319	0	1.3416060296007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29624004-3	4.76560333116588	0	1.30798681934168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50816723-3	3.93385957534074	0	1.31389752517878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12467702-3	8.22815438110067	0.612018703071397	0.802837267626944	0.762319747413351	0.445869190727172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33780201726583	2.40895879949083
Merged-chr7-79878008-3	4.62871906305463	0	1.30628689632921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68171672-2	8.31176725933571	-4.9680754494314	1.0325847572364	-4.8113003940983	1.49951443626762e-06	0.000111784594751941	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90540546468008	0.61242769162773
Merged-chr2-128226833-2	5.14656019037626	-3.26832803314463	1.13559438607479	-2.87807695531297	0.00400107522231161	0.0549851233390483	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43882732042277	0.61242769162773
Merged-chr6-21955534-4	9.76716212510721	0	1.30520075943272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63965572-2	4.75904458775615	0	1.31498907305167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51854168-4	8.62718215834755	-0.847318206942202	0.620480535939243	-1.36558386260995	0.172069614478617	0.9146718480208	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61313314346467	2.44127359165182
Merged-chr2-158121754-4	9.2182506166788	0	1.29725521533686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60797175-4	12.5577615901759	0.49983875709436	0.552451290327372	0.904765299395293	0.36558973878992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60677808367131	3.1819016518161
Merged-chr4-97910571-2	4.75906610914807	0	1.30624740832914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45033390-2	5.88336661504085	-3.73769157951989	1.16270259794687	-3.21465831943612	0.00130599873980773	0.0233580938583316	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67032924678884	0.918668513615376
Merged-chr3-83817818-2	4.2899090359584	0	1.33395092356108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90242047-4	6.07906640705323	0	1.29957563737531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146479345-1	8.0097696032552	0.814955051685463	0.575637754330682	1.41574287918805	0.156850799086779	0.855556954684866	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55084934625241	3.06838422124566
Merged-chr17-26505463-5	12.918786721095	2.70828771384283	0.648128505629445	4.17862768003486	2.93273337466703e-05	0.00118994008176719	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40527858924302	3.1582959608892
Merged-chr14-52004355-9	21.5905827115452	0.641357163040707	0.456712904604168	1.40428955822163	0.160232642361688	0.868854223530565	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28443246747361	3.12500985376209
Merged-chr19-24987543-4	12.6484396955877	1.33590069268727	0.470289008347086	2.84059518503851	0.00450294326183728	0.0600263831880904	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58662418307327	3.96381484334041
Merged-chr9-115805466-2	4.17084984387669	0	1.32516460894199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46473931-5	19.9482820230827	0	1.2975614715228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97222232-3	8.93539291802429	-2.66400694023302	0.707650726410544	-3.76457882513003	0.000166830036654197	0.0047460494450175	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4330026451113	1.85144754364776
Merged-chr7-30336606-8	25.2147606743031	1.3474151570875	0.390952005660177	3.44649762011631	0.000567903567247828	0.0121314895408227	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31623786920482	5.55239670564514
Merged-chr3-79789110-2	4.21719280914444	0	1.3365702535894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104750075-1	3.61989107121519	0	1.39142811793538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191950489-5	13.6316523070337	0.632136538300312	0.405256842398851	1.55984174026152	0.118797284891682	0.705656520182876	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57538849887565	4.27927587552024
Merged-chr2-27416734-2	3.24686246853271	0	1.36501061491833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112004352-4	6.86291288701802	0	1.29911287381763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88284397-2	4.15493332299297	0	1.3682517426632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115036519-1	1.92202195439206	0	1.38566350120549	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9530621-1	2.41600443206463	0	1.39793693667802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9834369-2	3.71115363482748	0	1.97330991736179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21854647-3	10.2832584709236	0.743458791979943	0.77162334652817	0.963499608099015	0.335296860735675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24865102756261	2.97064387445282
Merged-chr15-100403482-7	16.573588535294	0.0950875604415334	0.38340068285557	0.248010931366426	0.804125948981205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96903800899369	3.91086887157224
Merged-chr1-156860008-6	21.1009054769135	-0.139936429373847	0.386641399447064	-0.361928209379465	0.717405678939287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.34120785693197	5.14483791945944
Merged-chr1-157019510-3	7.76645748661885	-1.41121000757764	0.664267390697814	-2.12446076284907	0.0336316336944297	0.279320378164235	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47535404992306	1.96027510505613
Merged-chr8-84469905-1	5.70724863360457	-1.5165502821049	0.626805424303625	-2.4194913178835	0.0155422317491104	0.153928868729519	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38566801613065	3.06103001569182
Merged-chr4-101328820-4	6.56614395219784	0	1.30964279350399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3665551-3	6.23816269773209	0	1.29544871510852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73078795-7	11.4116333293593	0	1.29354128181895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64364449-8	21.1178933452125	-0.249770167573325	0.437940524384525	-0.570328968583914	0.568454596524276	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68460407708671	4.60410097068362
Merged-chr8-72152102-3	16.5214510712456	-2.1744633711879	0.443786664218425	-4.89979430773896	9.5937040967889e-07	7.75878945431643e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05809651649835	1.92027594280124
Merged-chr13-37658736-4	7.67189267962215	2.46698753581888	0.951777127103107	2.59198027097749	0.00954252437779677	0.107086690364332	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.52696130946871
Merged-chr11-69266478-4	6.02144870574075	0	1.29470480881823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56115330-4	8.49843498127107	0	1.30292633061708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80382785-1	6.63588038118225	-1.21654607332764	0.931505238469312	-1.30600024893765	0.191552472915998	0.987393539099852	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46665762711882	3.0556637270067
Merged-chr6-31128036-3	4.82993084802943	0	1.31458795841984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38650753-3	4.19522358050324	0	1.3280417120051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111461531-1	3.14648393083901	0	1.34887991556896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60435139-1	4.85531274429311	-0.451546971010124	0.856037465519323	-0.527485056668856	0.597856790919918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76608671458906	1.20275690226768
Merged-chr4-155710830-1	6.97810029167777	1.29955021258975	0.689643805988394	1.88437886530025	0.0595137465353212	0.421113728326703	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05378098411896	3.35455731442812
Merged-chr11-30209768-1	2.80982069903637	-1.16654582847795	1.31897801082486	-0.88443159696682	0.376463272567612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.982495312254049	0.382164212378408
Merged-chr7-80191635-3	6.55015323006305	0	1.30951544401338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68236489-1	3.34131298891838	-1.740309491306	1.14457668724385	-1.52048308400959	0.128389607054569	0.743640069366056	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93432171719113	1.41959898789419
Merged-chr10-121458735-15	46.8765104381646	-0.0758615907043087	0.310754901756901	-0.244120334950192	0.80713762389324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2284401374269	5.35645521955935
Merged-chr5-21213118-4	8.49037485297534	0	1.30291341465871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124775876-5	20.0334441313082	-1.07262636566491	0.359719678211678	-2.98183955628283	0.00286522113530481	0.0429231408316433	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7036362051499	4.67603199701397
Merged-chr7-96730553-2	4.45477660757074	0	1.34268369286699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117982724-4	10.6645719818084	0.534065866045526	0.50810958668695	1.05108401816982	0.293220003547013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56477819532761	3.49150090948888
Merged-chr19-45650079-3	8.4680743890496	0	1.35160318497069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46848360-7	20.0825722026235	-0.520969269981181	0.390453383151939	-1.33426752708774	0.182116195888259	0.952273740618883	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41525359550101	3.7484255461783
Merged-chr14-54368071-2	8.32567761347985	-3.04889659715538	1.02559805328724	-2.97279873668158	0.00295097883668133	0.0438958941638466	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64178571502212	0.420961122473315
Merged-chr9-45095315-2	4.46144980715786	0	1.33333083049907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92318770-6	13.4183719240373	-0.18821770047947	0.567950729400163	-0.331397937772268	0.740343922395037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39775662117884	3.51742061429114
Merged-chr9-14725224-3	7.4848511131267	0	1.33319932751758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59772947-3	13.1779229393196	-1.53953315448915	0.665246443355051	-2.31422981643433	0.0206551192565539	0.19207761817828	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34835890748079	1.93871841517079
Merged-chr4-148655200-6	17.6501403794915	0.796536879867487	0.414410065116991	1.92209829566427	0.0545933904988517	0.394980037149907	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30824076769459	3.88935106994302
Merged-chr8-120725465-3	9.75589492741695	0	1.32337696963425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126658575-4	4.74862795293068	0	1.32803407191607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82846272-5	14.3884323245542	-0.164067819834732	0.501893474909615	-0.326897694504355	0.743745264897493	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66953535268421	4.52739244615966
Merged-chr1-120019592-5	16.620862321815	-1.64763902209402	0.545735065706195	-3.01911884654496	0.00253511061885229	0.0389204244311478	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88702614724878	2.38658767833973
Merged-chr15-35147032-3	6.71261572350251	0	1.32823655814729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105710172-2	6.97326219553075	0.14407373589222	0.764899645174608	0.188356390019415	0.850597283485381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72224394967644	1.51144536133504
Merged-chr17-27051769-4	6.94207974267833	0	1.30037704878676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41522926-4	7.67033370219188	0	1.33300278005355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181256407-4	7.00740450871975	0	1.29381191625415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88831686-3	4.95524943251135	0	1.34546734892154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91359561-7	22.9059031447935	1.21612275235705	0.489932881779837	2.48222317297647	0.0130565473329106	0.135448982698266	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98630937555618	4.23597034622883
Merged-chrX-94616751-1	1.42635481870094	0	1.62727598878465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10380208-3	5.4412105683008	-2.54053351305975	1.03276225216843	-2.45994032772359	0.0138960118129981	0.141595008253886	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23409200918762	0.683637474991079
Merged-chr3-109264711-1	4.42941437077468	-0.934549369175746	1.07130428220831	-0.872347273035569	0.38301895570129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32939017257802	0.683637474991079
Merged-chr3-41260240-1	1.2824818520064	-1.16227997052373	1.53837274127945	-0.755525588393529	0.44993368489475	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.719438056733391	0
Merged-chr6-94532313-1	4.94399506336606	-0.437555428871908	0.864195857623253	-0.506315119439812	0.612635450688251	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9906774095635	1.35032549026822
Merged-chr5-134531851-4	6.06721442093932	0	1.29324446882872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-105430590-1	3.1972300921116	-2.64154010422326	1.27152819736405	-2.07745302833183	0.0377597662421995	0.302996265118684	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57260355940769	0.581381506691384
Merged-chr3-8770908-1	1.06622583898194	0	1.49294304176145	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52031742-2	3.82813975413877	0	1.34485256444678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70586772-1	2.48600588845023	0.0396571031780164	0.971244796983168	0.0408312129971737	0.967430455727375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53255487146285	1.31734301959449
Merged-chr12-33155982-2	4.93745672067463	0.860186650805937	1.22502277404034	0.702180130063126	0.48256683551311	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.73596151290311
Merged-chrX-164590384-1	1.86491023938293	0	1.3895197006957	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86827157-2	4.79886093722699	0	1.33390866722042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44231321-6	17.1544587314054	-0.565249517330477	0.464260742332051	-1.21752598440942	0.223404156197457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76794373259821	3.41357979390182
Merged-chr10-41868132-4	6.36791072649217	0	1.31555066497075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112653367-4	5.94927325508113	0	1.30163084359899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145026786-1	2.85153551575048	0	1.37080373618036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103477660-1	3.19968725738236	0	1.33245804603033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13370900-1	2.1142190643528	0	1.48521556440162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52423308-2	3.85939231817336	0	1.32160558501885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77464299-1	3.34405260032913	0	1.33275798307087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74896525-1	1.25308855908806	0	1.48712602449577	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50971237-5	17.4086938276332	-0.700586385318604	0.352422097763283	-1.98791843577635	0.0468207114533548	0.353623001691045	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.1929628159349	4.51723679180174
Merged-chr11-116429649-1	3.09704426562238	0	1.34508990549283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-179228895-1	3.00844385225784	1.97423958517222	1.20944045925938	1.63235781477095	0.102604130448462	0.633601352134302	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31033758192361	3.06002501957666
Merged-chr4-137815713-1	5.73530882347084	1.81308638724968	0.725509481682191	2.49905264235252	0.0124525811452157	0.130927168166668	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58250949391001	3.59080326047691
Merged-chr15-63932866-1	2.75118212654194	0	1.35925019008412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-35347588-1	3.44731149425355	0	1.3454419993622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5856389-2	5.9111360840273	0	1.35804521800814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171046678-2	5.71153186116289	-0.126732509271957	0.82890929781683	-0.152890683704168	0.878484482859713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36882988796915	2.47044523122567
Merged-chr18-67201257-1	5.30450627446343	-1.97338639810907	0.70695737211999	-2.79137961627215	0.0052483877059321	0.0676718908902602	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72880513817975	1.41926493179619
Merged-chr11-32911971-4	12.3234152595121	0.985122745144313	0.535793171006496	1.83862504871748	0.0659703543981377	0.454784131079303	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20123716251636	4.06865448900884
Merged-chr1-156450308-4	12.9006039395646	-0.382777090691155	0.463040156556784	-0.826660680009972	0.408429413673219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95300315475041	4.60885640487422
Merged-chr4-35950149-1	3.26837247315926	0	1.39489649706075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116153121-2	4.42628831455928	1.45763754103714	1.31246542308594	1.11061024191393	0.266736152341178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.73596151290311
Merged-chr15-55552241-1	2.69460382021295	0	1.34904155765255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12270120-4	9.16772941926457	0	1.29350274296876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133853669-4	10.4151759949463	-0.748095683541743	0.522387473607962	-1.43207048663492	0.152123649845914	0.837744144853454	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55829508820984	3.89324804327845
Merged-chr17-23925370-5	18.507892938407	0.0982348870885268	0.394524591350113	0.248995599367722	0.803364185433383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72472145595994	4.70822911788533
Merged-chr8-83106209-5	23.8196055590243	-0.549861378772703	0.463049909752077	-1.18747756384858	0.235039301277536	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.85643876409986	4.90391165337413
Merged-chr17-17896203-6	15.4861734852102	-0.0418513082617014	0.450085986071847	-0.0929851396328981	0.925915366924989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45557793701374	3.23551524837258
Merged-chr2-50631955-2	3.60399451106211	0	1.3468728009082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40807544-13	69.0202580198445	1.80722142347151	0.233062496085913	7.75423525372922	8.88774323905723e-15	1.20995514520715e-11	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47804991939145	6.35192217119383
Merged-chr3-126652557-3	6.27708172098344	-0.636905992074945	0.962812312669326	-0.661505865363489	0.508287954387939	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50923208090937	0.733321818366247
Merged-chr11-117878445-3	6.1512650764422	0	1.32697605497862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8928878-4	10.6355892721276	0	1.29877683761379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25148197-5	14.3064156160071	0.0678656061141494	0.60699217607371	0.111806393540579	0.910976918000756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16683448466177	2.10444260405044
Merged-chr8-85515943-2	16.2519435231068	-0.866190326215054	0.454267046892932	-1.90678661844299	0.0565482248810508	0.40596318125272	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44940791341506	3.4833453446307
Merged-chr8-106737083-2	3.46384965216067	0	1.34797475241735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34430841-1	2.58735827087878	0	1.5015099567373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24620569-3	6.22917187712617	0	1.29478133212975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29773540-3	4.8101640255192	0	1.31508675091737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47194822-4	6.15813623819957	0	1.29988391290697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99171366-3	5.50232746225215	0	1.30771489097596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83295102-3	6.1472534253361	0	1.34233613250093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107205338-3	4.41979619988667	0	1.32594288544573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6442509-3	5.37525321907987	0	1.31966182226712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116643443-4	5.29002401838772	0	1.30435702877054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68053081-2	4.34480750896458	0	1.34626743893509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59239574-2	5.53488345918073	0	1.30628439027218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84381356-2	3.55743849887666	0	1.36408713927342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177257913-2	6.32517847379621	0	1.29428091873246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60681034-6	12.1296924128888	1.45329573673861	0.447254377445762	3.24937174463954	0.00115660220986702	0.0212518181475922	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64780918648472	4.47888438440992
Merged-chr11-115182501-8	20.9692861608858	0.595780211549295	0.315011508612241	1.89129665190316	0.0585847553961263	0.416796889070797	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42442699685031	5.01648650390182
Merged-chr16-23311878-3	4.76549562649538	0	1.3096264718086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36532978-9	32.8529413333844	1.11038563146147	0.385151597254147	2.88298332235337	0.00393928296545291	0.0544911906563263	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35142540598966	5.69035425864417
Merged-chr5-21043099-2	4.7712098302166	0	1.31119761792125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-117438953-6	16.0727629668663	-0.128028062434096	0.3396473815311	-0.376944058443663	0.706215178382407	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59978416185986	4.38375013718256
Merged-chr1-161735660-1	8.95790864849101	0.546592161277511	0.540961184382339	1.01040920690382	0.312299278630412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61763845510314	3.87571368613932
Merged-chr15-75090038-1	3.2798923979802	0	1.32947179186406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74639374-1	3.25951504664184	-1.23884547295477	1.03566959680886	-1.19617827613356	0.231626996426801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.196089318335	1.81518459389541
Merged-chr5-32721106-1	2.1281700398288	0	1.56063962377651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-99932103-3	3.86288740962142	0	1.33094887423194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-80958793-4	9.388893916723	0.298445463416974	0.534229231612011	0.558646823792155	0.576402777309593	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84343849901586	3.27327435470401
Merged-chr11-61659203-1	2.43625029460461	0	1.42748892923131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101132835-3	4.07160983124036	0	1.32860439736847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77520893-2	5.7911722477257	1.71340465858186	0.917829560429652	1.86680047413137	0.0619294562757823	0.433838148563172	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.828298655478171	2.11480110409737
Merged-chr1-186855637-4	17.6790731850824	1.80632229066521	0.995953615688177	1.81366106032668	0.0697299235575518	0.474050310527651	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.26501898168246
Merged-chr10-87841743-4	9.1574921559703	0	1.29545408733542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14242567-3	7.40227279366165	0	1.30986070002789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87207505-2	12.1614458214239	-2.00400341582019	0.721651001575675	-2.77697032422124	0.00548681883025472	0.0699730022017613	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06010504307207	1.90896656829731
Merged-chr6-38911346-2	4.49836826473521	0	1.31921312546233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153208342-3	5.04225327789442	0	1.32863026898467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56681387-3	6.38265536386532	0	1.31206073264282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67061666-3	5.11132820663201	0	1.31195461232294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105139389-3	6.26182882734069	2.1585409187062	0.791450998913874	2.72732098597186	0.00638508929249426	0.078561484637042	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850239143718389	2.49359679229482
Merged-chr1-136606001-4	6.89130892522601	0	1.31127294635298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120792907-4	7.91846684433685	0	1.29566395921238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43965786-6	18.1102559785726	1.81613917106623	0.555418094159042	3.26985957095266	0.00107600887038913	0.0200829095631615	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5891364485472	3.7263309320867
Merged-chr2-117195451-7	14.9211330319101	0	1.29189900715364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73561810-2	4.69875450433199	0	1.31680909016203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38974288-2	1.80235701979421	0	1.67037458366112	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84675864-1	2.44117355443725	0	1.38132005787967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-42057140-2	3.09848792507966	0	1.40962091268618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-13122304-2	3.3702277041614	0	1.41099139520633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37434244-4	8.14751817537	0	1.28909367815347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144498551-1	3.67043850128846	0	1.41113962582341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12745508-2	3.60524793438183	0	1.3912662491619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170608802-1	2.91708733208277	0	1.35346150697804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86600190-4	5.89917249493525	0	1.34136832810161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8496930-15	48.3102621964042	1.65633485148838	0.359103938160384	4.61241071310286	3.98025536882087e-06	0.000242624782957993	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52406000948629	5.40178291198923
Merged-chr14-22085575-4	8.64305907414368	0	1.30521898683602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156009162-3	8.46992398109902	0.029856592086829	0.579012486404788	0.0515646774255508	0.958875565209085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44998977827804	2.37705875126183
Merged-chr10-54060065-4	7.29416963140568	0	1.30967450819558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91509559-3	6.26189815404883	0	1.32194419328502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19867789-2	4.27091422632754	0	1.34143316789062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64223614-3	5.68909859120009	-2.90986220615941	1.10227752154242	-2.63986350922555	0.00829394230471961	0.0957554688770685	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77285626154828	0
Merged-chr13-95951233-3	5.0758944236059	0	1.3417560541724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50880219-2	5.44330163987029	0	1.31099628179502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136149729-4	9.53274283011838	0	1.33480653388765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29991223-4	10.9060520751128	-1.51476933690962	0.878189357906324	-1.72487781054528	0.0845494952278706	0.546810304350795	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93105037546463	0.581381506691384
Merged-chr11-46820116-5	22.8529217879245	2.3779999416626	0.567370161856786	4.19126718592376	2.77400747354967e-05	0.00113934816069501	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23071786272727	4.36572739539461
Merged-chr7-34957987-2	5.76064738469183	2.5753155038894	0.952610985339552	2.70342830759132	0.0068628250840223	0.0829368725813122	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	2.42194161705889
Merged-chr16-33956339-1	4.00890538149205	0	1.32076620737341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49859678-3	5.84703180739133	0	1.31190960587635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117242928-3	5.87721770714185	0	1.32851692334676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59194788-1	4.15409008925148	0	1.32140437793833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14065005-4	6.04852542330016	0	1.31555604838528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122558521-3	9.84893212331184	-2.21367130876559	0.621863085779012	-3.55974065576269	0.000371221214470321	0.00874786205581595	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91618576356842	1.82306449654395
Merged-chr7-101546838-8	20.6830774221662	0.209363531984141	0.414163170798508	0.505509776691364	0.613200833410291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52196965614668	4.68973246428554
Merged-chr4-3529903-3	4.91125801042373	0	1.31089714795923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64297303-5	10.4670434852705	0.90402309711271	0.803080506163531	1.12569423634923	0.260294964210788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15744861721238	1.35032549026822
Merged-chr2-150672175-2	5.432555271569	0	1.31031415018572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56668978-4	8.01413095151555	0	1.2959814626459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11071332-2	4.70904864259769	0	1.34338376902153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-74935456-3	5.36603629056442	0	1.3390678303161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9656696-4	9.03869745716093	0	1.2953438295009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191965254-5	10.142108361937	-1.61954520336708	0.631879990600881	-2.56305821905673	0.0103754648906517	0.114121381710911	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47936171106423	1.76628008406346
Merged-chr17-69396319-4	8.16330214325253	0	1.29369384977475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94417868-4	7.0365871565816	0	1.29826844406344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170101372-2	7.38368639166413	1.81318690685465	0.80515785662409	2.25196449607668	0.0243245157463485	0.218189403700877	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02654965983586	2.09157224416565
Merged-chr7-102153848-2	5.09787670740329	0	1.34612161183758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57841930-2	5.2834835374354	-2.70288591059265	0.709438991845751	-3.80989195922335	0.000139027533339413	0.00410709457215067	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34608790341537	1.69686753743604
Merged-chr11-83058078-3	4.83616856388218	0	1.30192641989577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117677230-3	5.79166776354202	0	1.30557294762918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38144839-3	5.84618125385469	0	1.30728193364508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83581102-2	3.25017480610951	0	1.40827362181189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110683826-4	8.21530248292772	0.394949180856025	0.974692360327738	0.405203936063708	0.685327611999131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13105957285192	1.29684500016202
Merged-chr15-97059856-4	5.53808027152038	0	1.33404816082679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126513396-5	15.5234304904742	-0.957448613017153	0.40958990255789	-2.33757865376535	0.0194091163569909	0.183180851639918	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28533215129993	4.26371880735186
Merged-chr4-141473675-2	10.4451278026177	-1.93106186511849	0.592608045390724	-3.25858192466031	0.00111970541852053	0.0207099547915772	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19295536489332	2.03169262342392
Merged-chr1-171451180-5	12.5719288841087	0.114018393879322	0.409691313859603	0.278303176128344	0.780779638195543	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69383877303246	3.15780647765762
Merged-chr14-30255982-3	11.273027766416	0	1.32439084983263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46459488-2	2.86358328786512	0	1.36543754281557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61241525-2	2.83050950223851	0	1.3552187460842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121215540-1	4.73445836242621	-0.202544758275411	1.01401147315123	-0.199746022247624	0.84167921845356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44907447716444	1.10669213789164
Merged-chr8-56614465-1	1.9581136902276	0	1.37789338242609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-40953128-2	3.11974676937068	0	1.34635454521875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36262353-1	2.66323314427322	0	1.35341376407399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48707644-1	3.05900423253392	-0.166789520611653	1.35048037468957	-0.123503846288764	0.901708128712597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.306240821987646
Merged-chr2-165403479-1	2.62489830740546	-1.04077897894833	1.23472604300187	-0.842922998868621	0.399271509918893	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13464271080539	0.683637474991079
Merged-chr3-149478653-2	2.50216536838517	0	1.47392815105018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83106688-2	6.84393782832176	-0.845193141438327	0.778331422579622	-1.0859039182012	0.277521503239155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18056169700596	1.65175977651716
Merged-chr16-20014270-1	2.52158192489743	0	1.36365713293611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167912108-1	1.94300430242991	0	1.49469280038063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129928634-2	3.30881484757844	0	1.34231490628275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119099882-2	2.52598242141965	0	1.46903025186101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89024852-2	9.63702933428242	1.26262630138567	0.559894480188866	2.2551147511934	0.0241261269676772	0.216886214449007	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20111152127615	3.83772357519285
Merged-chr15-37656925-1	1.65684564309504	0	1.47262731807699	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108546247-1	2.4217929362736	0	1.59811045717115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100480678-2	2.72569932657635	0	1.36567194645966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118180388-2	2.89126942777949	0	1.37083458953918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23092545-1	1.86623230088806	0	1.5183472622243	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32833134-1	4.63145628108132	0.939939316818252	0.668618666448539	1.40579281432699	0.159785656420398	0.867222051864398	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97766464868304	2.50794861036089
Merged-chr7-84227957-1	1.87958105517396	0	1.53774627250724	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86952469-2	2.84879161800827	0	1.34228966111843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6351999-2	7.16528942825629	-1.3789576908067	0.713049304198213	-1.93388827769388	0.053126865702131	0.387143138957421	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09794836118779	1.65880184244346
Merged-chr13-37692560-1	2.69001053292501	0	1.362520762777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44193378-1	3.97158452108033	0.193485124126562	0.908879384221668	0.212883169632301	0.8314180901822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4979495926439	3.04002452185958
Merged-chr16-36634260-1	2.61075323333523	0	1.36103906895334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95674682-2	3.79680061436035	0	1.3370049317792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156147468-1	4.63458404065692	0.00751758358297063	1.0302418057134	0.00729691179418315	0.994177958403618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04041752988591	2.72065437544902
Merged-chr12-35392375-2	7.92654238422946	2.50598205467212	0.785188530942574	3.1915673190792	0.00141503131744074	0.0248299238639857	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883819140476528	3.34883822259402
Merged-chr5-53382251-1	1.81680423938966	0	1.4333600375835	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117755204-1	2.95077237532484	0	1.35370336192994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53765532-1	2.75629254679268	-3.52406639834144	1.1944092624879	-2.95046807574228	0.00317292832628421	0.0462911753537325	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38396547983486	0
Merged-chr6-13681035-1	1.48606506560264	0	1.42814549091132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63617473-1	1.44084961758778	0	1.61020855643239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62695987-2	1.91905386326304	0	1.45168371827127	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43784087-2	4.46540696959334	0	1.35487914260469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117885541-4	5.50355390750109	0	1.29960021342339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74704007-3	7.19333316886977	0	1.31135103148756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3423188-3	6.85858993629418	1.77803651560081	0.905569503766763	1.96344566397717	0.0495944122577852	0.368565502490302	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18325119812323	1.80442813729532
Merged-chr17-71215428-6	14.0418564743011	1.86981725554552	0.51563238390285	3.62626032405639	0.000287555468948792	0.00722975706589466	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07829967604267	4.23011760654391
Merged-chr4-133174486-8	18.8527168249996	0.923278821522683	0.47448845236986	1.94584044545513	0.0516739085606344	0.379743952856862	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60888640606967	4.27601054562869
Merged-chr9-121536317-3	4.0627707679123	0	1.33208050862822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69252584-3	8.55667190761886	0	1.29040744978756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14699169-3	3.89549907554689	0	1.3233583387095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53374377-4	7.45833666220428	0	1.3006254510362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12039438-8	23.4083771530941	0.712214437187535	0.380247439383015	1.87302888441055	0.0610643964768775	0.429343022614379	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23312477353573	4.95173657450393
Merged-chr1-55511722-8	27.02311040763	-0.468117138749367	0.437917336216554	-1.06896233611971	0.285086641151204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92848836820296	4.34011521712358
Merged-chr15-59802595-7	19.662276240969	-0.725145700655015	0.40597253992676	-1.78619396470962	0.0740678579550123	0.496821827748741	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09452617142683	3.42491520061759
Merged-chr11-63755036-2	4.72020428648776	0.0360733423643491	1.21863357628644	0.0296014676325233	0.976384894826321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	0.563523181795778
Merged-chr13-19701137-2	6.64549270601075	-0.213682152619289	0.699194531674309	-0.30561187615069	0.759900177000683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34103289570346	2.58162106618839
Merged-chr6-73709819-3	5.66677408485858	3.27203413295009	1.10725054562775	2.95509823487603	0.00312569508647966	0.0457963388163901	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.428339764855
Merged-chr8-11471513-2	3.02133809517625	0	1.42865361531708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53673782-3	4.74178901097983	0	1.30575477558878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35729794-5	24.3475080765412	2.04677475722414	0.570837816725777	3.58556265414241	0.000336352235628774	0.00818155220004712	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66157036073427	3.62693894728879
Merged-chr2-163676989-3	6.39379362873026	0	1.30983439456601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142712983-4	9.79289901588839	0	1.30510309859853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173694525-2	7.71191789998082	0.202067192839436	0.684556328346834	0.295179789408152	0.767856540224675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00237525385672	2.49898368658353
Merged-chr17-42480365-4	21.3811950127442	-1.72919468745852	0.617784085405512	-2.7990275701639	0.0051256760780515	0.0664436478866005	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52748056875992	1.40264952818025
Merged-chr10-118095171-6	21.454853329404	-0.323413348062613	0.391457119693686	-0.826178224362563	0.408702998871077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26176358121046	4.85738150259983
Merged-chr2-13785468-2	3.95761542582148	0	1.34334269020254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41330578-3	5.99809209978475	-3.87577295616975	1.11926641050333	-3.46277965620968	0.000534626014945761	0.0115812080752722	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19233928242959	0.306240821987646
Merged-chr9-22457606-2	3.92367768955917	0	1.31019581530416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35591081-3	11.27713429662	0.610400150765032	0.486221032827483	1.25539643403622	0.209334883215714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95324677833157	4.55656688269138
Merged-chr9-37243034-1	2.50940000893948	0	1.3589336356712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66144451-4	4.91623119782978	0	1.3373497716938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94082476-4	8.71868703662596	0.50172254123566	0.76362066171145	0.657031123426105	0.511160904410415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45911990771832	1.92713101668536
Merged-chr2-128375053-3	9.70592082852821	-0.166207387865137	0.763866059866043	-0.217587083125913	0.827750849546949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29604517281501	3.40978719347766
Merged-chr2-72984394-3	6.23770545606545	0	1.31021997526956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8820161-1	7.14266973884413	-2.24054136513746	0.657396060528677	-3.4082062544391	0.000653914474741484	0.0135739184455073	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1168165209678	1.63749632292653
Merged-chr14-87190446-2	6.16306220497041	-1.7533853770043	0.803792068610658	-2.181391737337	0.0291544542536755	0.250707588848622	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85706211782194	0.845523456341755
Merged-chr12-54969248-3	7.54458000446366	1.39008007469496	0.909505002172744	1.52839189600294	0.12641526570805	0.73625061969325	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.674898740693665	1.40264952818025
Merged-chr13-44416219-4	10.3566114861228	-1.29649213521035	0.649499428554979	-1.99614053255568	0.0459186282009999	0.348258899538364	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2470861629179	1.45575152610536
Merged-chr1-172346932-1	7.87425818165444	0.45680504635382	0.608032765461068	0.751283602302956	0.45248199556705	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17560405529648	2.28937764326066
Merged-chr1-182108678-3	3.60653625365668	0	1.32802422890971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54092372-3	4.42781517722159	0	1.3184806933185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37830898-3	3.50169134063961	0	1.33620641139316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102863791-3	5.41439705627688	0	1.30592370458602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132312434-3	5.79129590600263	0	1.29424805252236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166631961-4	7.52258943368832	0	1.33035896120072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105721144-1	5.41534412488542	-1.84631591426942	0.950209591243623	-1.94306175320013	0.0520086974617583	0.381517775520438	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18151494196304	0.869764003783424
Merged-chr8-45875452-2	6.91674061645224	0	1.2962429903316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31634362-2	9.7943637019374	1.59132500900935	0.623502672956744	2.55223446190382	0.010703446333381	0.116882921808341	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26052243541329	3.89695911540391
Merged-chr6-84031461-4	6.38152664754816	0	1.30346227011043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21747589-2	4.54338508549039	0	1.31218237993389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41839114-2	3.58155137121704	0	1.33218382008374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103870213-2	6.46113981803184	-1.36774557015063	0.754301539374766	-1.81326100869997	0.0697915740863079	0.474222751403127	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61080142661447	1.72678076939999
Merged-chr2-128770789-4	16.0617519894899	0.296284227564229	0.43624105168706	0.679175484330095	0.497026678857217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22462806644441	4.20530253317546
Merged-chr2-166195214-4	6.33653978963153	0	1.2906928954129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24595006-5	11.0555692755888	-2.44719841176403	0.670170621383045	-3.65160502964707	0.000260606477166664	0.00668351289518556	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82147785078386	1.26501898168246
Merged-chr9-40776656-3	5.47625129491355	-1.00998188553239	0.734617174434255	-1.37484110184356	0.16918071241081	0.902967532217539	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37024964215957	2.12164305972745
Merged-chr9-100395898-3	4.97455296172383	3.24514213163337	1.06412271299169	3.04959389740864	0.00229150988759804	0.0360040887508972	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.88903407179563
Merged-chr6-32610860-6	11.9233706754572	2.02964907086538	0.517442367353165	3.92246402482947	8.76479835270774e-05	0.00285231331253008	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64215962383161	3.97164016370396
Merged-chr2-119163336-5	14.9253772970543	0.192962317737847	0.459524548225078	0.419917322117323	0.674545853033886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96452625367836	4.38715019289131
Merged-chr17-27553036-5	11.8980390019693	0.457648895614323	0.568503031073212	0.805006957923127	0.420815664638457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2466036198324	3.12097634090368
Merged-chr8-75071812-4	14.1872857056887	0.340993594296159	0.587678008739343	0.580238819940943	0.56175357836361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28429794908151	2.45990924072161
Merged-chr3-21962041-4	8.31854319563353	0	1.31342828509416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98673353-2	3.52815500325965	0	1.32172597785946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95707474-6	23.4476366937376	0.641787884182757	0.277677230260702	2.31127299699801	0.020817780560936	0.193268610465373	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99554209513928	5.63452241364722
Merged-chr10-88725534-4	6.70444940280638	0	1.30235686958473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71334232-4	8.39543674417914	2.45730337092269	1.17385785708091	2.09335683711603	0.0363173124292758	0.294477118501483	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr1-34061306-2	2.84977710752518	0	1.34494370488842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38027062-4	8.21483680608618	0	1.30396717493443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115334655-3	6.29020233517881	0	1.3226804229608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137942948-1	2.55648403614428	0	1.34161147447518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95426731-2	3.05256260265913	0	1.38009870273293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101325542-1	2.75981487624419	0	1.36921052746493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44420364-2	2.39801696591499	0	1.65661291074503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108556055-1	3.00097634962988	1.29056205810334	1.34260948639429	0.961234127407574	0.336434460530499	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr13-113590966-1	7.02077780911577	0	1.28985148323984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170962504-3	4.35024302104459	0	1.32291931704387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37029957-2	3.86783804340027	0	1.31568565989442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100780488-2	4.12599204531427	0	1.31518193116111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72478089-2	3.56138675151756	0	1.31900274025388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66077246-2	3.26018157349552	0	1.37367683387785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28337662-2	4.7346906755316	0	1.37449917318809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52093524-1	2.80869962140478	0	1.32922670009665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40272435-1	2.90327094750255	2.02386702538227	1.21073238268832	1.67160559535747	0.0946021206979858	0.594753721294072	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	1.46928333126936
Merged-chr5-34232020-4	5.79012323664677	0	1.3225587355197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174036224-4	7.41150447681188	-0.30812351384021	0.676164581713716	-0.455693069665496	0.648610706267698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33280983649887	1.84016081186083
Merged-chr5-97320334-7	15.8146756292672	-0.391466222180922	0.54762753256922	-0.714840286324428	0.474707738441469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78170760335329	3.66093541386832
Merged-chr1-155087090-3	5.85187417192846	0	1.32896033000422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129643352-4	5.76448107436517	0	1.30229467548409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167057832-4	7.43852501266486	0	1.29587651628508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91187568-4	9.81426515775893	0.867499532152363	1.2489066067283	0.694607208800755	0.487301493331073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.688405034366054
Merged-chr4-46611395-1	3.4426700445406	0	1.32404700043605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10177305-4	5.22832684966053	0	1.34665468977318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68129783-1	5.08776980645034	-1.3178023773655	0.699389874334804	-1.8842171237021	0.0595356122347461	0.42122283641097	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16580016445236	2.35479685106325
Merged-chr2-165947757-6	17.6807600274548	1.86617868637946	0.416902672701704	4.47629340988831	7.59500900315296e-06	0.000405808224300927	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71571665594648	4.67960130276884
Merged-chr11-86578424-2	6.55321100119075	0	1.29102736013338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31289249-1	3.08096349619752	0	1.36017356657475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120012933-4	15.2636493918037	2.38493736371866	1.21624759816923	1.96089790212833	0.0498909341085856	0.370221778362438	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-24612753-3	19.5340703284889	0	1.4108914159979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100125586-1	2.62818701008207	0	1.34686504288457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61052147-1	5.66873225885741	0.871482962628252	0.719623841318918	1.21102569507843	0.225885557057348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71447339602275	2.79125192100576
Merged-chr5-125052419-5	12.5351635763328	-1.29831970830695	0.613028342583301	-2.11787876370582	0.0341853365500129	0.282360669200877	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00798886870725	2.035112151504
Merged-chr14-25467781-6	19.6247762914826	-2.270435842347	0.54944028635554	-4.13227041906027	3.59197472158914e-05	0.00139841632695611	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52514883508816	2.13485555437708
Merged-chr2-127890798-4	6.50843140105872	0	1.31277252543904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171685062-3	8.65810434318161	-3.35181958319691	0.978782364842948	-3.4244789276876	0.000615979612918374	0.0129385418790627	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52193688148679	0.469435083901436
Merged-chr9-47595416-9	28.1113984470934	0.255108206958341	0.33072325676659	0.771364582740504	0.440490861879649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89660147891643	5.20594710537751
Merged-chr7-80439521-4	7.70640474730147	0.67769585618618	1.15492418667362	0.58678817536765	0.55734597933017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.73596151290311
Merged-chr16-35056975-4	6.02574258325001	0	1.33015213384773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24039022-6	20.5453593633002	1.12043480452067	0.370564531646104	3.02358889973503	0.00249795624911645	0.0385161512635119	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78560902324047	4.44564625477121
Merged-chr11-116423350-4	18.7252029401684	-1.3049516339827	0.514982461243928	-2.53397296449789	0.0112777432402729	0.121469492299138	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48625277021273	2.68363892577648
Merged-chr18-67606288-2	3.8648521263264	0	1.36045226095629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110454352-2	3.40656298108849	0	1.32207774866372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150915311-4	5.51252888553046	0	1.30202726965197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129526102-1	5.29523119665946	-0.76293211207612	0.888896385916273	-0.858291387122348	0.390731584137068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73784472401271	1.36540726817539
Merged-chr13-99263475-4	7.77316435287848	0	1.30802161706342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173682437-2	6.60119931287136	0.333416466511622	1.0842165380955	0.307518336786571	0.758448868040066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656505258713436	0.683637474991079
Merged-chr14-117690105-4	8.85293752413824	0.186181111262728	0.790732158632704	0.235454077882279	0.813856317504946	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02001394558066	1.60572551668653
Merged-chr3-90444143-4	7.44608225152435	-4.90713445197824	1.01548893277269	-4.83228747612226	1.34973163869467e-06	0.000103041178887401	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79899960686326	0
Merged-chr15-100743455-4	12.7603370181894	0.746665889618078	0.449376280148638	1.66156052867567	0.0966009231069643	0.60412325785699	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01615665382304	3.54730276905561
Merged-chr19-28659389-1	3.32385233473851	0	1.4294791922019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95810587-3	5.57562094277422	0	1.2972249200497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126527494-1	3.02004860793435	0	1.3808973571288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155564996-4	5.38255571882887	0	1.30973146926895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24312358-2	7.32514292753819	1.28213914956729	1.01627248852508	1.26160962147865	0.207089292321717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	0.845523456341755
Merged-chr2-152808753-2	6.00488900849348	0.31959946812302	0.856155836694683	0.373295905283881	0.708928223670058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31079171885786	1.41959898789419
Merged-chr9-47727290-7	21.1809491993192	0.409112018387257	0.31727924419323	1.28943832877419	0.197245743529622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39756786509117	4.75420081281362
Merged-chr11-57970611-1	5.06248775830472	-2.57701003539278	1.16159575682	-2.21850847875653	0.0265201821235994	0.232834585657494	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30418812078207	0
Merged-chr10-95679005-3	6.30816831509527	0	1.29610108641372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65112624-3	7.71707556352554	0	1.29242980290354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50379400-3	5.53908066781838	0	1.29769314355682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57947169-3	5.3535146574705	0	1.31964471198211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125162144-2	3.49489109190145	0	1.38938291643632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30183969-7	20.8120082702426	-1.04476650055179	0.49594705725905	-2.10660893186039	0.0351514918777941	0.287954041399816	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52989387868386	2.9580951787751
Merged-chr8-35366722-3	9.5510298629501	-0.582786198550234	0.529276410575332	-1.10109989205212	0.27085318402065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01776306102225	3.84182112623054
Merged-chr2-78923106-4	8.18881745062094	0	1.30171390377673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54957136-4	5.62089769017106	0	1.30920347804238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72109126-2	2.92860823743954	0	1.39626821910518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7320446-1	1.77048984208458	0	1.51694990049624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48109304-1	2.46527712591208	0	1.36238888247403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136736004-1	6.73924765844712	1.14206162352231	0.549048974224739	2.08007241090816	0.0375188916856597	0.301489116587693	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31048825419963	3.90695849062881
Merged-chr7-96870652-2	4.78034366333128	-2.65324398102197	1.11500311056775	-2.37958437593143	0.0173321745493046	0.167617030945517	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31188583944429	0
Merged-chr2-131935919-1	2.54718299399487	0	1.34056397876925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191559981-4	6.48266504906002	2.44996463760703	1.23835522012212	1.97840215618055	0.0478833566923629	0.359644386577609	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.918668513615376
Merged-chr10-4096459-1	2.71354914165639	0	1.3376535464508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3713241-1	4.42256516221604	-2.72589846544673	1.25448139770208	-2.17292856668895	0.029785694045247	0.255195484867013	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16605022001931	0.844015785373878
Merged-chr18-3006332-1	3.53473050144171	0	1.34456075245795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144219489-3	3.86389571144265	0	1.31848756880933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34047644-1	2.31429643924878	1.4321610895335	1.43449533072828	0.998372778813027	0.318098628343651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.61242769162773
Merged-chr17-87601689-1	4.19030639575725	0.747692878683441	1.47292585582812	0.507624247157417	0.61171688281802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25339679193765	1.85467724076438
Merged-chr4-34080102-1	1.23318855740541	0	1.64902589190969	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117082561-1	2.14969826790307	0	1.53313159256657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111653641-1	3.46425902231912	0	1.31809657360084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44747578-1	1.60926088381583	0	1.44126195831968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57917742-1	2.22011690607643	0	1.36691680296293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110921003-4	14.0355156026055	0	1.29965222485283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21221085-1	2.9744241984201	0	1.34825699899726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22105524-2	2.51172266865254	0	1.4554284768776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-14997618-1	3.96230291317837	2.2245062185788	1.05926337953845	2.10005014951813	0.0357244298456354	0.29158738354895	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.914032537518954	2.39787032445846
Merged-chr4-22381920-1	1.74909602574003	0	1.50790778775987	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36308914-1	3.37967114382669	2.91461982932728	1.27144299668231	2.29237160999956	0.0218842088080729	0.201052551202611	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15637648126681
Merged-chr4-44292784-1	2.85884980424188	0	1.34867399206277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16904104-1	2.06847842513237	0	1.38105974054447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120977224-1	1.67521871361298	0	1.51321036812638	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96550436-2	2.21893230628806	0	1.55267295291618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132025602-2	3.6266925071978	0	1.31547660456223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36130301-1	2.4134298988812	-1.73789861013412	1.24904449448424	-1.39138246700469	0.164109478438856	0.882655974371974	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.938797182892614	0.420961122473315
Merged-chr6-83689620-3	5.93977693004742	0	1.32903939885998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33954591-3	6.60438774574348	-0.746111639097842	0.842188965737339	-0.885919513852356	0.37566089995616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18265818555165	1.20275690226768
Merged-chr15-103183383-4	5.84329600343362	0	1.29411701038632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88186094-4	7.5686661164802	0	1.29652659177347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84813282-7	24.2090930152116	0.837130305309888	0.343437391992991	2.43750484026204	0.0147890162303282	0.148130449814075	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82714394849379	5.64471849204817
Merged-chr18-30583618-5	12.2198701859759	0.980329499844409	0.464929318508547	2.10855599081	0.0349829250024382	0.286992651265132	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01919254702178	4.16684233090503
Merged-chr17-65724438-4	6.17861068649693	0	1.31527773229913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49986821-3	4.7384966536465	0	1.32368209309353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32560219-6	18.4331687705284	1.4116216087791	0.360852701262867	3.91190533932234	9.15708060783498e-05	0.00294913055396542	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90998515859055	5.26999052975757
Merged-chr1-51498659-3	4.15776318880605	0	1.32101954570214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3980554-3	5.69661526639017	0	1.29863492461703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113453733-4	6.00613688356211	0	1.30220446921127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135674464-4	4.30600653282881	0	1.35760666138779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65226445-2	4.48603869093515	1.94394879035106	1.32542226475024	1.4666637509046	0.142467548397948	0.799082443453289	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr8-26964086-4	5.01763609259753	0	1.3463382830289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128395510-3	8.68337724946858	0	1.29039044978959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87075342-2	8.6859960879547	0.411874712659761	0.633690317543096	0.649962136484358	0.515716679650679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47473180675285	3.82912746876109
Merged-chr15-99698812-2	3.92746632827162	0	1.35101357698598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71188814-2	4.2629152744778	0	1.33410429360612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38228652-2	6.06741044094434	0	1.31405900045273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79123007-3	5.29648865379415	0	1.3066081312871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79270497-3	4.21067046013853	0	1.35148844685511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84340330-3	9.28601286516128	0	1.32850637570087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80777327-6	21.738008496585	-0.164678689549699	0.438383751152459	-0.375649620034452	0.707177396492898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14321096832394	3.98733844465565
Merged-chr9-114788795-3	12.7864877424112	-0.899353834193777	0.665530288641588	-1.35133419100947	0.17658840419884	0.931370279384857	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77201371409039	1.97978184934906
Merged-chr5-5214717-4	8.13518039759512	0.796488959141107	0.834074366806937	0.954937582113071	0.339609262873612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04801960183406	1.46894927517136
Merged-chr5-122897102-1	7.71558515220153	-0.346755890030905	0.441576362424949	-0.785268233396075	0.432296316795821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24325314419801	3.98208324490383
Merged-chrX-106130110-3	4.98670675923608	0	1.32040320499633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115005251-2	3.88919404877985	0	1.3290248584996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154572539-7	20.2485809243689	-0.446764788537888	0.366332478538619	-1.21956095817693	0.222631354219445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96671802571849	4.51819350427339
Merged-chr11-22930299-3	6.1868781406491	0	1.2977606385453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127052348-1	5.20581346938928	-0.28131248823081	0.888530088698712	-0.316604346671933	0.751543837171386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48139844967663	1.31470332505763
Merged-chr12-32486911-4	7.18059325008988	-4.05761058016556	1.07384834586974	-3.77856947470474	0.000157731849173005	0.00453859331398466	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90400999666194	0
Merged-chr16-31188268-4	4.74185870536175	0	1.32859925160019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53743201-1	4.65970975096651	0.716112630675844	1.04763384066956	0.683552404357391	0.49425784817607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776169176876646	1.20275690226768
Merged-chr4-155721815-1	3.74515575372951	0	1.32121152760318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62470659-4	6.47942658663276	0	1.29938157709275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-48016674-3	6.34374210203693	0	1.29241081593055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50062332-3	18.4357573518396	2.04391576373175	0.841350939637586	2.4293260605523	0.0151269213773607	0.150637580665195	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	2.01259914296816
Merged-chr7-133744629-7	19.4267585461437	0	1.29377278931013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19951925-2	4.34671570670433	0	1.35326545871819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101066707-6	19.2319467353917	1.2480488294954	0.922022487003192	1.35359912267636	0.175864306979685	0.92902609174027	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	1.29948469469889
Merged-chr11-5780331-7	14.486452926622	0	1.28763633513739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61031922-1	2.06280539554649	1.02830253281878	1.28799767439015	0.798372973232016	0.424654082339265	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	1.20539659680455
Merged-chr16-50688324-1	2.54001670963978	0	1.3335792838585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76638434-1	4.44687964859796	2.7827432700978	1.15066153251315	2.41838559078276	0.0155895471422469	0.154303930257084	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.578845274708
Merged-chr8-83178928-1	5.97156378843988	0.233109269343731	0.970769978768383	0.240128222382275	0.810230855882535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68209763000214	1.82866868473699
Merged-chr7-41651735-4	8.26298125158546	0	1.29967205036828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71388473-1	7.40630104720989	1.16481548052365	0.583139839791802	1.9974891115989	0.0457720761131961	0.347524367549266	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17590558221996	3.22182750332539
Merged-chr1-23279941-4	6.40604048700738	0	1.30019857560729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53460448-4	12.2998894221574	-0.551691879553157	0.560632821079354	-0.984052054767354	0.325089919068783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21719391591162	3.73115435885655
Merged-chr16-94240342-4	6.21741804430621	0	1.30099742074826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142098025-10	43.0113641345335	0.449215167475245	0.296617475011326	1.51445954914858	0.129909325814952	0.749738780738081	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31454876643446	4.73866252172422
Merged-chr2-165922812-11	69.2415172524803	1.44456928365952	0.229417613459294	6.29667993611063	3.04088250208242e-10	9.1571201834598e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.75106059141572	7.22790308513115
Merged-chr13-34064131-3	6.47247901806522	0.282956923047978	0.736024352506173	0.384439620896382	0.700652639265521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89788741454015	1.56070666783485
Merged-chr1-128729782-5	15.656872565872	2.08963185606298	0.583016321800535	3.58417385230237	0.000338146806765093	0.00820822482721834	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45331862832548	4.05420713507685
Merged-chr2-163929008-5	16.0700941209459	0.0875627515777191	0.409808408280124	0.213667532945946	0.830806331583319	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66402425823208	4.43511725126348
Merged-chr8-75218159-4	5.48263578635373	0	1.33222801428267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35021574-4	8.00864313155879	0.367882700233072	0.616684765377437	0.59654903264541	0.550808508083182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35364306322716	2.83989899587789
Merged-chr18-33431535-3	8.11505031128519	0.901263203270271	0.576824986249629	1.56245520695984	0.118180790248224	0.702505405217908	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56582327139149	3.8188140265302
Merged-chr6-54285140-6	13.8435501341507	1.98246233724315	0.591852482137056	3.34958861722586	0.000809316624537171	0.016141783298135	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6308639767722	4.42388403259212
Merged-chr2-32132798-3	5.083112594912	0	1.32263529063728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33263202-3	5.89225694207833	0	1.3008515900373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70874269-2	7.14030496353594	-2.19907310622757	0.628412560616057	-3.49940985277528	0.000466289245048688	0.0104600538987132	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60470378280754	1.74427237692098
Merged-chr18-38943444-5	10.8407904155918	-0.0832168164021411	0.497116326820266	-0.167399081286317	0.867056048003789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93093133503038	3.30316893960524
Merged-chr15-78352358-3	5.196201889903	0	1.30792505037375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55491499-6	20.4494744647523	0.0448069564865088	0.354650905975443	0.126341017974479	0.899461988727433	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89579789314811	4.14115200854855
Merged-chr16-76407070-1	3.52542183786475	0	1.35713030442402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-11319784-2	3.83251893701025	0	1.36401686162008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68248020-2	6.48144601240391	-1.70374137929916	0.893347963852943	-1.90714195166579	0.0565022080015899	0.405735525722186	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96860178741281	1.44027592657175
Merged-chr6-89065125-2	2.03918285480247	0	1.48952729416058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7967554-1	2.10600226588037	0	1.41911622173224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75786171-3	5.9463476013998	0	1.2970205883276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154046478-2	1.76630728597715	0	1.67703810327193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20048466-2	3.6109981207171	-2.19093980922904	1.18779647466543	-1.84454143109505	0.0651042736241893	0.450381522787029	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17299760078911	0
Merged-chr12-35564748-2	2.04642794073588	0	1.58744068781444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120697278-1	2.53973998691611	0	1.39094253220144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92668776-4	6.23985956643498	0	1.32359904325201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33578157-2	3.43795950914521	0	1.36650525000333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50439023-7	21.3599770305357	-1.71350416458065	0.395491558217205	-4.33259352564888	1.47363029404706e-05	0.000691283885102653	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.58800138365687	3.77966037443516
Merged-chr8-18568769-3	5.91464600194526	0	1.3248081292225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8638179-8	23.8749599463777	0.118705955348268	0.49356687628312	0.24050632457794	0.809937760831182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33829634615099	3.15622171726911
Merged-chr1-154062848-3	4.61545426665013	0	1.33902887039743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74618763-6	16.7984625396181	-2.81264381255162	0.868951972816574	-3.23682309326586	0.00120868315458689	0.0219762407956692	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45200377746286	0.986577844696341
Merged-chr2-35437997-3	6.44838656559196	0	1.36222760783202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17723182-5	19.6711844721444	-0.319966170918469	0.38780842258216	-0.82506245941753	0.409336131328951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27424400503649	3.77797926889449
Merged-chr7-88357260-2	3.79258563765937	0	1.33201661666639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44191349-2	3.97051070491597	0	1.31549758470237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107506375-1	3.46420145229152	0	1.33466893451699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142426789-3	6.38065084228624	0	1.32151293683769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151926282-2	4.50389454119461	0	1.30478859505602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99526970-4	7.04590630240338	0	1.30000175866398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91168197-7	11.3110487617546	0	1.30036181925343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18419635-4	6.82969985273047	0	1.3110031490852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17485117-2	3.55188423175963	0	1.37925682605826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36082489-1	3.29040404632054	0	1.34352887391515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62433750-3	4.0585929623278	0	1.39813854716481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30478246-1	3.6049804561128	-0.268829602249175	0.774921136372935	-0.346912207747291	0.728657275086871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8359814309259	2.87208269895305
Merged-chr6-39508276-1	4.17812650570183	0	1.32711872042554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134045167-6	18.9001680818328	1.43708103938854	0.521938201137886	2.75335477697463	0.00589879341739647	0.0738292577385922	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84667849834116	2.74892957353768
Merged-chr8-111636558-3	10.1069702775699	1.01245721222566	0.519451135395781	1.94909038259055	0.0512846320018165	0.377605133835572	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3353097291706	4.25497198261177
Merged-chr6-55017147-4	6.23844548625652	0	1.30080975354071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132588634-6	14.8038574485449	-0.39296756695565	0.532946895456322	-0.737348449359446	0.460910476027326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63849809369134	2.57041169181843
Merged-chr8-84681132-4	9.29418178645731	-2.99271660959425	0.811436894952515	-3.68816925654999	0.000225873386251991	0.00599027203585573	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94990103244416	1.03956264035389
Merged-chr13-111818385-4	16.846018699713	-1.65929125755179	0.404346437301727	-4.10363763465934	4.06704313531795e-05	0.0015560011751785	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35596929350085	3.69712380031285
Merged-chr6-108407624-3	5.51079274538233	0	1.29787719113675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27987898-1	2.777419497376	0	1.37619803959524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17915169-2	3.85887935125159	0	1.35613205202691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20998085-2	7.53189707781358	-0.373426828123998	0.69423091575788	-0.537900026702692	0.590646069996163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65187931509399	2.76984584142424
Merged-chr3-96501578-7	19.6290755618515	1.35420135851755	0.357017534040005	3.79309481860297	0.00014878131166835	0.00433835947892905	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71501467905505	4.95456891247646
Merged-chr11-108350968-6	18.8009367537135	1.33669217391893	0.470666627817004	2.8399977710734	0.00451138490513195	0.0601103816666136	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51878331066649	4.23072246626526
Merged-chr17-57100570-3	3.85787755254778	1.29634159954519	1.33615122155439	0.97020575114029	0.331943944613888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr8-24938804-5	13.4369935663328	-1.6063129355474	0.611399807757774	-2.62727092021558	0.00860727748274524	0.0987044018795547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8034331094982	2.11933742128859
Merged-chr10-117682716-4	6.33025915283488	0	1.3061264284372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17043177-4	6.44742536681197	0	1.29724520680453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26493513-4	11.2513837125039	0	1.29614021076833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166979241-4	7.0707778330412	0	1.29999480687875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40544780-2	4.66928894669118	0	1.31362216427337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122372880-6	15.0021061692524	1.55068438637371	0.528125731844958	2.93620305330803	0.00332256756683175	0.0479150796015743	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09916371463547	4.81306874061924
Merged-chr17-71595247-7	18.5099829659189	-0.713719927712112	0.483022250230837	-1.47761294095878	0.139511408559125	0.787467608508645	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66621831808562	3.83054731850121
Merged-chr8-71526432-2	10.2531772776581	-0.345310045930406	0.5404755949893	-0.638900348381581	0.522887761358958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52766206178801	3.05573020603771
Merged-chr3-145670960-3	4.97558159523347	0	1.31885334945311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123063102-4	7.85414892361808	0	1.30132000056225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46734954-5	9.88688963525176	-0.210357426158397	0.565835857236055	-0.371764043349837	0.710068537162695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02208048635895	2.62358588376636
Merged-chr4-122898523-4	6.25304410008766	0	1.30955445467807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78455301-4	5.29208925178968	0	1.31554670917269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119091093-4	7.12288976484554	0	1.29097355795712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53453890-2	3.49235328579778	0.991507096784553	1.18644340381745	0.835696918701997	0.403325429162722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.73596151290311
Merged-chr3-104675533-1	2.65197429988891	0	1.35671943636595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28732379-1	2.70475584181252	0	1.37721271642789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69179373-2	6.76486651622442	1.41260177287754	0.637410333238736	2.21615762910524	0.0266807085707471	0.233929636691807	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68386179339246	3.85829310154892
Merged-chr1-70858802-1	2.89066286565344	0	1.3615767571261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55332820-1	3.18377736521188	0	1.35943141863322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31958355-2	3.00673153189636	0	1.39670347736486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6036362-2	7.29665689563055	-0.142714358639937	0.728469735858169	-0.195909797778782	0.844680768354369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06874326816887	1.92713101668536
Merged-chr15-90539401-1	5.4677449199719	-0.867910666986895	0.930426886653616	-0.932809100249061	0.350918541768866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94334662285044	2.74415333242656
Merged-chr8-30006685-1	3.88892579814257	1.17110252801918	1.50845352298241	0.776359702288842	0.43753663121105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789210977348248	2.48366051229539
Merged-chr7-80928578-2	3.44395367527483	1.88575435854281	1.31796496956184	1.43080764822583	0.152485350514429	0.839371000279121	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr3-121852211-1	2.09467198180128	0	1.47597164803071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109441105-1	5.15695418577796	-0.0336130632438167	0.838961609233549	-0.040065079109549	0.968041242269048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57852862017559	1.56112970471021
Merged-chr9-86513523-1	3.45791749072172	0	1.30942079000983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102733562-2	3.30251508110849	0	1.33734078997717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-137609914-2	4.98762375104744	0	1.34961094796604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88201700-1	0.71694706602201	0	2.05568264028477	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14474682-1	2.26414004758172	0	1.38975260097605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158597004-4	6.10641969804183	0	1.33396284161084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49997408-2	4.64853549144575	0	1.35167393597786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46176007-1	2.53849818414941	-0.645757327542213	1.01451611320523	-0.636517566489927	0.524439135090653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92961049911315	1.03956264035389
Merged-chr1-71830544-1	1.92145099507006	0	1.39040806447595	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5870075-1	2.8307555849601	0	1.40134300242183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50736381-1	2.371077066162	0	1.34992518689175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91023329-1	3.47346941043852	0	1.42605420890802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79179797-1	6.23058532743365	-2.96655135326036	1.15585227812384	-2.56654886563499	0.0102716151411743	0.113194896582277	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91798653920136	0.420961122473315
Merged-chr5-88399969-3	7.15827908334824	0.531862732960129	1.06970035159149	0.497207215243812	0.619042933880406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	0.581381506691384
Merged-chr5-99985016-2	5.51848722530808	0	1.31756821597302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62049614-1	1.76243051939743	0	1.45379738616001	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-118775580-2	3.3073442248727	0	1.33232168562657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76072772-2	3.86524267311816	0	1.35595141735342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118459762-1	6.95023129637874	0	1.31833322909725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62738484-2	2.98150443145154	0	1.41676703240122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166500036-1	2.31793618532232	0	1.36856587536247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9500900-2	4.10486725613301	-0.159060655839065	1.21693529821802	-0.130705926660177	0.896007943773881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648566509472229	0.563523181795778
Merged-chr8-67957063-3	3.38517425738688	0	1.35263419774484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106226365-4	5.96096465344157	2.40494260238874	1.20418225973159	1.99715830635539	0.0458079886868698	0.347661884870173	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr10-127103857-3	4.88570362167999	0	1.30215236104434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21847659-2	9.48984477329623	-2.5834384766903	0.839658817942604	-3.07677168569543	0.00209255511428893	0.0335147319848835	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52925630471665	0.989878296978726
Merged-chr10-99252543-2	4.10465381718551	0	1.38615857417167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169929878-6	20.7789284673701	0.123548868224713	0.433248954695672	0.285168300778701	0.775515204799297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17399009611117	4.25562484009752
Merged-chr15-78369126-4	5.99638407297811	0	1.29915880546228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99162990-2	3.88840867568285	0	1.30941638144929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65885006-2	2.98925678183816	0	1.45284072707164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79347877-2	3.31500395772998	0	1.35387713153176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172526885-3	8.72392825991892	1.4147088769518	0.729125199874756	1.94028251553342	0.0523453650803507	0.383041458739148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63845250113175	2.74357072367402
Merged-chr5-146810816-4	5.6800347695451	2.45880778954176	1.22129094371382	2.01328586132374	0.0440845649093575	0.339231038455826	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr12-75689198-2	3.64477129651853	0	1.33813674106624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50037021-8	31.5272790246246	0.755921917433336	0.279372406587028	2.70578589585173	0.00681429641319093	0.0824300283999212	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98748097385225	5.74411331254844
Merged-chr3-135192122-3	8.38542365598166	0	1.3268356749688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191230759-6	18.3577702778232	-1.8320249659865	0.685492487375357	-2.67256753316296	0.00752732215590801	0.0886590471521206	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49634166167632	1.34805514843284
Merged-chr10-127617031-5	14.0151682188033	3.84596391694096	0.853156753520161	4.5079217870249	6.54656982930066e-06	0.000361006035498296	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.593738791144649	3.59724981636828
Merged-chr4-41563549-4	10.9884897702476	-0.135552093041907	0.848693587311674	-0.15971853100868	0.873102802667831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54880774930787	1.57403368136583
Merged-chr8-35725674-10	30.0875553656235	0.446769140156293	0.407419549168537	1.09658248129738	0.272823949104557	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68062545730756	4.97275083347908
Merged-chr12-105731269-5	15.9194921345141	-0.245945497598525	0.450590960652116	-0.545828742863775	0.585183663639001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45915616570087	3.13848883591296
Merged-chr18-75459531-1	4.09754953728688	0	1.32556072255171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77371370-2	5.68127114817809	0	1.34630601282935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41163815-4	7.04532632134852	0	1.30313601119147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117444962-4	5.42606887707557	0	1.31260610232948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90245040-3	5.44750348186574	0	1.29535607075869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137879888-2	6.16449892658641	3.2109768469796	1.06523027100632	3.01434998082266	0.00257530538627838	0.039411219150292	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.87744667331019
Merged-chr4-133837192-7	16.7299002658504	-0.235366763634868	0.359517439820978	-0.6546741202654	0.512677591105252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66594998277885	4.38281590282677
Merged-chr16-50069240-4	5.24018901184116	0	1.30488990671219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53556630-4	6.46190867483488	0	1.30272121574553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7111686-1	3.68104174411082	0	1.32637483897008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57780784-1	3.10118825390438	0	1.414612461641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53133458-6	26.6408612987355	0.192904851547044	0.416906212249712	0.462705629897165	0.643575382291154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52332587245903	3.44765639880039
Merged-chr7-84665571-3	5.01647811833893	2.49551443517661	1.23959545213431	2.01316843400796	0.0440969128145435	0.339242922139745	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-8842970-1	2.68995838512204	0	1.3446071697255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21621769-2	3.42578717111067	0	1.39859618010246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34804409-2	6.55250235134007	-1.52859490786337	0.647940898906597	-2.35915792696971	0.0183164589578052	0.175070467007672	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38722996138813	1.88903407179563
Merged-chr18-64991333-6	12.7763155813333	-2.63465186931676	0.634124315312732	-4.15478764288895	3.25589790039187e-05	0.0012941600012105	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22054855875351	1.23021119707292
Merged-chr4-156031989-6	19.2769667132293	1.70194957417132	0.464142468153896	3.66686888390269	0.000245538613916569	0.0064012766220959	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1843330862558	4.1466980456172
Merged-chr6-136814815-5	16.3231235662593	-0.0761459555361768	0.414667120516185	-0.183631524586249	0.854302530599763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92563388097079	3.68013160626018
Merged-chr6-54960053-4	6.52158323141894	0	1.31394827560454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65718394-4	11.401647325995	0	1.29450825754145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31948291-6	22.0080326138371	-1.16560825440088	0.598293838386429	-1.94822038873821	0.0513885982151829	0.378242773031014	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56820758667182	1.44597835587314
Merged-chr9-44444619-2	5.35325636747986	2.99383583133606	1.03597160385196	2.88988213596237	0.0038538629051623	0.0535818139150501	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.035112151504
Merged-chr10-17344014-4	6.63494860377711	0	1.3218146248331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120366221-4	9.53875431919372	0	1.3174267296204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158155793-4	7.4206823306082	0	1.29779915587814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75835673-4	7.84135066623486	0	1.29452767736072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21112018-4	6.80298781258861	0	1.28805944850312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23753362-1	2.68900222012709	0	1.36314827235649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33503671-1	2.84644394425351	0	1.37047741360079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33024631-2	3.46202813772793	0	1.38967840716807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45838454-1	2.40942082752738	0	1.39479093910102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120343853-2	10.4342370566836	0	1.33798657102191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59297156-2	3.23351589588875	0	1.35066028719393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123174016-2	3.26744460166419	3.37083753742214	1.13265151885252	2.976058815369	0.00291978858930392	0.0435707935959475	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr5-64769479-2	3.38543547191875	0	1.35306611115786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92530123-2	2.82043090712961	0	1.37768394878133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76860560-2	3.25383402144038	0	1.38799294328966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193600083-1	1.83855239409778	0	1.49439677594186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125427063-2	5.32565540304	0	1.33205903269048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191421800-4	7.15347386341321	0	1.32357382656301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16089088-3	5.05149883554605	0	1.37069551011794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96263830-3	3.69436576675706	0	1.33349723844041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55193977-4	5.70163157841152	0	1.3106623366866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52262638-3	4.76261862871897	0	1.31240780190129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128416471-6	14.3530692176672	-1.29140238251513	0.495188757716321	-2.60789923517395	0.00910997672675383	0.103206881274423	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11737077411517	2.46890512470268
Merged-chr7-81868260-3	3.65793972818056	0	1.33931975469075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50735604-4	9.12342979793661	-0.170643647728762	0.765719576483354	-0.222853970264755	0.823649161861225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77012376334504	1.60308582214967
Merged-chr2-122409209-4	10.1514014232819	-0.262544020783022	0.602136295923123	-0.436020918454219	0.662821552468828	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31939563625101	2.50670197153503
Merged-chr11-22436416-6	15.721143264858	-1.75649641506059	0.501542071504874	-3.50219157047031	0.000461447702604069	0.0103725322004175	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36792110448203	2.48401992256515
Merged-chr14-61529704-4	4.73364527691724	0	1.30299092137732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12287571-2	5.45327738530512	0	1.29698654633633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24981566-4	7.58833674282356	0	1.30400608944741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19673190-4	6.89424860503721	0	1.30023491987003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156542927-3	5.14179140165339	2.23016603166166	0.900581764359677	2.47636152531617	0.0132729101599337	0.136997565520618	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	2.4873962880981
Merged-chr2-181659350-4	7.2015170554796	0	1.30342016817845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5369344-1	3.06763209854196	0	1.34846786133182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152793489-3	5.64962485911626	0	1.33063540692611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16902112-1	2.80941154426013	0	1.35543421618901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168575114-2	2.75142288142843	0	1.35889155145876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56552978-2	3.47948569728089	0	1.37979478392845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73808387-1	5.82841356782478	2.55303068785851	0.850107264891069	3.00318653103811	0.00267168623921298	0.0406522458051373	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.615449858980057	3.16157403613654
Merged-chr15-88146268-1	1.92335218268437	0	1.51069969000246	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128602204-5	11.6091335467134	0.398023415978896	0.539659252896191	0.737545801063955	0.460790501199289	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39091036916213	2.40893929589491
Merged-chr12-77047438-1	3.50681998126917	0	1.32694530344921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63092153-3	7.03331604163196	0	1.30545115243391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-4870725-3	4.95192240456241	0	1.31318865282154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129421469-4	8.22168094632157	0	1.29631825962711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54230836-6	15.0929397703699	-1.20775336187768	0.472706051809793	-2.55497757486645	0.0106194639376722	0.116227317383564	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57140639367793	3.33115673484981
Merged-chr4-138007173-6	20.1657818278267	1.31289504627628	0.404599584349153	3.24492435746871	0.00117481826454173	0.0214920700769159	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3595062017698	5.26622102602462
Merged-chr5-150168935-6	16.7580680806602	-0.591009173100986	0.403017610510343	-1.46645992057913	0.14252303240124	0.799082803542808	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50819064022468	3.89068978608518
Merged-chr1-58770348-3	8.17313379864789	0	1.30561280845216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155257532-1	3.39040022867714	-2.92903243344863	1.01448421385221	-2.88721341688154	0.00388670498416333	0.0539008115227371	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99700813844659	0.735627456805112
Merged-chr13-21279711-1	5.68964206557399	1.33373226234111	0.786931292109531	1.69485223896201	0.090103454772959	0.57325482967518	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66621566434461	1.92797716160218
Merged-chr17-34317454-5	14.9293308259477	1.05372424753969	0.425500861014003	2.47643270339942	0.0132702639662388	0.136991890859059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93668599608366	4.89515625575221
Merged-chr16-10417469-3	4.73381707279529	0	1.31480845895173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40818913-2	5.83584332515644	0	1.32423545635164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101843793-2	2.98977944296686	0	1.36403156774605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50708414-2	4.40218764732259	0	1.33306000732478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30933192-2	3.33976265839433	0	1.33330338094172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78894352-8	20.6084690412276	-1.20913198305227	0.484330800593143	-2.49650028776093	0.0125425566996509	0.131579051227387	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02854247159033	2.30712077184164
Merged-chr1-174169241-2	7.26533395920981	-0.951152307436336	0.816833930652548	-1.16443780276914	0.244246635317677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83100097942385	1.85467724076438
Merged-chr3-89865176-2	4.96634022556578	0	1.30770724827524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-259225-2	4.27788584664399	0	1.33775018745242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109117047-2	5.48861789949808	0	1.37898124592455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82899153-3	15.3667213677478	2.74687283954315	0.634671236345368	4.3280247823432	1.50452543886564e-05	0.00070174674752401	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86456277768772	4.4150555265066
Merged-chr6-55167071-5	15.8932777627974	0.100152219890753	0.398282265039234	0.251460405551543	0.801458170651572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46543723705381	4.21219430111531
Merged-chr4-145210768-2	4.1472616321947	0	1.32854984269282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34716026-2	3.74721278175133	0	1.32549131856006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-168362689-4	12.9798238316561	0	1.28610272626909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9911543-3	7.30798449712905	0	1.30092711338507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121463591-6	15.8501323685743	-0.260999246203882	0.4415924627627	-0.591040989628792	0.554492956982442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50183237273121	4.23312575791105
Merged-chrX-139616209-3	5.90452441476811	0	1.30605653661955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30796660-4	6.64506980772704	0	1.30017997829938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99349512-3	6.70761157632413	0	1.32661603012401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171027639-1	1.97700413674934	0	1.50990091207275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64256764-1	2.98700232285742	0	1.33011424852705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177338893-3	4.29044261361578	0	1.32024953934626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-91814293-1	3.75986894581288	-1.17571794119876	1.53987715914389	-0.763514111640183	0.445156849679073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43946370375363	0.961371261847668
Merged-chr3-101846292-1	4.05836732848526	2.50887439018903	0.876020490508502	2.86394487043643	0.00418400824682947	0.0567933889043268	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.962065319910909	2.99797140027069
Merged-chr2-35545166-1	2.12981516494346	0	1.41781094017871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33177847-3	4.92803850245664	0	1.30940196785789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150829956-1	3.40847032242432	0	1.33489545976648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129729529-2	5.82087708703573	0.323788938596641	1.12552201912142	0.287678901963545	0.773592541409652	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5502334277482	1.43393032742955
Merged-chr10-43037485-1	2.70042403819626	0	1.39422999532167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-74362957-2	3.47031195457469	0	1.4010842627334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122209283-2	5.50804903247266	0	1.31912022002822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67807367-2	6.4924755697344	-0.394966114958003	0.936967054353248	-0.421536822584048	0.67336312853961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66779594040711	2.22189651546941
Merged-chr1-36737501-2	3.65754080197993	0	1.32419708920827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77172676-2	3.31536852088738	0	1.34179651830633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182271934-1	1.2315858806601	0	1.5621149901571	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4308045-1	2.20966162173439	0	1.4193731047093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5860942-2	3.53852408866005	0	1.34334083332518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83407931-1	2.46067174303544	1.92193048359794	1.29271994287571	1.48673383913497	0.137085121571166	0.778073860348251	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.683637474991079
Merged-chr11-35837854-2	2.28308470871666	0	1.40854561682998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129145109-2	3.30726214245492	0	1.32187111937095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142813201-1	2.59242841435484	0	1.34497415279033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34216813-2	7.87698353966919	-0.359954858522141	0.838820088663359	-0.429120455490905	0.667835566712212	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02739165905392	1.31470332505763
Merged-chr7-143042627-1	6.93268038358051	0.758818653175914	0.82000360246744	0.925384535985675	0.354765919788296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13142748025913	2.46601346246115
Merged-chr2-59176915-2	4.13262001920372	0	1.35142519141444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41634675-2	3.8468695094209	0	1.32946614560732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171492424-1	2.13758251801687	-2.58955515400363	1.29554666817365	-1.9988127156038	0.0456286214670011	0.346895549502004	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6254255474842	0.683637474991079
Merged-chr11-70848644-2	7.26882739570749	1.94850404315355	0.640691677007575	3.04125074989933	0.00235597536877078	0.0367869931774661	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6905153669456	3.2696278817166
Merged-chr7-38025528-4	16.6084223284237	0.803356755571311	0.400091231706764	2.00793392083161	0.0446503140097665	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93116272751058	5.6262124625619
Merged-chr14-103535860-3	5.61590921070765	0	1.29787540397037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136551106-3	4.57752561487301	1.29926079857821	1.35154630071373	0.961314309315259	0.336394155250192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr11-72660553-3	4.62399842861137	0	1.3290982521728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-62858190-4	5.11667468872948	0	1.31443439464513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27096962-5	13.5086837056794	-0.20320200025242	0.460547513004735	-0.441218320617293	0.659054951218376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26023990057298	3.20613844154895
Merged-chr8-120608072-2	4.36121114776465	0	1.3068754700406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-72980024-2	3.17885063526202	0	1.35946363419479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52965229-1	2.58666049680336	0	1.33373671612541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96948962-4	9.2230594439935	0.513272121811447	0.547824290656542	0.93692837387023	0.348795402835103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49738753952794	2.56861251764816
Merged-chr8-108748407-1	3.18225339318581	0	1.40739035963861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59616640-3	5.19389095415631	0	1.3159429364644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76594322-6	11.2973860038817	0	1.28369639241509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115336961-2	6.1852851013398	1.6339634777975	0.779914052205154	2.09505582464834	0.0361660302605928	0.293724262168617	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40120466277349	3.16413234300438
Merged-chr11-31736885-2	3.40209059538464	0	1.41366004796712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103856441-4	5.44619839836044	0	1.32276801212032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56647737-1	2.36154778108568	0	1.36078798947432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101994326-9	35.8047569500361	-0.945476103731597	0.307530870573128	-3.07441038998644	0.00210919073584605	0.0337480846779128	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.235896043631	4.36504795478837
Merged-chr4-126083878-3	11.4841972311708	0.115917278018192	0.559607867139014	0.207140186593189	0.835900378269476	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6846338678183	2.32928830729835
Merged-chr4-102543144-3	5.82583088389822	0	1.32131075788611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122132295-5	11.9837512720408	-0.0201252516950878	0.504165804398649	-0.0399179228727987	0.968158562104762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28094740415403	3.01774201252683
Merged-chr17-83273810-1	5.74152067329106	0	1.29564061791513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71218835-1	2.48559688515316	0	1.56474655246774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32801836-1	2.69621816346972	0	1.3352288172028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28013634-1	3.30224814904096	0	1.31651756308035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76610570-4	5.53251453476696	0	1.3034797122977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30236538-3	5.3196260287359	0	1.3204542080795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7315998-3	9.02077553090956	1.76247632551549	0.825880065255397	2.13405844221516	0.0328379971543785	0.274613739704379	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	1.99834080004871
Merged-chr10-94486747-3	4.52108480725477	0	1.3267074657232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79088662-3	3.59642323870997	0	1.37248520479062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92693165-2	6.45330633219107	0	1.32945032560508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116595932-2	4.70687478865138	2.84917284346849	1.05466614325497	2.7014926587813	0.00690290042277366	0.0832892288678964	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.89255009218154
Merged-chr1-181230969-2	3.50092032056126	0	1.33687559029222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117879438-5	12.3704165793193	0	1.28857081589359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28606847-3	5.69034801164848	0	1.30286975747165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53236308-3	4.4047777838575	0	1.31247906802491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24035046-8	20.9209728055083	1.14362179425809	0.410053290653656	2.78895894832369	0.00528777671362538	0.0680187120331819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42772151932444	4.43144355104622
Merged-chr17-26606716-4	14.9731555306281	-2.34213645126402	0.516149016826937	-4.53771367358688	5.68673994583864e-06	0.000320626150561494	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82569156286584	2.13938900109644
Merged-chr19-4295566-3	6.2637813905613	0	1.31074685808529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28539308-3	5.55261613611699	0	1.30017317192302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81141099-4	10.2652488132892	-3.82570092315202	1.04237719491191	-3.67016943753774	0.000242389744769757	0.0063407527068553	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74742621217027	0
Merged-chr13-105227218-5	15.2814079066763	1.79869868993359	0.467334374679926	3.84884739361513	0.000118674907910036	0.00362888653827291	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95711950184586	4.62726586140041
Merged-chr1-128597426-7	20.7758872182584	-0.130208734066247	0.458798064058121	-0.283804018078316	0.776560575107872	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97145528190574	4.63318615323122
Merged-chr11-97413037-1	2.55190715000156	0	1.41274767701179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27703703-2	11.5663058109829	0	1.32806091011221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76612752-4	14.0877398333102	-0.128006786781537	0.46066217825045	-0.277875616504254	0.781107842250711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60978820839928	3.34909255126794
Merged-chr2-132109582-5	8.7690348410066	0	1.29574515538162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31942501-2	7.51049626717233	-0.186259643096888	0.823433244521769	-0.226198838018816	0.821046774319355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46105542071768	1.40508790535098
Merged-chr2-35308327-1	4.48763477127254	0	1.32426190648167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141678838-2	8.04160373324172	1.17364311012769	0.578549782656558	2.02859485097135	0.0424995734520438	0.329999609656332	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93668564913635	4.2669860604792
Merged-chr8-124926868-2	2.66562461624962	0	1.40118011072301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3952776-2	2.87756012143151	0	1.34496813743719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121850126-7	16.0251223802811	-0.71301587622836	0.451073840780523	-1.58070766195305	0.113944895674989	0.683481104532569	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1831216978199	3.24561012417377
Merged-chr14-119027332-3	5.22310668233734	0	1.2961859515465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82571633-2	5.04013930283018	0	1.33278106441287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83356738-2	5.08762249357065	0	1.30461385888137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75641920-8	19.5020653401526	-0.711080875049847	0.383824942858953	-1.85261767969872	0.063937176572262	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10964010828846	4.33480160814088
Merged-chr19-45984572-3	5.89815947614865	0	1.31858477096702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101892302-3	7.93551361867284	0	1.29531830925811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-48131801-4	16.0305562767021	-0.860506482392689	0.530233452056486	-1.62288229657192	0.104614568701658	0.642917672000241	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73046193356614	2.5278814224759
Merged-chr11-115929969-2	7.89512515419102	2.02609225658855	0.587582163918707	3.4481854300616	0.000564366438813838	0.0120717149953287	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65153178247799	3.59447490278741
Merged-chr2-158207984-2	3.0962411446308	0	1.35149504419509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85663635-1	1.18677226203343	0	1.57845729060939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13052194-1	3.84345938567679	0.212860795079395	0.924588647108117	0.230222159600565	0.81791914341712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27540192369389	1.60230598860646
Merged-chr2-156787956-1	3.92626086104583	0	1.33867298620856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67486694-1	2.1926541142098	0	1.39178457746932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118700352-3	8.14979232136806	-0.578971553125931	0.612031616601522	-0.945983079012868	0.344157216821231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56646839238104	2.08364730863447
Merged-chr3-98060026-3	5.72564009814451	0	1.3095229583496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5202048-3	5.38582285319681	0	1.30452691694272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12839787-3	6.17531865427043	0	1.30584554024939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137471259-3	7.57511705786082	0	1.30811038490589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72961072-4	6.99347512219121	0	1.30473390041371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110373035-2	3.67977165309168	0	1.33656763121931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8984762-1	4.7426907274383	1.1862644414037	0.839699956538148	1.41272419054819	0.157736835964408	0.859312334929003	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.967986318324044	2.21043983090998
Merged-chr1-151661156-4	6.30292315229771	0	1.31722003859309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90334276-1	3.74201433283572	0	1.34769767189195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119728401-2	4.02955963707465	0	1.31764435364195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46509368-3	7.04412688308453	0	1.29705573436773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77538128-6	24.6391564061251	1.77965647603706	0.434547105491349	4.09542821376011	4.2138878673416e-05	0.0015953691574699	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38969144256004	5.1031509020584
Merged-chr12-17450589-4	15.2253513803794	-0.453301596183211	0.435236094233262	-1.04150736161203	0.297640138388577	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50305317905106	4.05377451294791
Merged-chr19-3384591-1	4.22638662119226	0	1.35797615825372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141159629-3	8.11635086906456	0	1.32630150007189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63899364-3	5.95354510002282	0	1.30980366373556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37290278-3	7.79907085807127	0	1.31869388816993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33937060-2	4.47587538012658	0	1.32531183339461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127292126-1	4.5507776815084	-1.59211507348032	0.885333412371909	-1.79832258811385	0.0721259022292156	0.486793968918645	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86635111113514	1.64109723835872
Merged-chr12-102340604-6	17.2104383969801	-0.0825959129259063	0.398249597784578	-0.207397354285802	0.835699548657757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30194748829417	4.21412063064307
Merged-chr5-103817953-4	6.30670360991232	0	1.30841238224367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55209162-4	7.08144353698389	0	1.30318449470863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75725094-3	6.72221109708067	0	1.32236525780777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-43034525-6	11.8415552062133	0.691299115644261	0.550260242985739	1.2563130345257	0.209002497922806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37582968598237	4.1060018359192
Merged-chr1-165718479-4	7.51806865176237	0	1.30264435855024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70408078-7	22.8035517154938	0.00127396824969595	0.386054384469844	0.00329997093918632	0.997367008915321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93270268051025	4.99575102140151
Merged-chr19-43646441-4	11.103750502967	0.192628569364211	0.390576405160596	0.493190491845011	0.62187799553056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28062811408387	4.41154139892969
Merged-chr15-8716547-3	7.96122738185309	0	1.32281314364085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84293878-1	1.82066049314193	2.48688482048827	1.58942087992683	1.56464838979764	0.117665376000367	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr7-92715285-2	3.27906896636392	0	1.36131948621978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59265362-1	3.31734125799498	0	1.31025355328129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124845349-2	6.16402393141948	0.526262537406263	0.771933224148247	0.681746193768176	0.495399452523694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5167240022295	3.4727993318842
Merged-chr5-123820740-1	5.07204029791096	-0.648642782410063	1.14622735898511	-0.565893648694954	0.571466079390938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2628122582971	0.61242769162773
Merged-chr12-24763202-1	6.14465750550204	1.78271766119561	0.643207030462958	2.77160785993349	0.00557801889358155	0.0708181897454789	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13922213300913	4.43993490155359
Merged-chr7-4300395-1	2.81101840609074	0	1.39854800244869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62875910-2	6.02708976290205	0.274920140567265	0.716122477733783	0.383901007321078	0.70105181973009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66875549455292	2.52965008261298
Merged-chr5-139393021-1	4.22765948904686	1.76799067388991	0.968584857121273	1.82533379588914	0.0679506731647376	0.465245671481867	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	1.73021936081125
Merged-chr14-20827208-1	2.39867723154006	0	1.40287389063752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165586561-1	2.21539648840782	0	1.54357453004084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68842427-2	4.80242531913554	0	1.33178812040518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124993097-1	3.23779149293263	1.14176797938665	1.0162076501258	1.12355774850279	0.261200688961592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18351401988243	1.98033324113269
Merged-chr10-83353974-3	5.35856616677057	0	1.34083768884206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117018038-1	2.88915462835178	0	1.37783097065643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50690780-2	2.73444062377995	0	1.39249946234988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-89012651-1	1.06703157018837	0	2.19411800642223	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168197783-1	2.66884043761403	0	1.35649799407245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111536562-3	9.65703034125629	0	1.29372845708661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116184417-1	4.19648196949461	0.0525250024026178	0.973539810666218	0.0539525983705522	0.956972930216955	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58393357469297	1.95953533891209
Merged-chr2-45455030-1	1.44217407863862	0	1.68760767440599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37059803-3	4.62280485271366	0.766820709311291	1.32136356505357	0.580325301523055	0.561695268195991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.306240821987646
Merged-chr11-77784428-1	3.55860279725512	0	1.33638111878868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148963263-1	3.03596147385669	-0.41787394471406	0.815229066888017	-0.512584697585937	0.608241859631658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39394328293387	1.72320011534497
Merged-chr8-61449003-1	3.71106787193268	0	1.33093309296141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191186646-3	5.71629939872645	0	1.31252791550704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139035428-1	2.21363393200238	0	1.39125533878724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112581915-1	2.82452158751531	0	1.35463561983162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34591896-4	7.65013655388153	2.48959162794238	1.21941680735523	2.04162482665956	0.0411887606962937	0.322935926722422	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr17-72955707-2	2.28554615147038	0	1.40208325913217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119712440-2	3.07406789635237	0	1.33650226374218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92017215-1	1.98403992438818	0	1.47467112357529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78630639-1	3.07191821615749	0	1.41336029723204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90463876-1	2.21853706070274	0	1.46356030103951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55299551-3	4.18317313198941	0	1.34857923040132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83577056-1	5.63716022639845	3.06423424271014	0.796435663294062	3.84743474449204	0.000119361055165035	0.00364475117327773	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17745944755967	3.67628675887117
Merged-chr7-34984699-1	1.86570419990153	0	1.41045381334639	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76215579-2	9.52383456116672	-0.810809582484428	0.504586249756087	-1.60688005841691	0.108080681692509	0.657662745681973	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45293303693331	3.51187542435926
Merged-chr4-154246594-3	10.5607982078017	0.0961491282337806	0.559645498205177	0.171803630230454	0.863591911452149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95080821137743	2.98116326404708
Merged-chr7-125597238-3	8.23693893908024	0.996181711464961	0.681016168972079	1.46278716549211	0.143525626073902	0.802994127035296	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97430674936141	3.04845038512503
Merged-chr14-54739525-3	10.6083943600278	-2.85580029394882	0.629344301220518	-4.53773918093868	5.68605234715567e-06	0.000320626150561494	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72933884588178	0.887107926668329
Merged-chr5-138831959-2	5.49427758488527	0	1.31319867950464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120140842-4	4.88673150187416	0	1.31371154873752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18195018-7	23.2426883622772	-0.179394929892153	0.318898553963899	-0.562545447956035	0.57374444782632	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80817038748408	4.64115958077566
Merged-chr17-43266077-6	13.953168736887	-0.794715133360587	0.52222394809574	-1.52178990691344	0.128061731270948	0.742201498149126	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41944860980189	3.29901922785349
Merged-chr7-115251770-3	10.0932309798934	0.941710949406598	0.5481725569861	1.71790969359029	0.0858130884402368	0.552630538801194	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6840382501361	3.28403812158027
Merged-chr3-103730050-1	7.65099353462407	-1.18484468475692	0.577484297321461	-2.05173489608734	0.0401954334328574	0.317376847885875	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19604220631408	2.9941777749128
Merged-chr11-106742395-2	4.18848038001685	0	1.34952325782202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114973408-3	5.6246999601892	0	1.29914592247357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46849567-2	4.80805382998068	0	1.3113393329347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78090222-2	4.63457180947183	0	1.30334208326846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80895358-4	6.86439234177117	0	1.2937023526844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59402033-3	6.41680695004471	0	1.33691138799247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24572187-4	6.23861167415929	0	1.30387809131649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102032093-4	11.4167513359592	0	1.29564397531192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84605508-3	6.16998907045064	0	1.31696630154526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83140167-5	15.6347061080966	-0.389326791691258	0.422069550381147	-0.922423309948988	0.356307815665868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61088963609269	3.95833187971146
Merged-chr1-55838297-3	5.92982204046089	0	1.29357549928697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88911053-2	3.58221053628345	0	1.32472261179502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117121434-4	5.14978445915256	0	1.31658630166446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68141852-4	12.872941895666	1.00542955300003	0.470753343208602	2.13578844952462	0.0326966610258371	0.273712017857334	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83247411736062	4.86449630622335
Merged-chr3-69060273-2	8.5624895855065	-1.11917113930652	0.671928996906822	-1.665609230229	0.0957912715054303	0.600331283492593	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11906255294398	2.05066483796074
Merged-chr19-11720296-1	5.29389719007051	0.780811051526099	0.787493275213046	0.99151456412737	0.321434384312005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92243157486886	2.64492808120042
Merged-chr4-120104799-1	5.52468665022622	-1.754677173734	0.826173741139017	-2.12385977229789	0.0336818710804837	0.279595470988985	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18462722197982	1.20539659680455
Merged-chr8-25593661-4	7.37331990066249	0	1.29789873696894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50381756-1	5.44928782723445	-0.261454170654879	0.759866457889254	-0.344079104874747	0.730786796489756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92463632619265	1.57612722179308
Merged-chr10-8893862-2	4.70735943654262	-2.08749996344251	0.891943493660746	-2.34039485491947	0.0192633617033585	0.182010357702091	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0948059491508	1.03295826569721
Merged-chr14-48457483-9	30.3649304420431	0.398954435443618	0.356526934417045	1.11900223217622	0.263139186754433	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80724810125266	4.99703181505824
Merged-chr4-9111186-3	4.59658940302787	0	1.34343039938624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94128141-3	4.58792851392265	0	1.30005160854613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52901001-4	5.16131883613732	0	1.32968214106824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135679550-1	3.39997326325675	0	1.38880983092837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45512654-3	4.67158326312287	0	1.32930524690302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97630253-4	6.13642326382457	0	1.31958415928423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10356194-3	4.29408861319801	0	1.31474012172134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125543332-4	12.3801366823897	1.02892944224296	0.434074230932543	2.37039973562231	0.0177688626282716	0.170949675776706	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11831575731676	4.26744357399055
Merged-chr10-94358480-1	4.87218854936994	0	1.32347678554351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37448450-4	5.49386349706967	0	1.30368030215302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137922907-4	5.70421484600285	0	1.29588161346082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114953593-3	6.4710923652821	0	1.31578252797702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54898846-3	4.76228115029603	0	1.33582979037284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54489864-3	4.21273037150686	0	1.31443351301576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33901888-2	4.25045463455506	0	1.31188617275475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5809063-4	6.19023879355637	0	1.32093989460052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118449308-2	4.03385840939682	0	1.39654544232689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39538429-4	6.32414465404745	0	1.30191728855089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96666072-4	5.17010665865499	0	1.30298501523591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58705504-4	7.22250492739455	0	1.29110261671024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114880736-2	4.88402492111424	0	1.3311265929452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9810340-2	4.00178947904991	-2.5991746434174	1.12138325099551	-2.31782902153209	0.0204586151829402	0.190548555835862	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03101825166704	0.423054662900563
Merged-chrX-169973026-2	6.5311177004042	0	1.3022260937544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74944881-2	3.06629988851777	0	1.35073384224444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77519223-1	2.60939575864264	0	1.34468117190849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49209158-3	6.79130153133498	-3.528533463403	1.00570542171721	-3.50851590058862	0.000450614297228957	0.0101677630755261	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69707895961832	0.469435083901436
Merged-chr5-134555659-4	7.72387238520119	0	1.31248436263678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28657292-1	1.87802236548641	0	1.48369057547035	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18917523-4	8.59788553115754	0	1.31012702268088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49609796-2	2.35318864886879	0	1.4250834705856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90856555-3	10.2269821900552	-1.38387226238605	0.573171618105174	-2.41441170266061	0.0157606424731257	0.15557325423699	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68376111328261	3.37861092065192
Merged-chr9-69442736-2	3.28168742328339	0	1.35114353436893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51161804-1	2.33791714217769	0	1.42571340942534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22548312-4	8.8280768312648	0	1.29622381531337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-135725587-3	4.89771263471929	0	1.32223974862219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137704420-3	4.57655171228036	0	1.31075868164434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9976436-8	18.1349132022332	1.09957914318128	0.422866030484536	2.60030142861402	0.00931419066430088	0.105029353433892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48228650061885	4.38366350568037
Merged-chr10-69307182-3	11.8027465797451	0	1.30282721521625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46520787-4	7.85254694205814	1.19818252785352	0.997155738136168	1.20160019345935	0.229518466500184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	1.35032549026822
Merged-chr15-100757746-7	21.0859363292286	-0.320244692787671	0.389948216330961	-0.821249282278726	0.411504290272871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8892184870203	3.49403659022988
Merged-chr2-11534932-4	7.6286875945593	0	1.29424989126514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-17002505-7	16.4777604396828	1.08766171814898	0.403686417595732	2.69432329337919	0.00705317149220274	0.0845625501209818	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93698960776509	4.39552918688424
Merged-chr6-120927878-3	8.92217840909919	-3.95148740517988	0.970525464170359	-4.07149276454869	4.67128135848054e-05	0.00171971578395081	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04969451150282	0.469435083901436
Merged-chr4-129276664-3	5.11415293409796	0	1.30405315129707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6376774-3	5.74807609889843	3.54446021183966	1.07942355888213	3.28366023019763	0.0010246837742797	0.019369102086804	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.35032549026822
Merged-chr12-51695194-4	6.14147358385503	0	1.30187824706325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79679206-4	7.43298970426622	0	1.29674551364226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72798005-2	2.97984440778647	0	1.38252306795955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55812380-5	8.60531356182087	-1.63310308439933	0.797932469931902	-2.04666829078744	0.040690664665532	0.320203778086928	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44164985137595	1.2679693671925
Merged-chr8-35718548-4	12.4404763394794	0.314282705447183	0.628417657871023	0.500117559573232	0.616992302585804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13818287499553	2.09872908654163
Merged-chr10-121470898-2	10.9313240162911	0.851776468557614	0.509097513260048	1.67311064456629	0.0943055164209613	0.593419182790388	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09691265889004	3.18384308032993
Merged-chr11-75073161-2	3.91746393758736	0	1.35699710154986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57541149-1	6.05466802708432	-0.746451368516695	0.696264494306178	-1.07208018593642	0.283684017633402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70803485852762	3.02255929726976
Merged-chr8-10831454-1	2.38556819774215	0	1.37135343444334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65693153-1	3.38812817341388	0	1.33640647695848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79023010-3	12.0474534811926	0.444977592547638	0.617879508453169	0.720168878332958	0.471421023064923	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90797229016856	3.71721954100566
Merged-chr15-28405348-3	5.64671913474197	0	1.3093510534538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35038783-4	12.229320154733	4.25818666119229	0.70530614948033	6.03735932875351	1.56656623296246e-09	3.73608894376515e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	4.66521042336232
Merged-chr2-152707774-3	8.13134917797755	3.39246422442423	1.09087227043352	3.1098638368322	0.0018717360636213	0.0308630998772136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26648457881507
Merged-chr1-37344657-2	6.11709945482703	0	1.2977897398679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8594076-4	6.34143533985855	0	1.31005016606878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123160961-4	11.8780862104471	-0.268891998731765	0.468335319285745	-0.5741441818692	0.565870237647076	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03358809981441	3.39377372231773
Merged-chr18-53160375-6	12.0893424317939	0.901447375744968	0.620608338238932	1.45252217896872	0.146356466821031	0.814565171696371	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2248220122888	3.28802884991767
Merged-chr6-4967392-2	4.27866207678761	0	1.31321922868512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110242172-4	3.6923876154477	0	1.4180799466823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127836806-4	6.11978037330759	0	1.30369109671313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108911709-8	17.6342094312711	-0.153882823225101	0.381081534328758	-0.403805509747808	0.686355744538529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1478925058919	4.15863797896525
Merged-chr16-55781414-3	4.56945686286695	0	1.31990445589474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112091023-3	13.2696120173701	4.83166264923659	0.953652872639642	5.06647941599851	4.05240548410654e-07	3.97014226033622e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.39148447418226
Merged-chr13-17755171-3	5.02208025321905	0	1.32256265106975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38378431-4	10.5337402218564	0	1.31964971182423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89488346-6	20.1875540880006	0.397156611536272	0.551471999877827	0.720175478762762	0.471416959667478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55582874841661	3.0037679223529
Merged-chr4-134124264-6	17.9100959309636	0	1.28811068778309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37218063-3	3.7044780168418	0	1.35437138618467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44109338-3	9.66246344084672	0	1.3003066834069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167367969-3	7.44128284639251	0	1.29582514622161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38434207-4	5.62896402674492	0	1.32345878744512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108261968-3	6.39691296559703	3.17217120526106	1.11504825933521	2.84487346507523	0.00444290685411314	0.0593835531374263	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29948469469889
Merged-chr4-130816892-2	4.19462059626719	0	1.35718332789197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121408417-6	16.4786668084199	-0.38552511822866	0.479814567576019	-0.803487731054726	0.421692885293705	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68956860740901	3.39400068267737
Merged-chr19-21476411-2	6.74224824950498	-1.0212930546313	0.684612152121325	-1.49178341556856	0.135755932976402	0.772946518800729	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7162666611133	2.37363547236218
Merged-chr7-35151121-8	35.6879326956285	0.837884985920419	0.381605407639214	2.19568425695002	0.0281145507574505	0.243624643123772	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44322731785635	4.17829959996157
Merged-chr9-52174832-6	15.3827411711846	-2.01867112461397	0.660675145577241	-3.05546702964015	0.00224710307665861	0.0354427220968702	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30184331129129	2.08137696679909
Merged-chr5-90747371-8	18.3994955725594	-0.361326951275468	0.417241167510971	-0.865990653393443	0.386495287390669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36073723962522	3.87533107910034
Merged-chr7-38156012-3	9.65870047830039	-0.703567327151584	0.965945700886353	-0.728371508363244	0.466386199437452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32878228804015	0.73596151290311
Merged-chr17-34300836-4	17.333869670217	1.40581649259206	0.43569913144317	3.22657630263243	0.00125280823423131	0.0226399355293361	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86899010753764	5.15586940000712
Merged-chr2-156434498-6	24.7606991188905	0.870217695426527	0.323729409608123	2.68810206795834	0.00718594278533822	0.0856103221970303	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20789402802886	6.1064353503825
Merged-chr2-128392076-3	14.7002429096284	-1.24486680256828	0.451233442197519	-2.7588088252186	0.00580124617632285	0.0728735549092643	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59507701376725	3.35228908326008
Merged-chr1-152761954-4	5.31875440526631	0	1.30809940168448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60341386-4	6.29738507094856	0	1.29369634121989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80176574-3	7.48275694975162	1.23346808272494	0.972154408180709	1.26879852865478	0.204512930046457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90291182009043	1.54028618764495
Merged-chr11-102276739-1	1.89997231399198	0	1.43789547097557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77471211-2	2.64673320307297	0	1.46752404352767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89858741-1	1.86454409551788	0	1.39931194384523	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104987335-1	4.17149569359582	-2.98013613960851	1.19187919657517	-2.50036761122424	0.0124064493718712	0.130551550197825	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31319313671188	0.423054662900563
Merged-chr16-76282075-2	2.58337606939402	0	1.37879381252539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13853472-1	2.49704040416482	0	1.43548206745899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20508135-2	4.699280269185	0	1.40337598080673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105627851-1	3.55186411666661	-1.41590184985992	0.949599863583174	-1.49105102492035	0.135948099067586	0.77383836948349	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56080954890011	0.793480537552656
Merged-chr4-132476049-4	15.5951629756389	-1.47449812368499	0.418031829317212	-3.52723888535795	0.000419917715752524	0.00963819566335245	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96318310006119	3.4599694565202
Merged-chr1-9773328-3	6.40077105960117	0	1.32520193557713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86267189-1	1.66730591274261	0	1.53412742188887	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166843470-1	2.11899583106408	0	1.3952801025162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55695407-2	3.15541321998295	0	1.40353917445949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121718469-1	1.4638935287634	0	1.48562777044415	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72738372-2	2.82253829786915	0	1.33432934393763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-49112698-1	2.2348968016351	0	1.38066136350468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85424130-1	3.72382303536179	0.907228865956021	1.03019622422631	0.880636955000838	0.378514349941467	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857370518835178	1.31470332505763
Merged-chr13-52033183-1	2.02171604290749	0	1.40243463372901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107628916-2	4.33212857945717	-1.05865221224654	0.820810598515354	-1.28976430635932	0.19713250443184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48945563626412	1.66398411766936
Merged-chrX-13516696-1	3.13411906442407	0	1.40909934069813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60541387-1	2.15245552405614	0.88028703680926	1.42774541598895	0.616557424699919	0.537526684105789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.563523181795778
Merged-chr11-58636114-2	6.22761453033072	0.819932953394667	0.702699195721033	1.16683348776761	0.243277620420814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7185520285491	3.68586657330931
Merged-chr5-148791045-2	10.4792911659575	-0.358238498949447	0.50010590042146	-0.716325279600869	0.473790520816863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75324675463737	2.68582411074183
Merged-chr16-28840254-3	10.1326321294192	-0.0136066604959778	0.555653838378881	-0.0244876568038749	0.98046362920773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82987559986232	3.61147319683825
Merged-chr13-63700856-4	11.1878035900804	-4.48927526305745	1.08469546563157	-4.13874253677602	3.49214572680746e-05	0.00137138073716322	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37587404838467	0
Merged-chr2-102897598-3	12.7700118443577	-1.19218535961671	0.454695885097075	-2.62194006739733	0.00874308045862735	0.0999344648678438	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61299792279005	3.395428159082
Merged-chr5-74277909-1	2.60783962998842	0	1.34913153713025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47509206-1	3.18416159782588	0	1.37568486235287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57098102-1	1.55743590181906	0	1.41002498725414	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107971836-1	2.79416447763926	0	1.32963316933038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55497505-4	6.58052150838322	0	1.30677626340705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166160849-2	5.68206271316099	0	1.30346929184262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145037802-4	6.05264152313094	0	1.31665152024733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25312069-3	9.63438673157544	-0.0735795272984956	0.833899807524426	-0.0882354530299377	0.929689539750942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74484642754057	1.62635771927786
Merged-chr9-58226070-3	4.52488187875673	0	1.31510652294264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120055657-4	8.72810804478231	1.37462150385771	0.73496370737447	1.87032569100358	0.0614386040198594	0.431474055816189	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33155368487268	2.72065437544902
Merged-chr2-84831816-4	8.65560543611435	3.83632699433909	1.04626904540545	3.66667351116408	0.000245726205590334	0.0064012766220959	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.57167815999277
Merged-chr11-19972624-4	8.07549032352808	0	1.33127599194756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47702519-2	4.27430562187968	0	1.34273160092508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76748895-2	4.82156942118004	0.10616640051469	1.31488970720362	0.0807416773688758	0.93564739125083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr11-85518599-3	4.199823260726	0	1.33241733229356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92659564-4	5.78461731460941	0	1.3133658902463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95843136-5	15.2548018224824	-0.840491175073374	0.498295635446721	-1.68673196248222	0.0916549032457468	0.580469209875613	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88088396869339	3.09760506888322
Merged-chr10-8769529-6	16.0783188675331	-1.55178976711058	0.505930814225239	-3.06719757618821	0.00216075984259136	0.034371229959585	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22657750041285	2.82286752253771
Merged-chr2-53668795-4	6.21927263964852	0	1.30219071230071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120191418-2	5.0012373465325	0	1.31694788140978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98299227-3	5.13720869566222	0	1.32415315906413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11544550-3	6.37016603766605	0	1.32498963238486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111210751-3	10.1897714326242	0.421815804018007	0.551451230482451	0.764919508201969	0.444319476571258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05059474992155	3.54730534576741
Merged-chr12-34747489-2	6.78948764565298	-4.47170200038539	0.966374236268921	-4.62729844459659	3.70466478089418e-06	0.000228597757103221	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51457773832811	0.469435083901436
Merged-chr13-59879400-4	15.5533436500479	1.92358731365088	0.459276293894381	4.18830089691771	2.81050727070582e-05	0.00115144456496265	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91694948270591	4.73853988941583
Merged-chr4-40772984-2	4.67941162154041	0	1.3511743025584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56690844-2	4.25526212051524	0	1.34087840683772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53436510-2	2.96972148290698	0	1.35649151399825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34350378-2	4.02791194485457	0	1.33260741167895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134994354-5	12.9473772868797	0.369115976137816	0.521927473799052	0.707216988312691	0.479431642905317	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35002373397031	3.69735711339692
Merged-chr15-67088769-5	14.140009902646	-0.493936234484533	0.494225321739267	-0.999415069924551	0.317593662559845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60317462771753	3.09163890315488
Merged-chr11-103359767-4	8.67835470010857	0	1.28606908958419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59263616-3	4.45772492267667	0	1.30820972702715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47670821-3	7.50343353179182	0	1.32062232061822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90685205-1	1.67092429772545	0	1.46941300335863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-117429121-1	3.11364669906717	0	1.32131209138471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81402350-3	7.01709877437233	0	1.31303786417405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-151743817-1	2.30671615790062	-2.12158490925575	1.16642196164586	-1.81888285630539	0.0689293038799833	0.469829382637049	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95050736688347	1.15307255889252
Merged-chr6-119341598-2	4.20391060932154	0	1.37613580339819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76964667-2	5.56258241732995	-1.47275638624199	0.709230942182372	-2.07655405122367	0.0378427375183394	0.303470915951458	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61917780035036	1.99834080004871
Merged-chr3-52360996-4	6.88402789316046	0	1.29938548422703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140697830-2	3.95117279036335	0	1.33871469136988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102988033-2	3.44267482926983	0	1.33115206213782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143488171-2	4.36231114128269	0	1.32321811640319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122566240-4	7.97287336360689	0	1.34083376257873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44461399-4	5.59746514058029	0	1.31744533367203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103321655-3	5.71002029758453	0	1.29202693834396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102792489-6	18.2692612425766	0.206271971525872	0.454194128424381	0.454149357327533	0.64972133028821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41655919752976	3.60408270238959
Merged-chr1-77757700-1	3.1740151328137	0	1.44646726534562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93725926-1	2.97190512260995	0	1.42769572991722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84268724-4	6.22553515503261	0	1.30312729143448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29150314-2	2.1239930338608	0	1.54749237477555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126909614-2	3.64393728712043	0	1.40105653406032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-98325924-1	4.67589105234653	-0.155655583740448	0.792186461374588	-0.196488568449349	0.844227779330712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30386527788379	2.48395282305067
Merged-chr11-35839136-3	4.6204915402293	0	1.3749925325555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122429773-2	5.28833551858239	0	1.32668234270597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122111101-2	4.08564310147941	0.116076489614919	0.994268182186477	0.11674565443667	0.907061610607647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61341890482337	1.86728154592049
Merged-chr1-86191068-2	2.69174140304835	0	1.34044581855517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34315678-2	3.4403224765919	0	1.38921067517785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118892725-1	2.4464892304962	0	1.37756437161985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121409102-4	5.8203808968996	0	1.3119074533664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23015609-3	6.88498441138513	-1.63205085170324	1.04163003731714	-1.56682391370626	0.117155856116981	0.697936600767641	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23725360745526	0.469435083901436
Merged-chr1-184622062-4	5.62321186695748	0	1.31076261173494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80213473-2	4.93375289547567	0	1.3076957785848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70852095-4	7.77181795415558	0	1.30743947219956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43739654-3	6.61692409190734	0	1.30482229748366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46591001-4	13.6939079967702	-0.637486096769287	0.396218445575095	-1.60892584353059	0.107632557733925	0.655913188257118	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60892362203237	3.23146167096622
Merged-chr16-32773626-1	4.69699447050069	-1.88577174324845	0.99394538604191	-1.89725891354853	0.0577937747650762	0.413103479085394	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47995955989655	1.40918939303534
Merged-chr10-77130730-3	3.95859090530863	0	1.33038070665482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38951059-4	5.58494919154204	0	1.32817465181811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86274427-1	2.46355624180908	0	1.32733270041605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39374590-3	2.88936098134835	0	1.39169914876424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-117481626-3	4.90182183671738	0	1.32420655472478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79936356-2	3.39743608553573	0	1.3906218266914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65549140-4	6.4305200420567	0	1.31022344403507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65416444-3	5.50137494860829	-1.25644095670402	0.924954997567976	-1.35838063474183	0.17434293583226	0.923450878243889	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1661520894675	0.73596151290311
Merged-chr11-69628989-3	5.33473184183339	0	1.31214184128656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19300871-4	4.26369534909992	0	1.33169763243528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51362769-4	7.49556031831603	0	1.30245513773012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91343053-4	12.5624969093468	0.309410756513371	0.414305734976421	0.746817459649649	0.455173754958197	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3166522202906	3.5922031765631
Merged-chr10-86929136-4	7.31270586458279	0	1.35061325963613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3172467-3	9.45401956946431	0	1.35164575060142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15256989-4	11.9302666064115	0	1.29792603452476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99284657-2	5.4294943510922	0	1.32453029495308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140159514-7	33.5977252720457	1.78566953052313	0.429314651529946	4.15934914906711	3.19155720856433e-05	0.00127325830780782	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37726316069724	4.89396735656453
Merged-chrX-94625346-3	5.41175199177671	-1.47527118258958	0.63735430385278	-2.3146798784783	0.0206304577518859	0.191930223840367	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97374953671121	2.41476118703329
Merged-chr11-108357513-2	5.12607864672553	-3.02812399535871	0.926236485345825	-3.26927738570794	0.00107822543484308	0.0201135367585658	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00301996987045	0.773587911294612
Merged-chr11-34030661-2	3.58015449412959	0	1.34647354499642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101574598-1	6.24112459593932	-2.81082205275908	1.0648033228109	-2.63975702605715	0.00829654851314642	0.0957686378979096	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21549439529278	0.382164212378408
Merged-chr8-46140124-3	6.93015396367698	0	1.31004354003456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45042319-3	4.51302839299111	0	1.33181558684646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88127911-3	6.18450858430797	0.427688113263035	0.777873032731912	0.549817380557573	0.582444636297804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66822233572525	2.98897327079264
Merged-chr16-8784917-3	4.66104879458197	0	1.3237779876178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-109478438-4	6.19659700789282	0	1.30401204406497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22850329-4	7.98853474729983	0	1.30748429141257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128363455-6	10.9798947003535	-0.369126542249799	0.559072582898393	-0.660247977706473	0.509094708225661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99475853477554	3.49690686312675
Merged-chr10-118178964-5	11.9770225290019	-2.32599258005462	0.686444184863224	-3.38846570681939	0.0007028481714387	0.0143481151548995	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90330876620757	1.43750690265746
Merged-chr3-59224962-6	17.6035775480055	-0.393979143773861	0.38876095548065	-1.01342261412739	0.310858342262182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36802547853872	3.81228348077634
Merged-chr5-64861524-4	7.10409156209764	0	1.31549365299894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105122552-7	19.9180480045874	-0.422383142996647	0.328221511784292	-1.28688439919879	0.198134583704617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14848797097711	4.72839213316409
Merged-chr3-31408333-2	3.41523762985643	0	1.33838497078585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18929752-1	1.67599794577481	2.34928562628653	1.68774108515757	1.39197039578331	0.163931362829228	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.926147595614233
Merged-chr18-74875645-1	2.51013691205483	0	1.9725157902168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34001843-1	3.58238736461163	0	1.33232313317691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121455742-1	6.4273687694195	1.41160335562086	0.640350308293798	2.20442363709022	0.0274945648627039	0.239586589614382	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10504244486961	3.67549401654471
Merged-chr11-11762890-1	1.80952823471335	0	1.37881886671918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37226742-1	1.8181045987487	0	1.4529196837507	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85588799-3	3.46279819902997	0	1.33380139474789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173482557-1	6.96351399031885	-2.91961078381169	1.11349298475507	-2.62202889805713	0.00874080190881381	0.0999258994984862	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68747833287538	0
Merged-chr15-81417137-2	4.41970727002765	0	1.32689535735878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101645703-1	2.32025188719059	0	1.36683692749454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118147546-1	3.99107653780968	0	1.37784394029526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21091293-1	1.67706769266262	0	1.49727214746843	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77096466-2	1.80954356745401	0	2.24923714985878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6795191-3	9.20460007184435	0	1.28723235865811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58359715-1	3.38124327456768	0	1.3880637310281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45699911-1	3.29951103528084	-1.12729977911076	1.26259150694368	-0.892846001981741	0.371939647453643	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36564338895504	0.581381506691384
Merged-chr15-33250968-1	1.93148748983234	0	1.64051945322283	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127252971-1	2.74969762825528	0	1.36520549369622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-142467351-1	3.99139687451963	0	1.34245053707478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13052311-2	3.29375020411831	0	1.32607009419948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86519669-1	2.44727856574144	-4.49653512528048	1.3663022027973	-3.29102530616908	0.000998229328721526	0.0189988209333158	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35468479784972	0
Merged-chr16-4375223-2	3.79796980577571	0	1.34305912260008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128924358-2	3.70484882597815	0	1.34446940872437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10772417-1	2.83456088292416	0	1.39151446026865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128558827-2	8.30689609769502	0.164411894763677	0.628078125583292	0.261769815038517	0.793498911901213	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35944859620548	3.32426417345237
Merged-chr3-68798615-1	1.23174528911854	0	1.54780800125187	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95810660-4	5.72245459306857	0	1.33917847535839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34043084-4	7.4334789762443	0	1.29873799604558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71634449-7	15.6124922442142	1.96211918205492	0.502204543492623	3.9070120083128	9.34445113061473e-05	0.00300060198319975	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79213135350026	4.53570191869317
Merged-chr19-5718216-4	9.93171171283642	-0.0424284119029056	0.76267919735057	-0.0556307449453129	0.955635971497922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94951333196213	1.89082683942207
Merged-chr9-56118714-3	4.81050001090407	0	1.31842436485703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155150692-7	23.4861335170201	1.62520462032421	0.403969170431761	4.02309071899522	5.74393587125368e-05	0.0020376939926327	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3341052330537	4.62941812389388
Merged-chr1-21068649-4	12.150267909386	0.320482692527159	0.488776921432843	0.65568294752475	0.512028142974037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35764094817942	3.94604828874349
Merged-chr9-118856845-3	6.04811205021721	0	1.317277700774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5414967-2	4.17860572774807	0	1.33456729494019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103013010-2	9.31770967238532	-1.78296717778074	0.690845575255324	-2.58084764764077	0.00985580663339091	0.109772889085659	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26198245573067	1.80435620208164
Merged-chr14-9487670-3	9.06323656137247	0.833980257332746	0.681513682184407	1.2237175556911	0.221058794636991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80047123175048	2.89914403434115
Merged-chr17-34684383-1	6.08487719291966	-1.59656467863235	0.729472472698564	-2.18865651328298	0.0286218149489649	0.247102803495186	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28656665367683	1.17564474993106
Merged-chr10-44325831-3	5.92850160707288	0	1.30419752343767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33755566-4	8.55557059058649	0	1.29482147960932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100952873-3	7.53406287861691	0.651620270081359	0.67217282101003	0.969423710262803	0.332333827090651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84732562719047	2.76501444179017
Merged-chr4-102793036-4	6.12442012589429	0	1.31358684056524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9712322-3	6.07059296432062	0	1.33358506431364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-48595888-1	3.48603004303102	0	1.34829456028944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51270150-3	4.11385492133154	0	1.32798171323111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30325605-8	19.4087502675302	0.242340588483157	0.375878540834078	0.644731109005055	0.519101452765721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60411809318092	4.59294594264445
Merged-chr15-25858252-2	5.17520219313366	0	1.31393919054807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135241877-2	3.96870120876598	0	1.3432971135761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103488513-5	10.5161378684667	-0.903170017252589	0.620216829238782	-1.45621655955561	0.145332763196773	0.809971406725487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62390577754176	1.97260420973384
Merged-chr8-26104700-4	8.39027224670908	0.819804393329934	0.655011913764953	1.25158699575061	0.210720395566752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43139514258099	2.31776252764976
Merged-chr16-59570970-3	10.725819905104	0.0886880462132666	0.8504674099868	0.104281534097401	0.91694593166473	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22871541631087	1.14490468848716
Merged-chr4-56262234-2	3.45142033337867	0	1.37790571531268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50149900-3	5.40670514967361	0	1.30366196834478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153351529-1	2.25941764447862	0	1.33860561529001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132304233-4	5.35713877654484	0	1.30601641743894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126569499-1	2.80508215634027	0	1.46132704979314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148489879-3	12.3595719361322	-1.51301217844859	0.594729769651545	-2.54403303089245	0.0109580721747733	0.119046747187487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92361978285322	2.0440319008787
Merged-chr13-52268482-3	5.38674654387555	0	1.30262474198879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122498145-3	3.80020179773912	0	1.35272021800554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41636681-1	3.44584105334579	0	1.31467310662912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83932764-3	4.91456384881898	0	1.3232981922048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64744066-2	3.6750642743632	0	1.34565645135367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73593564-2	6.03026626256379	0	1.30691851605386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17590870-2	9.23703640573716	-0.853280450541875	0.61508034740332	-1.38726664596611	0.165360469742434	0.887626489851067	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07622723621931	2.45916162824808
Merged-chr12-69419804-5	16.0029324477769	-1.66358793849317	0.541071353595299	-3.07461839818168	0.00210772043540434	0.0337328189007915	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81976340109266	1.67333134268571
Merged-chr19-16456328-2	5.20303166006524	0	1.32368709410258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113812852-3	5.80786467528597	0	1.30369666257871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47882674-8	19.8546810947763	0.694928614195049	0.402575259073211	1.72620795374976	0.0843100076467763	0.545604145857145	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76411179378344	4.53481343275733
Merged-chr5-21138775-1	4.40043060818024	0	1.33990755169696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-80955573-1	2.76261601418578	0	1.36696114811891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149395290-3	5.19529336905014	0	1.30396147928465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68060448-4	6.91987634786405	0	1.30062325489783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65493065-4	5.60996082471315	0	1.30589175666761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150837593-4	7.27135709726436	0	1.33151168277565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23272997-3	8.37886361609143	0	1.30985431166737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84329667-4	12.2683619161746	0	1.32676184652528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33822624-4	8.15299489315636	0	1.29898506826967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36252537-9	27.2027195143017	0.0821814799894795	0.350985663048862	0.234144834508635	0.814872540268446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51139836438681	4.80837374492136
Merged-chr4-132488748-4	10.137160145288	0	1.30056351170518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44238034-2	2.6849406640311	0	2.43378566597157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45092506-3	3.69900842817337	0	1.31990301134991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52577810-2	4.3345359838206	0	1.31811103649224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102660528-2	2.90574939365468	0	1.3827536128069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155765193-2	7.22511392281056	-1.48930198209997	0.720370138883701	-2.06741215621155	0.0386953337618575	0.308476915945143	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93624773827346	1.46261730325446
Merged-chr19-10022048-2	5.15149577781981	-0.177424782657035	1.08902829331236	-0.162920269148733	0.870581211575751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12751608310997	0.581381506691384
Merged-chr9-104445015-1	6.42761086731398	1.82286289711921	0.990904371487846	1.83959517141112	0.0658276938107714	0.454136030379927	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.847480051707322	1.67800608098903
Merged-chr7-48983481-1	4.52779272751568	0	1.34001675128303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104629956-1	6.34956954399978	0.423404583949959	0.748631084796368	0.565571738268293	0.571684944419735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56920862591492	2.09093093088911
Merged-chr19-32304248-2	4.39077121323562	0	1.30443425467174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50244652-4	4.97242480338139	0	1.30983901454212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97440115-2	3.82215196930099	0	1.34218390300722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52891977-4	5.72737653223094	0	1.34939368142658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38436497-1	2.8622772011934	0	1.36134399045297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36453665-2	1.98577516326164	0	2.25629917593684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40581432-2	2.76690342235212	0	1.34257803090275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20508750-2	5.45764238248575	1.56580936226989	0.709560428233009	2.20673151992024	0.0273328217848595	0.238495202610953	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42667357082971	4.18972617322721
Merged-chr1-62051628-1	1.98988641360366	0	1.50630333828469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117505341-3	5.89664142136877	0	1.30440956565672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58791692-4	7.26697936481972	0	1.33074000539119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20846392-4	7.38439090416771	0	1.29842664680712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4898801-4	10.5162163809177	-4.21986111903765	1.04456364921565	-4.03983148581351	5.34896193690209e-05	0.00191840431794075	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47382675431779	0.420961122473315
Merged-chr16-14367025-3	7.6844053778996	0.304676784569919	0.793523885023832	0.38395414469568	0.701012434574278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58197430076173	1.74374772464511
Merged-chr11-94689140-4	4.6180462033941	0	1.30458254744902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117949858-4	7.426635440315	0	1.31780698878485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157048117-13	40.0903863798048	0.247284669535104	0.285296176924325	0.86676475023602	0.38607091961895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.748834221593	5.01009634164123
Merged-chr4-134478163-3	6.59786409563136	4.27257584524222	1.01153218867119	4.22386543215686	2.40147473796861e-05	0.00101966710998893	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.31480678761111
Merged-chr9-54555243-4	7.28833217053622	0	1.290551371247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17183479-4	8.42368566013002	-1.20057014460164	0.657369593454108	-1.82632442473239	0.0678014082453872	0.464510895713765	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35432782361044	1.6950503635711
Merged-chr6-125148632-12	45.2110907530625	0.224953177698809	0.283014272715075	0.794847466669222	0.426702235865903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20751182976834	5.36462595846232
Merged-chr6-37601288-3	7.58017331966575	0	1.3275941404898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91425659-6	14.8089356847881	-0.612186914297247	0.456283585612331	-1.34168077397677	0.179699523463222	0.943184342186965	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46098434371435	3.14628950319902
Merged-chr13-109260482-2	9.26287268399417	0.819930233657567	0.750622075176404	1.0923342928129	0.274686192465043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36734018327684	1.54028618764495
Merged-chr10-41576021-4	5.67119812893911	0	1.30460682661316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103039966-1	3.9543873311826	0.840444973158795	1.28893410808317	0.652046499420094	0.514371175879207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.469435083901436
Merged-chr5-146761047-1	5.1503186736557	0.267178989319651	0.685295540669136	0.389874110458637	0.696629638910199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14356566803744	2.21043983090998
Merged-chr1-176827102-1	3.20794125266412	0	1.33697095077063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81135062-8	30.9076653797565	0.39554601973112	0.369898440500915	1.06933681362774	0.284917927993034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55331537584442	3.93385738394914
Merged-chr10-43833069-2	4.72796939969886	0	1.31375270853663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120528180-4	10.595356562521	-2.07854542517054	0.580274494524485	-3.58200376681012	0.00034096887520337	0.00825526199297497	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07287384390816	1.51541939634152
Merged-chr10-127555943-4	7.04661041572679	0	1.30731358288144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26066669-7	23.3295110356533	0.543554527945998	0.342620870127567	1.58646064889047	0.112634851935949	0.678085106184708	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72405403417703	5.3116340320494
Merged-chr2-169790850-2	6.92068741781731	-3.68750443572382	1.09155079904552	-3.37822521768871	0.000729553034887179	0.014800798701564	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50693592849832	0
Merged-chr11-74523755-4	4.91513971990307	0	1.30624653967995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191138594-4	7.94811675179348	0	1.31757019091576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154692740-2	6.47172125001489	-2.45125717707512	1.33950959259135	-1.82996612389541	0.0672550045757244	0.461643437920724	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50075011225879	0
Merged-chr6-91488665-2	3.34396022005012	0	1.34719930443297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64810661-2	4.12172053910556	2.49765290386269	1.24232140338666	2.01047240839118	0.0443812136167858	0.340751355305192	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr14-7977668-2	3.69001100244061	0	1.33679933143768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50121284-4	8.22458471568846	-0.859915129476152	1.09226317021974	-0.787278334490717	0.431118949593494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15452458292669	0.563523181795778
Merged-chr2-69109477-3	5.37908972552131	0	1.33112195799821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40747509-4	16.0932127571195	-2.03765964643733	0.492142709571706	-4.14038368710294	3.46725383901018e-05	0.00136324409966281	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28145601460685	3.2374388646987
Merged-chr12-108907005-1	3.3184899686419	0	1.39277099849068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56339279-4	5.86825771636759	0	1.30794841146868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-72261044-1	4.39453135207061	0	1.33668297904521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52505875-2	5.93552680447028	0	1.30967410630684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109193924-8	21.7928850778093	0.22439064385456	0.389454057208017	0.576167174796455	0.564502190109759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89996500932519	4.06168414350596
Merged-chr7-98085585-5	14.7699545970785	0.132093111128835	0.46417766154394	0.284574468080755	0.775970174310073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38476296403304	3.49336892419824
Merged-chr9-116060886-4	5.17744258762582	0	1.31585972798412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31237471-6	20.5861326747451	-2.30793615933736	0.431241290079408	-5.35184411240487	8.70623862525522e-08	1.10255401008901e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.1006995426752	3.17358968702343
Merged-chr10-117825058-3	5.03430108799617	0	1.30514307485057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31353655-3	6.51296435422443	0	1.32949949805213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45080050-4	7.62687182628442	0.418326630286471	0.684771329803788	0.610899744307836	0.541265954130326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69756344522831	1.85111348754977
Merged-chr2-92455892-4	6.41358491682905	0	1.29758550313329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13360853-4	7.08099582647641	2.27774719266643	1.05687479185293	2.15517222117963	0.0311483598379029	0.264030068598697	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	1.24302299519605
Merged-chr1-131046716-5	13.2760655402337	-0.929470421977342	0.562171647920976	-1.65335698698913	0.0982582313627504	0.612436320739249	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7105417204124	2.69934358707113
Merged-chr1-154126733-2	2.93208746627648	0	1.37255135416756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64242844-1	2.8449464171761	0	1.3643134262144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140841562-1	1.74230787937873	0	1.42131983878237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32470632-2	4.08216861753054	0	1.40955321900412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154981812-2	10.6302462518406	-0.267403969265455	0.553336760046909	-0.48325719267736	0.628913130820253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02172667621304	2.40445353918784
Merged-chr16-57593894-1	2.95747742496795	0	1.3659430730886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35041685-1	7.73592647872415	2.23579485248507	0.677484673054473	3.30014086134949	0.000966363110771942	0.0185674695197011	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52552279650077	3.70552459427422
Merged-chr18-6166073-1	5.20730719098992	-3.3438743841901	0.996356869531125	-3.35610109835815	0.000790496660661755	0.0158162262056347	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44299320550807	0.844015785373878
Merged-chr15-58622639-2	3.29128271935847	0	1.3838193531579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94496751-2	3.66006191004678	1.94424859613588	1.29499450181407	1.50135664160143	0.13326334204726	0.763276917295141	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr1-133136085-1	2.34405028761885	0	1.46422823531363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25376976-1	2.03224893473215	0	1.48121518465041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56598725-1	2.14771733018437	0	1.42312916880755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59734595-1	1.83821330159031	0	1.49916932635826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27383662-1	3.01104747870233	0	1.33080194735917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75172523-1	2.79218307997889	0	1.33129790707726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-47880277-1	1.71388058592254	0	1.55107511833938	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31418914-1	1.61404722564	0	1.66056691786434	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76614544-4	5.32657218697769	0	1.31446696671223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39636740-1	3.40029021093315	0	1.3230481233098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22590436-2	3.00649569647482	0	2.03341715842472	0	NA	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45247851-3	5.6074056128143	0	1.32771770100749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9144336-3	5.36095125320455	0	1.33219726800172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59907978-2	4.13358979315529	0	1.32315683881696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53494683-2	5.66322635106199	0	1.29519454535575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86228406-2	5.52383789055084	0	1.30022518551415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-88437180-1	2.47926490745957	0	1.3575117221695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66091495-1	2.14005811065501	0	1.53222507063399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88505274-1	2.17443804616083	0	1.49382569721171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101544290-1	3.54286336152596	0	1.3250665171954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3722668-2	2.93744195937328	0	1.37917015125549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22918739-1	2.44831977092553	-0.825382792358177	1.44292222487307	-0.572021678043515	0.567307288422268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0
Merged-chr5-3508655-1	2.69444482162811	0	1.39895239796671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163787902-4	4.96471613992945	0	1.31150123544583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155293620-2	3.11175444373935	0	1.34445401173713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121922319-3	8.87602554791193	-0.167031683996185	0.720271933817295	-0.23190086431794	0.816615013198362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08495539029162	3.10901284649434
Merged-chr8-68954125-5	15.0101348383952	0.891705869157505	0.500059111383883	1.78320092336637	0.0745536022292317	0.499004372761587	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3357029209786	4.10199903093896
Merged-chr15-35757584-3	15.4841675742729	0.595922636131238	0.489631032475336	1.21708510410082	0.223571837586795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61264178684994	3.70612360197456
Merged-chr16-58690622-4	9.67090857503751	0	1.30204037462208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77861958-4	13.875635587195	0	1.30659532398775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-89746883-4	10.9377515806212	3.90176594592126	1.04347513674598	3.73920355983633	0.0001846041992098	0.00513107018356598	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.5268023559189
Merged-chr16-85122172-8	21.548962357133	1.51848260177425	0.397782591750268	3.81736816358109	0.00013488282024079	0.00402100947602859	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4755336401282	4.28468559366106
Merged-chr1-151002164-4	8.47314886339574	0	1.31288717766911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45056493-4	6.48137057786872	0	1.3035380726459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39635037-3	6.51662132120192	0	1.29990388399866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41048977-3	10.6962252451071	0.15481349704666	0.592658347242829	0.261218791175194	0.793923787797532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7060771871978	2.95941903017561
Merged-chr7-118652911-2	6.31754775356087	-1.2471659357794	0.871077779254383	-1.43175037348207	0.152215274414153	0.838107458869839	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12961164504669	1.08974267817771
Merged-chrX-142540455-3	5.19698829559585	0	1.32818938825746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47327526-2	9.76276756180874	-2.27398925744774	0.65154661196464	-3.49014056045948	0.000482766554221963	0.0107083717760314	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32774520858254	1.64143129445672
Merged-chr11-89069481-3	10.690091775549	0.817253040929382	0.480916319964804	1.69936641158111	0.0892501665273136	0.568808145558127	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46584119103843	4.33475492941006
Merged-chr10-121498901-11	33.2189024550083	1.08066756886446	0.351610515191221	3.07347909739486	0.00211578509304592	0.0338370270901074	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6441042246321	4.6479297355928
Merged-chr7-68282778-4	6.71278290348472	0	1.30526865126086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113523156-3	4.57243398344658	0	1.31849185957094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53013347-3	4.64807386835017	0	1.31460030831026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101805844-4	6.32674123605052	0	1.32358596777039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105651970-7	29.8627697711022	-0.63171971029288	0.255242069327351	-2.47498271722085	0.0133242623473439	0.137417575442477	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.11556466476842	5.44828589261493
Merged-chr15-34031589-1	6.83162579979662	1.54381438146881	1.06254238162752	1.45294381491316	0.146239354401263	0.814052036178973	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.531725110705892	1.42690496303314
Merged-chr11-53803266-4	8.66129825520075	0	1.28836349196179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22006098-1	3.01025951325552	0	1.3460473447034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-19963188-4	5.6381856034001	0	1.32371452242571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44163288-3	4.5424798050172	0	1.30794733267562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159071895-3	6.23113219546589	0	1.30080827566765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170169321-1	4.89211195541258	0	1.31250011142102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74807511-2	6.02423827357392	1.49472074406611	0.945477443843967	1.58091634422194	0.113897166721448	0.68325752837416	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02130086876397	2.32821868412348
Merged-chr12-35269198-5	15.0064731999914	-1.97638595460758	0.611798155115569	-3.23045425698324	0.0012359367957677	0.0223659722670275	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06911278875712	1.5122114716189
Merged-chr11-104544744-6	13.0325816733343	-0.526018343505339	0.494347469922749	-1.06406601734513	0.287298794024909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85884960824229	3.33773048058368
Merged-chr14-68593596-4	6.93303169831835	0	1.29790474988135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28593012-2	6.44929680455386	0	1.31264771182361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93356282-4	13.8548482438907	-0.201936234543704	0.386017092928935	-0.523127701448391	0.600885389358873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55412866977013	4.47894895176984
Merged-chr6-89340855-3	5.02993424073848	0	1.34213863635234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127564000-1	5.22884273471235	0.34835318662291	0.672109962269866	0.518297906858043	0.604250433112633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19080416861004	2.08628700317133
Merged-chr6-55416117-1	3.05925826963563	0	1.55825576830978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84196453-3	6.62396792639751	0	1.31384114308019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92437335-1	3.16872771361294	0	1.38168179597052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81041831-2	3.78665174685658	0	1.3909699902808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98804257-3	4.48790592802924	0	1.31738307880744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153164702-5	12.0556758285288	0	1.28630636637216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106760274-1	5.12552555313288	1.91594360516478	0.824073483781835	2.32496693907944	0.0200737280901466	0.18779466206937	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12393939043555	2.31711242604998
Merged-chr11-118494701-1	3.61856509380081	0	1.33187994529301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-26438088-2	4.41062465335052	0	1.33236839005852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105254516-7	17.7851643807075	-0.256828563952053	0.392157606812827	-0.654911595466346	0.512524674149128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45683340922219	4.17766001640466
Merged-chr9-3027767-3	6.53659672454693	0	1.35973120202323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46298831-4	6.2846784855799	0	1.3090280127464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87690975-3	5.26103580333043	0	1.3103836303285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6580258-2	5.2948075752573	0	1.31530622966253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44504744-2	9.77796191282292	0.0106756056455045	0.567902890723822	0.0187982942504447	0.985002014574359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92056936592689	3.86433660111735
Merged-chr11-93987171-2	6.91170364870713	-2.72723367177025	1.05007220531059	-2.5971868010387	0.00939907931036715	0.105694757634702	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12080762189472	0.382164212378408
Merged-chr12-33041599-3	6.88012280070308	-0.458892043115467	0.758461927886154	-0.605029766483345	0.545159218699257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31071049269944	0.961371261847668
Merged-chr9-14832278-4	5.89064746397748	0	1.31293998716395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69571177-3	4.78591966416804	0	1.30757746235016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121744145-3	5.20146698525725	0	1.30825056311248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30393330-10	29.8979092407474	1.02036719692084	0.292271413487058	3.49116317859127	0.000480922428482662	0.0106819704322325	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18600322549986	5.0312957512269
Merged-chr3-88477934-3	5.14792072604418	0	1.30764291633157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17675559-4	8.98355577741341	0	1.28549193086068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11012183-2	5.26527399007195	0	1.31546070961223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86787973-1	4.26309248952683	0.264652772836984	0.723260706167642	0.365916149709425	0.714427645134596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19739118417801	2.13938900109644
Merged-chr19-26666549-4	7.24180446214416	0	1.30624987384246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12299869-2	2.94445752968026	0	1.34939788390015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101119734-3	4.37068042079354	0	1.32124359280044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25142811-2	5.44951951242028	-2.59573706622208	0.867163178317653	-2.9933663364927	0.00275918338528463	0.0416304773712329	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25532331529803	0.733321818366247
Merged-chr12-85388795-1	3.48782348490693	0	1.32279675279464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20806863-4	4.53632653528874	0	1.32051072187275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120332847-4	7.45992672351877	0	1.31309824090495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27207454-2	3.3325718186063	0	1.41875833471034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95232610-3	7.83090349068923	1.06850655832334	0.538465963475859	1.98435301541811	0.0472164999167992	0.355748807052135	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38910789661042	4.38405467869391
Merged-chr14-104039055-1	3.83307205773767	0	1.33404838533488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8712410-3	4.45055288777772	0	1.33078929492652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106510320-2	3.84779164319519	0	1.39561299046196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63079523-2	4.36601991951887	0	1.30372881291411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192536606-3	10.0555007634671	-0.412525551986648	0.530861587249133	-0.777086837501862	0.437107539116926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52083623465066	2.59016101190973
Merged-chrX-36101057-3	6.96181010951736	0	1.30004131846111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110260132-4	5.5889096212601	0	1.3139170552051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20470574-3	7.27970419890421	-1.55852955631982	1.15315464820862	-1.35153559736409	0.17652392484712	0.931228900707184	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.804694039803978	0
Merged-chr11-54648768-2	3.97372161275227	0	1.32460167900425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95830548-2	9.48214868844346	1.38650620186988	0.57984135843133	2.39118197022175	0.0167942267881071	0.163516948962462	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27244541104444	3.7226738954285
Merged-chr4-7154437-2	3.71571768762836	0	1.37470956726148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46610552-2	11.6395779996492	0.925314046365924	0.722597097239173	1.28053939034805	0.200355500576328	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52662285778864	2.63228283149594
Merged-chr18-9494517-4	11.2728446299001	0	1.31458963610448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154062034-3	5.48132661271526	0	1.32193459779149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167367546-3	4.88953894914805	0	1.37186273114773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103985289-3	4.41985665038586	0	1.41179874110026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6761010-3	5.32251966592343	0	1.34637910437955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90741178-1	1.88226563586967	0	1.5071243592965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25131018-3	4.65883883320216	0	1.34510439337316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31412038-1	2.19134463588399	0	1.43920364015399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173452361-1	8.53089257504531	0.260705260275984	0.523581004275016	0.497927270369508	0.618535305409719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92978911628709	3.23390106434252
Merged-chr3-55667298-1	2.53272323849397	0	1.38528106833156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45054669-3	4.51003069005898	0	1.33617970796042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155912084-3	7.15777499143583	1.64151018912148	0.656331390948703	2.50103867003639	0.0123829656515501	0.130407296287863	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96438131738751	4.15179372168441
Merged-chr11-121685886-3	5.16069429335722	0	1.34952697904671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55689725-4	7.51291283712503	0	1.30775790761204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146796049-8	22.5759320925162	0.19142802665868	0.449871785350713	0.425516853672977	0.670459938212909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78087701272143	4.31613769901214
Merged-chr2-9989850-4	6.09746844799069	0	1.30808817779408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-141018475-3	3.80725668320245	0	1.30974902874698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128632759-5	14.8840953964284	1.54650791624681	0.557723313400967	2.77289451433595	0.00555601275527888	0.0706486105285958	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52950354024428	4.07924212730528
Merged-chr6-137018599-2	13.5113611251934	0.040415035092346	0.720720845009855	0.0560758515202837	0.955281381356434	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86192092830842	3.26097521563779
Merged-chr4-106881290-4	11.1720532104591	-0.855108124192597	0.592893344477756	-1.44226298398713	0.149228198388714	0.826535501941764	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91012005787061	2.21307952544685
Merged-chr19-32989631-1	3.49025178202366	0	1.31650722078098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76262670-2	4.08014853687542	2.83448878227898	1.04436332253746	2.71408304094028	0.00664595044408807	0.0809782356366547	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.25838937565246
Merged-chr9-114770438-2	5.90270745987296	0	1.30885214712727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4974784-2	6.03912001723544	0	1.31202104809671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64038126-3	4.76021397133913	0	1.315250718556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26980810-1	4.01399449166729	0	1.3482800406799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32734120-1	4.18416503862631	0	1.39844280633727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-45655-1	2.23241215693508	0	2.4332526363277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67305611-2	8.73904386090207	0.00989762156303126	0.584453550121785	0.0169348300835351	0.986488606358266	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70926223292174	2.23923293276716
Merged-chr3-139049076-7	14.0039987979547	0.275505016944657	0.52314303516486	0.526634205992699	0.598447633336109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63491913287745	4.08151531857281
Merged-chr1-191402997-1	5.24669861957122	-2.0487554843533	0.777775421959953	-2.63412217268392	0.00843551290181633	0.0971037333543783	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72315407317905	1.29915063860089
Merged-chr1-135540483-3	5.49228810128145	0	1.2998631966763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116099196-7	24.6575285570112	1.38568489759571	0.396670666846257	3.49328804323407	0.000477111570802826	0.0106189825291831	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74666575506693	5.06671366330387
Merged-chr12-24592533-6	11.3069302668062	-1.52077465516599	0.602039513080395	-2.52603794622184	0.0115357020579615	0.123677110201731	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56393459340076	1.85297260998396
Merged-chr13-115148688-4	8.07485901240494	0	1.30141524599003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50299197-4	7.14011166664571	0	1.29485662756532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34180698-6	13.882638330607	-0.799435273067014	0.51018676670837	-1.56694631306261	0.117127241053324	0.697829749623498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88399682538358	3.09703810615165
Merged-chr11-106973571-2	9.58820869958359	0.424498049250425	0.651765435509263	0.65130494212038	0.514849658765845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58997062076484	2.46207180086097
Merged-chr3-97265173-3	3.39930568943817	0	1.38393639076378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141994768-1	1.67527604758318	0	1.45710136417171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67308480-1	7.64999460684502	2.67082972981739	0.676144311476782	3.95008829399743	7.81223691003967e-05	0.00260828857545564	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10078246100783	4.44314240804869
Merged-chr7-29263832-1	2.41042263195402	0	1.4076886222992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57743526-4	5.99989973861401	0	1.29725519981715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12690891-1	3.78863122768338	-0.684506950855123	0.792258946938936	-0.863993967502499	0.387591204448566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3001900379411	1.97898450809916
Merged-chr10-18953910-1	2.94479088972991	0	1.36680117521975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145998266-1	3.71187335912736	0	1.31968479571362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45607590-4	7.73276551498294	-1.27272455564586	0.870903863644687	-1.46138352207967	0.143910220191077	0.803903231382672	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0357020089535	1.00443616959195
Merged-chr2-165404846-1	2.1916917323015	0	1.34412239227955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38399625-1	2.88195621314023	0	1.33881539177568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116016556-3	4.2925317831984	0	1.32453142040821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15878423-1	2.12632445038013	0	1.41471590524974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143036621-2	4.01043878666325	2.48989857224303	1.21737782451409	2.04529647419596	0.0408256381114407	0.320982390801455	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr3-15073578-1	1.39347694608906	0	1.48181532033014	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-4836472-2	2.21627675682069	0	2.04470768741975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95170319-5	16.8564918967871	1.88079428592215	0.528110547276949	3.56136474762705	0.000368932143041295	0.00870962421213023	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51159703898368	4.21399637462344
Merged-chr10-22002214-1	2.12776714536629	0	1.41742516919217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27596627-1	2.28803296792988	0	1.35324566907589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142683546-1	1.89122107960242	0	1.41441509473151	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63942304-1	3.57124840299745	-0.717641395995045	0.850693555530142	-0.843595665360154	0.398895387322983	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64606312082794	1.41926493179619
Merged-chr12-104142611-1	3.4151565411612	-1.99595845011322	1.21304035793191	-1.6454180086111	0.0998836382975231	0.620377932533974	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04790655584953	0
Merged-chr10-89386652-2	2.00137562329481	0	1.55986674567637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25855277-1	2.5590159785701	0	1.41402749592944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30256400-1	1.41257325093409	0	1.66213177316389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66685052-12	39.4031139359761	0.977708083777278	0.244705039698009	3.99545544703072	6.45699997816796e-05	0.00224316385206467	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83609137191402	5.82843303672965
Merged-chr6-136967539-8	29.4569454067146	0.32602740359089	0.284126766722599	1.14747162807508	0.251186752544791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25358899972891	5.55651785399062
Merged-chr16-89718695-3	5.53948721925342	0	1.29767365623745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37692602-4	5.2706837648161	-0.912766401118134	0.776034566946023	-1.1761929687104	0.239517773594426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7665539986323	1.49176722630688
Merged-chr8-115611647-3	5.1815080597671	0	1.30291488389849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43806538-3	6.40067473822014	0	1.30361245042349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32259268-4	6.76912710702145	0	1.3110704368929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78448401-4	5.6558353982525	0	1.31398318756817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56758664-4	4.95968236629319	0	1.34206205213674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156684120-4	14.6453682240079	0.290315272260322	0.414681771158902	0.70009171478405	0.483870029680641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66072274857801	4.91588910426009
Merged-chr1-131747498-2	7.61267468570742	-5.11404161111253	1.08182507940807	-4.72723521432016	2.27597565505183e-06	0.000154440192268969	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59749093896427	0.420961122473315
Merged-chr5-130454024-2	2.74458607929469	0	1.40742554178316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132564985-2	3.4320423484048	0	1.38244089307645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67899028-5	9.49668088292107	-1.87604837931769	0.677324032384516	-2.76979449955891	0.00560916701737124	0.0711031285969235	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65216529512451	1.54084633208408
Merged-chr3-51511084-4	6.35538881345661	0	1.31149231601068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118480347-7	44.4943639036581	-1.69772615835504	0.354695625154115	-4.7864310635841	1.69773215433185e-06	0.00012354120863805	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.35042310579047	4.43313423361058
Merged-chr11-55449578-3	7.24148852359295	0	1.30587707579591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46889958-1	3.3078411401632	0	1.33947955398606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114830241-4	6.07840448724618	0	1.30486116400443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19669076-4	9.07785711141415	-0.246573313250762	0.634125646091751	-0.388839837610173	0.697394629153464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63013100826533	2.27189710560821
Merged-chr13-55437406-2	4.07817255795152	2.03619581417007	1.15516211170365	1.76269269355369	0.0779523337302371	0.515574210519846	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.15307255889252
Merged-chr13-59975990-1	6.32958281802626	1.58593673988739	0.693053589841802	2.28833204694806	0.022118191604832	0.202800922498386	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57628164730877	3.39184591427084
Merged-chr3-78958990-4	4.7268418784085	3.4307042377208	1.12230636141019	3.05683399442741	0.00223688120813824	0.0352900143474171	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr11-119258669-5	18.7654956158775	-0.384182006874824	0.37657174472014	-1.02020932866416	0.30762919431453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.71162033407033	4.16771004116152
Merged-chr15-101077782-4	6.31208184173545	0	1.32048489508722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8837867-5	10.7704139619856	-0.515920658121304	0.601028098515863	-0.858396902566257	0.390673337366984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81315107224294	1.64143129445672
Merged-chr17-62784110-2	4.36094965360037	0	1.33490669237958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80793947-1	3.01284946778571	0	1.36157012020632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100499085-4	8.77277226838462	-1.16452249527399	0.628274750783268	-1.85352426437985	0.0638072515985834	0.443954773822189	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25317197953504	2.00098049458557
Merged-chr11-54201449-3	3.21152203321883	0	1.38884544982066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-124072769-6	20.1748514097333	-0.741126812398147	0.370573360926859	-1.99994627391586	0.0455060656544753	0.346255166075611	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11063844752409	4.31047709495079
Merged-chr19-9995750-1	5.34713949373839	2.51483520816969	0.88815467482642	2.83152842567787	0.00463261156521329	0.0613792853488295	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14090682889784	3.45024018534946
Merged-chr7-81235285-3	4.39899288387714	0	1.33587023269614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166171418-2	4.20888446779099	0	1.39909542924831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19563330-1	6.02109860135851	-0.642409062625478	0.764383945678812	-0.840427204492091	0.400668901229974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27107658066771	1.78862493009953
Merged-chr6-124316160-1	2.60281011105817	0	1.33602080205242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4918519-2	4.52914723231893	0	1.36066770607834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102290838-2	4.22530301776391	0	1.30309115479339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118104917-7	20.2334311640894	-0.710368606190836	0.474917663056201	-1.49577213367777	0.134713045435943	0.768508645399027	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54973957667957	3.84593468635383
Merged-chr5-123252030-3	5.66317188247587	0	1.33186564436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154103784-2	4.12596652550296	0	1.3500579491816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177282181-2	4.47850629297668	0	1.30723568368593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44923053-3	4.39956846340454	0	1.3158533087417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80180184-4	6.46765809071464	0	1.29641605636528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5890590-2	3.73890793434681	0	1.31798583181616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30596397-2	4.26872979675141	0	1.31712019791043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16047153-2	9.10126245790853	2.57839478476851	0.727431499901849	3.54451901672723	0.000393330129663621	0.00916311966238823	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18559150790334	2.85447654972834
Merged-chr7-133050854-3	5.52832355682491	0	1.30435919373577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160619502-2	4.13159665639748	0	1.3652755129722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5616842-2	3.92553980279903	0	1.36537915640122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55027757-2	3.4542649309379	0	1.37735924240126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60881476-2	3.31262298967395	0	1.36551419214586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5674687-2	2.20105806062954	0	1.6467372894719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36688501-2	2.19581269149361	0	1.60274770713939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81450326-3	5.40538955573149	0	1.35023923929226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21051126-2	4.11479726110823	0	1.34993017534299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85863192-1	2.49245332951535	0	1.37802189570617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120502215-2	4.25179889282171	0	1.32404087432841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72793864-1	2.70542332933642	0	1.34723532656637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53774217-2	3.3217492321475	0	1.40319268668894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90316062-4	5.31992468849313	0	1.34250710188688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25479930-5	13.4689457298011	-0.856624820082628	0.450987285965723	-1.89944339173174	0.0575062028762843	0.411498065391335	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76648932406646	2.88900786427689
Merged-chr2-27593459-3	5.29817762267112	0	1.30028144546606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157011147-1	4.45167120744517	0	1.32018627972218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55498147-4	6.93259491911175	0	1.33149655211109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138127529-2	5.11917716327505	-3.62925697634763	1.03404199524445	-3.50977715899214	0.000448482383697497	0.0101325405913845	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23027823241036	0.683637474991079
Merged-chr11-18864823-2	5.77037425509278	-4.63835183866063	1.11318973146392	-4.16672172546984	3.09011327200066e-05	0.00124186376551481	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93403855590083	0.306240821987646
Merged-chr9-77725734-1	4.0494164082403	3.15781848034447	1.15556477086265	2.73270573832664	0.00628164258617668	0.0776689151251279	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.4217268527323
Merged-chr12-85228602-1	3.33730003641311	0	1.32323319066749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125428617-3	5.73752076329165	0	1.30867065558928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34437511-4	10.3395215704034	-0.927062125409351	0.763292309363871	-1.21455714152546	0.224535043510403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52278084175711	0.900948542443349
Merged-chr5-143511782-3	5.02850185086835	0	1.31528567327843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80949451-5	17.7510555927658	-0.616027190532854	0.378487456053628	-1.6276026607486	0.103609164585084	0.638296039027593	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69475869541565	4.01126118305717
Merged-chr8-31121142-6	16.9385674810425	0.426120885165696	0.452128769732783	0.942476820082787	0.345948573278436	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97318432664965	4.53525852541317
Merged-chr5-53547054-5	14.7494496803024	-0.113311557923996	0.524733645429006	-0.215941094898453	0.829033663613969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44739532782492	3.08299119290449
Merged-chr11-23211269-5	11.77944563865	-0.451468790574768	0.528339462862693	-0.854505147369803	0.392825158588353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83950505085296	2.78594721558773
Merged-chr17-65680308-4	7.19847834801287	0	1.32468238400257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149203633-4	8.41210336868757	-5.5868084335971	1.0391336388499	-5.37640994836866	7.59856756851424e-08	9.79360939511108e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35189776870504	0
Merged-chr4-33251915-1	3.51484370959927	0	1.3235027174349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80191854-1	1.98882125696577	0	1.40356253791689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114500349-2	9.66908513624667	-0.322291261041272	0.59387147130704	-0.542695308013276	0.587339605275584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53529579105022	4.13160024164044
Merged-chr18-24223716-4	6.41751892494963	0	1.30067805578114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45608610-4	7.00200893603925	0	1.30335637551705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101762646-3	7.64287127176068	-1.45520162410242	1.01953900814459	-1.42731333718234	0.153489597971026	0.84327882021728	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70070757851002	0.469435083901436
Merged-chr1-133118346-6	27.2373657993211	-1.45808882654037	0.411422550518473	-3.5440177615517	0.000394078696238319	0.00917728670149294	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.13249271470657	3.86154170239012
Merged-chr9-22322483-1	4.66736425888135	0	1.31227034121118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80335278-3	5.02598196772597	0	1.33279496444681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183510952-8	22.2242048505981	0.294396459881281	0.300774397134726	0.978794946264699	0.327681307284032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90975995282615	5.23777187793732
Merged-chrX-74250581-3	7.09038761848726	-2.498740063046	1.07665974406117	-2.32082612620097	0.0202962298547117	0.189387039281164	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56112643913988	0
Merged-chr5-52416678-4	12.1046064463551	-3.22566515067741	0.697146029944126	-4.62695764176687	3.71076369755741e-06	0.000228617816236824	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81310042098131	1.41959898789419
Merged-chr7-90069983-3	6.40019136469672	1.50299377625192	0.804745465832389	1.86766355334143	0.0618089818496212	0.433272873626405	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6060607779139	2.32821868412348
Merged-chr1-91956458-3	7.96544094806957	-4.0326524363858	0.863189391325079	-4.67180490969113	2.98564473474959e-06	0.000192406253290875	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57925084876616	0.683637474991079
Merged-chr12-55652970-2	5.00766451390408	0	1.33879818888295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33947663-12	34.5326753559397	1.48208235203723	0.341466424048791	4.34034577825859	1.42258682337537e-05	0.000670792788501651	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15550977006013	5.57060308162425
Merged-chr4-102720166-4	8.18476567835693	0	1.30389390885266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48429293-3	5.43121063922449	0	1.30554334330015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21384036-6	13.9842789511729	-0.26512454743986	0.622260274513779	-0.426066966346233	0.670059050095497	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9214246761246	2.61001478900548
Merged-chr11-106818546-4	6.33490871238334	0	1.3010625324789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116652381-1	5.30361149573176	-3.17846027779012	1.03207570054722	-3.07967746562083	0.00207224872722585	0.0332710479924571	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93186162480625	0.733321818366247
Merged-chr10-43021756-2	5.20560461236585	0	1.29602447970686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58559797-2	3.96150321764864	0	1.36151810876131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41525464-4	6.16650345769093	0	1.30203457054936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70911214-4	6.45430732755209	0	1.29793163075482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41575367-4	12.2363415955205	-1.05252071901073	0.555144323788421	-1.89594070210087	0.0579678860307534	0.413895266670194	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28818406095483	3.27617804945878
Merged-chr1-176847281-2	10.1163387466887	-2.1247825773225	0.542328526209408	-3.9178882810639	8.93280866644108e-05	0.00289258332565539	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3629662618736	2.09282686802642
Merged-chr1-191178884-4	5.69343819729083	0	1.30589275803829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155683905-4	10.228679234037	0	1.29722641025006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90822523-6	18.6075819464863	1.085815534654	0.379028810316931	2.86473087295417	0.00417363787262538	0.0567243220517009	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78443158149762	4.90095260791118
Merged-chr7-66119018-3	5.6662948492662	0	1.33813185638653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118843240-1	2.18347377583863	0	1.40581950097639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65396981-2	5.96231740968093	0.472426361908231	0.737642203423974	0.640454626532119	0.521877078530821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79545565523336	2.05529040810265
Merged-chr8-125829083-2	4.92621839140388	0	1.33385714657437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54921768-1	2.10133877604873	0	1.38970372507416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55429141-1	1.40357496522404	0	1.60221988601603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140534528-1	2.2573900644038	0	1.3795704657349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69629672-1	3.3927633760717	0.206301821036559	1.37639478697641	0.149885645447518	0.88085483704781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.382164212378408
Merged-chr18-65534184-1	5.26775479668274	0.893021388596769	0.748986760855135	1.19230597290824	0.233141293368447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31492699259138	2.45362829364608
Merged-chr4-130798535-1	1.57380961161623	0	1.46271248074758	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118696313-1	2.24545256296809	0	1.44570145839184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85274348-2	2.32793755876025	0	1.45153270670677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29704723-1	2.18534115844803	0	1.43232333814894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32255125-1	3.45206936950062	0	1.34602995114245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43402338-1	6.94777660462338	0.343680352573417	0.738656033536894	0.465277933123728	0.64173243525759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82588981437505	2.5707100905608
Merged-chr1-136600855-2	3.08119171661924	0	1.39654040903237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-60387110-1	2.6389427133511	1.94511780538409	1.36192373713096	1.42821345450789	0.153230429156813	0.842348416226223	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.805218875278971
Merged-chrX-71274386-2	4.43581379480911	0	1.32255809485422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38672461-1	3.23753466210049	0	1.34015453878398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89680734-3	6.86011595691861	0	1.3092037158457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132237777-1	2.55231144283602	0	1.36629876852034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111049942-2	5.03211193310142	0	1.32213437009126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63079973-1	7.95661641946579	0	1.28976440209557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75727613-2	7.44699545901447	0	1.30475322936496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106887961-4	6.07993880172466	0	1.29411671403858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62722258-4	6.99753489234014	0	1.29300479000554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99182816-5	13.3744888300973	1.67480014745778	0.532756581673146	3.14364984886343	0.00166854962056539	0.0281593604094696	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41719875562047	4.27894720463983
Merged-chr14-64050634-2	5.3861741185357	0	1.30952589450892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127331731-3	8.71868699166229	0.0666744928485563	0.9306910918843	0.0716397668678287	0.942888591979308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913544961417945	1.03956264035389
Merged-chr10-84109877-3	6.31200256271341	0	1.29547636538638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57347939-4	7.7631381099686	0	1.28875506342576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33563332-3	9.12286905827579	0.534911372213118	0.595348233194989	0.898484857076788	0.368927114758061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44190781046796	2.83031286297958
Merged-chr10-119129708-2	6.14929062654531	-2.00923259304403	0.822372769095108	-2.44321391533292	0.0145571059124495	0.146409597364693	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23636280779001	1.13404870833161
Merged-chr9-15126187-1	2.14838985047482	0	1.35627013135362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83397488-1	3.15105884433047	0	1.34463833853534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27680705-2	3.64823761936635	0	1.33690887782951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90670298-6	16.7415171974509	-0.288791849892536	0.450819061845864	-0.640593697857599	0.521786695188851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73805014272004	4.51437717062498
Merged-chr6-116133939-2	5.05535047062768	0	1.30906262482744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-7420055-5	13.3202736461279	1.62127237278728	0.662664196477926	2.44659720776281	0.0144211903233073	0.145561801493179	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25151544441003	2.49991195549289
Merged-chr11-63955187-1	4.79005215098745	0.774744647360839	0.947837565275051	0.81738124309941	0.413710591364739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0299196168836	3.57694184525732
Merged-chr6-121077418-6	27.140508802053	1.18723618029379	0.365068855009061	3.25208837731261	0.00114560395040931	0.021111290395783	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89545692770279	6.10316564248154
Merged-chr8-94794990-1	5.1025039743087	0.317120229359596	0.800800452237763	0.396004058780727	0.692102034006271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78360244886033	1.95040317292908
Merged-chr10-99332816-3	6.37794366330159	0	1.31160745162022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50532141-4	4.86192009083795	0	1.31397360599371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94904791-3	4.48868798728137	0	1.32249062444909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84562412-3	4.94810752303679	1.30293632561294	1.32647527789136	0.982254511131302	0.325974478602625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr19-4629003-6	24.4265623349385	-1.03356147934779	0.388048526783426	-2.66348512624204	0.00773358307077936	0.0905174134592778	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50506507425826	4.56937777545426
Merged-chr3-54102396-3	6.44163530190654	0	1.31908808193471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19764071-2	5.0768677163674	0	1.33088202535026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32077380-3	5.68674750365476	0	1.31595307241477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20454862-1	2.41148248468359	0	1.40331458805031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4601751-3	8.33909059258056	0	1.28999858800901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68935260-1	1.87175556398385	0	1.65641039505421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62556381-1	4.09952333066791	0	1.31931392222188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43391891-2	7.29284381866221	0	1.30869311715871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56742225-2	2.96421797896317	0	1.36829971760019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85762573-4	10.6003797587478	-0.0140057867969629	0.700864113720076	-0.0199835981366237	0.984056456744801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0635255346453	1.8133278414847
Merged-chr17-65786464-7	21.1088434820878	-0.819343731511241	0.371547702268948	-2.20521813621163	0.0274387911277996	0.239260107424232	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61705693250497	3.98822287600513
Merged-chr18-9503766-4	16.1683760068013	-4.66697472213722	0.923496667324516	-5.05359129844835	4.3357890774015e-07	4.16656578017468e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79016556253988	0.61242769162773
Merged-chr15-62210778-4	5.66042573843164	0	1.30788351304922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19813721-4	6.58835818040112	0	1.32712603123004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115556329-2	9.58141367007924	1.27662479013249	0.736607408272464	1.73311424212594	0.0830753654557832	0.539626523963579	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18323621614592	2.69348176078283
Merged-chr14-48459576-7	17.114478714456	-0.122776400766287	0.352624301960297	-0.348179067874089	0.727705706867861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72817296799023	4.79292574857648
Merged-chr5-64718305-5	11.633276859815	-0.462275415690877	0.515064996164084	-0.89750889525331	0.369447428986865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70984607611455	2.83660406472211
Merged-chr14-67211900-4	5.54143534514534	0	1.30969900049746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146913193-4	12.7275119756546	-0.240627036926578	0.458272552274012	-0.525074075967573	0.599531696805517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61436614484607	2.89848356687922
Merged-chrX-155606212-1	1.84829390491839	2.75566498058439	1.26015813018428	2.18676126001855	0.028759956913514	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.00443616959195
Merged-chr11-79121693-4	5.90352483266456	0	1.29610275836036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124275646-1	3.09922497449064	0	1.42552405652399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53857803-4	9.51035835375301	0.85199201486132	0.58681240072033	1.45189844968422	0.14652984369756	0.815321795492232	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40622837558401	3.91052104168672
Merged-chr8-26685265-2	7.97721143053377	1.06693826627735	0.694437602667561	1.53640624035752	0.124438777210953	0.72811392690069	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64072136006974	2.58467461800438
Merged-chr7-129330649-1	3.60096880348551	0	1.37605688315083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5610171-1	1.90784201568365	0	1.37011013259945	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12154300-4	5.72070935788839	0	1.30450612985778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32996022-2	5.5762808651587	0.421836245837468	0.882790921613494	0.477843887504495	0.63276132171936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06206397615059	1.73830414206781
Merged-chr5-62933802-3	8.40606036963251	3.08574673365727	1.08290895358658	2.84949784876865	0.00437883018747995	0.0587656134576478	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.51144536133504
Merged-chr5-100628191-6	15.4774551304909	-2.87723717560651	0.702285091373685	-4.09696462440712	4.1860284219902e-05	0.00158850298062353	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13500396024804	1.48219169541115
Merged-chr7-98535419-5	9.91232283692771	-0.515631894052049	0.642903027464939	-0.80203681118949	0.422531664918882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11241128492065	2.19193974227778
Merged-chr4-137883882-8	22.7527663248952	-0.233328486998324	0.379997241876728	-0.61402679094712	0.539197623632555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43816898059535	3.96169358491227
Merged-chr6-5589832-3	6.13461534016931	0	1.32546571419351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114297812-4	4.70293376574988	0	1.32080652207111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135669539-2	3.28119580072281	0	1.32857978467773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33242740-2	6.08549376314209	0	1.32482279974465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65928822-2	6.64602858255235	-1.05941566298589	0.751813830347486	-1.40914628092999	0.158791918271859	0.863301451734973	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98446552536527	2.37097709484259
Merged-chr5-147532115-2	6.21549032649193	1.80602988374169	1.0698580024824	1.68810242064942	0.0913915698762165	0.579187442332211	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	1.84001395625789
Merged-chr18-74882576-4	6.12313852024629	0	1.32173214231245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5320977-4	7.41278756952374	0	1.32073647425609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50097127-4	24.632980358919	2.20466240926196	0.449543179214227	4.90422836159047	9.37953200526398e-07	7.61384966976373e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8884472829902	5.49316389572311
Merged-chr12-110771075-2	3.73399121926606	0	1.33596144158781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51955222-3	3.9391055607175	0	1.34526911146519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36674605-3	5.30648134115831	0	1.33229680993055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13440860-1	1.8287206706458	0	1.44343268092111	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25522081-3	5.27724433350731	0	1.31488424060694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55189867-1	5.22792817705116	0	1.31298104974201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9637854-3	4.2667821829311	0	1.34501280679174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141669340-4	19.2935394613559	2.31487831594055	0.444834817719953	5.20390541326261	1.95143358031517e-07	2.14665936850996e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64742021134582	5.33441205820665
Merged-chr2-27690916-1	5.1045804294013	0	1.33542614579345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26689359-6	9.53595769150506	-0.0841923707370078	0.669123098500507	-0.125824935539785	0.899870502932655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2291770874197	1.99906049126725
Merged-chr4-19537573-6	15.7710894037232	0.273412554950234	0.414304370634948	0.659931621120026	0.509297710947873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44677855819287	3.49234290144955
Merged-chr4-133205103-5	11.4997862854277	1.64065670461372	0.573497623456549	2.86079076444164	0.00422585847467664	0.0571724529785135	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62545188498273	3.39339490832717
Merged-chr9-25175383-2	3.83195634477719	0	1.32336713136425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57335444-4	6.66860049081108	0	1.30163208470809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62043377-2	4.65526657037182	0	1.3239264929761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11475537-4	4.73204792547267	0	1.31239529619011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110907998-2	5.06151785329271	0	1.30464058472743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102395153-4	7.45742055193686	0	1.30962442487593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154916868-3	13.6090166401372	-0.211352746540576	0.653811407073352	-0.323262555920601	0.746496408955148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29896424642609	3.15559996822205
Merged-chr11-94404818-2	5.01251099409521	0	1.31264459665672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70821689-5	13.4803590108683	1.47898193088807	0.54594266192014	2.70904260474228	0.00674776741570339	0.0819065753182596	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33068791995446	3.03059019966468
Merged-chr11-46849346-3	8.88516142075685	0.12682108648754	0.517206999132172	0.245203732162044	0.806298686740979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28961779209821	4.42770398357723
Merged-chr9-111145697-3	6.9578413309623	0	1.30040143967401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90540918-2	7.85990515416351	-0.725748846416093	0.682056109514809	-1.06406032625727	0.287301371975781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25276082147558	2.62758400369243
Merged-chr13-112439653-2	4.71933693187186	0	1.30387211888109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113009318-2	7.4242679029145	-0.819682070483297	0.68155882116016	-1.20265785583704	0.229108748950157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39687357666779	2.68492866054983
Merged-chr5-139288037-2	4.35343861794624	0	1.32154514468665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93567266-7	15.7233073334732	0.580327385358785	0.438351166964504	1.3238869406404	0.185540596031543	0.965902462317928	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28373893033522	4.02053357894545
Merged-chr6-129097604-4	7.07643344684451	0	1.32046592752922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-18924630-5	20.0732573606483	0.0661009382998163	0.40614941697673	0.162750297148902	0.870715043497599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61863558545143	3.78940645076903
Merged-chr15-64047794-4	4.69642711661351	0	1.31323677416062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56626701-6	16.3809731124041	-0.00727269086753298	0.460012545762967	-0.0158097663520691	0.987386156988941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06425999366328	4.23470236370212
Merged-chr16-85147588-2	6.88873899850049	-3.84474080877433	1.10456718379798	-3.48076682448091	0.000499980549881136	0.0109747158255065	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63405811559968	0
Merged-chr16-78264819-1	3.19020913738847	0	1.35372143757995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79160407-1	1.84480729498283	0	1.46234102911696	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-3010342-1	2.53721223420025	0	1.40978204643035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85532366-2	7.02770445198438	0	1.29398071759611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36557531-1	4.67147220123572	0.943602032102408	0.81571096209734	1.15678478768538	0.247360298495355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6391169669863	2.30526401943093
Merged-chr15-38620428-1	3.00630753548632	0	1.35051556128463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104901655-1	2.17862499590688	0	1.39225008963021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57108528-1	2.95007355392582	0	1.35628605563717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54916048-1	2.36533589290528	0	1.4406555284224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32010028-1	2.44798209073216	0	1.39628103322644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93376945-1	4.49220055393926	0.760397026631511	0.602074398944776	1.26296189966592	0.206602872531402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61209380516955	3.17736688716182
Merged-chr4-3954194-1	4.13723814595159	0	1.31713690716302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37184337-1	1.99133053185283	0	1.46963413093022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81335504-1	4.82437074039728	-0.275202839894924	0.953932923253325	-0.288492862743812	0.772969493094876	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65771649384664	1.38601560292234
Merged-chr7-127077090-4	9.89938835607781	0.11083750004935	0.703559153619156	0.157538281577597	0.874820640209849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67254925888021	1.63379099656069
Merged-chr1-54832815-1	3.53881978754736	0	1.38952852493627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33452321-3	4.82427279527482	0	1.43963839266557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36632655-2	7.30389942197961	0.364482638973335	0.685504376150797	0.531699944820128	0.594933830159715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30925488111881	2.88869655420165
Merged-chr10-98508623-1	1.25624687650181	0	1.76593406999628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172463845-1	4.52698925290466	-2.24400262685703	1.17958197551253	-1.9023710716519	0.0571226601672017	0.409430756535318	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.982874146088839	0
Merged-chrX-19175964-1	1.35512809300536	0	2.44128626835773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173812034-1	2.32543028811788	0	1.36264509749694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125580691-1	3.07362085036385	-0.275666147897782	0.930733725430618	-0.296181539752672	0.767091445862912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74128384493687	1.15307255889252
Merged-chr1-133101627-1	2.88383119970765	0	1.3563830661605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73227329-1	1.52983067308445	0	1.54487011033378	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21941710-1	3.16474689851352	0	1.35472535750967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11571352-1	1.19381360026314	0	1.62825128230609	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86099504-1	1.97397696100002	0	1.38422068636917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25547444-1	2.39084548046782	0	1.41247303910788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36653948-1	2.40046598966397	0	1.46254863266099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4907941-2	2.25727085675357	0	1.58162254997916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93841540-1	1.59411607643789	0	1.4500703855952	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86785010-4	9.09316142379681	0	1.29486394818226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70730180-10	31.0817545522598	0.181754185598369	0.313546948773829	0.579671358018777	0.562136261886051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.50615459884961	5.64073867639922
Merged-chr11-69754840-2	5.50840401228059	-0.31384676785059	1.0268219236466	-0.30564868223305	0.759872150042855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961706022068083	0.683637474991079
Merged-chr2-122166298-2	9.70185946815583	4.43664450280332	1.00359690229648	4.42074352028309	9.83618666247432e-06	0.000499809839538139	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.0723749503409
Merged-chr19-47436202-2	8.18034020027238	-0.826055471771815	0.652533505090883	-1.26592039386049	0.205541584197167	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44319529072438	1.81853816206348
Merged-chr3-87498309-4	13.7024744199556	-1.52582016982449	0.495761440749749	-3.0777306268857	0.00208583368125156	0.0334422335171267	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5675223131411	2.54938682242432
Merged-chr4-132946144-4	10.4159331160944	-0.282785575429348	0.569785570331436	-0.496301749559674	0.619681532100574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88871086088131	2.60007272653574
Merged-chr13-100403141-3	11.6553014729065	1.34549713548587	1.15717113908966	1.16274688335588	0.244932213682764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.581381506691384
Merged-chr2-158310930-4	15.1272740070669	0.201554604337715	0.907702777540721	0.22204912150186	0.824275644250445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09593933824148	1.03956264035389
Merged-chr16-91441643-3	4.33034114331778	0	1.3104348015323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155206756-3	11.1873833521481	1.19199555192026	0.839805400165795	1.41937114441624	0.155790840439161	0.851694826347979	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.976661988908764	1.69757189012738
Merged-chr13-101797167-4	7.13904377902607	0	1.30325305332388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85486959-4	6.67015893008524	0	1.2909751391246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-5080184-4	9.24751896507314	0	1.29271021594444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121135848-2	3.0495949522481	0	1.4255286219127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85811403-2	4.58186866762299	0	1.36351362037386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97719208-4	12.385042920374	-0.516048515028292	0.511521434874533	-1.00885022570925	0.313046469280657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45541449222102	3.00825230431687
Merged-chr18-50034150-1	3.23112838128662	0	1.46223619698443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141659649-9	23.7589743688401	-0.410233006813457	0.367877196027168	-1.1151357334559	0.264792260811839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06558218338848	4.70216984428082
Merged-chr17-25678256-4	15.0051054834826	2.94521630987982	0.571620443898396	5.15239848629928	2.57175836247914e-07	2.71492927228694e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35551535268006	4.04525678076987
Merged-chr6-116712272-4	6.68457238813556	0	1.33308670053706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98717661-1	2.56081485541691	0	1.3963741909506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90360150-4	9.96303619347596	2.13501327488725	0.804650476878793	2.6533424589132	0.00796989649669904	0.0927847597493845	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	1.69469308021391
Merged-chr6-85154929-1	3.83039815944526	0	1.31225767563363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-49063032-3	4.82038617580846	0	1.32359569044989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7137124-2	5.56196776534018	0	1.31617504995284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64656929-2	7.39540541005181	-0.745704962751005	0.791854243758981	-0.941719980196226	0.346336022836459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1679334435572	1.35032549026822
Merged-chr7-75709458-4	7.5811125351411	0	1.32672960765926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73971229-1	2.8169458655151	0	1.36345303239405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98103475-1	1.95535877713868	0	1.38781216975188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19614531-3	8.68366395129915	-0.0445207434588104	0.667977822457382	-0.0666500323244651	0.946860314230214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37614148192614	1.75520908275751
Merged-chr4-132007404-3	7.81959906108567	0	1.30286073284061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17733874-1	3.64340309612042	0	1.34628062747072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17591444-3	6.70214889924109	-0.500257029908087	1.02179706132756	-0.489585504638397	0.624427235787039	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35164624102752	0.73596151290311
Merged-chr18-11866341-1	2.56506527352074	0	1.35779880186512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144173950-3	3.62182703432235	0	1.32208190224773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99339349-2	7.81972348229949	-1.08906042300058	0.704254139861338	-1.54640258588328	0.122007370039779	0.718195982579893	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63961801734181	1.71702628909212
Merged-chr10-80087670-2	5.19450755133883	0	1.30952252329226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31004392-2	5.76205649176889	0.349680426584644	1.06764719826016	0.327524323722746	0.743271348884609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656505258713436	0.733321818366247
Merged-chr8-46340973-4	8.43635001355407	0	1.33696932453168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-165015604-2	9.95518542911612	-0.346464708218443	0.48354479561495	-0.716510055242814	0.473676460905065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97231993673765	4.55633904700776
Merged-chr8-128552153-5	19.9181975495583	-1.41818128018386	0.374593350907405	-3.78592219202103	0.000153139590109877	0.00443772046799115	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.00952195215701	4.53060084317467
Merged-chr12-111843148-2	6.75252221854626	0	1.30012340080066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110680888-4	6.24149551973149	0	1.40791927688986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68916342-3	5.12745944149256	0	1.32859769657902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81843162-6	14.4206423892636	0.664437970370837	0.410076089203361	1.62027971848252	0.105172203592556	0.645070660405402	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87966582831482	4.56581751637153
Merged-chr1-180971936-1	2.08064774047581	0	1.37732016484281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33292958-1	2.4020619360905	0	1.34595276967797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33879681-1	2.39801988669889	0	1.39117666176061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45030314-2	2.98692541380062	0	1.48079809658877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17899492-3	11.0429826599079	-0.253199108851271	0.513499171086839	-0.493085720694283	0.621952019911104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46694850290603	3.59017879480329
Merged-chr9-78022396-6	14.87962263462	-0.263324191096339	0.56960029248309	-0.462296446422833	0.643868747618887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08962123695079	2.35686799001988
Merged-chr2-59642857-1	1.92990372742239	0	1.3919532526095	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80040743-1	2.59087116218206	2.12140350396308	1.27179632397928	1.66803714082573	0.0953083540941219	0.597985569528035	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	1.69225642490999
Merged-chr4-59244483-4	17.5073330228512	-0.120349631452876	0.471771219627962	-0.255101681590038	0.798644565404509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61972289643985	3.05299228708348
Merged-chr18-9506427-2	3.73638857371013	0	1.34410533694798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142778879-3	5.52843236743033	0.183770301959048	0.721359615647673	0.254755461731872	0.798911976820373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95611321393109	2.20491078807447
Merged-chr12-25282726-3	4.55622194674117	0	1.30485225787996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47242586-3	5.53262796130608	0	1.31531187464534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32217058-7	23.1659564577438	0.785215793814816	0.324716839486335	2.41815544600932	0.0155994112340097	0.154354804133494	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12515698863078	4.8578139151856
Merged-chr13-64307516-4	12.9644494235918	0.207612905310756	0.591232177590661	0.351152919580261	0.725473628502788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77970813175307	2.43640320282345
Merged-chr8-124746041-2	11.8638956280702	0.607052631303395	0.661562450409436	0.917604424083766	0.358826000892824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31576745892878	5.10336697414027
Merged-chr8-124007755-4	8.82855964034725	3.38317835479639	0.803883438842236	4.20854341727564	2.57022147756118e-05	0.00107524771237332	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17099483890549	3.79061537002619
Merged-chr12-84189261-4	7.78921984563791	0	1.30354248779008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94962000-1	3.27228331609729	0	1.39807854974403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159916865-1	2.48598666037899	-1.21023401196752	1.33240299593879	-0.908309284545555	0.363714838525188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03118561254787	0.469435083901436
Merged-chr5-4877390-1	2.38615783179797	0	1.46806671570629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26069938-1	4.34921831617375	0.632993714799468	0.945178471044948	0.669708138929209	0.503043862305373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4425760743381	1.71491581301229
Merged-chr18-62177151-10	40.4113284104294	0.585880833441301	0.329066231215583	1.78043438634537	0.0750048984386254	0.500998680708414	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28154968474763	4.89440758204156
Merged-chr18-57621463-4	5.57363729189148	0	1.3099115916135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75633099-2	7.31398179851693	-0.0356817154369167	0.489800158191281	-0.0728495384090545	0.941925849699627	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43963273461471	3.42684806903154
Merged-chr9-68957228-4	8.19235637938941	0	1.28892867823128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128393014-7	16.8815331174139	0.792106779212616	0.442961042335216	1.7882086764036	0.0737423469981983	0.494994083918261	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12257680429545	3.8664844837871
Merged-chr9-47616621-1	3.03474324687747	0	1.34484352685569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30944271-2	5.45936481368044	0	1.30620142067589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105795115-2	4.08809756548943	0	1.33697857392401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103680541-3	5.58096199720137	0	1.30689329897348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121923632-3	8.09032793886451	0.82287280991521	0.582112912318806	1.41359655919219	0.15748039213605	0.858203127722651	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75640626133685	3.95647207835154
Merged-chr16-91352200-5	15.0689295294967	2.09440121459067	0.510733228545796	4.10077335393672	4.11771707793752e-05	0.0015680439404132	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43966877353604	4.91812430948303
Merged-chr13-37965541-7	29.7879243719876	1.43266051025126	0.302647406762218	4.73376106399903	2.20397163296335e-06	0.000150807047463479	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77273898155298	5.52361014275085
Merged-chr2-51304889-3	7.18736807399972	0	1.30383296862471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98882676-2	4.33332015699728	0	1.36289870844617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108723474-4	11.205955797723	-0.418186657726226	0.517555277997767	-0.808003850997401	0.419088365247799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95637778266763	3.44657666009352
Merged-chr7-38124309-4	12.8005060055912	-0.324487749386393	0.427383808364896	-0.759242027974418	0.447707789201026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06329472353371	4.69197312385908
Merged-chr5-24780378-2	3.68262852567259	0	1.33410314560122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75203036-2	4.48329183039511	0	1.3236536218733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77848563-6	20.2448401492234	-0.404106774581738	0.319462103533284	-1.26495997525927	0.205885675993806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.15014098554639	4.80786740261806
Merged-chr9-89228334-7	15.610571373422	-0.0428695967462938	0.466093933513674	-0.091976302766095	0.926716867422363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87907940599987	3.05989870747768
Merged-chr12-84389140-3	6.80998844401599	0	1.29603002622364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13239780-3	4.62141565775	0	1.41796763294344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132101022-2	4.26161882354268	0	1.3202191708723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97814701-3	4.85686649780192	0	1.31064875442881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12010615-5	11.2479662674049	0	1.2836061274195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122892640-3	4.12798413576237	0	1.30166505100396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31088473-7	15.3860867677463	0	1.29835924502412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24745730-6	11.1731866138538	-1.96640438302633	0.633451032596634	-3.10427212497496	0.00190747800963838	0.0313181050296054	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73176135242269	1.17564474993106
Merged-chr4-8432638-2	8.03098523339052	-0.928055282268527	0.608751148252919	-1.52452325540903	0.127378052096324	0.739945434464075	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87652230223261	2.98191404061908
Merged-chr2-52084297-1	2.92577573492484	0	1.35532262398361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53357512-1	2.80732512702895	0	1.36996210064991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88673776-2	2.89078373386909	0	1.3476839618975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111583307-2	3.51107255198086	0	1.35161189039981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79874161-1	3.27823629949048	-0.00579766820410108	0.851400416189296	-0.00680956703081063	0.994566793590211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56775306994209	2.19546283737452
Merged-chr1-77438801-2	2.72275473951611	0	1.38513330808536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58978825-1	2.87828785841029	0	1.40270243950629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80894718-1	2.78869445903945	-1.01163851792631	1.16873287043966	-0.86558574975798	0.386717373046007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57525064037434	0.683637474991079
Merged-chr12-24780683-2	7.1619552019438	1.35860803797965	0.742268765291799	1.83034515462274	0.0671983432945369	0.461373430061305	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05770287829126	3.82849232429759
Merged-chr10-94065999-1	1.3740250571453	1.23521866327863	1.59992082796439	0.772049867523897	0.440084892753467	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr1-120518805-2	5.82362146391135	-1.26043339827205	0.843577251042707	-1.49415290267025	0.135135659314577	0.77022021749414	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18157730363932	2.01913900782325
Merged-chr6-31455653-1	1.39155186641202	0	1.44267935898747	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73513421-1	2.4455953856022	0	1.43129872753414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59823252-2	3.47056504523352	0	1.35759412534401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121339384-1	3.67568378369058	0.141412312441668	0.794132187363809	0.178071503323771	0.858666821386393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66884869349824	2.25610425458292
Merged-chr12-103345199-3	6.08856917224106	0	1.30304169829917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142054753-1	2.61679826323789	0	1.34264284387207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19778114-1	3.02714896869767	0	1.3243555731303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11691044-2	5.85001734893656	0	1.30824809477826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117942086-1	2.41654858906862	0	1.38052586193581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84854640-1	1.51865610600586	1.25336220937588	1.5140471524413	0.827822440902791	0.407771063825124	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr16-43109505-4	5.76035534312184	0	1.29852639468142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164414778-6	19.5699130452084	0.64070753958957	0.342647953729386	1.86987119758369	0.0615017063697118	0.431767351142586	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8009588937249	5.46649016921209
Merged-chr2-170247834-3	4.94524335769749	0	1.29803630056723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122852181-1	1.96537314387601	0	1.53881337226768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20131670-1	1.54237280903352	0	1.42743714398247	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116913720-4	5.69334348666311	0	1.32075239849255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93298334-2	2.94376623626028	0	1.35212324652346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64006175-2	2.30409409322221	0	1.62321810198735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84250281-1	1.99262103845174	0.2877416984907	1.03459191900795	0.278120960742289	0.780919505912324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55136416109049	1.69686753743604
Merged-chr5-24265845-1	6.95006558439859	0.517678323221793	0.757723617427614	0.683202042691044	0.494479182067693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46080498700841	3.43325798495756
Merged-chr18-36511173-1	4.58840684515854	3.08065989023011	1.13708143919944	2.70926934872761	0.00674315723446297	0.0818878187406091	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.72320011534497
Merged-chr11-68447372-1	2.57216497685005	0	1.32593433231945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125651503-1	1.93999021104039	0	1.40331463729418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84285140-2	4.43557576658499	0	1.33621902155062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-157585811-2	3.81507259317232	0	1.35733027212893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21385223-1	2.77915242932076	0	1.36004755049698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106711653-3	5.89234253133405	0	1.32961241901952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134092194-1	6.73988461538545	-1.58949855591265	0.844423581359068	-1.88234742728811	0.0597888589834911	0.422602788440801	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28946617855784	0.666688015277142
Merged-chr6-99188603-3	10.8428189967044	0	1.32635157356094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31061909-1	3.61914386470673	0	1.30892463176449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31821833-2	3.14745472872151	0	1.40656258859032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11559294-1	3.38401403709299	-4.05968031463866	1.20814501876068	-3.36025911757107	0.000778694019646182	0.015599184367811	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19862469988072	0.423054662900563
Merged-chr5-123900764-1	4.06501784370511	-3.8949422360453	1.08564023966727	-3.5876914780158	0.00033361871888121	0.00813457044925804	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31937098602976	0.306240821987646
Merged-chr2-11280063-5	13.8778846441293	0	1.295639472756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55808857-7	19.3829798802212	0.448812691633313	0.429658247383674	1.04458065070618	0.296216826265221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49265720867183	3.85008038332742
Merged-chr8-71309632-3	13.6410476182304	0.380864207153754	0.46303554358152	0.822537734809337	0.410770919543616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75002856976238	4.11695961502112
Merged-chr11-77604528-4	6.10053978912206	0	1.30687133750966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181856005-3	4.73897313921852	0	1.30718809676131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6371543-2	9.11224013459904	0	1.31301763084817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79532903-3	6.63212736878602	0	1.29565122522889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36822646-2	4.6061989661096	0	1.32402108213978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155533613-4	11.4269325987662	0.536969390297427	0.415275050913581	1.29304514951266	0.195995444061568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37692016764801	4.91157916788833
Merged-chr2-32665565-2	5.01856182927372	0	1.31939008652305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142342774-2	11.5296354765583	1.13674394930099	0.554304672933042	2.05075656910131	0.0402906589747716	0.31789826145441	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.384528706695	3.30457403055127
Merged-chr3-87518594-3	10.2085994533083	-2.07874783595424	0.804291698775974	-2.5845695524619	0.00975006370668389	0.108873489914041	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13675392121762	0.989878296978726
Merged-chr16-3703092-2	4.30935885139444	0	1.3429669550113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72107155-3	5.17776634145451	0	1.31500098572429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154402187-5	8.80633627619523	-1.23957029097293	0.589590203961824	-2.10242687657205	0.035515898902275	0.290393134342851	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56882277094424	2.15258675016244
Merged-chr4-135709349-3	6.72970081613073	0	1.30051832659942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56477297-1	3.96217686875778	-2.93674293164313	1.04104068634682	-2.82096845028087	0.00478789114383577	0.0629136405962381	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80255300392203	0.666688015277142
Merged-chr6-81448568-3	8.35916548659121	-3.4888230911328	1.03648942467692	-3.36599969866579	0.000762667916859139	0.0153581811078821	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00675221587335	0.423054662900563
Merged-chr7-12903886-1	2.7061849899339	0	1.36151627704361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58700100-2	3.35424173209673	0	1.34811707017099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61004360-1	3.79483720681648	0.601687629615806	0.850494976154903	0.707455830410713	0.479283252169152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45376057689747	2.8254465302512
Merged-chr5-43841584-6	21.3191992122182	-0.175952563988968	0.462549107284829	-0.380397586370478	0.703650306005405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35254722532714	2.57258995054397
Merged-chr19-24265171-8	19.8120452311233	0.63636272347452	0.465502554712984	1.36704453505499	0.17161134670725	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61222286353217	4.07623362038649
Merged-chr8-120576008-4	7.38567493085808	0	1.30019875661727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67394099-5	11.0169531756088	-1.54137634504221	0.728715307191688	-2.11519688118306	0.0344131706594733	0.283576677164432	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01367205633697	1.41695929335733
Merged-chr13-56354086-5	11.1012358943002	0.188758492111863	0.658102728704206	0.286822229841723	0.774248440815591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54800227790646	3.88029652315314
Merged-chr18-46335055-3	6.56968500276618	0	1.29453821107807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113638210-1	3.16595011021573	0	1.3545742455103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106704866-3	3.50220743921128	0	1.34397526327516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59175439-4	5.88814242208756	0	1.30789265819294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47104198-1	3.42058090636365	0	1.34638309735942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131868770-3	6.03509726796478	-1.33160463926834	0.805052474353342	-1.65405943300523	0.0981154375367113	0.611838093451087	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82780017367555	1.31470332505763
Merged-chr10-8898475-1	2.53406469985575	0	1.36670798060085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154943831-7	19.5127925737466	0.0525998758101596	0.354911292911259	0.148205697763783	0.882180435313169	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83523311457359	4.90773139833454
Merged-chr8-117264770-4	5.72937082940984	0	1.31385967552581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116160272-4	14.573111544905	1.49390982686158	0.558477680106896	2.67496782785596	0.00747364217610774	0.0882335359783082	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16461779217381	3.47895994633412
Merged-chr16-92412598-4	7.68726826956295	0	1.29311016205998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34667388-4	9.11128937406191	0	1.28805185009623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38307890-4	8.25188095223587	0	1.28865748573692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58798230-4	5.97842739236744	0	1.29408070049396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52133017-4	4.62793786693782	0	1.30375882199228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173737051-8	44.1418514558799	-1.6022382096254	0.494459409826387	-3.24038369537344	0.00119368956681746	0.0217641848307069	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91821506328424	2.11086637835816
Merged-chr2-152696945-6	15.8806106934792	0.0901077219232695	0.397275677262563	0.22681409177667	0.820568305598222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82186413801187	3.81695250779713
Merged-chr2-71938996-5	14.1211493821539	-2.55902470254769	0.668971138450205	-3.82531406134522	0.000130605479249531	0.00391672585912796	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11553087347681	1.2972429702454
Merged-chr8-116636094-4	7.10572724696629	0	1.328556748478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115543112-8	31.6153275317728	1.21768118982476	0.389472068300405	3.12649170231522	0.00176905496611323	0.0295119683907228	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71449454813767	5.17368306741641
Merged-chr5-34773587-4	6.93528607659358	0	1.2896355625306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82647355-5	16.0637268624515	2.28154886355081	0.54569650642522	4.18098491869943	2.90249117006418e-05	0.00117951609452123	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37410459183365	4.40029164523581
Merged-chr17-33771120-4	6.99556269018219	-2.33048283991243	1.08784403755867	-2.14229499767491	0.0321697511273745	0.270547823728457	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24046191862908	0
Merged-chr7-67440785-4	10.6598424054308	1.6563595930631	0.783056703771309	2.11524859577327	0.0344087651100366	0.283576677164432	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15053321103858	1.83529069928191
Merged-chrX-159645473-2	2.7118605039923	0	1.40358196136196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75993776-2	8.50451888197754	-2.41102022341162	0.678418201527306	-3.55388493112913	0.000379585255616972	0.00889364579187761	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06493407582084	2.27589464621145
Merged-chr10-67715805-1	3.22797440340241	0	1.33405350182942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93005663-4	4.16414643073063	0	1.31404184438746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61367855-2	4.21819496448701	0	1.37849603941739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104289747-2	4.6398040946237	0	1.30481991424067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67308440-3	6.42251660720252	-1.01746444657395	0.837284228546176	-1.21519600141118	0.224291345140259	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97042750748	0.989878296978726
Merged-chr4-139232240-2	5.94899101367942	-2.1520729648369	0.9846014935188	-2.18572994150735	0.0288353689782501	0.248454116726363	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74800762147655	0.73596151290311
Merged-chr3-10292802-2	6.03005152603086	0	1.31220024496174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20743091-5	8.02554621060079	0	1.30717943526331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35423238-5	23.6628713719536	-2.73126642031535	0.863985138760932	-3.16124236145119	0.00157097725147157	0.026908801959282	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21383509366584	0.683637474991079
Merged-chr10-41930173-3	6.03620082618318	0	1.33586592962825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5631170-3	8.6740545091821	-0.196021982043302	0.413085218791401	-0.474531581199687	0.635120882826713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35984267645392	4.24250325402666
Merged-chr10-70251406-4	6.92116500776211	0	1.31432596218481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173490572-2	13.7855045147313	-0.564605808249444	0.833651212302613	-0.677268622557336	0.498235535305305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22145989067388	1.57167815999277
Merged-chr7-100868734-2	5.01938116888517	0	1.30633693144407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99093434-4	6.59868655882136	0.0368391934560686	0.846163548879149	0.0435367294004413	0.965273686443282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50688074261907	1.2972429702454
Merged-chr2-32404884-2	5.10220901937431	0	1.3126067960487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60817490-2	5.43788551814407	0	1.31109539248542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30787918-2	3.12250049427859	0	1.3753598968469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-38725437-2	4.076605985986	0	1.36525241073161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138291634-3	4.29388772122942	0	1.31180834679034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13891764-1	5.50604580673188	0.997750171988805	0.790305573772291	1.26248656861464	0.206773756352796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71503340555351	2.00110701584433
Merged-chr9-7240191-3	10.9657183936691	0	1.36017072722461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69756704-4	4.70032710438178	0	1.33939370552272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107738235-1	3.93187476944061	0	1.34968923514321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101352657-1	2.45438843109683	0	1.35323672728626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62968550-4	4.90979506892798	0	1.30110234115098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44581662-1	2.77335733249608	-1.84568138652732	1.37313507079341	-1.34413680473609	0.178904152477625	0.940066801849699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.854675866246237	0
Merged-chr11-110987337-4	22.999881399354	-1.62256705460966	0.342078619127998	-4.74325773047668	2.10308423662877e-06	0.000145735039795062	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.7232325435651	4.13579822281223
Merged-chr1-93011157-6	10.2533594193459	0	1.28636269031053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90259170-4	6.94941289040872	0	1.30401208934612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65605117-4	5.14621620851552	0	1.29871493764184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130784958-4	5.83222437916276	0	1.30395130963252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127626258-2	8.44089581990626	-1.74007828315226	0.529692338409391	-3.2850735360408	0.00101955758086557	0.0192889431613323	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42773719839203	2.36809407398891
Merged-chr3-59185818-3	5.00582404374948	0	1.31373465834801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103354237-3	8.24396174899067	1.83632038867017	0.628491730829679	2.92178925925728	0.00348026937495408	0.0494932932700216	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51576415835981	3.49186950474919
Merged-chr16-65394648-2	3.99616497105855	0	1.41722749813281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121720526-4	3.55949789534587	0	1.37739369188345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80523083-4	4.81207088672777	0	1.31838168405769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73025277-4	4.56258757699394	0	1.31609402425677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83565651-1	3.2451709621967	0	1.33202995810529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128772059-4	20.5561267361958	-0.0269251106290761	0.422290477847682	-0.0637596915902705	0.949161574370585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8892395110242	4.8327184429009
Merged-chr3-21963252-3	4.52193299780038	0	1.31224453701724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57637810-3	4.27837834340282	0	1.32640893075499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102882338-4	9.08065295654029	-1.54279327545085	0.89678741502352	-1.72035562676845	0.0853678176652674	0.550142545675992	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21631682583705	0.683637474991079
Merged-chrX-10786547-4	7.97744121163498	0	1.30659999096307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142490226-2	8.08807712062123	-3.14952737999867	0.810505539331738	-3.88588014166499	0.00010195980623752	0.00321867898473283	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7074690264839	0.843323834477631
Merged-chr10-63347336-3	4.85065975325742	0	1.30178435420122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103719106-3	4.58682412823289	0	1.32269841631128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50490302-4	6.0205467638949	1.30226173573846	1.32228187723077	0.984859399620421	0.324693138655968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-7394233-2	3.94767722417717	0	1.32009196632387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113622280-3	4.1623615578283	0	1.34408042731219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-62826784-2	4.24606753731649	0	1.3132538439835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99216013-2	4.37204555806819	0	1.31266836610406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35495568-2	3.35703642876927	0	1.32703239277443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112335831-3	11.439191934471	-0.857248391164695	0.620529106796928	-1.38147974329468	0.167131501975511	0.894608054398078	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78374546782381	3.90951035258897
Merged-chr7-100191010-3	5.03037282247892	0	1.30795859727523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120446574-5	16.6074533837254	-0.597011260157889	0.44495569493322	-1.34173192287715	0.179682932441663	0.943173018180813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04455681780526	3.52176692937687
Merged-chr16-44032555-2	5.14406916276896	0	1.3455840618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34416108-8	15.1667473162272	0.342298419593285	0.478658873259219	0.715119762144079	0.474535043584561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46860220796584	3.13052297088399
Merged-chr7-59293525-2	6.03893896089526	1.1496861951893	0.705419357653668	1.62979110612067	0.10314565414785	0.636283953171473	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00436265314701	2.92460878937686
Merged-chr19-44282418-1	5.9635254471447	-1.28469752719378	0.680964992712846	-1.88658380524933	0.0592163266827303	0.419728497367924	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73658077823084	2.25104685314663
Merged-chr15-80007236-2	4.45867495698281	2.82783076023597	1.03829724371893	2.72352717619413	0.00645889014646386	0.0792903692486994	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	2.6960750002622
Merged-chr13-38010261-3	7.63904640609099	-1.18285795229647	1.27679717246874	-0.926425886430623	0.354224696424672	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	0
Merged-chr7-128019389-3	5.03292844036731	0	1.32949751317509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22934651-2	2.78659757687781	0	1.46106443993381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145243025-4	9.8634324384054	0	1.28771521564451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9947259-1	1.82333502558315	0	1.53108163588368	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20055551-1	4.38598447383412	-1.66130018630805	0.841895744724838	-1.97328493072622	0.0484631088103491	0.362763124637449	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96741630188359	1.69561508165372
Merged-chr18-50112249-1	3.53970824910815	0.172985335855108	0.795862699944998	0.217355752276194	0.827931111425096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30609416716431	2.79801987373515
Merged-chr13-70933621-1	2.21504167291915	0	1.42661709908668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56701048-1	1.97542909028872	0	1.38161662942394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-51227948-1	2.32676127834381	0	1.40761962515578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81059695-1	1.91648254359728	0	1.42676871683158	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135907711-6	19.0138714485603	0.804834144181985	0.413408835419616	1.94682376191856	0.0515558671576767	0.379046995419165	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48208062137577	4.25007801705407
Merged-chr9-68956710-1	2.45589673250109	0	1.37744936031885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55655252-1	6.65954606989578	0.213891023493823	0.652741171370432	0.327681220176073	0.743152704232011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14132151031716	3.46653724581267
Merged-chr10-41620981-2	2.5736840580784	0	1.3320291200428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124068295-1	2.76535010220932	0	1.3450715677299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23257429-1	2.45973189334013	0	1.39525072609519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105686455-1	2.62713631164621	0.0890598260635633	1.36747931187323	0.0651270006721826	0.948072882635986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr14-46887778-1	2.90719979885804	-0.668159161656077	1.27167143634996	-0.525418077781062	0.599292589159499	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37088741670103	0.73596151290311
Merged-chr6-97483577-3	10.2905973456809	2.35820982127446	0.658406315662597	3.58169380392599	0.000341373757409111	0.00825894466925427	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07197017981596	4.5684140532601
Merged-chr7-34840163-2	5.42788769037521	-0.326281289068625	0.876083516413386	-0.372431717930722	0.709571442182217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0142414978134	1.20440436174322
Merged-chr10-20507273-3	5.61768138547208	0	1.30396551392637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129782065-6	16.8921669988849	1.696330939555	0.441480704592736	3.84236711119652	0.000121853392615869	0.00370872463617913	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41270775919845	3.90644023891696
Merged-chr18-36304525-4	5.86153078664766	0	1.31883225376792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64743238-4	12.1019813643419	-0.143090645331951	0.637321335907477	-0.224518837311802	0.822353610970882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91505889346934	2.08209013916031
Merged-chr8-84187472-4	22.8831681956298	1.39466364319741	0.368736959280489	3.78227245220765	0.000155403132302943	0.00448541213934103	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73423713577762	5.17067854783861
Merged-chr13-3573960-5	11.4791511572133	-0.501495060517487	0.604977585345204	-0.82894816711487	0.407133737917877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17307969591479	2.2082769914992
Merged-chr10-98494551-4	5.74587518122149	0	1.30484244220574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82765418-4	5.87759842843423	0	1.30509531592198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64278266-4	5.50145040077683	0	1.30368889364031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86463963-6	17.8686425408489	0.11230990196462	0.386936407380159	0.290254160173347	0.771621804830726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42084336468555	4.40158484288402
Merged-chr18-61385244-3	6.39390935724553	-0.541701434700261	0.723080044881957	-0.749158324219408	0.453761784892487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46754214380899	2.0007239609608
Merged-chr6-88306931-3	5.06643267258673	0	1.3232336820336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29959240-4	4.56202659358833	0	1.32010841190083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56673177-4	7.2841024424778	0	1.296371450689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69145970-2	4.23579529394536	0	1.342362954599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34283747-7	46.2046605713844	3.84938310828561	0.583423296735212	6.59792491973912	4.16952311306901e-11	1.6976274702914e-08	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40831458101256	7.14876638196074
Merged-chr10-110932020-3	4.66329433874235	0	1.30956441910433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18583063-1	4.85732317007707	3.76799927536309	1.08023926225269	3.48811546388848	0.000486437965313727	0.0107678778053492	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.16448544747254
Merged-chr18-69588616-3	3.71308744075611	0	1.33063707003486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95880339-6	13.4848256782208	0	1.29328974444159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151615817-4	5.07200927645751	0	1.31322366111764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94265918-8	13.3100347534631	0	1.29734377612203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103177213-4	5.9863094794965	0	1.30181564405079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31940871-1	5.33107687820763	-0.39386711916975	0.82362621239056	-0.47821100548337	0.632500030181315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53372929161249	1.48233004913473
Merged-chr10-43707960-2	4.83578481685051	0	1.31831358902876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72203828-5	12.3930242374159	-0.561110178529442	0.484024535983228	-1.1592597829563	0.246350309522301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60472461206054	2.75541628522075
Merged-chr12-111743499-3	4.29107840011172	0	1.31760465358292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94702871-3	9.70884893968238	0	1.2866493644576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20207254-3	4.3979384402889	0	1.31110964439434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59498825-1	1.33355094219882	0	1.58657850258487	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160149579-1	3.12031885986688	-2.4906169795637	0.930865725195549	-2.67559209900062	0.00745973740388389	0.0881171367306935	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67837428267543	1.15307255889252
Merged-chr10-80598185-3	7.42568590855675	0	1.30166656587521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46515563-1	3.19506853818576	0	1.35426454532733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75469258-1	4.13695390067305	0	1.33249336267079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-64884653-1	2.7153380942971	0	1.3900697848262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-151424590-1	1.90582321720704	0	1.44772724794701	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21158985-4	6.23061254411592	2.40778674584782	1.20157459566823	2.00385956438166	0.0450851060961751	0.344100777895428	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-134074308-2	6.66779908988104	0	1.31202674115748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9658057-2	10.6791379995723	1.19748040359175	0.489294825684247	2.4473596300904	0.0143907168153484	0.145344015612946	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83727220859856	3.80476964236609
Merged-chr2-148523150-3	6.80205212246166	0	1.29697593864689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94692439-6	20.5427437768932	0.287595355204043	0.332871712733925	0.863982562056654	0.387597469969492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38388645425333	4.84146594160174
Merged-chr7-100430168-4	7.21764911537137	0	1.31395873739441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93096018-7	17.2017015325117	0.564507226376501	0.450851399912614	1.25209154609682	0.210536507819465	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5245052297001	3.94287731765737
Merged-chr10-13201915-6	15.554667763511	1.17991134604955	0.402651966977739	2.93035038399498	0.00338579994451552	0.0485833296386278	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21602373827161	4.27280350574833
Merged-chr2-76620385-3	4.90727443951343	0	1.33095805539442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85502395-3	9.00921262933307	0	1.30906329959588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8931151-1	2.43940741918274	0	1.40296312640658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161443885-5	12.9762753956655	0.0926952291320209	0.551540001795277	0.168066194347274	0.866531204017911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5743078495539	3.03549797332798
Merged-chr9-45121952-2	4.50093970601491	0.772408885814212	0.918541629796595	0.840907870430714	0.400399548925498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21860784935357	1.40000983364339
Merged-chr10-56441167-2	2.4375616337818	0	1.62540456180741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84352742-4	5.50173385935248	0	1.31598091229165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125213243-1	3.87532333360243	0	1.33369097675704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31069278-2	3.59597002050069	-1.73417915396206	0.978327418163617	-1.77259588330584	0.0762956943737258	0.50739043807709	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51768258563601	0.733321818366247
Merged-chr15-39232933-3	3.99077495309516	0	1.32370968032151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61077316-2	3.44958087418618	0	1.3454831944418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37517674-3	5.79895430947021	0	1.34546508485254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45117034-1	2.67802954199382	0	1.37595219832564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127330443-2	4.69431815875594	0	1.34898037637992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75887012-2	4.99997985403526	0	1.32818791672393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85560139-4	6.26719456965293	0	1.28996074142441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107347537-3	8.0319579447546	0	1.30880937321618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102368929-1	3.71049416699513	0	1.38090984879944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44182581-2	3.43600028108014	0	1.3715667933476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57528727-3	7.24529602474125	0	1.29574207344469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141404981-4	5.9574501831408	0	1.31358675528894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99476763-7	18.3922402397055	1.05931389133823	0.339665844188142	3.11869417977591	0.00181654399991997	0.0301355380093349	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76183211148352	4.89941523470821
Merged-chr13-112258695-1	4.24705774951574	0.716665512645102	1.0497018079423	0.682732474329983	0.494775905469069	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03337619474158	1.27911570690487
Merged-chr16-97523248-5	15.1335437543671	0.705104212407688	0.45483736490951	1.55023370287085	0.121085433266951	0.714700453641241	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95741204099923	4.49606850931057
Merged-chr14-78725268-1	4.12722749884022	0	1.32197430746709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95006759-3	5.43773224696778	0.743514624199326	0.952444797392889	0.780638023573162	0.435015421535106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	1.20275690226768
Merged-chr1-172143778-3	5.25310342340841	0	1.29590709366146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43928713-3	9.9825513022199	0.338943032453028	0.493695889243731	0.686542140288506	0.492371300309737	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59182667795344	4.61684495365026
Merged-chr15-51955803-4	4.35481127015599	0	1.32015689101867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31003379-4	12.1620104687426	2.57800165080751	0.651086812673477	3.95953596452335	7.50955353926052e-05	0.00252687582686158	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19057300362564	3.76771232153608
Merged-chr18-67769868-4	14.8253400379178	1.01746774577358	0.506531607913241	2.00869546910457	0.0445694395295412	0.341871949078968	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1327065589109	3.90351574482649
Merged-chr1-120550167-4	8.55201221136624	-1.66003248220251	0.813103017740633	-2.04160167405999	0.0411910591196307	0.322935926722422	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30406447767539	1.31495854024319
Merged-chr3-101003930-3	7.17275680174388	0	1.29466158074347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147911907-2	5.97574433382723	1.42090095112817	0.800729864937296	1.77450725063119	0.0759792838375017	0.505904043371244	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.859258899646375	2.13115973951627
Merged-chr8-120124453-2	5.29732160911343	0	1.3316218612968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77832223-4	5.46721595183591	0	1.31357006175425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16045609-3	4.29285769652718	0	1.34198269214675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159269310-1	2.74795604746711	0	1.34070220590691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125579100-1	7.61975467255368	0.464803853640759	0.700407514245325	0.663619170536135	0.50693408439573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78164584847814	2.59657321676073
Merged-chr13-107923884-1	6.55335051268422	1.78249420541983	0.661950878302786	2.69278924440749	0.00708570441154274	0.0847405637768433	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51332872898306	3.34276853781599
Merged-chr6-134102606-5	13.2371684271355	0.747443306633633	0.509242635421656	1.46775476883381	0.142170847777685	0.797929761992664	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76918380705851	3.28929836021151
Merged-chr3-116186618-4	6.86806276550605	0	1.33829101740924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16309793-4	5.58304535172187	0	1.30623609691984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108408343-4	6.05043287396224	-1.79471770876591	1.14119426489572	-1.57266625321667	0.115796117845491	0.691475200286163	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994475741705525	0
Merged-chr12-110844809-4	9.43172622472266	0	1.29195384643222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97509600-3	7.53922765399935	2.22183176819747	0.962772703641685	2.307742793074	0.0210134464302773	0.194634255199561	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.92713101668536
Merged-chr18-43492978-4	4.70527045053425	0	1.32908996525486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-65106082-1	2.13284178669457	0	1.49675631794538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174171287-3	5.94661572711649	0	1.30827064582594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74918812-4	6.39431848110002	0	1.32053601259105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186202712-1	2.52530371964898	0	1.51526762913961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-42034248-2	6.31369555864005	-0.207032462481513	0.617178262096428	-0.335450023431263	0.737285638347355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88535539263854	3.5849767083096
Merged-chr9-7259880-4	5.30381303414763	0	1.30690902790301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3982924-3	5.08852161021318	0	1.32498943688957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120303112-2	4.66943814600695	0	1.31456059274256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34378567-2	4.19830111840013	0	1.32898030959455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108751535-4	7.93475475004409	-1.77874743201045	0.700244859743643	-2.54017920625886	0.0110795682080169	0.120047332800708	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31083603553034	1.29451429493117
Merged-chr8-47872505-3	5.29378923153187	0	1.31864260266245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104300120-2	2.87625578438322	0	1.37455993189711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44415287-6	15.7165868841181	-0.128297131885	0.400606114928253	-0.320257547511419	0.74877310186301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81074456338414	3.70759181182713
Merged-chr4-3648409-7	20.1500252779597	0.965101085464028	0.410149036397707	2.35304974489372	0.0186201429177038	0.177317379641544	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02234030910653	3.91910873490697
Merged-chr5-105506592-3	7.73020147826538	-0.226022087213066	0.741986299406434	-0.304617601960948	0.760657412364337	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02606974233728	2.80367142236436
Merged-chr11-20656070-3	6.94658275122779	2.48629175815808	1.21715479031408	2.04270794310106	0.0410813580534423	0.322385303633991	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr9-35099507-2	7.05530531959063	-2.44730719038732	0.696234152105267	-3.51506340645194	0.000439649004515962	0.00998303223749062	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05624732363716	1.26857811924232
Merged-chr13-107917779-4	5.69909433710104	0	1.29875604189123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59459474-4	11.0974430392985	0.263243822749032	1.27526625841225	0.206422636067216	0.836460790542903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.306240821987646
Merged-chr1-184230626-1	3.35973426211218	-2.99170284942552	1.27937233350365	-2.33841452646748	0.0193657548946998	0.182872054819228	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56853034602474	0
Merged-chr11-17733242-1	3.09043701558337	0.0955710393087543	1.45552006434246	0.0656610936874505	0.94764764827502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr15-66272594-2	9.25202830082573	1.81796530906039	0.647200443364807	2.80896795992406	0.00497005926211164	0.0648636154684619	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13483736379423	3.67739773165704
Merged-chr4-12498628-1	2.37800553768129	0	1.43975597676177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46848406-1	5.14717855533781	1.22280552160955	0.856932750887648	1.42695622304424	0.153592513367558	0.843771028038371	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20668822142908	3.05317232150345
Merged-chr18-79271604-1	3.41950486614309	0	1.34758876857839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44066037-1	4.56462872247766	-0.489916485623621	1.10169084793577	-0.444695067170226	0.656540134604105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45914930390671	1.46981335012887
Merged-chr2-167385523-1	1.61924088383603	0	1.57968885482956	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132606304-1	3.3543825444375	0	1.33523282795098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21009288-3	3.55111732178905	0	1.34393826755883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-195002950-4	5.26817877494634	0	1.29861303690625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48225844-4	6.58671446062026	0	1.31656880078873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97422766-2	3.83621555313945	0	1.36808215903212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65046275-2	5.5368701765978	-1.43562542561384	0.954563131988368	-1.50396068893151	0.132591488991413	0.760762440919559	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09954942289868	1.20539659680455
Merged-chr3-19986338-1	2.30672820085103	0	1.38185407242911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84366163-1	4.07105084312299	0	1.37242106922617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113305570-2	3.12589781822475	0	1.33867573943241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77355204-1	1.98669449607661	0	1.46378061142378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80719467-1	1.60824472725484	0	1.48382564382201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91508234-4	7.77553321325437	0	1.30849230858017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122022448-1	5.1804376958046	4.43463628514455	1.13666915155621	3.90143101805226	9.56257127054092e-05	0.00305712222233252	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.36881257059414
Merged-chr19-11970542-2	3.90422087113874	0	1.32352921102726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-10750328-1	2.36562233381882	0	1.53361702564478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91000096-1	1.29503376089739	0	2.31304157900226	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5830158-1	2.23164063662933	0	1.37473983325882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76387991-1	3.27168809103648	3.3792838886859	1.48693800782669	2.27264611631326	0.023047514208193	0.209378960579533	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.63879159991986
Merged-chr6-13597252-1	2.64035825122051	0	1.36673341736192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47182298-1	2.81499806622491	0	1.35931062691629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156860583-1	4.042046030815	-0.372955180837477	0.8751921411237	-0.426140916163418	0.670005167200541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19867160449801	0.905469781553611
Merged-chr4-53154963-4	11.0108979734999	0	1.29064121166345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66293732-2	4.44106252421499	0	1.30988105002772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60550500-1	1.00760879922901	0	2.02538554794168	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119424072-1	2.51925660905537	-0.364921011201849	1.25098559343967	-0.291706805510425	0.770510805385994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59283317534526	1.26857811924232
Merged-chr1-161379059-1	4.63144496932218	-3.44746532860026	1.06579869639012	-3.23463083627039	0.00121800101406042	0.0220964725887818	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41286879528945	0.563523181795778
Merged-chr13-119601502-2	3.27655039111773	0	1.432707009189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32645913-1	1.52731875328956	0	1.5706084543347	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60481905-3	5.51018293648905	0	1.29777504156882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92345270-6	16.1468124401165	-1.15209638019983	0.617639611937639	-1.86532139120014	0.0621363685081327	0.434997316167258	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56707757589861	2.16448544747254
Merged-chr2-103906891-7	13.5033463423547	-3.40901795640216	0.805897475805244	-4.23008888692188	2.33598990486581e-05	0.000997696707995827	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98989188631479	0.581381506691384
Merged-chr16-45148719-10	40.425991746855	-0.226401893265874	0.301233879833946	-0.751581772245133	0.452302608348112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.68668502884531	4.42081360126602
Merged-chr10-117304569-3	4.23941523855411	0	1.32115255514008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80245855-3	5.72265390826057	0	1.33606703739025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30686667-3	10.3472693966806	0.919099855234183	0.554188778083877	1.65845988150824	0.0972246786555167	0.607480541004308	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21038652748318	2.74513974358707
Merged-chr8-121925814-5	15.6243272407733	1.27591448632347	0.380397134226796	3.3541642970495	0.000796050811917704	0.0159078704451297	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83472760232637	5.18866328668817
Merged-chr18-80119073-2	4.9872807796645	0	1.32432475469984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57332480-4	5.62472606580305	0	1.31973209674375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70943398-2	4.43950896215933	1.42526452127494	0.988477339875586	1.44187880063526	0.149336567634926	0.82685539304117	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00967833035899	1.87791898198041
Merged-chr15-6602656-3	6.9412261839979	0	1.30703018781369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41088453-3	5.1051491823601	0	1.30556999735613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125563864-2	8.50586809151888	-3.61214707069504	0.792581542008004	-4.55744535955716	5.17795547856419e-06	0.000297588987425027	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59507015032276	1.04220233489076
Merged-chr15-101105590-4	7.7671650204413	0.640622087259487	0.75076829755674	0.853288676871804	0.3934992377623	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51958224843084	1.5122114716189
Merged-chr17-27561229-4	11.0173782559356	-2.60754838475672	0.639542633586127	-4.07720806685761	4.55797028683187e-05	0.00169519138510709	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61586325530411	1.45575152610536
Merged-chr3-96069848-4	10.0538077007329	-1.86583056837929	0.711592201487911	-2.62205033230819	0.00874025218927761	0.0999258994984862	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03903752344608	2.03169262342392
Merged-chr8-119827570-4	6.51315221259039	0	1.30499343146138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-65421656-4	9.3292620339486	0.518853628594868	0.63337987565834	0.819182371488466	0.412682371113851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39866529286959	2.40252732300985
Merged-chr5-64813622-2	4.20651499719676	0	1.32398146885567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120914704-4	7.86455465122855	1.29679809161251	1.05400022591015	1.23035845698486	0.21856290275451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0.989878296978726
Merged-chr15-81080646-4	4.80728254690302	0	1.29837575356599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84703341-4	9.85822146103448	0	1.33317545043214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39619652-3	10.1477695083476	-2.33030219591338	0.590797062162307	-3.94433612683264	8.0021352314588e-05	0.0026574812587299	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29224561880188	1.41926493179619
Merged-chr2-27699695-3	7.74390346061994	0	1.33492736555559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191880262-7	22.542000468372	-0.348741619849136	0.344905467202333	-1.011122330643	0.311957883727344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70477585604106	4.13571495897337
Merged-chr11-108011260-1	6.24143527271453	-0.192543128956351	0.757707565935177	-0.254112717904183	0.799408478328676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97920829460486	1.84016081186083
Merged-chr1-87873221-3	6.00029077626581	0	1.31238824155244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55250590-3	4.28014960806243	0	1.32910795757496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-85618931-3	11.2134969242989	-1.99279316611408	0.997207053421281	-1.99837451939101	0.0456760719750406	0.347041518128105	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95500717573546	0.609949614787909
Merged-chrX-107144124-3	6.14813500152067	0	1.30695232272316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54777762-1	8.03683362487553	0.942024409049463	0.555650233617624	1.69535501302016	0.0900080945638384	0.572703889714565	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11316866556092	3.3137690657033
Merged-chr12-76490981-1	2.31226844359586	0	1.6306368860081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16016305-6	11.5979888955723	-0.664220880586474	0.730949618842845	-0.908709524519612	0.363503475262036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35107992264082	2.73430231295182
Merged-chr3-41599924-3	4.79613176423319	0	1.30268207633202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64210775-1	3.201497623324	0	1.37557598027964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-53449553-3	5.12641962494452	0	1.31202925966737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7887277-1	3.24655009531885	0	1.33968329270565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88482205-2	4.10942856757409	0	1.31995976491247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87016566-5	12.0797504928193	-1.32197494446681	0.540729497411294	-2.44479901835516	0.014493288246648	0.145996364076686	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12732527711526	2.777595139262
Merged-chr6-108444675-4	7.42566618548689	0	1.29882751686166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89883760-1	3.54396971432538	2.49688309094309	1.23236765938067	2.02608618616128	0.0427559534257184	0.331505758490388	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03300427768847
Merged-chr3-87255456-3	8.45651834552848	0.603908707514334	0.565963343829063	1.06704562070849	0.285951235725368	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38940273948738	3.73737634337609
Merged-chr11-26522807-2	6.97691676105848	-3.85387242397006	0.907969099203369	-4.24449733735582	2.1908396889944e-05	0.000944967724864871	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46552642358263	0.73596151290311
Merged-chr2-58920297-1	3.51710022462867	0	1.40411432832757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146030387-2	4.21063688903576	0	1.31728705154094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-22417726-2	5.79711435147082	1.11846212694884	0.841277982089772	1.32947985179706	0.183689708719758	0.958507362932309	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01726977381757	1.93871841517079
Merged-chr6-120190575-3	4.20147423201685	0	1.32527264814986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8816753-3	6.11798879071877	-0.73438267082977	0.723176919004306	-1.01549517349211	0.309869846100559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53315147887048	1.57928534738074
Merged-chr9-124143165-2	3.08682026495098	0	1.39356901088544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39319009-2	6.638565234207	-0.907335783665416	0.648759429193655	-1.39857047595153	0.1619418249966	0.875144764822016	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9227438069212	2.95451050129477
Merged-chr13-75761087-1	3.69958298299695	-4.07128742912995	1.28775943985334	-3.16152792449624	0.00156943769634661	0.0268965317874287	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3510904212227	0.382164212378408
Merged-chrX-93690923-1	2.05199606055594	0	1.38604455782429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95618743-2	3.65549689273681	0	1.52493237537749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47311073-2	2.61847640939449	0	1.48224972695891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32765269-2	3.77301764415305	1.92253333207893	1.24917729928226	1.53903960085055	0.123794628759054	0.725145972526176	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.683637474991079
Merged-chr10-59296468-4	7.00827018927546	0	1.31606220107077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43241430-2	3.70536307599526	0	1.32459037389896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41500975-2	4.9138794583705	0	1.34005490345356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96394210-1	3.73486066334796	-0.791812072393719	1.07674415419327	-0.735376244496044	0.462110385311088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24892818684159	1.64536602019594
Merged-chr18-35747080-5	9.44211710468081	0	1.30343706750105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4536707-3	4.96086784428277	0	1.30750546302416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97929169-3	4.1302409467382	0	1.34637283622809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59728602-7	19.3277812937147	-1.46248308622368	0.365684774174265	-3.99929991486805	6.35301313695585e-05	0.00221292108980553	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19337340531523	3.59171063471833
Merged-chr17-29371221-10	27.3799311377123	0.999303640186941	0.333405943234	2.99725802873761	0.00272420027055487	0.0412073127036293	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83911453126762	5.78896923892497
Merged-chr7-125473964-3	12.1166104463919	-0.599648099598066	0.66083980219871	-0.907403121910861	0.364193659125145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02018601069772	2.19193974227778
Merged-chr1-180289964-3	5.29918943105318	0	1.31020637731592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6029420-4	9.81178926686207	0	1.31396780388374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13898036-3	4.89667714859762	0	1.35977907534047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9897161-3	4.87540873556234	0	1.30971773163059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170510753-1	2.94630322180719	0	1.36360665034665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142370592-4	4.84814094764405	0	1.37367054604085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105299762-1	7.18431159472716	0	1.30665025710334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87354667-1	4.83209221426647	-0.825094417997602	0.843378553297449	-0.978320369627185	0.327915898435774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74028976248627	2.15864683236642
Merged-chr5-92367905-3	3.42705432539296	0	1.35360789763444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20696934-3	6.02437012767753	0	1.29700247404061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79243668-1	4.15292383516448	0	1.41147955682117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53265209-1	6.61316907610396	2.72522763509511	0.707243431952822	3.85330921712525	0.000116532070414887	0.00357339496636846	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.869935478824964	3.42265825385255
Merged-chr14-123837579-1	3.73953265405083	0	1.33779718147006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88222118-3	4.41860788822772	-1.13646673246136	0.759082683231621	-1.49715802713758	0.134352143893299	0.767092633888295	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63367984386279	1.50690972966086
Merged-chr8-125227463-8	24.8484322215247	-0.48755107983792	0.387343792848182	-1.25870373771296	0.208137360869529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.08407811521136	4.58782911407628
Merged-chr3-90644381-3	9.45326491895309	0.0869693862153997	0.596997090335891	0.145678073852031	0.884175531222681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12757571882847	3.35769076145335
Merged-chr1-64867879-2	3.40442673021948	0	1.34990946156267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-4969858-3	4.7751875056504	0	1.33179986165521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70768971-1	2.84283247953341	0	1.34019043467722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117983511-1	4.30056102149592	0.125225109812085	1.01966491484252	0.122810060431887	0.902257507498297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04328208259895	0.666688015277142
Merged-chr5-122109965-3	6.54411133482037	0	1.29264350225074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128235760-3	8.5798575552913	0.133109122725158	0.629148254219317	0.211570360137655	0.832442235032558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81706306945775	1.83545655066484
Merged-chr15-6622704-4	7.73963301812854	0	1.32476012824295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68282986-2	13.5605078399239	-0.418954603866459	0.477348830079858	-0.877669698690515	0.380122992999625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12078390482165	3.7506660875572
Merged-chr9-120564694-5	12.712810492575	0	1.28077291805358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91034148-1	7.38912998217061	-0.492425121042102	0.712029431553108	-0.691579728618807	0.489201295617796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13362391554208	3.16610210922829
Merged-chr15-74929591-3	14.9556057510957	-0.726371702990937	0.423460653194633	-1.71532277558992	0.0862860650926592	0.555020101343135	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18799317113016	2.9186122570587
Merged-chr14-51841899-1	5.64810603098231	-2.27246744158627	0.769699024935092	-2.95241044611938	0.00315303513843242	0.0460523545274933	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02391019916115	1.31495854024319
Merged-chr3-108767102-3	3.23769729347631	0	1.35334704344603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41243289-5	13.7676530442711	-1.11232042057898	0.617482970753635	-1.80137829424089	0.0716432749407047	0.484186725025886	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11334059552703	1.89494333369275
Merged-chr16-10982751-2	4.18728871137766	0	1.32654927486545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75089144-4	7.75512736689682	0	1.29929846163647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101302264-3	4.34381973315419	0	1.31759965309643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69005431-3	5.63472404198622	-0.0113465890786922	0.789959957312173	-0.0143634990275948	0.988539979941119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5787047628849	1.31470332505763
Merged-chr4-139170397-3	13.2526815147626	0.37996990908222	0.439302943008773	0.864938228002338	0.387072694143528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63189618700441	4.94100310931151
Merged-chr15-79436738-3	6.35833444561281	0	1.32650218677597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54227054-4	6.92439583522595	-0.161397548954181	0.832399396692499	-0.193894360802623	0.846258599336521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68447507574424	1.20539659680455
Merged-chr6-129211478-5	13.0425452679296	-3.12445674987534	1.07708213976781	-2.90085280826298	0.00372148640857751	0.0520402847966844	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31838677553013	0.306240821987646
Merged-chr15-85653931-7	22.3394740032735	0.484975043338011	0.459904269893376	1.05451302604876	0.291648100043494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00848730622099	3.86273285333666
Merged-chr17-34349583-8	22.8244845087316	0.220082862954246	0.343179872450948	0.641304693607004	0.521324740342727	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75406892234968	4.88418079652306
Merged-chr8-82940573-1	3.90630181600105	-1.39857621562544	0.809300462889349	-1.72812976114244	0.0839649628707996	0.54394512379848	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87890227914911	1.64538595732494
Merged-chr17-27937020-1	2.85615911356545	2.40387901837921	1.21369823977241	1.9806233045456	0.0476335334730148	0.358230046993627	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	1.62319166842064
Merged-chr8-128590505-1	2.65971138299647	0	1.3368518175313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34074682-2	5.02943307532882	0	1.36115684658695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134417370-1	3.12152257739013	-1.05586062750525	1.39861581151308	-0.754932568911096	0.45028944278393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08334532025186	1.30806904914164
Merged-chr11-69419538-1	4.01648518307264	0	1.3106340720336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37301907-1	1.65965039717992	0	1.52610633125424	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13384931-1	2.55748229600735	0	1.37065786590109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46315430-3	5.67391512428024	0	1.31593807487242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142738119-1	3.80879876898708	3.51672037753828	1.0739553581799	3.27454986909167	0.00105830457816182	0.0198609910868932	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.82878860577045
Merged-chr17-72890292-2	3.49526677071153	0	1.33585039593407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88291565-2	6.26020405629137	0.721013828719699	0.930810334577228	0.774608748888871	0.438570885986788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15501112447955	2.51909402565592
Merged-chr2-178013492-2	2.76870476255618	0	1.34955060179122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170055693-1	3.0354372477814	0	1.32354621817431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99271645-1	2.4299704320396	0	1.36766732176272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55455592-1	2.21883964688854	0	1.39914857041249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111608948-4	8.12971870901336	0	1.31043178910444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64358529-1	1.24315863177648	0	1.6848633381662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41104685-1	3.89091957816179	-2.69752417173152	1.25393716403821	-2.15124349855326	0.0314569853363138	0.265618011201821	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52847867774133	0
Merged-chr2-126427833-1	1.28329583549053	0	1.55233676539919	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43405289-3	4.23103950093614	0	1.32594836715777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-57712732-2	2.90325478633683	0	1.35893570735802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156258222-3	10.4050186491021	-0.544295223540811	0.58933660007547	-0.923572748529633	0.355708807716181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59402703231303	2.90170250395106
Merged-chr2-4504396-1	2.12232016271993	0	1.37289707458509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12780701-1	1.95716515524371	0	1.40391041421068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36745211-1	1.77290940130187	0	1.41388882592711	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33399726-1	1.79013377750329	0	1.54726794610341	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23975862-2	11.4862767985203	-0.227064320556747	0.48103409868033	-0.472033731454122	0.636902712012702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12932233310984	3.81525489107013
Merged-chr18-76012188-1	3.20708380931024	2.61024825508181	1.17406659166497	2.22325400757733	0.0261986769158308	0.230538478553984	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.593738791144649	2.39039253344948
Merged-chr7-19475137-1	4.66804357283566	1.75719138745529	0.962928189661043	1.8248415679614	0.0680249410052074	0.465510293740316	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16042367816644	2.31917258558244
Merged-chr10-36888321-1	1.77803971973984	0	1.46404043406893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69204017-4	4.89163051630138	0	1.32080079215591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134374735-2	3.87945410589598	0	1.3150098464425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40936583-2	4.0642139776129	0	1.32670688841065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103987604-2	5.37086396343126	0	1.31606773557069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56425444-2	3.52782480305626	0	1.33563612345632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25415410-7	18.0225100022134	-0.469820820394828	0.362250032198562	-1.29695176986845	0.194647782095992	0.998700845543711	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89950797462014	4.25991490583881
Merged-chr3-95674927-6	13.4932420858647	1.02194246520977	0.438237410494258	2.33193798780709	0.0197039536795255	0.185155961625291	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95736704984087	3.63531342397581
Merged-chr6-125516206-6	17.7596927923968	0.0751143742190738	0.448782246454898	0.167373764921476	0.867075966535862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66381470406373	4.72320374965776
Merged-chr18-67194392-2	7.88244783474111	-1.14986895867317	0.500794066977912	-2.29609141660196	0.0216706549754253	0.199561812292015	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66330198670762	3.56615894452728
Merged-chr7-67529261-3	8.47262926293386	1.69235830176685	0.522246559042988	3.24053509298	0.00119305586094396	0.0217641848307069	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90402156959069	4.83604753826494
Merged-chr10-21670429-4	12.702800239025	-0.809698956770062	0.52882301207123	-1.53113411914268	0.125736248905778	0.733669159835427	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93904708594035	2.68850931460485
Merged-chr4-130829490-1	3.8367565893457	0	1.31593601415891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31000716-4	7.29856209456991	0	1.31662425574587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61498936-1	2.80736908163758	0	1.44767137756986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122059670-3	6.56595419666991	0	1.3007415513713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92930256-4	13.5452873356878	0.789394010653027	0.818098581688943	0.96491306588424	0.33458835651053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29014418030098	2.13939166524368
Merged-chr17-24540543-8	19.0753049049846	-0.642707536212357	0.386022721251575	-1.66494742622546	0.0959232451406473	0.600690021749951	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03990793029514	4.3635861969707
Merged-chr7-63822165-4	6.42579029824522	0	1.31585343722157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102417604-4	5.95620489697717	0	1.29299903679079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47080428-3	11.9157604630518	0.152336587902343	0.517204973962492	0.294538133953427	0.768346728333401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08716977745068	3.40358289533015
Merged-chr7-120124958-7	16.2609211144187	-0.616169854373507	0.485633336164068	-1.26879645297937	0.204513670547461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23944106103999	3.10691078843424
Merged-chr4-41129586-4	4.09997200215183	0	1.32029281183813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118934034-4	11.6066951983378	-0.101544075269391	0.428907169126294	-0.236750706397007	0.81285019498159	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90871875710627	4.75364247148603
Merged-chr10-90983269-2	5.17234206774137	0	1.40178285307163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29875001-4	14.2194358792306	0	1.29031645173699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14974805-4	9.83432519391629	-1.08808078517585	0.462382757022226	-2.35320363627562	0.0186124380439621	0.177276824027917	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90864259311041	3.85806455998443
Merged-chr4-132555751-4	6.38034476652964	0	1.30780233399437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150257402-7	17.4568575553821	0.995054246601382	0.427317667773341	2.32860544191021	0.0198799775105319	0.186434702985537	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40026995913904	4.21591888190447
Merged-chr3-87243869-5	13.3530825624068	-0.229017931971105	0.541356466348512	-0.423044604077323	0.672262718133189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38749318820769	3.66174789280699
Merged-chr13-55421289-3	7.07464404949478	-0.211162257828707	1.1124070471335	-0.189824631525699	0.849446553649939	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.531725110705892	0.61242769162773
Merged-chr6-87517283-3	9.57190117819463	2.63165117072436	0.798081536256911	3.29747156295219	0.000975595531788973	0.0187008699384811	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	2.91051152313715
Merged-chr11-119433808-3	9.34588995051741	-1.81721037020523	0.749904085571282	-2.4232570606958	0.015382037769516	0.152759063842977	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06045796174514	1.37562316341215
Merged-chr1-82832655-3	4.26161479638117	0	1.39727793853019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13259673-1	4.82841060250732	-0.614642593652001	0.788363843938226	-0.779643306042029	0.435600858028362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06127846657885	2.21550655935007
Merged-chr1-34855878-3	3.98930816316702	0	1.32294610253884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78526238-1	2.27234416852089	0	1.42746423870798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37969565-2	9.52033457990387	0.536430166989018	0.723255381737449	0.741688455466964	0.458276116005867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89335455769196	2.8372990371539
Merged-chr1-71811438-2	6.12159925369563	0	1.30359833018457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3607431-6	15.3682033496093	0.482336439250491	0.440881011487887	1.09402860790647	0.273942431505294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35009133709715	3.11178402292607
Merged-chr3-79438458-3	6.88191153980579	0	1.32622742922118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48586526-3	10.9307053626918	-0.167321108450067	0.551290830653347	-0.303507874875719	0.761502847054448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18003057628568	4.07465453701223
Merged-chr17-8508466-2	2.92019280524961	0	1.39761208085746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111427895-3	5.10465916505547	0	1.32228738063977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41678950-4	5.54144935152262	0	1.32070359993009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76780713-4	12.0535541345428	-3.99138959087403	0.963747154904276	-4.14153190550323	3.44993870724089e-05	0.00135888905824812	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10962176324386	0.727201944460961
Merged-chr13-97203841-3	4.64463905013812	0	1.31717809389323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70462108-3	10.3944893491154	0.405532581234532	0.648585979449658	0.625256471900051	0.531802743455346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82203363107247	4.51078580148743
Merged-chr9-106858244-3	5.99862979009831	0	1.33198219115155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24519505-6	15.0273001318749	0.0693617879969514	0.498880507377647	0.139034873023101	0.889422591973857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06239624401351	3.99775004050922
Merged-chrX-38466248-1	3.21075342714757	0	1.32938365856532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145347048-1	5.37396552538625	-1.71181498734008	0.919818849508188	-1.86103490731393	0.0627392473195369	0.438336240280387	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82676406109699	1.64143129445672
Merged-chr11-79905575-1	3.04321942359229	0	1.34090276956655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-5289588-1	4.22136413214292	0	1.35179421674875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24965567-4	9.99917446072495	-2.8365636252552	0.776389097554025	-3.65353356221983	0.000258655961081206	0.00665375628431034	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82660188373831	0.989878296978726
Merged-chrX-12007292-2	5.70121273182743	0	1.30911883890602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103587517-2	3.65973714941912	0	1.36006373094257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112264278-2	2.67242665308747	0	1.90729864802548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95192241-2	3.00422569834045	0	1.35891093673441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15201049-1	2.59242300532196	0	1.40556584031105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40475915-1	1.52471008554797	0	1.67652506132763	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130715325-2	9.01279056725387	0	1.28854331899646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8956035-2	6.6881095525694	-1.64768933653139	0.640610692595986	-2.57206030991202	0.0101095279039925	0.111855267594699	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19565147956414	1.96819405909084
Merged-chr4-154924218-2	7.66698236913849	-1.13860000055695	0.694677608541927	-1.63903368491577	0.101206244553568	0.626627179893636	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37977449590415	2.05271282077275
Merged-chr18-50045031-5	11.1419545563671	0.0820783569018888	0.516993202448404	0.158760998235911	0.87385717790535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23937242192351	2.7416333111364
Merged-chr17-43579905-4	9.52497730902384	0.730166957884294	0.649417214991294	1.12434185763628	0.260868027518385	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1413980196967	2.69949531895937
Merged-chr13-24684683-4	6.65226527970092	0	1.30808715800362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11016320-4	8.58877130064559	0	1.32208807977343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83850958-6	14.5469555524489	0	1.28161628055543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46488743-3	4.75784803526782	0	1.33927170111044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61324279-3	8.23113606842801	0	1.33332783330306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35317229-5	14.749130149532	0.0394314295700074	0.518665450973831	0.0760247853331509	0.939399379413625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31573298238573	3.22387126728601
Merged-chr19-42714010-1	4.17624547736656	0	1.35010062436658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70812098-4	5.06939760649378	0	1.30647506325829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135871159-3	5.14643663755911	0	1.30301536165307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156452170-2	4.87643177054977	-1.33236909874446	0.887058862810611	-1.50200753817272	0.133095162040786	0.762982407116171	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87564441007113	1.88508609669565
Merged-chr16-11352112-1	2.94862354869098	0	1.34538584885668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101984085-1	6.32096939718274	0	1.30536039828627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97484379-1	6.69893207877681	1.31334459159872	0.757597655498495	1.73356475177388	0.0829953391621292	0.539374781987916	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83154186166105	2.77057152405559
Merged-chr13-98809260-1	2.60384586463591	0	1.35833182103651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6569936-4	6.97504531616495	0	1.29287779088999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5495698-3	7.0871110448902	0	1.38697709116353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78671646-4	5.54119466415818	0	1.33566151365427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34259328-4	7.27177996958957	1.43209470093428	0.995295139737588	1.43886435666897	0.150188957987026	0.829747011212393	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	0.905469781553611
Merged-chr3-95673363-4	6.53858948597119	0	1.31982574940775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87122416-8	17.8910251865106	0	1.29093116928195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140141528-4	4.25133513060627	0	1.31374604830113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116472766-2	4.3084258998574	0	1.32160893626392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36318811-4	7.80942862159182	0	1.29726790908605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134509171-4	4.79560380701069	0	1.31633609268857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79251067-3	4.69110944764215	0	1.32439311165403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23172487-3	5.97947810769658	0	1.34271772607649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66888140-3	5.07802657285671	0	1.31296423880718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45105856-2	6.60070598165829	0	1.31891506434352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20240688-7	24.0751969347436	0.210919375902885	0.37356802275556	0.564607683353289	0.572340638073805	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05960426085029	4.15191187047571
Merged-chr14-27378514-5	12.5458949779248	-1.61850801545818	0.600161571516569	-2.69678715244682	0.00700120051776519	0.0841302774979559	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87581136241264	2.08364730863447
Merged-chr16-21353817-2	4.31756427025303	0	1.37457081606283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109143580-2	3.70407185295987	0	1.33428276452823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157458624-7	19.9351245874595	-0.378213138546822	0.419741754643077	-0.901061508327738	0.367555617138666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38097641770171	3.92149536290682
Merged-chr12-105981576-4	9.20920712615795	0.108360701326541	1.2994047402376	0.0833925704370812	0.93353939586834	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr17-36024220-3	6.4171012270886	0	1.32274642149465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76201473-4	7.52355296496888	0	1.29940202593314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-39003590-3	5.6200252898419	0	1.32703655971747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120288634-3	9.61340214785411	-0.704660919609854	0.452096592298197	-1.55865125199853	0.119078945469436	0.706494713151057	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46570808579668	3.49869378155033
Merged-chr5-130129570-3	6.78584487823296	0	1.31579841433832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90738948-3	20.7934908684982	-2.02243581049126	0.574910893429528	-3.51782482051572	0.000435099488640734	0.00990317352306422	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42111827986326	1.60978507060531
Merged-chr11-45967098-2	5.79637338622577	-2.42043568785061	0.881303684544215	-2.7464263798039	0.00602484061893652	0.0750618179380412	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44673546687519	1.04885222765555
Merged-chr2-130256893-1	4.31367142088076	-0.992988335243412	1.26281736605346	-0.786327747730206	0.431675500452194	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92281507342138	0.898163539755574
Merged-chr10-40353866-1	1.91368343017817	0	1.37282876958781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52442250-1	2.40670332565067	0	1.38051414197961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55195916-1	1.94692334051522	0	1.42314242152945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118998769-1	2.32084886091067	0	1.35583935495519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6647204-2	2.6650643863579	0	1.41388988649291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37142029-4	7.94234401120054	0	1.30391067418597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160603513-1	2.58475091041106	0	1.36663083335409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36588179-1	3.75237723340059	0	1.33459675992285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27278375-2	3.4171836332779	0	1.38512726231664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124643618-1	1.82200810460469	0	1.42281061177493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89908144-2	3.41258587236459	0	1.33213843985558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73476394-3	3.26025732589137	0	1.33422351039019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60839020-1	2.18677656541779	0	1.41499233069219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64818586-3	5.84087244449829	0	1.34646876723323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74624648-3	5.3464825306048	-5.01079138763173	1.03036895361441	-4.86310400760278	1.15559085321362e-06	9.00038616139422e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81851749726157	0
Merged-chr9-108474783-1	3.84849848614084	0	1.32481908569059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-52784127-3	5.19445428881958	0	1.34087944558799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56637362-2	3.71971543447054	0	1.36973176035934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97667472-1	3.64053921719741	0	1.32276493783569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39602135-1	5.16909016465123	0.454000520329274	0.719573075150288	0.630930389153947	0.528086040736571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89510451779285	3.11162528359824
Merged-chr1-166799242-1	1.56122871470592	0	1.51555390498151	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106385470-1	5.53924905404443	0.574958033687015	0.74981501121615	0.766799844076836	0.443200529103633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29094046131259	2.48586599042228
Merged-chr19-60731065-1	2.41585578671361	2.25447142362047	1.40513243933057	1.60445475495145	0.108613849952768	0.660292179645881	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr12-55485167-1	4.96624430393822	0	1.41378011578804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100885781-1	2.05698228841882	0	1.45467057603807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79089542-1	5.07342581264762	-2.15637461248066	1.07033384956882	-2.01467477960204	0.0439387364443881	0.338507506684153	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5823563794697	0.733321818366247
Merged-chr7-84212182-2	1.99345806701016	0	1.57011337150014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136394688-2	3.87516952793175	-0.222215928698475	1.066269700074	-0.208404992360801	0.83491275856901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29250132971819	0.683637474991079
Merged-chr1-60860733-3	7.68265815059894	-0.399370445251712	0.613472210177005	-0.651000059377558	0.515046448556877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84855570503106	2.09296523225154
Merged-chr16-55808435-1	2.48464311319494	0	2.04174523563044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27242306-1	1.30770546235245	0	1.47386960917071	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98703800-1	2.5983652662161	0	1.35446218555073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59889554-1	2.040079868381	0	1.42487027188746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108472009-1	2.11115342857444	1.15212678906887	1.36673852395703	0.842975279377647	0.399242269538416	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.11548603074465
Merged-chr15-8776856-1	1.9908371607273	0	1.44007620753708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-146946568-2	3.53490339793125	0	1.33740480465831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136253070-2	3.70678789555667	0	1.35223799406858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109872517-1	3.48535051339024	0	1.34855908974911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122698849-4	7.17884382451733	1.58306379492765	1.01660160404187	1.5572115847876	0.119420258788868	0.708069706089954	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.14490468848716
Merged-chr12-51679942-1	2.63395154976017	0	1.36018101333461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157838431-4	5.90127724213816	0	1.33385509827768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156540777-3	11.1181974172266	0.590378243343012	0.533941553525513	1.10569825375991	0.268857146109037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14970926296281	3.15248328572817
Merged-chr4-129036044-6	12.0943111575744	0	1.28801872613051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100721399-4	5.48198374103508	0	1.33495977099257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61001894-4	14.3345077320484	0.503994073057046	0.457418906665504	1.10182169060537	0.270539198521936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2588190352769	3.14958237393725
Merged-chr3-95629969-3	7.42830455071084	0	1.31934692829162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21383683-2	4.43610940566305	0	1.33314908889657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154687035-3	4.78963473071612	0	1.29828559758849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43412959-3	5.12490743762118	0	1.30262271050645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32500287-4	4.08261616294199	0	1.32293781771594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59719569-4	7.06135607916751	0	1.30149280257812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10461700-7	13.1559246131139	1.81831985368624	0.606009518345095	3.00048068329314	0.00269553850299043	0.0408778507812515	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17162139808024	3.62176953116098
Merged-chr13-92680240-2	4.45451413458285	0	1.34394714123708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122108278-2	4.92779955709309	0	1.33127906721994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77393677-2	2.618956070598	0	1.43189784618105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35096257-4	8.70454722269073	0	1.29284464439724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66785612-3	7.07587807607165	0	1.31556725082587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83921405-3	6.08668920027645	0	1.31943046324244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99154397-1	3.29138211486948	0	1.3512338188955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-76266860-3	6.86216711879975	-1.46590646282387	0.960116305160023	-1.52680092499788	0.126810521525797	0.737632218232572	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0742296748262	0.683637474991079
Merged-chr3-90574825-2	6.88147667531327	-1.86419023972608	0.75414212653251	-2.47193489680451	0.0134383986520894	0.138356010448942	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40720824493914	1.20440436174322
Merged-chr3-65882252-3	6.0110692161916	0	1.29998866792049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120358086-3	5.02917167448452	0	1.30526923633536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81301334-4	4.26831493395436	0	1.35144646885722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75175189-6	10.9520858463756	0	1.29167076149867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96256730-4	10.146680052038	0	1.29020283406259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125283271-1	6.130967935086	-1.33583205621371	0.819190702049991	-1.6306728736921	0.102959363322933	0.635314688923548	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89002597647903	1.76331258957479
Merged-chr5-43423224-4	5.29477986210213	0	1.30396585517067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95301533-1	3.45729277086682	0	1.328128077859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155902108-4	12.8532756099729	2.47451021897223	0.744522585064893	3.3236200870341	0.00088857156465939	0.017343069732447	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40027823345619	2.27516951250108
Merged-chr2-129410507-5	14.8952377580195	-1.24235429819493	0.579132064000385	-2.14520033584966	0.0319368327789078	0.268936117882798	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.88768151442573	2.65706852276151
Merged-chr1-52802938-4	14.1553366044992	-1.33800973903974	0.437639395920318	-3.05733384954071	0.00223315405031979	0.0352652693504584	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54526527052591	3.14612127301446
Merged-chr3-152355467-1	4.12677544827468	0.867705794519416	0.774455357370365	1.12040776303192	0.262540038320053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49984554318181	2.51378799049974
Merged-chr7-55918958-1	9.88584538031048	-0.209241526527446	0.658827718633575	-0.317596726138691	0.750790857826896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15050214206438	3.46653724581267
Merged-chr9-109200559-1	3.16272578200936	0	1.31211522575125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81925134-3	3.53004913864409	0	1.34507006599814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8429169-3	4.87226393662606	0	1.31900234173012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117884597-4	7.08434960169132	0	1.30340276859196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39646660-3	7.25871060047006	-2.31244156626553	0.885601021371899	-2.61115503534909	0.00902369751958186	0.102545949625067	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05827418092869	0.958904680953568
Merged-chr5-91957046-2	9.26821036684701	-0.468385814804642	0.494940933726088	-0.946346892907949	0.343971683032289	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69562812927217	4.40088322335667
Merged-chr11-107595016-2	4.195787881374	0	1.32392670571378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105749254-2	2.21846410828852	0	1.50463497109417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71757132-4	9.47712266304568	-3.6531681262352	0.831701233013202	-4.39240436496649	1.12103947271692e-05	0.000557075630297794	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21112317918162	0.73596151290311
Merged-chr14-60205228-8	22.8008598089451	1.192194807806	0.326318546974094	3.65346934417628	0.000258720690236161	0.00665375628431034	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83631127443031	5.03100184239549
Merged-chr10-20398390-3	5.70878627518282	0	1.34317994918715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43520105-6	11.9509475734354	0.409259102875976	0.383558503624271	1.06700568233753	0.285969270004028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80032949403759	4.20155138968866
Merged-chr4-126536657-2	3.55934247098993	0	1.34247669352617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12537406-2	3.42920866756579	0	1.34488492997414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137609922-5	16.5562314818637	-0.0158213865701518	0.482759156308025	-0.0327728358197249	0.973855740448001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44455875729006	3.5699938365179
Merged-chr17-67450656-3	4.82701439595747	0	1.3077995614775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40809879-3	11.9374920587223	1.96040099086251	0.538026307818538	3.64368983890597	0.000268757259688	0.00684419793124399	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25700923246145	3.71843027597182
Merged-chr8-94954951-4	16.2217997711474	-0.227097727511302	0.467045011051667	-0.486243771237242	0.626794340576644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78251014039157	4.19200949418603
Merged-chr3-142526983-2	2.79721103814112	0	1.44948400308184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80639332-2	9.24170116390287	0.333321617535662	0.507854674357544	0.656332676187981	0.51161009744519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41633464821441	3.70839166142503
Merged-chr15-62469996-2	3.2109105526353	0	1.36466649567972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110868528-2	3.15666931660693	0	1.41465611847764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173802778-2	3.3222939373878	0	1.39067377719334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56884512-3	5.73621841539614	0	1.33017952864622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-46108328-1	2.66643763826427	0	1.38308589725101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53115539-1	5.9731345613472	0.58415819992603	0.933657211876775	0.625666671338397	0.531533598250019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37549554204329	1.578845274708
Merged-chrX-73798634-3	3.94435097890945	0	1.30726472288201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39527640-4	6.41205774094465	0	1.29124238287585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87757157-2	4.67022660729416	-2.65545346644977	1.1456254848036	-2.31790711857724	0.0204543694915619	0.190548555835862	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66003505184625	0.469435083901436
Merged-chr10-95918953-1	2.02273540990991	0	1.38657430577399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-153623371-1	1.99293517002096	0	1.403483322809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56338636-1	5.00408767929067	-0.597971303063376	0.819559340519253	-0.72962538952276	0.465619198368569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9430808667192	2.71118429411573
Merged-chr12-39038987-1	2.74694706324456	0	1.36439701532479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74434708-2	4.32334655650741	0	1.31634299714391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82914748-3	11.8994243534853	-0.945329502882632	0.513674364734688	-1.84032836322461	0.0657200436842999	0.45358491493391	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56780562066778	3.49690686312675
Merged-chr11-61950862-2	3.73216375192879	0	1.36137787861191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69071224-8	26.7679496863468	0.155473360507983	0.349860823153368	0.44438631083832	0.656763308847754	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41486178155786	4.5506781059279
Merged-chr3-107274041-4	5.83258581057318	0	1.30452207581186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16056702-3	10.5518676872523	-0.910045176668981	0.715225446254525	-1.27238926052573	0.203234847939365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53001021036673	1.24302299519605
Merged-chr2-132601985-3	5.95220140198742	0	1.32022473059963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70414169-2	7.08894571560591	-1.72595728346392	1.17727939996417	-1.46605579229234	0.142633087922095	0.799494061018803	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09438939399008	0.423054662900563
Merged-chr8-83736148-2	6.28051252787412	2.33658713316767	0.815078991594993	2.86670023060624	0.00414775685720387	0.0564902608304299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	2.88854826306555
Merged-chr18-39249194-2	3.74477541377286	0	1.31745088288355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96322771-2	4.30946635565409	0	1.3564415844574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122509308-4	5.42968668807337	0	1.31851222938979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146100173-1	3.52890613959261	-0.958309072609222	1.04845540505072	-0.914019869603196	0.36070640519859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4720922268329	0.869764003783424
Merged-chr15-69078175-1	5.98053261216534	0.844808205317073	0.624665435401487	1.35241708191217	0.176241927930968	0.930254226819484	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18496031820434	2.83216237702095
Merged-chr1-152542004-3	6.56322725493229	0	1.30207551245415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132514955-4	12.6815569640308	-0.0915940689798237	0.44499243333458	-0.205832868423082	0.83692146560692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41609935017278	3.20613844154895
Merged-chr1-34510824-2	4.00741530854952	0	1.33810199486708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69431185-4	8.49789703628687	2.33208632752634	1.13630938826334	2.05233394321466	0.040137219405981	0.317070447207838	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.15637648126681
Merged-chr1-87824617-2	3.29820817276581	0	1.33739664220247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40832147-4	18.2305624633373	-0.803668809062822	0.60457488885827	-1.3293122553941	0.183744972650039	0.958719177801778	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99820616910263	2.3672819949028
Merged-chr18-5749354-4	8.33838005654305	-1.54901967285805	0.661708929955707	-2.3409381417321	0.019235353813398	0.181922453240951	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.169634504075	2.54646549013652
Merged-chr3-142443538-8	19.0660522196614	-0.241892092973266	0.365745644628869	-0.661366981468008	0.508376995471438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53277681178764	4.3029686847933
Merged-chr15-51927628-4	7.84679200809731	-5.65879758129572	1.02034548510465	-5.5459622881708	2.9234183559084e-08	4.40169806187075e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43306349235706	0
Merged-chr19-18624461-3	5.13885350534408	0	1.34245666129847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96910212-3	5.00626478048107	0	1.32156793958623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63568143-3	4.36955517100491	0	1.33609100302479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84773101-1	3.777683089376	0	1.32906103319012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75413110-4	5.24336591833056	0	1.33249282329048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-130188618-2	3.71870014068293	0	1.33268039163781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78769804-1	2.30426276172348	-4.96612634077111	1.13340833263535	-4.38158622781968	1.17818398189537e-05	0.000578289862395019	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63560144204936	0
Merged-chr19-53900184-2	8.46618308967856	0.601991419611362	0.648608388826653	0.92812771154622	0.353341326502279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90652891549611	2.53128134672186
Merged-chr13-101914904-2	2.68895103657086	0	1.3607848919961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117137343-2	2.89131396071819	0	1.44019189971463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50443920-4	9.8994244773247	0	1.29019309674238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63704885-2	5.27379208665465	0	1.3582516587003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53594547-2	5.71472909076487	0	1.29584789843047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86697033-4	6.97193770938329	4.87246311294273	0.988729253488835	4.92800541275555	8.3073316402485e-07	6.96856089041949e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.64751895429196
Merged-chr18-65380370-4	14.9898313476565	-1.09710901858384	0.462845652963136	-2.37035610372519	0.0177709599294702	0.170949675776706	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.57540907654088	4.41532032691146
Merged-chr8-125950455-2	4.94279713918419	3.23985272435789	1.1014468616439	2.94145168249192	0.00326677802231784	0.0472976125646019	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.48233004913473
Merged-chr16-73098965-4	15.3406354605003	0.621459394738512	0.534277116357087	1.16317801326748	0.244757285188589	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29276066303658	4.24719972973917
Merged-chr2-103504615-2	7.77621102177736	3.22334451679613	0.835142298124484	3.85963508737964	0.000113556469696823	0.00350021748528707	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800023534112536	3.53232159410961
Merged-chr5-32690071-1	2.01708169905848	0	1.37148497238817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36876079-1	1.64550505492189	0	1.45292850688112	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54755582-1	4.31987854045282	0	1.3246754836999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86218742-1	1.66281505325217	0	1.5524774831418	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77522597-3	7.11739069949693	0	1.31002533925694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83646890-1	1.05120100120833	0	1.60528420752647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-129645297-1	1.5605100979565	0	1.58013669448461	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70958210-1	4.54143973048098	0.518672338224672	0.643688258853754	0.805781884461114	0.420368625214773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68775606091071	2.64745166377745
Merged-chr17-63871863-4	6.26815023622797	0	1.31148119226032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66980068-2	3.28025040289669	-1.31799268979144	1.33807533673826	-0.984991392939223	0.324628298770183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0
Merged-chr3-131085503-1	0.971654257729283	0	1.84030867404275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21994067-1	2.1995598289731	0	1.3773983378641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30262885-3	4.47959858860689	0	1.35936013186008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174453903-2	4.24969363311161	0	1.32302932960228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9000496-4	5.38169636063072	0	1.31183301035604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17912899-2	4.26142705804755	3.40795999217804	1.15442685121976	2.95207963031803	0.00315641520373218	0.0460811233027442	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26857811924232
Merged-chrX-101927634-1	1.77918817889465	0	1.65322589801977	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32009013-1	2.0232860309006	0	1.53949441774213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59761071-1	4.87196897221147	0.949094031018815	0.822250640914373	1.15426365610781	0.248392091904308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31189096997788	2.09032553771468
Merged-chr10-94357623-1	3.42843233130567	0	1.33368683715192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52905958-2	5.5743825301667	-0.52388000093922	0.938972517119044	-0.557929003658796	0.576892865307377	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58499890165656	0.666688015277142
Merged-chr12-77293154-2	2.55807207274499	0	1.53236940845185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62534027-1	0.989369849174265	0	1.70084242556335	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6696491-1	2.31937129439188	0	1.40065622192644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57756869-2	3.422339869611	0	1.39385783095205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-56575604-2	5.00600049056727	0	1.39327804189204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25970044-2	4.63678187234283	3.48657418322667	1.19172154903021	2.92566177565887	0.00343724410051026	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr10-75105823-1	4.21181652004042	0	1.32901101507251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117981320-2	4.30977579504492	-4.38752782442855	1.08583679161885	-4.04068812025357	5.32945947061601e-05	0.00191245941003226	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22288557976761	0
Merged-chr4-89393499-1	1.71986730137291	0	1.68528380370379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13524354-1	1.70900372815632	0	1.73670889741356	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13614710-2	3.64749019473536	0	1.42514625330579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88204466-1	2.24970441455667	0	1.35506677527846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69043623-1	2.7958195251475	0	1.36649732313178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29383527-1	2.98443143711899	-0.21992272460185	1.2655709281228	-0.173773527595216	0.862043449752507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0.306240821987646
Merged-chr4-12305421-1	2.44481036729362	0	1.37096857743368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22122246-3	4.54660904249045	0	1.31009054018643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128578449-1	3.51740923566591	0	1.35683700741743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69553234-1	5.51131810692391	-0.689065917986583	0.765696680083523	-0.899920211109469	0.368162713511836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57575931887553	2.56120239685585
Merged-chr2-165819688-3	5.41167642391153	0	1.31484485839796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60526399-4	10.3548034888242	0.512373806915647	0.711417781027137	0.72021506993526	0.471392586710248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97402654964682	3.00559090438206
Merged-chr5-104942979-6	20.1499903849755	-1.49533721323139	0.498008049562185	-3.00263663317489	0.00267651795829115	0.040693285831199	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2168849871038	3.07068206082046
Merged-chr6-134049170-6	18.7867537758421	-0.00902747814194017	0.410057807460325	-0.0220151353728672	0.982435882182461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06598855783592	4.06766830513897
Merged-chr7-45708341-3	6.84018261238729	0	1.29954364407064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144197879-3	5.54663794030717	0	1.30761923564093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67201972-5	15.2409416489648	-0.399120410303101	0.499371220728742	-0.799245919139386	0.424147830646397	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32097201027907	3.82808357397756
Merged-chr10-84549277-3	6.77770556501104	0	1.31055480032159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75553321-4	5.46112953344747	0	1.30674936990115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39482319-4	7.21192470818246	0	1.29207770484847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143119089-4	5.24788656731255	0	1.32628509662212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79114417-2	6.83658596836674	0.328442675680724	0.811625770206173	0.404672556906727	0.685718217052377	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51387577754861	1.40264952818025
Merged-chr14-62874547-2	6.50947243053161	-1.18216557185165	0.723860171131716	-1.63314079016587	0.102439389403113	0.633002774462018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49352503135309	2.1552264446993
Merged-chr13-17773284-2	4.3809408469262	0	1.33977992905624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128399701-2	3.92388433980457	0	1.31752200201329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70915338-2	4.10124547235078	0	1.31154732548955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41601884-2	6.09514968548814	0	1.33001180863717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27859497-3	6.51195425990084	0	1.29900374375245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37299021-4	12.0706893283512	-0.601260422440696	0.576147089536567	-1.04358840539198	0.296675859571187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46877209795991	2.52863192190685
Merged-chr9-60758057-1	3.49679664232315	0	1.35234206423859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111044703-5	15.6177565905106	1.98714663359175	1.05109395938603	1.89055090255917	0.0586843195187544	0.417278078702124	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.735627456805112
Merged-chr16-91538702-3	7.25895949522974	3.56838481364363	1.06965249141075	3.33602253282966	0.00084986275183111	0.0167526791496699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.69686753743604
Merged-chr11-19919589-3	13.3257547981348	-1.17085362839193	0.468137386798945	-2.50108976853581	0.0123811790724671	0.130407296287863	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29647189052081	3.21287904171808
Merged-chr2-159992444-2	8.15533415290995	1.26661123069637	0.733825933532156	1.72603770569914	0.0843406295373983	0.545729555178813	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53216913661233	2.5646301976401
Merged-chr18-50003934-1	7.30267820001571	-1.07639368070267	0.556685992788028	-1.93357421355585	0.053165500277858	0.387351185322434	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15604191829849	3.27536759916832
Merged-chr8-41010993-4	11.2283059467168	-1.0559584328268	0.561764665233876	-1.87971671800892	0.0601466958945283	0.42444317899322	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63841689174663	1.75395548195819
Merged-chr8-66323210-4	5.36644615755121	0	1.29754948253188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72261284-8	20.6294520905758	-0.1602612819926	0.315898602728354	-0.507318742813214	0.611931189693166	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77169498852478	4.54762291578975
Merged-chr19-11559830-7	20.8114172127145	1.79321147395808	0.464571855762426	3.8599227476128	0.000113422876763421	0.00349774955402666	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18496092152791	4.83928948763501
Merged-chr18-38246238-1	3.02020892180162	0	1.35637320105446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96946764-1	4.45647824780731	1.64724759135488	0.956506694341838	1.72214956894613	0.0850424276633248	0.548591148338333	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06867845393233	2.35915318132375
Merged-chr6-114908169-3	4.46650886496638	0	1.31992408521126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84318795-2	4.69727983050255	0	1.32686423972241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33913088-2	6.93933405255413	-0.308636910943869	0.564621013918039	-0.546626681146996	0.584635234803641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15143138507498	2.81284203275462
Merged-chr8-110395917-2	4.41017512657591	0	1.33734899988064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123095514-5	9.70383505237047	0	1.2846419052558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41085373-5	14.0047586616092	-0.0839557897557963	0.496545782281829	-0.169079655394484	0.865733987170379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83230814554173	3.7239411649679
Merged-chr9-14523839-4	4.33553219795784	0	1.3187785085982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51535498-4	6.97697950324832	0	1.30923309872163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118947343-4	6.94197884586231	0	1.29352376595981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9060261-3	4.80136139797815	0	1.31439031793572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10835800-2	4.03119900034606	0	1.31529659156226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3715441-8	16.5096837340634	-0.0898990805400128	0.458580084790034	-0.196037908146783	0.844580495209247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79399925811023	3.75419851948463
Merged-chr15-83037899-4	5.62020421684108	0	1.29584811511476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116166495-4	12.3071163333857	2.04779229812826	1.05890339685387	1.93388018606088	0.0531278607992904	0.387143138957421	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.20539659680455
Merged-chr8-56304324-3	8.22006399648814	0	1.32587389391428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76196781-4	6.93019426988044	0	1.29771919115868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43924136-3	10.6105611723436	-1.68550354972988	0.57325555179471	-2.94023066057193	0.00327967998119573	0.0474250869774764	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39899150342622	2.30218944138379
Merged-chr19-32985222-2	3.55849952603012	0	1.36998961510917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124704102-2	3.66408986435664	0	1.3628058692044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5566235-3	5.44700682232085	0	1.30116800475417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125584294-2	5.19171240607291	-0.619848352779562	0.974373885131686	-0.636150416424379	0.524678387435738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74560366480849	2.03951848988522
Merged-chr6-119483151-2	5.2781897762247	-1.29988071738289	0.913729051045222	-1.42261069175369	0.154849042841738	0.848676134658745	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93531688549684	0.733321818366247
Merged-chr14-45666100-2	7.60133367289516	0.481738378110894	0.756524122012945	0.636778609027156	0.524269061432957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25442070639525	2.46976107568881
Merged-chr15-83113031-2	5.61126367740382	0	1.29453779243514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32442250-2	2.26904438290223	0	1.39933936186556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3847131-2	3.57851671234113	0	1.411190509571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53721209-1	3.41915951339123	-2.09921870069499	1.32814789634409	-1.58056094993139	0.113978460474128	0.683619685924034	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40689551111519	0
Merged-chr13-51388325-1	2.24724185869543	0	1.3642523591624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56429287-3	7.50149061543139	-0.0997117832370569	0.540114248629874	-0.184612391711567	0.853533065834511	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53658606650808	3.44846862147826
Merged-chr13-5870985-4	13.2467842229304	0	1.28907201516564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106663969-2	8.77989805701255	0.0920278877520179	0.665061802567689	0.138374941090759	0.889944100592437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81583538147918	2.97610527019784
Merged-chr4-141573574-13	43.5854829929052	-1.28079038737558	0.380445561155922	-3.36655363643645	0.000761137788187008	0.0153462850684567	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.76870941817796	4.3761079026915
Merged-chr6-145710081-4	16.9898352505738	2.20075087332805	0.602904146818199	3.65025001891664	0.000261985173475912	0.00670571216057852	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46027239484689	3.44237115780607
Merged-chr15-76825748-2	5.26498539923516	0	1.32421632523399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140688525-5	11.0958540564935	-2.81031033751846	0.670955524102821	-4.18851956137676	2.80780112020161e-05	0.00115105754078228	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28078743103642	1.31734301959449
Merged-chr14-47393762-5	11.7339220345786	0.553089171922803	0.458539481228739	1.20619749130588	0.227741351011345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2889430358471	4.04388944243468
Merged-chr19-44373154-4	6.27949856553231	2.81939843822421	1.12852540126591	2.4983030378063	0.0124789467178339	0.131101165952344	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.00443616959195
Merged-chr9-40666396-4	16.513031846902	-2.24286689210971	0.502167144113569	-4.46637522665653	7.95560258805654e-06	0.000420604212555941	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.14048938885354	2.83045305892928
Merged-chr19-40737298-5	16.3345487117927	1.48483683125205	0.523455500377874	2.83660565259162	0.00455958898454537	0.0605591263788825	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70721250791171	4.63911079175912
Merged-chr7-125482490-5	18.1094178151383	-0.528349581524294	0.51863751825469	-1.0187261101015	0.308333013261539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33963835694785	3.71759971566554
Merged-chrX-162915868-3	4.26069270488141	0	1.31394025818854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94354278-6	13.6784532131708	0	1.29925556645936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52956635-3	4.35475059400924	0	1.30373682442317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85729579-3	5.090958468563	0	1.30034099516205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120002250-3	11.0022688482203	-0.63031200864079	0.488705994003705	-1.28975706534103	0.197135019322127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.209992362561	3.61309561208084
Merged-chr9-113729172-2	4.39415048270185	0	1.30173444201076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88719603-3	6.90311914267069	0	1.31433218764648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19587833-2	4.45499540014782	0	1.31385106930209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44630642-2	5.27523086493438	0	1.31879604285113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27209216-2	4.56904944636852	0	1.3751412371004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30718328-2	4.06769606653176	0	1.32644080298763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82526291-3	5.02581102630138	0	1.36516055952737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37702969-1	4.04337242164467	0	1.32769297302532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-5445940-1	2.59559340212476	0	1.40539363057668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4491484-1	2.57492038337917	0	1.34728665253555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16977561-3	3.65566407000954	0	1.34849407955744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172515462-7	23.0802015393234	1.31352345135284	0.370225387413509	3.54790215908599	0.000388312439759073	0.00907210035341308	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91792188007001	4.67882291157156
Merged-chr12-4539686-3	6.63817297725695	0	1.31045933672222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50312809-4	5.69229805671659	0	1.3054545119415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26827660-3	6.36786728858188	0	1.31436716702725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57017573-3	5.89563647782849	0	1.32147600695947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77566839-4	6.44540384486541	0	1.33960396885107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82899763-4	62.854859040663	0.882811998583035	0.297857736778531	2.96387130356611	0.00303795311100559	0.0447112801783268	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06800473383753	6.03178317260556
Merged-chr13-45693674-4	7.48737204880418	0	1.32333553089822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91328704-6	17.5225351445132	1.7169809177943	0.410916412642724	4.17841893136341	2.93542590488892e-05	0.00118994008176719	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7155053496528	4.90181832016649
Merged-chr17-24159090-4	9.52384600200568	0.217485255370422	0.613453139580006	0.354526273220024	0.722944517808509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50384919816538	1.8460126076219
Merged-chr13-106829793-2	3.7864640750853	0	1.39274382269823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166305000-10	24.5094578534145	0.89505858747537	0.38223007265177	2.34167495316574	0.0191974260807382	0.181650015156664	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48819816170233	4.29219306312538
Merged-chr5-20816056-2	4.35840852480699	0	1.33836238569841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118905616-4	11.184513482316	-2.02972038921339	0.90166227504037	-2.25108718130911	0.024380016151385	0.218417402718454	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69734993910374	0.683637474991079
Merged-chr9-40482525-6	17.9174760696612	-1.56070237038834	0.522748441197854	-2.98557058690039	0.00283049804010373	0.0425101643136332	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09585986468202	3.56564196299717
Merged-chr2-120309412-3	6.59975942839285	0	1.3087594670139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93345996-4	12.0526707915526	0	1.30564272641958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-33901071-1	1.47458604440918	0	1.56140559264229	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115583432-2	2.72968912351776	0	1.35675923149394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37495776-1	6.65492562723497	0	1.29535300895699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-56902983-2	3.61932786898756	0.20212791304244	0.869696977145632	0.232411884086144	0.816218119445116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67370924368084	2.18210741161866
Merged-chr4-139708597-1	3.53772291817576	-0.97312388013161	1.26551812047276	-0.768952940609087	0.441921247664446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08190510499904	1.11548603074465
Merged-chr11-19027414-2	5.43123962230924	0	1.32208657093018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-49209556-1	3.74846540391115	0	1.35100648252815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21488756-1	3.2417499241563	0	1.35669890047005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65960114-2	4.38271174310653	0	1.34586679179664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79016879-3	12.6282997920973	1.09340201829043	0.515816509465933	2.1197499463957	0.034027138459489	0.281496061498135	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45401380190036	4.4604586112013
Merged-chr13-81055741-1	3.49582005331353	0	1.36206677648924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87849122-3	3.82865983934375	0	1.33146124298822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90236894-1	3.08547323259619	0	1.31972046172278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-164066405-3	4.62585459357633	0	1.31748989089367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113434843-2	3.11396713571411	0	1.41101360056836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80454171-2	4.88266645576623	1.27346695649403	0.894660337678017	1.42340830688791	0.154617825798593	0.84783556638708	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09358799995118	2.06415190125929
Merged-chr17-67318020-1	2.6256928266453	0	1.39973996925516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90570012-1	2.61691467878858	2.50773034315901	1.28091113148342	1.9577707473389	0.0502569194066113	0.372134691846394	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr16-95955469-1	3.08247808548422	0	1.36090360150198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110563476-1	5.20483941752599	2.06432830328401	0.795424862125555	2.59525242619102	0.00945214713886959	0.106189659047184	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56715307358762	3.46967715556574
Merged-chr18-9820677-1	2.03271965398464	0	1.42917104165441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25123779-1	1.86328044846668	0	1.49218633421043	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-38012740-3	5.56413588409946	0	1.30249429631088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-36836125-1	2.22102465650006	0	1.35782171109323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46547466-1	3.23827100344334	0	1.34303453189057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119715388-1	2.18821511580595	-3.49222924674481	1.17204059246247	-2.97961458775724	0.00288611261453491	0.0431569599335007	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1059955528411	0
Merged-chr8-25110198-2	3.34781311240745	0	1.32623049927938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167716133-2	5.67712980266201	0	1.30538542613186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134867502-1	3.4532273103772	-0.438686977553357	0.857622468378956	-0.511515257269956	0.60899030764271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06806297447104	2.92435819090246
Merged-chr13-105205288-1	3.99271398225113	0.253276125857131	1.08410577051117	0.233626766637086	0.815274745953753	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26615546658367	1.84022605426951
Merged-chr19-35125867-1	2.41557961931058	0	1.36626047071362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95330861-1	2.68734722737361	0	1.37057466080543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55718861-3	7.57579569705522	0	1.29871877101283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76779325-1	1.44823864998501	0	1.51400470997605	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68127068-1	3.23998747145883	-2.29509218544737	1.19924451396917	-1.91378168397973	0.055648056770466	0.401056349147774	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44144756807786	0.581381506691384
Merged-chr3-20026133-2	3.71843559061417	0	1.35009152429389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96692744-7	16.7045631632814	0.668848171568728	0.413942443048612	1.61579993257705	0.106137576150419	0.649346133426202	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7337061789402	4.5539080392558
Merged-chr2-122156192-9	32.5707643248457	0.319571837409657	0.308219286504807	1.03683270775683	0.299813829418223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41583093358704	4.75582410271265
Merged-chr7-129301671-3	5.3922853180299	0	1.30852535676356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30123460-2	5.20061317978515	0	1.33422319819059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133201321-2	13.8499119973196	1.97980754121228	0.557491759260885	3.55127678270453	0.000383367026552322	0.00896297020289375	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04694791318193	4.13424513608153
Merged-chr11-85715244-2	4.39170148205906	0	1.31445370502129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50545833-3	6.33023647485473	0	1.29377256319342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74958359-3	8.62192269635108	-2.50022044127774	0.810555205707831	-3.08457761256913	0.00203841417483692	0.0328650907152464	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75051478858931	1.08764913775046
Merged-chr9-32676285-2	3.76554058889438	0	1.31730201871453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157445135-2	6.99729781210687	0	1.30901041597413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12567169-3	4.96439586065814	0.539317421344937	1.09862144433173	0.490903781395776	0.623494502435453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	0.851599296279844
Merged-chr16-89909639-3	4.40354571953998	0	1.31024580756119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182255239-4	6.85332773487548	0	1.29550145726152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144000314-3	12.0794970041688	0	1.30775070253738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153083495-3	8.79814867550688	-1.44529614711095	0.671160938168703	-2.15342709165184	0.0312851283309128	0.264744625215207	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56407969459964	2.04585323093051
Merged-chr12-21208353-6	19.3188375748547	0.959692736167128	0.2996692635018	3.20250640640481	0.00136237269897112	0.0240739876654858	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49153275855664	5.35818887014665
Merged-chr2-12115720-3	5.81261347409453	0	1.32714261676724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94995686-1	4.22689710438941	0	1.32221633252209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99488820-2	6.18922924080831	1.95245445963568	1.26751109160144	1.54038451621661	0.123466653392281	0.723786842430432	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr13-75845383-2	3.78685446239091	1.29464072238544	1.35590529167839	0.954816483371698	0.339670510177524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr19-12000871-1	2.89284931300083	0	1.35880528170494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20784943-3	12.5843816490333	-0.0162447009498897	0.338052045600103	-0.0480538460314665	0.961673329211571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90681176903263	4.97154654357944
Merged-chr16-27296714-3	4.7301189422087	0	1.31339737129881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-88472159-3	6.8046106014736	0	1.30261389547463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99804413-3	4.18682621868509	0	1.31846169809073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51328659-3	4.21907952509442	0	1.32595037928162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34262980-3	9.04514839875916	-0.00995859792864114	0.486109650482855	-0.0204863201517378	0.983655424725189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23624693805165	3.23762319141631
Merged-chr5-64385117-3	4.65793094445615	0	1.30838695940494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76745323-4	9.59518505917168	0	1.28951164108248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39228794-3	7.13824955625515	0	1.31425088008653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171759476-1	3.10193167902613	-0.953146283256255	1.15349164489569	-0.826313989766652	0.408625999615135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05939665348454	1.04181016172925
Merged-chr5-107921585-3	4.30359355926549	0	1.31943106691399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99386753-3	3.27861304771633	0	1.31833471674074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102094323-4	5.78989922044454	0	1.29824821143021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99965272-3	5.96566364312303	3.55272614318562	1.08575845203482	3.2721146554535	0.00106746277004256	0.0199754931761744	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.62559269623071
Merged-chr10-21945005-3	5.04176357918525	0	1.30188598801312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24178907-4	4.84730617807783	0	1.32043867122561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63612336-7	14.2398962118297	1.15695372973845	0.500109415157714	2.31340121715883	0.0207005902358274	0.192445692068627	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01685064784956	4.46797480972182
Merged-chr5-99582238-8	17.8783284183109	-0.705504600430108	0.440626039279097	-1.60114141593714	0.10934560091405	0.663691030775547	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64776124877695	3.55788994719315
Merged-chr10-78457140-2	3.45142415125773	0	1.35827651547701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88034569-1	2.30238060282391	0	1.36115385180736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16999852-2	3.14635533118805	0	1.32884764993354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31942715-2	5.08356150245891	0.921820719231163	0.869581072727187	1.06007449810303	0.289110708553783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6788015016988	1.80505237968249
Merged-chr13-115210799-2	3.3596297078385	0	1.33021244483556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71093286-2	4.14759045475658	0	1.33279324436907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100853592-4	6.4048585863571	0	1.29255279831838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58068731-1	1.638854068272	0	1.62081913379223	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134997084-2	3.37644523885204	0	1.35342846574191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92219977-2	2.54812122875481	0	1.43559229764771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39686002-2	3.095918771954	0	1.32892574287311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88771277-1	3.70012867800089	0	1.39965894454377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35829904-4	6.33245279740031	2.82306828852397	1.13019231939028	2.4978653987376	0.012494362485114	0.131178761399784	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.07938469868934
Merged-chr11-71863343-1	2.82483867780538	0	1.36373260268732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41288970-3	4.87947956640574	0	1.3102352443226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19697193-2	3.95022482842777	0	1.31201947931959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172305828-3	10.3009438217808	-0.57049642714027	0.562191452179843	-1.01477250308276	0.310214283908635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79800859751123	2.12007346682594
Merged-chr3-60438886-4	7.34853126584235	0	1.30346647007829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78682421-4	15.1323278814489	0.478422669430752	0.445911655602774	1.07290909178866	0.28331190638765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41818691195533	4.83922554053008
Merged-chr12-35833115-3	16.9076685664834	-1.41337870927783	0.399367330637745	-3.5390443855806	0.000401578325059425	0.00931211399195642	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89280810082123	3.56641439136057
Merged-chr7-118797001-6	14.3518082963572	2.42489148109744	0.581168657079615	4.17244022291665	3.01354676201319e-05	0.00121783071558759	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63453673156615	4.17227079725666
Merged-chr7-102241874-4	6.62716237705511	1.75940785244209	0.945606083119276	1.86061393200678	0.0627987159577208	0.438704820715547	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	1.74374772464511
Merged-chr10-39321761-4	9.49747726217708	0	1.34075689930701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123895354-3	11.1649418691163	0.585483470582719	0.553555024412484	1.05767890229905	0.29020185694667	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81548175446684	3.37807365746458
Merged-chr18-39145382-4	11.4764115160999	0.24343931495879	0.67089677037175	0.362856590923665	0.716712015222331	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00974183768938	2.74093985836368
Merged-chr2-12085688-4	5.22273855129278	0	1.32343865851876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134073423-2	7.95961512495452	0	1.338136204254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86187992-3	4.82849285788762	0	1.33998692946267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89084832-6	18.5600034934043	-0.321952208768896	0.373141388198645	-0.862815594708305	0.388238863564591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91813841158492	4.61852950606425
Merged-chr12-103339801-2	4.80230575461355	0	1.35011396227955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164066890-2	3.96302224925539	0	1.30955950954631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152556641-1	3.28089240113828	0	1.35672919413158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62165257-3	6.80529155034155	0	1.32880216375033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23629924-1	6.07411128621042	-1.52337766061296	0.867236992949904	-1.75658749914622	0.0789881452740388	0.520640649779201	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23018031407443	2.17890037399384
Merged-chr9-48548449-3	7.06852079658621	1.27034035201275	0.820046658999696	1.54910740513512	0.121355903081609	0.715765079211712	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3779119867987	1.95880986522228
Merged-chr10-75151492-3	6.04330413000511	0	1.30220309516254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58588173-1	3.81834140672643	0.647339459215352	0.934708702305945	0.692557432725675	0.48858733165036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80639703153095	2.21043983090998
Merged-chr9-83564398-6	16.0841665021748	-0.0503240490123817	0.36820402413148	-0.1366743590896	0.891288197791933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44946282347167	4.4519244140027
Merged-chr10-61122528-3	6.89652528677083	0	1.3121123116723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87597638-1	2.26810942825076	0	1.35623899006855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119876835-3	4.6356370711149	0	1.3132046834627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109985630-3	4.89041279976468	0	1.33849614832253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118498512-4	5.27822578004338	0	1.30716048858834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8589864-2	3.96985104046665	0	1.31682918918413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64223301-2	4.56764147058602	0	1.30925185915843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103807533-1	3.49115099460966	0	1.33113904871253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44780971-2	5.87758856980964	4.21899624545747	1.11227913665358	3.79310921730567	0.000148772681270719	0.00433835947892905	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.11086637835816
Merged-chr19-61021737-3	4.70436467042399	-1.30606281818354	0.884526326121469	-1.47656749111182	0.139791611322314	0.788436270798201	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38007506983475	2.32267539517565
Merged-chr9-105034624-4	10.3242666918321	0.876286751004446	0.501167200650152	1.74849182042971	0.0803789007424177	0.526718777368033	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84523420651508	4.81359762389901
Merged-chr5-105515482-5	13.0277122197807	2.21359042310472	0.558164827899279	3.96583645629524	7.31390006243416e-05	0.00247891137697003	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95606139077953	4.17960475687035
Merged-chr3-153293060-1	2.88115524373141	0	1.32936312641057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97761339-3	4.99200715125932	0	1.31757241158516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38433708-3	6.48951144228805	0	1.32098799241042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126181319-2	4.68871471878476	-1.32043477591327	1.14008562556403	-1.15818912747015	0.246786864284948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.978861522855236	0.306240821987646
Merged-chr3-126744895-2	6.24700554661288	-1.84643410321137	0.756015364248702	-2.44232351685905	0.014593062718899	0.146662300281325	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6107099360823	1.26514550294121
Merged-chr18-35058511-2	8.14448576056728	0.380668103159188	0.752456788861289	0.505900283968814	0.61292665296225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3774206629483	2.55251396238028
Merged-chr2-174069818-4	8.32675569916893	-1.62372565384288	0.914327206500313	-1.77586934119337	0.0757544553020026	0.504767068029434	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39099629677656	0.733321818366247
Merged-chr15-80458228-4	5.68458586803781	0	1.30051547224003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122740948-9	24.5052618064607	-0.562885761448691	0.329787145806102	-1.70681534622225	0.0878563791254218	0.561928313189472	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91077866090916	4.29844691818226
Merged-chr4-119883063-4	5.17738769969466	0	1.31317490490941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60956398-2	6.7573090843579	-2.0526622338183	0.68902826241989	-2.97906827015961	0.00289126351505382	0.043214205319009	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0625832370615	2.00098049458557
Merged-chr2-93162152-3	4.84316395081955	0	1.32911491062801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43180616-4	10.9827145489958	-0.765753325737557	0.605348515832523	-1.26497927344289	0.20587875786347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94226796572785	1.52944205045577
Merged-chr11-86956570-4	5.14577536043301	0	1.30749775043081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102582312-1	2.00557529891729	0	1.60236845533219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3460954-1	4.24876470036138	0	1.39576203051188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108344201-1	3.49670314335188	0	1.38565941727275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-14484754-2	3.90509660061822	0	1.41568613322787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105687340-1	5.01402043757933	2.80869552474752	0.971635194967603	2.89068936499482	0.00384397867649896	0.0534557630547991	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.997694332404979	3.87382227705425
Merged-chrX-71285738-4	14.8574797599798	0	1.28099061353223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-46141173-1	2.08256723954874	0	1.36967013216877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36497941-2	2.29188320326561	0.744212564524202	1.45789056746706	0.510472172007532	0.60972070559418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.420961122473315
Merged-chr15-38404113-1	2.82822825204197	0	1.32558447606176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4910048-1	1.89351844965875	3.12162530739734	1.28202821782353	2.43491154406637	0.014895430519055	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr5-95914850-3	4.77096630566229	0	1.33079127624174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48356021-2	2.23548750085565	0	1.53740844531433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10733316-1	3.34167868413786	0	1.3195555480595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120433952-1	1.88208887160532	0	1.51490013831926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80646827-2	4.11101495272312	0	1.33993686399248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35325474-1	5.46927218825767	0.0245252446910111	0.692089134787918	0.0354365405527231	0.971731647851527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96213788472212	2.48211543439749
Merged-chr7-47034092-1	2.20890473849304	0	1.37844538549812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12144834-2	4.56174552869562	0.959632633567537	1.0083202361852	0.951714147083008	0.341241972653763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.970500726884725	1.20275690226768
Merged-chr2-23027508-1	1.54099459227995	0	1.75419280343465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127650251-4	12.2529500664361	0.74352719200092	0.59779842560919	1.24377576144203	0.21358210355383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18628178895783	2.77956094982157
Merged-chr9-31353977-1	1.27432801903545	0	1.71873379905278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125275420-1	2.0935938356349	0	1.36765878909987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41772716-1	5.95576931693701	4.08017885865966	0.931704073672698	4.37926480516066	1.19080362474528e-05	0.000582006384911032	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	3.58417074372833
Merged-chr7-30273446-2	4.37432851143992	1.08731484106716	0.952246927975531	1.1418412694476	0.253520004547485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28224523329293	3.40617353414439
Merged-chr10-80666228-1	2.93654956347103	0	1.45290245009274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25607871-1	2.47322058041685	0	1.37934231084226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131095044-2	3.02634139356884	0	1.35159321432281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54857222-2	3.83605450612923	0.400755356521114	1.1795131285086	0.339763370864585	0.734034734421001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4220576953947	2.6322505509536
Merged-chr4-148921107-2	3.66632404479932	-0.598928213427669	0.882809854481208	-0.678433991631907	0.497496562931127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64618802014554	2.13691092425662
Merged-chr3-52512958-1	3.960759644785	0	1.35720890862942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141474381-2	7.52854442010438	-2.19287825598521	0.874038678614569	-2.5089029920977	0.0121106738140346	0.128304813724369	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35473751179528	1.19380919831911
Merged-chr19-53428056-1	1.44537304176903	0	1.49363932860912	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94812467-2	3.13233520089277	0	1.40937505517659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115696068-4	12.7033247020495	-0.223995302905046	0.53374185403952	-0.419669735865346	0.674726736747015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1640956573404	3.71983267057957
Merged-chr17-3273924-4	10.7484284253501	-1.33467038701713	0.599125690266198	-2.22769680669864	0.0259007401127397	0.228541889250337	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81323570272771	2.66722862650681
Merged-chr10-68301163-4	7.62452997989506	0	1.32735836521071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74308799-4	7.6370071401507	0	1.30479530490304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122789153-4	11.1612530089688	-0.894494429859426	0.462299164757136	-1.93488221059049	0.0530047516673137	0.386611061776123	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14783030495898	3.27028269168757
Merged-chr15-87074425-8	18.7793479184536	0.719045108613766	0.386029805131729	1.86266733566958	0.0625090842407616	0.436961769233719	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60600446994432	4.33737881679496
Merged-chr2-73554605-4	5.78221864216194	0	1.31080156360376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137404452-2	4.37701963301386	0	1.34687592125326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36079847-2	3.83926971436794	0	1.34424662749459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128450464-2	9.59733604005303	-0.712850269176683	0.482506793875277	-1.47738908182285	0.139571371158677	0.787669990477148	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93205585500569	3.29398433573242
Merged-chr12-98280710-4	5.1012107749108	0	1.3029866324879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28756581-4	5.75340771522887	0	1.30760698502361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72236495-3	5.20462821669336	0	1.31176120636429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135510444-3	4.32800215668409	0	1.32830354206061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118700225-2	8.85736422219712	-1.61005767461098	0.624074937764743	-2.57991080426615	0.00988258371857863	0.109958677962581	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81890983774134	3.02889460529794
Merged-chr1-14577130-4	7.02116866076573	0	1.29292881702493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38180177-3	5.86817293527137	0	1.31685311837618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152697627-3	4.56893393843058	0	1.32718428920755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127560717-3	6.31798141826687	1.15865830099121	0.977917889347259	1.18482166408122	0.236087965102687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	1.14490468848716
Merged-chr6-43640775-4	6.90847218928392	0	1.29313822874807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7833619-2	3.37849263402704	0	1.34813173063062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64901250-3	7.52074827073392	-0.832885245937766	0.7270420728563	-1.14558053382749	0.251968755543002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04521540780956	1.53823966306787
Merged-chr9-124080694-3	5.18982529934295	0	1.3427780030994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90900395-6	14.5337193683035	0.564869143445656	0.463542049371095	1.2185931011265	0.222998668806168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27147241463792	3.38751761867622
Merged-chr10-13103998-3	6.57923958091981	0	1.33030597207464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34172960-5	10.2375388714128	0	1.29756436409205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86296294-4	14.1632831838932	0.0934778696214957	0.543377060777218	0.172031313739652	0.863412911169704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71748561954939	2.73690813973276
Merged-chr10-8505031-4	5.29664832582274	0	1.30618232612189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85285375-1	4.28614980603682	0.504439115523502	0.858760340389575	0.587403832942104	0.556932520187393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64092928124254	1.56343534314907
Merged-chr1-46970627-1	4.70754758756306	-0.146367852267592	0.883180004303784	-0.165728222507681	0.868370834828694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35228488865991	1.15307255889252
Merged-chr3-14871601-1	4.37332086984587	1.42369899361766	0.929107690783183	1.5323293604615	0.125441179367793	0.732470673484748	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11083935386948	1.31996877971892
Merged-chr2-128468971-1	2.7373485515391	0	1.40463478720497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30591576-3	5.82160375332011	0	1.30249003193571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58556854-3	9.52801365603183	0.957339319108594	0.947030102646485	1.01088583819384	0.312071072875635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06666019759893	1.29358708977899
Merged-chr4-129767708-2	6.2843367078691	1.41767393898937	1.3260262170654	1.06911456255126	0.28501805050738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.61242769162773
Merged-chr4-109420961-3	5.12127251352139	0	1.30552182399149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65371115-3	4.3822761016259	0	1.31000725183941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102140769-2	4.03024948175004	0	1.31266267178607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91505639-1	4.01678910887301	-2.66076673957464	1.13047070090052	-2.35368040715705	0.0185885852809878	0.177197621264978	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64752561212589	0
Merged-chr4-154940736-3	7.93148601338068	-1.48461565396922	0.588746723491232	-2.52165421009146	0.0116804465510573	0.12477566812448	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57698864659882	1.84022605426951
Merged-chr8-40311360-4	18.0772165471378	0.388370096313382	0.43099272220355	0.901105926633169	0.367532002084824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6085594449488	3.89401946897091
Merged-chr16-57571319-2	7.49741798879858	-0.711731469631932	0.743676503224823	-0.957044449496028	0.33854482013514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84635294695678	1.43116362910629
Merged-chr11-32342947-3	5.22151598510345	0	1.31270516004125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127148065-3	6.39736310630914	0.415118353285139	0.993614430456481	0.41778615583756	0.676103473758933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.781596303653021	1.08186277552917
Merged-chr14-63102256-3	3.93339232366079	0	1.35462909207413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33884349-4	6.21450614505711	0	1.30946695289902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31228085-1	1.76200697760214	0	1.57716198666261	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162587752-3	8.68704805177249	0.242497998955095	0.604920331327678	0.400875927616552	0.688511473898131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07718081506062	3.32847794617102
Merged-chr12-81927967-2	5.01386043197584	0	1.32051880210784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95637357-3	4.96559562205697	0	1.3157406763034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170932346-1	2.49957901250175	0	1.41473676913121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25694865-2	5.89003142485471	0	1.3251424816327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171665783-1	6.79416818139547	-3.95633162990754	1.03457696849743	-3.8241056493395	0.000131247630842187	0.00393417783716219	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39925205810429	0.306240821987646
Merged-chr6-127338590-2	3.44856328731798	0	1.36231727814341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112956021-4	5.36450647071341	0	1.3044402223033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110062921-2	4.45152506412566	3.53506003005477	1.02605588780808	3.44528994186328	0.000570447146718581	0.0121778631981288	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.83995505205827
Merged-chr1-151339010-2	2.87162676894156	0	1.37953615854468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38086080-2	8.79674922783752	1.2589029515466	0.674587832280099	1.86618093494442	0.0620160555008274	0.434258590093985	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80602454687674	3.11974716943976
Merged-chr6-73241014-2	6.10377192165481	-3.58126373709064	1.09100983418722	-3.28252195797907	0.00102882972614148	0.0194369431870252	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77708230207754	0.423054662900563
Merged-chr4-3646143-4	7.21485427468462	0	1.3086763663163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40756568-6	15.5202499943484	-0.119209977771267	0.463865416199401	-0.256992596576812	0.797184488262475	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05281334205662	3.89080895314823
Merged-chr11-79210118-3	5.19992963691545	0	1.31202040017789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82612206-4	6.173419666918	0	1.29577978245467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-130954345-2	4.52979472939271	3.8943792496212	0.983813343900714	3.95845337305592	7.54366635387805e-05	0.00253704797509272	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	3.17198420640041
Merged-chr2-104685633-8	13.1570012139356	0.377089484522737	0.416825240586636	0.904670465713699	0.36563999208211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74642843300948	3.89309051625739
Merged-chr19-33120195-4	9.62608868900744	0	1.32018852714721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70738417-6	19.4722617744463	-0.0327391084005603	0.387232170132526	-0.0845464579798618	0.932621966912136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12266288584753	4.04093574419459
Merged-chr2-34784274-2	6.72619910828274	0	1.37219095194246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12233029-5	14.9853580718896	-0.663376983709617	0.511574931587559	-1.29673473571306	0.194722473288237	0.998991599280634	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0507730082004	3.95457920084811
Merged-chr11-82088190-3	6.89821697876864	0	1.30365248864166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122940515-4	6.77078019945221	0	1.29835784755522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-163383793-2	3.43460834611119	0	1.37451151895882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119342071-2	3.93367052554765	0	1.33810912822479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139147822-1	4.37684745154315	1.63005712747357	1.08990503756631	1.49559555308909	0.13475908268977	0.768579009703639	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	1.20275690226768
Merged-chr10-68673683-3	4.44504509595656	0	1.30021657366923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186508575-1	3.74481118384511	0	1.34600111902113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136321552-3	6.30738144806561	0	1.3528859131141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165456646-1	4.8023815198096	1.47956891566921	1.13687739462507	1.30143225880321	0.19311053770766	0.992996631810258	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.15307255889252
Merged-chr6-37430658-3	3.69157146167818	0	1.33722109489659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58611942-3	6.30782890160506	0	1.30993959366469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90134071-3	10.5671982110771	1.93091512149524	0.594168990204721	3.24977431223724	0.00115496628337491	0.0212299372020864	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42904285574129	3.62814759721134
Merged-chr4-3812664-6	18.6771661654019	1.59839281130022	0.434816479232731	3.67601709604179	0.000236903653789917	0.00622134172643957	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46348109496274	5.04258687812239
Merged-chr3-13583874-2	3.58255126177371	0	1.33024769641943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101160226-3	11.2967524326207	1.72546992126976	0.567889238820284	3.03839164984743	0.00237844617975966	0.0370670031153291	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64755237396011	3.54318759211267
Merged-chr7-28807048-3	4.65184984550913	0	1.30976298214484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43218166-3	5.88977276733603	0	1.3050052453511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62441462-2	3.96888076380403	0	1.35878550606943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34963626-4	13.347105572353	2.20059598346603	0.854150894836731	2.57635506415605	0.00998480556515692	0.110794210300687	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	1.47126464988938
Merged-chr10-93948710-2	11.3812698600098	-2.45063043000643	0.979443581975645	-2.50206390148909	0.012347163673898	0.130219134511707	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67485086341081	0.992113827166316
Merged-chr10-99169102-3	8.67115258054461	0	1.2926908812104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78679651-3	9.52785234321557	0.188656023344757	0.521156180977979	0.361995175785374	0.71735563549054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81599442637571	4.1289509627862
Merged-chr8-104344180-5	11.286961674795	0	1.2818758982019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157076396-5	16.3622174040638	1.77659612959038	0.451423186245401	3.93554470333429	8.30082106238336e-05	0.00273537797853002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21590491275154	4.16336594883537
Merged-chr3-126822470-1	6.4159322816437	-2.13894881159785	0.734009807832018	-2.91406026019663	0.00356761033539609	0.0503953880191943	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04172549386761	1.93871841517079
Merged-chr13-52275904-4	5.94840008534019	0	1.29369969140473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116079359-4	5.58875288055803	0	1.3037951621866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100994754-2	6.19821853510503	0	1.32785130723234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31033238-2	5.84483377220106	0	1.31155910737917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119277111-3	7.64561325216299	-0.386513331273294	0.470955770625224	-0.820699852048045	0.411817255102974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03257220294922	3.72381754707983
Merged-chr7-128391449-5	8.61397866709822	0	1.30456430023568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92565028-3	4.77318290727411	0	1.38381865347641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105268510-4	6.06511233529223	0	1.30174301339524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4647466-4	4.70427703819198	0	1.30594155899366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85483305-3	5.05287927001423	0	1.31200813185741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43554713-1	1.90916960946173	0	1.49350068201497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62252303-2	4.85895620105237	-1.19094141649311	1.03419188103311	-1.15156716885402	0.249498979027102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74568512667312	0.581381506691384
Merged-chr11-120917114-1	2.29354032922335	0	1.38111545773786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145610457-2	2.29922711317385	0	1.66343692864814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76117298-1	1.856064738526	0	1.75190429613837	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116114087-1	3.23335607668074	-3.20336653795533	1.34377723120569	-2.38385237044173	0.017132473735533	0.166029753629266	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72577171449416	0
Merged-chr18-56727444-1	1.62145683251222	0	1.38584885447008	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96343428-2	3.09473896180231	0	1.46351015605663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64196180-1	6.25578466030478	0.89476673954543	0.804783560236953	1.11181040935029	0.266219675306668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13149353545977	3.10413537157041
Merged-chr17-35220784-3	5.10883625301256	1.94633552215437	1.28317211533382	1.51681563127486	0.129313239370563	0.747391241325665	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr10-78312088-1	2.52036046098019	0	1.41256562492492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46352292-1	1.63304972499886	0	1.89643399562522	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105218786-1	1.88902241016747	0	1.4127546418199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100807806-2	2.09282405234061	0	1.55867495085965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27599152-1	1.68411341892898	0	1.45229496457786	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80257197-1	1.75340994829835	0	1.43262183730784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184771780-1	3.92437840104749	0	1.33794371362651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35018647-1	2.4265597627678	0	1.44101260532846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-99211102-4	7.58861868307118	0	1.29225288140323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128455483-5	11.3649488819109	-0.206661754144972	1.21920643586341	-0.169505137166225	0.865399331956412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.423054662900563
Merged-chr13-44498620-3	11.9415447433804	-3.63299014854054	1.01458478728532	-3.58076544618926	0.000342589096845121	0.00827303293512242	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56443172256925	0.727201944460961
Merged-chr3-41409026-1	3.27668948612463	0	1.33736302754775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120495002-1	1.82046614558933	0	1.48951303593687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147449204-2	2.11611796681561	0	1.38862518092058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-10220670-2	2.96231494902237	0	1.38022857752526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45498334-1	2.63836660580888	0	1.37728195538731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54705776-1	2.78579472615513	-1.03151463132536	1.11002640448189	-0.929270355336114	0.352748994280537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64699650102933	0.733321818366247
Merged-chr5-34238687-1	2.00300882553992	0	1.42077212169335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7847607-5	14.9964188293815	0.262950435083937	0.435289633178676	0.604081547184475	0.545789427160745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61069844297752	3.86630796491275
Merged-chr16-92573487-10	22.8614908131107	-2.52102013760064	0.609562252533756	-4.1357878167842	3.53738937516744e-05	0.00138644753131139	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48249224443583	2.01259914296816
Merged-chr2-101782354-5	24.2410341337349	-1.12162760328227	0.389291231102687	-2.88120438804953	0.00396158653809864	0.0546839530880004	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.71314855685803	4.61942193768911
Merged-chr3-136742902-4	6.59298134273459	0	1.29656503961204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47553868-4	6.20990755394238	0	1.31792093273256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93579056-4	5.82758198788448	0	1.30959306196974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59225596-3	4.11430253370211	1.29895365019951	1.31533444014609	0.987546292831231	0.323374900390097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-191633530-2	7.89967850311713	-1.81552028806842	0.604357705180939	-3.0040492120885	0.00266412228742202	0.0405709007210159	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3434710752189	2.18069501644732
Merged-chr1-156454558-4	10.907721290583	-2.5525756899572	0.596292006055527	-4.28074779476332	1.86266356608171e-05	0.000829704249414967	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47880097343743	1.9272926343824
Merged-chr4-102593809-3	6.05536203602444	-3.35249219891581	1.00092857694766	-3.34938203996458	0.00080992034570599	0.0161448708106446	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42340876798498	0.61242769162773
Merged-chr10-120151802-3	5.70008724210768	0	1.34319076221739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160618770-3	6.94869191856641	0	1.30894542593197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75722218-2	3.60662355763803	0	1.31614110682127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25859658-3	5.21567938844388	0	1.315473102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32552822-3	11.943264780873	-0.208019494464694	0.48152294346681	-0.43200328725153	0.665739023992669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11744541318204	3.83359629374889
Merged-chr4-63283530-5	13.1724483919515	-0.601268669220784	0.609765691681647	-0.98606510242085	0.324101167071637	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50070143862913	2.0007239609608
Merged-chr8-126757128-1	2.91390239752081	0	1.33381310201291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74687430-4	6.51174933464234	0	1.32268116677903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-42961796-8	22.1426802274402	-0.878785522193056	0.329208547936786	-2.66938853107119	0.00759894915070572	0.0893095200003626	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37269099381784	4.56605541163222
Merged-chr1-195232775-3	4.13181194487519	0	1.33907248360292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65794991-3	5.19618473296195	0	1.34585629583734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74398243-3	8.31072890131062	0	1.29050930448452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53460133-3	5.28503968085333	0	1.32900072857321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144214696-4	7.09572345508541	0	1.2961154379096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87751550-10	36.5624001993191	0.00310505009829781	0.259030629730029	0.0119871927946668	0.990435832992625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29066989156712	5.30173154128458
Merged-chr3-139021936-2	6.2952289518453	0	1.31266897205155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112995748-2	5.66724298304434	1.90688927426767	1.28541124420033	1.48348575825161	0.137945397533056	0.781463367767235	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr11-3136136-2	3.08181592524432	0	1.37149546540972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124497020-3	5.51865621421843	0	1.33907443202265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115503196-3	10.3078062152331	-0.862843783316318	0.518847205292815	-1.66300169783003	0.0963120956352669	0.60248996758397	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83144777526094	3.83164368177077
Merged-chr7-101326842-2	7.82664291320826	-1.42520346516298	0.510949682247635	-2.78932253934204	0.0052818433854445	0.0679959294454799	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25041076663105	2.35157965090746
Merged-chr18-32173208-3	8.09464555559824	0	1.30041881351194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144258071-1	2.77385395479357	0	1.35955023936174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53288982-3	4.3077887438838	0	1.35121545442717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96296139-1	2.24395677709164	0	1.50996433645103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21683029-3	3.41226858147744	0	1.33463774221866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4458478-3	5.24624421233383	0	1.32379718524853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43424715-2	4.53034701962941	0	1.34909381886809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113783878-2	4.90474817840134	3.42846516240509	1.0882907468452	3.15032097106745	0.0016309117799646	0.0276670719557546	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41959898789419
Merged-chr13-104152634-4	14.5546737815176	-0.320731240111521	0.382052288132555	-0.839495666101707	0.401191220188541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84543572463638	4.57203730509561
Merged-chr6-86660728-6	13.8397454223236	-0.105593465635862	0.554957063790049	-0.190273216660614	0.849095040251849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28519615843941	2.99535888864231
Merged-chr4-15289088-2	3.93178552850808	0	1.34076181149146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91769620-2	4.50814480333118	0	1.3235268721089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126721825-4	7.12125522899107	0	1.29224296368947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32824104-1	5.31148831566737	-1.08537078114305	0.630366487044585	-1.72180914349002	0.0851040977122323	0.548822475326266	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14398312884686	2.55196762079915
Merged-chr12-12176443-3	5.14432960174477	0	1.31119825872207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109022019-3	5.24371058303076	0	1.31314113251468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81412575-3	7.60350749869988	-2.4893830212511	1.0925245335271	-2.27856029302554	0.0226932165703925	0.206879315012398	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97265169430215	0.306240821987646
Merged-chr4-139259076-1	3.93224397510371	1.15906802585907	1.05030088652257	1.10355807629242	0.269784885654529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.744412847832832	1.62745902464378
Merged-chr7-84615191-2	2.46824454462723	0	1.4619109923128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71866439-2	10.8620461507413	-2.14761361086089	0.608151976609904	-3.53137652011361	0.00041340282802503	0.00953218814400974	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51276989250271	2.66287514638307
Merged-chr6-114834667-2	2.76527001835252	0	1.37272168809508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25710999-4	6.95239217517597	0	1.31604833173132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150548265-1	4.08878287222887	1.22293463945616	0.953426650839304	1.28267301777186	0.19960665681592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61898312957918	2.72780099208748
Merged-chr4-63278399-2	6.9149459543194	-2.08139151025289	0.718828517995276	-2.89553274271537	0.00378515539628428	0.0528063118116125	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58312560017666	2.27643187026249
Merged-chr3-15346830-1	2.95763485371035	-5.3148312787471	1.10310565610137	-4.81806185051298	1.44959439176568e-06	0.000109017250736445	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99893159927914	0
Merged-chr15-84944300-1	3.39909441468734	0	1.35947076378007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38939369-2	5.85175028903153	-4.5279512808177	1.11581287680314	-4.0579844299615	4.94980670462668e-05	0.00180396022822384	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20544099757907	0
Merged-chr5-150900895-1	5.13914209855959	0	1.3179319549703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105198202-2	8.83046566845908	1.02975509744823	0.745250697259801	1.38175663737655	0.167046437517768	0.894299238574151	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15130939151543	2.92370951213634
Merged-chr5-121917780-5	20.4685485034344	0.214289053148943	0.403829817068731	0.530641978604744	0.595666900015074	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01166463766346	5.24260707710573
Merged-chr14-63411117-4	9.2593934096805	0	1.30865952271319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63908704-7	21.7876159280243	0.379688051532066	0.396689244830486	0.957142288277351	0.338495441599704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10257588627746	4.5989627229889
Merged-chr10-30723186-3	4.74035719879658	0	1.31255769062622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152575109-4	5.79264169232761	0	1.33555497342158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122465150-3	10.5085104029972	1.4313175259208	0.698161987442741	2.05012239518152	0.0403524884937844	0.318270816308369	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53801272452425	2.47032133658633
Merged-chr10-39774666-3	5.45719968574683	0	1.31658621050853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74790470-1	1.91320933285979	0	1.40836104532576	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123207647-3	4.38004330705711	0	1.33166312513762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34140069-3	5.68386596250134	0	1.31066032971316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89876826-2	3.65935457765965	0	1.38500860844882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143119418-2	6.74735926827914	0	1.30510308936071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31073530-7	16.3485630202749	0.165612259090085	0.412250112211558	0.401727626468411	0.687884490496278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08932710219088	4.15447865899264
Merged-chr15-25282119-3	5.67102461119779	0	1.31078749567456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140663152-2	4.64149981611131	0	1.36177817953938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20040887-2	3.49980268508429	0	1.3420086507032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34196759-2	5.38022971355191	0	1.34109652050979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7397428-1	6.55186509942968	0	1.29582835787372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91891175-3	8.37163445943957	-0.822355907682527	0.92927324868866	-0.884945207282132	0.376186184137632	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28740944814658	0.73596151290311
Merged-chr14-104460428-1	2.25937423622584	0	1.41593812962988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35063233-4	10.1981226822444	-0.750007822626153	0.497468120215086	-1.5076500224816	0.131644122905801	0.757121708801485	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10062806020122	3.34391709441359
Merged-chr17-56023190-3	4.37003242717212	0	1.31722945831732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111095909-3	4.57344589425263	0	1.30453900940667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4775110-1	4.22818315227635	-2.74426985310076	0.941350504746503	-2.91524765670548	0.00355406389758513	0.0502474814910424	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96674877717523	1.20539659680455
Merged-chr9-121265529-3	5.25143079431599	0	1.33835685665783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104165568-1	2.07401254805096	0	1.43034905363352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95883821-3	5.32228073164936	0	1.30611075522412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20171240-1	4.70062590748911	0.572945222058641	0.637690388568521	0.898469276516431	0.368935417635498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49173682741532	2.96945729934465
Merged-chr10-88621505-2	2.92567413843452	2.51335946570961	1.35588597364106	1.8536658056579	0.0637869866491517	0.443900365237004	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-168625241-1	3.27140673812105	3.34552750336999	1.21234019517047	2.75956164507074	0.00578789661957902	0.0727478154458571	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr11-72779551-4	6.68571777836863	0	1.33034854698496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51358240-2	5.45338986770942	0	1.3093984415777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60350488-4	9.45822304106639	0	1.29201369118764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104370817-5	13.4965418861649	-0.462706599632276	0.477125287396393	-0.969780080526023	0.332156123847652	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89947694359282	3.39726049287154
Merged-chr10-93166112-8	26.0735176306898	-0.746182749098779	0.327558952277699	-2.27801055019305	0.0227259490243193	0.207062167448853	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.36392211580722	4.48582858674874
Merged-chr15-91254339-4	6.07182960072611	0	1.30574267814366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169919450-2	5.87659712559886	-1.656065792087	0.950847364886905	-1.74167364105171	0.0815655673701153	0.532785242439779	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09483350294077	0.733321818366247
Merged-chr8-71752445-6	19.6822634506385	0.5175260971472	0.470301257494123	1.10041401952591	0.271151772858338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.66757809875508	5.17389378498527
Merged-chr18-76151203-5	14.1109664391574	0.172779293174598	0.586416904589258	0.294635594271651	0.768272268246217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81602261263239	2.47843137798393
Merged-chr7-90055006-4	6.2783587729667	0	1.31355777422308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49267119-2	4.01316140708779	0	1.34801863151673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132011911-4	4.25275930817237	0	1.32300080905552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-4821967-4	6.12910489436463	0	1.29681686953398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34510584-4	5.63611879376143	0	1.30154302701861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40294586-2	5.3712958397157	0	1.30426412405692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30026904-7	15.2489185947462	-0.837812096018453	0.500755114410988	-1.67309743207301	0.0943081169968809	0.593419182790388	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10880127386108	3.14065647517635
Merged-chr11-49236053-3	4.81650133479171	0	1.32092931536382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72788205-3	7.47574406602735	-0.365033670496029	0.734746694376738	-0.49681566897783	0.619319044654441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09631624765552	1.43116362910629
Merged-chr18-76161423-2	11.0417725138271	0.155302971733607	0.549004559775982	0.282881023423516	0.77726804181125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13344287060958	2.89017604405251
Merged-chr3-121500413-3	4.08053154737583	0	1.33591898068235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89871580-4	14.8502513974222	0	1.29508842985947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9032583-1	4.68082178027839	3.44078754603768	1.24699538912988	2.75926244477822	0.00579319893967619	0.0727864598946511	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.8134253095212
Merged-chr13-102860903-1	2.1612940832096	0	1.37084836362273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165626574-1	1.45689454826882	0	1.56206977991177	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135475635-3	3.37972227901713	0	1.38816008058804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111139899-2	2.28463611271876	0	1.40189218291939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23045139-1	3.88308984386739	0	1.34405353947545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57529151-2	1.85735865929224	0	1.71566623268455	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17915285-1	1.68274349048023	0	1.4743892066749	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91869501-3	6.95483445979794	0	1.31534924096473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9991478-5	11.77785798215	1.06728602111437	0.567819588779524	1.87962170063278	0.0601596535952499	0.42444317899322	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68288358042804	3.67371794261566
Merged-chr4-105704383-2	4.00685149101633	0	1.34263282221759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54669233-1	2.2859892329824	4.05312586338854	1.48425237747641	2.7307524817847	0.00631899102041708	0.0780126180276166	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.69453213775868
Merged-chr7-15912320-4	5.71817130510678	0	1.30006692291793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64173121-1	5.83972783566308	1.23706948580264	0.809845936850836	1.52753681843871	0.12662757907574	0.737239789843717	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55837087952717	2.67259798499517
Merged-chr7-99833286-2	3.33656595332362	0	1.3509221912115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70104154-1	2.0279502522044	0	1.49661118664147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138495275-1	1.36603517433255	0	1.72176130906946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67899292-1	2.55841530023604	0	1.36325972835683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173976942-1	1.32621829167222	2.06398440152479	1.7088370075717	1.20782988218271	0.227112704764525	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr12-115617574-1	2.98897572963585	0	1.36118849956564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33160471-1	2.97453919741768	0	1.33856431457097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77742754-1	4.00274350400253	1.58766458452555	1.04324911014458	1.52184609513401	0.128047648519178	0.742185705174224	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648127181902715	1.15307255889252
Merged-chr6-115283992-1	1.54066739665649	0	1.48204302832217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-46948685-1	4.69253434399779	3.17407864859653	1.48833149625865	2.1326422618721	0.0329540836666862	0.275408306852958	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	3.97142967812831
Merged-chr5-121961359-1	2.3885365993776	4.70113490257284	1.8636462260165	2.52254684228423	0.0116508431897939	0.124564135975175	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.28262991457806
Merged-chr4-137865600-2	6.96870926445821	3.04571077527927	0.716437152740314	4.25119044096147	2.12637260573063e-05	0.000923869310465915	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93748188180367	4.40131443827087
Merged-chr11-99187812-1	3.09667589214045	2.50946924072918	1.45669387876833	1.72271558033249	0.084939971412958	0.548196283649497	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	1.09662457429765
Merged-chr3-149086715-6	12.2749369180255	-0.911650581781376	0.6065336614102	-1.5030502670895	0.132826082058664	0.761640326272854	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13569441484796	2.62741322732168
Merged-chr11-106131960-3	4.84864474459183	0	1.31531660850439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-98107272-1	3.42511945584221	0	1.41021501770867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66162942-1	2.53940066042558	1.87374474019648	1.32779655781264	1.41116854775042	0.158194921802896	0.861019936709316	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	1.59982791176663
Merged-chr6-50874087-2	3.21669828634204	0	1.34360497325373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43701144-1	2.18655409536716	0	1.41869165106747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38635258-2	2.85091615750187	0	1.40662382464942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102369651-3	9.78107156789528	0	1.30238085978464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142344914-5	12.0791817414523	-1.12469926732024	0.69885618824354	-1.60934293240929	0.107541376304003	0.655602087504562	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03118748980128	0.926147595614233
Merged-chr17-29848977-3	4.91943574910168	0	1.30995442746234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7858734-5	11.2907525782459	-3.44012027653903	0.741878081737254	-4.63704261013253	3.53429573580591e-06	0.000221218476199208	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42689229284853	1.04220233489076
Merged-chr19-34043294-4	9.38650750953787	0	1.30690424650909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109434468-5	13.694394391296	-2.32307509006498	0.644822326256432	-3.60265920622163	0.000314978364858036	0.00776115242459019	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02303003756768	1.21444166002597
Merged-chr6-125527892-3	11.1177607949751	1.23267028199775	0.645842800481168	1.90862278108447	0.0563107709668156	0.404892575879807	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01377981571185	2.81973743637996
Merged-chr11-115428098-2	3.69395336458197	0	1.30624372833176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59265307-4	7.09994998728254	0	1.29956297299781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64809509-3	8.94198507402695	0	1.28465221729804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109343795-5	11.1990569587526	-1.2615335151873	0.82643792141266	-1.52647099376916	0.126892608899427	0.73788782674623	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93839201710362	1.04885222765555
Merged-chr9-59476806-3	4.87699802033975	0	1.34985201965339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68666589-4	6.28448506719976	0	1.33568790612122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64367177-2	4.3662612247012	0	1.33960959767776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55509975-2	4.01715585592301	0	1.40130749203478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38481934-3	4.8373066148559	0	1.3731682157328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62252162-2	3.58877448239416	0	1.31681542391436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34052342-3	5.69294610748276	0	1.3292242122115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44599731-5	12.1535792057157	0	1.29458209725617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132624350-8	31.2968202157315	-1.428627380185	0.382435254233113	-3.73560586889353	0.000187263773731057	0.00518954137329501	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.82373783276945	4.49694058918862
Merged-chr1-191421157-4	5.66074410409648	0	1.30431733652465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82715842-3	4.21563749057874	0	1.34151986994401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102795904-3	6.19990286067556	0	1.30011956997205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68031062-1	3.20218352056426	0	1.35271136881882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60652776-4	9.86157028557819	2.70668687949579	1.00447389487243	2.6946313819729	0.00704665398485617	0.0845210446575644	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.428339764855
Merged-chr9-70833821-1	2.75889057793975	0	1.35088294139656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47445092-2	3.70901094412324	0	1.33466818166637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58976636-4	6.88793412666601	0	1.28902946945221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4922816-4	6.20558356909753	0	1.30140541698678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3737200-2	3.51355412967146	0	1.35058238612477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50795652-5	10.5346268761127	-0.550463987962797	0.562326823784215	-0.978904019300401	0.327627406059161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53632581969152	2.4505050359387
Merged-chr19-34382856-2	3.26256985695812	0	1.45769216162174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88116374-4	9.19159526777115	0	1.29651950739447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4808291-4	9.23787395538696	-1.63949103674419	0.512559424652609	-3.19863601738542	0.00138079379771336	0.0243402620732067	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31824732595738	2.54825825776297
Merged-chr7-118478840-3	12.3329487718492	-1.7916600796994	0.536952934142246	-3.33671717906054	0.000847741662825082	0.0167239782971815	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10219613325725	1.64109723835872
Merged-chr2-91517536-1	5.07085677318019	-2.64671773485811	1.06469128971051	-2.48590155703984	0.0129223706491124	0.134441208794284	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22185746216727	0.306240821987646
Merged-chr2-121855596-1	7.60952261523453	-0.0690686467362374	0.571296044400123	-0.12089817077022	0.903771691057977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35184155759429	2.51997304872579
Merged-chr11-59519081-4	4.36526678716716	0	1.3219456948924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98601960-3	3.62161033847568	0	1.37113093617653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120450843-1	2.68972035064384	0	1.36285737180107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43501496-1	3.26988054956686	0	1.37115330406335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25452913-1	2.30543545830853	0	1.4866626398055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34511615-2	5.18732874970731	-2.32914010048209	1.11404362004708	-2.09070817207648	0.0365542319877065	0.295774250058032	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39400527630355	0
Merged-chr15-99449573-2	7.73854854630398	0.626303233988495	0.67403310493422	0.929187645834719	0.352791848746589	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81765232552147	2.89193467783825
Merged-chr3-109323941-2	6.66364263875387	0.877705999182885	0.89902353129583	0.976288126649791	0.328921702153438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05171748957277	0.793480537552656
Merged-chr18-14657649-4	12.6046264241577	-0.745980931533022	0.511545492157474	-1.45828854514347	0.144761026253986	0.807404747490011	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44839489577458	2.30406722002565
Merged-chr7-95791068-4	5.76312162957734	0	1.34318470443163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59127131-2	3.43155375851461	0	1.40401265156252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63665699-3	6.12885808641565	0	1.32021647640305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46204741-3	7.89157272419101	-0.0685052594979815	0.485341110737569	-0.1411486848783	0.887752483638787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29081421016574	4.10930129132978
Merged-chrX-96117556-3	4.5794762388334	0	1.32817822541035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119140313-3	6.89421213484752	-0.510090684818784	0.7268470698398	-0.701785431880753	0.482812985267708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74440558437506	1.04181016172925
Merged-chr8-34689946-6	22.3309807320855	1.17010974132094	0.473338407476372	2.47203633349646	0.01343458614467	0.138338554397984	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92186400653642	3.85016940509844
Merged-chr16-97526370-2	7.35455456608465	-2.47927313279554	0.908346437412544	-2.72943563235392	0.00634428331281958	0.0782509508039842	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29660522809912	1.47158896970822
Merged-chr9-109100839-2	4.44108349435455	0	1.31799629105883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60973648-4	4.48102501666897	0	1.32764152074423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59425877-2	4.48897015528864	0	1.32412098846706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83272745-2	4.03926393785296	0	1.31013745451866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137365513-2	6.09025868178274	1.30396450456128	1.30814904198657	0.996801176860604	0.318861026922038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr15-55356195-3	5.07921093671108	0	1.32574483807537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61211920-4	5.0936278050414	0	1.3035546528485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8746291-3	7.60130780566673	-3.49707825112893	0.930303922415252	-3.75907073685105	0.000170545618616401	0.00482862824701357	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04243307638584	0.581381506691384
Merged-chr3-8729109-4	7.17971769748916	0	1.30741242899078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90456874-4	9.64157383575668	0	1.28195590839463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48418151-2	4.25542998514669	0	1.36148732543399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18887099-7	18.6105864127817	1.0792500600643	0.371949893899603	2.9016006665554	0.00371261472982133	0.0519448659764244	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94255155241943	4.98309625756589
Merged-chr3-84129398-3	9.29790669961808	-1.76840585220488	1.08543467325387	-1.62921444816539	0.103267629416988	0.636687893439036	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41061832075265	0.382164212378408
Merged-chr3-144706605-3	5.40138053819421	0	1.32136959087916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143814108-3	6.11857768690869	0	1.29528026989271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-78256093-1	3.77494888337034	0	1.31888727139195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40937822-3	6.63357028644147	0	1.31050008106604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47744574-3	7.95244001865487	1.24494010956643	0.731564672922103	1.70174990078969	0.0888022616775286	0.566698300459642	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56215037586398	3.78909218093642
Merged-chr1-172490445-9	33.6291316821289	0.802083399738909	0.353366312380184	2.26983549828585	0.0232175658711251	0.210660241518265	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01920938862402	4.84879081289016
Merged-chr4-125146384-2	5.90068613886606	0	1.3141584162236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90754229-1	4.71409447415001	-2.62807405023496	1.14247423762258	-2.30033550314781	0.021429219754845	0.197700662727672	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3317122347257	0.683637474991079
Merged-chr9-120064756-1	1.8151439599949	0	1.49355448821042	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120136394-3	7.59292966601761	-2.1619780279621	0.644870263370708	-3.35257826382246	0.000800626017350831	0.0159944077437504	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05359134900935	1.93871841517079
Merged-chr3-82029398-3	4.00289983035708	0	1.33469870695244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62044249-4	10.6562231437698	0.110518387372264	0.513968188674497	0.215029625972157	0.82974422059788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68310071094265	3.67080905240859
Merged-chr18-32485132-6	13.9733341507716	0.131400869334259	0.387304723597281	0.339269989051023	0.73440634861173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41298551604257	4.60472309618678
Merged-chr8-27253873-4	6.38512299983543	0	1.30873832300988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51349825-3	4.94336433349957	0	1.30961203495617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58610202-2	6.75616478791704	1.46383479400387	0.548795293836472	2.66736032623496	0.00764496588016569	0.0897373702901576	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19972965967537	4.64178918619308
Merged-chr8-46142874-4	4.61761198155326	0	1.34453516849044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69465893-4	6.62693836268632	0	1.3331644073019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91043585-4	8.14157011213419	0	1.29772260540408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87172279-2	4.91569415582973	-1.9990380386811	0.986220851888813	-2.02696793000527	0.0426656925246904	0.330993855284114	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4162493139219	0.683637474991079
Merged-chr8-125870958-2	4.13492569990813	0	1.31135955684043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45146678-1	5.45658630474053	-1.44496458402936	0.852902646537504	-1.69417293977856	0.0902324252966484	0.57390773442036	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73207471829726	1.52860153008918
Merged-chr11-32671624-3	4.2605626275832	0	1.32191566192776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67245651-2	8.85378462175654	-0.987404984379416	0.530776809319178	-1.86030166925708	0.0628428575301233	0.438966260626771	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95065076556111	2.97271600034478
Merged-chr7-97034372-5	12.8445258351422	-0.874765638289721	0.431231227080034	-2.02853036458644	0.0425061474991177	0.329999609656332	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13069644953071	3.43284469777732
Merged-chr4-55838635-4	4.52608390860388	0	1.3655243684732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94731785-1	3.3057370127873	0	1.33280655449609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20508331-1	5.54656571510333	0.730694811707228	0.573830358739488	1.27336380966723	0.202888973339865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80842280571606	3.51925904886557
Merged-chr11-105496840-3	5.56388486587646	0	1.31206003284647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24778572-4	7.69212693082534	0	1.32565368970435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108433030-3	4.26410534173983	0	1.3099098404472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62843243-9	24.9410552697652	1.53871411052236	0.380733149450459	4.04145032483592	5.31216349287137e-05	0.00191044928786556	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97860965935426	4.61970624227407
Merged-chr5-23969083-5	14.0184111706378	0.632725034954678	0.57893001126321	1.0929214631214	0.274428283745584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84103050525603	3.87836268240475
Merged-chr12-80835156-4	13.5356770975296	-1.94841812828857	1.1131214086034	-1.75040935627426	0.0800477027009839	0.525285918929353	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15115212900675	0
Merged-chr17-70748188-8	24.5004797268932	-0.26049024089472	0.336368956932593	-0.774418196227664	0.438683526526098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70732727885708	4.52398904475266
Merged-chr13-43525053-2	7.50816066171383	-3.93998079715879	1.09309151043347	-3.60443820078373	0.000312828871365429	0.00772274855619393	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28078644863412	0
Merged-chr14-63382040-3	5.30658911551818	0	1.29718156211217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36572956-4	7.9659288497861	0	1.29737582648612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44055687-1	2.26633564215661	-1.12447253676214	1.31140665191315	-0.857455263873873	0.391193328470464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913467560099968	0.306240821987646
Merged-chr7-116370559-1	2.78858658782768	0	1.37120473365721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92028253-2	7.82743099546501	2.14344918902002	0.814859389941413	2.63045283085482	0.00852712018821569	0.0979614179001569	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08202248547146	1.8850522765678
Merged-chrX-52453501-2	3.05861748214464	0	1.37694491152516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111341827-4	8.90637577817667	-4.09273629909693	0.851473213201251	-4.8066530287073	1.5347801457146e-06	0.000113967890229393	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76685696296872	0.73596151290311
Merged-chr4-63572928-2	3.406837247732	0	1.41567741326165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60937193-1	3.49295694684513	0	1.34886284219615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41375245-1	4.24787263300237	0.208787214287627	1.04709379157937	0.199396860115755	0.841952316435218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22617956717324	0.793480537552656
Merged-chr17-84320803-1	2.29225913525243	0	1.4970374980842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50943355-4	5.01926264059372	0	1.29909823687061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125147559-8	15.6398518639488	-1.33367559326028	0.640460195524668	-2.08237077429571	0.0373086158231062	0.300316433798558	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78357638060365	2.17540470129796
Merged-chr2-90517297-1	3.44053634160477	1.90996674490941	1.28087810323253	1.49113857133577	0.135925117421207	0.773774956268505	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr14-61649340-1	3.49139559379791	0	1.34054390361781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71806643-3	5.36441835724061	0	1.32454006805794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90047912-2	8.01234668811362	1.00281364420278	0.558143202762786	1.79669597199947	0.072383898781048	0.487880170164659	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48279877989784	4.2358485425769
Merged-chr15-58623680-3	3.94642111474537	0	1.34552509104198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24695907-2	4.60585761445637	0	1.35351689670057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56163139-3	6.56955302148053	0	1.31008479483247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8779009-1	2.80880724569247	0	1.3961194796524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85978230-1	3.83267144131207	0	1.39083191130192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149690532-1	5.216504749955	1.35259942381489	0.886346369408126	1.52603933462052	0.127000068773515	0.738274752608677	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08675147527866	3.02077291728084
Merged-chr3-14917437-1	1.64405223265986	0	2.42986279788879	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115500900-1	9.01918786023515	1.04785962624555	0.514260115350099	2.0376062521049	0.0415893262888411	0.324656088361081	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91372037650623	3.89266518198648
Merged-chr17-10425532-1	2.14124122479783	0	1.38641613914919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131036545-2	6.29024376728559	-2.82794247486066	0.812194852101605	-3.4818522520097	0.000497958361328562	0.0109580679624942	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72735888102352	0.666688015277142
Merged-chr2-94268551-1	2.26745242212961	0	1.46630835076037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75654027-2	5.58279154810935	0	1.31874546395087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-21718406-1	2.71066478823811	1.44933062688443	1.07353136696868	1.35005894702163	0.176997075388207	0.932896506558943	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911512212923865	1.780058382249
Merged-chr2-113399084-1	3.29024639323976	0	1.34440529322311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165589358-2	5.55977497251704	0	1.32418749827685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-77605271-1	2.6298003784873	-0.525938344737472	1.28521275991409	-0.409222784850525	0.682376174865417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48088562581713	1.93051054667104
Merged-chr11-20068555-1	2.21533387030395	0	1.37957097859735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35055612-2	5.2692144341715	0.443754242472611	0.874762974678935	0.507285122161787	0.611954776122678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28443119117854	3.14281375482221
Merged-chr12-99639985-1	1.76299941553627	0	1.53144409463146	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-36953312-1	2.80420910392548	0	1.34104846564853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62693460-1	2.7045804461928	0	1.38474041801978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136331597-1	2.64855066305885	0	1.39669774492021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134622817-2	3.94610293034227	0	1.31772001459641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17781988-4	11.7650237923637	1.765057612094	0.756263063052332	2.33392016393093	0.0195999027058315	0.184470004639963	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17099483890549	2.11349282353426
Merged-chr11-117663681-4	7.11994889203842	0	1.30865148856101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52533852-3	5.57754517245109	0	1.31118132703659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50906114-3	11.5841125580212	-0.586659139112123	0.456206501387683	-1.28595085192261	0.198460214797333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03701392250937	3.36370161240446
Merged-chr5-90655565-4	10.9846704105558	3.18762425591993	0.62310509898587	5.11570882842705	3.12564916478069e-07	3.17156320375402e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22617956717324	4.24034181434276
Merged-chr4-74305450-2	3.68065529629493	0	1.32765199613303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32607489-4	12.2516537353914	2.14067890626256	0.553428183507825	3.8680337757542	0.000109716470507632	0.0034108146916231	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76648195120462	3.88460648235744
Merged-chr3-87351275-10	40.5578273525064	0.161001430322514	0.26834625900013	0.599976429417769	0.548521944207032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.29528044271399	5.48122075701934
Merged-chr17-34657558-4	9.32358314976186	0.236886558887892	0.937622483602748	0.252645988156846	0.800541789146444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48990349589743	1.5737989534754
Merged-chr9-44213764-4	12.1636533881285	1.15086181548733	0.444549119971141	2.58882936392279	0.00963028018987196	0.107867721852481	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72428546697026	4.2376280810944
Merged-chr9-51044836-2	4.17061697283761	0	1.3267307941857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3775700-5	23.8643513560831	0.381181445699482	0.36178589751642	1.05361056999791	0.292061247888035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60295357806761	4.974375953932
Merged-chr11-110473595-3	6.26593940541959	2.76640469433379	1.17765667758762	2.34907570855085	0.0188200796988606	0.178778445704571	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.963545719069792
Merged-chr17-65907125-3	7.25573664746973	0	1.28839754572374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9681289-4	15.5593104080218	-0.335089438309559	0.469188101829268	-0.714189974134285	0.475109715590252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11991378262368	3.82198168006053
Merged-chr12-32157102-2	4.8156258024001	-4.64609285665336	1.09693018960635	-4.23554105874385	2.28002035464904e-05	0.000975298604093234	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37875196360124	0
Merged-chr3-100999174-2	3.83271311274572	0	1.31731947601698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112217794-2	5.35880979560571	0	1.30934957819833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60820529-2	6.95794861927467	0.467935319667366	0.82694840259301	0.565857940108586	0.571490355485769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07661877997994	2.22638694323761
Merged-chr19-47890825-5	9.12996421600308	0	1.28724247920207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80109541-4	7.67467733809627	0.0828251257337976	0.545144049530033	0.151932550314364	0.879240134869402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14498403715411	3.33405435746552
Merged-chr13-119809761-3	6.50624085766974	0	1.30637667550742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32561610-7	15.3967621522893	0.585377877599168	0.51805359117749	1.1299562199128	0.258494672600007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81085977403228	3.48084933888322
Merged-chr14-101542556-3	4.76983580119097	0	1.32757871773063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125265156-3	3.94801539982797	0	1.32560062568157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33666354-4	20.4417941815577	-1.79487220087247	0.636183756033259	-2.82131095591607	0.004782781742817	0.0628839558036609	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64305637410432	1.32852444445417
Merged-chr11-49082168-1	2.98941500630719	0	1.41281838070575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193138866-2	8.07660727296009	1.4458155767411	0.642213126988556	2.25130181240731	0.0243664280969565	0.218391979966303	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89599122722382	3.09282950292299
Merged-chr7-35712277-1	2.49845691224636	0	1.41783936211212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43741703-1	4.1351755589514	0.536298586067735	0.99209561245472	0.540571472482156	0.588802985258145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57826847573626	1.57074540165941
Merged-chr2-157036510-2	4.47569209367115	0	1.34095801594042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121318486-1	3.48841254482574	0	1.3410192935318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25446016-3	4.43416529779465	0	1.31199839705727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55598186-2	3.66301912333094	0	1.32753936786378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119929963-5	11.0442853843839	-1.53109249806818	0.573652150673682	-2.66902598773508	0.00760715640964441	0.0893899015904736	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08109958519094	2.32928830729835
Merged-chr10-8770977-5	9.6326192017599	-4.31728869362126	1.06577746828828	-4.05083502145637	5.10351821040305e-05	0.00184996544464607	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27014063220915	0
Merged-chr7-129501567-3	6.43188736242919	0	1.3361338013089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27586772-4	13.2652695869898	1.35065860759784	0.5254596063445	2.57043280071337	0.0101571530485434	0.112256706538699	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41241481029233	3.70414898864677
Merged-chr5-105706841-1	3.21812804177754	0.963390412334879	1.24326265086008	0.774888887451428	0.438405319122432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.683637474991079
Merged-chr14-20785487-1	2.81805565449769	0	1.36513861715614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120041073-3	4.13823184798889	0	1.31392170142435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44456209-4	5.08571671355352	0	1.31569006847155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112000626-4	4.85846277501812	0	1.33459583797376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93051130-7	18.1042603257941	0.254891901189317	0.312573020179559	0.815463538864911	0.414807027009252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65704704669648	4.87693871724216
Merged-chr3-65680787-3	5.08252358937071	0	1.32641310213281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150570487-1	7.406761245143	1.18865417490926	0.577940440097418	2.05670704529502	0.0397144140686001	0.314910581449671	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73204111692257	3.90060980028702
Merged-chr6-31457153-3	5.89518466831066	0	1.31584444890513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-14546001-2	3.90745571793304	0	1.33584457628567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23399759-4	7.32871232675607	0	1.30927294462968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122925692-6	16.4923749831389	0.685673239005593	0.416208870843651	1.64742581679179	0.0994705524948265	0.618223580305015	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50356497068857	5.14736412963697
Merged-chr10-8743082-6	13.2033612683646	0.0348006568559643	0.502222911515791	0.0692932481931783	0.944756199982642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76178018452446	3.50077232202928
Merged-chr13-103974165-3	4.53446706698253	0	1.31587733746966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57370594-3	7.22805586350942	-3.04957184331594	0.876855099557903	-3.47785152284966	0.000505449818972182	0.0110650331224644	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60637251529399	0.581381506691384
Merged-chr8-71291034-7	22.4789046039865	2.5902787153871	0.607544444215631	4.26352136053401	2.01230254055185e-05	0.000883709151981863	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56130786607251	4.71411105738223
Merged-chr5-75877594-2	9.18397595596595	-2.01616274234192	0.661983831290764	-3.04563744164373	0.00232187630518223	0.0363791049819046	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83227640544562	1.84001395625789
Merged-chr7-24838899-2	4.44313944499214	0	1.34964088647152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67996682-1	1.7720250823663	0	1.43406665219615	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78668492-2	3.85994155102848	0	1.32256801666432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60682929-3	10.2159279828735	0.328011946588986	0.535668782299307	0.612340979030038	0.540312182433863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16469708690234	3.33588374675345
Merged-chr8-22357480-2	4.24917167858194	-2.07393305420301	1.1801836684199	-1.75729685954706	0.0788672228156431	0.52004616973875	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13759966774802	0
Merged-chr13-28482050-2	3.97835881720013	0	1.31240280757223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20696796-2	2.5729760747994	0	1.41157314692475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-137416224-1	2.06944179181762	0	2.17194557857805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55589391-1	4.23253517210938	0.791429615160294	1.13409887413165	0.697848867689132	0.485271714407481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	0.905469781553611
Merged-chr7-107668741-3	5.90353926089783	0	1.35298838899999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125420078-2	3.47098993476115	0	1.35180569641648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117955863-1	4.15494941612957	0	1.31323772014806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46791302-1	2.4961157518654	0	1.35536780548261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120716840-2	3.27806879516678	0	1.31967756993931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8777869-1	2.07302742868049	0	1.40647039808918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118512834-2	3.51854497061827	0	1.33980605179922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31005101-3	7.70853781370348	0	1.31324367542488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8681240-1	2.94325270697392	0	1.34426606031656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68056651-2	6.70757779290469	0	1.31691818659445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35898186-3	4.84777317289282	0	1.31005199660749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94054476-4	7.85045187054469	-2.87870595611274	0.828652084630523	-3.47396212416009	0.00051283341920205	0.0111929233838267	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11955011024897	1.29606516661881
Merged-chr8-69023540-2	5.17901293758557	2.48817376273148	1.21267749575397	2.05180171269236	0.04018893680216	0.317363899005915	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr5-42967092-2	3.79657574216302	0	1.32876199045119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180318643-4	5.81062032030875	0	1.30142696424301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47802581-2	6.67020368541462	-0.443611230931691	0.898990566933705	-0.493454822829531	0.621691253701413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37571968000285	2.48214031441837
Merged-chr7-75774748-2	3.9057863701455	0	1.37556931673701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12279552-4	9.06106322680112	-0.536522442914204	0.70769014317633	-0.75813185768863	0.44837204969325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77133209526455	2.01628926503709
Merged-chr2-166703136-3	6.28638176813023	0	1.32208651088284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128754498-2	6.32724949557484	0.114711708309438	1.29122550464296	0.0888394071345093	0.929209539127253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr13-108300565-1	2.07741617190888	0	1.44824470437962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74868419-3	4.85384111765175	2.45643791724115	1.20527740603617	2.03806850185611	0.0415430826729352	0.324527708349745	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.918668513615376
Merged-chr17-33995149-3	11.564113926255	1.78498658374304	0.702652297044548	2.54035543789003	0.0110739863101584	0.120026772919122	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18404216306323	3.89428382411787
Merged-chr3-95517680-7	16.2308991969655	-0.33852905029971	0.36605003678941	-0.924816326393289	0.355061456655997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42127123725493	4.1019202607747
Merged-chr4-123921962-6	9.95553485031293	0	1.29097411790442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91271378-4	7.03182428374844	0	1.30366652275957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92215549-4	10.0101906178345	-0.0950336484311672	0.557420220058198	-0.170488340773223	0.864626102850952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98836800006564	3.35796335179504
Merged-chr13-43547046-3	4.65587903181071	0	1.33276206253818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20067504-2	3.36217081773232	0	1.34852630998715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135269333-4	6.55885945841957	0	1.30158542818438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93069726-1	5.99644380364189	0.643667754312552	1.00586179150546	0.63991669605939	0.522226758764472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73636429159557	1.65423785335698
Merged-chr11-59224630-3	4.06193423320649	0	1.33137631320918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67797794-4	10.6576206129863	0.382545785417296	0.484203629581549	0.790051461918808	0.429497714788616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88946289828406	3.43885280695556
Merged-chr7-80084498-1	5.09173505759401	3.76545487407315	1.06766463874233	3.52681426117918	0.000420591702386942	0.00965027576691613	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.82361065065357
Merged-chr14-77511665-4	9.53668690530907	1.21846592221523	0.763487959710302	1.595920284948	0.110506591991006	0.6687501167109	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13907459577552	2.27643187026249
Merged-chr7-75859972-1	5.21738220483817	2.24461820263893	1.15964080341784	1.93561505944195	0.0529148645577898	0.386101180980416	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.37490486545505
Merged-chr8-80265134-3	6.89281765654383	0	1.32326556894858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25003052-1	7.45729415570704	-0.738460962667535	0.55418510889179	-1.33251679054359	0.182690427765955	0.954588892755006	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85557678327184	3.13780091253444
Merged-chr6-108775951-3	10.5582154955785	-3.52956899654881	1.08975392666448	-3.23886788584659	0.00120005146533077	0.021838899417054	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02852593588984	0.420961122473315
Merged-chr13-51958555-4	4.68416156948348	0	1.37901526726264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135615472-2	3.12735816501312	0	1.34470855847003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80849926-3	7.56742463953199	1.5665342110199	0.673787328429703	2.32496834671971	0.0200736528156494	0.18779466206937	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54028323058519	2.76670770598174
Merged-chr8-120702232-4	5.68964220012189	0	1.31202290192972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58859127-2	4.51125597340689	0	1.35704866010679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36431608-2	4.68804454993068	0	1.31260439865681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11465132-3	7.60143151881716	0	1.32537451992483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71323504-1	3.06923572182373	0.915742535977271	1.1987253568757	0.763930228658894	0.444908822239511	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.741231840258805	1.29684500016202
Merged-chr2-119242500-2	2.69546921707876	0	1.37569355193624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92957186-1	2.58003295096359	0	1.35826783819266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70703967-1	6.9687473866559	3.92389093971586	0.943431512282391	4.15916883062662	3.19407752782647e-05	0.00127325830780782	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	3.7786634928456
Merged-chr3-38461952-2	2.09036707784721	0	1.65469452759789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14648137-1	3.63941552599765	1.6987841980439	1.02971443185366	1.64976244431751	0.0989915328182746	0.616053449327617	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35023920661507	2.43067782037622
Merged-chr6-142994414-1	0.937187262500315	0	1.68054912326317	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30927435-2	3.26369582983871	0	1.41260700521532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138134470-1	3.8133375657508	0	1.33316535567067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75828111-3	4.08381249097975	0	1.32242805033388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96623838-1	3.7384869812584	0	1.42323076781615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116876270-1	3.05789018382993	-0.849373362982491	1.01223944208665	-0.839103207865102	0.401411396138888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39390512385733	1.31734301959449
Merged-chr18-65587387-1	5.27656066633355	0.758219123512329	0.741691518793621	1.02228366416484	0.306646662629539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77067593511401	2.27589464621145
Merged-chrX-71265269-1	1.62303212776014	0	1.6005934451153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141963353-2	4.32820546883974	0	1.30658651062404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14702402-1	1.70029705182656	0	1.50512740771889	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44639162-2	3.58509745397923	0	1.35576931715589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12178441-2	7.01353114074512	0.595450105920758	0.634065611548926	0.939098564998918	0.347680140973526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6201378336203	2.98380461488337
Merged-chr13-3782058-1	4.24629449203188	-2.52258409065902	0.989441853267243	-2.54950210801087	0.0107876858900695	0.117590861817153	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41756121704147	1.15692263537643
Merged-chr3-103695687-1	2.31236119070735	-2.08995776034269	1.48664638681062	-1.40582036110576	0.159777474325875	0.867222051864398	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11244595875198	0
Merged-chr14-70659304-1	4.24288822308991	0.295527091324769	0.865186359107463	0.341576225993252	0.732669831109391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89234612949567	1.66069583796294
Merged-chr13-36696489-2	3.26733987008444	0	1.47562061129964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100471282-3	5.48994168059018	0	1.34259772539928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106643357-1	4.99845114341978	0.821051850090763	0.885598708218569	0.927115004201344	0.35386682667168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49640498863299	1.68089718199588
Merged-chr6-115317155-2	4.93765056842661	0	1.35626031973681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131549182-3	4.02268010817132	0	1.40258331354072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124588919-1	1.38828184064613	0	1.71817097061214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84958783-1	1.49732348739919	0	1.64172614953099	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83619008-1	3.16111886159063	-2.45580893677779	1.17776207626451	-2.08514859348065	0.0370558144876929	0.298723075932986	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2722993059771	0.469435083901436
Merged-chr17-5783455-1	1.80455916807247	0	1.43574825353555	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48943922-2	4.13708012346121	0	1.31173900012812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78228386-1	2.02926205400196	0	1.37439515540536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87036658-3	7.17406471816782	-1.69642108570802	0.673941240819398	-2.51716467691674	0.0118303520624553	0.126009158251541	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67101815998894	1.85375318208663
Merged-chrX-142377551-4	6.44441644023103	0	1.33320787040784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51156813-2	3.83569622061668	0	1.3627752179836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106165564-4	7.15471449918654	0	1.29822312304306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9027985-4	7.74322394635006	0	1.28802199063601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4394123-2	9.0774152162025	0.679978535122632	0.490733982922887	1.38563571870971	0.165858165673364	0.88943138313335	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83354280961847	3.68424607840581
Merged-chr2-129184013-4	5.23924313810208	0	1.32900134296234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72323802-7	29.7079810370366	1.774695962206	0.3106241761842	5.71332207301728	1.10791706358843e-08	1.93577402238636e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66127929416071	5.29515922859045
Merged-chr5-140736352-2	3.11774826248189	0	1.36985851813028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74948112-2	7.36774736325793	0.435600894215324	0.675569621431463	0.644790529941725	0.519062939720394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66679107832348	3.88111298863793
Merged-chr10-68130268-2	6.20404480480302	-0.849222827492126	0.858406005752432	-0.989302057302994	0.322515377800293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93858137748242	0.735627456805112
Merged-chr13-52080022-1	2.71154440085226	0	1.32950590086629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45852956-3	4.6534936442291	0	1.32407934634213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35298111-3	3.85744474438529	0	1.33318246364146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116010716-2	4.68115473094655	0	1.30357369435933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81077757-2	3.46709153702553	0	1.35169790816883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8680638-4	7.24764201280563	0	1.29777353856724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94917354-2	4.3980330804279	0	1.31022272719633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143132063-2	3.68797818872744	0	1.3488112703992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3373150-4	12.4758554407411	0	1.33798955578234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30642240-4	13.5718961892227	0	1.32117825089131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134094821-5	9.55851152708935	-0.572642314955517	0.605346961547022	-0.94597371644862	0.344161992281181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45115382899897	2.28319444952064
Merged-chr1-152540006-2	4.4080608493053	0	1.31496079173323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50114336-3	9.12393674597275	0.594112533419857	0.734169884340969	0.80923032405935	0.418382675472868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05459652687672	1.67709642602482
Merged-chr4-133493963-3	12.9275568058584	2.38370090958597	0.625329794599841	3.81191001959428	0.000137897078704924	0.00409034158195732	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57500719330485	3.80777403487224
Merged-chr5-21358815-3	4.28483611066411	0	1.32648029787999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180429107-2	4.76473027793828	0	1.30602960223859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53558150-4	4.74466127034099	0	1.34138297945702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26235607-5	11.363576099816	-0.435029376035149	0.830593614181522	-0.523757188362004	0.600447433685229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43002306404934	1.08764913775046
Merged-chr10-83922815-3	5.80279697452308	0	1.30810292563287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6223056-5	17.1480282140717	1.14827300422138	0.611298333546248	1.87841670949771	0.0603241814199586	0.425282550336457	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74021110813114	3.30316893960524
Merged-chr1-154003881-3	4.40569814375362	0	1.31139216744754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128743685-4	12.7155953821584	0.665525455391559	0.519402231053617	1.28132960469101	0.200077918600094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14929179098179	5.12944436823641
Merged-chr12-84803232-3	5.10038678477565	0	1.34371666822054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117710777-1	5.51995313096736	-2.09584213325584	1.0210357801125	-2.05266277056904	0.0401052951287005	0.316912432613687	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0134338212213	0.729295484888209
Merged-chr1-16203223-2	4.10868230660683	0	1.35571113122996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112321600-1	4.41855030174921	-3.00320453460382	0.975792068915958	-3.07770951442574	0.00208598144975681	0.0334422335171267	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75884974064957	1.33962963608869
Merged-chr19-36903023-2	2.49621038160379	0	1.38882556577061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13306982-2	6.52780031788386	-0.844056060821798	0.848031040693129	-0.995312695313509	0.319584205161991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33468858267927	1.40918939303534
Merged-chr11-74993259-2	2.45681721813972	0	1.408711861084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65772341-5	9.468105145805	-1.46476214292899	0.726975585295519	-2.01487116287895	0.0439181502261652	0.338388803758871	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79918221801186	1.35032549026822
Merged-chr17-25914118-2	4.89314576446006	0	1.34087229548259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69953433-1	2.76336636139588	4.4235935229298	1.21249612426398	3.64833621683948	0.000263944082221448	0.00674491576413813	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.10015108892538
Merged-chr12-56301819-2	2.82552654758459	0	1.355055081156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9014670-2	2.08822895637901	0	1.51276146648733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23419145-1	3.19355832707684	0	1.33585340213254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75184521-2	3.94847109222152	0	1.37054763972294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-12535742-4	8.77507495444624	0	1.29947912196187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39272073-2	2.76715567743459	0	1.40761870998955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61181292-2	5.47120679021906	-0.0876457225118621	0.876198478353895	-0.100029530611057	0.920320880977987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38495392432751	1.56586581096048
Merged-chr2-25305160-1	3.91133500561887	0	1.32493306547229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43279972-7	23.0176373726234	1.80817225158463	0.459921897765863	3.93147675804977	8.44256593711276e-05	0.0027645909121756	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51441977955305	4.57096228999048
Merged-chr3-127077581-4	10.5467516777778	-1.1245612715676	0.901631358319923	-1.24725173008965	0.212305210446909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46451048047305	0.733321818366247
Merged-chr12-40548023-3	5.02031067026715	0	1.30443160562569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60964138-4	4.49071471941244	0	1.31648187486804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121124445-3	5.92760332424695	0	1.31339256701105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89227938-2	4.69947602499453	0	1.31718844331834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38799541-3	6.88378982261849	0	1.30439480118498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100850796-3	7.81788230654981	-0.602919806107481	0.849285304639201	-0.709914327745983	0.477757264922696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72438554579369	0.905469781553611
Merged-chr13-112752416-3	6.64299938073967	0	1.29486945472677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99152384-4	13.5719018883343	-0.29110515072175	0.463956664123282	-0.62744039095082	0.530370598426776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65088395076236	3.44859223936632
Merged-chr14-61549794-4	6.16622120766053	0	1.31052004215043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149068324-2	4.56266424885832	3.13646758340635	1.02159547748822	3.07016588514852	0.00213939908136784	0.034131145598404	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.05753712172178
Merged-chr11-3135063-2	7.05451081170496	0	1.35387520932185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37197073-1	2.44067672220061	0	1.35794155552761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33722184-8	27.2661588249512	-1.03235186321342	0.337584104489455	-3.05805827195181	0.00222776251121164	0.0352025419619629	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.63044577812018	4.5987531706459
Merged-chr5-62889541-4	11.078968901038	-2.51851153498056	0.736610477599865	-3.41905472643663	0.000628390866380663	0.0131359019688134	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12229912210824	1.21444166002597
Merged-chr9-61627977-3	3.54372558106545	0	1.3587098063029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21736442-4	6.2927465214308	0	1.31366997014274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11652860-4	6.35807070030475	0	1.35713792424528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83156241-1	3.16671238544854	-3.13547670841158	1.12973379527327	-2.77541197893717	0.0055131820670209	0.0702712337683542	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19704518833544	0.609949614787909
Merged-chr11-82747207-4	4.89984600830619	0	1.298657839925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47707956-6	12.9105080032592	0.464328707061058	0.406633652828759	1.14188460259239	0.253501989615373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77174793413546	4.13827123310306
Merged-chr8-117537092-2	3.15814518950677	0	1.33859039852769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52098823-7	14.1342573886994	0.707788170617001	0.478698704124588	1.47856713318528	0.139256042316611	0.786501758100371	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4400518068726	4.28040148998732
Merged-chr6-82044719-6	17.5659826709224	0.0589008869954795	0.420448262725438	0.140090689431492	0.88858833680759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39648070032302	4.7061783117699
Merged-chr1-162626163-5	20.6331956766834	0.326032231844867	0.316965063136463	1.02860620857921	0.303664759297151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.07478325266493	5.53109765450722
Merged-chr14-45632914-3	4.17573972721598	0	1.33081965116172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33678977-3	4.61153907620096	0	1.34779791386569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14800061-3	6.43115879588089	4.09526299343846	1.03271019688793	3.96554910155775	7.32271754800953e-05	0.00248061327575029	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.42194161705889
Merged-chr13-64254389-5	16.2514716045831	0.0244672160092994	0.618735003391034	0.0395439337926651	0.968456726789643	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35205849426872	3.05726306384182
Merged-chr2-90557035-10	34.2668443603419	-1.35518446309218	0.369974206773943	-3.66291605814621	0.000249360271733887	0.00646433117854946	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.01027732094141	4.71141727985307
Merged-chr6-124271270-2	4.39381939431381	0	1.3115715062655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59316713-1	2.92698444824759	0	1.37842716322535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104132691-4	9.54606260580616	-0.333240489207869	0.85198906172669	-0.391132356244697	0.695699405065529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45047938170373	1.4217268527323
Merged-chr12-108639853-3	5.63732221583948	0	1.30953307423403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43322725-3	9.37087606565746	-0.73094294869474	0.623672703731969	-1.17199765890167	0.241197996070826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82717487013017	3.2838787288397
Merged-chr6-116123457-2	3.63645257543292	0	1.33918741770056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122545458-2	4.60918826246591	0	1.35498620892558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192101506-2	4.5025611251219	0	1.349672829539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148520922-2	8.44987399085724	-0.603227281752143	0.637199102522487	-0.946685705243684	0.343798956696693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73102217362715	1.60139579763857
Merged-chr8-81769335-2	7.70215443520964	-1.57434669183932	0.559672155814445	-2.81298019828824	0.00490846737248199	0.0642011026665748	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05646364590585	1.75238521850622
Merged-chr2-73037427-3	5.66691698388615	0	1.32700746790027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126707887-3	4.96684665674354	0	1.32098066366114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75229219-2	5.81596605926731	0	1.30616492542811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145794736-4	6.66023434910069	0	1.29382336645245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40687550-6	14.7049562334372	0.252510996029014	0.517784235150681	0.487676099206711	0.625779283682606	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37349275915308	3.56969454758504
Merged-chr8-115160087-3	5.69982859975743	0	1.30945921421775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38469406-3	4.60060796380506	0	1.31792248148132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30408880-2	3.37849701820748	0	1.3281898932437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72943605-1	1.88382017638755	0	1.40346401824302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54317456-3	6.92748414886088	-3.45587026872487	1.05483947715466	-3.2762049046996	0.0010521219772201	0.0197847374743668	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08240937934315	0
Merged-chr6-108232253-3	3.90523193172729	0	1.32371399367314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108626615-1	2.9039434036716	0	1.34135127384447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96589387-1	2.07433541585181	0	1.42461497963003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121441236-1	4.37350902486442	0	1.30743225483156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51453811-1	6.29976360591141	0	1.29303078065919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19065447-5	10.4949179331119	-0.0547972820180286	0.609183150952235	-0.0899520643871602	0.928325307409763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97233955810293	2.81435536777735
Merged-chr6-136489510-1	1.72919910249635	0	1.4312822218411	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122930677-1	2.5533881261453	0	1.35215994623217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47905763-1	5.78879191240467	1.5081504584101	0.892649710289294	1.6895210305074	0.0911196251105509	0.577975443843337	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66512106554869	1.98985104447796
Merged-chr10-40138209-2	4.13385427272287	0	1.32459560050998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34243583-1	2.11623121830418	0	1.43618887953988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88035634-1	1.2604260172535	0	1.74977660263327	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45388631-1	4.63213564913443	0.104833864494989	0.730180489620015	0.143572535811721	0.88583802917635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26283591614165	1.62042974503458
Merged-chr6-96071257-2	2.50479690393741	0	1.42928367363654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80938270-5	13.2990397941284	0.384398465582226	0.455084629323973	0.844674684252134	0.398292497774083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23241581047689	3.53698851098525
Merged-chr6-139191874-1	2.4598059017891	0.0171631505212	2.15460393079534	0.00796580303038086	0.993644275963771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22145229803727	0.905469781553611
Merged-chr4-63159115-1	7.28701616755358	0.917199024760322	0.587411227487644	1.56142576416726	0.118423326848381	0.703755066954737	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93313592216817	3.05493980485882
Merged-chr11-8564580-1	3.50299654162699	-2.50945098863968	1.19564941990436	-2.09881838845405	0.035832913219143	0.292273894279403	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41981354472412	0.306240821987646
Merged-chr19-32935782-2	6.75411571314785	-0.861328468625987	0.750385794218005	-1.14784751425578	0.25103151852394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78252639184861	1.63267172601457
Merged-chr18-56427898-1	2.35919271305963	0	1.42203328206539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-20013492-1	1.4622580235235	0	1.46337969376412	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83231275-1	5.88695950121939	2.14673971283231	1.00754346143362	2.13066710767767	0.0331165766990818	0.276186996256856	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61092086469632	4.04876993946
Merged-chr6-89336467-1	2.10670758268851	0	1.43772775197812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77001733-1	4.14166899226712	-4.31154581667545	1.06967507344004	-4.03070607489213	5.56095488419324e-05	0.00198138581168207	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1161546048108	0
Merged-chr9-99386816-2	4.97597327240691	0	1.32846008185787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-47928224-1	3.62323178145204	0	1.33972540237062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120686683-1	3.62105830826617	0	1.35322862557234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102767996-1	1.89017044781943	0	1.51736335044648	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-45047357-1	3.90511250951082	0.564956939744685	1.0575504090446	0.534212775970718	0.593194330910716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19057300362564	1.73775798795819
Merged-chr6-126792288-2	5.83796401762201	0.406908506488062	0.691552564877239	0.5883985211743	0.556264830131974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41012042177855	3.0168170302573
Merged-chr13-9634980-1	2.59349909055953	0	1.43048591953328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60016347-1	1.10763440087859	0	1.84343511305293	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145337706-1	4.58003897178999	-1.18098318259019	0.824163669074107	-1.43294739492332	0.151872871325445	0.836660418471973	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85448832039312	1.82866868473699
Merged-chr4-148167286-2	9.46185636520356	0.0198136911085451	0.497405161022938	0.0398341084113346	0.968225383222376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61492836891605	3.72428785753938
Merged-chr10-18917214-1	6.26209397484193	0.757315286789624	0.859602079164975	0.881006811343786	0.378314133353769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67822540167602	2.31002630312988
Merged-chr2-6336125-1	2.24383199790802	0	1.40779446484529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117300582-1	1.9662307253858	0	1.44951192610237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63596260-1	4.4870411281604	1.31490453760082	0.899920680655315	1.46113381530838	0.143978721819424	0.80405923088951	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54117101589342	2.60391341779232
Merged-chr3-100430490-2	3.66600490151293	0	1.38784996395006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159509164-1	2.1235784417522	0	1.42019036429784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142341354-2	2.45523776486247	0	1.43953191888235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21264323-4	13.6054708089368	1.75152516235451	0.54608769035597	3.20740641711366	0.00133937629644214	0.0237640194046452	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86974585022312	3.7277940315122
Merged-chr6-100799433-4	8.28467838973308	-2.57193828593388	0.80936378163885	-3.17772841370052	0.0014843371949566	0.0257829607500356	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59084537609397	1.27465395918041
Merged-chr1-24700618-3	6.12754731883795	0	1.3085648026112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100520891-3	4.49955962420722	0	1.31567895109838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20839006-4	8.30253201428606	0	1.30119931663598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125462414-5	10.774293665703	0.200141130074224	0.552074820673527	0.362525372611729	0.716959466568093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41602230781182	3.67529500993928
Merged-chr19-37308006-3	4.25432505893823	0	1.31094400941923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66680151-4	6.23783741015484	0	1.319699973183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31082786-2	5.47379296889085	0	1.30998197385368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123664877-2	4.45646617654486	0	1.33700114223864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88719022-2	3.83983791975945	0	1.339526381953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95826646-2	6.20573323411613	0	1.3182493357562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62190952-3	3.66104293359252	0	1.36118710827007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95862026-4	7.05784542195706	0	1.30602559295732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73621914-2	4.34382098279017	0	1.31897482216911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47160193-5	11.3846061096859	-6.00068154788041	1.02098345113771	-5.87735436964595	4.16875174554027e-09	8.59341487583832e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83406350169803	0
Merged-chr17-35215666-2	8.03027746426504	0.426971459548256	0.883969325672155	0.483016149031636	0.629084269829155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56106522053259	2.963110257001
Merged-chr1-34835820-3	5.52185229313546	0	1.30920159214425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96325700-8	20.6621015008389	0.589053989083241	0.443848115064751	1.32715217005553	0.184458350624893	0.961280946421062	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66872596779863	4.30266724022398
Merged-chr3-132756427-4	5.94263167255854	0	1.33059957819764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39463059-3	6.88669751293568	0	1.29858518198641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67524261-1	4.17288233969065	1.9486874486215	0.811310753066538	2.40190018591025	0.0163101581278799	0.15974274475786	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08776570511608	2.30492589888769
Merged-chr16-94713931-3	5.21535791474406	0	1.31517089516795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23846651-3	4.94526772610287	0	1.32929153000504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37778279-5	13.5928398708448	0.698999966696732	0.534655999687512	1.30738262940147	0.19108279380876	0.98575007848956	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55808342900894	3.07048935726883
Merged-chr18-62023328-2	2.89743754307069	0	1.43712805246578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120226633-2	6.10929992812839	2.21876845860386	0.89671945366057	2.47431730129914	0.0133491077988811	0.137545064368604	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	2.22299259577626
Merged-chr1-152606393-4	6.5324232879979	0	1.29941120656231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140818816-1	2.46649802362523	0	1.3385143294286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101981125-3	10.1235343789751	0.62589214589438	0.618938837423854	1.01123424165701	0.311904330721767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73153326829399	2.52024010234604
Merged-chr18-69537571-3	6.18696680707053	0	1.32055085667507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138835558-2	4.05812736734501	0	1.33365410308151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79522550-3	6.5923874860448	0	1.29754377897993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74774382-3	5.67134252693892	0	1.33859080067378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112283745-3	4.78401041945034	0	1.33428644117627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-89853004-5	13.9105045288968	0.747142111835663	0.516135600602105	1.44756941967203	0.147737508727813	0.820016584161017	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08031143194599	4.17701335725083
Merged-chr12-79137093-1	3.59225259732172	0	1.33917587812874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144381146-4	6.1799749444028	0	1.35245280107086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-81156882-2	4.99520545640563	1.8251446392523	1.05398594765952	1.73165936728589	0.0833342292309205	0.540716765298752	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	1.56795935138773
Merged-chr8-61397896-2	6.36943932624548	-0.351974557091265	0.709018891540048	-0.496424793882075	0.619594735710369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42528996796194	2.52352953733079
Merged-chr2-118601297-2	8.74817901798714	-0.582194477600003	0.72436924064062	-0.803726117753316	0.421555166932192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85275431141245	1.68884729081939
Merged-chr2-127113952-1	3.65151019478922	3.35634324276412	1.09391054711856	3.06820630956065	0.00215347888686335	0.0342971560665299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46981335012887
Merged-chr3-107994370-4	12.9811057847912	-0.600985136922987	0.519695875658738	-1.15641698360837	0.247510638021204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23484806156227	3.7266942667982
Merged-chr17-66221427-4	5.6487587100633	0	1.29382609258391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-98035084-2	7.11675612344058	-3.81028631286289	0.998306268810589	-3.8167508628415	0.000135220584706516	0.00402740397822788	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7232719571074	0.563523181795778
Merged-chr3-60580081-7	18.6222109075455	0.510058170712296	0.405942223391028	1.25647971884161	0.208942094581687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91545130031044	4.45942162894549
Merged-chr7-97748297-5	10.5823452650219	-2.86663769769909	0.733843422443836	-3.90633425336518	9.37068673460345e-05	0.0030060721421669	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09377708739567	1.20539659680455
Merged-chr6-136693520-6	24.0989414564065	-0.198217312646419	0.382096196837598	-0.518762851572342	0.603926126219593	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.37372811165543	5.08398951142807
Merged-chr9-35107377-4	6.77920679070415	0	1.29206932576572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75571164-2	4.67723549837705	0	1.32419988740929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56469005-2	3.38095956963584	0	1.39351439201649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164681811-2	6.21975298370788	0	1.41372995668121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82366978-2	5.0327085860101	-0.108320269458522	0.909787487895792	-0.119061067446698	0.905226974962103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32899154628534	1.15307255889252
Merged-chr2-27721247-2	4.75175525209553	0	1.37553986495827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21077939-4	18.7694863424834	-3.36262520758325	1.06296401786802	-3.16344217777722	0.00155915320499693	0.0267623917346281	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7769796719417	0.306240821987646
Merged-chr12-51811472-2	5.11659795861476	-1.16440414135174	1.08116359683146	-1.07699162713602	0.281484006287392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3762458884723	0.609949614787909
Merged-chr19-29824506-4	5.17165405247759	0	1.30619857918886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150405646-2	3.10772793580776	0	1.41051091350115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115991810-2	6.27040609434424	0	1.30598205378282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66230118-1	3.00851621423885	0	1.34562824330025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93701725-2	6.76612928375627	0.948501257175725	0.767677928351657	1.23554582220741	0.216627433810737	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31752018117671	1.94559955552748
Merged-chrX-56827674-1	3.5884183817886	0	1.36258198888337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72226421-1	4.64151322657506	0	1.31625877236346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22895818-4	4.59302091645784	0	1.32421359532743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108329908-2	3.61794968161455	0	1.3435759423264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34410962-2	6.17422225797149	-2.38824914523945	0.856320584546682	-2.78896617497959	0.00528765872547019	0.0680187120331819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81376708046154	1.21171060354126
Merged-chr12-102392170-2	5.32508842127026	0	1.34289202427573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93267627-2	6.0762817922189	-0.666412824817405	0.690276913690156	-0.965428238436695	0.334330363278907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8199029654574	2.315908400302
Merged-chr10-122562121-8	24.9387626956776	-1.59734187833579	0.402882288308679	-3.9647855581875	7.34619576704012e-05	0.00248421077933989	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45647718729725	3.69972867904386
Merged-chr18-26864988-4	5.35605324718357	0	1.34737500973294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107980135-1	3.08784183984731	-0.0727677217608775	1.04552012341409	-0.0695995420186256	0.944512401474537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0743140088861	0.581381506691384
Merged-chr5-90703046-3	6.29991389670892	0	1.33219186733847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100501461-3	5.23856625776173	0	1.33488650756423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68129879-3	5.70490888822474	0	1.31315742450572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119246661-4	5.29935657558395	0	1.32003134999624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183599427-2	6.31539011201413	1.66062717064389	0.815031448647105	2.03750072883741	0.0415998889791408	0.324699754566523	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80226583677036	3.38685339442914
Merged-chr8-68456821-2	4.94482150114284	0	1.35324721474469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10820351-4	7.38787628737444	0	1.29014443771624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58618669-2	3.8890867247543	0	1.3512383995702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45307882-2	5.83482365312181	0	1.32727528763722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123504504-3	4.91905514877415	0	1.33684776869394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157023312-3	11.4513072445434	2.23101664156195	0.751224869796386	2.96983863455778	0.00297956215259119	0.0441989447476128	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45550687955128	3.5798125855659
Merged-chr8-8441136-2	4.72127474021504	0	1.3251382669309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113607571-1	3.27260875662142	0	1.47625688935995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157409032-1	2.20446064475103	-4.67877104777162	1.42174202431533	-3.2908720202069	0.000998773409428838	0.0190002466412043	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05803886822826	0
Merged-chr5-5719480-1	2.71433491883318	0	1.42354986344457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98694239-5	10.9583451490646	1.65453887658055	0.434184937895721	3.81067773700137	0.000138586331264816	0.00409962082518365	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87399312813667	4.47305672676355
Merged-chr15-73034780-4	4.87950702867692	0	1.31524042470564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105245797-4	11.0080165610244	0.281684538014534	0.662974168790619	0.424880110379528	0.670924074550596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70737485463983	1.93177134892138
Merged-chr8-83783332-3	5.35099272280506	0	1.32600904262822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17393491-6	12.3651209492113	0.0368519063238873	0.559992471509999	0.0658078602816167	0.947530798204343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74955776847433	3.74581649988655
Merged-chr8-25067433-6	16.6640032576516	-1.56964601774203	0.646341913000509	-2.42850724387542	0.0151611222429569	0.150886185514509	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48847157846212	1.99834080004871
Merged-chr3-127802982-6	27.1683028692947	-1.6648470417441	0.349102127168347	-4.76893983788663	1.85197953045072e-06	0.000131400059062793	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.0432979596488	4.34067874525182
Merged-chr10-93306076-4	6.5069687919962	-1.7614817458623	0.884989337661221	-1.99039883408924	0.0465470182442862	0.351962676948753	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57297107127819	1.34389275758327
Merged-chr6-131354612-4	9.75425597571904	-0.179675631023656	0.693548779171267	-0.259067042462901	0.79558351319423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41524084724647	2.43884655774859
Merged-chr1-132311641-2	3.86405495077849	0	1.33711469092205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145890530-2	2.65086431191442	0	1.37115406224018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159142293-3	3.8551875111254	0	1.34212625339647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53167072-3	4.45148850069607	0	1.34062657056582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93195428-3	6.52271758800281	-0.980433081753471	0.712317881399624	-1.37639824487774	0.168698371075727	0.901149657182574	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83748986420256	1.5268023559189
Merged-chr11-51926408-3	5.84324208813065	0	1.31633878981275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67463944-6	16.0140490795783	0.43601920495446	0.420893395634535	1.03593738812917	0.300231353593061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77286463764401	3.96141885113292
Merged-chr2-102885547-4	5.32253598803339	0	1.30945382187013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41368296-8	17.0090334398267	-0.682888844434995	0.409923073901409	-1.66589511035731	0.0957343076986072	0.600139492601035	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6995212519863	4.08777970778512
Merged-chr11-99164662-3	8.45581088583352	0	1.31370990519732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166674853-1	3.20432330710504	0	1.32604366492883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21792141-3	4.76225522633505	0	1.30593689749039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17774979-2	4.52465793155971	0	1.31596016396828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72464554-2	4.47802559776194	0	1.31658203390684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116101429-2	5.25141890874534	2.39951974657373	0.984938885712383	2.43621181108939	0.0148419908371505	0.148367058906536	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.96027510505613
Merged-chr16-29527279-4	6.59506254223828	0	1.29072620750978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64181469-3	4.1325532850985	0	1.33270177210583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88958965-2	7.64041122974294	1.56679717710098	0.872735336604216	1.79527184403617	0.0726103987224702	0.489053712112816	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21066910011236	2.22281280114811
Merged-chr1-65230745-4	4.77115359253379	0	1.34774511757524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129588197-6	11.5698984768492	-0.0741649537958614	0.510823132613247	-0.14518714807697	0.8845631127659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95238860495259	3.8786848168214
Merged-chr12-119426380-2	2.87976328170469	0	1.41511537055784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116583272-3	6.80958785704998	1.04709028888841	0.679617354133098	1.54070563754814	0.123388444127356	0.723467756598685	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73465849967622	2.72712188292622
Merged-chr19-29825185-1	1.50482039824484	0	1.58861545433321	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35735200-1	6.63561381298419	1.81528603521705	0.962228103066075	1.88654439569241	0.0592216317101622	0.419728497367924	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21241082042818	4.47749393764168
Merged-chr5-21384761-3	3.40269290088769	0	1.35498061876772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82030518-1	2.62002958477412	0	1.37229399172173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80375407-1	2.03704331120694	0	1.46953988348053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11012655-2	2.47619149142947	0	1.42448270705547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129302736-1	3.73726020956955	1.42506512595643	1.13315953649091	1.25760325891045	0.208535274193737	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	1.27663763006505
Merged-chr16-39053157-2	7.33407319512663	0.55284842104538	0.690588843378072	0.800546412451549	0.423394284223156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69040478911062	3.78520874971223
Merged-chr19-3378382-1	4.84328124924127	0	1.30380468668033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86598857-2	3.77878319307303	0	1.38169399406252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161556886-1	1.81142121016525	0	1.38138843446818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78895586-2	5.3648487875294	3.47200394555053	1.12822399361887	3.07740658343365	0.00208810275575981	0.0334598240995293	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.961728545204858
Merged-chr8-125376229-1	3.121857606552	-1.5284117747727	1.08807822651136	-1.40468923789896	0.160113707395774	0.86856967653032	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80653534930288	0.581381506691384
Merged-chr1-191177883-1	2.34392541263556	0	1.37863473026262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69080488-1	3.23437265486554	1.29683636087365	1.34613907149275	0.963374727275076	0.335359504424129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr10-95138973-2	3.00961205503904	0	1.43346329682964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164078165-2	5.39714093105174	0	1.33883981647288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166442229-3	4.13594458069507	0	1.32759710408675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47370900-1	1.77615800004655	0	1.45297145761817	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118119807-1	1.77841445003263	0	1.41719639093857	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173477666-2	14.3391381019785	-0.111656815968845	0.841804901748597	-0.132639778809688	0.8944782714115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78719799473084	0.843323834477631
Merged-chr1-91010820-1	1.91050322093884	0	1.47928794042322	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77834817-1	1.86128245783917	0	1.40022404400614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47426907-3	7.9501137449723	-5.20254493800585	1.07980546088049	-4.8180391065661	1.44975960104628e-06	0.000109017250736445	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64009003446862	0
Merged-chr14-54902345-3	10.0080397222604	0.451728274277189	0.715944503942404	0.630954315299177	0.528070395972058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44397286786283	1.84022605426951
Merged-chr2-104105441-4	11.9040539359178	-0.0646562693129586	0.380789125887436	-0.169795471869833	0.865170988144788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11961378268451	4.06158527057453
Merged-chr17-17839498-5	10.1636468783405	-1.46292470456123	0.515520073125852	-2.83776477546412	0.00454306491751054	0.0604105020200928	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02966675944843	2.22686136056015
Merged-chr1-173491248-3	13.9535371029835	-0.619866979741812	0.95169161742147	-0.651331763771641	0.514832348317096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68469090811695	0.73596151290311
Merged-chr11-43451493-3	4.77959377055343	0	1.31926294081349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27725171-2	4.41444987044711	0	1.3310541660507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52098560-4	5.47247952986358	0	1.30966772741943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38760861-3	7.46047380694402	0	1.30503766646555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134987718-2	4.50579159403318	0	1.33546245029971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-114622727-2	3.73888720907207	0	1.3202585096542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103375700-3	4.14272917062858	0	1.3381400405101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26380861-1	2.9681901094116	0	1.34068909186475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67416021-3	5.37051805878059	0	1.34667309605354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28065673-3	7.15480261479977	1.19455772253007	0.741521970690922	1.61095391606134	0.107189767192118	0.654007705596279	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29426787717726	1.68089718199588
Merged-chr6-33980974-5	11.0651532409818	0	1.29526119137259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172451252-6	19.0427488987473	0.957026925338239	0.409535211213181	2.3368611517022	0.0194464049002899	0.183382470281169	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8093699567782	3.89507289297894
Merged-chr4-83274352-3	5.63805199424805	2.3335784721929	1.14816351052833	2.0324443781697	0.0421086892970871	0.327770626659613	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.11812572528152
Merged-chr14-62342854-1	5.21296375816703	-0.122325445113285	0.900778106138114	-0.135799753879152	0.891979585635354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36940494329983	1.45391938817053
Merged-chr15-101247003-5	15.548018367109	0.4964851780541	0.484192041231403	1.02538896920204	0.305179690917279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90703365772713	3.40619412439842
Merged-chr8-95302592-4	11.4669891142965	0.257905007795904	0.629858391049255	0.409465066213171	0.682198398368327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94186501220615	3.51028952381843
Merged-chr12-80327101-3	6.8960995950249	0	1.3081569512804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108696059-3	6.57106801748642	0	1.31381149299647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140767840-4	7.22505401120673	0	1.29545938483882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66128880-4	5.80328806845	0	1.30361958663051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-12184585-2	4.35251751737944	0	1.39052713323282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83086092-3	4.9805547227575	0	1.32569849619831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21039529-4	5.25002454967339	0	1.31185335524597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22923638-3	10.5319290438782	1.69328288014243	0.821554755882694	2.06107124086104	0.0392962440363636	0.312466824385522	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.727571417065705	2.04828035860944
Merged-chr6-50075462-1	6.78739600748485	2.01430042865232	0.699252664270409	2.88064748491737	0.00396859229994086	0.0547344095466305	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65695595365876	3.96183740706295
Merged-chr4-72168680-1	1.57102707227378	0	1.44884526228502	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99438019-1	4.00207669179721	1.01003003976409	0.917269413035781	1.10112691583306	0.270841424060699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51391391094517	2.05402110133586
Merged-chr6-142708638-4	5.67115102261739	0	1.30993892377654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33566326-6	12.5118181157229	0.109643580177993	0.523812491752511	0.209318376144792	0.834199707417086	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46145021436912	2.8319800814966
Merged-chr7-64409041-2	5.24262438212553	2.85349847595061	1.10170534364612	2.59007409958355	0.00959552748712751	0.107552202259663	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.97634481356229
Merged-chr1-88262432-4	8.53944733690628	0	1.30201458725124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52089590-4	5.70249397498675	0	1.32741078044641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38761471-4	5.01051452569879	0	1.30248469220647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124066709-3	5.7554571772144	-1.7941703296238	0.829342459914817	-2.16336485389652	0.0305131285525703	0.26003011194526	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71851151868908	0.926147595614233
Merged-chr2-101778617-2	8.9528502973275	-0.930691875511568	0.613616977979858	-1.51673097210507	0.129334621199624	0.747391241325665	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03553748992101	2.57374258684139
Merged-chr2-93199069-3	5.04370246834511	0	1.30601305783225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75731804-5	28.2737557455866	0.51512089237451	0.369404497988823	1.39446296723245	0.163177844986765	0.879496821057833	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71380004060953	4.16432879026862
Merged-chr3-20005795-4	5.47433205121735	0	1.31000935416508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24040833-3	10.7714127225004	-1.12291814149465	0.702392889870014	-1.59870374214987	0.1098864457358	0.66610757727751	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99965114412694	1.45795114796949
Merged-chr1-23202833-3	6.68209283965977	0	1.31953473017881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40762300-8	27.7148892488338	1.09373698131279	0.320506285142444	3.4125289643749	0.000643630867546389	0.0133987584169119	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92526767942111	6.03312431562861
Merged-chr10-119079475-4	5.23732894635621	0	1.30733424331793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170967709-4	6.50040703023691	0	1.30128464111559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65480633-3	6.94802505775211	0	1.31079662196623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95873582-2	5.75815183559785	-1.67036373152163	0.720960197057832	-2.31685984654661	0.0205113676945433	0.190958232421659	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54554131042056	1.87744667331019
Merged-chr14-103011948-4	6.71191615952246	0	1.29982042434746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44372369-3	7.86638161508453	-4.66997782834382	1.03993048449191	-4.4906634606692	7.10016610034535e-06	0.000384397227831953	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17242376700287	0.382164212378408
Merged-chr16-23181775-2	3.5496722685683	0	1.33943902719174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113402876-2	10.8456044857039	0.0817609995219636	0.584607968756453	0.139856115365449	0.888773675283534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97726721803284	2.9868467483527
Merged-chr15-63494746-2	5.64278039572743	0.130810303151863	0.660334486885991	0.198097033775623	0.842969145552125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98722628300272	2.63732062367281
Merged-chr7-80883194-4	8.28331008255743	0	1.29641546736214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182928064-2	3.30256102607071	0	1.36052254919862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112273672-2	3.78392540028489	0	1.39009624674798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31397919-2	4.29136044900766	0	1.35819715399133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55392513-1	2.65779517230536	0	1.33407266995089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118606845-2	3.16473454448655	0	1.34822109938525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136462853-9	20.2634486164924	0.437502077591498	0.4125364025618	1.06051750796939	0.28890922920618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73214998528373	4.18031570894871
Merged-chr5-122303537-4	7.862124127705	-0.00269612775241259	0.676326594260199	-0.00398642870958188	0.996819298504299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03079958924498	1.99834080004871
Merged-chr14-65071026-2	4.48878055506203	0	1.33424299446403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58630634-2	3.87536697890336	0	1.35814777260112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180344953-2	3.40016742852278	0	1.32722913160904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93839257-2	3.35063113739249	0	1.41608160983968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119331562-2	3.28215717803551	0	1.36199885586881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-84348065-4	11.8307910321635	-1.04371318450928	0.713284669293938	-1.46324914783662	0.143399216873237	0.802549265655921	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68930851446321	1.84231959469675
Merged-chr4-8863918-2	3.34054619353184	-0.22056879496794	1.31180198694549	-0.16814183631596	0.866471697227081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	0.306240821987646
Merged-chr2-173356197-1	2.50594695864324	0	1.37537959910658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-24499684-5	10.6188642831211	0	1.29227876106064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8370492-2	4.21923073714379	1.34115930500769	1.3362343065939	1.00368572965795	0.315530117580301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.469435083901436
Merged-chr16-13863619-2	3.1972291394973	0	1.33801518168592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122292652-3	5.21742632104621	0	1.32039899503989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-98350776-4	9.62413981753703	0.425409674039996	0.491418053910531	0.865677747601531	0.386666906300114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80431014751344	4.13514734354975
Merged-chr6-135183110-3	10.3961941380397	-0.137212453886254	0.563103060624679	-0.243672008697728	0.807484853821385	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85342832940548	2.78618705426277
Merged-chr19-25622708-2	4.27329186740592	0	1.34858593591247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50565330-2	4.88520099697823	0	1.31235121348223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103419835-3	8.64949140966906	2.22498053504511	0.735096190649429	3.02678828070028	0.00247167011073201	0.0382371579204294	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29669522411066	2.4873954172117
Merged-chr13-105316208-3	5.92907906503204	0	1.32068777426229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114193849-2	4.37200849205699	0	1.31843645994999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117362160-4	5.10500389474895	0	1.30817943077339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60974125-4	10.8550748421816	2.65557163451232	0.814228019244921	3.26145940909155	0.00110840300459395	0.0205590981374386	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	2.37816961274976
Merged-chr7-142982037-2	3.76165207861183	0	1.32898900580323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124663189-4	5.16829555372222	0	1.31650804931637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123005250-3	3.95483132437691	0	1.35480462136768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38581308-1	4.01581652772903	0	1.34354859316857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71867592-3	4.70688854434858	0	1.3354608824707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97867005-3	4.92788736250796	0	1.31650130115546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89299604-3	5.86033312289111	0	1.30580733307715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78164123-3	5.39128248839539	0	1.32331809332224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22693331-1	5.71957385730796	-0.448740936926463	0.972843930826101	-0.461267139268074	0.644606957805769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75953057640824	1.03956264035389
Merged-chr1-154112653-1	2.3700757617616	0	1.3805392012581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44952155-3	6.43384906234738	0	1.30954946643708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4569309-3	8.75423478422059	0	1.32526188800212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81210739-3	8.66420385363653	1.50460904396523	0.634038656635003	2.37305569340291	0.017641603619918	0.170005637833234	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70453766396681	3.88949676251831
Merged-chr10-19687934-4	7.94825633037155	2.51538727338524	1.0773158459096	2.33486519569518	0.0195504640432699	0.184163849412068	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.21171060354126
Merged-chr1-54896854-3	8.64905328896753	0	1.29776107492248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79511760-3	5.29329998985698	0	1.31507541171965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106394580-3	6.02185288693282	0	1.32713960718811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75740788-6	16.9491352173478	0.249652469934818	0.418108202210983	0.597100149230844	0.550440518283837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13696397682595	4.38045511992341
Merged-chr16-30790230-4	7.14606151253579	0	1.32125759858091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50124917-3	9.71102344960046	-2.68264523610504	0.736422799329924	-3.64280578839493	0.000269682312851925	0.00685173422069281	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18806480289538	1.31734301959449
Merged-chr8-75103417-4	11.3951959670026	-1.7399491913171	0.925468891174696	-1.88007312607622	0.0600981124642177	0.424283843678346	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20388872979942	0.733321818366247
Merged-chr10-17175616-2	4.73184713332597	-1.82713673034213	0.872196758742497	-2.09486759957287	0.0361827637961233	0.293736076521072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4422204414323	1.34805514843284
Merged-chr2-90547520-4	9.19299638177413	0	1.3068387387254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118664737-4	6.84453038484911	0.646240882573784	0.908918841214762	0.710999545030982	0.477084517739622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16377859829028	1.15307255889252
Merged-chr1-161479927-4	10.2998337067789	-0.512319701651095	0.519165756855848	-0.986813353703808	0.323734147075213	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7118269332321	2.88338859082526
Merged-chr6-29825496-4	6.73923964150724	0	1.29363486204808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34220922-3	7.61170461647485	0	1.29856836336469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52573711-4	6.21561898044248	0	1.30172629191569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12222180-4	9.91738571419039	0.262651683727769	0.580594356530221	0.452384148715193	0.65099226426739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47332827154867	3.83397206789463
Merged-chr11-70306265-4	5.6776411625148	0	1.30380985866576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79224853-4	9.50592543904905	0.197166025983131	0.711911756327248	0.276952900736336	0.781816271732514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.353449604192	2.42614148764585
Merged-chr17-17862513-5	24.0420971958772	-0.762433293077585	0.351584930823148	-2.16856078357095	0.030116045215036	0.257418324476356	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.67624540229008	4.94410106773797
Merged-chr18-38186040-4	6.53916297193596	0	1.29928005780241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76312481-1	2.72440947768289	0	1.33667879407095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64318602-2	4.40273556521611	0	1.31469322810997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121427224-6	17.2819130734385	1.78998316660696	0.568772790585422	3.14709704162287	0.00164900223627498	0.0279232184844843	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91251612742902	3.49885743234506
Merged-chr11-58108026-1	5.08922460484029	1.09183747293445	0.806792021862265	1.35330722583775	0.175957501726017	0.929196295233017	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55136416109049	1.74879361603124
Merged-chr9-108443528-4	6.32614555929946	0	1.29854122276659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80171517-4	8.70870208025636	0.0322746579022381	0.705871194053376	0.0457231548392065	0.963530908214199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18539668257283	3.12819815355747
Merged-chr10-84615714-2	7.659293250079	0.496492405104681	0.639085733536141	0.776879187018503	0.437230051687765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25692353884117	2.43299288952747
Merged-chr18-64954217-7	17.5702604528531	0.3442931957742	0.383938712812354	0.896739985536362	0.369857678716603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14587877784199	4.57620446094807
Merged-chr2-168469199-5	15.584030390015	-0.0552863369550728	0.39675812190306	-0.139345192708067	0.889177379587346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.9791981286922	4.78054923572185
Merged-chr6-100675127-3	6.90208195173625	0	1.2924569989502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60662632-4	19.5923514274486	0.774416356001874	0.362680371067561	2.13525853004494	0.0327398983224879	0.274003764828547	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32166509646897	5.13218060820596
Merged-chr15-97422392-4	6.73230247435782	0	1.30255965521706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17843472-4	5.53082105114784	0	1.32136567312678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19958017-4	6.75440022574752	0	1.33212642315658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10879677-4	5.20561539127991	0	1.31189545543193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60542518-3	9.38717332885772	0.525853869882095	0.527602403503127	0.99668588768849	0.318917001819191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40999470839343	3.15436071963416
Merged-chr3-87500341-9	22.6543603868426	-0.0949067919485929	0.349153588104794	-0.271819609426749	0.785760726585227	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86889609980752	4.59430876261167
Merged-chr11-111523633-2	5.30928289382658	0.596793686712482	0.685435685200276	0.870677876273841	0.383930061618406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11925800127764	3.27601710700355
Merged-chr11-70038625-1	2.20289529657814	0	1.40621454038108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67203546-1	2.20707526909416	-3.60391460938869	1.34651577194396	-2.67647411525358	0.00744013126481347	0.0880103874404658	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1337799066896	0
Merged-chr4-109564987-1	2.38981597154756	0	1.37223609998446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117361666-1	2.58199423347112	0	1.36195466016027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35138233-1	1.31245797269472	0	1.60543061337685	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-41153222-1	1.38520654022168	-1.84207677878878	1.47303540992179	-1.25053122713906	0.211105555456393	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33908913862105	0.805218875278971
Merged-chr2-154594100-2	2.56408437087924	0	1.42208561590478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114872953-1	1.91782733759573	0	1.41825699183291	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55698247-1	3.53078172596576	0	1.3441522477715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63633694-2	3.08858003533554	0	1.41707469633556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4787211-1	1.97143344781176	0	1.51729693915468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118019166-2	2.15809240616878	0	2.21379553502758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58012315-1	2.5442376512518	0	1.38358835264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137510339-4	10.0081996026584	0	1.29684290256824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108828037-1	7.7190030823925	0.110598961266025	0.532296035828838	0.207777165001448	0.835402963194177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70497814601789	3.08356405418095
Merged-chr11-54427774-1	2.17043899175656	0	1.38217644624691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-96116298-1	2.23193764805401	0	1.35004029036093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40454644-1	1.91232675236496	0	1.39790672607086	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140841164-1	2.0016667805892	0	1.71415286397354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76702539-2	9.14325404701508	-0.269428580058178	0.801790423373405	-0.336033671897203	0.736845474868689	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58272358373783	3.04845038512503
Merged-chr17-8232302-1	2.87468260703763	0	1.36449097582777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77445157-2	8.81785156718087	0	1.31296240600789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115502006-1	7.58779985293765	2.27057850151456	0.772580035735605	2.93895570230811	0.00329320138438621	0.0475679791476793	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4237088716002	4.68108943348294
Merged-chr9-99339464-1	3.42684745710918	-2.47203644046302	1.22590510345745	-2.0164990205939	0.0437478205322109	0.337361320641733	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9234456491322	0.469435083901436
Merged-chr4-9246573-1	3.0929525901037	0	1.39252621290859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23034931-1	1.44415643498206	0	1.57761795575493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108458862-1	2.59619961780922	0	1.34581934570293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169089282-1	1.68073980945194	0	1.37682223402562	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-49051038-2	2.6100383458263	0	1.44383766815616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79493057-1	1.90107474566408	0	1.43563823954718	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43766511-1	1.07425839813589	0	2.43037198931188	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9655150-1	1.78180423897571	0	1.44470342322941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85272146-1	3.57821785626111	-1.78028439789116	0.980542251992482	-1.81561212102139	0.0694298929536067	0.472403767695375	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86355747798951	0.989878296978726
Merged-chr4-40018372-1	1.63819965070637	0	1.48336208474103	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81149993-1	1.72598740421201	0	1.47449223684564	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51835334-1	2.23865355688634	0	1.37995991052702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139616359-2	5.81638942526516	-1.64446949553019	1.05088173099404	-1.56484735344545	0.117618705474273	0.70010212271503	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89550006347635	0.469435083901436
Merged-chr10-24191593-1	1.41893330478955	0	1.5413181126302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57714452-4	3.92742626509518	0	1.33543537551098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46607010-2	8.53058074427845	0.422191662040496	0.738791129895831	0.5714628194034	0.567685956713316	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55871788117019	2.37544986530815
Merged-chr5-108634220-1	2.48117147349251	0	1.36599132224124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93967726-1	2.7032894442371	0	1.40422697100036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72697518-4	5.46151898530788	0	1.29612712218276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70194116-1	2.61419697592487	1.40374435249454	1.2668853539013	1.10802792705101	0.26784975514253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0.735627456805112
Merged-chr11-8718268-1	1.75906866806659	2.50285336224445	1.49473252979628	1.67444898157503	0.094042393202308	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr8-40321251-3	12.7330448396674	1.47523496197363	0.45424322198632	3.24767633410733	0.00116351543156846	0.0213450531699249	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46882577054481	4.05217014368676
Merged-chr7-120901866-3	6.11406217650397	0	1.32405967283292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43378411-4	5.38695284596959	0	1.30437145422629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95779990-3	8.58469097214349	3.77852614693121	1.05121159477111	3.59444869684295	0.000325079190677586	0.0079560392486957	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.8131505516485
Merged-chr7-78864633-4	6.62097265454668	0	1.29961671685848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-26689915-4	7.49938690406017	0	1.30148408475087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123941080-2	5.99348174028293	2.04001365434713	0.851652690281499	2.39535866865264	0.0166041140913413	0.162063097746495	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	2.25795226179178
Merged-chr5-105822715-3	8.436832125907	-2.64995611737743	0.869552705295167	-3.04749338509379	0.00230758604968622	0.0362131407307387	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12873517827871	0.963545719069792
Merged-chr19-34444992-3	5.94405026963737	0	1.32340828467663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-86020486-3	10.5823720551163	0.482461866180967	0.580871309896205	0.830583053356821	0.406209211493445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88327342151921	4.89236216513096
Merged-chrX-106135725-3	8.50759775461443	2.01228727905579	0.513495451095397	3.91880254199554	8.89899787702213e-05	0.00288306353630088	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09899123027805	4.06334161291824
Merged-chr1-64485515-2	3.46204464804666	0	1.380717268519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52949483-2	2.51431041722398	0	1.39031274231173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9865874-3	4.86087718437636	0	1.29601206520632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90740837-4	6.11387334553904	0	1.32382776551861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43469709-6	14.715740753744	0.233221561429857	0.533102677472042	0.437479628757047	0.661763546615395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23210518020395	3.75578428719024
Merged-chr19-9071643-4	6.56999846631108	0	1.29972117798214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146422002-8	20.0919301759415	-0.997023384583999	0.448228778857705	-2.22436271746066	0.0261240501388248	0.230065326383277	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97867314524214	3.32652681610041
Merged-chr11-31852117-1	4.55488019095698	0.944474795160275	0.982712095685547	0.961090027594911	0.336506903424362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.775671219155393	1.20275690226768
Merged-chr15-74929033-6	24.0488713981442	-0.281001370209298	0.325108909869961	-0.864329957372422	0.387406657903587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73613122624583	4.34063447954243
Merged-chr1-91099110-4	8.18443609661681	-0.153180965916292	0.746423566534834	-0.205219894955103	0.837400326305676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53002508911274	1.46928333126936
Merged-chr12-91676129-4	7.60967268610715	0	1.28524575860637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59836295-4	14.0048660358988	1.48632709899747	0.402686308376775	3.69102963790559	0.000223348108284463	0.00594799052912846	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03211280666709	4.62495482701239
Merged-chr9-89220975-4	8.20213500482727	0	1.31409018113112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117808301-4	5.29404733376762	0	1.32206048358344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53485444-2	3.90650752844166	0	1.35379987072983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79499514-3	4.76899342883033	0	1.31515850313184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30784391-3	11.1033982880707	0	1.3046825117887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59169922-2	7.80265242657214	0.437217246962281	0.481432897967266	0.908158226843918	0.363794630765743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59334775590823	3.9197993999415
Merged-chr11-100611840-4	6.13162312231671	0	1.30236054577647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116943374-4	8.16409410290218	0	1.2948246377962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29807571-4	4.40360677947025	0	1.31571462213355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48267756-4	6.6776672943765	0	1.32022313933577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72350426-1	5.1511078389626	0	1.31109521190304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93521514-3	8.15144454667542	-0.615342176830225	0.653590340396845	-0.941479913024117	0.346458978297609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03833957152721	3.26132114800432
Merged-chr16-94517808-3	5.3510878432954	0	1.30686581846414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39603518-3	4.0746776217313	0	1.32452851793315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118737365-2	3.97156096653685	0	1.37019365944851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51818429-2	5.59463408891657	0	1.30052149052676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102338014-3	5.89824146090785	0	1.32499549171007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74710297-4	13.9009648367949	-2.54114618536811	0.432623329076375	-5.87380757018655	4.25897722137349e-09	8.697097672121e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.65222941041183	3.17013828566755
Merged-chr1-172000827-4	4.87306249323806	1.30093301860989	1.314011685951	0.990046764818804	0.322151261809831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr11-51935258-3	5.71760101503477	0	1.32347306500959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117221080-2	4.16640541618177	0	1.4415306414355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88239481-1	3.78341837097926	0	1.34804623252832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32087819-3	16.8059478089497	0.234179627898388	0.55793769443907	0.419723618304411	0.674687369246501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.24964592585699	5.3893332151078
Merged-chr16-36724358-2	3.92989985587625	0	1.31842779552696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67872006-2	8.00053893174722	-2.32473902759804	0.680152656629765	-3.41796654756505	0.000630908608473278	0.0131843152955852	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77252374634817	1.72791372237238
Merged-chr18-34119201-3	4.85566998163558	0	1.31326560967363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65561267-4	9.18291695949691	0	1.3078325077997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-27280181-2	2.67682773404082	0	1.414230341157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113859136-1	4.36703114338263	2.33263884344946	1.06138446301242	2.19773223062732	0.027968193310711	0.242774914994915	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	1.11051826775391
Merged-chr11-77624575-2	2.67193607749106	0	1.35048221405404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100004824-4	5.3046993714994	0	1.30296431896719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64867066-2	3.87887231170493	0	1.31316613573994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12424375-2	3.43437373445981	0	1.33467305830013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54246120-2	2.57026986597766	0	1.50354576473127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109550777-1	3.52542973948423	0	1.31396535596501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125483604-2	3.71071717350865	-1.8039135257777	1.27400391023158	-1.41594033683131	0.156792973635269	0.855530799220529	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00094035035971	0
Merged-chrX-163301599-2	2.28380884263791	0	1.40198573678479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58034731-4	7.25221802612385	-2.01294536709268	1.10288387892207	-1.82516528309407	0.0679760910327415	0.465322191978371	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75533793041851	0.306240821987646
Merged-chr15-88828865-4	5.79920582379519	0	1.31314290650797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4158404-2	3.70164546083038	0	1.3189488532229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70847825-2	1.96691268333339	0	1.58967067201207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5508058-4	9.7990405526047	0	1.35125906085967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43177614-3	16.6426083343549	-1.65782739289958	0.433230339160196	-3.82666503946428	0.000129891073494478	0.00389888015092795	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.12949590496199	4.39205735087858
Merged-chr12-103325658-3	5.81881878537952	0	1.30609449991556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40730876-4	11.4783358613863	0.617611782805761	0.622426672172956	0.992264326735252	0.321068600330533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49212279514902	3.20824388900399
Merged-chr14-63409385-4	5.18378162785491	0	1.32028879336678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113669891-5	9.7502905087684	0	1.29458230212597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96266419-4	7.7707139761577	0	1.29824170253266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34885045-4	8.72444550969351	0	1.29801661003394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74773436-4	8.09881061683966	0	1.2974478793133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88876502-4	5.620346186684	0	1.32052548830031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45436923-2	6.01980426000724	-0.309221009863729	0.681835020900932	-0.453512947245134	0.65017942246158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1202502129229	2.44575596919856
Merged-chrX-21690975-2	3.26370299246368	0	1.3620655844636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40564436-4	6.36677166345195	0	1.29501824934581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114706471-4	4.64441585079463	0	1.33005860149758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117718967-1	3.18927756260724	0	1.36552913988773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65990762-3	11.1429156777008	1.50904488931417	0.508827918266937	2.9657273807891	0.00301968032744718	0.0445426705817976	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22616630430364	4.08932793089114
Merged-chrX-167302210-1	4.32197392505283	-0.249454025450419	0.936831076144707	-0.266274285516856	0.790027975608273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45657482526684	1.03956264035389
Merged-chr7-114530696-3	4.75040914166055	0	1.31503759351627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68257538-3	6.72603275029118	-1.34146593615368	0.723441373702232	-1.85428423769667	0.0636985059622803	0.443429977580682	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25186022097402	1.43116362910629
Merged-chr11-90220276-7	13.519725794951	1.09417801138859	0.479187682731203	2.28340178769237	0.0224067120636342	0.204896306536558	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77321239770403	2.92789308290527
Merged-chr5-102052998-4	13.1722088459389	0	1.28266072616485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11903622-2	4.7425646245038	0	1.35426959895086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12006357-2	5.46920346866368	0	1.29988650457687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11001368-3	5.40447147656143	0	1.2969533869047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136988704-5	12.649121660465	-0.949877087841531	0.764450614183855	-1.24256174331895	0.214029374836697	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53101878646637	1.35700371934843
Merged-chr13-52962597-3	6.57793003451841	-1.70942456165796	1.000492125744	-1.70858372362178	0.0875280857230586	0.56025176703487	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90669564743718	0.61242769162773
Merged-chr18-63653547-2	4.55608213092673	0	1.30978245665869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161594844-8	22.0050775592675	0.380005168868349	0.368471415982108	1.03130162174317	0.302399398075303	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69170816764349	4.9870057561866
Merged-chr4-40251140-4	7.02377430786824	0	1.29829852583643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3820801-4	4.99157924638694	0	1.31296340336596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25556422-3	5.35058060550943	0	1.2987723279854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12047254-2	3.60972011162196	0	1.39398665840402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119167807-2	8.43692261645217	0.688461737472632	0.699786750167625	0.983816480245903	0.325205754748025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25683179373323	2.91665652935043
Merged-chr4-47312841-3	5.60423733845486	0	1.30646500754931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69063610-4	7.30126346630338	0	1.30710845831513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24193028-4	13.5895896585575	-0.396128832905061	0.696530925927472	-0.568716790826756	0.569548351084607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5234450738158	1.85073157931653
Merged-chr12-102461429-8	28.6794923808099	-0.128967400970334	0.406609276851031	-0.317177714116897	0.751108759117654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.48850232166208	5.25581771228791
Merged-chr7-122396150-1	2.2774456395332	0	1.350820695977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80038254-2	3.6467192339105	0	1.35740850246808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135586949-1	3.89530446682643	0.451270341739368	1.14701564987061	0.393429977864969	0.694001931998625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90313952612728	1.41695929335733
Merged-chr2-156869199-1	2.0977592305211	0	1.45027305893353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118702771-1	3.67045023750418	-1.12163420706979	0.925700321562421	-1.21166016792202	0.225642492447322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83627487840634	1.26637849737819
Merged-chr13-107885183-1	2.62826212478572	0	1.3357944682523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83739873-1	3.32660836155647	0	1.34719957710981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3699934-1	2.28892971290186	0	1.45143720934761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43754101-2	5.67892577876045	0.605698857331129	0.812004376680156	0.745930532797744	0.45570937984273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13287828543225	2.70922859466063
Merged-chr8-128652444-1	2.38183756988249	0	1.33508411791468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73449276-2	4.01518084591288	0	1.35349824439295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176074732-1	1.79560780181484	0	1.42385806997275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36471655-1	1.76571988423354	0	1.41099186927698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59006332-1	3.74220638953666	-1.14797646523036	0.941430375351035	-1.21939603319291	0.222693914806208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16447383760598	1.15307255889252
Merged-chr4-53210875-1	1.94018034322188	0	1.41962676479796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-54115098-1	2.83014462995394	0	1.367307334909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40502808-1	2.21804404425593	0	1.34848120811873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-61994081-1	2.06603323162202	0	1.34607240345597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67123930-2	4.82075827660177	0	1.30823536353834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133624609-1	4.19747698627784	1.80503754827864	0.991517318034899	1.82048010200776	0.0686859237507055	0.468806180636474	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76561596842564	2.86672829431885
Merged-chr1-55520983-2	4.66638212658283	-1.53099399265688	0.929574527748581	-1.64698358975576	0.0995614189043279	0.618621208522273	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19157184707231	1.37038362634479
Merged-chr8-26239875-4	6.15982074857435	0	1.31462593122686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84224628-1	3.76826078842624	2.89118883256065	0.887926307821793	3.25611349398256	0.00112948593128015	0.0208554359043326	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35748071721513	3.56584984784169
Merged-chr10-70183366-1	2.46925892677217	0	1.3526230009241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119517984-1	4.17193953194585	2.68248403061357	1.22609559271435	2.187826174854	0.0286822664875955	0.247461233944866	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.991483092781915	3.39678931361802
Merged-chr13-8709271-2	4.83035037792846	0	1.3287565978718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38940715-1	2.40113681839395	0	1.37999762452547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154090042-2	3.93379941670675	0	1.31901847565695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43474504-1	2.96829699885371	3.33314441757017	1.19473797313444	2.78985391987294	0.00527318276922481	0.0679245813597013	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.58458601743443
Merged-chr18-36483367-1	1.7678986921318	0	1.50876175690496	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116163752-1	1.61746331070822	0	1.53121140192128	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146432724-1	2.73734626416615	-2.6729634732163	1.20717875467884	-2.21422342205437	0.0268134134158973	0.234841082036621	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70076467523441	0
Merged-chr8-8973557-2	2.33662750948698	0	1.39233635218883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98998150-3	3.83768128939572	0	1.30883758162835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193931527-1	4.89627770352293	2.24926380313072	1.07347785862384	2.09530525949943	0.0361438652340128	0.293617232419418	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	1.87496859647037
Merged-chr12-52002393-2	2.72098211208348	2.51256379496272	1.33831504395168	1.87740831750931	0.060462152389949	0.426117322052805	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr1-105863166-2	4.63786880876354	0	1.33063940021022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5296188-1	1.77638099467073	0	1.42324046769587	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30843213-2	2.57250254100509	0	1.4223207322604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152922123-2	5.43792216338945	0	1.31814824954281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4983426-1	2.15855517209418	0	1.41965611577374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99428470-4	7.83359750266963	0	1.29313901767011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-98401597-1	1.69956286578133	0	1.48695829861643	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69179895-1	2.12678434826213	0	1.38119070797956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37998338-1	5.75731939535327	-0.677596600479929	0.738902979350692	-0.917030543137563	0.359126635298163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81597578037966	1.5122114716189
Merged-chr2-129544822-6	19.0438376878549	-0.711996724845918	0.470336299337861	-1.51380347604101	0.130075690749954	0.750412826674893	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.20415671513866	4.08359686155196
Merged-chrX-107143393-3	5.60962380405821	0	1.30164198549284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147871638-3	7.28126605891229	0	1.31794247543589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-130937044-2	6.11638579857294	0.794135929829636	0.522885088808181	1.51875803465676	0.128823412619615	0.745359900924503	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70617882176546	3.27979766758479
Merged-chr6-146825151-3	9.26356638605352	-0.376856324174793	0.533414974666697	-0.706497458962921	0.479878832380503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78778477028467	3.55156493172897
Merged-chr18-67490956-4	11.5882400020823	-2.69882637446113	0.89985621196912	-2.99917513327535	0.00270711648482057	0.0410343850190409	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91092770583125	0.581381506691384
Merged-chr4-133650216-4	11.7883083762228	1.33955498826618	0.458065978964679	2.92437126916487	0.00345152807715664	0.0492238222893666	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66945223321229	3.86563237271276
Merged-chr4-150508889-3	6.12290811846762	0	1.30711384815583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31507575-2	5.80349817991597	-1.65364092324574	0.79011936040255	-2.09290014410385	0.0363580693906777	0.294661342230339	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38908921686806	1.41926493179619
Merged-chr5-105393570-2	3.980845541657	0	1.38208650050082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12873855-3	5.36143761247334	0	1.30934793213559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38074323-2	4.20143343552881	0	1.33952446854827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113751334-2	3.79793754024664	0	1.36721954100705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110014473-2	3.29499329550136	0	1.36886179146305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95670049-2	3.70138706707076	0	1.32385923123869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100083855-2	4.832165463281	0	1.32423327118485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84853086-1	5.05966684652316	0.0364732027499319	0.808893155940216	0.0450902600449591	0.964035364886005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86562861924882	1.26637849737819
Merged-chr16-95705513-5	17.0128544118844	0	1.28086512206923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123423062-4	5.22302442380757	0	1.31668991990483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14552339-2	4.85491269981525	0	1.35186252540279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32547762-1	4.43960809718584	1.21397955536598	0.73432939055568	1.65318121673892	0.0982939880402098	0.612600757508398	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82044415287738	2.61314253431055
Merged-chr1-135740451-2	6.71609545645795	0	1.31514525883321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135235829-4	16.0614024448537	0.22463531886895	0.407472359646465	0.551289709721294	0.581435091440105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55554165876882	4.86464355160803
Merged-chr7-97376083-7	14.5755196513624	0.63101030812376	0.525464557705317	1.200861787671	0.229804819190292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89056876589363	2.96818747574366
Merged-chr11-110496238-2	10.0211451877227	-0.933601931456759	0.5685825395383	-1.6419813598477	0.100593867144417	0.623544568622564	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66802968452829	2.44857983344985
Merged-chr2-93913749-3	3.58663157331153	0	1.44236030024843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86100858-3	8.54940548836512	3.61694868568237	1.06441624395324	3.39805851914568	0.0006786590148391	0.0139458025105899	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.45795114796949
Merged-chr1-164316884-3	3.90004971322022	0	1.31629635485509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159909688-3	4.12741356011686	0	1.38593520734693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150155641-2	3.43212330821625	0	1.32065584482741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69217332-4	5.25772927701286	0	1.33295626115103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85952084-6	15.0113589053313	0	1.2888569788792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156010205-4	12.5717532644566	-1.73648751398013	0.551579255091538	-3.14821033958565	0.00164273441220437	0.0278330096056816	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14372897328887	2.22772873920999
Merged-chr5-105779413-2	5.27126579363777	-5.30045152363689	1.15022135144839	-4.60820129704811	4.06167344895199e-06	0.000245981569226336	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56000092222596	0
Merged-chr16-34573695-4	5.89855606903463	0	1.30440853839437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74938805-3	6.67926210531617	-0.757440388376875	0.545214802984738	-1.38925132668872	0.164756339004449	0.885157257961416	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81347599711418	2.87953453866007
Merged-chr2-104690903-3	7.61566671650488	0.122457558258712	0.608010466019771	0.20140699067297	0.840380349447344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30455505721674	2.49975101303765
Merged-chr5-34105831-3	10.3813182252927	-1.09242482567738	0.554636504827815	-1.96962301645926	0.0488815917772057	0.364844831099176	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24611460003341	2.69918556799792
Merged-chr2-128776710-5	14.606230511706	0.256813811973812	0.402751825090712	0.637647791952202	0.523702977759092	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33194151733369	4.61546893561596
Merged-chr5-105148253-4	7.58018398197842	0	1.32362242543847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144932961-1	6.90898981668171	-1.41611774462852	0.826643414245158	-1.71309384460728	0.086695276271701	0.556558758641135	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52003796595561	1.27256041875316
Merged-chr13-94062930-2	3.47329302485588	0	1.34979419426357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55148660-2	3.45285829907045	0	1.37351414417037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84355465-2	3.40604445439861	0	1.33309339377406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142879527-3	4.2656972792256	0	1.31100108837431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58454669-2	3.96602706189727	0	1.34144623545866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20829109-2	3.31944482971177	0	1.34455621247639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24323587-4	5.46471374530926	0	1.30824734629696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17622096-4	12.930740802029	0	1.2969172501817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97715646-2	3.35302222776161	0	1.32595643449208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6465345-2	5.11921447018856	0	1.32489570733536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18884488-2	2.82834441780477	0	1.34902858636797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45394356-3	7.90027355098138	0	1.31230851716487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25735584-3	5.08384584916819	0	1.30826575403581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57404327-3	5.42106999423185	0	1.29546637053533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21016802-4	5.5582230826967	0	1.31339623317025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102779736-4	5.152740755744	0	1.29984722426423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116804683-2	3.069352156847	0	1.34702218903286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5340773-2	2.54622862362853	0	1.34548981491816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66990235-2	2.58610176659878	0	1.38296972953736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70253224-2	2.1923123335602	0	1.38475018684533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137705389-2	3.45066774378048	0	1.33025960724914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108722870-3	4.59919810830558	0	1.30243453799251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115485849-1	3.70351965138823	0	1.33100063870021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103934841-2	2.76063217395125	0	1.35356919740345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22807599-1	3.41188413256333	0	1.32973526805341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-50805818-2	4.47714046647576	0	1.32464189833963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16229949-8	28.8403882530556	0.294843878707588	0.256683127363915	1.14866871747892	0.250692609767526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.3301253408787	5.56219686319554
Merged-chr11-79142224-4	5.53905748642883	0	1.29512493270186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127213655-3	6.45341312625032	1.91778998771445	1.18222662000844	1.6221847446649	0.104763797113463	0.643411192309805	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.683637474991079
Merged-chr19-17342533-6	21.7545877105684	-0.758332499595745	0.445283134610108	-1.70303440811821	0.0885616294416063	0.565482532488881	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2606153172764	3.72405299992081
Merged-chr1-183803815-11	34.7561754491608	1.09311975309512	0.3623933349026	3.016390335625	0.00255803729350996	0.039211237387216	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24481235881398	5.31590685299312
Merged-chr5-106887700-6	8.68831085334473	0	1.31365954869605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85123681-4	8.30028232910788	0	1.29057089367886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67672871-4	5.12286239090271	0	1.31235300991046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109208012-2	4.63384916873426	0	1.33647742114359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149219894-6	12.0869142792661	-1.04104203947866	0.529452595640765	-1.96626109315555	0.049268458611249	0.366768819367815	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61721483738006	2.30095837608674
Merged-chr3-40694682-4	5.37489271703065	0	1.31163977575814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103338939-2	4.18691116055277	0	1.36605823263544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127273962-2	4.27508448789949	0	1.33684391990033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124297483-2	2.84574914266829	0	1.42308990614869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39639224-3	4.22969716243918	1.95374123876716	1.29069909617456	1.51370776082339	0.130099975726532	0.750466831123009	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr1-9813111-1	3.55842885311927	0	1.32498114247992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48100406-4	6.52315259887679	0	1.31892965853371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87015775-1	3.93492914230403	1.8922981243105	1.21328679645312	1.55964618575128	0.118843515735936	0.705738674961877	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.892489746801999
Merged-chr10-44590213-1	3.88780382968057	0	1.31128454449447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103472383-3	4.98832530312176	0	1.31824847647436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78889859-1	3.2855552347922	0	1.39300828788631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82816192-3	3.67812419457407	0	1.33554554720418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137690920-3	3.30933302681548	0	1.35071872505319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164007648-1	2.63290709083091	0	1.34062929886979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153060351-3	9.1926830416267	1.68192288540011	0.707229206485201	2.37818640686371	0.0173980283385747	0.168104622181355	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06453489477783	3.22955830519793
Merged-chr10-83004665-3	6.85505856303424	-1.64178464246551	1.10639012020543	-1.48391115618483	0.137832491811861	0.780959161531072	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26824786717312	0.306240821987646
Merged-chr7-125470090-6	15.0675044915831	0.343349514640306	0.438534585368592	0.782947402772617	0.433657999441783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95077865425599	4.09471620856425
Merged-chr11-9388666-2	3.51320699942193	0	1.33573681125772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148989504-4	12.2644669848385	-0.318150769260995	0.808681347834615	-0.393419200421648	0.694009890753479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5656248707033	1.35032549026822
Merged-chr7-122261705-2	5.21144561162389	0	1.3479042044655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145835560-1	2.61807010857562	0	1.38807049550779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44507202-4	12.7482219021862	0	1.33756846807749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93624862-4	5.22541789178105	0	1.32616167377933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164760604-3	4.61835650543574	0	1.32893565888525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55541266-2	8.77531370370766	-0.107613249362783	0.611011995204523	-0.176122973374298	0.860197332888152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81214155542585	2.46251840096043
Merged-chr2-128445047-1	3.30007014649487	0.917712739860872	0.976775269188764	0.939533144223702	0.347457083431833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10776642252391	1.90927269178975
Merged-chr2-181931258-2	6.44992696759557	0	1.34855714943536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20311786-2	3.86542493231549	0	1.30228164797878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127135953-8	23.6534134624247	1.22810693595671	0.340427752957959	3.60754058764528	0.000309113194888536	0.00765415340401148	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87623061873278	4.89089735264065
Merged-chr14-27344741-4	6.46047555693133	3.95071562081536	1.01733999365517	3.88337787313458	0.000103015284583179	0.00324572651223358	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.99834080004871
Merged-chr13-20305827-4	8.37308417454028	-0.457274825799187	0.69112401004669	-0.661639328328782	0.508202396472318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35432650753916	2.035112151504
Merged-chr4-45499445-7	17.3761733450914	0.583954126694522	0.492409348679388	1.18591194147847	0.235657076810095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79828058048274	4.17667741462326
Merged-chr12-79545250-3	4.45829653151665	0	1.31703649230809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32123702-3	5.02735392116434	0	1.32536695126044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82867310-7	16.815749128723	-0.514709805602644	0.420430008414666	-1.2242461177866	0.220859396567263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57046218879283	3.8182777686027
Merged-chr2-129414527-5	23.7263649935242	1.05046642376278	0.323636080254127	3.2458260615996	0.00117110368573007	0.0214494527232377	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.8953013847251	5.77911236185893
Merged-chr9-85517761-2	5.80182961249031	-4.57112226707183	1.09753484633524	-4.16489944017286	3.11489827717486e-05	0.00124951591663762	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34763051163963	0
Merged-chr4-155505213-6	12.4175597745734	-0.29094092311626	0.488130171510038	-0.596031427879637	0.551154231669185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55272377758365	3.26571213179415
Merged-chr4-74311331-3	4.72024054576853	0	1.33517742531635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25050224-1	1.96131173543147	0	1.42257987353945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89353327-2	4.1974728032464	-2.78531619362376	1.13151890486091	-2.46157283069534	0.0138329309515037	0.141194424548104	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6383130110044	0
Merged-chr8-82640701-2	5.1389196112666	-4.09567900631855	1.10225234416381	-3.71573626312006	0.000202612838882524	0.00552124210576205	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86633349882539	0
Merged-chr11-100974571-1	1.46032976550704	0	2.26694363772826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101876666-1	1.32450457275561	0	1.71306439842324	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45905314-1	3.11058104968769	0	1.40645637227611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102423106-1	1.92291799677305	0	1.48150246316318	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64301364-1	4.00076499236927	-3.56190551670354	1.14811690709908	-3.10238922071387	0.00191965380474493	0.0314942750501788	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06274394007372	0.306240821987646
Merged-chr1-85591280-1	1.76030538511857	0	1.58371279511768	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11456983-1	5.10111640357188	0	1.31230699560065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145187991-2	2.93610681840918	0	1.36186411423877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56265285-1	3.2363619805972	0	1.32944787894707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5834598-1	1.44467749144959	0	1.6744365851733	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37307317-1	2.65282897385948	0	1.3872684171586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66319499-1	2.58707474227523	0	1.35077415352496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37466535-1	1.70071013536017	0	1.44015334295102	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10052659-1	1.92840500393394	0	1.46024077832216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117393014-1	3.16932762717994	0	1.34260372948831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166630977-1	2.25073451934466	0	1.36249198960587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120902646-3	5.37608576506361	0	1.32520033481147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24964992-4	14.5079445176918	0	1.29040715380428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67839121-2	3.62339810464552	0	1.35516999934007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93444462-1	3.8038467077062	0.268425237671757	1.033551818911	0.259711446257802	0.795086362702013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43979079624608	1.42690496303314
Merged-chr1-125527490-1	2.20300685361659	0	1.43999561932409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10921124-1	3.4073918691863	0	1.34211714633905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104693509-1	3.97336655613765	0	1.33302109801434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5890171-1	2.14587906101797	0	1.45333769359391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-171422164-1	2.28515994126186	-0.599560824942941	1.91810377488859	-0.312579972362426	0.754599795922809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08422468422055	0.683637474991079
Merged-chr13-113266716-1	2.82399027519765	0	1.35889439665097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32391441-3	5.14071561787426	0	1.40758672123108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59853386-4	7.93062918615449	1.42393830722078	0.675347762583178	2.10845195040592	0.0349919148282842	0.287006610564712	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46206566612012	2.47534738876811
Merged-chr11-70198537-3	6.81239056475616	-1.78171413694841	0.660025576427915	-2.69946226416121	0.00694516316567893	0.0837031782044366	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7613456166449	1.87822650685341
Merged-chr3-41245079-7	23.2786997070476	1.39985670677632	0.45686906956005	3.06402162029559	0.0021838312714713	0.0346738019020348	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53116687911699	4.54142384333744
Merged-chr5-147918461-4	6.30030034552509	0	1.31582467206273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70988250-5	9.65790396465832	-2.26452078147225	0.730352714885244	-3.10058514922897	0.00193138673878361	0.031647040579878	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52039629437659	1.34574950999398
Merged-chr18-5187020-2	4.35247446805596	0	1.36959889345455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80929224-3	7.70623300247842	-1.42782307156254	0.630337307826865	-2.26517303328445	0.0235020632835977	0.212533327889562	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82275253842042	2.61076849167644
Merged-chr17-71479651-3	8.18310398894944	1.70986073494773	0.768272572425418	2.2255912762182	0.0260415710661124	0.229590182262794	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.984416508679107	1.75520908275751
Merged-chr9-85375331-3	6.05717317545062	0	1.29533824016559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134180015-4	6.06971782376387	0	1.30898549937187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-67554018-2	6.48379628045266	-2.0785253157935	1.16025765206006	-1.79143426643473	0.0732236342176128	0.492372052025533	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02670279274654	0
Merged-chr12-8902830-2	4.77101467464987	-0.480056774225452	1.14865146794351	-0.417930754125901	0.675997746232971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.765888511628843	0.469435083901436
Merged-chr8-124247634-7	21.9956158489027	1.70957930589703	0.427403724581349	3.99991672410342	6.33647770430911e-05	0.00220951692671176	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44748297538741	5.07509810104824
Merged-chr5-113670804-1	2.14393827218241	0	1.34161765309537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34547255-4	5.2906934816201	0	1.30467589720943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4297337-5	14.0093323260534	-1.10159165928549	0.468063937698432	-2.35350679802902	0.0185972678166379	0.177202837962383	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3812738588056	3.14734463558161
Merged-chr7-31084331-2	2.24194079022268	0	1.39652573101609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40815339-2	3.21057590335723	0	1.36139104730645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167850390-4	10.7308729737239	0	1.29390659382102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34647770-2	7.70997873904654	-0.284430485570333	0.502984057447507	-0.565486085212585	0.571743186147687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72547987818491	3.2649411287479
Merged-chr1-78709333-1	2.9897369220931	0	1.38742682598032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80071072-4	5.64405000790626	0	1.32918763826451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101693023-4	11.1802565518465	0	1.30468658272417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60666059-6	13.9029921706996	1.2110739238574	0.456598376546062	2.65238333306958	0.00799257438568677	0.0929328764781295	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29657601086122	4.42344102410815
Merged-chr15-65872760-3	5.71010573434194	0	1.30839562300354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120111021-6	12.8648765350351	0.450349890321838	0.522902647167683	0.861249972172013	0.389100382617678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10909122764346	4.14411736482692
Merged-chr18-73823944-2	7.48949350217315	-1.07637370516194	0.79522068917759	-1.35355344725138	0.175878887474656	0.92902609174027	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37575674231607	1.628416560482
Merged-chr3-52859595-1	3.38482140957635	0.949845349576123	1.33536516858275	0.711300078752399	0.476898302802329	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0.683637474991079
Merged-chr8-126830118-1	3.95970394697994	0	1.32387460877977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71996115-4	4.97267078345775	0	1.30406305637407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116807659-1	1.68511849681884	0	1.51396571029802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130456732-1	2.61040858068697	0	1.36586074660039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132089995-3	3.93471788626178	0	1.32559083611795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112739830-1	3.43979611204748	0	1.36227274723193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128517981-2	9.1468823605018	0.182022611093174	0.521943004899593	0.348740397676544	0.727284213029452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23074651515349	3.52160927757765
Merged-chr10-75883379-2	3.46061044612765	0	1.33628943054943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122792926-8	34.442380388716	1.13099154427112	0.380865673982596	2.969528685651	0.00298256964193355	0.0442248685776696	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84517072837635	4.73482870432283
Merged-chr8-35663104-3	14.0086893240345	-0.466427101514124	0.52374900811112	-0.890554625003061	0.373168151019501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5962863085326	3.36012945549263
Merged-chr1-165768468-2	4.65113184552333	0	1.31236294500933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122544421-8	21.7630683849115	-0.408507960179331	0.392823041082565	-1.03992871460274	0.298373020658156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22515562650639	4.78463631711108
Merged-chr15-99416646-3	9.24916660390797	2.98977605997834	0.979675760240795	3.05180160754767	0.00227472392349773	0.0357833677190376	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.491676401566762	2.39476335534657
Merged-chr10-88795410-1	2.78361359364734	0	1.36482441864197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173535389-5	14.1114451797838	-0.621224762936621	0.674336260047574	-0.921238853287815	0.356925737397564	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48851338122132	1.36540726817539
Merged-chr4-141478526-3	11.7810061043299	0.213134210691109	0.619613717336151	0.343979167548804	0.730861953084942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3542635826057	3.88554388684036
Merged-chr8-83451248-6	18.349145269992	-0.9445454637978	0.465944048813657	-2.02716499159655	0.0426455420920308	0.330924545011976	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76994957278057	3.61585580249026
Merged-chr2-71696955-1	2.32686299486922	1.8417673628207	1.39464214989348	1.32060210783202	0.186634069664182	0.969535727504226	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr10-117824414-2	3.97719707765771	0	1.32134511755653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20785372-1	3.02514402139959	0	1.33770316030997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83227121-1	4.72563296696323	-0.00936492678007284	0.873241224194853	-0.0107243296818786	0.991443386939973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14063303215943	1.97898450809916
Merged-chr3-148895906-2	7.70822648158273	0.565253763741373	0.604249502461683	0.935464177361433	0.349549136303945	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18876537545189	3.58273794203447
Merged-chrX-159834189-1	2.64820918249245	-5.03773518283356	1.21903958004521	-4.13254439420803	3.58769443144886e-05	0.00139798139724184	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63351423847801	0
Merged-chr2-46372986-2	2.83311860332054	0	1.89847528579315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97343090-3	9.85292655529602	1.42785280062937	0.623373648795633	2.29052479742768	0.0219909127726892	0.201885106215812	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01342627536497	2.78329753596246
Merged-chr13-24515552-1	2.5225872893983	0	1.3372459794316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140552611-2	2.48467023696202	0	1.5285060577991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34034106-2	3.5208129257688	0	1.32405759104579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46043703-3	7.22441203306609	-3.45114649792998	0.891753301910618	-3.87006865075325	0.000108804709993375	0.00338579787746987	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96653460694914	0.733321818366247
Merged-chr3-88242716-4	4.64793420168923	0	1.31052572315142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22963248-3	5.99371758607636	0	1.32658524297755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14239709-2	4.14053364145123	0	1.34931577359532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75837698-3	5.09740070801743	0	1.29727133415093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40095543-2	4.04482415664876	0	1.36468549765339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64296573-5	11.731259857148	0.536787609476637	0.504306677135369	1.06440710348269	0.287144317218006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63358908923694	3.72139782576509
Merged-chr6-92127023-2	4.66484410510335	0	1.36267148106432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120576476-1	2.80733411851531	0	1.38386071642379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61229787-5	12.137354846552	-0.317868574921464	0.423480479278043	-0.750609745845598	0.452887554137178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11566443615515	3.83286381602291
Merged-chr9-42083906-1	4.91714418223616	0	1.31639007390689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105736501-5	8.71856172424064	0	1.28671146373143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122986578-3	7.6500007623131	0	1.30755013963215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24275117-4	8.41331480930029	0	1.34549911587428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84635847-2	4.35335427293436	0	1.31983284653539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133418355-2	4.28528627588294	0	1.33130099365164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23519626-2	4.800207452494	0	1.31839200563383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9783295-2	4.66380105788078	-0.696700950659376	0.683643816004356	-1.01909932387209	0.308155815137371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85178840228104	2.49081581617818
Merged-chr18-5819110-4	13.6601416023517	-0.0771795960334953	0.462346535666066	-0.166930192138909	0.867424976560338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77451250601248	3.59724327178007
Merged-chr11-83272204-4	6.93129181998891	0	1.3377702279131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55641176-4	4.98675887606485	0	1.32598339919477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126210131-4	5.72416618511323	0	1.29431459678019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35406273-9	19.6046633362599	-0.422184262874457	0.536039853677917	-0.78759864584272	0.430931507032783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14453327267241	3.82922271681694
Merged-chrX-168639895-3	7.76904753400752	0	1.30061416827985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76597145-3	7.08409082060645	3.1068128532146	1.10057194693337	2.8229075453644	0.00475902933008278	0.0626856542236624	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.38660038197036
Merged-chr18-37655782-5	11.0798314430973	0	1.31367505154736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44272910-1	3.44425293079581	0	1.34098867276102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6586997-2	3.45420584153611	0	1.39144617419299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70503641-2	3.98038819034058	0	1.31804924699463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43623655-3	4.48492250715583	0	1.30528914610777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150878851-3	4.73072212787359	0	1.3525839695979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62933116-4	6.00380154614622	0	1.30880883636363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57495908-2	5.75520531129802	0	1.31991118096693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82048185-4	21.5063110765992	0.638539225998389	0.446789809164524	1.42917141998477	0.152954969994148	0.84154209558286	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38110854836168	5.20913182021569
Merged-chr13-29431118-1	2.693336824137	0	1.37656221773489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156686686-1	1.21654114832206	0	1.67666999919174	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135905517-1	1.94578373350512	0	1.43396319996385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105309391-1	4.57213629759906	-0.258927002058893	0.9058083200358	-0.285851869906272	0.77499157841982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66684976320793	3.20325780798967
Merged-chr3-21129035-4	9.7350942422485	0	1.3046279988906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46451448-1	2.31465151332217	0	1.3457149499189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45197024-1	4.21659097844604	0.431075094036826	0.947327048935406	0.455043582383996	0.649077884916991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22139527411201	1.88639437725876
Merged-chr5-30652364-2	2.87192249936385	0	1.34370825533772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-92142845-2	8.11555442768583	0.434906450894439	0.698045846741292	0.623034221784608	0.533262033523604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94491644960365	2.66774410987975
Merged-chrX-7294243-1	1.22310027835543	0	1.43449480678968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43873015-1	2.49532308804805	0	1.51166646074841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64361313-1	4.78856126088946	2.5930552892747	0.895827335233626	2.8945927270666	0.00379650759361265	0.0529194934326391	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961706022068083	2.91004988381885
Merged-chr7-101649633-1	2.66010511302183	0	1.33974668426545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122142431-2	3.30780072032514	0	1.40209767996648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118804296-1	3.11024753620561	-1.98562416287353	0.970034545117924	-2.04696231991629	0.0406617843265409	0.320015049813578	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96225201429573	1.10669213789164
Merged-chr7-135689775-4	7.04305535924541	0	1.31082954834216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18998170-1	3.48964107653214	-0.474799124868798	1.14238778243642	-0.415619925360347	0.677688143980403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5183283013115	0.843323834477631
Merged-chr14-13130855-1	1.90307914496024	0	1.44787179251541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68158514-1	5.28563393607358	-0.193636591104578	0.828338860005443	-0.233764948686949	0.815167462569191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98998735093877	1.207189364431
Merged-chr7-128225333-2	3.67397462469517	0	1.33818672499687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108706608-1	2.20886345918091	0	1.43556889903183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-43523482-2	3.93042382215037	0	1.31364687778134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128811061-1	1.74278473625342	0	1.40789637836816	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111647479-1	2.00171266591165	0	1.43520140770327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27592425-2	10.2036932977989	-0.547473329828412	0.903964851779196	-0.605635638101269	0.544756731654482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50226328539146	1.40000983364339
Merged-chr11-32189074-1	4.37072698268812	3.23586507871933	1.31159202390648	2.46712774989401	0.0136201755514202	0.13969926096109	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.18395292683035
Merged-chr10-127171125-4	8.34810936661068	0	1.29593010584857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77058800-3	4.92702976692158	0	1.35694871942189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107639824-3	6.68138223071715	1.17872431858489	0.668473645632142	1.76330708964635	0.0778487102244601	0.515149551223045	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08288659461663	3.64161729879494
Merged-chr17-64945838-2	4.30473007145939	0	1.34504786419654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73619221-1	4.2062100580814	0	1.31808786218483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13584713-3	4.82745392351268	0	1.32394222603357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11118159-1	3.45955028340678	0	1.34579073836472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24378695-1	3.83417388120777	2.08618851174953	0.994544522969263	2.09763209546527	0.0359376575935443	0.292779226169773	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860868482386745	2.22543856127253
Merged-chr4-34797735-1	2.08373779401124	0	1.41437300613555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6565922-1	1.94770651087476	0	1.42816832202068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130400906-1	1.30123277245515	0	1.85604858074969	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59222459-1	2.89734696128624	1.7844330049164	1.06902579045481	1.66921417691637	0.0950749414888237	0.596864936740194	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	1.56343534314907
Merged-chr15-93318975-1	1.89403013626952	0	1.49670255518849	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118490331-4	7.18783521640639	3.51764193878782	0.971778495798745	3.61979808567026	0.00029483299134311	0.00737601709506388	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.8961882943025
Merged-chr18-80455711-7	19.7580792095002	-0.800171055837386	0.371287865690841	-2.15512309929262	0.0311522025662773	0.264030068598697	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.91269819477151	3.99026170905788
Merged-chr12-24952385-6	22.1050079187348	0.412967951143973	0.453246650576574	0.911132935276272	0.362225334829648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74245245069955	5.02490250109708
Merged-chr1-105982845-5	15.8488893914216	-0.0459371830237805	0.743982593759343	-0.0617449701231047	0.95076592728633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71769195265637	1.34557707159302
Merged-chr4-133598906-4	12.0784606060674	0.820611478377011	0.43274860468272	1.8962775835607	0.0579233488289246	0.413758105878324	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13800560720581	3.80636424652155
Merged-chr15-86051224-4	4.23292488173436	0	1.39019526376217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95232554-3	5.12325899879554	0	1.3120886462784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45543586-3	7.73323061378165	-0.388675971826184	0.563478221989517	-0.689779935866651	0.490332588115119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21939034508936	2.83031286297958
Merged-chr9-41191323-4	10.8771366220954	0.161676086793249	0.52412267049184	0.30846993632527	0.757724772957848	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44709780691219	3.63444507978233
Merged-chr10-19008790-4	12.1583686474175	-0.6496303226188	0.582268568974865	-1.11568845930072	0.264555512240671	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60355882578693	2.60033597541029
Merged-chr18-34196077-3	5.88004368412108	0	1.31132817226855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36437389-2	4.07903895570084	0	1.33616919038711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100211850-3	3.94493924194829	0	1.32640189717897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56466580-3	6.89116936651717	-1.20463606097136	0.921346914879744	-1.30747283299754	0.191052175617884	0.985669940622633	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75394506801565	0.892489746801999
Merged-chr4-120016894-3	5.13708862859081	0	1.29613431308013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9660061-2	2.939520514677	0	1.37734845385513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-21640314-3	4.80086432620514	0	1.38629557711905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80319095-1	2.80110047459369	0	1.34923652966108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121689768-1	4.41249532328323	1.88494461645728	0.851676455388448	2.21321677326112	0.0268827042437456	0.235285003750522	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	1.62559269623071
Merged-chr5-147363203-1	2.41850754780505	0	1.46915866471934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110932482-4	10.2763588327498	0	1.28862287616665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17170158-1	3.87143624891286	0	1.35142504169112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32230308-6	10.7957853520538	-0.346803727984301	0.544111745471987	-0.63737592667379	0.523880005173419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96831329154093	3.20222694306893
Merged-chr7-34407721-4	5.57635967671345	0	1.29653574289207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146676372-7	16.5844886496239	0.638812089783368	0.385699846339939	1.65624149411858	0.0976729232997294	0.609625196786006	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82514331457273	4.43382466764566
Merged-chr19-14507835-3	9.21333470819942	0	1.29550490184693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125488993-4	13.9255118711829	-0.314648919635192	0.439189721275948	-0.716430518275937	0.473725556323378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11070249751176	3.50713626499385
Merged-chr19-41656214-7	23.7216607357013	0.426399073907972	0.298449279444913	1.42871537401944	0.153086057180443	0.842050630682933	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31313319029699	4.85757888154098
Merged-chr17-86293517-6	15.3581963831359	-0.170716554234619	0.540994094827767	-0.31556084598108	0.752335860535274	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72262568010623	2.52267505509848
Merged-chr8-11336689-3	7.10385301305521	0	1.29728347651102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120293975-3	4.62952312911796	0	1.34406569876819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45069468-3	3.81099163212078	0	1.3797024492189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62653252-3	4.84409197698602	0	1.30237113642835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5054024-3	3.92347838268411	0	1.3256701130807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64875823-3	4.28601928599662	0	1.32319285720041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61967475-3	4.87073556807054	0	1.32981233382623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103510458-2	4.29468064348348	0	1.32052139441513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56944935-2	6.09711331012396	0	1.3303560215865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166728419-7	17.997008546581	-0.03727725045767	0.393252828947239	-0.0947920719539726	0.924479984180533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87168153957542	3.87046754444542
Merged-chr7-89236834-4	5.71926651481668	0	1.31019836969155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117105499-3	6.91140860086522	0	1.30076322509039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69402226-7	20.0871931360056	-0.42419842586117	0.440066243720508	-0.963942206234261	0.335074901915992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2679306054225	3.90238643930288
Merged-chr13-46168966-5	11.3601014723458	-1.31611575327133	0.669812842838549	-1.9649007440554	0.0494257266073171	0.367520884260553	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18728556284468	1.48233004913473
Merged-chr3-154428524-4	5.7778317514022	0	1.29598730669858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29252638-2	3.90821282026357	0	1.33644614263936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8990556-2	3.34116145635516	2.51346859878909	1.35894513565228	1.84957327036065	0.0643750783087526	0.446424054670885	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-130689641-2	2.58617897054493	0	1.57942091245841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25073086-1	2.38775573596503	0	1.36567118070329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88689745-2	3.32491806282002	0	1.33405111786643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127759931-2	3.91199609988998	0	1.31102373373381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46505076-2	6.14579885229984	0	1.30049762654076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58111261-2	3.15167437798539	0	1.33624107355265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150116817-2	2.81871967721032	-0.909805314965042	1.31843914974867	-0.690062423539587	0.490154932320072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.608998403723376	0
Merged-chr11-59015278-1	4.06671231694122	-3.47289871888751	1.14537930369145	-3.03209487695009	0.00242862855748567	0.0376962379376386	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19916127523258	0
Merged-chr5-67821028-1	2.55078138287985	0	1.35793340704835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-22795454-3	6.12826472461212	-1.21606603506692	0.915696053932866	-1.32802367100303	0.184170287171461	0.960171659925506	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53910994304245	1.44027592657175
Merged-chr9-32657002-3	4.12866485767718	0	1.31274458943112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13731030-1	2.92573373959314	0	1.37579164442617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98289748-1	2.5528009044982	0	1.36252332258979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100166401-3	4.29264446706102	0	1.31338238505753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57859866-4	5.40010307230678	0	1.31519329490381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57730530-4	4.61867358268964	0	1.31452120269293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-66987988-1	2.04618366947421	0	1.42150237800708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132899254-2	4.55163598443272	0	1.41939049840531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120136263-2	4.36161138713242	0	1.32980693403655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65873185-1	7.05420294903161	1.19173181229014	0.662244741975731	1.79953382300137	0.0719342786110489	0.485790537194611	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96383769360719	3.47935912293436
Merged-chr14-69862674-4	4.59760916784016	0	1.31073040841791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84348287-3	5.11039709702645	0	1.31770625294238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144988536-3	3.31066529962237	0	1.35267053337603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27388555-4	7.70468532614397	2.48083679639565	1.20719115472348	2.05504885178182	0.0398742864676465	0.315795070114511	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr7-44887092-7	24.2625381110428	1.3481169561924	0.42366350932568	3.18204642721795	0.00146238374140769	0.0254829141242738	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33480772015221	4.69102724076653
Merged-chr5-102052351-2	6.81757875897649	0	1.30015700976254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117933047-3	4.83268751050569	0	1.30100824249379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65073436-2	2.85606239604711	0	1.56894629540691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29523863-3	4.51864361668537	0	1.30545288564091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36026012-3	6.35045991306528	-2.57697510641999	0.9051732523033	-2.84694128981676	0.0044141502342776	0.0590958945316746	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32043220721603	0.733321818366247
Merged-chr2-153092416-1	6.96634086312134	-1.02992497585093	0.725124933953845	-1.42034141652683	0.155508309145873	0.850913161537899	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00362813424284	2.3356278069727
Merged-chr16-30775423-7	12.8763296156625	1.70650379865576	0.729932548182346	2.3378924571938	0.0193928276561447	0.183074792837103	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.821695057402385	2.24517688100283
Merged-chr3-83865508-3	5.7847051573427	-1.99446111917438	0.96174416573593	-2.07379591187664	0.0380982690146034	0.305019540189693	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35973136635856	0.683637474991079
Merged-chr4-59332549-3	6.70103740789496	0	1.33927643458526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45933541-1	3.22550741642796	-2.49936938295122	1.17997040603672	-2.11816276930715	0.0341612850675296	0.282284184878957	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81155567161193	1.08186277552917
Merged-chr14-76988846-1	4.70369823284159	0.600433412553175	1.01262735814676	0.592946070163509	0.553217244716559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.804694039803978	1.07938469868934
Merged-chr11-49755376-4	7.59398605934717	-0.360560187275804	0.72121276028921	-0.499935951121022	0.617120176953095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59653462746033	1.5122114716189
Merged-chr18-62185775-6	15.2775895083378	0.146304315737349	0.473890578074026	0.308730163684527	0.757526796651832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92669226287291	3.65957170031232
Merged-chr18-12734678-2	4.0941598534511	0	1.42510117319146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101699502-2	3.54026146888598	0	1.33961391896109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-103578317-1	3.76733377802087	0	1.36126861250139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119470454-4	6.55317340729339	0	1.30131674409577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25648834-5	10.0170079914541	0.134429105973095	0.656561510433178	0.204747162050976	0.83776967089668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1631624731905	2.31465917458896
Merged-chr8-33607522-4	21.7588894075319	0.678200125540102	0.366648255582264	1.84972958472984	0.0643525342262522	0.446362456379224	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03938557395896	4.58492935629408
Merged-chr13-49242421-3	4.31621140245319	0	1.30371909227842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60526960-3	6.6719483750078	-4.08360702581063	1.07491710369043	-3.79899716153989	0.000145282756086612	0.00425724079786355	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90198933109684	0
Merged-chr3-69632345-2	6.88140602337132	-0.888144773439716	0.79727921108378	-1.11396956184574	0.265292244959627	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37182378271175	1.66607765809661
Merged-chr6-73368235-3	6.87686092535743	-3.49342789876496	1.05569992428303	-3.30911068421027	0.000935928290319935	0.0180997839772851	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03474063555393	0.306240821987646
Merged-chr2-58489744-2	4.36834407034112	0	1.31838903461849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85842167-4	6.45849069052294	0	1.30610085923635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136551104-3	3.96259610199053	0	1.33336341223781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64786063-2	5.10546494207387	0	1.31202647879407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85963691-3	4.88405959217529	0	1.33223748857608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173528049-5	21.6090629831254	-0.466812899371363	0.397097766929534	-1.17556163304791	0.239770094727715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38640500911331	4.71346230466797
Merged-chr6-56653266-4	6.30627482449563	0	1.30092606441727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79367478-1	1.94167320806925	0	1.37184633047248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19158015-2	2.3080632115585	0	1.46582312323105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156652324-1	5.5140415189727	-1.20717140708117	0.802089642438278	-1.5050330327312	0.132315584349789	0.759913356909941	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23718739644358	1.11779166918352
Merged-chr6-5108055-1	2.23328288643632	0	1.44860257305297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37250246-1	2.03347114575511	0	1.48296921816702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68956297-1	1.84879419555196	0	1.76769813249385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-11637245-1	1.86364219052532	0	1.39199083998433	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61055130-2	4.03876927188976	-1.10886379885901	1.06254052714063	-1.04359671046434	0.296672015498539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55764025216504	0.683637474991079
Merged-chr8-69149389-2	5.33119720081363	-1.58726351622092	0.748014876398517	-2.12196784623209	0.0338404382555759	0.280448608528708	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14681410816584	1.61477032079243
Merged-chr4-122826921-1	1.78014232375437	0	1.40839535369504	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43895008-2	4.56976920457867	0	1.34078693889833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89916469-2	2.75906291422428	0	1.52914237956507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24051271-4	17.0133624094655	-2.80275923229976	0.486347082475165	-5.76287867922571	8.26912376632749e-09	1.51359709141299e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.95600071879043	2.80950514011689
Merged-chr9-96396682-5	10.2551135726424	-0.458049798591726	0.591803234470989	-0.773990022209282	0.438936691751622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56572914988107	2.54052543883245
Merged-chr6-115654130-1	1.80170628398101	0	1.4338183641039	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50525052-2	3.34771808914242	0	1.3495094418023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78270851-5	8.40357447741743	-0.703733368650889	0.928013710370446	-0.758322167858891	0.448258139568116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49259341981893	0.989878296978726
Merged-chr18-4347888-1	2.117287518401	0	1.38734046469029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117096270-1	4.07913681613462	5.02255816683203	1.20465978068808	4.16927521558265	3.05569821988267e-05	0.00123029978975017	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499615150807969	3.920838138174
Merged-chr2-181178200-1	2.03604536682215	0	1.36967618540657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78815612-1	4.50976977821381	2.27809500076228	0.76623107391595	2.9731174815447	0.00294791594427024	0.0438703063753776	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17099483890549	3.12177115688982
Merged-chr16-42895922-1	2.41507892833173	0	1.43951275380921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6460335-1	3.25950796026434	0	1.35263776410114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24902115-3	15.0566672850046	1.0823189351982	0.584177865220042	1.85272157614278	0.0639222758312182	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43090762953324	3.57254116657497
Merged-chr19-34662288-6	11.549298971447	0	1.28995496150135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31814280-6	15.5799446246909	0.194168040992977	0.406532673494366	0.477619767493713	0.632920858814571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39324520900976	4.53745512203729
Merged-chr2-163710981-3	4.72208143129089	0	1.32669563921665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116096576-2	4.55261335156891	0	1.33066656449573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33077262-2	6.0468131912841	0	1.31405812290274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39370903-3	7.18420425012197	3.39579275462286	1.09574227687225	3.09907979850517	0.00194122727266958	0.0317605000901018	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.60572551668653
Merged-chr12-12248060-5	17.693359254698	0.127950919012275	0.49186946200124	0.26013186200194	0.794762061377988	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60342340143523	4.92786116605019
Merged-chr15-98153107-4	4.43945720074111	0	1.31856817849411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120219135-2	3.99918374070209	0	1.32369958225951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40631441-3	6.66748355432222	3.38210515659621	0.982137664827905	3.44361618306211	0.000573989915705585	0.0122375024573237	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.30923017122179
Merged-chr17-26009664-2	4.7396579575784	2.45974115523712	1.23024942081713	1.99938411968798	0.0455668088140482	0.346596285503759	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr19-8252244-3	4.78562900245508	0	1.30988848098117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64925945-4	5.07015859192068	0	1.30971107219316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9718227-4	7.29095574990315	3.37806274207237	1.02354741682129	3.30034807040326	0.000965649822689164	0.0185592215627783	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.87666011399951
Merged-chr8-124221611-1	4.42020206354338	-1.61696138851179	0.887737461627868	-1.82144097596909	0.0685398512116927	0.468151470396077	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57325043985648	1.04181016172925
Merged-chr16-11070262-4	11.2989303928147	0	1.28744275580002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77524463-4	14.1676118457631	0.81015841024374	0.509812288949927	1.58913079932311	0.112030865609047	0.675283692590977	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14167687112178	3.22676437153302
Merged-chr11-47197520-4	6.77797586313443	0	1.31039237248116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78186207-2	9.09165260002486	1.89012025282699	0.857516632341181	2.2041791162308	0.0275117498641988	0.239704374216792	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10302531769481	1.77777167463237
Merged-chr8-84202051-5	25.5120870147614	1.14124800007959	0.396909282723834	2.87533713559848	0.00403596300179552	0.0553365586058182	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63239621051763	4.78309252300059
Merged-chr11-61529564-3	4.9668818063335	0	1.33426047748881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70050024-5	10.040636221839	-1.35918013354401	0.522628221689225	-2.60066348723172	0.0093043673330323	0.10493669101559	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17827258675759	3.04845038512503
Merged-chr19-34751324-6	12.3492320656983	-0.617573003163684	0.563976313099105	-1.09503358353839	0.273501923741892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22766370963183	2.97326329664337
Merged-chr15-67709659-2	5.01330130974504	-5.33744733772099	1.07571780668192	-4.961754192937	6.98593688134799e-07	6.04340877584918e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00585500435001	0
Merged-chr11-94070547-2	5.073187256002	0	1.34936041635084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17294611-3	4.69875636502691	0	1.30645786493028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29388361-2	3.33493848338803	0	1.34316659683186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70635625-6	17.4261960678249	0.842079635269752	0.458964921443213	1.83473637292767	0.066544760184105	0.457826268581862	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46515919706043	4.16733407404903
Merged-chr1-59953067-2	7.64369650389199	2.05881349014039	0.686000891943484	3.00118194352145	0.0026893382284724	0.0408406915820956	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11698580247857	3.21242961094002
Merged-chr14-66168626-3	7.44969224855747	1.54713486832106	0.783552916797114	1.97451229541101	0.0483235207611812	0.362127154548182	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21268648342281	4.13132432600734
Merged-chr10-93577703-3	6.11520884920116	1.33154604835627	1.05849525546428	1.25796128181247	0.208405759092384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	1.11548603074465
Merged-chr11-100555766-3	6.16810011542864	0	1.29778238389797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55863943-2	4.36689270613316	0	1.33320447836801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95747527-3	4.10637048998855	0	1.3612285505708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37584739-1	2.13755966607841	0	1.41296138445149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138972642-3	6.23237587701109	0	1.31357126633234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99050711-2	2.73254747035506	0	1.46545571738587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3023638-2	6.04061707751157	0	1.33883692605666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55847962-4	7.1986820756104	0	1.29902251779383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60178379-3	4.69385258602403	0	1.3117891182107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44171650-2	5.05196539600501	0	1.36303730578305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99484441-3	5.44917034508978	-1.18712467215818	0.763887281758344	-1.55405738583003	0.120170728848681	0.711357591026898	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65542115044222	1.77802408088656
Merged-chr8-85800419-7	21.4965520160285	-0.868820352203357	0.353736566524516	-2.45612253417726	0.0140445259839033	0.142574739000178	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.18612295299439	4.37944804489494
Merged-chr19-36347990-6	14.0802243827071	0	1.28778259253377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79036159-1	2.26351365860467	0	1.43135053311187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32683899-1	2.61607420135714	0	1.42506457069758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108845544-2	4.59748503346629	0	1.33282852539125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21909081-1	3.36781275615304	0	1.34588634922517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150837718-1	2.45173678178158	0	1.40889109534548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42268888-2	2.77371250194208	0	1.33506834382638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146433234-1	4.5218157113098	-0.9507365824281	0.919006071264943	-1.03452698753065	0.300889866991173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26765287078773	1.75122680664397
Merged-chr9-3018803-2	6.76885473918428	0	1.32479509974944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-49608988-2	2.64053430987901	0	1.3905424810657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78778593-3	7.78310798768669	0.942383076562052	0.807538579176568	1.16698211189239	0.2432175935561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18513028472963	1.46168672155135
Merged-chr13-5938161-1	2.30437026358519	0	1.51269308147319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38444255-2	3.46116752269601	0	1.33932036535148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-1428-1	2.63914061488214	0	2.4332525101262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45231035-3	4.60437136314493	0	1.3079789296588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157386667-3	7.82766759050816	0.19255082210744	0.606353500750035	0.31755538950342	0.750822217743319	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94185394207531	4.10067909930749
Merged-chr11-117306889-3	5.88005845062685	0	1.32337667194609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79482142-3	8.73646896168149	1.91249625931021	0.79839155993442	2.39543646912713	0.0166005908146951	0.16205291415851	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.814777624442019	2.18210741161866
Merged-chr15-9111137-2	3.7425297364194	0	1.33216703581272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28688022-4	6.09103890393099	0	1.32700194951573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32408002-2	4.31019022871105	0	1.32722110020184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-5213913-2	4.85427293604379	0	1.34603538750511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3946290-4	5.61252990461907	0	1.30255827099257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58202840-5	14.4362480541231	0.0148851896402632	0.481092070079395	0.0309404177828304	0.975317056611612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5185728877624	3.33605717110028
Merged-chr10-93471517-5	17.8378096483288	-0.239291665256059	0.437538991841676	-0.546903635373935	0.584444938029484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1475602518882	3.8366143915177
Merged-chr2-165075121-6	17.4755908864908	-0.0647618840843025	0.328878744388082	-0.196917207905301	0.843892327368514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60887247423829	4.56177427326683
Merged-chr18-62972929-3	5.30866681271741	0	1.31661272041535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128339502-10	39.3673078716268	1.39514719975877	0.29722773055752	4.69386620535655	2.68089408591446e-06	0.000176776695194921	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40603563643683	5.76235210656559
Merged-chr4-139201929-4	19.3492934777589	0.982115963747927	0.361982451548397	2.71315904830988	0.00666451108730187	0.0811287521443421	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60537173093401	4.34159614444462
Merged-chr11-74501003-2	3.11662809237169	0	1.34971567445538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89453259-1	3.02725701276168	0	1.32884794490156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45912907-3	3.56550442621445	0	1.34749967365369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150608841-3	6.83368913708777	2.41755797395881	1.19135792883042	2.02924571655151	0.0424332692627433	0.329590444935603	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr9-77746572-3	3.46089473577862	0	1.38142774564245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24445436-1	2.74325969588348	0	1.35877407693578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149281630-6	12.0315876804582	-1.4578612596025	0.662532064859044	-2.20043879674362	0.0277757777783306	0.241521753120798	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.454786946668	2.07442133902704
Merged-chr11-67636617-7	17.2605123821994	-1.36427715618536	0.494931757701966	-2.75649548640783	0.0058424419036954	0.0733064916741321	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40404521140476	2.30325144510655
Merged-chr9-92485114-4	10.7208271387471	2.36029827676834	0.505048667965807	4.67340758718354	2.96243034064368e-06	0.000191287522766504	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36139781149359	4.94111885486738
Merged-chr9-65598936-2	5.11039954012574	0	1.31735599056651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88433699-4	6.33416517915438	0	1.3152282859736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54730092-4	4.67169811020088	0	1.31611600858283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125270423-3	6.35974211806485	0	1.31269487470891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126745514-3	8.76794104963066	-4.73532321954365	0.971482781735636	-4.87432542147952	1.09180887071445e-06	8.58980728757792e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87750682281193	0.61242769162773
Merged-chr10-111411742-4	5.79504403973494	0	1.31284219531006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99603898-1	4.33371120043162	0.597640279802334	0.825184657913303	0.724250353022347	0.468912050538313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77949691777149	2.30039026721351
Merged-chr11-54464788-1	3.00305596599736	0	1.36899823679498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115488285-6	17.1099408383174	2.26497547359884	0.549555314153239	4.12146951410841	3.76463295247789e-05	0.00145736792009846	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48678718607021	4.45009380789689
Merged-chr18-65704171-5	15.2886873985315	0.0965600529368717	0.422508440785944	0.228539938177926	0.819226511341783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14637327434502	4.2220786048172
Merged-chr10-8513440-3	4.84042145889686	0	1.29355881987894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92711801-5	14.1330006012347	-1.75187990093169	0.527517065585279	-3.32099189812558	0.000896981411330936	0.0174915390345662	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07548372683777	2.13923004754663
Merged-chr4-154933739-4	16.1748919131578	-0.496581521472591	0.505649566322382	-0.982066542811965	0.326067066869998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95333804747572	2.90518378392668
Merged-chr9-63960516-4	6.8722064743173	0	1.29483799269214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53856851-2	3.5768912935693	0	1.31928825904075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46961475-2	4.08468571533506	0	1.32793403622967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160441364-6	13.9603166611417	1.68333520373965	0.486851228646587	3.45759670447831	0.000545016596881491	0.0117501334674424	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71110227204151	4.35629291665924
Merged-chr1-189867193-3	7.35986371354281	-1.66812203364176	0.555886422020731	-3.00083248584825	0.00269242636852331	0.040849615388327	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19782582504553	2.52024010234604
Merged-chr15-101975701-2	5.13850417952239	0	1.2939114384205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90105666-6	12.910505734791	-0.433526015544848	0.452537457079189	-0.957989242134682	0.338068183293486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8980928416598	3.43799893445454
Merged-chr17-29377743-2	9.52854357230805	-0.180715263667489	0.657328797241558	-0.274923697890386	0.78337486014143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13516845797506	3.80363277275322
Merged-chr19-32907022-3	7.31254296326108	0.333927123650185	0.752616593066193	0.443688229473857	0.657268006603373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71339393945068	1.8405601103675
Merged-chr1-57429939-3	3.9733176878631	0	1.31112418563078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50286551-4	9.02640990896039	0	1.30934397032082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144287346-4	6.15386731946018	0	1.30217371509943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79535506-4	5.588709744843	0	1.31944506077812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36549287-1	2.50403343496928	1.97838199031448	1.28945882876727	1.5342730967268	0.124962481404825	0.730328084239305	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.73596151290311
Merged-chr5-64240398-2	3.3526157590688	-1.20128865717677	1.13349448135192	-1.05980988610019	0.289231098320504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30899181722539	1.31734301959449
Merged-chr13-3780664-2	3.1625426267989	0	1.42189918469402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120720594-1	2.01546679740539	0	1.43829731112698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110481197-2	2.93865482286906	0	1.40461189088396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96661664-2	5.12778883307452	0.675151811850833	0.760389809741132	0.887902235408287	0.374593342180831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31767759000785	2.01259914296816
Merged-chrX-101815596-1	2.58817506981123	0	1.42397329688551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109104234-1	2.21712425175271	0	1.43865137897862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113364575-1	1.49691999149379	0	1.86258847008839	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40202411-1	3.07357529490065	0	1.35927567740854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3645801-1	1.71774339308826	0	1.39732027319051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56338002-1	2.57477826879373	0	1.3407323244881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92145160-3	3.3222572981852	0	1.38540014484047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43112866-1	3.29422768802527	-0.856289245374187	0.979126226495511	-0.874544284692504	0.381821914394479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.004676364417	1.41959898789419
Merged-chr18-9743412-1	1.42168295251279	0	1.604472458096	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155682109-4	7.09734236153837	-1.98246447483873	0.657745350737401	-3.01403038822879	0.00257801982306831	0.0394342891756138	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80324835941958	1.37490486545505
Merged-chr9-115777308-2	3.27192647891636	0	1.34311250827711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121597776-1	2.88019188947881	0	1.33320275262265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135324881-1	9.71812856448581	-1.67334039859459	0.623617548866712	-2.68327984296709	0.00729039580837008	0.0866651272500912	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5830363640709	2.19751042397086
Merged-chr2-90560232-2	2.64965836040369	0	1.49768524433771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35693299-1	1.68288901822087	0	1.50651010757359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130691543-2	6.11850288904105	0	1.30499822946481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28743734-1	3.83974307587388	0.105973308862499	1.40446641950494	0.0754544981572812	0.939853099491118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr12-35831431-2	3.71048125241149	0	1.33960638630762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52861439-1	1.97666038011546	0	1.38807184314935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149793882-4	17.0566837941389	1.23981708708748	0.485983892252303	2.55114851922667	0.0107368560876812	0.117149874420707	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07171674086713	4.01231564474398
Merged-chr5-136933418-1	2.74524326212415	1.7718726466686	1.3439151902601	1.31844082090156	0.187356123332181	0.97259081945223	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.581381506691384
Merged-chr2-167723983-1	2.62042764538013	0	1.37472866359221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63980292-3	6.37737916724163	0	1.30514879839597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141514429-6	14.3246016433382	-0.917554802165348	0.526093198710761	-1.74409173966495	0.0811430942089387	0.530396782452467	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60748140255975	2.49975101303765
Merged-chr1-156085965-3	12.3391968173186	0.305523725216017	0.505103895492249	0.604873032939626	0.545263362509884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71716873569255	3.97357786813651
Merged-chr2-166684225-6	12.5452325446354	0	1.28450004984905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8493491-3	7.90425028770718	1.92364592958995	1.2610772793536	1.52539892763428	0.127159626076927	0.739105798167518	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr15-50997297-6	10.785983815707	-1.38021356749641	0.637788657076106	-2.16406101328909	0.0304596671183303	0.259709995761275	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30635449999883	2.00098049458557
Merged-chr1-72142092-4	5.4277969064263	0	1.30331643057608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48138778-2	4.49201758519392	0	1.29769765825074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34103002-8	19.2090859047749	0.86261016313621	0.35478860870079	2.43133556710015	0.0150432748416135	0.149941708023196	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93828262704985	4.72593296681456
Merged-chr4-3419899-4	6.1310040602328	2.49508735075398	1.23219724581737	2.02490904700804	0.0428767044598126	0.332258404911404	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr12-79072728-4	6.49333010407727	0	1.30352636810508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49907534-3	4.22575206831661	0	1.34156235820763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38093229-3	3.37162897648221	0	1.38631795110583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52802348-3	3.94435585654558	0	1.32645671670369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54206406-5	11.2271690840854	-0.580224780648732	0.555545321654862	-1.04442384452155	0.29628933642774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18516421026146	3.34100553314502
Merged-chr4-132947822-6	12.7988436077946	-0.658175594498717	0.532070831023813	-1.23700747367085	0.216084308029699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82359913890293	3.2918910912681
Merged-chr2-163777064-1	5.11884853999365	1.36145655367369	0.936776645248643	1.45334169097728	0.146128907233749	0.813506523436408	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.846394707936129	2.26028312783496
Merged-chr14-33393475-3	4.37746860800457	0	1.35252373822484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61351038-2	4.21203721174328	0	1.34078142652057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105878102-4	11.6687163098314	-0.154337940317478	0.630361632220717	-0.244840314556831	0.806580077230425	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80961051904363	2.25805531955446
Merged-chr7-28214316-2	3.94599433002489	0	1.32069666444728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88379955-4	6.23451667985899	0	1.30927815174974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92884575-3	4.66117511673429	0	1.31086766642223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62127985-4	6.0237573915002	0	1.31190259302513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71405812-3	4.26277875144844	0	1.30464565224979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66822677-8	15.6418525394349	0.382253304239267	0.392064713412439	0.974975026220095	0.329572648041522	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78126458914889	4.40267304356562
Merged-chr8-88755299-6	12.0216437550846	0.463915598268158	0.53846741204606	0.861548141800037	0.388936218437644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74494732221236	3.89502783791772
Merged-chr11-16591786-1	5.59524073031038	-1.64718425655354	0.793926915174667	-2.07473033735247	0.038011534067052	0.304506045583215	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44877593570462	1.87496859647037
Merged-chr14-101560813-3	4.05363849791098	0	1.36619442715144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21265631-4	5.14954726567028	0	1.29721538342895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100422607-1	3.55074289476274	0	1.33431518065883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95449930-2	3.45492855084079	0	1.35067568918041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73031325-2	6.27249390333962	1.95381779545023	0.860247281144655	2.27122809717046	0.0231331733620656	0.209923669839958	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736070423127282	1.94792243194202
Merged-chrX-57299154-2	4.39712460869795	0	1.3253662778993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83797996-4	6.71865491276595	0	1.29572520760545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89342193-3	6.17915813582161	0	1.30686826902458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23085804-3	7.71531024819453	-2.93450770920062	1.08099639540487	-2.71463227969558	0.00663493968150009	0.0809346216963421	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70624099363244	0
Merged-chr7-25805725-2	4.24564036981506	0	1.32591650391573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24597158-3	9.90105500285155	4.40853204068209	1.01431984379422	4.34629379248984	1.38457092355132e-05	0.00065657599107681	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.68475914241845
Merged-chr4-136971181-3	9.69279100984373	-1.48169463621439	0.566081632046367	-2.6174575402811	0.00885875087386612	0.100991614550533	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26040754671285	2.19472571485655
Merged-chr7-3962183-2	4.15582743091919	0	1.32801772831601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87033593-4	7.86126566227317	-1.35098466342051	0.742402654019696	-1.81974654334233	0.0687976118345125	0.469274399054077	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52011508723542	1.81518459389541
Merged-chr4-45455294-2	7.90556830733479	0	1.30024931862287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96896195-4	6.73196638132066	-3.47726763352088	1.03883528541201	-3.34727524406505	0.000816101355960302	0.0162390253369616	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0870377231972	0.306240821987646
Merged-chr12-11214952-3	8.72894442739856	1.68005160924644	0.675079753395902	2.4886713026056	0.0128221449980336	0.133739167923624	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73812896897852	3.98649690444438
Merged-chr6-124724588-3	4.92013115844514	0	1.30825756063853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94262775-2	2.77126429517487	0	1.47990447063634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135470649-2	3.64519534342015	0	1.35882883891054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3002377-2	4.07686666798849	0	1.34932501931767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77896437-2	3.18393488841539	0	1.34591238246352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93191452-2	3.31962884042429	0	1.32149254422618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80841813-2	2.92726818430003	0	1.37636921602065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4501510-1	4.6962290343661	0	1.32963570776067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22061376-1	2.74223286004742	0	1.42546126991812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79372649-2	2.98235207822752	0	1.38857425141384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82997032-8	20.6188793306329	0.114392076363254	0.319531709333126	0.357999137556628	0.720343958965184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65482354990775	4.87532901269101
Merged-chr5-124432570-2	4.66614287321103	0	1.31033882233696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85592793-1	2.14646682172202	0	1.35684040323788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65663704-2	7.4322927059387	-1.64138421004471	0.699327819828641	-2.3470883947487	0.0189207654092774	0.179473992805145	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.48506980191444	3.13532629014286
Merged-chr2-62686127-2	2.86503764663439	0	1.37371968107264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94129080-2	4.03313780327927	0	1.32155846669154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84723003-2	4.60698369583943	1.0558902770249	1.04357838180558	1.01179776759846	0.311634757593205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.655578355042913	1.29684500016202
Merged-chr13-105380143-2	5.71650878305333	0	1.32827945184632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101810710-2	6.49030099016852	1.29614485382424	0.814032366659139	1.59225223334022	0.111328041039911	0.672724446994083	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12034034514658	2.09282686802642
Merged-chr1-155140275-4	4.87606163163209	0	1.30202656114122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75965192-3	4.87624272047353	0	1.3248827996894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-35732570-4	8.47392663409461	0	1.29759954287282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34045042-1	4.96029170739182	-0.661351263401217	0.822220648429245	-0.804347670743432	0.42119621368585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76536375022216	2.02682520395175
Merged-chr18-57675283-4	5.44415617486575	0	1.31547320156173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33260374-2	7.26892210768881	-2.71259588657556	0.760097301180458	-3.56874821468619	0.000358690930888249	0.00853880421487196	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77892643393528	1.03956264035389
Merged-chr6-17647540-5	9.65878267160087	0.157974918871397	0.582096869713405	0.271389397694537	0.786091555585046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78812958999943	3.17521452392493
Merged-chr5-136623335-2	3.48927946863796	0	1.33965523439257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64459473-2	4.53150387664087	0	1.38025192236084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79578743-3	8.83648198405856	4.31705112574225	1.06440235573011	4.05584514399262	4.9953348347626e-05	0.0018165005571085	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.75238521850622
Merged-chrX-48405248-1	2.4257041797381	0	1.38109437914627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40151084-1	2.25109286679776	0	1.37816133047449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102981026-3	5.38200156561152	-0.407838859029054	1.31278611546898	-0.310666645711253	0.756054056235945	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr10-94359336-1	6.95977965857845	0	1.31029354957117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61083228-4	13.2064812072821	-0.138648267250924	0.743560981157443	-0.186465227149361	0.852079945325574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93367207374796	1.43116362910629
Merged-chr4-128971265-3	5.1533658587275	0	1.30562250810866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133179420-3	10.0381563068576	0.0673960046958411	0.853748499387285	0.0789412862736621	0.937079323991268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91898268192218	1.4576512849049
Merged-chr6-91153710-2	4.02849964288263	0	1.35371983076254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37956802-4	5.55983806828709	0	1.35350573052713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148322785-3	4.43180965768763	0	1.32490045398045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134628760-2	2.37035884375998	0	1.3772139166993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60779880-2	3.7953733622816	0	1.32499445398868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38001678-3	8.58204629317402	0.938665255331268	0.405973248362504	2.31213573583328	0.0207702043786311	0.193010491371733	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73627437300801	4.62317381246214
Merged-chr6-125359601-1	6.36364595780103	-0.388496906507969	0.702349005354779	-0.553139398712078	0.580167960043042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16710729069779	1.37490486545505
Merged-chr1-36128648-3	6.38164381657179	0	1.31825862010905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83618531-4	9.29614303823428	0	1.32541328055597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60371741-3	7.9790848078746	0	1.30400010488459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67184195-3	6.99940651232669	0	1.31459670033936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23519072-5	9.37695964245123	-0.130830449584336	0.586540387117263	-0.223054460456412	0.823493120722725	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81373528700097	2.22687404814607
Merged-chr13-98812432-3	5.27131170111253	0	1.31962652672933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54021534-5	15.9763149717827	0.789385757036131	0.591478155261814	1.33459832795805	0.182007845574264	0.952011900816123	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15414581927396	3.39381651296295
Merged-chr9-65084638-1	1.23852394265107	0	1.62734162652426	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106568663-2	4.62181155833403	-0.194590493240592	1.14119833904528	-0.170514174953484	0.864605787602908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.832882082720823	0.61242769162773
Merged-chrX-144232588-3	6.858372508279	0	1.33516340694008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57883924-1	2.1956178759791	0	1.38054105904059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107707916-1	2.95555845733842	0	1.34394188663439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115697800-1	2.08314954209482	0	1.42610367711107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35741219-1	1.76857128641227	2.46470009380357	1.37179045220309	1.79670305318518	0.0723827740033155	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.986577844696341
Merged-chr2-77285075-2	4.26458593030938	0	1.32719588770919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110910641-1	1.77524147307018	0	1.41758418039261	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63136393-1	3.00960599793347	0	1.35348577074401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139601764-3	12.8873223661188	-3.15526762363539	0.964865108942803	-3.27016449697575	0.00107484960266475	0.0200734844629125	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27777575923367	0.61242769162773
Merged-chr18-60536194-1	3.45150275780292	-0.74942785141244	0.852845359330059	-0.878738265048592	0.37954320605664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30858061450894	1.7953101035406
Merged-chr12-27303353-1	1.166701660982	-0.438167417311678	1.53722744659955	-0.2850374668244	0.775615437632766	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr10-44425048-1	2.38322930373757	0	1.35741720655494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37546791-1	2.6536531752209	0	1.34830137035588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171964169-1	1.89176415495155	-2.73470820500988	1.35888567336003	-2.01246378457134	0.0441710705801696	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97006930238411	0.581381506691384
Merged-chr14-70371099-3	8.91142824832074	0	1.32072523532898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138137928-1	3.7676315313796	0	1.33446839959353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37779921-2	4.46718959013908	0	1.29954416969485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60804253-1	3.56741651318557	2.96419071557183	1.15850563212184	2.55863297802259	0.0105084620965212	0.115294020903429	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	1.64254215594465
Merged-chr14-79541819-1	2.91028549940032	0	1.4046537955736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88435838-2	4.01270049901842	0	1.31656070067331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57801115-2	9.71799001224549	1.87073964376933	0.513702139354411	3.64168162920318	0.000270862921756454	0.00687104366657502	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3507138322074	4.3733725282078
Merged-chr1-128723027-2	7.54915484986293	4.16289072229429	0.841842970084244	4.94497295841017	7.61544349240076e-07	6.45445876075771e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	4.79328671060054
Merged-chr4-71252464-2	2.79162063334109	0	1.43843137470078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8240431-2	2.9261114317002	0	1.35385342784807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64051225-1	2.82478727699663	0	1.33910942477657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-31742604-1	2.05915505407671	0	1.39290613218509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96539099-2	3.29888533289436	0	1.51817563305511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27539881-2	3.78129801334067	0	1.325027729991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81004910-1	2.30825517455001	0	1.42140651629841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61387854-1	1.63335138115185	0	1.47630034090138	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32957107-2	3.42642598811979	0	1.31507792465108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83011453-2	3.62519322453592	0	1.37804558360507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103601136-1	1.45372908621748	0	1.80256834402347	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19737147-2	7.13995641167535	-0.11613681338743	0.654222277431708	-0.177518891351959	0.859100827727876	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69280051348988	2.99699765796785
Merged-chr18-88770671-4	4.72687764579248	0	1.31332451493875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12196981-4	5.70409945956168	0	1.29699435997888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87293322-3	4.95006380426425	0	1.30385357092419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120129699-3	11.8084782967572	-1.07266199892302	0.50409613243627	-2.1278917450505	0.0333460601775917	0.277442277612033	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26924215218633	3.14754462744395
Merged-chr17-51382757-4	5.26429995834337	0	1.32066697258752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128312243-2	5.54335638070409	0	1.32993481485822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81434158-2	5.25906146618529	0	1.32499226008359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60491864-3	13.552091351321	3.05628147701185	0.896715898661689	3.40830521860182	0.000653677342458901	0.0135739184455073	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.622125941405109	2.41373779137467
Merged-chr14-77832524-5	17.9382296917748	0.921400680298465	0.516302712097142	1.78461328734044	0.0743240646625573	0.497722927796625	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51985021138081	3.38753597675271
Merged-chr11-107102992-4	4.2721334087894	0	1.3287051066369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152168523-2	5.58253993932009	0	1.34754773295466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94107896-2	8.35214221815829	1.2218891053008	0.721391519389924	1.69379466275697	0.0903043086625562	0.574229914872987	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78803139528243	3.18472114098112
Merged-chr9-50780847-1	4.13343949911993	-1.05768276019222	1.04698674003886	-1.01021600345479	0.3123918136017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73601981624362	1.47444931357134
Merged-chr14-30617481-3	4.61571689575651	0	1.30923842973888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63043638-2	4.29340786422524	0	1.30586982792102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5922891-4	4.75960106081251	0	1.3190520892044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39308735-2	4.79134797060155	-0.450905921285028	0.858216356958059	-0.525398889952716	0.599305925034169	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54517736479252	2.25531563498385
Merged-chr10-37262567-4	4.77158744171565	0	1.31415943351966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25438534-2	3.87821429110532	0	1.3463948898311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120034538-7	22.5262836698668	1.01626529962056	0.448409793527236	2.26637623506506	0.023428357373788	0.212013494107125	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16303144711707	4.82924031786987
Merged-chr4-150260976-2	9.22016477987717	-0.038773826009559	0.660164852124431	-0.0587335509983357	0.953164335622992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09628522840755	1.65946941398048
Merged-chrX-169338434-4	4.83237766894504	0	1.33652657939571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-169370920-1	2.02112388572653	0	1.44877900806466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106475475-3	4.03128078004103	0	1.31745858507612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17726300-3	5.50871939061683	-0.948019224279589	0.810304169452833	-1.16995476515905	0.242019173048958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05100083393302	1.21171060354126
Merged-chr6-146410399-4	10.4489099120327	-0.777891819840264	0.600024641666535	-1.29643312261262	0.194826306801134	0.999250534752035	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56768784719646	2.37544986530815
Merged-chr5-143509919-1	3.19025536921573	0	1.33937086134096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79757907-3	5.34583172668204	4.05533903946228	1.08886116100263	3.72438579380322	0.000195791321184722	0.00538249039719683	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.08628700317133
Merged-chr1-122357216-2	4.87257201969989	0	1.31886456485902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29194718-2	3.80457594144483	0	1.32793749487741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43164379-2	5.01178394729945	-0.741534099058711	0.828706008127626	-0.89480960893976	0.37088887285116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08742549793208	1.83225203110276
Merged-chrY-90812874-2	3.91743276924528	0	1.37429870471183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48275792-2	5.51451200715895	0	1.32643398764236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125792731-5	8.39108760556647	0	1.29148124888991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177702442-7	9.7524620632344	0	1.30391336227657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8686298-3	4.98631531739594	0	1.31170095707499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16629836-2	10.5661555282246	0.339281994382015	0.627676617662154	0.540536296613542	0.588827236545264	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60199712924033	3.08320653278703
Merged-chr9-44094919-2	4.45456119375301	0	1.3642136752737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102501245-6	16.0207815897866	-0.235384150703574	0.42728142669422	-0.550887859846115	0.581710550163314	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74194156765844	4.36334452937568
Merged-chr12-40583925-3	6.2179279428157	0	1.30804441928529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-18617855-3	4.43775768694739	0	1.30227111983987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140783129-4	6.18597619613048	0	1.29804674851014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141637689-5	16.0747396896954	1.32894726751774	0.403072275220532	3.29704459774773	0.000977079850400754	0.0187238298839553	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91392973950171	5.13697289969235
Merged-chr1-177261519-1	3.29933315148074	0	1.34824393701752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86713178-1	3.90121125464544	0	1.36104939643547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55616763-1	2.2072959327419	0	1.35269531002988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54402819-1	3.62089326950841	-0.109519696030135	0.810471033561233	-0.135130919545517	0.892508364118087	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19086424799115	1.57215779683075
Merged-chr2-34782610-2	4.6023118538446	0	1.53710916062756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108742024-2	4.96768736873955	-4.54566917808315	1.1543323167366	-3.93792074619739	8.21907303407521e-05	0.00271528587707117	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34154213215395	0
Merged-chr3-152913186-7	12.8960584127946	0	1.29222758751418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126850458-1	2.87650783514607	0	1.4452781056748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14216749-1	3.49713691868086	2.76211318139867	1.17784107311213	2.34506441017593	0.0190237928720221	0.18018970416222	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.26501898168246
Merged-chr2-129392400-1	5.87694486747567	0.144730002967519	0.788270384511574	0.183604516687756	0.854323719558221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0421544186923	2.28545538398646
Merged-chr11-59248307-3	10.0120404228802	-0.483138267240846	0.604283627038412	-0.799522352787716	0.423987590761975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95513849097453	2.8277168677724
Merged-chr17-29837690-4	7.62294514187513	1.19354510606499	0.89199133380304	1.33806805159896	0.180874254208323	0.947827507257183	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02361082317924	1.50690972966086
Merged-chr13-59510158-3	4.43793723742471	0	1.33131688660496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84467907-4	6.31736372793382	0	1.31402558456005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69374182-2	4.83890986937888	-0.48237252010663	1.0238062222652	-0.471156073890005	0.637529284359722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49768599386403	0.581381506691384
Merged-chr3-10043723-1	4.5949709310731	-0.326481602101567	0.756329440430581	-0.431665864964478	0.665984280177388	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44302681651218	1.84022605426951
Merged-chr10-95795716-2	3.85150873709066	0	1.33740517078592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105508551-1	3.20534023976076	0	1.33370831334837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126652827-2	5.38485578347395	0	1.33241317178888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13513529-3	6.80278485650537	0	1.31857030902056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28007848-2	3.62305047294859	0	1.33576369971931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112632495-1	3.09188363287618	0	1.37865778354023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99696324-1	3.09269385487168	0	1.37615830864675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66279500-3	5.61553450934708	0	1.30907503012911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121329797-3	4.00191778482363	0	1.32725123692638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75259282-3	7.35616751978972	0	1.3553599374723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_GL456370-8050-1	0.983839746836112	0	2.43325360314908	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52507675-1	2.06955080268307	0	1.42161748415854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67099027-1	3.07371204751651	0	1.36735326771434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-27438415-3	5.57388662875238	0	1.31047704955829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29376580-1	2.4784774263307	0	1.40224575331019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8416297-3	4.47492492114507	0	1.31480150720516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46448923-5	8.05165105537687	0	1.29634490965905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20098117-5	11.5634207387403	-1.15702489981626	0.487615993574833	-2.372819831716	0.0176528724149754	0.170089147866261	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2301664296988	3.00096203503196
Merged-chr3-144676498-3	10.1888492948104	0.339700666415968	0.641534749099154	0.529512496233412	0.596449978086117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84681297149625	2.30779555871676
Merged-chr14-77546745-4	9.51007668949831	1.06940264702576	0.805491687455105	1.32763958173729	0.184297201873903	0.960680037783348	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.935892628934282	1.41926493179619
Merged-chr2-5041001-4	5.22354471668663	0	1.32331319175578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82118901-2	3.63319558010581	0	1.34253365068243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-84362501-3	8.06993639846793	0.319468135842428	0.55429140134217	0.57635412540924	0.56437584527442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86322178321372	3.21017871366514
Merged-chrX-143063143-3	5.51791770579923	0	1.30356149878235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128240912-5	14.6604933076176	-1.12884057422581	0.472034490402962	-2.39143663689099	0.0167825805399905	0.163463184970371	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5549350766483	3.14287090561885
Merged-chr10-122882126-2	6.82309114312704	-2.01157542076901	0.612271962512353	-3.28542795347814	0.00101827580323215	0.0192702724118181	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30505769477994	2.24476717970129
Merged-chr7-16990218-3	3.77883581859726	0	1.32060659796401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55811981-3	5.72028991597232	0	1.30624260480057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3729838-4	8.32807260511632	-1.66131793981886	0.563215175609281	-2.949703793087	0.00318078719772087	0.0463728154984539	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04302088317797	2.62235589016187
Merged-chr2-127251852-4	6.19313977716014	0	1.30166540635565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111100256-2	4.04648892882097	0	1.32582264845638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16943692-3	4.90929899182527	0	1.34837724087944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31446591-2	4.49838843974504	0	1.3186546709722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130671459-3	5.58991162786828	0	1.34235101370423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49432513-6	12.9670577363571	-1.58779051886391	0.572094848125961	-2.77539733850972	0.00551343028693955	0.0702712337683542	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00486045111354	2.05271282077275
Merged-chr5-38580942-4	10.0418834474369	-2.12794496438715	0.62000810433754	-3.43212443434234	0.0005988727107386	0.0126401602570816	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35592496735768	1.34353547422608
Merged-chr6-97354523-1	2.33690656961183	0	1.36862916093781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32280308-2	4.32641535128505	0	1.3133813164294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97296485-1	6.40020609356758	0.576493016070605	0.757616996423571	0.760929359811112	0.446699261089414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95282736968847	2.21648485999896
Merged-chr2-153117868-2	2.29938720870734	0	1.43063898218979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12052009-1	1.94606796746158	0	1.41009873738049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10675249-1	4.13254970254893	0	1.33799000007655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95924961-5	10.2537092450411	0.135896840223296	0.489256441884975	0.277761984491654	0.781195075213363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1146609520479	3.17716248334346
Merged-chr11-53309052-1	1.4414622294501	0	1.52698707065411	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151103855-2	4.09579433006998	0	1.32014743197022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127509092-3	6.38660577722549	0	1.30374863081274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173732860-1	3.09522688833434	1.39949067404891	1.14027470041052	1.22732765494584	0.219699465416038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.914098845408867	1.88086620139027
Merged-chr17-74846657-1	4.39274740818635	-3.01827604670368	1.06978281006447	-2.82139142479002	0.00478158204725023	0.0628839558036609	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72180532512969	0.469435083901436
Merged-chr11-116368319-2	4.52567266902446	-0.270521877235237	1.14926470655747	-0.235386917993474	0.813908438790556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925723919317708	0.61242769162773
Merged-chr19-59020990-2	3.96701764276742	0	1.37362216176161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34870352-2	3.46646757793844	0	1.35275758929153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25291825-3	4.29950484479901	-4.15462114427161	1.0945982670462	-3.79556707638771	0.000147306359612767	0.00430495589233268	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97278647513385	0
Merged-chr12-51832600-2	4.28514624162989	1.30548883983707	1.3566518944384	0.962287264101373	0.335905324712702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr16-10384405-1	5.7648229046818	0	1.29352926889255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54156976-1	3.06081380488509	0	1.34232731733725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95086905-1	2.41405987936536	0	1.35815520400727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30503980-1	3.01799559735069	0	1.34403220604475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120708325-2	1.99163636001463	0	1.46497061085805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45330641-1	1.66790762835382	0	1.4362094572783	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37029982-1	1.78792160125328	0	1.51470463553144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21564286-3	5.06279359922834	0	1.3036737338134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35535263-4	5.37330371176382	0	1.30924901485115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86586199-6	14.0737231540816	-0.62133307669487	0.507197925677376	-1.22503079220023	0.220563618955751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83146083097372	3.26702399068743
Merged-chr16-25038711-2	4.3502542710053	0	1.31276744650798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45724417-4	4.69679238158599	0	1.33872672752517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-49120188-3	6.86589148404271	0.6368221846931	0.87036088580047	0.731676015182387	0.464366339183137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12247448041252	1.40264952818025
Merged-chr12-113146903-6	21.651985092921	0.884300176589567	0.410541969700719	2.15398239852119	0.0312415522887223	0.264547165460522	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14723454471508	4.9462643722546
Merged-chr2-166682619-4	5.17423074464109	0	1.33235056564275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75298744-2	4.64067458749234	0	1.32639957450225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74932705-2	6.78645297372854	-0.200953717930561	0.851134458968442	-0.236101024712492	0.813354278801006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75015247153332	1.56763655772049
Merged-chr15-6065266-2	3.75156109270601	0	1.35399893925299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98768526-2	4.96010122791176	0	1.32857301031627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108730110-3	5.38848652968146	0	1.32602513011373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40060477-3	3.927554148031	0	1.36348763593804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172047099-7	19.0117625990206	-0.0678144911570442	0.362369249316789	-0.187141958885589	0.851549330820517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79121791899626	4.76520216963453
Merged-chr2-156189365-4	12.9390554589846	0.843777852731548	0.389997040365976	2.16354937447664	0.0304989504838733	0.260011013479346	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80959990051456	4.82124097566032
Merged-chr2-76255153-3	11.4464627182835	0.0166344725227475	0.588376259447436	0.0282718281977751	0.977445349456683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76226395893363	2.32453430357481
Merged-chr1-159193325-1	6.68742193185162	-1.77505005655668	0.86407043082991	-2.05428862419445	0.0399477651081821	0.316028107394393	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07611868307467	1.64500873683875
Merged-chr1-59286638-3	6.78550963770529	-1.4642090996262	0.634347733779405	-2.30821207621021	0.020987343826893	0.19453035031378	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77503594369342	2.08829123635224
Merged-chr10-82935187-3	5.29778576646611	0	1.31878519537801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29464223-3	5.37512916786639	0	1.32994201752838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92381961-3	6.29979437071986	0	1.31587473205637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20847716-3	5.05751753777588	0	1.31173487505567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167319008-3	6.19540912690135	0	1.30450129187621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-49607304-2	4.4170117692121	0	1.31543565031068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98955269-2	3.38190751399934	0	1.32572220173359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115001310-2	6.96237490115266	0.107662733546322	0.689819162406784	0.156073851544927	0.875974809204084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10159548473687	2.08954570417147
Merged-chr11-5485937-4	6.47304500650788	3.6912175587141	1.16817973485112	3.15980276715255	0.00157875972793978	0.0269855174423104	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.01087566452899
Merged-chr7-100458345-7	18.544125061169	-0.682838914860081	0.420822021492852	-1.62263113616947	0.104668280396563	0.642945426846567	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39289985405421	3.93583346652046
Merged-chr3-15284127-6	14.3592285438039	-0.271705705157479	0.464602932147501	-0.584812721481531	0.558673649488659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91776425750298	3.68119145832707
Merged-chr4-119996648-4	15.4502720470071	-1.81789708904789	0.540713092607747	-3.36203638103259	0.000773699291500111	0.0155372322994365	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45464221677025	2.16955778423466
Merged-chr17-51288904-7	18.7189685465692	0.290835579487167	0.429844156272008	0.676607033603882	0.498655315266798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19208779636528	4.50031220256082
Merged-chrX-168648005-1	2.88141267608913	0	1.42572295034974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21154984-3	3.37070572237875	0	1.36275502794541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55427861-1	5.44435622903486	-1.00476572388261	0.595348790201767	-1.68769256009084	0.0914702607110871	0.579412141956834	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75248185447849	2.42775089836225
Merged-chr5-138998184-3	6.92790584200301	0	1.30154452966882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155169769-1	2.06670202663252	0	1.4335784304012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107864147-2	5.21692841712231	0	1.30801243548948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44866513-6	13.7431481493484	1.13083874359278	0.534180604617473	2.11695957100983	0.0342632791443184	0.282875175271668	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71129330769168	3.71191227640038
Merged-chr12-69127383-4	5.30580832147542	3.14799544431072	1.09527680447752	2.87415512812982	0.00405109930320465	0.0555091497310151	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr11-81950295-4	4.58031933560975	0	1.35472536445416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28146158-2	4.9262383848826	0	1.31608706563109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3759067-3	4.73202968579861	0	1.33650115834749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118894046-3	6.01270055589039	0	1.30022123324649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93273540-8	17.5669324542781	-0.200545793394971	0.448469607381663	-0.447178114400739	0.654746462007384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52734356064575	4.28203908814426
Merged-chr5-23132468-4	13.5477152545729	-1.28927519454698	0.578033977248542	-2.23044880628638	0.0257176625028534	0.227438946259501	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29652414592868	2.64850223368472
Merged-chr10-57734114-2	2.36846181403428	0	1.42544970036416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84398735-1	5.23388592516363	-1.08182022116345	0.698251752785045	-1.54932689656489	0.121303157239466	0.715533138921296	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27221482718864	2.09942028614263
Merged-chr18-60757328-4	8.1842909993963	0	1.29699519753054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-30010780-1	2.5123616010434	0	1.37893164130526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129840137-2	8.70422852907451	1.56087327786417	0.534886958335717	2.91813672690914	0.00352129910350238	0.0498813811440421	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25204851015237	4.02529923499795
Merged-chr4-46585235-1	6.38224261259247	4.83324669146187	0.967712150154375	4.99450863636552	5.89857521371776e-07	5.30190228219533e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	4.07566324591474
Merged-chrUn_JH584304-67155-1	2.00998059333769	0	2.43325272550278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6481618-2	3.16633651399031	0	1.36853219003146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70396454-1	3.10668663511895	0	1.34645534774913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64961600-2	9.0543171070915	0.774579634326164	0.560003632746994	1.38316894575595	0.16661306926655	0.89251295644521	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78555621750889	3.9200336988247
Merged-chr14-70962124-2	11.226022392323	-0.551489851253491	0.441032102845627	-1.25045285296732	0.211134167791072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25670504178509	3.67600721765121
Merged-chr5-139398544-4	5.72333946884976	0	1.30478786175163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64016689-3	5.19357252430557	0	1.30634891355798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94720650-3	5.46128955983827	0	1.31815640608621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160353922-6	18.8291476893804	0.794082027156995	0.461981564872048	1.71886085406227	0.0856397115927003	0.551677109004002	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06649489650332	4.02530274691746
Merged-chr7-90060093-3	4.40996455580707	0	1.32161836324209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-179948963-2	3.87269180539612	0	1.3353079054612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39779409-2	4.00140639970793	0	1.33452251636611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91088022-4	7.43630368231012	-1.66429261711889	0.911489447907184	-1.82590442592635	0.0678646594128795	0.464789825215955	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06082926854643	0.994591904006138
Merged-chr5-107936812-1	4.29308892245586	0.821559548399477	0.969894209281251	0.847060989268408	0.396961127713788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26081546353945	1.45575152610536
Merged-chr15-27647948-1	2.80232716839519	0	1.33694805891333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60437876-3	4.23022366213916	0	1.32249109410909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25214494-2	22.9357762813296	-0.34188265880915	0.450948427685004	-0.758141370099114	0.448366355651065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97100917854365	3.67871683593548
Merged-chr1-173456549-3	5.64418437741859	3.61723174500589	1.06179819225843	3.40670361974539	0.000657524845174994	0.0136166838717133	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.36759862365701
Merged-chr1-9593952-2	4.59217453544542	0	1.33608328286457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58655474-4	9.63143584943465	0.245871131469366	0.595544232665953	0.412851167022009	0.679715660805219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26778366217774	2.19034116109929
Merged-chr8-68553467-3	8.22561473290185	-2.18988138944459	0.632941779065664	-3.45984648489669	0.00054048342756522	0.011679375019073	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45632865744156	1.628416560482
Merged-chr3-138012599-7	18.4251089012331	0.935711782011237	0.40856634899962	2.29023213561846	0.0220078634808131	0.201983967277699	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27510426296415	4.47473348894548
Merged-chr15-84072363-2	4.67844998871399	0	1.32244894159181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68008330-1	4.99579800322909	-3.4131753449445	1.08137611291021	-3.15632581873751	0.00159770280283836	0.0272167589557549	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97115619659683	0.733321818366247
Merged-chr19-4207173-4	4.57753119726835	0	1.31107210453027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44469775-7	17.529668619426	-1.92906379589251	0.533282741666627	-3.6173377556974	0.000297648788925955	0.00742939563069346	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38901452056621	2.04450729412695
Merged-chr9-47661857-2	11.8347063575611	1.2159324121041	0.572982148065375	2.12211220927143	0.0338283163651501	0.280419277076887	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18249946292808	3.6588783116192
Merged-chr6-129499729-6	17.6788749854402	0.655371365083878	0.36979902570544	1.7722365921156	0.0763552917871149	0.507683444965487	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63624600182697	5.26416507406377
Merged-chr2-158413482-3	5.48956995857089	0	1.30912505053982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5134301-3	4.57360747171854	0	1.38619385390863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20412161-3	5.63765717312682	0	1.31397869888033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159835455-3	6.90508593456703	-2.14732809737788	0.708960915532703	-3.02883847378866	0.00245495902339954	0.0380323354248388	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69030709673169	1.26501898168246
Merged-chr6-54057165-4	7.37407702860451	0	1.30339033376394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102233079-4	8.14686653985731	-1.89746195213322	1.08766675934086	-1.74452509083122	0.0810675701590989	0.530115224618881	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88283636365487	0.469435083901436
Merged-chr17-28967304-2	4.53355749010112	0	1.31801497431553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64370535-8	21.1093414516729	-0.190504767985172	0.323663709411585	-0.588588595031263	0.556137286434662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40329408853199	4.23357632821956
Merged-chr8-41298537-3	8.83239714210811	-0.127965333320074	0.668166175560507	-0.191517227301617	0.848120384903669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09189560214245	1.89200393807192
Merged-chr9-14075182-1	2.21161519057967	0	1.39991882445203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87658588-1	6.56390586431158	-0.0252572756014511	0.725380146823923	-0.0348193643181993	0.972223779500259	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31722328046103	2.62235589016187
Merged-chr7-123203830-1	2.68171771848815	0	1.38383286695951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135815493-2	4.78161277578842	0	1.44380521571165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36573386-1	1.78770972620557	0	1.49085259022701	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30494466-1	2.85074553343684	0	1.37436375306501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129894643-1	1.24574390499003	-3.96762733222988	1.43830019543707	-2.75855300918192	0.00580578881042877	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52305229319519	0
Merged-chr4-109657361-4	9.19655991953796	1.92227641580157	1.26309454123773	1.52187849210233	0.128039529242468	0.742185705174224	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr5-121900732-1	2.24031896494798	0	1.35834750099418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122854361-2	2.64150194525883	0	1.38283550443009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106063221-2	4.84039230284686	0	1.30909983081137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21040680-1	2.35534196330041	0	1.35777578672634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16507257-1	2.93966324798242	0	1.40328949878972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39455579-1	2.40897282248216	0	1.40358823718134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12574509-1	1.67566806291831	0	1.50384133406437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44164825-1	2.1286869576128	0	1.38671766769021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56054004-2	3.92020227239663	0	1.40769731558845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-139413515-1	2.56809031438197	0	1.41306352654469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86959777-1	2.87028811704639	0.202101039199827	0.843389302684305	0.239629597573253	0.810617417631249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8697028492305	1.84786608550645
Merged-chr8-77422737-2	3.32452924809208	0	1.32319670619043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79160181-1	3.622875356158	-0.923108118642336	1.00998345045929	-0.913983410542574	0.360725562791864	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46049670954343	0.918668513615376
Merged-chr17-56858364-1	1.80093030149672	0	1.3948082458914	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128738949-1	5.48099892990765	-0.606685099223103	0.845263623468258	-0.717746608725184	0.47291353918339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03040617182189	0.905469781553611
Merged-chr11-20149786-2	2.21928681056777	0	1.42997307426781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131083096-3	5.24673622942356	-1.8771769283121	1.07209912005417	-1.75093598455453	0.0799569374765997	0.52484842153148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86990514791128	0.469435083901436
Merged-chr12-119215390-2	2.43496723169066	0	1.48774926172938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63817291-1	1.65071960314091	0	1.73002166954211	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149679994-1	1.84198265408858	0	1.42071969057802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53739365-1	1.70155457523307	0	1.5199775358237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55231959-1	1.71251975173256	0	1.4786160792611	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130805951-2	4.35271181338248	0	1.33981083900753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50504775-2	1.80083374961105	0	2.08457508472483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75561259-1	2.34639835356893	1.58158424666572	1.4616315213253	1.08206769188424	0.279222450478259	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789210977348248	2.51813409520205
Merged-chr11-59578400-1	2.59425331040231	0	1.34437023246576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87524969-2	4.91142556057099	0	1.43017763829154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143038256-4	12.5573785841547	0	1.28354274625499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19430356-1	2.95951914018951	-0.907906511333839	1.28634087995222	-0.705805533730347	0.480309080288948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19335182930173	0.683637474991079
Merged-chr8-106411726-1	2.19603457051402	0	1.41141389641467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141184204-1	1.54313534461138	0	1.81667159055623	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18821186-1	2.50920093889583	0	1.37866788693648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45582964-2	8.06066792398416	-0.125618462264727	0.762025222848333	-0.164848168404695	0.869063489737752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50127563184523	2.80583195855415
Merged-chr18-77758560-2	3.82599412178423	0	1.38217100078752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-25358269-1	1.4255782328828	0	1.60071933870596	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106229803-2	6.19290027372121	-4.25878762491225	1.07399096068983	-3.96538498068624	7.32775811009387e-05	0.0024810346189751	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12469605598612	0
Merged-chr16-32918265-2	2.46098367197438	0	1.48876066609561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116446167-3	5.25361422117534	0	1.29378470925384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5130288-4	10.1152295369432	0	1.30247076583435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125344146-4	10.8379319260439	-2.18286348141489	0.618398367209544	-3.52986617876245	0.000415769908065634	0.00956988390717046	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50312655056891	2.21312207999876
Merged-chr5-114702766-4	7.2397518675684	0	1.30650966827441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99230550-3	7.83613339000832	-3.29811294949022	0.939180872267053	-3.51169092863766	0.00044526549765267	0.0100853792754285	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32773154664135	0.581381506691384
Merged-chr16-36621289-2	5.06035491223245	0	1.32872646859753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99220529-2	4.6410732360319	0	1.32778546443846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31394242-4	8.54847083559183	0	1.29863870832054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84293707-3	5.31183220626869	0	1.29605805545172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110384715-3	8.38076825303866	0.804607813842392	0.783525851358467	1.02690653084052	0.304464478782597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30858184754562	2.08703878056993
Merged-chr11-94198974-2	6.62071407378125	1.57783686652626	0.894435945820565	1.76405797854953	0.0777222183129649	0.51465175423889	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2068789071614	1.47209300585678
Merged-chr5-102019690-2	9.57470826514893	-2.07224647640105	0.91532283578078	-2.26395146651553	0.0235770999862716	0.213064469050325	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87134771214062	0.733321818366247
Merged-chr3-97202112-3	4.51626392197651	0	1.31372436282187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87230677-3	5.29171150126939	0	1.30391757456573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25537905-4	13.7597959833135	0.302722482289649	0.590555721806286	0.512606128620235	0.608226865308237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82232316000193	2.94690055182349
Merged-chr18-30087459-6	18.778662482057	0.337350944107002	0.441097708936001	0.764798676739326	0.444391435867945	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74490518242583	4.13218557341333
Merged-chr2-127378968-1	7.38088457757497	0.584647220588534	0.648496459934792	0.901542655525556	0.367299864896462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64259556374772	2.47297379083555
Merged-chr4-141652512-6	20.3156490176739	-0.622637252104516	0.437607188353961	-1.42282226772037	0.154787684466785	0.848482176760885	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09664632944334	2.9580951787751
Merged-chr17-26661939-4	7.01268445211641	0	1.2990738760607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122298785-3	6.85843011266074	0	1.32578632914274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79840889-1	3.32786322779155	0	1.31896418179101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10846702-4	4.66704627109037	0	1.33633590053056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6679919-4	5.71114502301539	0	1.31226451884813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13685009-2	5.69449369579247	-2.3241687169974	0.851759240612669	-2.72866862627241	0.00635905689759235	0.0783444441987311	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66757097477141	1.26501898168246
Merged-chr13-93749873-4	9.21730987088319	-6.08306053413535	1.01477703710227	-5.9944798825028	2.04137733638952e-09	4.6318001188788e-07	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76894335662038	0
Merged-chr8-123110837-6	15.9154127102534	0.871450294915428	0.507595835682964	1.7168192361998	0.0860122051039579	0.553585497362674	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62307333045341	4.01442254358258
Merged-chr7-80440958-3	5.51937404319866	0.431399291006168	0.896600667346337	0.481149866063537	0.630409989232497	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07093521121123	1.08764913775046
Merged-chr15-80704487-4	4.63645967445446	0	1.32099539479309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116139065-2	7.78488262006882	0.0260039279838783	0.821030246131841	0.0316723142739161	0.9747333738148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86794286199599	0.905469781553611
Merged-chr14-70096386-5	6.8065029932062	0	1.3244765681652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41154936-1	2.05419927344634	0	1.3984767949279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15746101-1	2.8890449867781	0	1.37288662637212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145111834-1	2.05960164040641	0	1.43678915095043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102721376-3	5.85527100683386	0	1.32270996157361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99546334-3	12.4543504570264	0.584504780197471	0.644074199039685	0.907511558557955	0.364136339942704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75809332146702	2.18911587802649
Merged-chr17-72908998-2	4.76356178853484	0.710131315397007	0.928082876735693	0.76515937660085	0.444176646386261	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.970635354461015	1.07982873328226
Merged-chr4-110022434-2	7.41386239861035	-1.84426296278536	0.76002121798016	-2.42659404652767	0.0152412994643187	0.151499536780555	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6300487495935	1.93653890829635
Merged-chr17-28709967-5	9.4719862359863	0	1.29022341654012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77837896-2	3.62524569486846	0	1.31462116210247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95612362-3	5.49775634904998	0	1.3007444276945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108742243-5	11.2899539318248	-1.35850576177607	0.762378293765525	-1.78193132318362	0.0747604317979954	0.499979037587945	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85570108390338	1.46981335012887
Merged-chr8-82917654-2	9.64889111309042	-0.559340502930886	0.520169782084389	-1.07530372235299	0.282238770215688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34960776899795	3.1976040549979
Merged-chr1-178463893-4	6.97392159670456	0	1.30524404074813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33916763-3	5.84948023382581	0	1.29733599833443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67473366-4	6.03311182617121	0	1.31614817709805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91182654-5	7.66935692981843	0	1.30719643893104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145675491-1	3.40547051922146	0	1.36303967527155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36188914-2	7.2917051388245	-1.53601124242737	0.639578568550119	-2.40159898714148	0.0163235919898932	0.159850358485173	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99311670691153	2.68840980050205
Merged-chr12-98383366-2	3.65434303904628	0	1.32502856070389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154755982-2	6.41145167525699	-0.50740217788882	0.831502811856194	-0.610223045134541	0.541714065972332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18575616639134	2.41081216695128
Merged-chr15-98476526-1	4.82493354753073	0	1.36332018206741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14650935-1	2.20944883404981	0	1.41701710145873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106566644-2	5.82597503509002	0.138416105370182	0.694285572079602	0.19936480165587	0.841977391988457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07725480552101	2.43795785835186
Merged-chr5-139746017-2	3.35620560666704	0	1.33571544162101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66851217-2	6.13316680009332	0	1.30489631259089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111325355-2	5.26991038801001	0	1.30781299375531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-4840300-2	3.47704327207429	0	1.31781201065354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132783619-2	3.09502868965187	0	1.38847200953529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52256087-1	3.42096303949721	0	1.32398302718584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58996626-4	10.8358573584314	1.18801752037497	0.528561564080731	2.24764266096638	0.0245989849660627	0.219926839730788	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24395286403332	3.7266942667982
Merged-chr9-30423150-2	3.53781290234911	0	1.354628141614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23225187-1	2.77779249775013	-2.56130972243672	1.22365249079455	-2.09316757960717	0.0363341977371019	0.294504401554039	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58227521047201	0
Merged-chr6-43642551-2	4.7294417595099	0	1.31340763154955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152015768-2	4.54403119833963	0	1.30846928799111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91848627-2	4.73485832760181	0	1.31468884102951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45585045-1	2.68452732147019	0	1.38807490628537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55665369-5	17.585317745382	-0.551420949008912	0.470913648912427	-1.17095979333455	0.241614938855383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83938683106915	4.20065085044376
Merged-chr19-8993073-6	19.8283105429248	-0.680491338981905	0.393505082729562	-1.72930762230986	0.0837540531649491	0.542847883169685	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63928438087598	3.97662535218868
Merged-chr10-80340386-5	11.0042961021973	0	1.2865820596725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82797070-6	16.3402195464164	-1.50638145349661	0.458277751247914	-3.2870490644476	0.00101243192341625	0.0191874641727258	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45161393382809	2.8919050357779
Merged-chr19-32665462-4	6.11040280476801	0	1.30770432187874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27662918-4	6.87687106050596	0	1.3101023491968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-9008353-3	5.5171528962305	0	1.31330801340758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118080185-3	10.9864880748864	0.336946854924511	0.487478905377169	0.691202944799859	0.489438013545173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96890220147654	4.32665360460964
Merged-chr19-45651706-2	3.9400059387743	0	1.33451136593766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64126137-6	15.5612128157293	0.706902918662476	0.467747247316277	1.51129252543626	0.130713937488308	0.75323041967469	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18423418457936	3.85111992499388
Merged-chr7-99539540-4	10.0804877268752	0	1.28572838592674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81518853-4	4.85712786378313	0	1.32372527154311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55751710-3	7.20767397000778	-0.233567912548047	0.531250427326253	-0.439656893498568	0.660185627740115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14560612905924	2.93807335876715
Merged-chr17-64751377-4	6.83812869536254	0	1.31956543643222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83742969-1	3.42464402165284	0	1.31812676398562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64178664-1	2.38879271790037	0	1.35889909937362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-109509212-3	7.64335536838562	0	1.29164835754389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112258770-1	4.91498056254138	0.278441427234184	0.786891496676375	0.353849836235679	0.723451422669648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91188875465621	3.0809096629604
Merged-chr16-49278682-3	3.56952885523927	0	1.35304587334252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46627527-1	2.23015489995509	0	1.4032370154924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30357967-3	3.51927901999209	0	1.35623780694014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102640204-1	3.83050864369272	1.81886933265419	1.26470183273233	1.4381803564913	0.150382887267774	0.830327008990282	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.581381506691384
Merged-chr15-75791345-1	3.39323203285727	0	1.40636150930217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171011874-3	5.18666140944265	0	1.31208396483389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87028959-3	8.61858925397246	2.29950819857767	0.676253001193399	3.40036671855012	0.000672955339306608	0.013867845979921	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.872260231715655	2.69916234073872
Merged-chr16-45763883-2	5.19321968144863	-2.41659954009437	0.95197507103315	-2.53851136823542	0.0111325186015853	0.120330371893059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24885884720457	0.666688015277142
Merged-chr17-71873039-2	6.81005316390257	1.04812834843747	0.734961713118335	1.42609925079011	0.153839695026948	0.844702857846482	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39768486482472	3.54421640168847
Merged-chr2-45099220-4	6.61215897087266	0	1.38260522758243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45574011-2	4.41064759002077	0	1.32893367798293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61612748-1	5.80710236632112	2.33620905339858	0.696917859588714	3.35220144132523	0.000801716613086087	0.0160093953059968	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19797960074576	3.49633535099465
Merged-chr8-86828202-1	4.35353514977198	0.228048654662379	0.581539538786387	0.39214643107207	0.694950022306725	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35473568977408	3.61002370573513
Merged-chr8-116951088-4	5.22362053212435	0	1.30759229755915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79971482-2	3.3964610245852	0	1.41559325808741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32323950-3	11.8438689037011	1.08967453634489	0.51999194346852	2.09556042171807	0.0361212032511611	0.293506111371596	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73607414586559	3.84465541889156
Merged-chr7-6937278-1	3.68499876483484	0	1.33952909771492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98193786-2	5.88198296192603	0	1.31179238799744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43118976-4	13.1914164250534	-1.49220684456966	0.664873509392344	-2.24434696749078	0.0248100858226926	0.221511117388943	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4677519785976	3.28439392801156
Merged-chr9-64091343-3	6.20955525828892	0	1.31413896865829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23535863-1	3.80615807189443	-2.12529172624476	1.17186584983044	-1.81359643388556	0.06973987987893	0.474068676850989	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31454146917439	0
Merged-chr9-37246357-4	6.54001175501698	0	1.30160843660041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120510151-4	6.57710658730023	0	1.29295296652945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44233113-3	10.4500057437666	0	1.29860805614793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164083830-2	4.25761405154238	0	1.32474399778675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118703347-4	13.9490438499076	0.0480689945382524	0.603144443807149	0.0796973180003663	0.936477992595591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91734021075291	3.24880038725541
Merged-chr2-35327487-2	4.485964582757	0	1.35112733100266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145244465-4	7.47388301668527	1.3168443685792	1.05714470764373	1.24566141140159	0.212888726184389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	1.03956264035389
Merged-chr14-25855513-4	9.33801952995165	2.25683756349971	1.06693901514458	2.11524513722453	0.0344090597276632	0.283576677164432	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.26501898168246
Merged-chr17-64894932-1	1.84743863758331	0	1.4543046226393	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26476251-1	2.73043395043573	0	1.36847892447037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99218586-2	4.32164005146233	0	1.33062229962013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33883255-1	2.69535567553772	0	1.42603709989017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45883434-1	1.87183172873753	0	1.43899622029189	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58585542-3	3.75058471330898	0	1.34093484259536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-57310583-3	3.56299177764248	0	1.33442273861575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101119626-2	5.2623498305042	0.769371159389695	1.32198802967796	0.581980428050558	0.560579864160204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.306240821987646
Merged-chr10-121961648-1	1.86834261547624	0	1.5134337457306	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95047244-2	7.72150964812735	0.940414892667531	1.14423401060322	0.821872872116223	0.411149253922072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	0.683637474991079
Merged-chr5-139284789-3	4.13025248748988	0	1.31738816153327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21037232-2	5.3488206223081	0	1.31581102476828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122864010-2	2.58855327385917	0	1.37288670209225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48350421-2	4.23641341313501	0	1.3590998551013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72854765-2	4.87987137164996	0	1.35363827577857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134577838-1	2.28795179744094	0	1.36728094317406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60748132-1	1.8649398915125	0	1.59543042383718	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115640839-1	3.88756346988311	0	1.32275384243452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107130841-1	2.32238144845766	0	1.36199190708353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24718563-2	5.93308804585332	1.30063307285664	0.661563593077627	1.96599856229396	0.049298776685632	0.366910918143429	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79071235200342	4.13962876939035
Merged-chr9-103272189-1	2.015594026503	0	1.42099454539128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87750148-2	8.0391399880011	1.18569277222432	0.769219734986703	1.5414227148564	0.123213939207397	0.723083796268212	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46316891124606	2.27643187026249
Merged-chr8-40304921-2	6.32176693207866	-1.53149539813866	0.767630392823412	-1.99509479100441	0.0460325423844798	0.348839442729469	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27553386487549	1.428339764855
Merged-chr14-27096504-2	4.80114459303275	0.946062275939759	0.898451365093974	1.05299219601142	0.292344568788161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.973873180804663	1.57612722179308
Merged-chr18-4335777-2	3.07738858634056	0	1.39033274617557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91165222-2	3.1833523702496	0	1.3442188663769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41932497-3	3.30151652515575	0	1.31909421170453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-141874091-1	0.918843203902558	0	2.21897466348469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8424403-7	13.9231693538959	-1.15572402361084	0.518253077968199	-2.23003793463578	0.0257449245851437	0.227618433492193	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26084209027434	2.67883239311636
Merged-chr1-152573875-4	6.57477987726976	0	1.29644114560055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91082590-5	16.0675585406633	-0.267253122952371	0.456309315451213	-0.585684126759724	0.558087802913365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69913048304395	4.08475550381779
Merged-chr7-133046756-2	3.50880198007732	0	1.37976009227184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31981072-3	4.78919901307756	-1.52333255270631	0.749330243798748	-2.03292548954616	0.0420600513781088	0.327470048534958	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34184162895356	1.84001395625789
Merged-chr4-59837933-3	8.39754874234754	0.908191294022828	0.58976935723214	1.53990925924853	0.123582473487689	0.724270880047222	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13159504557327	3.01797631141003
Merged-chr9-106343561-2	6.05656406863467	-0.0602032837161185	0.537959209760654	-0.11191049920477	0.910894371739713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53083998561621	3.46443333361485
Merged-chr8-82459207-2	3.42440396408915	0	1.37549619427315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-99001186-2	3.71370817043359	-2.75196286010486	1.1236236810298	-2.4491855294316	0.0143179676114497	0.144810696724623	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60120233745533	0.61242769162773
Merged-chr2-144217443-4	5.20622377268653	0	1.29927722127946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6411192-3	4.98168928739074	1.29877441959429	1.33759735976778	0.970975615427185	0.331560421550882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr4-148657814-7	16.4777813630533	0.914014854393044	0.460822037782068	1.98344432222076	0.0473178204720041	0.356388923070952	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63273952039007	4.1817929834363
Merged-chr11-99447278-4	7.35767267791044	0	1.30432325997896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125123449-4	6.50121746386522	0	1.320380397016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67133869-3	6.53441867579035	0	1.3477681546444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170507926-3	5.08811621775217	0	1.29649097073305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88799484-3	5.64237325868963	0	1.31312027799279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11997463-2	3.99047705043885	0	1.33299274701344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64204259-4	7.25243190639578	0	1.33299995201196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44345558-1	2.64442948880098	0	1.37752606326794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53873847-4	5.51722836025393	0	1.33086122953079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58180929-4	6.50171045705115	0	1.34744607126195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117479958-2	4.66511134317289	0	1.30103397230394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19316342-4	5.10408117278598	0	1.33465234733459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117066871-1	2.65844086417574	0	1.33840988112207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43283366-2	3.62972162643717	0	1.33792660837039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52988076-3	4.30460352588742	0	1.3108540777737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5509465-7	17.9745186606481	0.202779280681923	0.448604195581273	0.452022702148771	0.651252627809685	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04315155975625	4.14552405258537
Merged-chr9-100434586-3	4.33996966188608	0	1.35831460337588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159757373-2	5.88622271872626	0.699781043211308	0.93712818419183	0.7467292682215	0.455226998855343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.942222610012176	1.29358708977899
Merged-chr8-70844703-3	6.78273199585974	3.65311990533682	1.06585574175939	3.42740556926275	0.000609378203603351	0.0128204855417465	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.56104072393284
Merged-chr14-76991907-3	8.01416223190095	-1.75834431702885	0.811153232890965	-2.16770918949811	0.0301808198487852	0.257769684203205	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05964974752289	1.20275690226768
Merged-chr11-59624471-1	3.28739118025381	0	1.3160459473358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24449284-4	10.3277080243463	-2.69229532365677	1.08332819295502	-2.48520747559698	0.0129475949394096	0.134596490440767	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61912783640694	0.609949614787909
Merged-chr2-3349129-3	3.77097007900771	0	1.31616691298161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11630225-1	3.44557996475865	0	1.34483261118709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-47934698-1	3.76220357949556	0	1.32728330314196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112058294-2	3.47897241896527	0	1.3297766895088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108980868-2	3.53772642446638	0	1.32647133833138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63625018-3	5.81190270993154	0	1.30946520068229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88214012-4	9.26546177772187	-5.00632960601439	1.07402347780996	-4.6612850737889	3.14241109335123e-06	0.000200923674467837	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29951303120351	0
Merged-chr13-81051771-3	6.66162016010434	0	1.29635463630613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71882683-4	11.7923475932913	-0.704828647272124	1.08751084795522	-0.64811183134161	0.51691262221241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17874192672722	0.727201944460961
Merged-chr19-16142618-4	5.47623728410114	0	1.3094497322874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104420833-1	4.32124248647967	-4.41804110887797	1.12839034509717	-3.91534820204218	9.02738279288167e-05	0.00291454227264647	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80458827993847	0.306240821987646
Merged-chr7-75684715-3	3.0370665917883	-0.91490279254373	1.24004374527179	-0.737798804302022	0.460636720013518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	0.306240821987646
Merged-chr6-125149409-1	2.16964021660447	0	1.40508685741077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105051627-2	2.92863918373938	0	1.36798944238505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88379054-2	4.97567326273829	0	1.34825893093137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3400147-1	3.1430996330742	0	1.40683422371485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47690744-4	7.36272812189335	0	1.31245491414702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44895444-2	6.81709631329626	-0.872378286519761	0.641249367659316	-1.36043531661343	0.173692208908477	0.920974609163691	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49947483013337	2.36173837884825
Merged-chr9-56258611-4	4.59847486151397	0	1.32723161365442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11743748-1	2.99277834697763	0	1.37734185072878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40963124-2	3.68485435783424	0	1.37220692283294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129380003-2	12.2828211904019	1.90460560296885	0.608364453900718	3.13069836798794	0.00174391177091493	0.0291750277988242	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11171155464926	4.73535764563735
Merged-chr19-50920234-2	4.84756176110762	3.1556251037557	1.2263940555866	2.57309230208746	0.0100794322481961	0.11165461598417	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	2.69810662458968
Merged-chr11-62921215-2	2.86075896272359	0	1.3754572284675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91377027-8	16.9728926554556	0.0306851856424775	0.461829086767396	0.0664427307020884	0.947025351162479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93601354758872	3.91040974120305
Merged-chr10-20673939-3	7.08483551985165	0	1.30808854471205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38709765-2	5.74630779152062	0	1.33584246867884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16038046-5	14.154188570145	0.170458449078429	0.480793866427514	0.354535406919813	0.722937674074873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38799829576615	4.1899736634197
Merged-chr9-26783601-3	5.27159232370618	0	1.31872946867059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45745836-4	8.74459441759505	-1.87753346582585	0.908130846190309	-2.06747020399348	0.0386898690104696	0.308470983450238	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17838753059954	0.733321818366247
Merged-chr7-113556392-2	3.99734556454003	0	1.32703170691885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23088670-2	4.23141842409996	0	1.32967835123279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145328996-4	13.3780432988951	-1.76434587425287	0.526744170143367	-3.34953089992938	0.000809485261041051	0.016141783298135	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82059089392339	2.37497176722538
Merged-chr1-87829779-1	2.87745666100395	0	1.36437216388843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117842533-3	4.95851455551101	0	1.31524835362838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36966989-3	4.37789152055495	0	1.40518491931472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35156917-4	4.85741795280181	0	1.34706715572318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66342577-4	11.6726993750184	1.61074057737809	0.500315430037752	3.2194501322027	0.00128436697746953	0.0230825754977238	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14171937376088	4.90415307382244
Merged-chr2-113648351-8	16.7414260202158	0.0464980636963343	0.450448884844283	0.103226060183074	0.917783557353989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39110192033261	4.18678893689925
Merged-chr3-126621468-5	20.4783008760484	-0.39075790517767	0.409624146829179	-0.953942554906616	0.3401127211298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96620332332122	3.70953046430998
Merged-chr13-120259878-2	7.11038469330661	0	1.33247562616636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82961530-2	8.4372627948459	-0.417033172308162	0.542474196693805	-0.768761306712535	0.442035022887164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77451060691482	2.74298175707422
Merged-chr4-145239466-2	4.66784230754131	0	1.31640764324301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60739820-2	4.92888497523599	0	1.32167633593796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45019070-2	8.72537286929846	-2.29180598046569	0.518816469004571	-4.41737322807596	9.99076313877874e-06	0.000506090238811345	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87199504520638	2.31260716574699
Merged-chr3-55153128-1	2.9640199156799	0	1.31316794586866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67157108-1	2.83880889951197	0	1.34603383870831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9883221-4	5.84524256833751	0	1.30151688203554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113669860-1	1.92863313837731	0	1.37765234742016	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26601067-1	5.2748619703623	-0.651564454454248	0.891246088889422	-0.731071319781229	0.464735591347023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20507388868379	1.72583980988184
Merged-chr14-63145613-3	4.68023591173367	0	1.308289296266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108576902-1	3.73557706551265	1.34820159414527	0.988921468151936	1.3633050121409	0.172786403063937	0.9175863709562	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4356481405478	2.86944151270285
Merged-chr1-156538002-6	12.2232618213334	-0.46427093909257	0.60049615489101	-0.773145565231529	0.439436237339319	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71248497774589	2.28704604081273
Merged-chr4-150176713-7	18.6590527392644	0.166666218215125	0.346302913681267	0.481272930809132	0.630322533124404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60277217893831	4.8217916103542
Merged-chr3-93375419-1	1.81029524452648	0	1.43129719142663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131345596-1	2.5765718140873	0	1.39052342057308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99488971-2	3.48902839886564	0	1.31499919746944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118470476-2	4.59919415922151	-2.16217859970198	0.859601648684882	-2.51532625956445	0.011892227550954	0.126462083245669	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60935168601563	1.11779166918352
Merged-chr7-83062164-3	15.3476474904646	1.26108286038929	0.431515508189418	2.92245084233619	0.00347288437022323	0.0494114140415288	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54068119365936	4.86310819900297
Merged-chr1-161295716-6	12.679527749111	-0.149396266072555	0.61650626328745	-0.242327247862684	0.808526602107597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17854045451328	3.07182627294176
Merged-chr5-110815638-4	12.4346854908369	0.156504631055353	0.587860762151386	0.266227380923665	0.790064096792022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93092388686811	3.19029452642185
Merged-chr9-46066897-3	6.42173549735627	0	1.35269013475841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56076065-4	5.5641014132536	0	1.31034480651632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32303888-1	4.76786909266253	1.11317746767066	0.749628128325737	1.48497291604692	0.13755099878321	0.779969600645874	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34556847501764	2.32843128278891
Merged-chr18-26015312-4	9.24775988607984	0	1.29817295725373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-26445173-6	18.3067718911343	0.578621286972452	0.44158923679418	1.31031564802867	0.190089075982994	0.982174488747113	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49604190554066	4.91076287391118
Merged-chr18-39354155-2	5.39783377455685	-3.23108290477065	0.996561029047414	-3.24223284936113	0.00118597080586334	0.0216598949792256	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64585533500452	0.581381506691384
Merged-chr12-95738347-2	3.401778731252	0	1.34351781620515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8161960-2	3.40600323303578	0	1.33712917459285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65742259-10	40.1070614094555	1.09968791304621	0.312851625442113	3.51504618680552	0.000439677513229547	0.00998303223749062	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41776258978859	6.59476909131788
Merged-chr15-58882503-2	4.98620891357527	0	1.30644954899518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41367067-2	6.22934608663096	-0.319721114034171	0.730199436248713	-0.437854506813493	0.661491755666166	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48908268120152	2.30670691456252
Merged-chr2-26055276-2	3.57248759010004	0	1.32116071747684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12626271-4	6.59241707746798	0	1.30029790920085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145765185-4	17.5053182321431	2.26956488906415	0.597089244929416	3.80104801474434	0.000144085375471312	0.00422784146634411	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0543831818492	4.49071432843917
Merged-chr2-148073345-3	7.44218860495326	0.304217594485159	0.744973760388346	0.408360147244078	0.683009287326537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87683826260352	1.9071925850333
Merged-chr10-25443794-3	6.06843550994687	0	1.331113576242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155373468-5	12.7702109299333	0.740190576416263	0.370721809248992	1.99661999361662	0.0458664792387499	0.347944155135286	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94435395158836	4.61534328059308
Merged-chr12-3264607-4	6.6779627594928	0	1.30078287789707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133346636-3	14.2398995157325	1.20084151779298	0.735360493617771	1.63299705139879	0.102469616813255	0.633129687999148	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31576970382891	2.91285904552105
Merged-chr17-34924530-5	17.0466126562962	0	1.28762741696581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4469825-1	3.21387692670926	0	1.34528556757995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27697310-1	3.13120264000503	0	1.42514689659216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43040222-1	2.63824662229594	0	1.38537816210663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193799202-1	2.31850605709056	0	1.42607121606478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51790271-1	1.96966872065102	0	1.39115413339944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63099827-2	2.52082556020784	0	2.08541092214233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122114420-1	2.73869178781478	0	1.32303012793528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115071115-1	2.27896342967544	0	1.38691964565952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100950034-1	1.26737642078775	0	1.54243781357271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106030538-4	6.28400661047012	0	1.31990822506365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51333090-2	3.48180514272239	0	1.40289297254909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63548706-2	3.86420567432119	0	1.33390530194511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75075539-1	2.73967758041912	0	1.34940469594771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189659969-1	1.20521962741427	0	1.64446173832006	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71811767-3	7.02816236178982	0	1.30829825250973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131895277-2	4.69579352929177	-0.423390630506923	1.03037419556723	-0.410909582487986	0.681138835682858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19904754646132	0.733321818366247
Merged-chr6-84737140-3	3.81253704618009	0	1.34649186905281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51936312-1	2.64442247393087	0	1.39138052486349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52526098-2	2.17942022799731	0	1.39400234420698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123053390-3	5.03685902038786	0	1.37972930217666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103029881-1	1.88393024314189	0	1.5379718410488	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98789382-1	4.5787736307331	0	1.3284046812494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57431446-1	2.19309738004574	0	1.36109326619079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3766053-1	3.56941505108832	-0.965882675512599	0.789530337175647	-1.22336359989384	0.221192395258892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83980470354098	1.88903407179563
Merged-chr2-118892428-4	8.06878675438278	-1.4672854751623	0.681654375006818	-2.15253584361962	0.0313551753649702	0.265234341669818	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20394610168509	1.76628008406346
Merged-chr2-128055136-2	3.32062867936336	0	1.34013316552561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10558890-3	5.83939036084188	0	1.34280415924957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122233832-1	2.36397696943261	0	1.37719135032708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44759861-3	10.4612514054359	0.160368318601106	0.626507438044841	0.255971930838638	0.797972511366189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81677268361646	2.9868467483527
Merged-chr7-99887484-3	5.12175570282349	0	1.32028185451246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121409826-1	2.29368016479233	0	1.38247996485162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136975707-1	2.77268518563143	1.79482569875084	1.24537651310573	1.44119122198226	0.149530667598313	0.827629034479219	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	1.03956264035389
Merged-chr10-19691470-1	2.8368073730134	0	1.32516905142819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125380941-1	2.69080630892921	0	1.65769603183254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75637219-1	1.70022416288956	0	1.47231500899023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104401662-3	7.65649716574363	-4.68199893372481	1.09877462901647	-4.26110943052602	2.0341459504215e-05	0.000890906845015035	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62622536684435	0
Merged-chr11-106673672-4	5.33123762054493	0	1.29515648459709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80497899-3	11.6766858631976	1.54821777821865	0.545297270223031	2.83921791426798	0.00452242609481633	0.0602001335489647	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37581646307845	4.63836288260326
Merged-chr15-53255986-4	5.22708189639788	0	1.3011363735771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31662170-4	4.38886820653194	0	1.30568445666455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12783023-3	4.88308411323756	0	1.31165182512114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73685425-3	7.31668787035554	0	1.33616663955729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16107904-3	9.04827833649401	-1.12412729168692	0.599226587596233	-1.87596364206118	0.0606602725479574	0.427112984392432	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44143576648581	2.16286647593625
Merged-chr6-146668982-4	16.2841686481819	-0.250763462303325	0.355392774510909	-0.705595274547787	0.480439863763359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.895475721573	4.67473006682429
Merged-chr15-34456321-2	4.36939107711553	0	1.33400966632675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95349182-2	8.53908566468143	1.7931562662997	0.824475542444632	2.17490534768667	0.0296372101017771	0.254056556645773	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58475414817805	2.83466705965869
Merged-chr17-47515703-2	4.23941535101205	0	1.31856056379296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42820164-3	4.08111043881659	0	1.31234021483833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59584990-3	4.33242885428377	0	1.34155637265622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-18558927-6	14.791631159007	0.900863453410245	0.569424298148661	1.58206008478945	0.113635854586418	0.682316323973542	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35668135573551	3.47218699191149
Merged-chr1-156624396-6	20.9309874473363	0.310943233652814	0.397846576240512	0.781565689445164	0.434469857495533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1913291501572	4.41841015103432
Merged-chr15-67124908-6	19.068948260632	-0.13156226202534	0.36097289963936	-0.364465759498237	0.715510238022742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28586954648592	4.02048168841453
Merged-chr2-119993462-7	20.1505253497314	-1.36891660249318	0.416410712651224	-3.28741927357607	0.00101110173244352	0.0191777983904471	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.44066698335056	4.20008569793247
Merged-chr3-104501849-3	8.65565113262805	0.0535827816553444	0.650450688536114	0.0823779305637086	0.934346185251129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12126767463489	2.73916616373922
Merged-chr19-12830212-3	8.65771861751622	-2.25629209528685	0.541375251489181	-4.16770454334657	3.07682381959627e-05	0.00123804266819789	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.6222182156796	2.51813555892491
Merged-chr7-25577063-1	3.03733473978455	0	1.32807914897181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150589230-2	5.08382112966963	0	1.31329652032894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-32249750-2	3.33034348736928	0	1.34651165992974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113518646-4	4.5051636062568	0	1.32218963400215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45221304-6	16.1847560670492	-0.331657523598893	0.479209698795461	-0.692092677657705	0.488879129767328	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29498501625262	4.0798628453816
Merged-chr14-51063924-8	21.9154218561594	0.385588148053881	0.384897811616718	1.0017935577089	0.316443309329265	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10066204407422	4.43697085526589
Merged-chr10-14034239-5	7.01527061649131	-0.96556581109902	0.637773419146628	-1.51396370891561	0.130035044153424	0.750310816357585	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60517559033506	1.67800608098903
Merged-chr8-70014551-3	6.42411783594148	-3.28015453553251	0.892622712560286	-3.67473792608764	0.000238093681091038	0.0062483813994277	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91910195302084	0.683637474991079
Merged-chr12-91184681-1	4.28909024397958	0	1.32108809605655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62277942-3	4.02917356585647	0	1.31122646245709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39656598-2	4.86979853047509	-0.474374268340883	0.713381220839073	-0.664966016042485	0.506072229643484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64708731890981	3.26679362495833
Merged-chr11-69110902-2	4.55075371097479	0	1.31700825408024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-74938858-2	5.59723707856154	-2.69956988291475	1.09824191862964	-2.45808308453862	0.0139680854689794	0.142063581798588	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14210485095577	0.382164212378408
Merged-chr13-103505220-2	2.87219670414461	0	1.38159770330161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27534904-5	13.016405746834	0.201033364732753	0.486961411517557	0.41283222854611	0.679729537143784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99344910232736	3.50847567309231
Merged-chr4-156209738-3	7.3695721650906	-2.18841854670465	0.813591208006862	-2.68982570751453	0.00714893459017277	0.0853094009732341	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77676885852799	1.63093322119568
Merged-chr19-57393581-2	3.93838657850467	0	1.3428333660532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117469558-4	7.40605732598337	0	1.31354472753467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36782206-4	6.20787809823711	0	1.31861035191545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18617722-4	5.522515120293	0	1.3112744649437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74992740-2	4.07688049864154	0	1.38671910551196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17816357-1	3.98065039237355	0	1.32972824720223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85781868-2	4.21733296163584	0	1.36281504220409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33744873-2	3.34269993871512	0	1.33483018499494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16141089-2	2.12477701879872	0	1.42627335069277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84703536-2	2.63584663770798	0	1.35011229683708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113340817-2	4.69423034211697	0	1.33202893462017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41978586-2	2.88745709912838	0	1.39204496782897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68087708-1	2.88489783746833	0	1.36920240626367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43031422-1	2.94533482415959	0	1.37762382742698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-25791019-2	5.17527516723568	0	1.31715026540305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48674692-1	2.33441721888087	0	1.45464848553757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142935205-2	3.43558164073158	0	1.41470683572698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75542075-2	6.24703481639246	0.436759195905803	0.717469539561001	0.608749461577203	0.542690516758887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89321444277706	2.17540470129796
Merged-chr1-34190224-2	3.54261525203703	0	1.38270859969427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86592257-1	3.88127398642639	3.35675995589582	1.16229657658268	2.88804081808894	0.00387649564010438	0.0538392102227971	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.61477032079243
Merged-chr5-123369058-2	2.89895159395829	0	1.36703070595434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24096791-2	2.01342027949062	0	1.5998706479912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57960035-1	1.64414977725199	0	1.5853298228199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11716845-1	4.44429292664628	1.80148728083358	0.917929188409096	1.96255583064727	0.0496978072934499	0.369082045163971	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.668152277665589	2.37544986530815
Merged-chr12-13563865-1	3.7355259120247	0	1.32866138314776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107097571-6	15.1826697403167	1.24153482647699	0.431046044681617	2.88028353767641	0.00397317678056203	0.05477451685709	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85707036338623	3.9786017444154
Merged-chr6-134433464-3	5.62144871183076	-0.0148134636699897	1.20486358315719	-0.0122947227197065	0.99019047769812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	0.469435083901436
Merged-chrX-96122121-4	13.493154084835	0	1.31855489034016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45926141-6	16.5008519133521	1.04532801960872	0.571092763352639	1.83039969456459	0.0671901933562697	0.461373430061305	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62716173800913	4.18906277094882
Merged-chr11-46448039-5	8.91286539978508	0	1.28984925712016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161885913-2	3.9488973164927	0	1.34050995233806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27545859-1	2.97684600350928	0	1.35584435435318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118045256-1	3.70796145375654	-0.861105949069636	1.29257890502107	-0.666192172659352	0.505288275364049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0
Merged-chr7-80298927-3	7.77595036441254	-3.39267522281225	0.91806519709679	-3.69546218889569	0.000219487144458285	0.00587089928029926	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50725056701351	0.73596151290311
Merged-chr19-42152184-3	5.05801966568153	0	1.30560036620888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9136278-2	6.24272725712115	1.2521611717475	1.08113176633518	1.15819478322432	0.246784556754671	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.689224284151795	1.0023426291647
Merged-chr6-56384397-2	4.03179710345852	0	1.34595025106955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117558758-3	10.4472470873238	0.132809938992114	0.436855662420778	0.304013317021384	0.761117745541298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60462197215913	3.76518191795578
Merged-chr9-116096901-1	3.4253171659519	0	1.36276544791752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16193905-3	12.5150202924692	0.778726110359291	0.532648327529514	1.46198921523159	0.143744165258552	0.803585099066248	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81358328672317	3.41795878044117
Merged-chr8-22843835-3	4.69083174285974	0	1.33581255852484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100152304-3	7.87597506319054	-3.10581655242126	0.871082078071804	-3.56546946677652	0.000363205447199156	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66783235968549	0.683637474991079
Merged-chr8-37049509-4	11.5136325787178	-0.309362428273694	0.436005044085368	-0.709538645183935	0.477990278643309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33678162068094	4.05356304758678
Merged-chr17-48278567-5	9.96813094343696	-2.64324924136282	0.689433961203823	-3.83394116058257	0.00012610631881323	0.00380108511745783	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95089285391995	1.04885222765555
Merged-chr5-125405876-4	10.6080454111716	0	1.29305912248762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60819358-3	10.643283392731	1.77520199897531	0.598627226177644	2.96545482956119	0.00302235725568894	0.0445720959671066	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61843321604377	3.46645636331075
Merged-chr10-93911592-3	9.36020424754157	0.729670954702519	0.498825146442704	1.4627790116558	0.143527857922019	0.802994127035296	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49958043433836	4.41194381826139
Merged-chr2-120098046-6	14.0971294638847	-0.992306156811984	0.727182005860838	-1.36459118737034	0.172381576130049	0.916032078864293	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45826266284416	1.81165705572607
Merged-chr4-135179323-4	5.8821869543889	0	1.30311195873553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58184329-4	7.39677500883179	0	1.3022476302888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128097889-4	5.76879497478204	0	1.30644600194074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156534107-6	11.9968854293905	-0.0303615500839293	0.484185500085786	-0.0627064422180136	0.950000267343823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58773646216589	3.27064576931242
Merged-chr16-4840436-2	3.37289243686728	0	1.33656295668304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25188953-1	3.00043485940859	0	1.37456630394941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12961550-2	13.1684242213602	1.51954693743553	0.458742743402105	3.31241629277085	0.000924938006285608	0.0179563276763932	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35469147371351	4.73747949076813
Merged-chr17-71594825-1	3.6358922775003	-1.68201109191641	0.861249933264315	-1.9529883567494	0.0508209748584807	0.375375542342294	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37440790172854	1.72583980988184
Merged-chr19-11601481-4	17.2325564946816	-0.508849178412368	0.574338459018342	-0.885974411816495	0.375631315949446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19204442297343	2.88056900113256
Merged-chr1-17607334-1	1.88002515884686	0	1.39089918514269	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106460853-1	1.70828670903548	0	1.56908472292921	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65242485-1	3.10354223251372	2.67233349081123	1.27466370133151	2.09650081666225	0.0360377875517069	0.293156388068448	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr9-118679728-3	10.8416480086026	1.1188328604978	0.70019213400455	1.59789407244402	0.110066553504228	0.666951873635693	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73688542528581	4.20200363041412
Merged-chrX-159156016-4	5.95457320833563	0	1.30607293975862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-76887201-1	3.88921280411665	3.22387387516702	1.32183652622943	2.43893538360843	0.0147306019710663	0.147658523761512	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.34574950999398
Merged-chr7-45150944-1	7.95720260367855	1.75157231317097	0.647252864516057	2.70616386453631	0.00680654504005882	0.0823849904519823	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66860850939354	2.86829562625364
Merged-chr6-84640883-1	3.4640628181255	0	1.37117535872337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45376932-1	1.15327051249227	-2.17868720375433	1.83868632635499	-1.18491510625054	0.236051014024101	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.957089151783903	0
Merged-chr8-105121167-4	4.64302926714204	0	1.30309638669575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50802415-1	2.82392912984813	0	1.36046815901597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-9093345-1	2.34319651841711	0	1.47725194568444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129534411-1	1.57569740882134	0	1.6374235875667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24150411-3	3.49194143666121	0	1.35482245234254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84707850-1	5.72122079044738	-0.996962611440753	0.850344863631671	-1.17242151282352	0.241027866578696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93031143783782	1.15692263537643
Merged-chr8-106022703-1	3.02885944826602	0	1.31708205478753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192087255-3	4.46891524324781	0	1.31629006640838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35727247-1	4.24136530704419	-1.16252546699469	1.16193404145756	-1.00050900095533	0.317064243893281	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42202587353305	0.729295484888209
Merged-chr18-57717271-1	2.24973946983763	0	1.43731128077979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17655937-1	2.54897595196052	0	1.45597826192859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-70659887-2	3.1636688642537	0	1.34713987465337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38316202-2	3.11924347634347	0	1.3896030340135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53850103-3	4.89844674022564	0	1.3131034215183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8804101-2	6.03352742606185	0	1.31844592958827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5409898-4	4.04636982475064	0	1.35474647934918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-12559397-1	2.27310867578164	0	1.41048991910976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42965843-1	4.63205037974418	0.641028071939309	1.11217163748453	0.576375129821833	0.564361650937246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90376728627297	2.01983817183747
Merged-chr13-101850978-3	4.36830982990948	0	1.33134454071629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24713739-3	5.05783148849745	0	1.32265478366599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43123574-3	6.33352370923477	0	1.34434556909591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96697934-4	4.53422301015978	0	1.3121081114302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20184677-5	11.9258668403886	-1.15742489563292	0.793816051160615	-1.45805176645229	0.144826274845549	0.807699731676818	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13545636144834	0.793480537552656
Merged-chr15-81393172-3	5.19550263658994	0	1.30742448252681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122951706-4	8.47752575143903	0	1.29493511237216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16555954-2	3.4122125322117	0	1.31035483954851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113800846-2	6.93809802245049	0.812347535929315	0.629924869572991	1.28959432333571	0.197191547718764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31338757688571	2.84678082177266
Merged-chr8-10964898-3	3.64584701738024	0	1.36191781293921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87187174-3	5.36338435707856	0	1.29801339894195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87391507-3	8.96234450311646	0	1.34061212642851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56121867-4	7.945942647295	0	1.2951490825276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12473767-4	6.10895561181177	0	1.31570437745447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9110425-4	4.53630663191821	0	1.32120085979383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57172465-2	4.02841479649744	0	1.33587613899526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79618760-2	3.36029993939948	0	1.3383452152289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119814941-2	4.85154772181702	0	1.34506869708035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16220846-1	3.52645226471896	0	1.3801925567711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87324025-4	11.2989614381771	0.166966881978464	0.566986599464686	0.294481178454842	0.76839024356005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91692446521156	3.38965051548052
Merged-chr18-31701408-3	4.69553721484764	0	1.32840474058319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110604768-3	4.99347352656222	0	1.31442743954522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85658707-2	4.54901234779243	0	1.29904434558115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73646480-3	6.09078745666229	0	1.30099314063835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68073604-1	6.47016475104636	-1.74757389779883	0.937965321749077	-1.86315406047212	0.0624405941267801	0.436529695496798	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51566315128927	0.986577844696341
Merged-chr3-154540340-2	4.7546156275979	0	1.32385656305821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79058328-3	15.7028267681446	-3.73239082256602	0.778519427352967	-4.79421667774749	1.633116873028e-06	0.000119772901442074	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.95560898455009	1.29358708977899
Merged-chr2-101871369-6	12.5093808937487	0.429686682957444	0.503237221344432	0.853845194140265	0.393190769614969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46573293732591	3.58123398270497
Merged-chr11-19955860-4	6.04441169101113	0	1.30856402694796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103184048-1	3.40473063414323	0	1.35524558693588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45388809-2	4.92524675814855	0	1.29754842230126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41045312-5	13.8608894612192	-0.197343469950204	0.492017383400088	-0.401090442346694	0.688353537359765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37449805959836	3.39633142321475
Merged-chr12-25298726-2	8.23779937376172	-2.02873554002342	0.71698757807448	-2.829526761777	0.00466169011124832	0.0617020056734115	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81004475958414	1.75912454751757
Merged-chr14-31234153-3	4.7570755571117	0	1.30663604805274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65472669-3	8.33995687060547	-0.920486098285234	0.655815524600848	-1.40357473063096	0.160445524211619	0.86964774594662	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95869219645899	1.58148496924487
Merged-chr17-24742355-10	26.9692304658165	1.12502308304062	0.343886367501499	3.27149660282976	0.00106979873805107	0.02000202241393	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68986410001534	4.91387993824955
Merged-chr6-90569873-2	3.19216448073796	0	1.35425865058122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54146280-1	3.93715644593822	0	1.3233475242745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8864737-2	2.6191598874382	0	1.44662061350998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80841137-1	2.62380866147254	0	1.39589418286548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34368299-1	4.91972264474774	2.81011436275704	1.21863673146207	2.30594917271661	0.0211134725585419	0.195321865525819	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.27465395918041
Merged-chr1-132194892-4	6.05447872898259	0	1.32888729465426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127746028-4	5.56793565498926	0	1.32218068147383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102731456-2	2.74086784668797	0	1.42906143252199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21468187-2	3.50773481733276	0	1.34228407101141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45113140-2	11.2939936402494	0.700319387711	0.479307362460367	1.46110709444591	0.143986053588116	0.80405923088951	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99431900313857	3.56134390254646
Merged-chr2-5698835-2	3.08018462642199	0	1.37962939763415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17449547-3	5.98161301743028	0	1.31466861446823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10703547-2	4.3379598168735	-1.34418837359207	0.746979952837294	-1.79949725355596	0.0719400579749678	0.485790537194611	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45490398723785	1.5268023559189
Merged-chr3-33956377-2	3.28081923145255	0	1.3379964003467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12735170-1	3.13935738897108	0	1.33681362252882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66932538-1	3.05211520550722	0	1.36380402210033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47748497-2	3.63386614068719	0	1.33684234410099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61101564-2	4.31391937393908	0	1.37787469514687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48559860-5	16.4665061298686	0.0221911135230987	0.475186381566444	0.0466998095567176	0.962752482133533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76699694038515	4.80485910224662
Merged-chr9-95574090-2	4.58962332066822	0	1.30203061083066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72375054-5	11.7388736588201	-0.0646292586597637	0.539210831386065	-0.119858977041747	0.904594861710057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17576589589066	2.64974215847459
Merged-chr7-16928467-3	5.84325002304981	0	1.29465294421669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34334478-3	12.2011691968789	-0.468795677387195	0.461920395295506	-1.014884127572	0.31016106515447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22337321711245	3.72017641043879
Merged-chr2-154902609-2	7.75630520414885	-3.0002823567654	0.926707189578155	-3.23757319518709	0.00120551010846142	0.0219246489138658	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65086308065876	1.10936615683937
Merged-chr17-71144484-4	9.83667556371078	0.857853206067192	0.64411645680039	1.33182935633802	0.18291626899765	0.955386980570735	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0224533665373	2.44367328773085
Merged-chr6-90422695-4	5.0179908253981	0	1.31132974696982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79293165-3	5.72383726411553	0	1.30708891478866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37557899-2	3.94387367264853	-0.948279906455042	1.28457128338811	-0.738207305984543	0.460388483885431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr3-87562563-3	4.87058621768159	2.49821611454558	1.24007388253071	2.01457038144154	0.0439496834792788	0.338512024591815	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr8-11419883-3	5.07998900583128	0	1.30875206970458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139001175-3	5.08762098942986	0	1.32162652624709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58903068-3	3.48477324484366	0	1.37982401890859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122557203-4	11.4602047936468	0.54745137322913	0.689461548707086	0.794027417853452	0.427179469935322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53233423384049	2.50794861036089
Merged-chr10-42271589-2	4.63557457515385	0	1.32091177638746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14992918-5	10.0038967750455	-1.33543488344945	0.705019986473177	-1.89418017796899	0.0582010982362327	0.414835183829064	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1514510857031	1.46894927517136
Merged-chr6-83450865-2	5.12628836829449	0	1.3111998712825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127011189-3	4.16069207581013	0	1.33938139749869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4660009-3	4.41257190069606	0	1.31544898862699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76088652-3	4.77413764576569	0	1.33762356795831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62044901-3	5.06883340275768	0	1.29945316186063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27242666-3	4.53166138333363	0	1.31473057450575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-40869414-3	9.40909734636201	-0.121552392774965	0.61761106216019	-0.196810582294004	0.843975769611291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03898437424688	2.08364730863447
Merged-chr17-88041017-4	14.2412024061231	1.19338118611151	0.4948538732617	2.41158299569456	0.015883436347975	0.156454481699544	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01122091233728	4.88955189025764
Merged-chr13-63634473-2	7.93152738090068	-3.42264198472605	1.10972169059215	-3.08423455515204	0.00204076631606442	0.0328948978020585	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91115332455794	0
Merged-chr17-10874513-7	11.3519513961837	0	1.28871973519499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5363191-2	5.00118599863781	3.46344010963821	1.1085149112384	3.12439650069204	0.00178170190123926	0.0296427325264668	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr5-66076829-4	4.88489582369328	0	1.30976852827925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39542978-3	4.23843885019329	0	1.3475975591371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33316013-4	6.8889386970795	3.41348221878435	1.08533361678281	3.14509950304748	0.00166030349313845	0.0280491706470075	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr4-81745267-2	4.4180484478026	0	1.37031340960648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121999780-2	4.62169971944675	0	1.33344240634661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77239869-4	4.28527859702729	0	1.31922733779877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124847455-4	5.96816465172674	0	1.31652754821908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34663283-8	17.4890670924948	-0.891455858529768	0.407330737732875	-2.18853078334191	0.028630961472385	0.247149116033615	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76040747120774	3.7790600095048
Merged-chr11-14449375-1	2.47520290790664	0	1.4394712084826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148646805-3	8.40053224495626	-0.423289921601511	0.637378761102645	-0.664110490392294	0.506619596452506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16593067079929	2.45448509329049
Merged-chr10-68132371-2	2.91674846821799	0	1.3451351158791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102640801-1	1.74566738421569	0	1.46182039436868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84218332-4	14.7161825349284	2.41401090711663	0.705511173494336	3.42164801609058	0.000622428351336914	0.0130473858764345	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5163180603627	3.63051091633326
Merged-chr17-79055715-1	2.92083229248723	-0.601427496006945	1.70967305727515	-0.3517792442524	0.725003825571379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75044832951225	1.70656116796365
Merged-chr10-121484355-1	2.10889540735852	0	1.36233701285631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21568163-2	6.48293299629766	-0.810974404548164	0.735590878848312	-1.10248023441764	0.270252946868352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58885142155848	2.3022060396979
Merged-chr13-20797552-2	11.3980722226397	-0.623514546074354	0.553225331679242	-1.12705349948774	0.259719862079386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51457222339475	2.48366051229539
Merged-chr12-88368858-1	1.5629396385891	0	1.59715422211409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116848406-2	4.73393923727793	-1.00444492303599	0.729613887810869	-1.37668010411606	0.16861117263996	0.900757495694147	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78544175436782	1.40264952818025
Merged-chr17-12314254-1	4.24335057476397	0	1.31629166443562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94838293-1	3.76130832510148	0	1.38758883648491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5507317-1	2.32332204877349	0	1.41395387307947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84149240-2	4.10935475496395	0	1.32779218901958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41359570-3	5.3694418175191	0	1.30121649819342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10297180-4	7.51242351837754	0	1.31967244174848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101596932-1	1.81276004939168	0	1.42311724318143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24628638-1	3.23886325924115	0	1.33522179934978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89340258-2	3.72348879045811	0	1.32319650474786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124440357-2	6.27479840098073	0	1.31178039991357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3300414-2	4.85386957083727	0	1.3182508514575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151619478-1	2.08754086643333	0	1.40189225395863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150872830-2	2.62346179029238	0	1.47124162638786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117886013-1	2.74633449285312	-1.40058556683995	1.09716366791686	-1.27655117262422	0.201760749553352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62433202270739	1.58492111464609
Merged-chr5-148342559-1	2.38547959620835	0	1.41813980717724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22229705-1	2.35166559053648	0	1.4520317739327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105354252-3	12.5548186332768	0.601418417033504	0.446882640189329	1.34580841354388	0.178364311353594	0.937984410889423	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.225358920923	3.4773668687479
Merged-chr17-46347370-2	3.6986660653013	0	1.33735577496785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120494844-4	9.51682925962787	-2.39510770664429	1.00030567133644	-2.3943758145891	0.0166486802561393	0.16242244107058	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52484477140661	0.469435083901436
Merged-chr13-3523626-8	19.9765499941025	0.952763100003979	0.419488278490432	2.27125082834874	0.0231317980484714	0.209923669839958	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68275142227121	4.44906501019334
Merged-chr4-33244145-2	3.98947779913155	0	1.3605040373342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77485461-3	6.08623743896568	-2.53244814062646	1.03073747554314	-2.45692836509316	0.0140130626117664	0.142388056200977	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22143769740622	0.733321818366247
Merged-chr6-108426910-7	17.8126760679139	1.34830596166515	0.360096273466064	3.74429301555163	0.000180902437937161	0.00504965856874914	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77432257016179	4.98783109880826
Merged-chrX-98989782-4	6.36215119338424	0	1.31875887391899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10533787-4	8.81149998228789	0	1.31175542533526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145351432-7	23.5906549607577	-0.142357643113822	0.363639186424325	-0.391480479630452	0.695442114703515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79363686763272	4.66895742945608
Merged-chr18-21701974-2	2.81105593803042	0	1.34979858005554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29129005-2	4.29865534253187	0	1.32898238372825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54886391-3	3.99912963560115	0	1.33952254892852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34633506-4	10.4121099326507	0.534049978036245	0.588770337144889	0.907059925311458	0.364375108663025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61627246427344	2.94695553599345
Merged-chr18-4254880-3	4.54518676475568	0	1.31294027476446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115900884-3	9.56536502184988	3.08290006626789	0.717845630670966	4.29465602985744	1.74964393866831e-05	0.000794791135354186	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09990907556301	3.64837690950518
Merged-chr9-46106306-3	6.97097411079484	0	1.31506032152218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74601374-4	5.98911508654807	0	1.31173748535272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102042435-3	8.50689599165142	-1.08906602441518	0.792158087784778	-1.37480894433671	0.169190684425543	0.902967532217539	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24283982806445	1.19380919831911
Merged-chr14-47360578-7	22.2205215046034	0.0453780276687619	0.38339545998939	0.118358281211827	0.905783780137389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83027008438203	4.77851938563326
Merged-chr13-55696191-1	2.29690654546776	0	1.35913391632666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120363618-1	1.78281806629047	0	1.43040953190712	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28722324-3	8.90442072231382	0.539337453343025	0.513572495736089	1.05016810249935	0.293640832047862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8434440149653	4.39794054181719
Merged-chr5-41563597-4	7.98040529691131	0	1.28784713292629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43613302-4	4.82162557313632	0	1.31387274759841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84454229-5	14.505280890209	-0.375097237346743	0.396422568000858	-0.946205558473481	0.344043751618885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63363704301359	4.16281434892043
Merged-chr16-5471209-1	3.37332218598609	0	1.31918192702068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113761920-4	6.1221408515896	0	1.303964721244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94486158-3	3.8245680529352	0	1.38670528868639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66136027-3	4.82402914201537	3.66168641326621	1.19441069542293	3.06568454828649	0.00217172307548136	0.0345204125736816	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.8405601103675
Merged-chr17-65870319-2	3.65283218779472	0	1.34037054868688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34757085-2	5.08650498689905	-2.62464124055759	0.798533270194273	-3.28682766081749	0.00101322821821127	0.0191914235209374	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9017361225062	1.23021119707292
Merged-chr8-70620859-4	16.6481122992081	0.533657574574829	0.358415098534129	1.48893720369878	0.136503905582112	0.775785720487795	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35198120724085	4.84040426908951
Merged-chr2-145754157-3	5.4706718927034	0	1.30592813190941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17645888-3	5.97020592927079	-3.10678302799077	1.10824750980052	-2.80332958162927	0.00505779541590822	0.065759391016303	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98810196215668	0
Merged-chr8-103970668-2	4.20951854533708	0	1.37270129739824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35039395-5	14.0192410990849	2.45144399674102	1.16284313171561	2.10814677395417	0.0350182956078989	0.287150902847755	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr5-108566678-2	4.44983465885451	-0.205568684188767	1.10155762761638	-0.186616368526802	0.851961431978824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913544961417945	0.73596151290311
Merged-chr8-83090281-4	15.4097561412667	0.232432395615986	0.462705792779097	0.502333014289607	0.615433289830005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21774854593853	4.32277979528981
Merged-chr7-142392014-4	6.0585186204944	0	1.37137453527004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116072738-5	11.2434549926144	-0.892628945720386	0.637585686412859	-1.40001409181946	0.16150909864434	0.8736733079481	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00854034370448	2.15544236747999
Merged-chr8-106753667-2	7.90350458313459	2.983305503863	0.664961532981539	4.48643320837903	7.24254076131156e-06	0.000389844372807796	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70154450951495	4.55354499420446
Merged-chr14-57701979-2	2.91774281763494	0	1.37635622561957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72822612-1	1.96586408744928	0	1.49496382621698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82367002-1	3.08260833450891	0	1.3223942736293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148997655-1	4.99593981800942	-0.469344461316491	0.7362221322989	-0.637503873798162	0.523796687480928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64441670694745	2.33578942466974
Merged-chr15-88868034-3	5.78730916522023	0	1.30745681517755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44384391-1	3.36640499075467	0	1.34483698518459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-50804944-2	3.48191695098267	0	1.35157597705379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165210997-2	4.3188647773208	0	1.33582318198831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41434204-1	5.22854665976887	0.363491840612929	1.03481871720398	0.351261370295911	0.725392272773913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64737343099245	3.53307014239253
Merged-chr4-46457437-2	1.99783773963409	0	1.38338584459864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20792360-2	2.38367002067025	0	1.37095226746216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91726878-2	2.33268571966498	0	1.47992546346405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31108580-2	3.74053860652331	0	1.36212671506439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-14068231-2	3.88426305697726	0	1.37831592851346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72035861-1	8.30582599651928	0.125311953756722	0.764002658725626	0.164020311088635	0.869715154411727	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68781434822786	3.71866449080396
Merged-chr16-36795079-1	2.60351269553528	0	1.32954861407053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62354114-2	6.95459573495423	-0.598731407412567	0.578512447385685	-1.03494991355545	0.300692302691592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06728731103494	2.51134589925281
Merged-chr13-51736575-3	8.34762673998215	0	1.31553809217082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28053265-2	3.69614695943731	0	1.36275190888699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120602088-4	7.11846991580112	0	1.29066524230229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25609209-3	4.87726160495222	0	1.36319356219992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51900005-3	4.29582511709663	0	1.31384331292978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161214725-3	9.20005579432931	-2.91232325393835	0.832753420119671	-3.49722160675105	0.000470131118081961	0.0105029702708321	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51469303804543	0.683637474991079
Merged-chr9-45252195-3	4.66646569097055	0	1.31320513717504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27612958-4	6.28609728316358	0	1.31204196218795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81086786-2	3.29568490860424	0	1.36098201048958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74967881-4	12.6534641050292	-1.67650339573885	0.48438228608396	-3.46111623794653	0.000537940486095719	0.0116359678928867	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45529472612687	2.73228483412235
Merged-chr9-47588566-5	14.8532497214024	0.525039474539138	0.418442025822403	1.25474842902605	0.20957009908408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67391730379912	5.13653597738239
Merged-chr9-118807833-2	4.37079311943315	0	1.346827211064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44776403-3	3.38891254354748	0	1.35018568374204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125771371-3	4.5445528887864	0	1.30738209145486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66896262-3	4.26417849055089	0	1.3442455255801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54079675-1	4.28905091874168	0.283776635292851	1.10556160622009	0.256680978876502	0.797425056358442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	1.10669213789164
Merged-chr5-39927752-3	4.46365131918665	0	1.3243362525783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49923598-4	5.50115225145178	0	1.30604533059525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9132727-3	6.02225012802232	0	1.30760259056538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46136527-1	2.44537926591789	0	1.40441624668617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121734012-2	3.08196790642121	0	1.33047771635086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11053997-2	4.43032102553425	0	1.31341443008998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38354228-3	8.04736751203619	0	1.29598693495102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-23723724-2	4.30852376703455	0	1.3271069916775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59550123-3	6.55343217548329	-4.07303440229076	1.13008850716171	-3.60417292670328	0.00031314851867182	0.00772772020435376	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4840616705811	0.382164212378408
Merged-chr5-97001572-3	6.98972952568244	-0.212395218870204	1.2583953332039	-0.168782586255657	0.86596765596015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	0.306240821987646
Merged-chr15-11765070-4	10.8776490546042	0	1.30605420617475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5401690-4	5.78813824006744	0	1.31176839820851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101153641-3	14.9593754558066	-1.37113502695098	0.566131953481504	-2.42193541367698	0.0154380940792695	0.153199346348359	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08916069910673	1.86273490322598
Merged-chr4-132824172-6	12.4612521522596	0.611642898679309	0.538890849457378	1.1350033115151	0.256373930882223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72781927631066	3.19951472846633
Merged-chr7-19306516-2	4.58988860670409	0	1.36908292051581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40147725-4	4.65681640951759	0	1.30088575524603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68195230-4	7.383237154943	0	1.30700398541522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36569550-3	5.46128727789141	0	1.29837073657191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111108879-3	5.85801151716197	0	1.2948793762282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129795538-4	5.78698390626907	0	1.31362502904912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-22994181-3	6.43439345025975	-3.46613907083307	0.977502122776978	-3.54591462265693	0.000391252947190844	0.00912123263900566	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59090583455434	0.469435083901436
Merged-chr12-118748666-2	4.93035199855173	0	1.33317661319449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54248577-5	8.76251604995171	0	1.29216941350181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99329667-1	2.99080824829834	0	1.34662564190706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169269298-2	2.88357048347244	0	1.38443079584231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89238485-3	3.86970388136586	0	1.34518756686257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43885657-1	8.01195953163739	0.381096893846033	0.674539719723377	0.564973244277324	0.572091962914991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15171789801468	2.83888390809294
Merged-chr9-47444973-1	1.4040692222023	0	1.64801330687404	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96510602-2	3.14987643981448	0	1.46916228141765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8776545-1	4.22045802317941	-0.656744663328728	0.756956884602773	-0.867611718299342	0.385606929196187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09327184953798	1.7414873742332
Merged-chr3-64204965-1	3.09297011367579	0	1.32636938536042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94814541-1	2.51188888666367	0	1.37709958238465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38082020-1	2.54112091015991	0	1.38387898136165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70249022-1	1.65371086647635	0	1.45400748399766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27178719-1	1.84786761055224	0	1.42185306577078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9115582-2	2.83645933600378	0	1.34391782683905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-12206647-1	2.33552549845727	0	1.40822336087789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66991852-1	6.75386336366609	-1.16800141231878	0.870330235766543	-1.34202095287436	0.179589202007372	0.942832489304552	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28553162150397	0.735627456805112
Merged-chr10-111050446-1	2.41144818969885	0	1.40659089553329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82019156-1	1.7692559731328	0	1.66168838669645	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31182779-1	1.86000774166851	0	1.67042086171547	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80232952-1	2.51172895106625	0	1.35431463528704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79768389-1	3.12164191137534	-0.834875744054419	1.17631345828902	-0.709739175532997	0.477865893772308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14090682889784	0.844015785373878
Merged-chr19-58073435-1	5.12164040040559	-0.850555429828256	0.956743504673547	-0.889010926829837	0.373997207397722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30557996251068	1.50690972966086
Merged-chr19-34753477-2	6.28004571810269	-0.0980015165007311	0.672408318228103	-0.145747031742528	0.884121091798054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54153346520892	1.95160684218358
Merged-chr13-95493483-1	6.00597287436802	0.13547511386821	0.976434624424884	0.13874468446672	0.889651906460307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12579677204964	1.04885222765555
Merged-chr16-32813616-2	7.05051154579588	-0.20995545786181	0.676520342180096	-0.310346111966457	0.756297768698107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12166208475731	3.34385981813042
Merged-chr11-4422268-1	3.44491737625951	0	1.34393089886766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16565936-1	2.68180259380547	0	1.42887264823417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63711658-1	1.69630155390006	0	1.41276771715571	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17801187-1	3.6624654422601	2.34982501270485	1.29166584993175	1.81922051498769	0.0688777942020833	0.469576248297271	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752351597074039	2.07844127098014
Merged-chr7-74500051-1	2.0185024438166	0	1.43542467901384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90805101-1	2.88925705799033	0	1.40215988620749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12538713-1	1.53907446799685	0	2.34553820166183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17236208-2	3.99523140089813	-4.12790884019003	1.08928258521995	-3.78956654241977	0.000150910383483655	0.00439064555615445	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97477001415065	0
Merged-chr17-45119455-1	1.42927010559153	0	1.49566554065303	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79092730-2	8.81890807860277	1.28603902866942	0.602328171506238	2.13511353030929	0.032751737697928	0.27406774895746	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11344060392529	2.96603417472325
Merged-chr6-17754610-1	2.57356657607827	0	1.36533414850498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94721220-3	5.74729584974936	0	1.29777727738995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80041866-4	7.87399289024788	0	1.30500253794994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120073337-4	5.6654864376232	0	1.30052154391029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83654730-3	4.95749443272113	0	1.30872914270217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7880160-4	6.18590155571147	0	1.37413128892191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78903322-5	15.6290598247266	1.53622811927762	0.444344428942137	3.45729127950351	0.000545634732979674	0.0117557030205373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57580687227784	5.12075306912683
Merged-chr4-133688455-4	11.3405526425941	-2.8546939768565	0.772539582476204	-3.69520739339519	0.000219707375154438	0.00587438548970618	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96603756727323	0.82780788634396
Merged-chr12-55016565-3	5.66130493334192	-0.191261194246315	1.26488236198787	-0.151208681529666	0.879811102169122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0.306240821987646
Merged-chr10-60741699-3	4.54478668828369	0	1.32572589166662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9507277-4	5.21191825008058	1.95578463981102	1.30555770069013	1.49804534780591	0.134121468910697	0.766177245164646	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr4-3779857-6	14.198587725171	-1.2392641640717	0.744201772204556	-1.66522603191419	0.0958676692644616	0.60057220935246	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35970554190325	1.64290788048512
Merged-chr11-108252144-3	5.0244117337485	0	1.31458634769546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58018433-3	9.34487436483598	-1.70547820321339	0.543090708739455	-3.14031924275027	0.00168763817454623	0.0284008251748385	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53349126029964	1.79651160426718
Merged-chr12-40606117-2	5.96720058999142	0	1.30541708609987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44356386-2	4.12664167587025	3.99743621457926	1.11108429050101	3.59777943829692	0.000320945601059483	0.00787831680974948	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.57928534738074
Merged-chr11-80490043-3	8.77424720149942	-4.91016243530686	1.05752384099218	-4.64307493124701	3.43261788399732e-06	0.000215888208130595	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66130387287232	0
Merged-chr2-133430767-2	4.6109605021731	0	1.37337425739137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97238695-3	5.56251132586748	0	1.32854707061232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163814996-1	4.36817325156687	-1.96442115139583	0.748399596289421	-2.6248292504906	0.00866924299549851	0.0992293488848914	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87454995343597	1.84231959469675
Merged-chr2-6436233-4	5.55428213680609	0	1.31501803214579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140502513-4	5.9828761363924	0	1.29363461483735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124775847-3	9.15902465064524	0	1.29574939845338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35749498-6	17.1128953249152	1.75547062754764	0.476712927143218	3.68244813092776	0.000231004878862114	0.00609662553074464	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02752587397248	4.0714204225784
Merged-chr10-12612650-5	12.766503763872	-0.0633654133784388	0.409248981635746	-0.154833405144151	0.876952655273048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98465238945122	3.94048651215477
Merged-chr11-46780021-2	4.12409973071985	0	1.33268675506873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49093748-2	6.05207699529972	0	1.31125129005036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45960425-2	3.42180296585806	0	1.37426867409638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41461761-4	6.93740619096263	0	1.31697366905609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96476565-3	5.12437907556095	0	1.31501744009954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11239197-2	5.3493280493901	0	1.39256515070848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136368771-4	8.58266041065506	0	1.29913265083441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118090157-1	3.30278250790085	0	1.35314579746018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129067771-3	3.54971273245967	0	1.33251553829288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81147994-2	3.76169701075011	0	1.37895139962144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43458790-4	11.2265676524206	-0.0341272363275613	0.462998044506985	-0.0737092450658211	0.941241742304049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34706821325858	3.28226228333929
Merged-chr6-31079091-1	3.93436689801021	0	1.327134922718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166351994-2	4.07151129583096	0	1.32125304933343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21284900-2	6.81696983113354	-0.817991379540125	0.96292013840333	-0.849490364690555	0.395608489439331	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34064979786009	2.08320241899399
Merged-chr13-48566487-2	3.79314681918381	0	1.34221460983516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95250308-2	3.90324510792619	1.88261580166542	1.32320703390579	1.42276737761014	0.154803601173343	0.848498248806682	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr10-111389128-4	4.65534406923847	0	1.30933221876046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38545227-3	5.46634753473133	0	1.31746551066285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69176589-1	6.62395975144859	-0.732524601598563	0.662881205846927	-1.10506165378856	0.269132874888601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72099262201421	2.88456143589366
Merged-chr8-86807839-3	6.90727833779387	0	1.31032237272276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84942831-2	4.34561539833055	0	1.32333966303567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61983419-4	6.97348126789301	0	1.31568325191058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101641698-4	5.3221851703196	0	1.3193773764399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81010545-4	12.5076775900083	0.893937575996154	0.529315513747907	1.68885580108257	0.0912470671808049	0.578615318000667	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12159117777835	3.08579303752848
Merged-chr19-43815893-8	18.8969954875045	-0.482272255512609	0.454570550074159	-1.06094038743586	0.288716993378551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74522530990846	3.24405543141491
Merged-chr1-58716476-1	3.62238719606221	0	1.32595717423083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56086451-2	2.36925946107296	0	1.451062174128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53980079-2	4.94883426876375	0.510522352454813	0.672667503857393	0.758952007533048	0.447881266354884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71161076681826	3.36712499183181
Merged-chr17-81619460-2	3.11257099969221	0	1.37842038202159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113493172-3	4.12520861895649	0	1.31226011511016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18628280-2	4.70321759802082	2.85762976535549	1.03918675754529	2.74987122825316	0.00596186887268326	0.0744071391653654	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2005342159295	2.6646566865835
Merged-chr17-17826129-1	3.72646824889736	0	1.37478522767264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120858392-1	1.2278313170911	0	1.48750233619114	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64896771-2	3.95072070587868	0	1.31872696749453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-93597425-2	2.62925515762779	0	1.38055038352035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121846775-4	17.2977707147051	1.52035367685325	0.398959139319903	3.81080047306339	0.000138517536071079	0.00409944153627751	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07352609202422	4.95144121033304
Merged-chr1-94056202-2	3.61917665601977	0	1.40178803950047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87812617-2	2.75342333510133	0	1.42418942699604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49741714-1	2.89802749208506	0	1.33278916055857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14187967-1	2.48483259724036	0	1.38002584642494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17422752-2	3.30989105995936	0	1.35191848950463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51452320-2	3.79581161643899	0	1.32005102110061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19978992-4	5.19317422472365	0	1.3261802811211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18917560-2	4.03061191404479	0	1.33181883634147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14391257-5	17.460801136991	-0.66260941190053	0.363050382677984	-1.8251169631413	0.0679833808841589	0.465323348408531	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.17850103228512	4.58156300986994
Merged-chr4-56059104-3	5.0918748000801	0	1.3200776224404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36762021-5	12.9432237237663	0.298873311009323	0.546961123564256	0.54642514455456	0.584773729817579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98830681843931	3.64237242547876
Merged-chr3-7496754-4	10.7988723090728	0.958093138829002	0.614444023304435	1.55928465814745	0.118929021248803	0.705989809458966	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4770330057036	3.27807726653601
Merged-chr11-19830853-8	18.9243914727735	0.0382049956448062	0.341208098447081	0.111969779787426	0.91084736809435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41050918154944	4.357924658746
Merged-chr3-123179196-2	5.94638431593157	-3.40931460163022	0.923065904696198	-3.69346823914194	0.000221216150818911	0.0059050615160999	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92879123245193	0.581381506691384
Merged-chr6-32183931-2	4.34990365269008	0	1.34093833304649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51026930-3	4.24633515786239	0	1.31301990509628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105026334-4	7.36498307921346	0	1.29716336515628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144617958-4	5.85704428262316	0	1.32401619653677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160209563-2	3.48636621821443	0	1.32142325755836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12815416-2	4.08218221869025	1.88955966072051	1.3119407793649	1.44027816685081	0.149788715883315	0.82835545973352	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr3-45284119-1	2.8258345625176	0	1.38523940685291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149777312-1	3.12566976440432	0	1.33994025559706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149836201-3	4.93201188185527	0	1.32378989443543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78807651-1	2.93979262382929	-4.54803771953608	1.24959741915509	-3.6396023629844	0.000273059375475726	0.00691602246117704	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90110685447276	0
Merged-chr11-79577928-2	4.22694707843268	0	1.31697641257905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17086285-3	9.0989165827196	-2.03705469516842	0.652924528512331	-3.11989304462154	0.00180916717530748	0.0300360361376125	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83084805543746	1.26514550294121
Merged-chr13-75878094-2	10.4084867387758	1.69124131595317	0.517934238577756	3.26535917107413	0.00109325353584856	0.0203358228162709	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92483893209588	4.54667806205004
Merged-chr3-22126575-3	5.16002863859124	0	1.33609454416716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123126448-3	11.383190674502	-0.519294682895666	0.604237442259116	-0.859421556125574	0.390107981182641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.293265009848	2.35950768455674
Merged-chr7-99102721-10	30.3143503799477	0.776620601204045	0.347378960334874	2.23565814249482	0.0253741728581955	0.225008288990847	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06746994951351	4.9453221010687
Merged-chrX-103553456-2	2.5709135857318	0	1.34125493409533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79257531-2	3.73826858348999	0	1.33904236461061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64198511-4	7.72934023758244	0	1.32654919263305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44611205-2	3.8811766558313	0	1.33466345255202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21159644-2	5.19926175991884	-0.989962848885161	0.780691699716875	-1.2680586321645	0.204777013041223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09384746807321	1.5713323725813
Merged-chr3-149170082-1	4.8498535598978	-4.22812232724268	1.06644215655379	-3.96469916465593	7.34885676346561e-05	0.00248421077933989	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11496916780136	0
Merged-chr10-71261850-2	5.59495242830248	0	1.33228655675488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35051174-7	19.276892202431	-1.07514530674405	0.47255060286201	-2.27519613821762	0.0228941664366028	0.208362423393628	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17042996955394	2.54021653655567
Merged-chr11-79869985-3	5.97032997555379	0	1.3006959198057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66046710-4	10.7808295119849	-4.15278576503438	1.02689700244427	-4.04401391293356	5.25437991015986e-05	0.00189279332750445	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99110208786069	0
Merged-chr8-82398325-7	22.5081611837303	-1.44245156871913	0.366464566419825	-3.93612834880916	8.28066977464524e-05	0.00273149241339711	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.73442312309236	3.93701478399457
Merged-chr11-8685353-4	8.33526788116651	-2.90780786096744	0.783949866314952	-3.70917578522709	0.000207935031865278	0.00563572069359952	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21853465837293	1.4217268527323
Merged-chr12-113042052-2	3.09291348886899	0	1.36031464785281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11687029-2	5.1319828990239	-0.415946301760907	1.30713929834829	-0.318211151853899	0.750324774136495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	0
Merged-chr1-151703032-3	5.90519504073741	0	1.32801865360811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141737031-6	16.7778161453787	-0.440650374329027	0.414734018613231	-1.06248910036957	0.288013703563902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30939174253574	3.7484255461783
Merged-chr2-165070531-5	12.4949924636157	1.74950929004684	0.476514122323406	3.67147416642452	0.000241155457455753	0.0063174986369902	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73938525422943	4.86223710471505
Merged-chr9-7577560-3	4.70055111475951	0	1.33268020300329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45698270-3	6.07380207664961	0	1.31047941092863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48427832-2	4.37514479385613	0	1.30611799248235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45923141-6	29.3869288740389	1.0600733666446	0.346761024378908	3.05707185097669	0.00223510692612937	0.0352705378398575	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03450375896295	5.19244256319939
Merged-chr6-137414738-4	5.56401533398777	0	1.29168767248488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45221760-7	15.6213166537067	0.984872111782105	0.344519967348063	2.85867933682667	0.00425408570971171	0.0574710532947739	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8154366151564	4.72731575978153
Merged-chr10-86731157-3	8.12457045422473	0	1.29038285850307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-78043444-4	4.53956127504352	0	1.3127429768055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3771636-4	5.94490413227777	0	1.30635607745139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75893710-1	5.57617898448527	0.628899620746736	0.787933896409565	0.798162921550257	0.424775951302154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90938988516912	2.50217563705456
Merged-chr5-33008674-2	6.56753313605659	-2.72352638256068	0.890682733335496	-3.05779631806873	0.00222971073381202	0.0352194047889002	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40604109960503	0.683637474991079
Merged-chr18-60989270-1	2.0527125925042	0	1.43864085249951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152841293-1	2.78927173929769	0	1.38136754536569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131105792-2	4.42082517510864	-0.53990070472009	1.20906664696336	-0.44654337796521	0.655204785944898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08776570511608	0.609949614787909
Merged-chrX-6352274-2	4.02881065393086	0	1.36467417598819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70009070-2	3.29431406344248	0	1.33547738659512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5833994-2	4.78311347145395	0	1.31037830017245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90216339-1	3.7684309656564	2.39930511770674	0.927787630305126	2.58604990984593	0.00970828717342237	0.108536530220277	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913467560099968	2.99059730437749
Merged-chr5-23598140-1	2.90417434331557	0	1.40010729664419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3488462-1	1.83124509513806	0	1.41352730294354	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133257109-1	1.92059244876197	-1.18514970093188	1.29647166282478	-0.914134674065801	0.360646084797454	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20864043015427	0.793480537552656
Merged-chr3-82333723-1	3.57422524997955	0	1.31396591547511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13599758-1	1.71257104770669	-1.74337594952997	1.34619121978794	-1.29504332215493	0.195305285148099	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35551535268006	0.306240821987646
Merged-chr7-89419127-1	2.04856949730046	0	1.39181554509875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56364449-2	2.99583727453461	0	1.33414418845608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108933976-1	2.0420276329948	0	1.47400834589105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37110695-2	2.49286700162656	0	1.4290236828455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152067970-1	2.90146922847627	0	1.3316538393927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129317623-2	3.94853932183962	-3.67831984026949	1.306905976915	-2.81452522617757	0.00488493435549934	0.0639701243275471	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18938698084585	0
Merged-chr19-56253548-1	2.77258688399417	0	1.37572939228077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131934756-2	4.48937938790065	0	1.3250166851456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81281408-1	3.15279319636704	0	1.33904660429887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110619692-1	2.18728907251936	0	1.34883350311679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80072511-1	3.6111478917846	0	1.33527758751694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5869013-1	3.18310601770617	0	1.39370694722096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3127910-1	2.60493821209732	0	1.36933679182206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32405184-1	3.04607368330102	-2.59288208004147	1.37181008961603	-1.89011737096002	0.0587422643736058	0.417599217554139	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81958319643989	0.306240821987646
Merged-chr5-91083228-1	1.49430835563261	0	1.71831697948345	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-39820240-1	2.25796655774969	0	1.45865164204092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107275047-1	3.44449474454321	-0.732684693830843	0.915005515391714	-0.800743472586809	0.423280169826799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49437003193719	1.72807534006943
Merged-chr6-134659528-6	16.944112032535	-0.998092652790637	0.374214670398648	-2.66716601924605	0.00764938747992044	0.089757025365933	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.82597157194462	3.56333566324011
Merged-chr17-33897323-8	16.9387418150018	0.0418483505454115	0.339005364922761	0.123444508186312	0.901755114132925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43158425102411	4.45744110522075
Merged-chr13-93179251-3	10.3506020669337	-4.30503345930844	0.875449702709871	-4.91751090437591	8.76515758471144e-07	7.26816275353377e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90337995767163	0.918668513615376
Merged-chr4-148675227-5	10.4929404421487	-0.58167292298199	0.638996234867596	-0.910291628091543	0.362668732510535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32951669992473	1.56763655772049
Merged-chr17-10822753-3	4.66212633282288	0	1.31472505658069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87045622-3	5.92058275847663	0	1.35144251493287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106386530-7	18.6603443521788	-0.733301078550361	0.49610368742016	-1.4781205968528	0.139375502023581	0.787108422369104	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38124199945468	2.30219722357347
Merged-chr5-92270669-5	17.4499005220495	0.953134997850752	0.374510621575249	2.54501459489111	0.0109273170891566	0.118771866684636	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1676428997814	5.02450807314785
Merged-chr5-103763161-2	4.40999562779725	0	1.31319016529016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140513605-4	5.66656692767934	0	1.33210691824921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121331931-1	4.69560935783517	-1.71956962311349	0.712793551384523	-2.41243712120208	0.015846270484923	0.156182562761354	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0685953337944	1.69453213775868
Merged-chr18-55391781-2	5.02369134674915	0	1.32168271746267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76033983-2	3.74541196480642	0	1.33227668106211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41767612-2	3.90919080978908	0	1.3311849336304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83593047-2	3.67398524756879	1.39310796266209	1.2312370924478	1.13147010531699	0.257857279047732	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.683637474991079
Merged-chr7-43397585-4	4.66389130863681	0	1.31157131300187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52458894-4	6.37587168783406	0	1.33955274829231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35222438-6	20.0144852886459	-0.49548043397711	0.554412797256263	-0.893703097095155	0.371480767871518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.57668368237471	4.04378097693708
Merged-chr2-128367991-4	5.1365929494695	2.84598001660265	1.18117370091128	2.40945088297086	0.0159765464101167	0.157173135439613	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.773587911294612
Merged-chr2-147023785-5	13.5622919507136	1.60057586721878	0.506413784778674	3.16060880514599	0.00157439790766308	0.0269462036862629	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64917784478265	4.15824037053039
Merged-chr13-74301349-2	3.53368823650031	0	1.34177826983232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9317490-7	19.3327364508456	0.80003164801328	0.344746398021442	2.32063816360315	0.0203063806576021	0.189428141613813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20659518093549	4.82322941724175
Merged-chr10-122799679-5	13.3502839357895	-1.86979289447132	0.48190948043727	-3.87996702778025	0.00010447062582583	0.00327578575586119	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78094822370874	2.18592518492757
Merged-chr8-71528081-3	10.91405390832	0.149391297771477	0.608257107741701	0.24560551100854	0.805987622724728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09732050792496	3.15900386199781
Merged-chr8-83757073-6	14.7439256263959	-1.22999030606245	0.451099844087174	-2.72664759738812	0.00639813304989019	0.0786923399732965	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44530725256768	2.5779073721314
Merged-chr2-16155378-3	4.94495876366499	0	1.34879806047458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9828819-3	3.03472683447215	0	1.47005043025728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-137141885-1	2.94759471779013	0	1.35077247955967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134234375-3	6.53590471669466	0	1.31774124915602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169921978-3	3.15787419157687	0	1.36643213239302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79417302-2	4.04088984524677	0	1.31705320425826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-5841577-4	10.47920586363	-0.151418551909214	0.4406691126601	-0.34361054033303	0.731139196831187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18255959165487	3.67004393940231
Merged-chr13-112674256-4	12.2676070186354	0.165442898302049	0.46833990095588	0.353253903766006	0.723898100021812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73973393120553	3.65874770470116
Merged-chr15-77542028-4	15.2363768128699	0.280069123402257	0.336696418436373	0.831814976538523	0.405513389051097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43899801871934	4.74412714240477
Merged-chr4-154946535-3	5.2813655570456	0	1.33220642796899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5002280-2	4.15461484342859	0	1.34314251012701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116894039-4	5.50022835681051	0	1.31252787166428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86823007-4	7.35276558626343	0	1.29597860899042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19716053-3	4.90852235295003	0	1.31258433827307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94965241-3	5.30858907046538	0	1.32680574389942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117853551-4	10.5267361961986	-0.497660046905597	0.481766399508226	-1.03299036091682	0.301608409551026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91083706536311	3.35979880313945
Merged-chr10-88351893-4	5.16411942876251	0	1.2938587251826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126693364-6	22.6052627326427	-0.882575630027131	0.377693993278908	-2.33674785867032	0.0194522984510803	0.183397762889091	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05475363942366	4.08205217853582
Merged-chr13-37594598-1	4.92955956795431	-0.681502829947124	1.1602211818406	-0.587390439524618	0.556941513257597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09593933824148	0.803125334851723
Merged-chr3-36060302-2	4.00953460133076	0	1.31661798052918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22012277-2	2.17869542663094	0	1.58988050403486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24053944-2	6.54823088683418	-0.70402322750813	0.77364803725253	-0.91000454161086	0.362820114651593	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78093469458707	2.59864907237737
Merged-chr4-102290427-1	2.32737945491895	0	1.3822613685151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120243365-2	2.70098597399142	0	1.40169839183428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62244906-1	2.98834577142724	0	1.46010195949288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41674536-2	2.14524910054525	0	1.44936776790852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59078094-2	2.29889226588789	0	1.40048600473172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134132546-1	3.63082659792583	-4.15754481190569	1.22918142664241	-3.38236872262404	0.000718636161448997	0.0146193022090924	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15304839783586	0.420961122473315
Merged-chr18-53934449-1	4.80506458382397	-0.121660821001995	0.954240339866121	-0.127494946418912	0.898548672716636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81539260977477	1.66014775609343
Merged-chr3-127853495-2	5.49503296708887	-3.46775672164048	1.10653362448204	-3.13389186276532	0.00172504415168928	0.02891860829561	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75808994902764	0.420961122473315
Merged-chr18-57800414-5	10.3440464558737	2.70821969596449	0.984553216720654	2.75070930648626	0.00594663879884503	0.0743000112713818	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.99170652413272
Merged-chr11-93861447-6	11.4142728512462	0.05756867435877	0.581487332433155	0.0990024565417128	0.921136319650341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45065269017449	3.56075806381015
Merged-chr13-45889155-1	2.59876902813196	0	1.34899031235542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34539628-2	3.15851049522861	0	1.35629027600888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-11352976-2	4.69270888718142	0	1.38348316652635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130820002-2	2.2948924064836	0	1.36767138035603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98945203-2	10.6069068893173	-1.92706435162261	0.619495889704274	-3.11069755853025	0.00186645997231504	0.0307838701037099	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.76467421693742	2.4885037243069
Merged-chr2-49734606-4	6.05574277680321	0	1.3040090613389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163758368-3	9.42570074758676	0.0609104375705407	0.682939048451071	0.0891886877880063	0.928931955386603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46398054903696	1.7852714664239
Merged-chr17-43550188-4	5.47516297000823	0	1.30263039831943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161512337-6	12.464727246921	-0.758582661212198	0.540408890833761	-1.40371980194817	0.160402303436357	0.869485601024654	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66606545132213	2.28055475498378
Merged-chr7-24890644-3	4.84388905560146	0	1.31807218027848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13336079-3	7.29997597196819	0	1.29750204866536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30646854-2	6.51943917719477	1.40366294563255	1.18241616333449	1.18711413896282	0.235182602026908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0.733321818366247
Merged-chr4-141425882-3	3.99336426518765	0	1.32068082726538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27291598-3	6.564612555636	0	1.3327391618801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63824236-1	2.5574251199086	0	1.33890419570817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80346402-1	2.05168032619687	0	1.38141255973246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121281065-4	7.65630939195587	0	1.29805382801794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154943288-5	18.1119459478001	-0.457212709104552	0.33843452789566	-1.35096354366512	0.176707111175738	0.931743959242294	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22945777728083	4.76656998989929
Merged-chr6-116108159-3	5.19820423662146	0	1.32849877399056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136630264-3	9.51071383369176	-1.24034210364853	0.7454287689099	-1.66393108956927	0.096126201226483	0.601672676757256	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66125126765683	1.0991499147123
Merged-chr13-80960026-2	4.06337222153855	0	1.32010717931687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62466513-4	3.9515462807737	0	1.43949914816829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100868732-1	2.68889838850205	0	1.35774278920889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32379711-6	11.6936102860517	-1.86350408442298	0.632420203798434	-2.94662326287242	0.00321264347984603	0.0467037599185803	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76251138791908	1.26428495695095
Merged-chr11-106796871-4	5.18295041804283	0	1.33154670285759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86723303-1	4.44332042941497	1.79938964823086	1.17835602036975	1.52703394994854	0.126752569486942	0.737496004592002	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.10669213789164
Merged-chr8-77535207-2	4.52044005619159	0	1.30860836561125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115269811-3	4.31912428873526	0	1.33418416266399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45457552-3	6.48757844881477	1.1679001173628	0.995925745662356	1.17267790540555	0.240924994935183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	1.47971361857133
Merged-chr9-57723387-3	4.43397825996138	0	1.32162682816571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34588399-3	7.45554086800833	0	1.30283619084521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64081476-3	3.78087783562264	0	1.32152102189133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22090531-2	3.82818367466964	0	1.32309774804342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90013469-2	3.56194448858762	0	1.36452093730039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121370958-2	4.49180505788255	0	1.34058137508481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133449874-4	15.4417931258523	-0.102039985783137	0.39315007782666	-0.259544615499546	0.795215062837071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.03212141146363	4.94011714581195
Merged-chr7-128320628-4	5.32181121243185	0	1.32913089107682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134578158-2	3.89889488367565	-1.76471457177962	0.802910536967167	-2.19789688954073	0.0279564546189452	0.242732811445425	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52325577418097	1.75485430327507
Merged-chr2-148500619-4	8.90991034456189	0	1.30391019924224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73000051-6	10.3740387176494	0.219850379994619	0.602272874394312	0.365034504028952	0.715085650288841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89110449715058	2.75399729942732
Merged-chr4-105275358-4	5.54792859553117	0	1.34177016663313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22841647-1	2.75044213967361	0	1.37299748897684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63133992-1	1.88424959651726	0	1.47362974947872	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126551959-1	1.84971505167409	0	1.45124825358432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139570945-2	5.78559572642468	2.27263341393968	0.917175272967666	2.47786162680358	0.013217239331019	0.136638778883842	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	2.34327250745675
Merged-chr6-113039801-1	1.66330277562668	0	1.47869894503184	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91032557-1	2.576167313262	0	1.39662388029666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78374857-1	1.71745459045591	0	1.56868969085437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-13756584-1	2.88924603003982	0	1.38206260536213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39520255-1	1.82577107980429	0	1.50209415984326	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118362639-2	4.16627304770899	0	1.34645951702559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97764699-2	3.79229203334233	0	1.36733092401321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78523811-1	1.79356181390995	-0.42757223170493	1.45313059511356	-0.294242123276963	0.768572894819657	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr4-12538762-1	1.87091113439241	0	1.45728463318666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87634417-4	4.69678503834194	0	1.33170695301941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29894027-2	3.99712325638001	0	1.36038512105211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28050165-2	3.74902756726366	0	1.33454433608917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149624017-2	2.54340971767102	0	1.38236937075918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26859474-1	1.04809810020944	0	1.67969468950424	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96941387-3	3.56077102299445	0	1.34132888361359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95046091-1	2.67954380531284	0	1.51389589565659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100393195-1	3.15009172215792	-1.78158822291698	1.20284211466604	-1.48114885669065	0.1385669111568	0.784236391516735	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84775212222981	1.07982873328226
Merged-chr6-127237414-1	2.73107142443715	0	1.39684477702261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83198142-2	2.89807360822753	0	1.35208873979149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-33115024-1	3.06123347915635	1.09297459829718	1.00549060490334	1.08700627630654	0.277034035937963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55633109488055	2.35831708478863
Merged-chr5-99216413-1	4.09878134807131	0	1.35303119720587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125127995-1	5.35214465339754	-0.848430639446789	0.910168354500706	-0.932168906171447	0.351249241944548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05540785609508	1.29606516661881
Merged-chr2-153144451-1	1.70604493373192	0	1.45099354806983	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9463492-1	4.13247687326128	0.338419433544269	0.768240868803979	0.440512145716917	0.659566217469946	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30554714262123	3.55963722005284
Merged-chr7-88344121-1	3.69689505942194	2.45247237234913	1.27334359465188	1.92600990231518	0.0541031374133607	0.392391086108303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr5-67256656-1	2.2912814272519	2.19630496266867	1.36436691620169	1.60976122814752	0.10744999248759	0.655228369642968	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.47126464988938
Merged-chr9-55117484-2	2.48608751075419	0	1.45736101684414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45664183-1	2.78422598861006	0.832088789326146	1.13551098250104	0.732787971361948	0.463687758867485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0816146567097	1.37490486545505
Merged-chr5-65096236-2	4.65835511584284	0	1.34037005997747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23976386-2	2.74658588168049	0	1.39024421278656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115497104-1	4.79422678408082	-0.495161464918973	0.587814550334564	-0.842377012677118	0.399576955860614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55216838853005	3.0861950770416
Merged-chr9-63132267-1	2.66430954338976	0	1.36654258884398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131218473-1	3.52544641071781	0	1.33360302606758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41371032-6	14.9917214274282	-0.973078118429855	0.504453592036289	-1.92897450586466	0.0537340272535234	0.39070921830519	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94597003372458	3.20213796229157
Merged-chr17-71254892-6	19.7839789867531	-0.545094970667953	0.393396110932746	-1.38561352163733	0.165864947125501	0.88943138313335	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.00926949921029	4.40930250883804
Merged-chr1-53791928-4	7.05785880749486	0	1.29696647879423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18423735-5	12.7611778306685	-0.541899798438013	0.49977039736797	-1.08429751200134	0.27823290808731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49750657456231	2.95646512821198
Merged-chr2-173546513-5	15.5322792502149	-1.73874806835478	0.411875028212447	-4.22154282064879	2.42635848917775e-05	0.00102814595420012	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92342854242452	3.07293432132396
Merged-chr3-148961080-7	16.7895862606967	0.285233061899619	0.441456630920059	0.646117969289878	0.518202958911596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55007384503679	3.78908037547275
Merged-chr4-154968213-5	13.6981813303048	1.40090606636478	0.60729635326837	2.30679150109389	0.0210664462761828	0.195025543217192	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47723380223568	4.21829401668196
Merged-chr5-101909721-3	6.77536045674332	0	1.34170263625991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118468284-3	7.04573185787996	1.32313053816905	1.0614668291968	1.24651143283512	0.212576694559846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	1.03956264035389
Merged-chr9-63933235-3	4.25511481525741	0	1.32041522261457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70005314-5	12.1599809847689	1.1239685188898	0.571241255341063	1.96758989022726	0.0491152439016945	0.366170533713649	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84718541632286	4.29348392689366
Merged-chr7-114291690-3	14.1447006232056	1.77792377204891	0.611526913744374	2.90735163422767	0.00364503206916586	0.0511243326017842	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85822149567498	3.63957126940493
Merged-chr17-69265446-3	5.92347078111218	0	1.30614518436246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111912531-3	6.97259835521734	0	1.30396090969991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136721961-4	18.3184990648153	0.0888886936514553	0.416591015532051	0.213371605093141	0.831037126388105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80217098028341	4.73368358034169
Merged-chr3-85604577-2	4.62889826099943	0	1.3173340880443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23431131-4	6.78713531359767	0	1.30941031666785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99791024-1	4.76961412485089	0	1.4078566206146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10025462-2	10.3835375552187	-1.5999597563047	0.84835122073147	-1.88596387581687	0.0592998227757443	0.420004162562171	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39543427831422	0.926147595614233
Merged-chr8-23028228-9	28.0262136292593	-2.14724573412115	0.535233829778721	-4.01179001523293	6.02600893330999e-05	0.00212277940569312	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25791765285054	1.52944205045577
Merged-chr17-87286265-2	4.52070383502429	0	1.31346267222466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102666949-3	4.76187395157815	0	1.31709069741487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61017784-6	18.2299219147474	0.454453594935696	0.411075450299242	1.10552355925141	0.268932791740514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6331434533858	3.35480191521101
Merged-chr18-30365820-4	5.19618009942746	0	1.31308789517197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31071014-5	13.4122358435294	0.120815549093401	0.392733562585414	0.307627258281816	0.758365976290899	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73043317235554	3.86434701035327
Merged-chr8-66400224-4	5.07858758840293	0	1.30544803837378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120098590-4	5.32479897419997	-1.50204618047024	1.17715646908537	-1.27599534974081	0.201957162954063	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	0
Merged-chr7-19253878-2	3.90503379159924	0	1.33262425828245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117307230-2	4.29879037633525	0	1.32290451326164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172464372-2	5.56505453708426	-2.81818892647423	0.987188676291304	-2.85476220924826	0.0043069062608722	0.0580286796954546	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25571107745478	0.683637474991079
Merged-chr6-129501160-4	11.0918286934059	1.21630971034213	0.507721893114887	2.39562194744063	0.0165921938816362	0.161995144388077	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33153873095958	4.56762242609698
Merged-chr11-115178027-6	15.0877162609015	0.468276936199606	0.471930866674927	0.992257487837011	0.32107193556985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42546318588469	4.83939051598093
Merged-chr10-68137664-5	9.4256220284369	-3.69571684170061	0.870493007751527	-4.24554454635609	2.18063178806027e-05	0.000941692773132418	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29961528614754	0.581381506691384
Merged-chr2-35475068-4	7.10238422718627	0	1.32167355669533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85933402-4	5.38618278672597	0	1.31874854641502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135282916-3	5.0846285285064	0	1.33296456652729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131196722-4	5.3467725902408	0	1.30060664457087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52888332-1	4.45756234442197	2.57645395653674	1.19920348012654	2.14847104701937	0.031676354041329	0.266880225784514	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	2.31205403547308
Merged-chr2-68886283-2	2.98080136856203	0	1.37176309374477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64243365-3	3.80375754623146	0	1.3579783861789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80175560-3	5.36771404252341	3.25268603192217	1.05771257948501	3.07520785420353	0.00210355898562722	0.0336744648394895	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.88903407179563
Merged-chr3-58511802-1	2.56592605562893	0	1.42373431260368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8866369-1	3.55727299067414	0	1.33828078551547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101812716-1	3.56069451244508	0	1.31527260684989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121824808-2	7.63287686270304	-2.34403686037856	0.641545106674988	-3.65373663673826	0.000258451370211991	0.00665375628431034	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73565283191369	2.58877250519002
Merged-chr13-5779029-2	4.26045030840768	0	1.31082007698213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34052254-2	3.58892213295438	-3.33604025465076	1.17727951133802	-2.83368581761797	0.00460145472556036	0.0610779322560364	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35531438089385	0
Merged-chr1-23189519-1	2.4818994738957	0	1.37592754659968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41284911-2	4.24796466258572	-3.70019197081845	1.15525772092623	-3.20291472958242	0.00136044256351815	0.0240575299007886	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32869332833778	0
Merged-chr7-88252270-2	7.85792184751647	0	1.29506459669464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90800740-1	2.12033195037965	0	1.40130679083006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169089125-1	1.9367563832793	0	1.42198615826742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93793361-1	2.66438832969441	0.0969669841535697	1.35526130435317	0.0715485521811231	0.94296118448635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr5-145119632-3	5.08567728678099	0	1.31923230357579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-170005297-1	3.55132771224156	0	1.34515424949006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135073823-2	4.52385094050801	-0.492029754205163	0.75517018756138	-0.651548170610444	0.514692692383592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5083923223738	2.60016286176753
Merged-chr7-83568765-3	6.09667102694532	0	1.33276461753176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19377349-3	6.65518109463663	-0.156980807994094	0.826173124447623	-0.190009579528565	0.849301623904255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57284570008867	0.793480537552656
Merged-chr5-43883826-4	10.4739588433815	0.115685858816834	0.572615518715703	0.202030603495171	0.839892799328122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73051734670958	2.71797405654368
Merged-chr3-97661414-3	4.6650679963317	0	1.33969286352621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-20961474-3	4.37781878799878	0	1.35862097807971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6011829-2	3.94396329390949	0	1.30157005639936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114885389-2	6.3273230422772	0	1.32152821636521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93984768-5	16.8800570904604	3.24438941452236	0.718717268923586	4.51413866732525	6.35746117665853e-06	0.000352361881297649	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.873092966476886	3.19467172030591
Merged-chr17-63873646-4	5.9673040019007	0	1.31389633052717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55513038-5	12.8518480216507	-0.352016168968159	0.517559537378695	-0.680146231583384	0.496411873746499	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51556200779924	2.65649780813402
Merged-chr8-46765219-8	18.9856725786596	0	1.28777042886667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105922788-1	4.99917776843941	3.12764947222362	1.14600995419662	2.72916431551956	0.00634950571122883	0.0782710432382492	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr10-128913445-4	4.95625062688473	0	1.29993167022517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-5268057-3	7.09019728605168	0	1.31169535650293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85787351-1	2.16113223866805	-4.52515021687152	1.30247384588745	-3.47427338457479	0.000512238844244322	0.0111836817627763	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89616647818732	0
Merged-chr2-83682847-4	15.0987821860443	-0.539736865123842	0.609823571583081	-0.885070519203945	0.376118598520794	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35829008675237	1.86684104340128
Merged-chr16-44772740-4	4.7882331857282	0	1.33280280678895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109062033-2	4.15357250183933	0	1.33704687707732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-52712511-2	3.40804369414712	0	1.34007950199141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107114097-1	2.96407220281742	0	1.32802893151071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162366471-1	5.25118075008208	-1.78205892735431	0.783856727192941	-2.27344980980901	0.0229990874163707	0.209026198374153	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6635666036507	2.02938698498506
Merged-chr16-76380353-4	5.50853828059173	0	1.31112641232352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65674698-2	5.20363471278876	-0.303022228660506	0.645366749809703	-0.469534925296132	0.638687326795422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78724184015594	2.95988517553914
Merged-chr15-98994095-3	4.53945329370143	0	1.37108556126335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145096976-2	5.6458608539976	0	1.33313724110316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116195446-4	8.39753442402911	0	1.29221625312344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31376131-3	5.22089957140087	0	1.30444316711546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4446051-5	7.40662533031107	0	1.32525219589393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37430088-2	4.6453014533848	0	1.31535151348897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-31034124-3	7.1036209178553	0	1.34520000518195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156581454-3	10.8721641441486	-1.02384155059641	0.588518595360745	-1.73969277889822	0.0819129779891356	0.534146837608827	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75180351405157	2.91297957653829
Merged-chr10-78600106-3	3.9952276956246	0	1.38176041521659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3829966-2	3.23826245467014	0	1.31878463291664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94069656-1	1.3501369408665	0	1.45995223342172	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50904066-3	5.60715958488004	3.39875112078631	1.18071215265249	2.87856029359141	0.00399494907261569	0.0549583748287604	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.905469781553611
Merged-chr7-122949427-1	1.30569182358382	0	1.86006275490159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113772143-1	1.83959233158146	0	1.550823139914	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122861023-1	2.39563328684116	-1.20936407947555	1.39863594804948	-0.864673956909308	0.387217767468152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	0
Merged-chr8-11335407-3	3.42077572151573	0	1.35754809899595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34692544-1	3.08313651784306	0.657826901569943	0.988045636049268	0.665785949118995	0.505547927170888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70496657532395	2.36453465698696
Merged-chr7-89441299-1	3.77735932019722	0	1.35330785636718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46143313-1	1.72054647554769	0	1.45960604575547	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77191265-2	8.76341848365488	-0.509912206485586	0.703454764009655	-0.724868509780378	0.468532701193732	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7150979167014	1.94036587464633
Merged-chr2-117801468-2	7.45228259971819	-1.1743544038279	0.724536057676764	-1.62083638403516	0.105052733139612	0.644519378437809	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87172341454567	1.98002631528474
Merged-chr16-84327451-1	3.52595514130746	1.01872830178437	1.20958242820997	0.842214865250617	0.399667694509499	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0230481607689	2.16286647593625
Merged-chr2-167222353-2	5.4856831952933	0	1.3034955632662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74016977-1	1.68379106245329	0	1.54037164366166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102415433-2	9.79825177739915	-0.893518693220519	0.578141729395247	-1.54550112505313	0.122225096981498	0.719283248140578	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87188246603413	4.09488509733717
Merged-chr1-191445626-3	5.0197062952994	-1.74622832176001	1.16525686736164	-1.49857801371624	0.133983140017529	0.765721730591694	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.950204084877437	0
Merged-chr1-138127325-1	2.98506851220045	0	1.35407598778071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128698391-1	2.44317883581385	0	1.35343862791083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-14115436-1	1.22449805096778	0	1.61939405112148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22519925-1	2.37194493343086	0	1.39688515003929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87027423-1	4.98011320822821	-0.769408794123686	0.753490523233334	-1.0211260399428	0.307194727330215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76393127214292	2.81733431498626
Merged-chr12-41313602-4	6.43924946625383	0	1.30746716203895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83908868-1	2.86798712418562	-0.699442804739612	1.17040907127724	-0.597605420108653	0.550103246817893	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78168567759511	1.03956264035389
Merged-chr14-66242472-1	4.21943864734294	0	1.32235667849022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21522840-1	3.97940494556573	-0.320671929968665	0.957192583839489	-0.335012969576495	0.737615302687958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80553360685825	2.39577521289854
Merged-chr7-64011421-2	2.67598564599016	0	1.37247965874572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124767330-1	5.26387887034686	-0.447455045687931	0.801340580857082	-0.558383109974726	0.576582803735646	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49680107876483	3.16637160312171
Merged-chr12-55484256-1	4.85385894725525	0	1.43259522207167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111172935-1	3.28489071869786	0	1.36296891166512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35951265-1	2.88150820134975	0	1.35405188813423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73451531-1	2.30970100773976	0	1.42647852756007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149355956-1	2.07037484072282	0	1.5305441278324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31857852-1	3.06606638402522	0	1.37783079460511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96488198-1	1.46764163326764	0	1.66473898004978	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23401812-3	5.67626641778941	0	1.3099303691816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27989936-2	3.8964461752372	0	1.31614179835608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7581291-2	3.83585697429283	0	1.30350875852611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39610487-1	3.70110552135161	0.72652057877584	0.849515444545662	0.855217622517032	0.392430682045378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0425828912036	1.93871841517079
Merged-chr16-70387645-2	5.16980028397395	0.206318333093288	0.671789809129631	0.307117390423939	0.758754021307322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26687746023123	2.83669714167523
Merged-chr5-9107997-2	3.03305694097969	0	1.43032644092397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-18794624-3	5.94257723488761	0	1.29203851260204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102422790-3	5.82741280032162	0.0633461775273516	0.942448577566268	0.0672144656326328	0.946410969258198	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.983047685808099	1.15307255889252
Merged-chr6-129491479-2	8.59454912721957	2.26657496631279	0.607306014744841	3.7321793482732	0.000189830262177597	0.00524731316085333	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4425760743381	4.00022774159124
Merged-chr14-121931613-1	5.91627049564155	0.667219318043227	1.0207934449899	0.653628137325887	0.513351411841716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84938952377291	2.38343055397873
Merged-chr13-111771406-4	12.5300729616896	-0.558819760981654	0.509699184290131	-1.09637169963286	0.272916143604495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19387511549012	3.80283898749574
Merged-chr3-90472398-3	5.63097892469231	0	1.31548398798981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55813010-3	5.15085765151546	0	1.34016920992219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121215713-4	9.049157075131	0.885583413061895	0.602279293656132	1.47038661695634	0.141457073897453	0.795685576768687	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28802274941102	3.32390248490471
Merged-chr2-129403196-3	9.52525755698688	0.681266465730989	0.668423769600463	1.01921340430219	0.308101664349294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40598021899155	3.89292226578911
Merged-chr10-116572159-4	6.61760964105392	0	1.30645918690464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121340530-3	7.24648801793344	-1.11947070481896	0.649475874664288	-1.72365248423987	0.0847705976584236	0.547373465868315	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97004914531852	2.33920846102772
Merged-chr1-125519292-2	6.16743403489279	0	1.29300895726677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95949427-3	9.89093774637719	0.864045159108079	0.565796227739478	1.52713135356203	0.126728351848118	0.737496004592002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59439485609312	3.62203080589585
Merged-chr19-34284632-6	18.8319290671738	-0.199769426640183	0.439816385560964	-0.454210968937383	0.649676988871209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21268214223939	3.21307634533781
Merged-chr2-35135698-2	4.8187071428767	0	1.32727123080521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62232768-7	22.3369073012058	-0.234877829687776	0.387817731975862	-0.605639738263425	0.54475400837549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63411159094567	4.25478020201639
Merged-chr13-45904819-2	3.51759850727533	0	1.34645427883227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37954484-2	4.78293370202535	0	1.3250953426918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23782515-2	6.38899783642666	-2.62122737692441	0.784834791502493	-3.33984604824452	0.000838248444773225	0.0165486957317677	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1461935440734	0.905469781553611
Merged-chr3-94997115-4	5.35168093675416	0	1.30546137926951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78138448-3	4.23511580310079	0	1.30657204867881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111219830-2	7.68617058630722	3.3256095304351	0.754361991967975	4.40850621564227	1.04086033766755e-05	0.000521995852841317	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785754803793435	3.85698782037262
Merged-chr9-37421399-1	2.19083955559076	0	1.35639285989648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74880228-3	4.28385894831638	0	1.32964361079561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145198431-6	16.2970878386993	-2.55349135014249	0.63510007467446	-4.02061258054703	5.8047000409837e-05	0.00205590205353995	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09165588533744	1.69181239031707
Merged-chr10-70261212-3	3.06471031971937	0	1.3592211333206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9424080-3	4.1331625078796	0	1.39988013967613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24021893-1	6.0588944732713	2.51475878722651	0.879658677142717	2.85878926971412	0.00425261183055362	0.0574630216458555	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.866762985398991	2.40782748329714
Merged-chr10-37979160-2	5.71316501170997	0	1.31240954197793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47215696-6	15.5324377053996	-0.456534039010758	0.474997860804101	-0.961128621164554	0.336487500403788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41807697251704	3.45925595033179
Merged-chr17-47261169-3	6.59664927844671	-1.57605305308968	0.710125515390924	-2.21940068189504	0.0264594773156617	0.232551580991154	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45493871975572	1.47954504644696
Merged-chr2-102764966-6	17.5636603643408	-1.39334041664482	0.786352229323559	-1.77190368983045	0.0764105458223628	0.507987095264862	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40964837834924	0.735627456805112
Merged-chr1-80635829-4	7.85574858266537	0	1.29427867752806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38846593-6	12.0429765294481	0.613195071658593	0.479567327943918	1.27864230094153	0.201023046692715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7359181435405	4.2428258157732
Merged-chr8-90881045-5	10.8574864593811	1.62107618071846	0.565485289314988	2.8666991190561	0.00414777142387296	0.0564902608304299	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65398059837731	4.38845792821851
Merged-chr8-83217627-2	6.47078808186567	-2.72298086529937	0.87288912646658	-3.11950370641216	0.00181155981713854	0.0300681198401664	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35755996865382	0.683637474991079
Merged-chr7-101821776-2	3.93122976878285	0	1.31268588654304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118424772-3	6.932120165638	0	1.32010807339987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29248597-3	7.19120073978055	0	1.35432425519793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9829248-6	11.6562275947839	-0.55547652502956	0.429788645007424	-1.29244113701507	0.19620441833054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08972405574225	3.58483167389273
Merged-chr12-73537923-4	5.30310291223731	0	1.30839452397513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24173590-5	9.12374543964054	-0.390830738012008	0.585005689996056	-0.668080233569426	0.504082378546482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9387485882344	2.72525188647403
Merged-chr13-42331313-3	4.61102657282147	0	1.30822595632939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99180034-1	8.14194298928346	-0.299881721217699	0.640391334566367	-0.468278855491948	0.639585187269547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80188217142706	2.52754339325281
Merged-chr19-46698350-4	7.8922080000446	0	1.29830412176221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122152295-2	6.04376534791494	-1.47340134301645	0.79456195557431	-1.85435677190393	0.0636881349497746	0.443429977580682	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87819032158324	0.793480537552656
Merged-chr2-46442169-3	5.57573787812498	0	1.3064420000958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102299456-2	3.08602990807032	0	1.36157480003342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79059780-2	7.60641661217903	-2.04109087566295	1.19651376431528	-1.70586493572934	0.0880332295594778	0.562658393856968	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91448323246428	0.469435083901436
Merged-chr19-29571284-2	2.75019629244992	0	1.37396164799123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105650525-1	5.97201800160865	2.46271765524461	0.736348464517791	3.34450029288424	0.000824309426417018	0.0163277153790927	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4968645533915	3.54778655475487
Merged-chr12-12274535-2	3.90289078243685	0	1.37864277383569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99330235-1	3.10967281948854	0	1.35338926269587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113352755-1	3.17379322051151	0	1.32532728281242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83743697-2	1.84930430568095	0	1.49440712216998	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24149556-2	2.68623691658132	0	1.44042999186227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8717198-2	2.65123386156123	0	1.61119317438782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-30936283-2	6.48664571621301	2.27893958751542	0.903375231344799	2.52269434498764	0.011645957806107	0.124540816175192	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	2.45639377467255
Merged-chr9-50958237-2	2.24632483160157	0	1.58674759269396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25121716-2	3.31796835101557	0	1.45157820159142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35462361-2	9.22238975227521	0.629507360250509	0.540171144952175	1.16538501942055	0.243863178426166	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.791003913899	4.42984543443555
Merged-chr10-98754469-1	2.36338132101474	0	1.32848798110146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100664110-5	10.0780957682193	0.158565303921468	0.613370964385819	0.258514525675734	0.796009839964025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69555798694489	2.89417081547303
Merged-chr10-13201048-6	11.9736429953357	0.217021683138777	0.537966691697005	0.403411003856365	0.686645893050915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5371668352558	3.28046562910414
Merged-chr8-121927538-6	15.7578075703696	-0.320786654736895	0.348638967187552	-0.920111304036552	0.357514597766723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62139616747504	4.10395472324288
Merged-chr10-57001550-4	6.2170059260544	0	1.29272218862063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103419280-7	27.6346330005114	0.517175466744314	0.359053395028228	1.44038595346983	0.149758235480421	0.828277753339278	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22597080975915	4.47887680448886
Merged-chrX-157617348-1	5.38296691366307	-0.386732783809355	0.537102980156718	-0.720034701160125	0.471503630233644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90342639807525	3.48910686631238
Merged-chr15-59760311-3	6.04145410516245	0	1.29231825775098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46479490-4	5.80283653762703	0	1.30191325288666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46589367-5	13.1105772012122	0.210974292583156	0.462145639853549	0.45651040362517	0.648022991346207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23492422348835	3.31160775607576
Merged-chr2-33047061-4	5.9365431880766	0	1.31213794979894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59976575-3	7.78800405366627	0	1.29965953155508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148114943-4	5.44856033985563	0	1.3097216807859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33568753-2	4.90457157351181	0	1.34882666481669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24481774-5	9.36198797918354	0.081780915678749	0.536106877476821	0.152545917828269	0.878756376991431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83071267956654	2.86504561970254
Merged-chr14-56689396-1	3.9735011416096	0	1.3248443354829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45703480-3	9.08336494602158	2.0335709147838	0.808678655443973	2.51468355334215	0.0119139266693563	0.1266126358068	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	1.83161737716784
Merged-chr10-121509629-1	5.41908315501722	-0.249727757221067	0.630859124343837	-0.395853444270638	0.692213147541411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73693333365218	2.96592492512468
Merged-chr4_JH584295_random-1859-1	1.6533596000562	0	2.13911624396602	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10411234-3	8.32742518057178	-0.30102974449722	0.745211834146886	-0.403951910991641	0.686248082102721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54111641048444	1.27911570690487
Merged-chr18-75902296-3	11.2532717974716	0.820567004070944	0.689544598896859	1.19001295258305	0.234041301189288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90382724121824	1.90439599219281
Merged-chr17-81705392-2	3.99563845923206	0	1.33951167918835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35214942-3	5.2005046167654	0	1.30137962436889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171183606-6	16.4161370167259	-0.368198223020306	0.399185417085851	-0.922373932665779	0.356333561929203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11963497059218	3.75385742160321
Merged-chr17-78688163-4	14.1013132259593	0.352224231826292	0.511812799396235	0.688189572909855	0.49133340931312	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00365112288053	3.65177463970556
Merged-chr2-166732386-4	4.95300762164828	0	1.30044761714362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-51470980-2	3.14568310424331	0	1.37015141503478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152214273-2	3.55863094986147	0	1.32678736639992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172612497-2	5.52017848485272	-3.58491650712343	1.04827973569586	-3.41980903097751	0.000626651105113358	0.0131121175519492	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92983533085919	0.581381506691384
Merged-chr12-52283796-2	3.30450340649727	0	1.34784851047808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93485499-6	13.1809538184223	0.76656955414225	0.483533132335096	1.58535062621315	0.112886692474489	0.679003479974039	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46788312296594	3.4094069118418
Merged-chr13-110616485-3	6.45190540687583	-3.34715394459382	0.900783921931997	-3.71582336573555	0.000202543045372372	0.00552124210576205	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96617119644033	0.683637474991079
Merged-chr10-77917118-3	4.75586478079575	0	1.30108711928335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53180688-2	4.27410638813369	0	1.33107116024688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91090424-4	8.66634322415183	-0.00196476547160138	0.527934926448808	-0.00372160539712254	0.997030595366784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04656828498419	3.04144112810011
Merged-chr5-117396611-2	6.27251005496661	1.90346174017859	0.73605837978752	2.5860200664084	0.00970912779401007	0.108536530220277	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.965778310220472	2.68333779073552
Merged-chr17-29922337-1	5.53844446277088	-2.56110565296476	0.829859407847519	-3.0861922257503	0.00202737709814083	0.0327436934886581	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81741703100091	1.20539659680455
Merged-chr17-31002775-2	4.25256913451246	0	1.30146927647868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80801519-2	3.74258211750823	0	1.33810929966336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44316637-6	12.7726744559237	0.363708388340863	0.424302434549306	0.85719137748336	0.391339126992129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62601368818152	3.84981514344496
Merged-chr10-118081307-7	26.8566573247667	1.30824399119998	0.548396817363854	2.3855791094644	0.0170522543981617	0.165399527371571	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74074136738142	4.93883980555255
Merged-chr17-84128488-3	7.15643317484574	0	1.30124707861727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100465763-2	8.51042179121825	0.118329280096569	1.31246367164494	0.0901581374425889	0.928161550277574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr2-166654235-4	5.8713684708557	0	1.30363294695446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64341227-5	9.18782000069817	-1.17076438347731	0.818952112504119	-1.429588330748	0.152835206676441	0.841024792882419	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03507842988418	1.08186277552917
Merged-chr10-94829575-4	4.8515327374344	0	1.30526522209335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-111687840-3	5.77209943080182	0	1.33108099561849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63282724-1	4.39206663604818	1.81763847622895	1.16051664616134	1.56623214517532	0.117294279806898	0.698570179389498	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41057690858949	3.09984832661085
Merged-chr16-34738878-1	1.79823628245902	0	1.48955472051994	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39309501-3	7.13598195067438	-0.409369084744652	0.549649143107488	-0.744782539694775	0.456403191827776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86866967340822	3.41861345969732
Merged-chr11-18927568-1	2.16630145070961	0	1.40317870862628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159672687-1	1.64167580229882	0	1.43592952644823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25525579-2	3.34451091536647	0	1.33373428271314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20163757-2	3.37347368071826	0	1.36840156511872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-15853293-3	10.3243600613918	0	1.34052798276454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45393231-1	3.87044040505115	3.34341968726464	1.18195924766281	2.82870978324835	0.00467360592680375	0.0618346735964603	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr8-27058014-1	1.69439064595625	0	1.52183474588007	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12139379-1	1.32091638701506	0	1.49997874863996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-68695950-1	4.186088883077	0	1.32904838949953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13497340-3	5.27109152347099	0	1.33278824900838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143642356-2	3.23103096700673	0	1.95264355522372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70818044-2	5.18101096777186	0	1.30832221676362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-77559018-1	2.84937593313283	-1.79841084181715	1.05048168154324	-1.71198686603953	0.0868990889001127	0.557426903236161	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75964797660923	0.793480537552656
Merged-chr3-78314548-2	3.58052929133602	0	1.37671346969095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29806477-1	4.39122644686187	3.68944529915995	1.17478264678121	3.1405343867384	0.00168639908621648	0.028394597961325	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.34106889333198
Merged-chr6-97406523-1	1.74325703247856	0	1.43062022862841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110727865-1	1.36338463347824	0	1.49352536350766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70963692-5	9.83362065467619	-2.89068021575061	0.906379959769187	-3.18925874804948	0.00142638142287775	0.0249620568985991	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5058859140723	0.581381506691384
Merged-chr3-89941787-1	2.19774317636328	0	1.47352782552871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56677363-1	1.17529369533139	0	1.49990817753706	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37249670-2	3.33060159419466	0	1.33611113795943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121612172-1	2.66186613802715	-1.06958351848195	1.12501237174578	-0.950730450032458	0.34174122650538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1804481507842	1.04181016172925
Merged-chr9-90263082-1	3.85225837311217	0	1.32727982685047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-43469314-2	2.55444199491074	0	1.3996538785275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167959650-1	3.23433148389635	0	1.34920223571146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51178517-8	30.0874890951837	0.425362144766247	0.360588673744671	1.17963257234042	0.238146382212376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10828698307257	4.47112420484091
Merged-chr14-65343384-5	18.5995324079039	1.26638615669724	0.487479192705722	2.5978260726745	0.00938159999225837	0.105534521104169	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61208347682468	4.90460162536971
Merged-chr10-13295240-4	7.76206514794282	0	1.30482254165208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13716506-3	4.63305607377986	0	1.3033511026034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37964728-5	14.937364689164	-0.875941246129508	0.440170505345635	-1.99000440850005	0.0465904498718661	0.352128098233514	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2420353253079	2.79663408657972
Merged-chr12-32767050-3	4.93392494379422	0	1.30950816151044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133160435-5	15.2797939934711	0.569260658629288	0.47690050087298	1.19366756291352	0.232608033756067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96198032907882	4.64075967417402
Merged-chr8-125113479-6	19.3478021315093	0.0533414148002496	0.386263065719525	0.138096078901269	0.890164484670015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29498230120848	4.29471593985209
Merged-chr15-9572088-4	6.17678220126333	0	1.33125403566088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95048856-2	5.55400493879956	0	1.29987878502079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96314303-3	8.9982996865098	0	1.33512852138044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21168113-2	5.00645208731857	-0.261562787738355	1.02900658870538	-0.254189614147595	0.799349073871241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13008714299102	0.890396206374751
Merged-chr4-12460374-2	4.36580526554502	0	1.35697306091925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12810587-3	4.78993652755007	0	1.33604839030573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130430112-3	5.10294165052017	0	1.32261842705628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-40135157-6	16.0025850808525	0.853834742639984	0.426570471659743	2.00162645885403	0.0453249211450685	0.34523864053452	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84918977611495	4.44153239212719
Merged-chr8-35705703-2	6.16359649676224	-1.37980103309192	0.77102331787073	-1.78957108184795	0.0735228908475773	0.493967484596269	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5008629714877	2.03280651306513
Merged-chr11-32537366-3	12.0423929052196	1.14155271046589	0.541240818108832	2.10914009489275	0.0349324908863156	0.286699139595225	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97775601210587	3.59296178371372
Merged-chr3-16086735-3	4.4207892827463	0	1.32155572544585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67984791-7	16.2071801231577	0.147324439790746	0.34556879377711	0.426324490068883	0.669871415001296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34663972074276	4.50073464420834
Merged-chr11-29796748-4	10.6190476184672	0.729063242471924	0.510721474968708	1.42751632387613	0.153431123367689	0.843251727598576	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89634405676149	4.7901306428307
Merged-chr5-72861931-2	4.62580300275809	0	1.30983950031757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21202043-2	3.85213626434533	0	1.36238415324995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191480091-2	6.51347230301849	-1.06784893063445	0.711687900250055	-1.50044553273879	0.133499032438457	0.764200459339104	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74262785163456	1.97898450809916
Merged-chr8-105714367-2	3.58282143970838	0	1.34728918185619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99962048-1	4.3874054071818	0	1.31516313369323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88299430-2	8.71543622989827	-0.651871290749665	0.540424213313152	-1.20622147322614	0.227732106424136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83360866229343	2.84534533489912
Merged-chr7-90216095-3	10.0678713674058	0.903544916404518	0.61449520068264	1.4703856358858	0.141457339456	0.795685576768687	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67195113098334	2.93621765520635
Merged-chr11-79161334-2	5.48281427701176	0	1.32804382852767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162649373-4	13.9529665856206	1.55775941537825	0.463091440316474	3.36382683798621	0.000768697572432401	0.0154557881748208	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73470913230903	5.17940186307171
Merged-chr2-156515892-4	15.2057001141115	0.522567855070802	0.463729884833803	1.12687983276749	0.259793291139824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98026351394202	3.6697027163858
Merged-chr19-28612446-1	2.69428058805633	0	1.38760338225629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-30266071-2	6.92453272310544	-0.777444002546351	0.588647651035723	-1.32072896439566	0.18659175274669	0.969392961916458	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67115792381436	2.52597312980084
Merged-chrX-121232574-1	1.52240035606449	0	1.72085462600888	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60490407-1	4.15702386333905	0.179844453667489	0.979483428647484	0.183611532780934	0.854318215095155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39772329436364	2.27386322119676
Merged-chr8-117074748-3	3.89966941480551	0	1.35822568578949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-26635712-4	5.4433509349314	0	1.3248977259628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4618386-5	13.2821103078721	0.20240816571857	0.43968805424539	0.460344928101244	0.645268657452876	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45149996482256	3.73354420044957
Merged-chr17-88545485-6	16.8958930128089	-0.213699829677651	0.561888033855646	-0.380324578566399	0.703704492825721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06627026549994	1.9791255453587
Merged-chr9-104490873-6	15.1676983072235	0.476737370172805	0.489932946093602	0.973066567525189	0.330520218799197	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00491097180508	3.41790967700689
Merged-chr9-106215950-2	8.98552631291242	-1.62577064673015	0.587072957317144	-2.7692821249334	0.00561799647453845	0.0711874340944715	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13540948427519	2.73430231295182
Merged-chr3-121417579-1	5.33967907974745	-0.83642685305183	0.832926584607529	-1.00420237330515	0.31528107841247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68596869804033	2.7105221612361
Merged-chr19-55839325-2	4.1748344599118	0	1.30636894950858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43672285-2	3.12389389966555	0	1.33656585913556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164389758-6	14.8815121299816	0.581241301475373	0.409183371313184	1.42049101264797	0.155464783223644	0.850766411902874	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35747394206272	3.96833810538277
Merged-chr1-9573349-1	3.23168063496272	3.22459523953494	1.17212114891593	2.75107674877918	0.00593997247380343	0.0742451111846134	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.898163539755574
Merged-chr4-59497922-2	3.17954365686806	0	1.40236198510004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20788977-1	1.58509028123603	0	1.4911233985911	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140973598-2	1.64465133334288	0	1.65740713454281	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13526414-2	4.45336125900296	0	1.40452032974399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68189940-3	6.17259156922194	0	1.30419196295524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40350893-1	3.20497308072169	0	1.34531882535038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123932576-1	2.63643116066218	0	1.34896166236698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80823376-2	3.27393612127844	0	1.4177487732432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8905690-2	3.49816475213107	0	1.34107206701558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163401457-3	3.61265242247699	0	1.34315783102481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147760131-2	2.26528038306471	0	1.44668266296545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124068604-2	4.12903549185785	0	1.31707234783277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152742213-2	7.48962016129984	2.33652429811799	0.685385865597498	3.40906402568003	0.000651861787757401	0.0135442163379317	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4771773861677	3.63051091633326
Merged-chr3-27614302-2	3.83113639906771	0	1.31588932391034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75191334-5	10.2848976353707	0	1.29435394941752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88496579-3	4.14186258790402	0	1.34921532474341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31190775-3	5.18149437496171	0	1.31934392873448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130782686-4	5.61105179198478	0	1.32018756579878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128377974-4	10.627867839914	-0.716155214982868	0.623242594721949	-1.14907938104322	0.250523249677229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10102645936194	2.16298459065932
Merged-chr10-80696110-4	7.01146789560183	0	1.31121542428954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41336966-6	22.7615681350318	-0.802248790579342	0.396547751432196	-2.02308243504569	0.0430646491730769	0.33312417925963	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80992781080858	4.0833050856895
Merged-chr2-31256762-4	4.47361628276936	0	1.3294637275163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132158435-2	3.4598941539408	0	1.35348852020423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91087103-4	4.99721869454793	0	1.31368709284219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17727000-2	4.19045990539647	0	1.3259950339397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80857386-3	5.53599676904791	0	1.29919996857609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93279285-3	9.73228371819876	1.38214329013596	0.486971171447793	2.83824458443149	0.00453624081062422	0.0603348650541523	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33641151190265	4.76636813428128
Merged-chr6-48016347-5	13.8951070183277	-0.754816432393839	0.414540980630715	-1.82084876444641	0.0686298492825311	0.468570278049972	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34604404793788	3.4351330970797
Merged-chr18-69667426-3	6.04190546061773	0	1.30854708177674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50996486-5	12.5155151004263	-0.0928961107040256	0.479762322078784	-0.1936294419735	0.846466043099509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69861076225826	3.67155452884011
Merged-chrX-78483245-1	2.02797868780089	0	1.44937404178434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74897821-2	2.48105091100277	0	1.42627536350865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115076964-2	2.85007938416613	1.1219821062956	0.954255295856488	1.17576723039149	0.239687904629661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06278252053765	2.00098049458557
Merged-chr5-140749289-2	4.37939992001594	0	1.31933053874628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36936558-4	7.6647057194526	1.80885648461955	0.857216583586658	2.1101510624668	0.034845346208066	0.286091719225063	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917336671752516	2.17813337661218
Merged-chr5-72554561-2	3.0408236723958	0	1.3581964424634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102681159-4	10.1345634587025	-1.99697677547572	0.739884101724231	-2.69903998588691	0.00695398204579125	0.0837631171915714	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9166615115122	1.92713101668536
Merged-chr4-133178519-3	11.0940740046745	0.901625924446957	0.501288166068911	1.7986180115072	0.0720791262173327	0.486629050707493	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96558208419039	3.79673827662116
Merged-chr16-78317039-4	5.14870062583153	0	1.30035053300212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45092984-1	2.29229746765348	0	1.46671449345208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11875416-3	4.30830246484413	0	1.38768683385502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24950487-2	4.37901248217999	0	1.30223823367828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136678826-2	4.9681155556552	0	1.40485392765393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114347202-2	9.26282671565524	1.61826994292316	0.693600515909527	2.33314408770458	0.0196405842045842	0.184752320175196	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28762579399606	3.53371746902528
Merged-chr7-110250884-2	3.57688246315082	0	1.32807509699308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47276869-4	6.4939998005694	0	1.3255152792716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53741196-4	5.89522644260955	0	1.30118902515476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113877605-4	6.02216793274731	0	1.29918806152127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8676849-2	3.47500421106727	0	1.33801617294771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88677535-3	5.7250787828184	0	1.30997307128914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129082936-4	5.42223184725058	0	1.30582589235395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96874246-1	2.12712306011607	0	1.53145677945085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116414726-2	2.07756684415345	0	1.50164087091208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69891048-1	3.85639743307112	-1.30702525929149	1.04103321312296	-1.25550774251532	0.20929449919772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13009376111463	1.03956264035389
Merged-chr3-107953523-1	2.28576661341521	0	1.38850628161088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143373924-1	2.7518533938982	0	1.3749657618839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148419812-1	2.08674309467516	0	1.40311634334171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105018146-1	2.52822232198462	0	1.45573094920325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38004452-2	3.95745226869253	0.30293054862176	0.771400818872775	0.392701875873587	0.694539685002254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38540488173415	2.62680317507726
Merged-chr3-127446384-2	8.11021714803099	0.986235593151424	0.785391389780472	1.25572498754677	0.209215696414674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53906917136908	3.1328222325954
Merged-chr13-81132519-1	4.29600434975677	0	1.30835360164137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23604075-1	1.14008149589893	0	1.555416077812	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39257098-1	4.29501275213109	0	1.30862209275577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60817791-5	9.13478555967471	2.49395811666931	0.872691689276158	2.85777686130813	0.00426620279569209	0.0575871282559998	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0816146567097	2.26336120057495
Merged-chr5-24598753-4	5.64946257665717	0	1.30595465630935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79051008-2	6.52737462644498	0.145113160972334	0.927536664598732	0.156450053686139	0.875678285740286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17523286157232	1.59982791176663
Merged-chr17-10572658-2	3.02010556309108	0	1.35694437491841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43908743-1	2.71493644305227	-4.74307634915251	1.40980649338808	-3.36434565410025	0.000767253856728928	0.0154315083169617	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22947659038141	0
Merged-chr13-60613764-1	1.89496859252409	0	1.44348944628779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119416494-1	2.98590166020084	0.408801731640778	1.12428068858033	0.363611806013485	0.716147909502121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29795804760677	3.14637975729418
Merged-chr16-35755890-4	9.75608741703218	0.394961113112606	0.559374163756945	0.706076788495046	0.480140385575046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22616617395308	2.71204808382565
Merged-chr19-24471667-2	4.90016572083721	-3.02477021368892	0.929831387895252	-3.25303087534583	0.00114181089916428	0.0210532660882587	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5783474835306	0.683637474991079
Merged-chr16-15990875-1	1.9490611673169	0	1.37578880475588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45026830-2	6.37110199349967	2.01403242531597	0.740678084364296	2.71917377850401	0.00654452149119391	0.0801008243797635	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74864852996336	3.87840500255722
Merged-chr2-122407513-1	2.06219481010874	0	1.40331626985832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113911366-1	1.90369208433577	1.76360608007493	1.3595895770766	1.29716063568761	0.194575921844301	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	1.27911570690487
Merged-chr17-5625731-2	5.86142247425921	0	1.29511438223951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63927094-1	5.41221968061425	-1.7013862139563	0.79079285216675	-2.1514941735937	0.0314372152072952	0.265600962087576	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32950551217455	1.31495854024319
Merged-chr13-15846060-2	2.59102920391251	0	1.42784699311333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72145566-1	1.89224799093757	0	1.50968515534557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124708426-2	4.74647351761118	0	1.32436926115465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85193014-1	2.89407892329385	-3.51831484263749	1.22294568693888	-2.87691831306433	0.00401579536579016	0.0551569141749693	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24915626520992	0
Merged-chr10-19191701-2	2.804368746337	0	1.40586097893547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64610162-2	10.3692059821254	-2.355857441648	0.650355633162464	-3.6224141400794	0.000291866351720988	0.00731019494808726	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.22496322941006	2.44404506879557
Merged-chr2-152693428-1	5.02762734456025	-0.302570263129898	0.96701271672075	-0.31289171062398	0.754362935574249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43764493530544	1.03956264035389
Merged-chr8-83146182-2	7.18865007974461	0.512591426854839	0.74096796747789	0.691786216615544	0.489071593779761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32761607610982	3.63065734819575
Merged-chr13-90452511-1	3.07708824547923	3.31188066141692	1.08034288666574	3.06558288326254	0.00217246155415252	0.0345237530928139	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	2.94638558187799
Merged-chr2-59541706-1	2.01923923448474	0	1.48700507720554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100679154-2	5.30317671991791	1.60815230420059	0.86973903411813	1.84900555352351	0.0644570108125229	0.446773298079917	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708251031414953	2.33904733505278
Merged-chr8-24430687-2	2.84734844188867	0	1.8754422019515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33232225-1	2.63584596695123	0	1.36398204955535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116733796-4	4.89701954906571	0	1.35408121442261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96949350-1	1.58848775428991	-0.209414235118432	1.44413987212358	-0.145009662263872	0.884703243044593	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.306240821987646
Merged-chr5-66014170-5	10.29471602449	-0.947362388446671	0.540606660702887	-1.75240606028592	0.0797040101136335	0.523819596186815	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64056188637835	2.30302996175038
Merged-chr6-137747718-3	4.52168794263671	0	1.32258034075251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106903990-5	12.4194921554807	1.60382985521243	0.540712804455871	2.96613995821015	0.00301563221256216	0.044521557030198	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11955323296968	3.43724108861284
Merged-chr2-133499102-5	8.08402798697956	0	1.2973070902632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37462387-9	35.0401187369702	0.445303883000214	0.316681379922084	1.4061574542519	0.159677374741131	0.866850355556528	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34910714802074	4.79930226535171
Merged-chr7-100533551-2	3.10290255088543	0	1.35390613583031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82346651-2	5.92783763522027	-4.68258520126075	1.0740014214361	-4.35994320659225	1.30096204574185e-05	0.000622803412754922	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07320037097279	0.306240821987646
Merged-chr11-94506147-2	7.01724480735815	0.432874611109572	0.659539696369136	0.656328365817268	0.511612870217583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22187524424608	3.0228027030022
Merged-chr1-171260579-4	9.26655189011514	2.44041397026458	0.966566742979568	2.52482716583201	0.0115755202764807	0.123961543149392	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.961371261847668
Merged-chr11-70849391-3	15.4921831460727	1.39984622607213	0.475817911930007	2.94197883470609	0.00326122215944914	0.0472627685143853	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16294717442766	4.47437886928521
Merged-chr11-46035314-4	10.7640774840179	-1.10746466402103	0.844655042725658	-1.31114432283183	0.189809008685445	0.981196692482492	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0040136927378	1.03295826569721
Merged-chr2-83767142-3	5.05492475976364	0	1.32654468329403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67449578-4	7.42515768174168	0	1.3235662439785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60674424-5	20.6997180675083	0.782873168673536	0.823342095363879	0.95084798054391	0.341681551900372	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23106601641985	1.47711801254374
Merged-chr4-129792826-5	20.2530489524012	0.715659781068853	0.471615709928083	1.51746382913746	0.129149619122378	0.746718369418767	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37275386447843	5.26676476006597
Merged-chr11-83605720-2	4.17349594026454	0	1.31925172448811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121466679-4	11.1908084862254	0.763332515268451	0.496204940623163	1.53834122310393	0.123965205403598	0.725927978519894	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28164436698504	3.98010924297712
Merged-chr5-64322533-1	4.16310633563425	1.90512240331841	1.03623688980699	1.83850085058568	0.0659886366348412	0.454814202039904	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581562804033966	2.30811930973386
Merged-chr5-31908173-1	3.82146193784164	0	1.33035586000564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10856902-3	3.9400125375953	0	1.31327475439298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-24517034-3	5.15938202764649	0	1.31141781962072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69202490-3	10.7989192633522	1.25029052962459	0.581063731958298	2.15172701522923	0.0314188611046439	0.265532449268503	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40506362244752	3.11266628444867
Merged-chr2-122022481-3	10.3796723787167	-1.52480472941874	0.574860344696039	-2.65247854281024	0.00799032063463132	0.0929232055865133	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08150612372067	2.16609404538456
Merged-chr2-30435974-4	5.09801065691003	0	1.31310693523703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80582331-6	17.5457702554156	0.471040038824241	0.424184636531388	1.11045992300899	0.266800888740738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47416648959391	3.88751210489832
Merged-chr3-10466100-2	4.65804475447215	0	1.32362679384201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124787211-3	3.99398083415042	0	1.32984563945077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57237224-3	4.59581912550439	0	1.33510267121764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-21973666-3	4.23812400448111	0	1.37443559729119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84251021-4	5.50942859676037	0	1.30634308236746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20407714-1	2.24462148299981	0	1.49075871393567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104985895-2	2.95000976203224	0	1.40209488659373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55037701-1	5.03817671583267	-2.24282984283922	1.10057924767925	-2.03786310487737	0.0415636252761096	0.324571780269199	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30612755834496	0.581381506691384
Merged-chr9-64806067-2	2.9261774508517	0	1.45299996642754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143512471-2	3.39043769103656	0	1.43220578682323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152288119-2	4.09680589459481	0	1.32117086006391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25289665-1	2.35774217082654	0	1.4196176939454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30508134-2	3.71710114181046	0	1.31708033683921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81534169-4	13.9628523487678	0.970175685214827	0.532664211054615	1.82136450146329	0.0685514675444885	0.468181876898217	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9544707549865	4.08280498184314
Merged-chr5-54005663-1	3.43498101896739	0	1.32838146517491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4922074-1	2.51126228084624	0	1.33970821279456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52682795-2	1.7553960865467	0	1.7242110164196	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154274914-1	2.07615813648592	0	1.56315069797863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17586009-3	5.58349432410561	-2.49217982795783	0.847705720894383	-2.93991153596135	0.00328305966211897	0.047463455017882	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17310675070553	1.27465395918041
Merged-chr6-134620969-2	4.17420922876706	-1.94957796396827	1.20703652212421	-1.61517727776562	0.106272309716951	0.650048708299529	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86075692801465	0.469435083901436
Merged-chr18-66494751-2	4.34849851159149	-0.500143352125669	0.88154765791618	-0.567346924053905	0.570478502389977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71186632755022	1.64536602019594
Merged-chr1-80715743-1	2.83096837161352	0	1.34856628435751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69249355-1	1.93588690404445	0	1.36996997565226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80032948-2	3.77437579946219	0	1.31867286812871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120926413-2	4.0667228357191	0	1.32557772541447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127294082-2	2.33827099994795	0	1.64451076525988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116202786-4	14.4625952645298	0.603763690251396	0.44126021252734	1.36827131273248	0.17122716684281	0.911751177029846	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28003063242509	4.85176192945568
Merged-chr3-132029286-2	6.43310815247798	1.33404701578824	0.844216930549584	1.58021826797501	0.114056889632229	0.684027304506945	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02675605494067	1.88639437725876
Merged-chr10-127561407-6	16.6719672957298	1.55955841020701	0.348723555137267	4.47219118763893	7.74221593635299e-06	0.000412325055074916	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30444036511557	4.82568816967688
Merged-chr3-109478532-6	15.7324059676614	-0.379067740262586	0.572609594444608	-0.662000329614205	0.507971010447163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96606334240949	2.09849478765844
Merged-chr15-94683874-3	4.49355105002425	0	1.33368424968313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117918941-4	5.99137190050102	-0.420205475664632	0.992551632864099	-0.423358807493058	0.6720334942002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00604125618525	0.733321818366247
Merged-chr12-34725330-2	6.30669069311639	2.28021084652932	0.983363540542649	2.3187872567159	0.020406574501756	0.190226536004529	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	1.79065328655757
Merged-chr4-59178186-2	6.68795002137442	-0.368946133825779	0.675128762469766	-0.546482618332087	0.584734232548757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8539600082132	2.53576222657069
Merged-chr2-119250994-6	13.3018597305823	-0.104859480456874	0.548703985409738	-0.191103916219182	0.848444179485726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43196829583117	3.97844572449181
Merged-chr17-26640448-2	4.65609668820345	0	1.35659223116619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87415014-2	3.70713881413728	0	1.31065298952492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30848779-1	2.92504227502793	0	1.35604541871936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72758823-3	4.44472097518102	0	1.31705973174482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34522189-4	10.378137426627	0	1.29235918880523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45385077-3	9.65306863185775	-0.566172787878589	0.46089823724446	-1.22841170160148	0.219292457383941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75070915065765	4.11308565624957
Merged-chr4-59241237-1	3.05870002986964	0	1.37291008854952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37659981-1	2.44021684986994	0	1.41510874512246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129812201-3	5.46968096497536	0	1.40678562347095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73610308-6	16.342310761517	-0.771341179571147	0.401448361384278	-1.92139576036978	0.0546818326363052	0.395532326262121	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59038616561449	3.79566968813091
Merged-chr14-75066107-3	7.38183829283754	0	1.30504603001211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43230024-5	10.1998955891294	4.7787973767341	0.900376161766915	5.3075565298798	1.11104553957783e-07	1.35865111993852e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	4.05388155038342
Merged-chr8-124085819-4	8.62006293456672	-3.31955105267816	0.846473997738005	-3.9216220008516	8.79548958596188e-05	0.0028594530471854	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35702215080641	1.03956264035389
Merged-chr17-40716468-4	11.3789648735926	1.28757394321112	0.676735508402311	1.90262506876714	0.0570894856472317	0.409322967863068	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11137315988185	2.48211543439749
Merged-chr15-58585639-3	5.31791933254555	0	1.31157537435747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59486342-5	13.6929044381626	-1.23195443030478	0.57090811106715	-2.15788566745354	0.030936722102612	0.262680748767839	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49777005250269	2.08628700317133
Merged-chr2-21141872-2	5.76849003899196	0	1.30608530536124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67569321-2	2.91830721512548	0	1.39651147444392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102615802-2	3.08213244453623	0	1.32603571974999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46577689-4	5.40617322154662	0	1.36092427149503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122801976-2	3.35318215749128	0	1.40710972234559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12251945-2	3.52841063958504	0	1.38569432550229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81191504-3	5.17302294211951	0	1.32256291416452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96977875-4	6.74104975318921	0	1.32493695253995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45772775-2	7.15500802080597	-1.49414961081038	0.581863499773635	-2.56786963160888	0.0102325631243912	0.11285351391164	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22680506449001	2.69681453037171
Merged-chr8-53505646-2	4.8822871292524	0	1.30917790726373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50482945-4	5.72155468998928	0	1.30649423307366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131931038-3	4.97833149120765	0	1.31040718382445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78156897-3	4.40011363595971	0	1.34410349803834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80679766-3	4.34706859184272	0	1.30653536274046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92441101-1	2.56154730476102	0	1.41579660240981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111037525-4	6.45194690791851	0	1.34177625040475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37214765-2	7.16909849319774	-2.38648840801807	0.773898303129136	-3.08372353107467	0.00204427472302833	0.0329108588447917	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19908352137526	0.926147595614233
Merged-chr16-76977168-2	6.53485724582015	0	1.31430527738874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35163398-2	3.69433571082904	0	1.34859211447137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48821658-6	17.7370899239944	1.43789657148735	0.397913549615416	3.61359037126804	0.000301986031972836	0.00751183069862846	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60591963395436	4.84375949772059
Merged-chr18-9556053-3	5.05693378817425	0	1.30851377264412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96503461-3	3.27188140173338	0	1.35057169813168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71441660-1	4.60593926223388	0.0786496663826544	0.774998138184672	0.101483684292301	0.91916650873669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76057742851603	2.44771839090964
Merged-chr9-106314856-1	4.720889635753	-1.59109835400643	0.706749503920504	-2.25129037258638	0.0243671521735732	0.218391979966303	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73941691330579	2.03169262342392
Merged-chr11-11746378-3	3.80337875933256	0	1.37605959341082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74328317-1	3.69618285513523	0	1.32558366533685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57607649-1	2.2373210052687	0	1.40664465315914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171164473-1	3.6992315219798	0.128452350245356	0.764248882720046	0.168076595399368	0.866523021567931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62085136693986	1.73745702279306
Merged-chr7-71874821-2	5.41588908903428	0.414933531548879	0.709435567427012	0.584878388679841	0.558629490962706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16232947900947	4.00987897767858
Merged-chr14-121956573-1	2.35610880894992	1.40860395247931	1.26128248913784	1.11680290863482	0.264078604938114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.683637474991079
Merged-chr8-95419290-1	4.76301552278385	-3.83490358579595	1.12854166793364	-3.3981054441859	0.00067854261457669	0.0139458025105899	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45607067430111	0
Merged-chr18-49705639-2	4.52555262632051	0	1.31577589779611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110248815-1	2.37899671656241	0	1.35216936484314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27171346-2	7.00551868988539	-1.39993997291561	0.616996337724951	-2.268959939175	0.0232707621497452	0.211025704057348	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83702250214519	2.16430127775811
Merged-chr19-44496660-1	4.09796402706892	-0.140655516651731	0.699526895325034	-0.201072349886384	0.840642002033843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6178398894631	2.2728276532209
Merged-chr4-129877711-1	6.5436305904971	0.977819215300761	0.751034083517522	1.30196383461197	0.192928748907881	0.992628855800202	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09401441758695	2.51392650184912
Merged-chr1-39768080-2	2.7337079264126	0	1.40488288947568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125404217-1	5.21886070282092	1.27534602078504	0.770784348223454	1.65460809333315	0.0980040207384224	0.611318321799633	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83424740308808	2.65139029413517
Merged-chr18-26905801-1	1.68306784817347	0	1.4420803506278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79525756-2	2.25495577526906	0	1.40242631783601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136573690-2	3.52462330066492	0	1.34216444208805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41760223-2	2.99203705978838	0	1.36281433444226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129549271-1	5.12590119661127	2.15222878956513	0.680889615927855	3.16090705338818	0.00157278677168895	0.0269256810015158	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8946509802961	3.41036269784269
Merged-chr4-4596104-2	3.25102545638333	0	1.39097073411312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53991137-2	5.72353761309119	0.645710767123259	0.727430219646611	0.887660080216283	0.374723625279478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11956738187876	3.4001121120857
Merged-chr12-3696322-3	5.15829289088391	0	1.32028253804823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85001535-3	4.88562455291761	0	1.30910446058798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80067410-1	3.64175719542097	-1.80692362028664	1.23549294205213	-1.46251229673993	0.143600877153617	0.803196346698644	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00094035035971	0
Merged-chr5-103721181-2	3.91986275480042	0	1.36433558967311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102225542-2	3.3338096649031	0	1.3929470865914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-56429525-3	4.00789701699682	0	1.32094769919561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25227745-1	2.66891703192929	0	1.37967030701134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140636848-2	3.79157495562892	0	1.39088839448006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77198615-1	1.37764010044377	0	1.48425848486068	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-33807048-2	3.9156180982425	0	1.34263203604314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40609928-5	16.3383749496284	0.158480426428486	0.62461590294425	0.253724610086706	0.79970831997168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4320247290649	3.0500197815571
Merged-chr9-94703622-2	4.81557905533386	3.80663444551267	1.09337375974994	3.48154911490035	0.000498522347286317	0.0109580679624942	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.93871841517079
Merged-chr3-136086640-2	4.92533747033654	0	1.33112914538821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34573964-2	3.20604704142283	0	1.41883233835036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18627590-2	5.83358066601166	-1.64263853539521	0.814044986818737	-2.01787193827529	0.0436046002746616	0.336488687948516	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93073897084573	1.20275690226768
Merged-chr5-25526276-1	1.83403205683896	0	1.39388097186835	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85689485-1	2.35792433407148	0	1.40645218606212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24388966-1	5.00025499634416	0.644301011609424	0.95441338008723	0.675075418107128	0.499627850447671	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78249664185419	1.80442813729532
Merged-chr11-119449682-2	14.4202903238812	-2.24519340968346	0.684790676177718	-3.27865651181966	0.00104302507337263	0.0196702789161927	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90585687710447	1.85953480160324
Merged-chr5-43879973-6	18.8768517733492	1.17272528681212	0.438535604731451	2.6741848875196	0.00749111393766406	0.0883759399477515	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30707633385756	4.34454028800689
Merged-chr13-12635189-2	3.72390749262421	0	1.33080001625592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74026470-4	5.0867779292298	0	1.30485702886878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99252971-3	4.31850919485691	0	1.30714979387575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99974763-3	4.25612065780173	0	1.3417230120206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35011739-5	7.31878399734245	-4.15920183130578	1.01809632743821	-4.08527338643034	4.40249497570088e-05	0.00164957245803985	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99336579765586	0
Merged-chr7-81904345-3	4.81446251361399	0	1.30759838350475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8927710-5	12.9071389484597	0.616902415236296	0.447771686514397	1.37771644303477	0.168290852588735	0.899288750498069	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09641984051275	3.63005552808825
Merged-chr3-27289048-4	7.42659289361595	0	1.30302042494852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86428380-2	4.7563031854039	0	1.30273517599511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62182669-1	2.96337993363042	0	1.31757365266747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86825151-5	11.1568971689793	0	1.28920337923593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114970938-4	6.82997195689366	0	1.29592873583734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80670598-4	5.49909221205064	0	1.33353340708423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13740965-2	3.1785062578293	0	1.326666180001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37365657-1	3.73491889696038	0	1.32363378643898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115539765-4	5.77667836084975	0	1.29735869384849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84235723-2	2.64611010778554	0	1.37631063753954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95497121-2	6.13670349060853	1.82126644623165	0.799409880903937	2.27826361637192	0.0227108760191839	0.206953689073992	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59708602080932	2.57078032519388
Merged-chr11-64837964-4	5.80860555082757	2.850341078056	1.15812735615428	2.46116375967574	0.0138487139059217	0.141261895936618	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr2-35442265-5	9.68186568652571	0	1.28752769092079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31139973-1	6.42216558990394	0.0792078352728446	1.13915440221112	0.0695321328865522	0.944566056194585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.875096081317002	1.07982873328226
Merged-chr12-44360480-1	4.14074756432888	-3.09310655848713	0.836586244935696	-3.69729549967067	0.00021790863516181	0.00584542597425438	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29753698969352	1.20275690226768
Merged-chr12-52003014-1	2.87847438554393	0	1.32970679262833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32910253-3	4.14481729357091	0	1.32128167893866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27969521-3	6.65464065940875	0.0839162302605545	0.626471629292564	0.133950567490687	0.893441663480141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76786427987608	3.05043424441622
Merged-chr2-29649911-3	3.96095773559622	0	1.34761126001204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45452859-2	3.81731444014255	0	1.33127774254369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182961903-2	3.93703104123048	1.29686161916207	1.32734182912431	0.977036653789218	0.328551006495974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr10-117910111-6	15.5707019505406	0.0506440264036401	0.381667909567925	0.132691340125956	0.894437491879922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26853852444748	4.09454463499594
Merged-chr8-125559228-5	10.7419813330765	-0.425612488522316	0.620545466824237	-0.685868338867208	0.492796137180729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43217389297119	1.85731693530124
Merged-chr12-8359581-6	14.6841653556323	-0.418830842597647	0.582641709735393	-0.718848025466388	0.47223456325073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02729625532995	3.02319887197476
Merged-chr3-137846773-7	15.1614967542491	-0.00565751604347718	0.495453276653644	-0.0114188689631619	0.990889258745348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55145148397146	3.12487291087101
Merged-chr13-52277406-4	7.46100642699685	0	1.30423351030286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53758228-4	5.9841384082089	0	1.31441392440341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34073927-6	12.892045595574	0.186469580541503	0.49040576063437	0.38023529801178	0.703770759421915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.550691452548	3.77079788717642
Merged-chr13-103869068-2	3.61175121827212	0	1.33386691461966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135276965-2	3.51921221725933	0.84339985732594	0.844882738778394	0.998244867146181	0.318160634787783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13837223854305	2.53247394686427
Merged-chr17-23610698-2	2.8944868749044	0	1.40935725122056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131965664-2	3.26754469506684	0	1.34600759004666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69664731-1	2.21937019922739	0	1.4011270031329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36521963-5	10.9966634683494	0.310999367706576	0.583285804637261	0.533185215950837	0.593905374450217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8747649010633	2.60280255630439
Merged-chr1-181395368-2	3.39375782324326	0	1.39461263749743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72361453-2	3.54108790800047	0.108431555798912	1.39105310352954	0.0779492569505696	0.937868417194916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr6-43477950-2	3.01569755869181	0	1.36843302341606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95827046-2	3.2508168899226	0	1.34507906408975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79221814-4	9.95490619409211	0.460766332195178	0.51551018351138	0.89380645995523	0.371425452238911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45305348512762	3.7271518555089
Merged-chr9-21864653-1	1.90631324244582	0	1.40361396886126	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38291577-2	2.20091964466151	0	1.35685626116686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86548489-1	2.58408344154241	0	1.38240545972062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9753865-1	2.68601937080425	0	1.35514607317957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131298842-2	7.14623038648999	-2.31649822518847	0.739564764921146	-3.1322452543226	0.0017347489779	0.0290589353268017	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82093514773781	1.31734301959449
Merged-chr13-9152451-4	5.09324363957294	0	1.31667268024065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65533561-4	9.85071361002864	0.303216742917153	0.48234481063028	0.628630672984622	0.529590874545911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90298136040202	3.27911815519311
Merged-chr5-45474396-3	4.41992729999133	0	1.30941493020371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69628478-3	4.53511866692731	0	1.30800128866218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51870344-2	9.41970863752937	1.39846242392229	0.504763208458666	2.77053160865786	0.00559648680068546	0.0709974813584919	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31831419810555	4.67839749222331
Merged-chr4-59450393-3	4.97466100738758	0	1.32896653354553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90869900-3	5.99904982273639	2.4778915172657	1.18940249107235	2.08330782545416	0.037223173900803	0.29970250390856	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr9-66361925-4	4.45927504974975	0	1.30402090154783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108688509-4	5.65397064367095	0	1.32924468270374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85449693-2	5.21920167520817	2.88474304928053	1.21778947516946	2.36883558948406	0.0178441837457424	0.171452143956665	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.11548603074465
Merged-chr5-66299144-3	5.13941151578868	0	1.31637303802814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8836844-1	2.22035800540395	0	1.34552307294294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118615695-1	2.23716828853684	-0.443040272224696	1.35514558554963	-0.326931863962796	0.743719420231686	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr6-125030722-5	15.1892767723932	1.30228577341169	0.427569826941306	3.04578501885367	0.00232073704202297	0.0363758413883504	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1433473078833	4.28134613944985
Merged-chr12-13491952-1	3.93873863571434	0	1.31642672142913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151917926-2	5.21986564014217	0	1.33131885309702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59559800-3	4.75530863544069	0	1.32512090764896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21992357-2	4.43235747516111	0	1.33244106573655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129791164-4	7.57607190361117	-0.342670119635096	0.546617004168078	-0.626892535398933	0.530729680656442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82102507304539	2.68181707901987
Merged-chr17-48558007-2	4.16204475935254	0	1.3489408499925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89864903-4	5.27825907023015	0	1.32941127368359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125328463-4	6.00484924409982	0	1.30380638525052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52093065-4	4.35371094896723	0	1.32092146408907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80295791-3	7.70299332330734	0	1.30102825912398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141835313-2	8.05128928669944	-0.719267961796461	0.813639603804335	-0.884012968927987	0.376689211988258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0968701910181	1.59982791176663
Merged-chr13-46634283-4	6.85460350281472	0	1.31788057216969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42296353-4	4.70801033163258	0	1.31944509661827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36758662-2	8.54996842348037	0.507906922718107	0.489012488723777	1.03863793753742	0.298973154937574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42832295425736	3.86266584564175
Merged-chr1-167343881-1	2.65745949595819	0	1.36389252838125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11166710-3	3.95846957052002	0	1.31511844852876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14086013-4	10.247480561913	0.515941226130571	0.595897393829503	0.865822256437307	0.386587642005747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63696937586552	3.24987105754228
Merged-chr13-51350988-2	4.1639179980524	0	1.32244508397639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8979109-6	17.8090815268849	1.52984502466768	0.407585850272508	3.75343016359581	0.000174431144292954	0.00491309377369283	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62721213778732	5.04463694200494
Merged-chr9-48547409-7	20.8298159816618	0.828421898659194	0.414634233024292	1.99795827907596	0.0457211834642325	0.347304381612284	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41268207742664	4.00355813657548
Merged-chr6-92989334-2	5.35600090699301	-2.61947991862603	0.997477274695199	-2.62610485980894	0.00863682059172818	0.0989422858948147	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20238942448404	0.73596151290311
Merged-chr2-141030882-3	5.28446179723628	0	1.33939140206189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10132774-2	6.63687602435797	0	1.3213883030781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25009447-3	4.27632360288763	0	1.32975428435846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61143500-4	6.76873105502731	0	1.300484905633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-79816227-1	2.46971180135072	0	1.39038847221203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88272079-1	3.05942615869359	-2.13901239360026	1.29130441763922	-1.65647415464654	0.0976258348162174	0.609476171103316	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09476800361503	0.563523181795778
Merged-chr2-124669427-1	3.21827722465169	0	1.39392768479325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122090757-1	1.9406709863615	0	1.40207993455199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123633966-1	2.94681610620431	0	1.36084951071008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26526387-2	2.98898248795378	0	1.3583190175225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79994499-3	10.232352628123	0.697933294266118	0.560707039992494	1.24473788357546	0.213228115718613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7870044199834	4.42179352332542
Merged-chr7-81195667-2	2.23966153552863	0	1.45417778208233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85596798-2	2.88031007021279	0	1.38421635173532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34256868-1	1.39345855359304	0	1.96981142547415	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-33274513-1	1.72881871418854	0	1.40646692696105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129379635-1	3.95637585841984	1.81516921415944	0.950802236189421	1.9090922855148	0.0562501877523743	0.404645356920859	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40656106841057	3.00660696565396
Merged-chr2-19048395-2	3.55177881888409	0	1.34373956654542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26607355-1	4.92456421670807	-0.78538329627445	0.788667348889994	-0.995835947031196	0.319329861290342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44980162942981	1.41695929335733
Merged-chr15-13371527-1	2.29323652783002	0	1.4071743608592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85519027-1	1.15059208418015	0	1.56579421869222	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22201078-1	2.3459669680424	0	1.45748600393374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100464931-1	3.75272753633186	1.43256046606931	1.05535856612617	1.35741586987606	0.174649108512564	0.924323369633269	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41047960076142	2.73634229948794
Merged-chr10-7269337-2	3.28246802043184	3.19500238941331	1.19474339283677	2.67421641213447	0.00749040974074345	0.0883759399477515	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29684500016202
Merged-chr16-94501719-2	3.22174288616843	0	1.39734585815283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128703670-1	3.4146168143115	0	1.3338952002716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107842559-1	3.183141258926	0	1.3697394178653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145804123-4	8.79275326599097	0	1.32939917416021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17590404-4	9.39223457220514	-1.94496609417859	0.804734175289065	-2.41690505250376	0.015653099598137	0.154745453304064	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08002947544781	1.03956264035389
Merged-chr14-75148433-1	2.65156808191906	0	1.35526915599845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67415351-1	1.45891718083961	0	1.75902893724974	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42955033-1	2.83141471411247	-1.56186933324563	0.982642566210661	-1.58945824957352	0.111956972745972	0.675102602115927	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76200220174717	1.20539659680455
Merged-chr6-148407222-1	5.73359293928263	1.32792422368766	0.820621105772438	1.61819409024059	0.105620776070414	0.646911166285245	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44924712944273	2.59112851718609
Merged-chr2-104996483-1	4.46226486005785	1.02247240900147	1.02294573049977	0.999537295592344	0.317534481509241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.880028026095896	0.95685815637649
Merged-chr1-51944951-1	2.79211993151732	3.48539858285111	1.27475749007614	2.73416599626563	0.00625385076509608	0.0774278385934006	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr11-64816551-1	1.33033426593682	-3.85230731475457	1.46464925525449	-2.63019101736082	0.00853369038870132	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37343567837132	0
Merged-chr2-59440651-2	3.10350754958382	0	1.3417439163337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189654568-1	1.8467911328704	0	1.39017515972624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31343784-2	2.40783443675438	0	1.44458482800776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3975215-2	3.04350394788512	0	1.33773219520584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20728248-3	8.30880585585919	-2.79590310995788	0.870781556705118	-3.21079734455686	0.00132367246997924	0.0235658579818491	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49894737927065	0.73596151290311
Merged-chr16-13644681-1	2.16550274160689	0	1.43910858893983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89980519-2	3.48254034277674	0	1.39426553544043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30564288-1	2.69981296681576	-2.22103979296445	0.911796682420039	-2.43589369843888	0.0148550493170449	0.148427836799942	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18805446777892	0.963545719069792
Merged-chr11-97433320-3	4.66817265529595	2.38133028393031	1.23965550563487	1.92096132603449	0.0547365833266312	0.395884535037304	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr3-59241733-7	15.8071386815335	-1.22391467132855	0.471670200584858	-2.59485265299977	0.00946314782018166	0.106268922058359	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2693274174462	2.65217534908732
Merged-chr14-56690896-4	7.30292579585358	0	1.30596520193584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126887493-2	7.38150469427005	1.06649398661032	0.676878046002005	1.57560729426753	0.115116334059819	0.688422436668156	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43168606834074	2.52853922112505
Merged-chr18-44387306-6	11.885696470683	0.516845376096432	0.583390213738144	0.885934257938065	0.375652954362987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77974332124078	3.01803077266863
Merged-chr13-52628751-3	5.18561028288571	0	1.29721070600279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44908230-3	5.21951499470873	0	1.32043671342206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79752005-4	6.09358747833633	0	1.29092829718713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116220179-2	7.74075572650756	-0.322426183881163	0.567308428843569	-0.568343721841774	0.569801596405349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61824256772207	3.08852051181778
Merged-chr3-135851776-2	3.13252147831416	0	1.37521723678253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38655401-2	3.70580422964701	0	1.39880531296453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36894715-1	5.61570911251175	-1.64602833020788	0.748033046890833	-2.20047541622597	0.0277731822675955	0.241521753120798	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8821011256909	1.0995156753045
Merged-chr17-6972935-1	5.76596077329178	-2.20194652809109	0.750370297781739	-2.93447986227671	0.00334107232605804	0.0481211620495016	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05144318853578	1.50954942419772
Merged-chr6-72851755-1	3.9526230708673	2.5041573741842	1.26382410711954	1.98141288813644	0.0475449896078672	0.357646470693644	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr11-57524822-2	5.98669488739	-0.0418722131291164	0.911509007163401	-0.0459372456004818	0.963360267802806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38346076097943	1.09662457429765
Merged-chr3-137853466-4	7.05649050622193	0	1.3401039331201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72221524-2	5.4656592964991	0	1.30315049602282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53822092-4	5.00330936173749	0	1.30159425922877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52446085-4	9.51903782374385	1.07827065188023	0.728198125638356	1.4807380215858	0.138676397941032	0.784466762626882	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41822217780465	3.76020906232748
Merged-chr1-23247155-4	7.14137298882147	0	1.29640366101936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32912547-4	7.74396521308331	0	1.30413759035832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13470484-3	7.39126171851921	0.061944212777832	0.605136931658142	0.102363960183521	0.918467788971471	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7384512256352	1.77743761853437
Merged-chr10-94095383-1	5.10375402804583	1.33883315771858	0.842505302328549	1.58910947387305	0.112035679272567	0.675283692590977	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33107791274439	1.69735600200997
Merged-chr3-152569356-3	4.73862083562505	0	1.32156691221713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112976652-1	3.56818368592333	-1.022995011729	1.14234231880103	-0.895524042917977	0.370507019204857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07503457825948	1.6950503635711
Merged-chr9-62367853-1	2.55235721852547	0	1.33282406159265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3897084-2	2.61193432929792	0	1.37690126137182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17579942-2	4.45034663506461	0	1.34712555652252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104403858-2	5.19913108077203	0	1.32964473873072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46043245-2	4.88827533514301	0	1.3398195989422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25800368-3	4.3678485762732	0	1.32917591141942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129582273-3	9.97488817295159	-0.0597287805873291	0.542397272639208	-0.110119986954764	0.912314217257528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43170531676061	3.5782094147304
Merged-chrX-133692314-3	4.30217898990253	0	1.32724020904324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53775347-1	5.01981023394608	1.78431905067287	0.854101633646546	2.08911794613342	0.0366971072692348	0.296709870281541	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.80094935688498	2.22392366263603
Merged-chr15-66536622-4	4.49256804982648	0	1.30609411411286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101844633-2	4.28822671761355	0	1.33657519698792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124708012-4	5.9664039417831	0	1.30250458352114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123884104-2	4.17815869348648	0	1.38558649883909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17131269-1	5.35300673928731	0.0279803554352288	0.719347019690073	0.0388968810175707	0.968972603276286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19465900710328	2.3697525094638
Merged-chr13-52818949-2	3.07072974879028	0	1.3922416642137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58677453-4	17.6437147493086	-1.16254768133439	0.63330830228315	-1.83567415292563	0.0664058628671304	0.457015009469774	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89815644318883	1.56104072393284
Merged-chr7-83801675-1	5.67642244335639	-1.48690700702123	0.966271918771514	-1.53880804992412	0.12385116405862	0.725390173574847	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74168238898549	1.29606516661881
Merged-chr1-156464433-2	5.55291395327934	0.0790113839478507	0.838263118900314	0.0942560661042834	0.924905748652339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75969035015151	2.96122493412986
Merged-chr13-99242231-2	2.38917610329747	0	1.54521283589793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-25726586-2	3.97950104028871	0	1.36910525273798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124261925-2	9.16834489846295	0.442929660910775	0.507643141329208	0.872521708361924	0.382923830709762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69303615113461	4.08892887812029
Merged-chr3-41390017-1	2.54017498020419	0	1.39493879383971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40217831-2	4.62299646642395	0	1.36965005461476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101964768-2	2.51690732788411	0	1.37463650858705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61231543-2	2.96603365312734	0	1.40532281974137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44571685-1	4.09508602459054	-2.57713010931302	0.952322795168813	-2.70615186613924	0.00680679098108916	0.0823849904519823	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98118599163164	0.683637474991079
Merged-chr4-148082425-1	3.58250498125491	0	1.31606376468087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55517057-2	3.64613400948609	0	1.33899234507148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-67647177-2	2.82465125006009	0	1.4455323650053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79038394-1	1.99261093425902	0	1.37063870897198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135682437-2	2.36344262890452	0	1.39858284378461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34781991-2	4.63987143803623	0	1.34408414926002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153002575-4	16.6410289576472	-0.852365153234578	0.375796602647358	-2.2681555586984	0.0233197270644818	0.211381729054741	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92465567293142	4.26931330750396
Merged-chr19-42565119-1	4.38788672659086	-1.19774628008135	1.04175675913186	-1.14973698954397	0.25025221444097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97630052750634	1.03956264035389
Merged-chr5-74827888-2	9.46954096955739	-1.69091116661185	0.681535216577686	-2.4810327118571	0.013100235021466	0.135762156002514	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25505516605338	3.38036877487801
Merged-chr12-102422275-2	2.83971177160028	0	1.32507803678278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51132608-3	7.3067241469241	1.32341591174326	1.1982850102805	1.10442499104072	0.269408824925613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.581381506691384
Merged-chr11-59941658-4	4.7212339572918	0	1.32692244136853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160176350-5	9.84722088741491	0	1.32714857237111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133907296-6	14.4492151423008	1.47580306479641	0.416151240158813	3.54631422997372	0.000390660072775548	0.00911066135460063	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22112671402264	4.69945705739235
Merged-chr7-115020237-3	8.22259437844877	0.927972569590849	0.774172395451412	1.19866398626853	0.230658626913916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06963715943972	1.41926493179619
Merged-chr9-119064509-5	8.77644553934262	-0.235240596719489	0.599496134546615	-0.392397186843241	0.694764764296874	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84941587283159	2.64928226944878
Merged-chr4-133176109-10	21.8056533468044	-3.46008856625774	0.626539541388697	-5.52253822414561	3.34137075781694e-08	4.95113862903188e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98277970341654	1.26501898168246
Merged-chr12-17522700-4	12.0865188170885	-2.36030454016163	0.931362911982316	-2.5342479390101	0.0112688966758389	0.121434628934183	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10804128742059	0.73596151290311
Merged-chr5-3905673-2	3.81913673129729	0	1.32063288290612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79539861-4	6.57755690552417	0	1.31321006027589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31172466-7	15.9940128568889	0.613425099410952	0.395314604508079	1.55173902612145	0.120724680680525	0.713537896504122	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0758872473048	4.55545008020739
Merged-chr10-13268294-2	6.33755448926061	0	1.29994512764251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-17878627-1	3.59256639740922	0	1.33333780261805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66931757-1	3.03814679913848	0	1.34669865972486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14351694-3	5.71557581750121	0	1.31934512154274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95832141-3	9.82578271491865	0	1.28811204223073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55097306-1	3.17876062741018	0	1.31770131594696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126141078-1	2.79643089430544	0	1.40920528287901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115323731-1	5.44024216466711	-0.825647890567755	0.819382498065451	-1.00764648075483	0.313624206454664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41231472318554	1.80505237968249
Merged-chr11-69428940-4	5.74053057851059	0	1.29613666315545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68865994-3	5.30746139870911	0	1.31091894803426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100080978-2	4.11997335487432	0	1.31045482020953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54626339-2	3.08476182750064	0	1.32890963487454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90575561-2	4.00210986224259	0	1.32275171544605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16856864-2	3.41124052858331	0	1.37318278160762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75118251-7	15.486016341561	-0.0981923693769974	0.457489790481495	-0.21463291950986	0.830053525961516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71036329349388	3.59365278618262
Merged-chr17-46637302-3	4.09875825029659	0	1.32669862533229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-13359015-4	6.45796212518141	0	1.31003240984019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106865583-3	6.51682583761292	0	1.3013223870114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107213577-1	6.18654216158527	0	1.30873333757957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24697251-7	18.4188417249611	-0.091726032370481	0.443782300063971	-0.206691506978216	0.836250790630784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60035775836775	4.40443274967717
Merged-chr9-95578636-3	11.4133638867638	0	1.3217335554693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75876100-4	7.3462820381628	0	1.29297337460441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74000696-3	3.51278823928826	0	1.35771206099188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-80331293-2	3.39915208345249	0	1.37797770538068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64447754-2	2.8813222691243	0	1.40255553698773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97108315-4	9.95606729767617	0.34033227880975	0.664315646645894	0.512305077455386	0.608437512257371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96053602462968	3.61327978179526
Merged-chr3-107771164-3	5.19282672058764	0	1.31495907617645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73390385-3	4.00319139431058	0	1.30499174764099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43575167-3	3.75812295241328	0	1.36218160956035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80660019-3	5.30751214580885	0	1.31291340245476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164586744-3	5.14269189627448	0	1.32260013623677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31198632-2	5.61911079768208	0	1.30320324720444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88519453-2	3.43687260963513	0	1.32164299179491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34195673-6	14.8626020881787	0.498416938279957	0.42897200338346	1.16188686988605	0.245281421234322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50934692782223	4.12074653229175
Merged-chr7-92653548-4	7.63522387028335	3.20253551571038	1.04255180491617	3.07182386583457	0.0021275522488112	0.0339919386921312	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.41926493179619
Merged-chr8-82875389-4	15.9702177452011	0.330029022200911	0.553977282559186	0.595744685912551	0.55134580106035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52876105264247	2.57219868772826
Merged-chrX-7312759-3	8.46978087528844	0	1.31224167114177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99828683-4	4.50588493434862	0	1.31329815598183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116021485-3	9.49557247143603	0	1.29191490429473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97401574-1	2.00240482191048	0	1.47254245330448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108320646-2	2.88998366009389	0	1.32697014927158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27413513-2	3.58106284632773	0	1.40094787032148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47507213-1	3.72902122834807	1.92646714209163	1.2812083657032	1.50363297154579	0.132675896622035	0.761060578943062	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.688405034366054
Merged-chr8-31116223-1	4.31801260720689	-0.378348743731939	0.697941976994137	-0.542091973549711	0.587755147783607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6307415496304	3.31592518130475
Merged-chr3-146328992-2	3.5153499152825	0	1.33419084180413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-42144180-1	1.45086785787858	0	1.78790400997317	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102052399-1	3.75335569819254	0	1.31955293717242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76160090-2	5.53279057770638	0	1.37534552879627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62448541-1	2.67254869033458	0	1.38059750271991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144977250-2	2.51886927336346	0	1.55985833644715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133111920-1	3.06420280006629	0	1.36516251678864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38015044-1	2.44720030587557	0	1.34142936518757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64430256-1	1.56431585751372	0	1.48038106831343	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192081232-1	3.01727139496176	0	1.32861975142234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133589411-1	3.64802462085622	3.05843439972951	1.09127572074398	2.80262296832226	0.00506888886051787	0.0658774088065634	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.635744023561357	3.54080967572873
Merged-chrX-96316713-1	2.10114767532	0	1.44671344078823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83687257-2	4.84497667664595	0	1.32431270930276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84248348-1	3.00793400861571	-2.85671334681484	1.21445146947549	-2.3522663676702	0.0186594075096843	0.177639516772703	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46159083012986	0
Merged-chr2-158080040-1	2.17425773473457	0	1.45516912334596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98889347-1	3.25667177025203	0	1.36799514200236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76130039-2	6.65115060127229	1.48347114823617	0.609801834773839	2.43271020787655	0.0149862897835562	0.149487725873342	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00703195229196	3.32748024243183
Merged-chr13-93899832-1	3.03330406457814	0.191506320199832	1.0076425368887	0.19005382681754	0.849266951409071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1137379207019	1.6995072319729
Merged-chr8-83198542-1	2.69254644769711	-1.38780301094087	1.07166916161265	-1.29499201866786	0.195322982800321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29058230082393	1.08764913775046
Merged-chr8-40855634-1	2.29283956603328	2.74035014801559	1.38184882162092	1.98310416099001	0.0473557959264769	0.356598916296861	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.24302299519605
Merged-chr10-96605360-4	8.08373684231985	0	1.34204385209164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137948720-1	6.12181698928096	-0.739324159336007	0.644824361700812	-1.14655122115104	0.251567146308078	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33460399125475	2.31387409893957
Merged-chr19-9988367-1	7.9498563581857	0	1.34244339629644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8738869-1	2.42591836610555	0	1.41089635832894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103695958-1	2.06834608496596	0	1.391513002079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24466994-2	3.00277955961821	0	1.39308448249735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112532899-1	3.87669087351222	0	1.37063274621563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39571150-2	1.98340021801317	0	1.5440299547965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3238934-3	9.33301150258905	0	1.31291896971605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-6922372-1	2.73030824798304	0	1.34437366398189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87907479-1	2.05735924649116	0	1.44495346161383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70565616-1	3.71372706355643	-4.2226217204998	1.10382915144524	-3.82543051610036	0.000130543751709196	0.00391667217593623	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05086586576485	0
Merged-chr4-6924969-1	2.51080058475719	0	1.37624883750614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32211498-5	8.23189049593875	0	1.31577647739069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83041740-3	6.81095333182867	0	1.30685768451195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57324235-2	2.95708429697063	0	1.37964274685087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105262512-6	12.0836797819139	-1.35057782825795	0.496181537863303	-2.72194292853765	0.00648993494093012	0.079596713335214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96597526525999	2.12643658929939
Merged-chr8-44938145-2	4.52627909228887	0	1.33913570264201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28899081-3	4.58555375412716	0	1.34291685046513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145264298-3	11.0429280889204	0.877476193977799	0.509524947224834	1.72214569425313	0.0850431293830887	0.548591148338333	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43630989316158	4.39529352471637
Merged-chr6-117553598-3	5.24611746386852	0	1.30527167167425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101938728-2	5.10930165248699	-1.54837957692608	1.18821588182497	-1.30311301221452	0.192536181857839	0.991197550597136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.89544522622072	0
Merged-chr2-152197442-3	4.00583204656359	0	1.32960419853017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41243811-2	6.95099814397096	-2.18663745077308	0.802545845575106	-2.72462621647008	0.00643743199385227	0.0790715095996749	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52747024069653	0.845523456341755
Merged-chr4-150546932-2	8.75246315177809	1.02390568685086	0.492991820828532	2.07692226035325	0.037808734848512	0.303300956115498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26080223855019	3.98660594295366
Merged-chr8-71308163-4	10.0998421917591	-0.0285276369965453	0.551483480604712	-0.0517289057602673	0.95874470460116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24069328270871	3.20642815764035
Merged-chr5-73180197-2	7.78657740714968	1.55670438193612	0.76453374319072	2.03614869297899	0.0417354264601181	0.325407848402682	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61236910066989	2.52658010023757
Merged-chr8-25990254-4	10.0481839849398	-2.45788916038184	1.07736756146075	-2.28138404041913	0.0225257315952852	0.205807792263793	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79425917682203	0.423054662900563
Merged-chr2-163987639-3	5.66123422745398	0	1.31907572338627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8594891-7	17.7305822126099	0.812130512050973	0.400527554218821	2.02765203915853	0.0425957738129163	0.330656145827848	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83978877342789	4.62297216182801
Merged-chr18-50074458-3	7.34391363001166	-0.514430291912418	0.709474256776384	-0.725086621535528	0.468398891314498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89465603277937	2.97276763629183
Merged-chr3-126662075-2	8.18568996690912	0.289267015860833	0.814578873748237	0.355112347230155	0.722505426957247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99780768082115	3.94638090051813
Merged-chr2-18688921-2	4.7973557622607	0	1.31725207431709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54443828-4	5.01375500069615	0	1.33506471270312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114376700-3	5.34298520317345	0	1.31001870513528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5417384-1	3.07894812125476	0	1.37225492228676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23874065-1	8.50659111842358	1.83777893578875	0.618913330159035	2.96936395814341	0.00298416914910894	0.0442285137713026	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72889325915246	3.60450854562673
Merged-chr19-21032744-1	6.67726350511343	-1.356724852654	0.745654466097235	-1.81950878636202	0.068833843565964	0.469374553027391	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01737166472431	1.31470332505763
Merged-chr3-14667324-3	3.44771812528764	0	1.33378073424459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34114845-3	3.37509685478489	0	1.34264167855886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95838782-5	9.02499274735423	0	1.30217240956569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45691741-4	5.86520408246327	-0.538821081686955	0.942069012433479	-0.571954999660921	0.567352461628052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43905851998127	1.03956264035389
Merged-chr1-189973180-2	5.59351560734539	3.90910520259491	0.985692985559334	3.96584459853559	7.31365036399708e-05	0.00247891137697003	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	3.205015762469
Merged-chr8-125240793-3	7.58817640060847	0.584881939756259	1.0506492637166	0.556686193913349	0.577741851346413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.73596151290311
Merged-chr17-87246101-8	20.7454844710526	1.22572364789434	0.435580264310758	2.81400180018226	0.0048928954367062	0.0640487069725568	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07618788768705	5.18569505680462
Merged-chrUn_JH584304-42388-1	1.26050056329306	0	2.22616975175652	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47853865-1	5.2510489512627	-3.71527064607947	1.12609659345422	-3.29924685650913	0.000969446194741173	0.0186102911402928	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70208129197969	0
Merged-chr2-116977169-2	5.49414584712473	0	1.31001871173878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119126908-4	14.0012895531793	-0.935772061260122	0.537577596654902	-1.74071997620995	0.0817326749593626	0.533610088709612	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75271763802884	3.49523235442522
Merged-chr17-33818253-4	12.6984104155395	0.872045952569366	0.460832378277651	1.89232786947092	0.058447309901679	0.416150333137903	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61094227420083	4.11460610860979
Merged-chr17-55736867-4	5.53943575472161	0	1.31337013851748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80961004-3	4.62595310297106	0	1.30786599276061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21986180-4	6.18391972044532	0	1.30560535002836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34612901-2	3.3362692106297	0	1.35398989074588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4905295-1	3.26231118816349	0	1.36037490041602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36725270-2	3.49528779919659	0	1.36091339331087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110117005-1	3.63470020058469	0	1.35232990236297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46135454-3	5.39534763412287	0	1.30975501762087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15064333-2	2.27261874979468	0	1.38259900379149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45801444-2	4.13852119934847	3.78810572151947	0.935071881133049	4.05113852523223	5.09690197839356e-05	0.00184996544464607	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.990930719227866	3.9258761899202
Merged-chr14-32169064-1	3.89584781121473	0	1.38393656987002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108057035-1	3.03129987951022	-0.663457088718875	1.01162874950484	-0.655830598965891	0.511933126095686	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2642979481152	0.869764003783424
Merged-chr6-54927075-2	3.40333528599495	0	1.36953912186531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169859903-1	3.4946000918355	0	1.39152402880925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40894101-2	2.47353655191489	0	1.37215222869648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3657593-2	4.37711778290488	0	1.31603918022274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172530678-2	3.36068640005855	0	1.37521172292402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87274585-5	12.7794568617389	0.258619570150158	0.517850569386857	0.499409647181364	0.617490824300138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56825840905172	3.6793759824031
Merged-chr6-97971586-4	7.99831438886933	-2.60240448840874	0.96104832690273	-2.70788098325479	0.00677143008097107	0.082059235393513	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67055365168163	0.609949614787909
Merged-chr8-111525387-6	14.416391741444	0.89140763486529	0.457584728077169	1.948071209918	0.0514064431257312	0.378288900055634	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75244399562204	3.62338277974788
Merged-chr5-92489166-3	4.04092789565773	0	1.31898675023676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-51888583-4	5.9275900150957	0	1.31472787471992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161180827-4	9.63249893134061	-0.109096811773894	0.672410288779304	-0.16224738614864	0.871111045361047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89758235892455	3.46935039169561
Merged-chr4-108454883-3	8.76502548434025	0.988076990166086	0.616462605484975	1.60281739942484	0.108974974254243	0.662116154515644	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21631682583705	2.66223990676383
Merged-chr4-137739361-6	12.6137423936163	0.297819966109082	0.444640430571036	0.669799563046038	0.502985572171971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42952322060074	3.99754678527895
Merged-chr7-125878187-2	8.54189993734375	1.95874391535174	0.679783377708906	2.88142367051303	0.00395883107897231	0.0546690143039993	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50599425456572	2.90468819810421
Merged-chr7-98869263-2	3.15234743501705	0	1.33412312787825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33663639-1	8.13913273987899	1.29246723005349	0.689321737344124	1.87498400243871	0.0607949243888566	0.427816619547084	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9074944094686	2.59989026816624
Merged-chr10-93803029-1	2.8500920381289	-0.947130268099399	1.21927171806084	-0.776799997957581	0.437276777976798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19989166040843	0.733321818366247
Merged-chr8-45358618-1	3.10727902657186	0	1.3610387475811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20730058-3	6.4892214757747	-4.65164971360096	1.03546153922579	-4.49234427101848	7.0443426520342e-06	0.000383280278884119	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43965732371094	0
Merged-chr5-121916887-3	8.19748361656683	0.441008641270315	0.640761191569454	0.688257414888263	0.491290693720839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48513182468164	3.13986413283586
Merged-chr14-62893461-5	12.6462665728417	-1.02044745648869	0.480151796882312	-2.12526010131501	0.0335649155276712	0.278908058249136	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39222850571454	3.12719249402971
Merged-chr5-36751829-4	6.10148613434037	0	1.29025528844151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-73149-1	1.38756580813033	0	2.19888600742257	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31447398-1	3.15102403583	0	1.3264867713506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72437585-2	3.20603059103368	0	1.33316616719175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90977104-7	14.3102506386637	1.05770415364994	0.447597437855951	2.36307017018792	0.0181242375273227	0.1735814781563	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28245968139184	4.43655308195336
Merged-chr16-30604256-4	5.55913802669019	0	1.29118280944122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121451324-5	9.5313482872038	0.517788789270907	0.541599312035017	0.956036645108274	0.33905372093456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72555967929354	3.26702399068743
Merged-chr14-121931192-5	9.30824290248165	-0.304878285023225	0.519840497854053	-0.586484289473	0.557550116035717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82111441461431	2.91991443973346
Merged-chr8-3754477-3	6.26749434005518	0	1.3382155479293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79877374-2	4.48054474037878	1.34709831011444	1.32516767639565	1.01654932738658	0.30936787037125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.469435083901436
Merged-chr9-7554553-2	3.93036690454991	0	1.32803216723356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11005958-2	2.56341151592785	0	1.53715560926009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96993327-2	3.80343167332098	0	1.34142779267498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131701148-2	4.16945786804446	0	1.35418086490191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49004540-3	4.76306473985494	0	1.34141658460516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12124748-4	5.20506236153642	0	1.34885751320394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23234729-4	5.01314203400485	0	1.33518913779684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118575151-4	5.69138227263282	1.94672101235441	1.30266580465229	1.49441322970325	0.135067645804044	0.770034058865036	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr16-91640399-3	4.35748725286846	0	1.32384571679367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98238648-2	3.67668997359435	0	1.33817834025529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125400952-1	2.536696267446	4.80598892107979	1.47369821284993	3.26117578156363	0.00110951235464785	0.0205738349395058	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.33710883062617
Merged-chr8-13632563-1	2.97738596880474	0	1.4112378600127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123201235-2	5.22998839467899	4.42615123341057	1.08060990812202	4.09597506014242	4.20395190230134e-05	0.00159253009279875	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	3.2099105260436
Merged-chr1-144296464-2	3.79687103617873	0	1.42137645137142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10923046-1	6.77727004135969	-0.00514290810446994	0.604231516109079	-0.0085114860237471	0.993208898709597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88791516997179	1.83247173307855
Merged-chr9-116126713-1	1.58747070309562	0	1.57401310690833	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118101396-2	3.34204958194101	0	1.36153014484503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192532406-1	3.30995140092302	0	1.38224800757969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3513502-1	3.28987630124201	0.542118545296912	1.17692623932522	0.460622362882935	0.645069564476102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40764612753048	0.961371261847668
Merged-chr5-64233511-3	4.69757713162142	0	1.36856123308005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37401860-1	1.76683002210952	0	1.42286820037483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24114706-1	2.46969738505905	0	1.4871109396451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76325221-2	4.04104771505449	0	1.3272238269281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24307672-1	2.33444668757295	0	1.4033330658719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102396103-2	2.47128254215894	0	1.34177005770719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35741370-2	3.74509682799154	0	2.04836059080292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33753080-2	2.47511344132197	0	1.37838263684827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104144554-2	3.29527515546952	0	1.44938314575373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74342326-1	6.82314800447989	0.4260081233077	0.706485174993976	0.602996550226737	0.546510984167517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50938512838493	2.77284030825146
Merged-chr19-44750902-1	2.31011296344271	0	1.3796014988749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-87171275-2	7.11429844471977	-0.999645725121972	0.7167340670852	-1.39472333049176	0.163099286654763	0.879218444624826	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6184292270821	0.843323834477631
Merged-chr10-88740067-1	2.12964723305666	0	1.37631096413083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79139044-1	2.696048670699	0	1.39317194870056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105978771-1	2.20521549691475	0	1.33643955091692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99335198-6	11.2447307121356	0	1.29138075326179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41437593-2	3.67315437579744	0	1.34801466797983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97386367-1	1.64205884401281	0	1.42102490774092	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61916245-1	1.58340607858296	0	1.49961375159024	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101936050-1	2.7464677418153	0	1.36094692393124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137948336-4	5.2405779300402	0	1.32107715958479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37504745-1	2.11762471420414	0	1.43515742378849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157554375-3	10.3880197009128	-0.0188778414813046	0.547093552591441	-0.0345056917448307	0.972473903696562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8009012416646	2.82333931509604
Merged-chr13-80862451-2	4.52821820020709	0	1.31082102479299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57557719-2	6.61766476462812	0.53316908694941	0.798836567773247	0.667431998557122	0.504496232369217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84650408096437	2.54208616949709
Merged-chr14-74929008-3	4.1843061546725	0	1.34415457536094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129255176-2	3.56084171148813	0	1.33181522779112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80024783-4	12.4138355522084	-0.766582649951709	0.430485200567813	-1.78074100791521	0.0749547705908262	0.500817427303489	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36456439063896	2.93178510513161
Merged-chr10-21907271-4	6.2304718001957	0	1.29624256803511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29043089-6	17.4343120628094	-0.0269199527333128	0.439272687278022	-0.0612830105603056	0.951133820977534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70861404351927	3.84902670068461
Merged-chr6-124360777-4	6.76208340895164	0	1.32633795831311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145304786-5	16.1154053800154	1.53262260281653	0.541904472859161	2.8282154504653	0.0046808292655153	0.0618926485601705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14954966577018	4.66723631034282
Merged-chr12-105722864-2	3.33765949929683	0	1.33871037683727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144237514-2	4.43711794003363	0	1.31931680511572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115492599-4	6.94386281500652	-1.09649382923946	0.775959602112611	-1.41308107568251	0.157631886839851	0.858813846709766	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54640680796759	1.22548804685604
Merged-chr3-27616511-2	5.34547081078337	0	1.31091613421915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121197584-8	15.7415151523457	0.533409256334777	0.379239250773696	1.4065243912558	0.159568466964389	0.866403077877437	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91865768260004	4.1747963068604
Merged-chr1-106401071-8	20.2997574118719	0.0860662247119977	0.411828985087606	0.208985350299444	0.834459674883138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0063155749012	3.93460653114601
Merged-chr1-171118440-3	4.64209897233228	0	1.30689242672447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44170238-4	5.25243149691617	0	1.32913003613459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51907400-3	6.48775989712204	-0.68898527111261	0.854658970502549	-0.80615227230047	0.420155054530713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11025373088148	0.843323834477631
Merged-chr8-88207462-1	5.40801815905315	0	1.30926409890884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76903901-1	3.40601880712582	0	1.34862379113479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41013560-1	5.5830254622972	-2.17141110535683	0.70526613864192	-3.07885348010349	0.00207798852463329	0.0333550081382184	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00482026500378	1.51144536133504
Merged-chr2-62630669-2	3.81103376016382	0	1.34830758449016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77008442-3	9.20509708660832	-2.46647833768996	0.689770660368359	-3.5757947958714	0.000349165463720307	0.00838536067338008	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09121063435793	1.17564474993106
Merged-chr5-100559565-5	12.3789971297648	-0.516536666412628	0.674136107475257	-0.766220145583267	0.443545323396002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87593672213133	2.00110701584433
Merged-chr7-79997276-4	5.64837118643026	0	1.30632395829705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126570772-2	5.11755669550641	-3.14757413263018	1.04098979594437	-3.02363591352472	0.00249756813908306	0.0385161512635119	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30348710869188	0.563523181795778
Merged-chr8-72183674-2	7.72611962280536	-1.83458570655972	0.722335138725474	-2.5397985065447	0.0110916348875629	0.120157345590825	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84278520752145	1.58458601743443
Merged-chr16-52932145-3	6.28881949253778	0	1.32198592176504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80919121-5	11.0294074730578	-0.838938891612583	0.550613122302546	-1.52364492895542	0.127597433299287	0.7405073137564	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49361150833252	2.4587860866611
Merged-chr4-43052849-2	3.39526736386419	0	1.33001227894044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137900440-1	2.32388313016033	0	1.35695124960394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183273357-4	5.05466123534507	0	1.30560180293185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90362930-1	2.0787579479036	0	1.50195381632016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43574195-2	4.20947426889057	0	1.32711784098957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70937694-1	3.37118350982141	4.31937453183831	1.3722076807119	3.14775568782521	0.00164529143078038	0.0278676033788944	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.20192767614962
Merged-chr1-14740210-2	2.62883142598795	0	1.39938479627113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139366734-1	2.40570867740194	0	1.37324972202749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68884504-2	4.06348389725522	-2.22734763251278	1.17633234870052	-1.89346797694828	0.0582956629203027	0.415463888012881	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23172330808469	0
Merged-chr2-174335879-2	3.95370566720696	0	1.3092503902078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20847154-1	2.18185852728101	0	1.37974039403784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3376233-2	5.37331386826753	0	1.31154137113096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131253773-2	3.21625071259822	0	1.39589806257147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22021064-2	2.23565213461669	0	1.46731658861046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83504676-1	3.70938822152149	-1.29000297283987	0.780393176197384	-1.65301672565317	0.0983274596270123	0.612750922829176	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39546538596549	2.1552264446993
Merged-chr12-46857002-2	2.52400804883356	0	1.37126325290946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126682476-3	5.49619936386738	0	1.34927157461034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126707876-1	3.0522097195691	-0.955048358440688	0.995502344346595	-0.959363243958547	0.337375784990979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9106237139751	0.963545719069792
Merged-chr2-33871534-1	2.73264764962498	0	1.36474064004143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121903988-1	5.08712174402522	-1.07480964680423	0.937113646466689	-1.14693628767088	0.251407953813399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9252812592637	1.23021119707292
Merged-chr4-43479684-4	5.82086082300507	0	1.31661253739407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96238444-2	2.50446633349805	0	1.40147497867368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29389336-5	14.513035293484	-0.831194736890503	0.55494624966316	-1.49779323203827	0.134186979770571	0.766422377650892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54728681963122	2.12000018760685
Merged-chr7-127849325-3	5.31145499613769	0	1.29899453361647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51422240-3	6.72723068665135	0	1.3017358130884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24625255-3	5.25763832275482	0	1.2973619292174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61643432-5	13.2245050190887	0.465858329310405	0.421482028218194	1.10528634229035	0.269035534025492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60232100067097	4.04607129667571
Merged-chr11-102573009-3	4.09550888099186	0	1.31672428439011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48615917-4	15.3458522630201	0	1.31485116158811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75844451-2	4.34945628755327	0.244776688427413	1.31120565842808	0.186680622413466	0.851911050076409	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	0.306240821987646
Merged-chr15-96666906-3	4.59925077822805	0	1.29968364405928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3818171-3	7.29089970637488	0	1.35105325745582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57581810-3	6.48667982901224	0	1.31983443799862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167175532-4	7.16898999305762	0	1.28881123845459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69462130-4	10.3549335900639	1.40017519360714	0.644939054825476	2.17101939032988	0.0299297066649689	0.256261348496994	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8095759971525	2.55101630593484
Merged-chr8-18935684-4	6.10977239085293	0	1.30923262765241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145957656-4	10.4400920598666	0.272159922000036	0.526639261639557	0.516786236469981	0.605305388982299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82912305104699	3.39774116377654
Merged-chr5-32722364-2	7.66409761964386	-0.34283918429449	0.460760659046912	-0.744072171881288	0.456832813709504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72289335876919	4.4026447925497
Merged-chr1-60015635-4	10.6382238128855	0.958250890103304	0.451974118383254	2.12014549313364	0.0339937774293195	0.28132692247927	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73901445790226	4.73438114671965
Merged-chr6-88500292-3	4.25566934444162	0	1.31745394430103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36253015-3	5.0247769541443	0	1.31520256584522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9249817-4	7.30469706474167	0	1.30323406463621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159676313-1	3.84456954507705	0	1.33396883657628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129546077-1	2.60532168393889	-1.68465376238248	0.999843634901546	-1.68491722463019	0.092004542850097	0.582063012593905	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41383440940098	0.73596151290311
Merged-chr15-4043279-2	3.71516810282704	0	1.32347740336873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116726298-3	4.58362970749856	0	1.3380989243822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41069136-4	9.6225578554838	-0.326792166656327	0.702573578267787	-0.46513586158768	0.641834166109983	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5305278518227	2.90612664010796
Merged-chr3-67557917-4	9.24363445157525	-0.998094422506403	0.823383125301239	-1.21218712387535	0.225440759222356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93251770762053	1.29072512625674
Merged-chr15-102224652-3	5.63679283268437	0	1.31024388409477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74249852-3	6.82121697526275	0	1.31075961165962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18646594-2	3.08268637326334	0	1.32916115908546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81074849-2	4.09714063337474	3.33075634122877	1.20917538362566	2.75456843261368	0.00587695983930117	0.0736406170007621	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr6-117874938-3	9.9131534215757	0	1.29976761508419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112197066-4	8.29673242773494	1.1576564372268	0.660492242246191	1.75271769020309	0.079650477642155	0.523520429692644	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78653073936635	2.39250117777372
Merged-chr2-131545587-2	5.07272469045018	0	1.31680035064253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99353078-4	6.48726091675159	0	1.31877712882948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70199977-2	5.30942832155932	0	1.32318951959472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35232157-2	3.55013130054727	0	1.34973162913254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112449343-3	5.18597107359477	0	1.30856849642766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115475944-4	10.7721819335597	-0.257912814190367	0.52205646665515	-0.494032409641109	0.621283290894087	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18897638193063	2.522943325831
Merged-chr4-99116016-5	10.6964498998918	-1.43577402048067	0.775574479887909	-1.85123938153326	0.0641351225199792	0.445216988819467	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35477695250441	1.15307255889252
Merged-chr14-54754219-7	21.9434375462686	1.13162565042995	0.354000857595981	3.19667488410853	0.00139021523563417	0.0244601520699383	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52325577418097	4.51561221397802
Merged-chr7-98980498-1	3.76535400863346	-0.378010242591342	0.951707680680445	-0.397191543438081	0.691226217758931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00849958970673	2.31205403547308
Merged-chr3-87181462-1	2.20228264711914	-1.91291740817765	1.08900037685184	-1.75658103416608	0.0789892480321826	0.520640649779201	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39319898210633	0.989878296978726
Merged-chr12-112844039-2	3.79967158981187	0	1.33732474481921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34314981-1	1.93026922642345	1.24471361941003	1.68848362567447	0.737178377381556	0.461013880862545	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.843323834477631
Merged-chr1-131283211-2	3.24708754544692	0	1.3261733344914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55080283-4	5.45302491165776	0	1.30024841976948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14893608-1	2.83694318638425	0	1.35561002434806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10345045-1	4.12457107250749	0	1.34432966889813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12313642-2	7.27362844634886	1.60572247335967	0.655897289899619	2.44813097734466	0.0143599443932655	0.145122939425043	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65821215472412	3.48214023357846
Merged-chr7-107215910-1	4.32591942547787	0.793084114807243	0.828140417180978	0.95766864936617	0.338229870264156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50932655614267	3.10140649903936
Merged-chr1-40239724-2	2.78172725687126	0	1.43359383084726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63674825-2	2.44226787557315	0	1.43039087575759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118240624-2	3.08253286223543	0	1.35490746568427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5174610-1	3.42007240767295	0	1.34732697370378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109348288-1	4.74495440268576	-0.0843184109215414	0.718254386695631	-0.117393520295021	0.906548218624977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82783371906016	2.18439272780961
Merged-chr19-41760892-2	3.84492362648102	0	1.37519500084919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125604317-3	7.6130824440625	0	1.29908145842594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77249872-1	1.24230822543516	0	1.47362701028072	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63484902-2	3.6894476411326	-1.22462911925805	1.26052528001041	-0.971522855335308	0.331287977465118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.808340254822995	0.382164212378408
Merged-chr1-57393116-1	2.62340140966905	0	1.39938922766002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118873528-1	5.34272568030538	1.12241280317525	0.966725230134969	1.16104635338683	0.245623049394814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58660161382468	2.58572782874502
Merged-chr12-119146748-2	2.35297895115891	0	1.52384932794035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45819153-1	2.15228509324847	0	1.40175463815928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47049369-1	3.10888260312225	-2.06943360827198	0.976702088031223	-2.1187971579373	0.0341076130500646	0.281959245103966	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47272249967935	1.41695929335733
Merged-chr13-119817712-2	3.28141881166781	0	1.31312295111714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23890462-1	2.2343195934495	0	1.55455839822104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17549806-2	3.24897641422537	-1.14341504438723	1.11537793966739	-1.0251368650237	0.305298613061775	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74911785875201	1.15307255889252
Merged-chr8-27137155-3	4.84926459882612	0	1.32856970126433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22743037-1	1.91867032570263	0	1.41880608079381	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60550118-1	1.66057819550217	0	1.70372800513061	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66192647-1	2.09340980046888	0	1.35999385029273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120865248-1	3.06595291856066	0	1.36793666325582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77963016-1	4.01892525938121	0.121547254086595	0.936227287238116	0.129826651864806	0.896703576225559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04305452510058	1.46894927517136
Merged-chr17-83862367-2	7.14543108692355	0	1.29790153768991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83407058-1	3.241482297407	-0.480283674268618	0.909529155875379	-0.52805748025347	0.597459441266774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34349488700097	2.55449967496659
Merged-chr4-19741165-3	4.34419884644437	0	1.33459937908557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61557194-2	3.15704542298567	0	1.35192333423258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60627629-1	4.48394309955087	0	1.31908329439801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53422442-1	2.75209459087791	0	1.34992909794773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115520456-1	4.60496255579531	2.57944678053494	0.78763672454464	3.27491938879083	0.00105692128181265	0.0198464304831407	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44528403643862	3.55259566091677
Merged-chr7-99215830-2	3.99171173536755	-0.605859691068033	1.11944436575878	-0.541214650410402	0.588359640640775	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05043648434173	0.666688015277142
Merged-chr13-58534686-2	4.44662233922155	0	1.32029086251612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78096834-3	4.36929564642269	0	1.31772437023418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3920993-2	3.80820000041842	0	1.34307838651517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45251545-1	4.29779774806494	-2.26013944160742	0.99291504657998	-2.27626668504249	0.0228300528073505	0.207923711602666	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80476434012144	0.666688015277142
Merged-chr5-92444351-2	2.687139132638	0	1.34104119207578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88245951-2	4.86767534369634	0	1.32216178083224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79171761-4	10.7373128620167	3.35954513436777	1.00838079406909	3.33162348403235	0.000863409851679238	0.0169685353888215	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.486851288245
Merged-chr2-35162824-2	4.13484512713981	0	1.36562782355942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116732736-2	4.18717645967322	0	1.36322015458171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29655686-4	5.60782076310508	0	1.30769373469597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48054417-2	9.5579801936331	-1.21254454667078	0.624201266238299	-1.9425538079698	0.0520700926379547	0.38187881843828	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13547147235805	1.74879361603124
Merged-chr13-51696679-1	2.77011484562982	0	1.3230566432111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48410691-3	6.53010535588635	-2.60591715038781	0.856665235341029	-3.0419317171782	0.00235065211649202	0.0367126465593421	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92420251114068	1.20539659680455
Merged-chr10-80748834-2	4.48570367681586	0	1.30445996712025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-40712564-3	10.4268386534886	0.859335289036867	0.649626635578488	1.32281412425714	0.185897198979009	0.967245669598083	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54348568023673	3.11444950341994
Merged-chr5-96968752-5	11.6301149791598	1.24799930178406	0.522725006450463	2.38748727606994	0.0169639899688586	0.164812502007885	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21697692038714	3.5243094440583
Merged-chr10-95973461-4	4.62268491917322	0	1.35342551430349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62011911-4	4.81441089435291	0	1.31010090021426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32566337-3	10.7782048916252	-2.42303038044353	0.483088973815693	-5.01570209997787	5.28401475742907e-07	4.84276617586199e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.4185279895818	3.1143152953673
Merged-chr18-83934448-4	5.15708302388002	0	1.32854039511739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163364816-1	1.84454246373709	-4.05592212506392	1.42039318599258	-2.85549252493042	0.00429701343784874	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64201320752537	0
Merged-chr17-71216264-4	8.61546036217585	1.41866475432564	0.698429905025558	2.03121994650805	0.0422326878555781	0.328504054573525	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39712074580427	2.81960882153758
Merged-chr7-104398259-1	5.07084113096625	-0.780242576951944	0.890418263341853	-0.876265244182654	0.380885854817471	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57608843520559	3.1690188381782
Merged-chr7-96544126-1	4.16927370551835	2.53310096946156	1.4769032621174	1.71514345890869	0.0863189281693436	0.555122200585959	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06732873512053	3.84492601506134
Merged-chr15-84126636-3	4.64763844874704	0	1.29804498434018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5840619-2	4.1183859318979	0	1.35108145146555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114852067-4	11.6793546464002	1.31629516532795	0.552113526874578	2.38410236528577	0.0171208392345318	0.16594161385638	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27329581026262	4.79043338640697
Merged-chr1-172357722-7	21.0372545234191	-0.616462009321664	0.355768640087564	-1.73276095714883	0.0831381649693383	0.539928186252988	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.06822942150093	4.39121416734527
Merged-chr19-9986533-7	27.2740501619133	-0.376732757383906	0.446234108167964	-0.844249129522171	0.398530206065093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24398875945959	3.99114209769268
Merged-chr14-77081136-2	6.01458540089813	-1.73810231160383	0.672785740595741	-2.5834410670844	0.00978201775455798	0.109118424750656	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8679187495042	2.33904733505278
Merged-chr6-103525812-2	3.81005159981475	0	1.34784381285792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34255214-3	10.7188911814463	0.265490590526111	0.621067636142204	0.427474521414802	0.669033738921112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42669978727659	3.30992332074145
Merged-chr13-89385852-3	6.5225524925908	0	1.29651442214089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99270018-4	13.849534934436	0.359406223021388	0.515473433988252	0.697235200349004	0.485655613287524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26574664096385	3.67049660463988
Merged-chr19-55828003-1	4.05116941831071	0	1.31406555755227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27436924-4	11.2079990358562	0.210790841944978	0.721820617276911	0.292026629469511	0.770266263582526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32499107449649	3.62370083362539
Merged-chr14-25832500-4	6.53112154209583	0	1.29367121292801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60808684-5	26.6048468808423	2.07571042155016	0.432079483848519	4.80400134498836	1.55525783150033e-06	0.000115096124866614	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02990561867983	5.19831108700737
Merged-chr15-84803864-3	9.07839909537553	-0.377149370116041	0.681342448032693	-0.553538637149382	0.579894631251813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03116570102382	3.77159043639261
Merged-chr15-30467405-2	2.61933965944686	0	1.39690021316864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54973976-2	3.15829224643203	0	1.34678967641535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42829682-2	4.59968694441137	0	1.30733155494731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42903221-1	2.47593360765595	0	1.37514664350139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-147606914-2	6.50046921076169	1.56674033849736	0.737841103036335	2.1234115747279	0.0337193781178866	0.279835722947856	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73892617266378	2.702840391643
Merged-chr3-152261453-2	3.70064583738822	0	1.33740768968356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101999723-1	4.70706197654959	1.22344347939341	0.962120453987007	1.27161154751828	0.203511171837082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0018156979048	1.26514550294121
Merged-chr9-66915992-2	2.57187566704343	0	1.39836370925479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35543181-1	3.94042612035315	0	1.37927186950749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67142362-2	3.18326819204187	0	1.3759731032513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100215503-2	3.23055123494741	0	1.35542239659428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61558886-3	4.28999457743866	0	1.3263527563143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82932135-2	5.61188761757327	-2.21270271023636	0.829546330760372	-2.66736483326757	0.00764486334648491	0.0897373702901576	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44496256953259	1.29358708977899
Merged-chr9-104252629-2	3.2356059159727	0	1.35808328663572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45608271-1	2.338681249922	0	1.37066003054249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8568003-2	3.81344135071868	2.50216986131983	1.25088060122578	2.00032669694284	0.0454649980520825	0.345982969920972	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr8-73917646-2	3.51441835111605	0	1.3919724646473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33871056-2	2.71311969856699	0	1.35755626558824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13291766-2	3.78057896942349	2.45061430184594	1.28923813136823	1.9008236277073	0.0573251181654386	0.410471967087305	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr7-83615991-2	3.87026078037205	0	1.3148842089745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-113660342-2	2.10236854525705	0	1.40369639219644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97900022-6	14.0152971858423	0.653105201160589	0.513948509014662	1.27075998802432	0.203814047208406	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04485405061666	3.71775650488138
Merged-chr13-75992880-3	8.73857663879438	-0.352722199567618	0.813792449061884	-0.43343017003196	0.664702286365478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57560480164552	1.19380919831911
Merged-chr18-6055808-3	6.15993228095294	1.33695780318477	0.818356660679722	1.63371041921294	0.10231966955417	0.632382590247498	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11839576119226	1.62042974503458
Merged-chr5-136458262-3	8.54761533205539	-1.47876032171122	0.587325291169173	-2.51778757691073	0.011809452009526	0.125848083988011	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80433565822632	2.04937768295532
Merged-chr2-53200705-4	5.27918471081486	0	1.29569076051752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119950304-5	11.0197820033174	-0.783198449569026	0.535776906801234	-1.46179956550382	0.143796143223482	0.803746257781869	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66237473786643	2.48853090112376
Merged-chr7-99531941-5	8.80774697934392	0	1.29330678647698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116648710-2	3.94627360776132	0	1.33454382099164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19276381-3	4.69993870106853	0	1.29658848283854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121309425-2	5.92198298415509	-3.03396079872229	1.11658976769051	-2.71716693678608	0.00658433881756366	0.0804224681070122	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59515539074881	0
Merged-chr1-131481630-2	3.7239932206694	0	1.32405317106682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33172978-2	5.15072427018799	-4.42288647561494	1.10271004001164	-4.01092428211524	6.04815063755997e-05	0.00212828460722668	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1667364770793	0
Merged-chr19-10759744-3	4.15199044103127	0	1.34195251433067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5011694-3	3.48474919306312	0	1.35356637693194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41565872-3	2.9783663715522	0	1.46621079251682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111920201-3	3.45744694118707	0	1.36180780787856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13301320-3	5.17082234228028	0	1.30728455391553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22061843-2	4.57503552931304	0	1.31076892655532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75803222-2	9.19485167448727	-3.19066544957147	1.06208739864512	-3.0041458486766	0.00266327620196145	0.0405674700916953	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80743091563758	0
Merged-chr1-121427115-7	20.0780706686621	-0.950279899299544	0.446043394506742	-2.13046513187447	0.0331332315340387	0.276186996256856	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05458590081091	3.89823853533638
Merged-chr12-40657092-3	6.0084738225821	0	1.30456149323447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72235207-1	2.45409210518375	0	1.40700357956449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149415964-2	3.46213009530509	0	1.37160342555916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88505932-3	10.6827849683954	0.444616348826732	0.71331016469036	0.623314191828088	0.533078073548155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61307789637069	1.5268023559189
Merged-chr4-141641854-3	9.71311775123145	-1.78397586483282	0.719036366670632	-2.48106486337152	0.0130990534247668	0.135762156002514	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97633419865489	1.628416560482
Merged-chr19-40697787-3	6.60237676186905	-0.433430989367101	0.692149873788524	-0.626209735464792	0.531177382448195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56421988812474	2.07669635013709
Merged-chr4-138922202-4	11.841778494309	0.553795117589923	0.520443562371669	1.06408294314617	0.287291127062173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04748358132619	3.52356215506686
Merged-chr13-100873607-5	7.70248979221985	0	1.29782232857207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148746921-3	6.76799523148232	0	1.3003391740477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82152169-2	6.90134741711703	-1.06582372350189	0.74669209589251	-1.42739387408129	0.15346639558913	0.84327882021728	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77699110113063	1.21444166002597
Merged-chr3-58502103-6	14.9134970646892	-0.168778491915427	0.477707396642739	-0.353309354432397	0.723856533360961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37429315505074	4.15054708799377
Merged-chr16-65423064-4	13.0492059046718	-0.607865379770265	0.415623664859299	-1.46253794277101	0.143593854735568	0.803196346698644	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51048299526656	3.19507807761741
Merged-chr9-94734529-3	4.75562994672814	0	1.33027119229518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104185910-2	11.8408469739639	0.00341342936255486	0.476347382340308	0.00716584049603586	0.994282535434351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98148428026441	3.88800985253908
Merged-chr11-54975726-3	4.31914919897484	0	1.30989437108722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100601233-4	14.2254600270262	0.624212658061461	0.746454639109021	0.83623655793275	0.40302183577218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18308118542715	1.76302217368042
Merged-chr12-104273723-4	9.19057917816593	-0.362993595360242	0.678959173982502	-0.534632433392228	0.592904051600746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87157524375341	3.81739003606695
Merged-chr14-102942476-3	5.49408754489506	0	1.30863352932726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138162874-2	4.66779345063124	0	1.36248216812835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-56524896-1	1.59666294709668	0	1.45489220760502	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77397143-1	1.23442607811574	0	1.53630594398174	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62555539-1	2.52920060052899	0	1.36252424478156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61113369-2	4.42296793300256	1.30130551015615	1.35663171409563	0.959217963604542	0.337448952742258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr18-42793202-1	1.44408273398939	0	1.53665120467061	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100153240-2	4.87653098923165	0	1.32024491005715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-65737474-1	1.19152636058539	0	1.82841690460542	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10741043-1	2.10876075296466	0	2.11784667568433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120812236-1	2.21683981832975	0	1.3684975588494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34396075-2	2.29104090821534	0	1.48144422335406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-68051107-1	2.45835187929038	-0.937218788285008	0.975291239619209	-0.960962992604069	0.336570775689879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23404245667457	1.45547307112966
Merged-chr14-74904593-1	2.55097544455817	0	1.34702713542398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99110448-1	1.80952639462491	0	1.36251382835348	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64900801-1	4.29979233061373	0	1.34034704594388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70931179-2	8.15676931693162	0.729487390619476	0.590413614049334	1.23555313302535	0.216624714787931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72605010270559	3.33195105682574
Merged-chr10-25286495-1	2.48458679361256	0	1.50293666846477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90841197-1	3.0779280475826	0	1.31672964845133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94665120-1	3.17948931312995	0	1.32044448559473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20109255-3	10.7552511045724	-0.920090437558689	0.5628328615014	-1.63474896455811	0.102101683369876	0.631333894917479	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3379737470895	2.82270540545197
Merged-chr4-156077736-2	4.11772920235123	0	1.34021436708279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-29786100-1	2.37880304352174	2.42021830735692	1.86804968709329	1.29558561749115	0.195118286830202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769022381030345	2.58636696354949
Merged-chr4-101048774-1	3.74197091253548	-1.93740150087275	0.902661700470893	-2.14632070892347	0.0318474004948162	0.268217583803874	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31871776168054	1.41695929335733
Merged-chr3-9499616-1	2.29781735099309	0	1.41343781038848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167829802-1	1.60530111352373	0	1.45558626495034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59751897-2	3.74043868314035	0	1.43785196624153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54832032-1	3.81632976371911	0	1.32937375540253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55000845-1	4.28211281326291	0.408485930002823	0.921034135994219	0.443507915764576	0.657398394937662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05770588325116	2.45785862478356
Merged-chr10-14054451-1	2.62941974039121	1.94153215105432	1.30957211020183	1.48256986837869	0.138188727661138	0.782570465182833	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr6-87130249-2	3.4713161010535	0	1.3299419952376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16974326-2	3.5839607060641	0	1.33771120476853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139281219-1	2.10779389199879	0	1.43942317236318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54233351-3	9.11213593734379	-0.896596557935923	0.790532420271464	-1.13416797963585	0.256724092729434	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07263280729282	1.59652745948425
Merged-chr5-35215740-2	5.56880235984258	2.48909145884254	1.22248640072931	2.03608928275816	0.0417413907181501	0.325415523487024	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-41580069-1	3.17210701568015	0	1.37749761738677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106398288-1	2.48712958725458	-1.5335783565165	1.36122724282758	-1.1266145051071	0.259905503659821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00113496145082	0.423054662900563
Merged-chr16-36706692-1	2.75545627676694	0	1.35281516931119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-117927684-2	6.32228669746796	0.0581398779738543	0.876351807484358	0.0663430798879159	0.947104685961109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77029607208647	2.05066483796074
Merged-chr16-91695358-2	3.28058265832584	0.101534536187543	1.36387778954011	0.0744454796215868	0.940655921671487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr18-69563265-1	1.24016298664464	0	1.52035520134253	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111007877-2	2.52833179238329	0	1.38459517816128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91260696-2	2.84552895220846	0	1.34761035566432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159811843-2	4.42288498473034	1.29954103118024	1.33215487210067	0.975517980976943	0.329303386879513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr8-37789619-2	6.2525801538752	-0.57148997823182	0.747738750879124	-0.764290974033261	0.444693862981002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89025958002394	2.8333152380902
Merged-chr2-58286960-2	3.58288738107538	0	1.33102095056859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145202851-1	6.96906799356765	-1.20166332003563	0.81182145976067	-1.48020639955723	0.138818173103873	0.78497880704927	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78412397242445	1.88903407179563
Merged-chr5-105395366-2	3.25043742063034	0	1.32316611088452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59548994-2	3.65962535286223	0	1.33864986630937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69533288-1	4.72114716222231	0.343367011358704	1.02955736889421	0.333509352400145	0.738749830974452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44135117490504	1.72320011534497
Merged-chr1-36003960-2	2.73417243797881	0	1.34246656079631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39484590-2	4.25737324080346	3.12860253905417	1.27947861680673	2.44521674528834	0.014476511314413	0.145938280233028	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.845523456341755
Merged-chr11-3671384-3	5.59387117459623	0	1.30798207723283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63508428-3	3.79245301960464	0	1.3401659453401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155629500-1	2.69068592082048	1.28377397381373	1.38584544203194	0.926347148735029	0.354265600703582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr6-28621169-4	4.71492784866105	0	1.31654213809908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35289163-3	4.24350872478201	0	1.31101119704374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19596822-3	5.72451948850422	0	1.29790903082705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-30448657-3	3.83676004418936	0	1.34947479576072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12987370-2	3.93404545072989	0	1.4351867318256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108268407-2	3.56200706807296	0	1.32750809007525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119458467-2	3.41806644256825	0	1.36161665278107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189806969-6	22.1411729534183	0.203690362994495	0.499043286141829	0.408161713925164	0.683154954337657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94156069858464	3.20595909847233
Merged-chr8-41276006-3	6.42453628696126	-3.17196188896724	0.926679984069678	-3.42293126375409	0.000619497404353714	0.0130040724011879	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77483695039686	0.683637474991079
Merged-chr7-98720391-4	4.50456212423304	0	1.33303301926308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34685938-6	10.657078820932	-0.900490697019949	0.65442148889457	-1.37601028129598	0.168818450217463	0.901569994108397	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46499836420727	1.72320011534497
Merged-chr6-73748574-3	9.55246453087532	-0.263446025047927	0.748986414508887	-0.351736720379193	0.725035719237918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75497765333383	2.2046848628481
Merged-chr6-100366045-4	6.77364752967936	0	1.30519531785595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98917581-4	7.51341719096819	0	1.29105572464071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9660923-2	5.41411369297695	-2.11687172454487	0.790759715835293	-2.67701007291296	0.00742824017022222	0.0879039808336366	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61180249852729	1.22548804685604
Merged-chr4-149160101-2	3.6254185347773	0	1.31927518021654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18689576-2	5.22668610925955	0	1.32023567064827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34790504-2	3.86149216740194	0	1.34374845452714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38368978-2	3.5508337818388	0	1.33039871595304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65529842-2	1.88335163026048	0	1.50348265316828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120862215-2	4.52778479676824	-1.36165102732182	1.19938384739878	-1.13529211709409	0.256252943990559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.982587073406392	0.423054662900563
Merged-chr8-71980981-1	7.38232359220358	1.08233475724946	0.747987051629012	1.44699664906268	0.147897862087056	0.820726859214979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05707176449736	3.19590355417038
Merged-chr1-88255703-1	2.87918360324921	0	1.41857752826512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170206083-2	3.35911171856006	0	1.32021639106788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79127890-8	27.824364491634	0.945440512344339	0.389602834525997	2.42667770498793	0.015237785761649	0.151487653792897	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19405169615984	4.06104810654004
Merged-chr2-76001551-2	8.61006128642009	-1.63106423441609	0.728447641154433	-2.23909604790704	0.0251496673684351	0.223748150286965	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97941973669442	1.7953101035406
Merged-chr15-101190665-2	4.51332464562202	0	1.33531949277428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6167280-2	1.78630240701288	0	2.43634960695193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67366008-1	2.23541209105146	0	1.36389185173233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32764931-4	6.63725710101418	0	1.31084657704869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-88483543-3	4.22090622452327	0	1.36812633458588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95839256-3	4.35396292695393	0	1.32479460892959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70367161-3	6.06160481032385	0	1.31141264856304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68359673-4	4.7717865759153	0	1.31836037068648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75658693-4	4.9629548039657	0	1.30836498419623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73584212-2	3.26331598848591	0	1.35836007036019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99112402-4	6.80515175864909	0	1.28961772457244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13869320-2	4.17815039294864	0	1.36734531566712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111157823-3	4.98283309449514	0	1.31868182110671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26530541-3	4.40194163807396	0	1.31232630315973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12210888-1	2.94782246575324	0	1.33604390339252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99640404-4	5.81541852302275	0	1.30322086155776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67956104-1	3.38401608597711	-1.41175046564053	0.777316400609972	-1.81618510111546	0.0693419827594693	0.472002208895863	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35595879981166	2.01259914296816
Merged-chr16-57030714-1	2.84039876275976	0	1.43927130448623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-5508585-1	2.49763679944198	0	1.336333751476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75716337-8	21.0384937483528	0.19928454634923	0.3289490332158	0.605821954851268	0.544632989111449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.99081327654618	5.15354170409194
Merged-chr1-156470280-2	7.96466581831616	0.661191714806354	0.713679919402715	0.926454138375802	0.354210020249973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89845460831288	2.62235589016187
Merged-chr13-3825911-4	5.94002777373148	0	1.307331228785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84615518-3	7.40885978685135	-4.63703107296409	1.07623794474594	-4.30855564571154	1.64324135878041e-05	0.000754597679767147	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41637352835233	0
Merged-chr10-127606662-6	15.8961826725943	-0.37282943062221	0.392571120269169	-0.949711813662138	0.342258705359889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45365550154211	4.06853476266889
Merged-chr6-134877014-5	12.3267715915979	-0.174724864852871	0.531185531459133	-0.328933780204655	0.742205740835387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1980735985429	2.30526401943093
Merged-chr14-60830250-7	18.8259400624345	0.5042908232607	0.464649877005434	1.08531358387684	0.277782791565872	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42178056071185	3.9942535298182
Merged-chr13-45355039-2	6.04414412176075	-0.00416874759275066	0.458577393568848	-0.0090906085891144	0.992746843657711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95788475185182	4.07914600159287
Merged-chr3-79233882-3	11.2671014422978	-0.893641649186822	0.616907730830933	-1.44858234793581	0.147454253743182	0.818652987689207	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64915567430575	2.21497457247336
Merged-chr1-191250935-3	10.9302890649264	-1.42754746351784	0.534634766020105	-2.67013586517146	0.00758205603753981	0.0891911852077546	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17821793780659	2.32418542787021
Merged-chr6-51168239-2	4.01833250756308	0	1.31079845614577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109262649-2	4.66823466294037	0	1.35438748785362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23005820-3	5.14926796938892	0	1.33115282322017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13540049-5	12.1752260799606	0.255052656416044	0.541931487510507	0.470636348494327	0.637900445980992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52006227670565	2.92732381405122
Merged-chr10-19124944-3	8.47856621701882	0	1.30361890740403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90438738-4	10.2603759825759	-1.82202445235231	0.609850631225588	-2.98765690984147	0.00281124945263304	0.0422696518020613	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9849690009681	2.21231472788707
Merged-chr11-78267988-2	4.0485146320977	0	1.32254276132296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111596001-6	11.18764377294	0.28200150850925	0.514468256877533	0.548141706974896	0.583594604761625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90684666714029	2.69286845201614
Merged-chr17-43060565-9	25.135932047017	0.505344948607058	0.375078510408243	1.34730445649107	0.177882197415124	0.936127089658427	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12069183486659	5.65242417698598
Merged-chr13-101538309-4	10.0011148639669	-0.00302822604706117	0.544979408629439	-0.00555658800885122	0.995566507031518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70838987244406	2.30923017122179
Merged-chr4-63594044-4	5.67098271392002	0	1.31717812752624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42876347-1	2.51561617532503	0	1.33324926608649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57944220-1	2.23970247317426	3.53974838331665	1.92085337552176	1.84279988698	0.0653582333315941	0.451755776950111	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	2.290599595397
Merged-chr13-94005968-1	2.41713918483898	0	1.34492007082253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57175420-1	3.80311260314828	0	1.35569912337941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-14618980-3	3.55968314836087	0	1.33872016569758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35035840-1	2.23277112776398	0	1.46325215286422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96148149-2	3.37448438788094	0	1.34760029675272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53109458-1	1.87591850629125	0	1.45642052149753	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13456834-1	1.44638904861254	0	2.16075444063566	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79664955-1	4.99218212367851	-0.924706333726183	0.820386499406967	-1.12715937475157	0.259675103379708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36158039317126	1.41293295987929
Merged-chr2-3769431-1	3.14161750547671	0	1.33241439671528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134141485-3	9.07324852124977	0.0528490419725554	0.462399687238221	0.114292988146699	0.909005540725302	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56474367208885	3.48071049881126
Merged-chr6-98997900-2	2.85370737343319	0	1.44889359331622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31935855-1	4.24233389758229	0.399899051581423	1.00233119400304	0.398968977493691	0.689916062861962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75393226743851	1.64109723835872
Merged-chr9-46175556-1	2.00286096757064	0	1.42002667606387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25018062-1	6.23198586538968	0.202159158360582	0.578925594715864	0.349197133804046	0.726941317828946	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41454698069817	3.44005335984012
Merged-chr2-11599636-2	3.07930179354754	0	1.34864635642155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87639472-1	2.27985184405491	0	1.38226877381366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124015477-1	2.06168009681469	0	1.42333926915042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3176011-2	6.72716915774792	0	1.38818937031042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76348152-2	12.9170003177188	0.12925745900734	1.02163498665346	0.126520196250076	0.899320163208794	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25218549581618	1.14227273603934
Merged-chr16-31192577-2	3.08036434866504	0	1.36289399246979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132803755-1	1.92338090307517	0	1.4646842762567	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38650555-3	5.68849321949826	0	1.3376531034253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-28176970-2	3.55052733980399	0	1.35252258469794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41042386-1	1.95139895597957	0	1.40132620683376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11523369-1	2.672518537835	-3.45722249574186	1.22102947693136	-2.83139970087406	0.00463447662125761	0.0613915486099128	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78842891971297	0.382164212378408
Merged-chr4-41529061-2	3.44369524243809	0	1.40535191405789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105655335-1	4.48484948065728	2.06556053104005	0.997094415782924	2.07157968026344	0.0383046565276366	0.306296633070844	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54198748042175	4.11177302607796
Merged-chr5-103805473-1	2.09367643330052	0	1.40524736020122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33372589-1	1.85912621311941	0	1.38561333066107	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54770222-1	3.13168033552716	1.75814442205698	1.20026914812263	1.46479181340864	0.142977726108408	0.800731874796128	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917785170076501	1.09662457429765
Merged-chr2-153191667-2	2.11006823501943	0	1.39561838927643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134526980-1	5.56928860188464	-0.357722413222045	0.73531521099118	-0.486488526110927	0.626620838455611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86839369554819	2.20026094593162
Merged-chr7-126667671-1	3.02174691080327	0	1.45057107377774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7914340-2	4.90762811094504	0	1.30779484556012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114722671-1	2.16734184362054	0	1.38973968439206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68163107-1	1.78163081073009	0.0155276758359679	1.32180858248737	0.0117472953661324	0.990627229968736	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31925312226969	1.04220233489076
Merged-chr6-67168917-1	2.64687556604482	0	1.383115083507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-65342244-1	3.45556456456199	0	1.43367014345592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24234979-1	2.27514217220078	0	1.41476011922371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171378140-4	9.88169669266861	-1.40489613378837	0.516509860153698	-2.71997931147009	0.00652860008259579	0.0799508809964964	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12596037342747	2.34574658350842
Merged-chr10-22055601-1	3.10508836643255	-0.572538220376187	0.906889511822727	-0.631320809108775	0.527830783489261	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.593942993847	2.91136621420107
Merged-chr6-16842692-1	2.21685206053002	0	1.36396865899261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126894926-2	3.81918391742167	0	1.35163437177366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161337426-1	1.61987418016368	-1.56173386526665	1.45148186612755	-1.07595823393457	0.281945935912741	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93540681122911	1.10669213789164
Merged-chr7-81538321-2	6.81574972907262	0.535088131035642	0.811944934133292	0.659020222358823	0.509882782939181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37055554184352	3.53175485027438
Merged-chr9-99379694-2	2.72068489338158	0	1.35913598272573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50501423-1	3.24617818646394	0	1.33385933616873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34177061-1	4.70134506573588	1.81328861211997	1.11058307771801	1.63273567597109	0.102524600699523	0.633229920350757	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26395015882105	3.35689265241174
Merged-chr18-60859310-3	5.06608605811928	0	1.30651729608363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80808341-1	1.89361338391417	0	1.3942643981252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7888512-4	7.1639143950378	0	1.28819754356721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5592639-6	12.0725735264231	-0.341097482185076	0.403759080415728	-0.844804485471553	0.398220009822509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20265054802652	3.76256330325872
Merged-chr6-17640933-4	6.78569037852361	0.488358022082256	0.860483314801874	0.567539211605399	0.570347893831801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2909034735471	0.793480537552656
Merged-chr4-117787199-4	7.30691436838892	-1.53615764136625	0.607361433489679	-2.52923145373266	0.0114312615639459	0.122738616194152	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64541446691693	1.98033324113269
Merged-chr4-129069070-4	6.39671079699536	0	1.3329850657005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65127598-3	9.10619732325511	-1.08865482481878	0.649310229835735	-1.67663279399463	0.093614309895847	0.590076270324493	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21519470743493	2.98492138201329
Merged-chr6-134047592-3	5.37779228294913	0	1.32743710776111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87422589-4	4.4573165301099	0	1.30526418857032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25393149-2	4.68949853186727	0	1.31813181130382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35444650-4	4.74215426361359	0	1.30122208499809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99630280-3	5.01462237825605	0	1.30888524245684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30928481-3	7.04218372405641	0	1.31024666070689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55577572-3	5.65470378534502	0	1.30843987909866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59001368-3	8.20614663333602	2.07101409658509	0.837425046931978	2.47307398336429	0.0133956408459901	0.138002766312797	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00967833035899	2.9148755136756
Merged-chr1-184628933-1	3.45588219890171	0	1.33629013859833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143853903-2	3.26273288162388	0	1.39798000960775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54032517-2	3.1340412660442	0	1.33155638772307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39840852-1	3.29083996999292	0	1.38880093081153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95180596-1	2.90954366199556	0	1.40362556916599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123580242-3	7.32794585602656	-0.941662808372686	0.649185370269528	-1.45052992796453	0.146910799674461	0.816553377360337	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24136539278773	2.50670197153503
Merged-chr14-47507449-2	6.11984499853215	1.61192995794883	1.01848405432628	1.58267569443207	0.11349540091864	0.681677570169137	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	1.32121820265614
Merged-chr13-95883106-5	13.1852646790121	0.929471095193516	0.455545246604266	2.04034857595814	0.0413156198472994	0.323408061157358	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09539133843581	4.40933044418577
Merged-chr5-97914113-7	11.9988298010846	-1.26384087390618	0.602479660730584	-2.09773201700055	0.0359288249100492	0.29274376465986	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5193007690005	2.0292145465841
Merged-chr4-145240328-3	4.31402197269687	0	1.30742812740254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72556339-4	5.00896926468865	0	1.30540855442392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45245683-3	6.52723320616425	0	1.3234352096937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146662864-3	8.88279100444441	1.35033315339102	0.526334746531274	2.56554058475177	0.0103015169263018	0.113460799775176	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89659782072417	3.67720860808422
Merged-chr11-29871574-1	2.73289957695733	0	1.32723767817416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65092146-2	4.27450749040911	0	1.32863521433006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152259655-3	4.9507934924706	0	1.31479019178219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100805618-3	3.18896925383289	0	1.36521882808401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122608482-3	4.94179920022644	0	1.3473062955352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83683213-1	2.32627510322344	0	1.45580987242631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-98605981-2	2.45183051304649	0	1.45846120440643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51789582-2	4.6427215779858	0	1.29962866066389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60403343-2	4.20935723649248	-2.86990782620537	1.0579401266775	-2.71273180195784	0.00667310911672003	0.0812182880128864	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29097950453767	0.916190436775555
Merged-chr5-44055288-3	9.5955416234849	-0.613217551721482	0.800483134859777	-0.76605930220991	0.443641017306361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72986859974202	2.82610300771204
Merged-chr1-107525805-3	3.89374792903108	0	1.32514498821021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-153635445-2	4.79663961733305	-0.988652672853186	0.678960654933956	-1.45612660419823	0.145357624296651	0.810040876453093	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87331172661378	2.1750991113525
Merged-chr17-23873994-4	10.1685750306134	-1.27418984033884	0.56790706400811	-2.24365907926203	0.0248543448921078	0.22184565241356	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39387538430765	1.5122114716189
Merged-chr11-82845539-4	6.19250929466256	0	1.29487950965441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12929967-5	12.244160615999	-0.454988439871527	0.525816230325269	-0.86529934534366	0.386874510054922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07095900921121	3.62911341882201
Merged-chr1-144263528-3	3.94948825575837	0	1.37285368630877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44265637-2	7.22321024250875	0.0601539444761234	0.700247334819965	0.0859038535171134	0.931542848173691	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39136998375538	1.85705179220891
Merged-chr2-59207409-1	2.56180548504613	0	1.37806241576376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-27369960-1	4.49613406498525	1.62912480701628	0.886901063994649	1.83687321298118	0.0662286145782078	0.4560833647621	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76608043940715	3.75723500527035
Merged-chr8-108625772-1	2.88051462267149	0	1.37731312539555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91403288-2	2.41264631446939	0	1.37358954264431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21820339-1	2.27085246215643	0	1.3571097953402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6165387-3	6.50836334695673	-0.509807152124963	0.888951063105439	-0.573492932607579	0.566310982977438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95906881010007	1.13404870833161
Merged-chr9-118617877-1	5.16418414199265	0	1.32636505506452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84749439-2	5.75100438715652	-0.133066706645289	0.650848120374519	-0.204451242124995	0.838000890315453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1760881738341	3.13178612559225
Merged-chr16-36602852-2	4.75704190258178	0	1.33550610300254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46786278-1	4.58581272493221	-1.3693504240284	0.757131455025002	-1.80860326821738	0.0705126603952252	0.478276967634045	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52305286913621	1.87757319456894
Merged-chr8-114452922-2	2.82898854746168	0	1.42474987640846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21334380-1	4.86707806545318	1.87472298896611	1.25096025298788	1.49862714222007	0.133970387315199	0.765715816452289	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0.735627456805112
Merged-chr3-65549918-3	7.89410511193109	-0.160791024962089	0.747185446155299	-0.215195606110172	0.829614816498929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74452086742924	1.75395548195819
Merged-chr16-92705826-2	4.46483159930239	0	1.33038597590013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4797481-2	3.08870778115368	0	1.37085611750385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98329610-2	3.52059188258584	0	1.34905884575101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114983327-4	13.0983769646646	-1.32200715673575	0.422750789420986	-3.12715479147045	0.00176506969057747	0.0294686366889308	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.41644420426422	4.04353386367522
Merged-chr6-71478267-1	3.04333959860253	0	1.36203546820025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173350139-5	19.7085844334363	0.540507189805577	0.341289099380161	1.58372239484715	0.113256906205709	0.68085425877813	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.79239406730589	5.27999314804075
Merged-chr8-115407727-3	4.07247384901587	0	1.36008884040352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99202955-8	14.5230506236202	0	1.29540687631365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94692696-4	8.16866288243529	0	1.30066454215271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181161656-4	4.98414349260801	0	1.33793809956048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95834935-2	5.25572848707685	0	1.32377714668424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68134786-2	11.3841885376586	2.60156559582734	0.696722653681686	3.73400460295056	0.000188459046915334	0.00521602917396419	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26001272775153	3.65491702058163
Merged-chr14-27042472-4	5.82801796147258	1.307736628744	1.30597514400133	1.00134878887302	0.316658213221868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr1-133613849-2	2.97118456692708	0	1.43120848949535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131091045-2	4.80412993182608	0	1.30578586312625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134431744-1	5.65314145276272	0.533969309112223	0.965076426668972	0.553292251635713	0.580063305909411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54327062862569	2.45916162824808
Merged-chr18-23885733-1	3.54970664407855	0	1.31166060221992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72863578-3	3.97853180137923	0	1.39420300384878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-7130903-1	2.14337073147439	0	1.3735002036226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88667985-6	12.8043892150721	0.546627748797374	0.570149198959148	0.958745096538389	0.337687174063802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89316573220804	4.11176840065363
Merged-chr11-67608339-1	3.81228787414041	-1.84719001169752	1.06235978667128	-1.7387612321861	0.0820767703884566	0.534787978642346	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10279006862482	0.61242769162773
Merged-chr8-79734507-1	2.96209224720589	0	1.38571158673569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89415911-1	3.55524269579781	1.84593852725174	1.04710937400479	1.76288988818019	0.0779190628257471	0.515459615019252	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.71664175267955
Merged-chr16-76680795-4	4.73375073974874	0	1.30739616209796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92992415-3	5.29284414704252	0	1.33201005902615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123471027-4	6.44494898971337	0	1.31134359258538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75933521-2	4.26067002905768	0	1.32371968436396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38814195-2	3.61411310370706	0	1.31436875477286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37197019-1	3.8997534104553	0	1.35396902067286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58592907-3	4.44092254211921	0	1.32094638312421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109477010-5	10.7139317510329	-0.672436955358747	0.681012029593262	-0.987408336619786	0.323442499123769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09570524010647	2.77580287295963
Merged-chr1-91483460-3	4.3330026171664	0	1.32332287027954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55729600-1	3.21499357142434	-2.57527734457872	0.97274214413709	-2.64744090723366	0.00811035329345114	0.0939679337435918	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85557399133442	0.994591904006138
Merged-chr1-191069422-3	5.07749973793988	0	1.33379813843306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136043955-3	8.93086018497689	1.06043655057706	0.433930373660038	2.44379424660386	0.0145337125642368	0.146313354062951	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11128314736205	4.0060675725416
Merged-chr1-13277984-2	5.77394703760872	-1.16951565845389	0.790190678222869	-1.48004233748255	0.138861948390938	0.785022309849837	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69947278641453	1.7094652900924
Merged-chr19-55292697-2	3.14194873022213	0	1.35446940464743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55191374-2	4.65213195561342	0	1.32480003679282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29024587-2	3.99100105630375	0	1.36937870412592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9913459-2	4.1354525144045	0	1.32685830132429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123935570-4	8.99784087766497	0	1.3022729638711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94337746-4	13.4490455207889	0.342211925667926	0.445779955913584	0.767670060370021	0.442683227699154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10423410509612	4.42302823226856
Merged-chr11-114973001-4	11.4012740466734	0.58090453506196	0.443323731839709	1.31033936002324	0.190081057810048	0.982174488747113	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27893980434912	4.74396774379757
Merged-chr9-92207552-3	5.00854922633771	0	1.33207430581289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8672066-3	5.55147176594812	0	1.31587909387409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126492402-5	12.6648570401952	-0.334712375392955	0.474013392862339	-0.706124300353177	0.480110841034236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0294189727628	3.54184396394587
Merged-chr19-6487315-2	3.68094499018998	0	1.3380482919189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20585816-1	2.44190947596237	0	1.34150388125935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134698459-1	4.32731314652513	0.724272918353105	0.751893295721971	0.96326556237964	0.335414270740371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26664426368473	2.82856958860614
Merged-chr17-6215963-2	8.2735117935752	0	1.31754275918626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67855835-1	1.39543463469172	0	1.53574309453663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99349871-1	2.74462318908702	0	1.33787905218859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156014088-3	4.91169304702391	-1.4881962569411	0.955301996285832	-1.55782806141632	0.119274012065355	0.707330936783982	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2417482842621	1.03300427768847
Merged-chr15-97351300-2	4.30644076820918	0	1.32524308789538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81836169-1	4.55186069971637	0	1.3086195947097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32480243-1	2.14280882018625	0	1.40892163563997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-91362192-2	3.59696454137447	0	1.34937055243708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180127864-1	2.63068728773789	0	1.39063954235841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86668067-1	2.42655438123694	0	1.46712701829372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117152866-2	3.99868569914887	0	1.31127738091397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135134329-1	3.02581183365814	0	1.3531439235044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46604941-1	2.0505320779854	0	1.40807007058506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76678733-1	2.93822257300942	-2.64213200261789	1.27915181279764	-2.06553434563742	0.0388724692781471	0.30951143870474	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39524826515224	0.469435083901436
Merged-chr18-61326613-1	1.52055749735137	-0.754896433404546	1.7334168923488	-0.435496179099567	0.663202311820867	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3909425981891	0.843323834477631
Merged-chr14-118813227-1	1.47290972663088	0	1.441933621546	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121990990-1	4.47404500289396	1.6628919549193	1.00549882186152	1.65379801424404	0.0981685595875171	0.612063067988261	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.721334244049718	1.64536602019594
Merged-chr17-81708762-1	2.52415608393246	0	1.40085297288092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35658968-1	1.65833733576544	0	1.47660382417763	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64209249-1	1.20983129386669	0	1.58108984486557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84843793-1	1.87322629456492	1.2758023878425	1.39676026424162	0.91340111864881	0.361031617455555	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr5-34974073-2	3.59055845702806	0	1.35037050022218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83235580-1	4.22381398505191	1.11491154710541	0.789422977000239	1.41231200457581	0.157858113257626	0.859831313572798	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97024318135867	3.25974245670388
Merged-chr1-39418044-1	2.56680760498852	0	1.41149692968631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-18043215-2	3.95332627641857	0	1.33914946731365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61590138-2	3.29135973596603	0	1.3268382468982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118662220-1	4.03531325655075	0	1.32411010250559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8530052-2	4.63783421822415	1.1535873364203	0.986855927004907	1.1689521285254	0.242422919233078	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47161704673626	2.61088064940404
Merged-chr18-14813220-1	2.30322480597393	0	1.38886354443829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35678534-2	6.88044419849426	1.98959143008206	0.805011421169334	2.47150708395173	0.0134544885593838	0.138478029516694	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30165985548024	2.56493919553409
Merged-chr12-41438664-3	5.77005321703892	0	1.33537536397706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165926428-2	6.6062758691712	-0.0484367902498805	0.697775775536527	-0.0694159813912097	0.944658508293226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25693389239555	2.90869966812203
Merged-chr1-58344012-1	1.36644631680982	0	1.75696262234465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33962290-1	2.85249354978465	1.72528335418569	1.58238181746866	1.09030787332076	0.275577548149377	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.10459859746439
Merged-chr2-181333218-2	3.56432070153473	0	1.41033649779108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47273127-2	3.19165800727061	0	1.35663452434699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57729574-1	2.20808862137136	0	1.42684128567004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43920643-2	5.35453962821167	-2.40232198308075	0.878578455488912	-2.7343283551654	0.00625076757699013	0.0774043316441154	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18235240497252	0.73596151290311
Merged-chr12-30922596-1	2.72041034329947	0	1.34661728256538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72389056-1	2.22808835700688	0	1.67428603202335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72570796-3	4.66373201782397	0	1.33278135792795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10521351-3	5.04339328420257	0	1.30507477793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128440039-3	9.33448094862869	-0.865454725187894	0.73924605123306	-1.17072620644279	0.241708847845057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24486893834308	2.19110052793478
Merged-chr7-45536268-6	15.1825307617194	0.525680513191255	0.504789055333724	1.04138651113131	0.297696200312927	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1824480285597	3.42196541827309
Merged-chr6-97496191-3	6.86101883575626	-2.52100673248064	1.0116561450878	-2.49196008418635	0.0127040313476045	0.132889007914289	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38533938821226	0.688405034366054
Merged-chr19-57073000-5	13.1989707828258	1.24106801651594	0.610749370256222	2.03204141822575	0.0421494631180434	0.328048930075234	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00988890591441	4.78107804327743
Merged-chr2-129304626-5	13.8290179989459	0.647464624272938	0.426868557907603	1.51677750042458	0.129322869497524	0.747391241325665	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03367567459228	3.77978588324802
Merged-chr11-53737780-4	5.69224543706346	0	1.29998991326468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160882174-3	8.83287311962005	0.00250633233296264	0.614103589860106	0.0040812859171424	0.996743614018705	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91605764469456	3.83455728926859
Merged-chr4-55591702-7	16.2874792140659	1.10074317700616	0.468645108931066	2.34877769132564	0.0188351485779677	0.178895584153471	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.203996254467	4.14176830104683
Merged-chrX-151508751-4	8.37898407406388	0.571359569298261	0.563639045678695	1.01369763801631	0.31072705148381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30400458820391	3.0524329430161
Merged-chr5-146675420-6	13.3832558606652	0.689581926017129	0.38691096441656	1.78227548308687	0.0747043187274049	0.499798656458796	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49684318845961	4.16294232910426
Merged-chr10-93271222-2	7.39002373837234	-0.527498203551392	0.550578416890098	-0.958080061566755	0.33802238866865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85442909251849	3.3949744081127
Merged-chr18-79596368-2	4.34643558948257	-4.36657641118863	1.18986856294101	-3.66979727609217	0.00024274289827881	0.00634502523242722	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78975821289083	0.420961122473315
Merged-chr4-131977436-3	4.44922384402588	0	1.32365671440434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150859863-2	4.33206658518788	0	1.33754671352526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61454716-7	12.8987674246529	0.614514432663425	0.586455512173199	1.04784492584314	0.294710059985085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.451230937338	2.88200448800609
Merged-chr7-122383477-4	5.33047971020428	0	1.30051200535936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6952421-3	6.04928577326853	0	1.30038221225093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66807777-4	4.60148307193666	0	1.30874891024134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111049283-4	5.85496887745694	0	1.31374444813368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9494307-1	2.02521333271472	0	1.42870785467034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25082757-2	3.65815456378928	0	1.34101677709994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43540296-4	4.71342484391811	0	1.3735311213074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60351456-3	4.89670220746933	0	1.32050844764276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57747245-4	4.82803127046802	0	1.30667898596614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131524027-5	11.5435292361342	-2.66601264000332	1.13606261545871	-2.34671276365068	0.0189398493093033	0.179628939472531	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37637017936925	0
Merged-chr11-17895930-1	4.08692605780359	-1.37257203932069	1.05876090727948	-1.2963947099705	0.194839533676252	0.999250534752035	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70845281204164	1.40918939303534
Merged-chr18-65389216-1	4.11083046985434	-2.04708088282102	1.08442648187656	-1.88770831128969	0.0590651199785356	0.418937298395462	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39199522147638	0.666688015277142
Merged-chr2-103657555-1	3.04854766279389	-1.54229884918481	1.24983961567162	-1.23399741042456	0.217203869198043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64258128850668	0.469435083901436
Merged-chr2-164926990-1	3.99885253382991	0.266877300706733	0.914858557692764	0.291714274805263	0.770505094000011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0183632429545	1.69928069889504
Merged-chr2-13432173-4	5.73527216233514	0	1.30548060814977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12518029-3	3.87552346451842	0	1.32118838860884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-60385585-2	4.15282019969416	0	1.33795161231486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128337859-6	16.393407454296	0.384637052368553	0.37991306031256	1.01243440289235	0.31133039610001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86539121204064	4.01428905101737
Merged-chr2-164523601-4	11.3755937325352	0.54392610815565	0.553826798700633	0.982123128443384	0.326039192472772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71866217843325	4.42984543443555
Merged-chr10-98775515-2	3.01766742995891	0	1.33352675224527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150176787-2	4.24621409515506	0	1.37745390448927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45231534-4	7.55440135838139	0	1.29682740656417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4170406-2	3.97081335850527	0	1.30389776624147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-76598629-1	4.46269728444753	0	1.33623118500286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33263204-1	5.51088417682891	-3.06551653169599	0.826972720891059	-3.70691372793157	0.000209800371960509	0.00567805850031465	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02821007457912	0.773587911294612
Merged-chr5-99965666-2	3.54295334296211	0	1.34767062326964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72862745-2	9.8513998750154	-0.323954982478712	0.601849258348075	-0.538265982694549	0.590393432644257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30941636785657	3.31403469222182
Merged-chr1-34511219-4	5.89239778194719	0	1.2974848097864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136554412-3	6.67152634552114	-4.99554814612234	1.03131683524181	-4.84385396942642	1.27344541591056e-06	9.82462386636263e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6681991163802	0
Merged-chr11-110464595-3	8.94096730641126	-0.569327206451065	0.604491134326502	-0.941828877416679	0.346280257993535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95746632220558	2.51050682664478
Merged-chr9-89267813-6	20.0583678013094	1.04693583102588	0.383768955092189	2.72803679696912	0.006371250040817	0.0784201804968998	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70729562541084	4.71664590371632
Merged-chr19-34959575-5	9.47720471478232	-0.556446750241595	0.660016805557027	-0.843079669421412	0.399183888258411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08975446888624	2.08364730863447
Merged-chr10-66741994-2	2.85836170695556	0	1.33609814044935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9524552-2	5.67605585675778	-2.28638923887292	1.00470356440984	-2.2756854059893	0.0228648454576416	0.208153551306081	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04268204075796	0.683637474991079
Merged-chr4-43966020-1	2.48512219592532	0	1.36426300604749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67097127-1	2.26810021119652	0	1.38760373478079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-40875752-1	4.62734485928739	1.53500722474276	1.03264884385904	1.48647551766618	0.137153387904941	0.7783937194751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.719438056733391	0.905469781553611
Merged-chr17-10607052-2	4.18111103570102	0	1.73854076430689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36767500-2	3.16614937188034	0	1.34349491478836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182614680-1	1.5267201926518	0	1.4708046434501	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131028114-2	2.11161587084178	0	1.64202640704018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91421856-1	1.46058846032942	0	1.51455650279883	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99315105-1	2.1828121894315	0	1.41530210142158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21331823-2	3.42907907225745	0	1.40103677866704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58366579-1	3.33118797944986	0	1.34395329804088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-92861767-2	3.66133094382646	-2.3897654253435	0.988695595502691	-2.41708917913046	0.0156451835284202	0.154710372779188	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99796245085723	0.851599296279844
Merged-chr19-6360063-2	4.00478862625375	0	1.37888798960726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129985005-1	1.95224394901207	0	1.39095719853849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15464556-2	3.09362397648552	0	1.38203451912458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3474135-1	1.72352352133412	0	1.45183143523888	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15652793-1	2.77448924408256	0	1.35970882352115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39199924-4	8.83094062771456	-0.812315663534739	0.625355927854894	-1.29896532095115	0.193955830697127	0.995945997743269	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63614842059584	2.11736049306998
Merged-chr4-45418541-4	9.61477617425488	-0.288533392955045	0.606771263403931	-0.475522507998153	0.634414594227731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36193572029984	2.62038931457034
Merged-chr5-21091408-4	5.13800689381605	0	1.30248984742272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119863090-4	5.72473767009107	0	1.30582009340315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126496465-2	3.57247119466923	0	1.41125593713602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21266701-2	5.77960037218224	-0.594371977525804	0.77069164373861	-0.771218920504336	0.440577181217891	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94722155781418	2.19540651000097
Merged-chr13-23721003-2	4.21059030622115	0	1.32885945774733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98972565-3	5.3103444364339	0	1.31252389287421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66241926-3	5.02837070442133	0	1.30583964659954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121795106-3	3.78525981171676	0	1.31802703063971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104620878-1	5.35810261932896	0.251907626439986	0.850907607072161	0.296045803735097	0.767195101989502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07276882152473	1.86719832675847
Merged-chr1-64052582-3	4.68156069187029	0	1.32188527426832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50862683-3	11.4294774289674	0.485426058622352	0.437000939805103	1.1108123905611	0.266649111962164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19582130702989	3.67155452884011
Merged-chr4-46126698-4	4.20959607766835	0	1.32041078601178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69663271-3	5.04495889543764	0	1.33240671413441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64315718-6	18.7739908516978	0.760239989496198	0.41850798692041	1.81654834138393	0.0692862995230949	0.471721455369469	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51078381623833	4.22260500678504
Merged-chr15-55563939-2	5.03841583027031	0	1.31131065695141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36532175-2	4.60121001666431	0	1.30430017834648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-93011655-4	12.4870208448102	1.26610215368101	0.558153413439272	2.26837662046971	0.0233062615046818	0.211288979506789	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81899105908578	3.05514754465273
Merged-chr14-30564621-3	7.22158825983187	-0.301028046427852	0.761946923629132	-0.395077448431793	0.692785731469757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91773907542532	1.41959898789419
Merged-chr14-25745941-3	7.94388695363928	0	1.30947283166527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38619242-3	4.29590754129284	0	1.319927603576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144453850-2	4.55322845851131	0	1.29728752550608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24954582-2	3.85733390092928	0	1.31682375799146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136980137-11	37.530103561811	0.760433455148241	0.319670707707464	2.37880242641477	0.0173689826639584	0.167873619458516	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51024608710436	5.31066152822819
Merged-chr9-115733355-2	4.61908632926905	0	1.31305680536421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29379870-3	11.4020182045024	1.01975694365002	0.505186913356519	2.01857355503261	0.0435315619347142	0.336161975802218	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62498191271541	4.70447800446373
Merged-chr14-73411093-3	5.48892002201479	0	1.31554100544691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-31400487-2	4.08533805955008	0	1.37754631074443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79228577-7	15.650140449357	0.678300133236731	0.499685217161947	1.35745487346866	0.174636722757673	0.924323369633269	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51043442065355	3.41319045218001
Merged-chr1-171673035-4	7.64568839982563	-1.61614955255887	0.575451460627939	-2.80848979129414	0.00497744605172285	0.0649084393725567	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81827763131521	1.57664565284388
Merged-chr12-35641153-4	12.9178503292866	-0.313599839055591	0.560107537225867	-0.559892196075072	0.575552972066721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78458160937057	2.53473953900404
Merged-chr11-55158986-4	5.18041928716452	0	1.30382961019075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129675133-6	14.1315161049137	0.935492579267404	0.424801176584832	2.2021892377706	0.0276519439605418	0.240701202883384	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60773205207822	4.45950607795885
Merged-chr4-45941909-3	5.06305184580215	0	1.31472392860453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120189515-5	11.6678165092636	-0.414649831066923	0.581600502357033	-0.712946136371075	0.475879088500176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09064194559012	2.71743683249264
Merged-chr19-21671225-1	1.98428881475156	0	1.3732976755698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73257552-1	1.98332568567096	0	1.37585599205996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6716700-1	2.41096134482644	0	1.41254902653464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111097325-1	6.56526273152159	0.188158645336869	0.552601129003559	0.340496310016872	0.733482801146228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77875547559714	2.76616155187212
Merged-chr7-49213198-2	2.12803161676015	0	1.40865857606667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64378214-1	7.49968781770634	1.66667275237566	0.867781611288719	1.92061312511627	0.0547804992310696	0.39607064646531	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33335071383474	4.35857817179383
Merged-chr4-117190926-1	2.20169246785605	0	1.36639768538618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149118783-1	3.25396169159034	-1.62502939842528	0.9762168192503	-1.66461934109396	0.0959887241694223	0.601042465463307	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38918871081687	0.581381506691384
Merged-chr14-25402629-3	3.65472238130778	0	1.32771730504316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119442363-1	2.16572221874545	0	1.58919133199123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55215335-1	2.17496949046385	0	1.40438470868017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67519346-2	3.79046827773445	0	1.34782544592757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13293499-2	7.82738756438125	-0.299770575880406	0.679387932673409	-0.441236238478362	0.659041980869046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36134212162119	2.08364730863447
Merged-chr19-41997961-1	1.12605036516772	0	1.5717603153748	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30443045-2	3.92163512260537	-1.83949137343828	1.08393097635571	-1.69705582141663	0.0896861074874632	0.570988735373711	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87595602446407	0.683637474991079
Merged-chr16-19998800-1	2.22354168047415	0	1.34664280972094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-60331904-1	1.59948708242801	0	1.46048992905563	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146811264-1	3.71717860908141	0.108925263929544	1.32689572907842	0.0820902965790668	0.93457490928954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr11-113778044-1	1.83419532481625	0	1.39060637992532	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109921451-1	1.8732507255667	0	1.47687523245141	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80948796-3	4.79784773446962	0	1.31531529100872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151001842-1	2.95502363111582	0	1.32887588236672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-62571897-1	1.56651189294102	0.619790066521962	1.37789131251541	0.449810562627399	0.652847040958355	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.683637474991079
Merged-chr16-59499379-1	1.12020622645418	0	1.6045308944078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21562711-2	1.90092572449339	0	1.51469456547671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43376730-1	1.75056813641705	0	1.44541449628603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90033475-1	4.71734808121345	2.02554038621587	0.822926863517126	2.46138566622903	0.0138401502395442	0.141223993996449	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.985098695871224	2.81976602193181
Merged-chr4-105716011-1	1.79734888554524	0	1.48998054098843	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136322215-1	3.03625771258245	1.28912492857679	1.36488347116213	0.944494497745776	0.344917012253965	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr13-94467132-1	2.49310344471494	0	1.42771365928113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5602639-1	2.77422904326121	0	1.35809720985738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46341064-1	2.74419216958851	0	1.33890836971892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35743410-3	8.94043823249817	-0.135406597326118	0.7658268079375	-0.176810991627194	0.85965685501514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54512093495135	1.46928333126936
Merged-chr13-74854544-3	11.2367014318936	0.886638206708587	0.580782193155102	1.52662773955228	0.12685360516323	0.737817150244451	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32240929109282	3.47302661389487
Merged-chr13-24806290-1	2.30579917511093	0	1.35839990039311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69666370-3	4.60378693236366	0	1.32962458071239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112082662-2	7.03424820410795	-0.98447164046717	0.750326278067684	-1.31205805959839	0.189500545544344	0.980097955878205	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74088091117332	2.9868467483527
Merged-chr2-24315629-4	5.77293554785559	0	1.30129459753411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4973528-4	5.43824437713146	0	1.3186513979622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11205167-3	4.13898488504102	0	1.30773918500696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88145956-5	9.78904972010329	-0.889260263218208	0.538162897202175	-1.65239979909677	0.0984530764715978	0.613416736757535	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69092717872418	2.79747371962553
Merged-chr14-103826117-4	4.47534381331689	0	1.31500462958347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144935445-3	8.22815300420692	-0.0404518086476622	0.601282643776669	-0.067275862801533	0.94636209203933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35093449550744	2.2484890300238
Merged-chr16-28517941-6	23.7928066065603	-0.0385225225641104	0.362396416450065	-0.106299402575407	0.915344805581684	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.37703834567711	4.36751422719136
Merged-chr1-152424863-4	5.07888408879019	0	1.32450986251551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180051191-4	5.53782735837602	0	1.30339607365232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47225486-4	10.9024309048998	-0.586830917570555	0.604596756177224	-0.970615392118544	0.331739838214915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95098158319053	2.64967739731707
Merged-chr13-110626575-2	4.17789292921573	0	1.30748315933481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157094135-2	4.58641478829392	0	1.32883760979303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107876164-2	3.3934965681817	0	1.32339891079754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-103940720-2	4.21433432001562	0	1.34305224855881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58521141-3	4.34403427295652	0	1.3407438393323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128615052-6	17.7678315546409	-0.229382171976429	0.489818062442816	-0.468300762190061	0.639569523452361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58076260309438	3.0581710407364
Merged-chr17-15812581-3	9.28643173463293	2.2085936413598	0.692607069625614	3.18881186493468	0.00142858819904549	0.0249851793225939	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4336517695121	3.49972584710748
Merged-chr12-111699462-4	7.29907281360444	0	1.30029423184994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20142112-4	12.8774798306179	1.3232935534087	0.55653836202816	2.37772208295992	0.0174199496189338	0.168291547575229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47658743142924	4.14669124014738
Merged-chr6-116725495-3	6.34043019201878	0	1.30069396027089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126789179-3	6.8615783022371	-0.0129026258203432	0.618541122378021	-0.0208597704397376	0.983357518173576	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64660900567101	2.22392366263603
Merged-chr14-74944838-1	3.01223122450955	0	1.38075648511887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140268489-2	3.75210576634861	0	1.34720798269618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31138646-3	4.74277784859369	0	1.30925965335555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83823954-2	4.88510076647393	0	1.30731838797742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81171472-4	5.68867284149028	0	1.31876907000147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97657361-3	3.30380420451631	0	1.32453446898912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79534401-3	3.34226402834391	0	1.32496508874061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113378517-3	6.98075448365106	0	1.29189836137155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164067279-3	4.35036803715324	0	1.34254779718345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58521572-1	3.37003484098207	0	1.35413171701993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89934345-2	4.18043061193558	-3.07819041693134	1.05714590651639	-2.91179334655411	0.00359360297811581	0.0505984874397664	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7431821696809	0.469435083901436
Merged-chr17-43334323-4	9.83781436580897	1.91062635308095	0.834945368136021	2.28832499226428	0.0221186021278425	0.202800922498386	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.899323202389902	1.96334085054552
Merged-chr1-151706233-2	4.9267403712562	0	1.30712795541352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95680514-4	8.01175644452756	0	1.29520203438797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32830780-3	14.4530097907442	-0.0644099031943747	0.623567990471879	-0.103292510485718	0.917730819591918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46208228312944	3.2530294791555
Merged-chr18-37908279-3	5.45607354648361	0	1.31287615630067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13984384-2	5.1563415920067	1.1736642370276	0.872248741069459	1.34556139982337	0.178444007290058	0.938328003570943	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.828298655478171	1.37490486545505
Merged-chr6-30205787-4	5.9140391120752	0	1.30001294413843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50910569-1	1.99943407517772	0	1.38324972651077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47127739-1	4.58018140157084	0.603364281816889	0.904407998217568	0.667137268805689	0.50468445643526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2466233237127	1.11779166918352
Merged-chr1-152720798-2	3.17308223169926	0	1.33107744989652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-112451762-1	2.56527252440966	0	1.36406069218263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49194717-1	2.83089800140398	0	1.34930647732997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77462026-1	1.46268761217603	0	1.50418142205408	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107856243-2	4.03700145818731	-1.61306061101959	1.24264635006249	-1.29808501907118	0.194258121583893	0.996892258441066	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760552225909557	0
Merged-chr6-115911920-2	2.02238800072003	0	1.46593809614095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11026038-1	1.94045458563957	0	1.43314716987089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170160723-3	3.3860484632159	0	1.32969094974469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82751692-2	3.77526617617972	-1.16733790470271	1.0987652653069	-1.06240881611474	0.288050133223801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59421443086736	2.03247245696714
Merged-chr7-97172357-2	5.01010320921019	0.244649413740061	1.32244736713929	0.184997467437426	0.853231021981379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	0.382164212378408
Merged-chr7-122127919-2	5.42454753891499	0	1.33759724988674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53123628-2	2.91548881927076	0	1.39019389224232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77801382-4	5.86248401324236	0	1.30866716111385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66114117-2	5.67168406056394	1.8322575293058	0.794464672558293	2.3062794263786	0.0210950239653549	0.195223826092633	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.866220529060937	1.78612360069773
Merged-chr16-43106431-2	3.26267003299485	0	1.3822523443269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107696250-7	19.0265125035403	-0.514983957248394	0.429338851852722	-1.19948137706636	0.23034082180661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56987716160611	4.12172425098412
Merged-chr4-151068923-3	4.39328825089533	0	1.31375995240678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67212878-3	7.86006233218414	-0.311523191218933	0.652548569505201	-0.477394642754558	0.633081128306848	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44567412509302	2.61076849167644
Merged-chr8-104219995-3	5.5989612604061	0	1.3384180576863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44656763-1	4.15045296472961	0.097827797928199	1.31393297767937	0.0744541765752617	0.940649001710921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	0.563523181795778
Merged-chr14-31685834-3	5.93242251380626	0	1.30281236672473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33986593-2	4.6390498031457	0	1.34208078018539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3387482-2	4.26246012516117	0	1.31912831029851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8948421-2	5.69124120210431	-0.294978873698536	1.04554228525789	-0.282130027506038	0.777843809439088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15907657994676	0.581381506691384
Merged-chr2-66101179-2	4.03130689082521	0	1.34879415320533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56865736-1	3.2754090855376	0	1.32586667855623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92998712-4	11.3249895913131	-0.0697918514285756	0.470899953477767	-0.148209510137212	0.882177426704178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29825944593693	3.33108913876853
Merged-chr11-43384603-3	5.53206862431123	0	1.31564445047443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94418189-3	4.33331098344642	0	1.3342249523202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61056967-4	5.20278359687377	0	1.31394450988347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32396014-4	10.4859066304097	0.461845395523519	0.570625143074204	0.809367412440606	0.418303840859647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05439532453339	3.67600721765121
Merged-chr5-105648947-5	22.2547081009372	0.473372788858988	0.3644826302329	1.29875266910939	0.194028822532221	0.996150804304723	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67972207590365	5.13056890029452
Merged-chr3-22034756-2	3.69348806367056	0	1.32356336668671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95617046-4	6.39438590893201	0	1.30521257164711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72534264-3	4.46747573623592	0	1.30410046674857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54544961-3	5.31416282495462	0	1.33462710645935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106668411-7	15.9472874212466	0.487915398081715	0.402975191090715	1.21078272029873	0.225978689425915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89979154609813	4.417917107713
Merged-chr15-81568827-3	4.91077310926837	0	1.29743285509393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26022843-1	1.75318003953097	0	1.50196872685687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134144889-7	14.2743829960444	-0.284747205747775	0.483998969249324	-0.588321925952475	0.556316231226545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23111871625649	3.39476780404895
Merged-chr2-145885393-4	11.8315971384811	0.168459660046051	0.560822795240358	0.300379480783858	0.763887713410688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51479972519686	3.97241508637328
Merged-chr7-38085616-2	9.79899331176138	2.09433080586094	0.626232707032343	3.34433315657653	0.000824806238582086	0.0163277153790927	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61706113751212	3.78350304080024
Merged-chr9-7914698-2	4.33088781945945	0	1.31020020860481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45699521-1	3.06800133497226	0	1.36564082630102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70674701-3	5.32924764126981	0	1.30302941308149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63119066-3	4.72995321831298	0	1.31796750563169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127278512-4	5.29438425047992	0	1.29570211830453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77887100-1	6.87153914435083	-1.2665145513814	0.996422345332261	-1.27106197217916	0.203706602557617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16037546453949	1.03956264035389
Merged-chr7-58837033-3	7.39197793407695	-0.876183448449212	0.625943158471547	-1.39978117276449	0.161578857400468	0.873833651882065	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79358149056312	2.50670197153503
Merged-chr9-85368544-3	4.43017880215915	0	1.32729767265648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64398888-3	4.68688305525183	0	1.31034555300549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53090563-3	5.2300856386705	0	1.30980896772573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33079667-3	5.56407504964029	2.44540212042335	1.1892496068818	2.05625640426754	0.0397578080696603	0.315138019036724	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.869764003783424
Merged-chr16-35922521-4	5.43372975625568	0	1.29583381105869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66343429-8	20.7735019799729	-1.56598623919572	0.432302808475311	-3.62242902080326	0.000291849557051439	0.00731019494808726	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.45051396409358	3.65517921459824
Merged-chr3-104541497-3	5.03852265167074	0	1.32145921530446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88656190-4	6.22369500511497	0	1.3056605702887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36914315-3	11.5453404113466	-0.685200190776726	0.5589693530947	-1.22582783292708	0.220263470880139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52169052226511	3.29299838501832
Merged-chr8-72486002-4	13.4240911085002	1.34043481042761	0.609647071560653	2.19870622357981	0.0278988181435491	0.242333666144937	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81059208748127	2.57137791780664
Merged-chr9-62510766-3	5.36916868930759	0	1.33057650095827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121251394-4	6.31147904138806	0	1.30834061316888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71047480-1	2.09819609949955	0	1.42522429205262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115170687-1	1.20611371884741	0	1.56784089834613	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51460231-1	2.58506835299816	0	1.38665062323067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155018662-1	2.83988357979634	0	1.3890878926913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10724242-1	1.56777796431541	0	1.40156806198133	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102242555-1	4.6588592345401	0.602748649594684	0.825563259188909	0.730105952373494	0.465325423207446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83466121464591	2.00129118555875
Merged-chr6-119859187-2	5.71133536171348	2.27385677274641	0.907284080451452	2.50622359825268	0.0122028423911393	0.129072019891775	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30251751894576	2.91526369906289
Merged-chr16-43841486-1	3.03869982237507	0	1.3605218322805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33595549-1	3.74025527576056	-1.6024457295502	0.933312392967057	-1.71694466035742	0.0859892837700038	0.553492487907276	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05728149081873	1.69686753743604
Merged-chr19-56400432-4	5.92216051029163	0	1.31297123834166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142902890-1	1.87080886257699	0	1.48492099484167	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80250024-1	3.08014301405587	0.311955359888112	0.805672530495922	0.387198704287575	0.698609109307228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20165243527111	2.83977088234384
Merged-chr6-89430962-1	3.3798887396733	0	1.32390176735214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61329264-1	1.37885132938848	0	1.86247004516708	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65787582-1	2.6750621568709	0.56938750963734	1.21687909862501	0.467908036452191	0.639850356197258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.775974565785538	0.918668513615376
Merged-chr2-128764231-3	9.0914469954038	-0.382770364289118	0.680382085916607	-0.562581485039325	0.573719902577125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67446502151646	2.64506176629191
Merged-chrX-167104465-2	1.94619711757662	0	1.51593548318462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142698187-3	5.17831455240689	0	1.33183520461157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157232603-4	8.32179791444073	-1.42127820546001	0.827971951541442	-1.71657772079598	0.0860563560817583	0.553815111731197	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91311909020695	2.16448544747254
Merged-chr2-80132920-1	3.34316365555394	-2.4227224702028	1.2953554734316	-1.87031476679109	0.0614401201201243	0.431474055816189	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23484466045373	0
Merged-chr6-125471570-1	1.52828140989295	0	1.44142066248244	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33227198-4	4.54951572809006	0	1.30534158619044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37924186-1	5.20686903932108	2.47599875733955	0.94883527792245	2.60951380598004	0.00906709872699446	0.102864346078851	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.761571207890147	2.19193974227778
Merged-chr14-76287334-2	3.22352326922188	0	1.35163874939629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140722918-1	2.14335535515198	0	1.42221385423612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3629029-2	4.23359645267206	0	1.33614479328096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78769176-1	2.74568465141278	-0.987705491870547	1.14742153600726	-0.860804386945286	0.389345788444861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18901359678179	1.84022605426951
Merged-chr3-99981221-1	2.50204506915373	0	1.42277103314755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128630244-1	7.39502672817073	2.2550849007772	0.58029345428136	3.88611121517804	0.000101862853981672	0.00321867898473283	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54845543208734	4.13997687761156
Merged-chr11-54998917-1	2.63585537824265	0	1.34243521911043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-30624084-2	4.85224400149838	-1.52822390857756	0.932520692664563	-1.63880964851391	0.101252909117905	0.626797328459514	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04516398836353	1.26637849737819
Merged-chr15-8625574-4	4.78038503254865	0	1.30294150818906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-70650207-3	7.57430679941391	0	1.32356780339885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63906682-3	7.43221348767077	1.79730987730609	1.0022209948069	1.79332690755733	0.0729206673519695	0.490637760377039	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.31470332505763
Merged-chr10-80955843-4	5.36145412873852	0	1.31470983613047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92127466-2	6.33067433726715	1.73881095898422	0.769477842609236	2.25972843231984	0.0238381105498077	0.214799389408127	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17028052331538	2.54352955995151
Merged-chr2-52784133-2	3.3764615257487	0	1.39311264867213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24609037-2	5.37589713585992	0	1.32547881348197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12220585-2	6.53976537507763	0.830589917283639	0.823422129385813	1.00870487644432	0.313116192412735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93854902463299	2.17543988140679
Merged-chr19-47932478-3	3.5737881374929	0	1.34259696359079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56569174-3	5.82071330389403	0	1.31172152087756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149049745-2	9.08382421506341	-0.19237608830835	0.545234646158052	-0.352831738892441	0.724214587905098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15502845503894	3.07098251396438
Merged-chr6-47317390-2	4.20441720966102	0	1.32497519102466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55017778-3	6.31261823986303	0	1.30965786604175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28081247-2	4.64899338940717	0	1.30575945874999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19162580-4	5.61977703901282	0	1.30148702256387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24727686-4	4.52967258769966	0	1.3226122739827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30003343-3	4.43521833029371	0	1.30667036136248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176996910-4	7.1599573318074	0	1.30356291039897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46376538-4	4.54887038548166	0	1.31628333731897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80416828-5	14.1637771812622	0.832733468028574	0.536783724772407	1.55133889050315	0.120820491500555	0.713737582769757	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92812628220408	3.66906077036531
Merged-chr8-14988971-6	24.8417975244354	0.449828090419512	0.329764283368641	1.36408978505611	0.172539309326633	0.916646642866515	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26301525334221	5.57360362518469
Merged-chr18-4312121-3	5.06141238390177	0	1.30661548803776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13639703-3	4.96971152826041	-1.82641986727459	0.893603458809622	-2.04388182394412	0.0409652231660576	0.321667083995337	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81947052549377	1.20539659680455
Merged-chr2-84557379-3	9.09053524343168	-1.23640698899958	0.671521043903776	-1.8412036379559	0.065591722444632	0.452938465060438	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11404187816831	1.76302217368042
Merged-chr3-145963751-1	2.42254623436712	0	1.35106614300924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144973475-3	5.17739846165508	0	1.31395671312811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100439555-3	6.4353738330228	-1.19158259037117	0.69548021732372	-1.71332348597419	0.0866530439644034	0.556466804052866	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44265376672321	1.90896656829731
Merged-chr5-77358524-2	3.38664391329409	0	1.33669642771762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109433157-2	4.38922912186251	-2.32199555963679	1.00992422484984	-2.29917800019308	0.0214948337272337	0.198166112406859	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51901928741232	0.609949614787909
Merged-chr2-167798136-2	4.44084169226848	0	1.32015860394885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85489884-4	11.8231462400863	0.543681019108052	0.613452589242612	0.886264119904193	0.375475218764794	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94487021436375	2.49772695277398
Merged-chr13-76844821-5	11.9606958679371	1.75563715974675	0.499675775197098	3.51355268134469	0.000442156725161061	0.0100323518619357	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91249628002414	4.64549478249635
Merged-chr4-137578385-6	15.5369460738232	-0.481750216739697	0.440528264706817	-1.09357390963396	0.274141897169816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39716628400949	3.59854051378723
Merged-chr15-81046314-3	5.04834670996027	0	1.32982716814364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58210187-2	5.95898495476379	-2.2085933337292	1.35561755979603	-1.62921564254561	0.103267376662022	0.636687893439036	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99375868547815	0.825079211029734
Merged-chr7-96409054-9	27.4313242228851	0.646415394073023	0.410014923989107	1.57656552542999	0.11489553047182	0.687353596467233	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.27712142155679	5.9360430990882
Merged-chr11-76475556-1	6.106129494732	1.30982890841822	0.863109671120929	1.51756949579436	0.129122961646547	0.746649714319547	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9051200092405	3.49353333163368
Merged-chr4-13099055-1	4.34661541135607	-1.78734835111216	1.03077667625747	-1.73398214402915	0.0829212514331809	0.53913470755314	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30651423027218	0.733321818366247
Merged-chr1-165717255-1	2.88673221240506	0	1.35558497947114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98031460-2	3.4005261028863	0	1.32671869344066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12760950-2	3.94597092446579	0	1.33739792966585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50117582-2	2.86438767878606	3.04115441418135	1.28474037612623	2.36713539225029	0.0179263735372123	0.172115310779118	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15307255889252
Merged-chr4-148165103-2	3.8732575865593	0	1.32530836066157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99365137-1	2.34008129076575	0	1.42160700439238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83855380-2	2.68712742721532	0	1.3453421817804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124620043-2	3.95512980330717	0	1.33526152635487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12836677-1	3.14922484103329	0	1.35340454571615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72019068-1	2.08081486835855	0	1.43363993467897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84587703-2	5.52767939111474	0	1.31590879376438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38956100-1	3.38058521331393	0	1.33592323738373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5131864-1	2.10031058754833	0	1.46304629676739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28882541-2	2.81749271337952	0	1.33367514520762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93013143-4	8.37228765935298	-0.060123789193067	0.6445333585717	-0.0932826647270866	0.925679003571727	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1817243206001	3.18171748210167
Merged-chr11-40763588-3	4.3548451453016	0	1.3085736211921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43075929-4	11.7616784124714	0.475290077595644	0.416580936939166	1.14093093430497	0.253898665174742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38271834426919	3.58084911434972
Merged-chr8-122269577-2	5.03070191066437	0	1.31452162597023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96883617-2	3.72941563847046	0	1.3357928943996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31898496-1	2.81432127294602	0	1.31658055143889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96431919-4	5.75136044063615	0	1.30336453202911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142912929-4	5.60289938102405	0	1.31065296301347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156455693-2	4.4443596512393	-2.29859454233812	0.908084017325515	-2.53125756921472	0.0113654354511461	0.122252797529316	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5066270966151	1.26501898168246
Merged-chr16-23376363-3	4.43257449968891	0	1.30740081125932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163320694-1	1.97462488469915	0	2.3802521675847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158316580-1	2.63379786301741	-3.75687329015993	1.18578005107338	-3.16827162571943	0.00153348174427961	0.0263997109711353	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21451294890086	0.382164212378408
Merged-chr10-87853543-2	4.7542880791819	3.2049877671475	1.0434500354372	3.07152969313441	0.00212964981259708	0.0340171343568733	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	2.41564793337539
Merged-chr12-102356018-2	8.08756695084049	-2.55835635206482	0.692885993010508	-3.69231933950499	0.000222218189893648	0.00592696728032258	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12679301466538	1.64538595732494
Merged-chr9-64740845-4	8.26020080252349	0	1.29979198972789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92772543-3	10.6801732039394	-0.373325972120287	0.495400194016802	-0.753584630424318	0.451098676082641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34376662144803	3.79332946950708
Merged-chr6-5050040-3	4.96880551879838	0	1.32608948700188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58548241-4	13.2561513514026	-0.920969874225934	0.571415641537038	-1.61173374909486	0.107019890293055	0.653581472064484	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31420159678394	2.84561691906514
Merged-chr18-75462772-3	4.70320539766276	0	1.32147123778175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61895081-1	2.45204564350371	0	1.36145350915572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39955703-2	7.27024850930889	3.13386886059128	0.734581970594864	4.26619354413705	1.98836302056848e-05	0.000875243100249431	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40079259691464	4.66806820620963
Merged-chr2-127322612-4	12.801069243598	0	1.29283611119694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115573298-2	5.39601877392634	-0.756602418002762	0.6843494944249	-1.1055789829122	0.268908790790019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53414133499585	2.4360226934973
Merged-chr2-166553659-4	4.9477748570019	0	1.30045695954642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35433650-2	4.31360511696762	0	1.32452998533266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13798959-3	5.43202172817798	0	1.31574395672845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84627372-5	21.2297188983946	-2.96411603485568	0.857537043496833	-3.45654576363105	0.000547146293377899	0.0117766211090488	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6116760385376	0.733321818366247
Merged-chr13-75796288-7	11.794520676475	0.61257416360388	0.489374857207229	1.25174833684698	0.210661580773483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36633265273887	3.35809947377024
Merged-chr4-119082833-6	13.7532296440808	-3.46861680232259	0.845610503314679	-4.10190837120173	4.09756546385872e-05	0.00156398555276971	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01294132164864	0.581381506691384
Merged-chr2-132217274-4	5.01234429121589	0	1.32019658325134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73462996-3	6.73325351510905	0	1.31872532957596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71378197-4	6.91154332161709	0	1.31952927577974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84657498-4	4.73309382766326	0	1.31051868200753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36319729-1	1.65047912504354	0	1.46052341157172	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41619734-1	3.0351804523122	0	1.35427060903391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79600492-2	2.673239533044	0	1.47760800963463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-56013384-1	1.58956959855346	0	1.56235667937781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27407144-1	2.93698165316461	0	1.33672856908137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48426436-1	3.72723949652662	0.447678582258215	0.858784693778262	0.521293154735481	0.60216256882927	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43735881377531	2.47304157811658
Merged-chr1-128106466-1	2.36417468811622	0	1.41529300853307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16167627-2	5.10050908748112	2.51308848215927	0.878315668326327	2.8612588534918	0.00421962374146032	0.057121840964383	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784769569710081	1.75033869392915
Merged-chrX-71270900-4	4.74255083795901	0	1.31703229484394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21387552-3	4.1094182820388	0	1.32499918908137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62744278-1	3.27988528048094	0	1.3176433480253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-93307626-2	4.25701978783894	-3.74368691874822	1.15906630871282	-3.22991608901627	0.00123826554509244	0.0224019103847206	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20312796608011	0
Merged-chr13-85629678-1	3.30979163472662	-0.896260706635851	0.897456025084668	-0.998668103600168	0.317955496979978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38017739424526	0.845523456341755
Merged-chr5-113919521-1	3.97756960761225	-0.165648757836263	0.809901807765069	-0.204529433380785	0.837939793586991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84772960437236	2.67300841487975
Merged-chr15-76473793-2	3.71861710863208	-0.884418333013338	1.26359812078308	-0.699920582712838	0.4839769025453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	0
Merged-chr17-67114927-1	1.00342480572622	0	1.76606523966441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34905570-1	2.15220283831466	0	1.41467569421168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111054059-1	1.52893314556101	0	1.45453390610373	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-103803731-1	2.57447424737062	-0.704801770717959	1.54039089749655	-0.45754734844474	0.647277677864748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13581414496892	0.581381506691384
Merged-chr3-97666358-1	2.82275738878996	0	1.42414945167556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120123309-1	3.75504587586574	0.89604910278122	1.23739677718503	0.724140485333778	0.468979491728064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80283665149723	2.20180876945005
Merged-chr13-113337467-2	5.1550449298241	0	1.30680661393636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46227477-1	1.46324851734426	0	1.54521039846965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51792741-1	3.85866635550401	0	1.32559455790224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17899902-1	4.83624529442346	0.0903892741298975	0.618508553512216	0.146140701881356	0.883810315864244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80158535259983	2.80193137221517
Merged-chr14-54807404-1	2.21815936221542	2.37697050554474	1.51092386422829	1.57319012679623	0.11567480077767	0.69094017656468	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.15637648126681
Merged-chr2-19505921-1	1.5143693516725	0	1.56919551842577	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-151745578-1	2.76728582963708	-1.64644971373626	1.16077167771856	-1.41840961951473	0.156071208765987	0.852922727785416	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91762027659128	1.20539659680455
Merged-chr17-84318642-1	3.13065396711639	0	1.3537062755355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25827376-2	4.9892874513142	0	1.31332847825133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46908371-2	4.11812980574462	0	1.32570444183227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-24596441-4	4.46335212903737	0	1.31958841887263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37050078-2	4.01372957200715	0	1.31174839166653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101974357-2	4.09520948975075	0	1.33501962274895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47842901-3	6.87973673073613	-0.82852812795238	0.661771532423981	-1.25198514496021	0.210575276972189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12547589696071	2.84793875274919
Merged-chr4-138062347-3	9.41633208586771	-1.29207593405524	0.560652399894747	-2.30459360255624	0.0211893446048116	0.195764019870779	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17357752054721	2.48727730032444
Merged-chr8-14561373-1	5.6910133483134	0.100805938320786	0.813969156177304	0.123844911758337	0.901438071072433	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72822726765591	2.1359713465465
Merged-chr13-60508424-2	8.81994433617065	-0.220469365165639	0.635611485516566	-0.346861833351645	0.728695121127513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36482566605057	2.24287124256397
Merged-chr7-16932167-2	3.62385274181339	0	1.33056453717099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74964441-1	2.44046765216245	0	1.33872798357953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47356620-5	22.2970389691968	1.17225932871924	0.448740682232675	2.61233129763665	0.00899270626866038	0.102286750884575	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51795680083657	5.69014871235417
Merged-chr9-40638501-5	18.5924377209854	0.29852764305036	0.454271234890549	0.657157266676342	0.511079799750025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00249545313506	3.2009771897579
Merged-chr18-4343448-5	11.1420013343719	0	1.28847349564894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120830525-3	5.72008003500266	0	1.32002699741749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43399494-3	14.9799049186528	1.33901847976951	0.565861836469837	2.36633466593729	0.0179651964507863	0.172448932744903	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46220921401193	3.90803963492279
Merged-chrX-94152866-3	5.70667943020768	-1.64409745096961	0.908594230613291	-1.80949580745176	0.0703740109070738	0.477556245922774	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63553638812966	1.41959898789419
Merged-chr9-74825279-1	2.24767296067158	0	1.37335274052776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16123321-2	3.27783625569652	0	1.35278407358427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84032788-2	2.8556591679444	0	1.3636617328193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166185614-3	10.6999917658961	1.05641689938341	0.410239373850181	2.57512312742856	0.010020440833957	0.111151880281065	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22019378485459	4.16012553731332
Merged-chr13-119838124-2	4.42390442238719	0	1.3405125295626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85351242-2	3.2437174679359	0	1.36520953020353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98947425-3	5.6367410269069	-1.82665270198975	0.695232936970451	-2.62739666787016	0.00860409696379307	0.0986911216773779	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79008424908041	2.18646137299356
Merged-chr7-142278440-1	5.29454022696113	-1.60100824448012	0.621943171626603	-2.57420342809282	0.0100471180576584	0.111391071699312	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68565366597023	2.28109213962751
Merged-chr13-46975131-2	4.12277869956565	0	1.31757283306994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23272250-2	4.44001484193852	3.65800553472995	1.10955200430982	3.29683108184312	0.000977822909594342	0.0187325757403553	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.62815048690431
Merged-chr15-82417732-3	3.8006032704803	0	1.32997802339276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8199300-5	14.574010773326	2.19860622364618	0.626338206077761	3.51025404855028	0.00044767874949467	0.0101189953526388	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59241672867763	3.8963576733768
Merged-chr7-99263684-2	3.73004936193654	0	1.35417496663573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29044422-3	8.71418395260859	1.01412618213215	0.632681119889835	1.60290255272472	0.108956170025898	0.662070447347595	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10907506190078	3.83609659800677
Merged-chr17-12031491-2	4.1161159083047	0	1.36172389812018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31787588-2	2.95321531460493	1.95462233070341	1.34384513105108	1.45449969311167	0.145807818497604	0.812134138045044	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr11-107316099-1	2.52075794761291	0	1.35010518033166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127129794-4	6.76462226209162	0	1.3185856888575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8323382-1	3.21780089598148	0	1.32365840852775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171238658-2	3.5345040168053	0	1.3528782794157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106760378-2	5.41788673116217	0	1.33898623284061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63038217-2	2.63712615193837	0	1.38013509760118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191180009-1	4.84766005983941	0	1.32264470026321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70885796-3	9.65466755387135	0.242408367662197	0.511116240670548	0.474272481234746	0.635305612578115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65099431392623	3.96376400089799
Merged-chr1-87149530-3	4.73043582097467	0	1.3360021327758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25059507-2	2.72857864138979	0	1.38361818245141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81137567-2	4.55824786020375	0	1.33214227807841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129615979-2	5.09085683944136	2.4116325613844	0.89511239641573	2.69422317358269	0.0070552906568052	0.0845625501209818	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.598347757345043	2.66397071612377
Merged-chr13-105139962-1	2.01295685419982	0	1.38433412591941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143510631-1	2.65104534886847	0	1.36512277685948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119895178-4	11.0497926813071	-0.724286515068363	0.49301932236936	-1.46908342575211	0.14181016267538	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12487096583081	3.37214678959593
Merged-chr6-122724849-3	5.72937408747818	0	1.32913339040185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83899755-3	4.18669557332987	0	1.31683875078634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63078192-4	4.75736503859853	0	1.35401834583911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136636776-2	5.25419397223551	0	1.3020219644124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132969502-2	3.92979123145587	0	1.33619086604733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40236786-2	3.71476484599796	0	1.32246213233259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53872095-2	3.87371105735319	0	1.31631382138285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150220806-4	5.35187269221823	-1.25455415700487	1.20189502893284	-1.04381341698266	0.29657172283917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.709714069046076	0
Merged-chr9-96350198-4	9.56397604900538	0.045534002730825	0.57808526896524	0.0787669314119175	0.937218007208368	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80334231680642	2.80415269990625
Merged-chr1-55809389-3	11.911392470873	-0.933246779634386	0.589668473912503	-1.58266351504636	0.113498178365014	0.681677570169137	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25601653376585	2.35287325867535
Merged-chr6-140815916-3	4.11092276174232	0	1.31147827893542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28623152-4	4.43165202085824	0	1.30334918679856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24380074-3	9.06758125866394	-1.23119453187338	0.714233047967498	-1.72379944526091	0.0847440548076596	0.547296606969631	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45022204055291	1.73830414206781
Merged-chr4-19681639-4	8.58245997529323	0	1.30820066304183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79680695-2	4.69307180030226	0	1.30074295888945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60612331-3	4.39890122425251	0	1.31941980225186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97075192-3	4.65835499455894	0	1.29971083439825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145793436-3	5.75987837382563	0	1.34492903416593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130139556-3	5.68818997146189	0	1.30760734553194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15831974-3	4.68011324869302	0	1.32312830353276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67246071-5	9.15636044639768	-0.588244165510997	0.621317925990746	-0.94676837880219	0.343756818170896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95092788160244	2.09282686802642
Merged-chr17-88190954-4	9.67598034274903	0.676971139379761	0.869064256130756	0.77896557660048	0.435999992781982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.782553573787337	1.41695929335733
Merged-chr2-122408694-5	13.1816572504955	0.69268298292329	0.501879334738984	1.38017833167715	0.167531743873751	0.896089820346577	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26352153891105	3.80244064000398
Merged-chr1-60940181-2	6.53072968167798	-0.982623277521586	0.601308153277672	-1.63414261417445	0.102228908750423	0.631941185432326	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89751673861588	2.5281157213591
Merged-chr1-95449414-2	4.22062674848121	0	1.31060227151326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44778037-2	4.19574502830385	0	1.30730207309423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-30930378-3	4.704393110834	2.49536536105392	1.24287076284427	2.00774323095618	0.0446705841564746	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-94537273-4	5.45085679289994	0	1.30704859748913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56425700-4	5.64095747488286	0	1.31121212630062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102755106-4	6.77209992119524	0	1.33435609844518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17280136-2	6.52621468661119	-3.96857111654355	1.02948542397417	-3.85490753353603	0.00011577337846827	0.00355414162775903	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.811416043687	0
Merged-chr17-42855418-2	6.4962858392006	-2.00190696017195	0.7082569073316	-2.82652656041754	0.00470558415174736	0.0621466801488419	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97926408099809	1.92713101668536
Merged-chrX-85919180-4	6.94828744507396	0	1.29777889146446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8650638-1	1.79547297185255	0	1.46009899106299	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123344611-2	2.68776434466859	0	1.4242270418685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166183286-1	2.23082597800826	0	1.46781151459604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133471090-1	4.96556166467511	2.22560049160392	1.46005738544199	1.52432398465638	0.127427798562476	0.739988601951157	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3355255218023	2.69204862343741
Merged-chr4-40774887-1	2.93779099877982	0	1.33763616922684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89112367-1	0.968487471511266	0	1.89750535336775	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145758794-1	5.31553219256377	0.336357076012315	0.903623386964156	0.372231485887447	0.709720505347684	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42531987009748	1.9001726754443
Merged-chr13-68787220-1	5.75322053983066	2.99861545952036	0.873774027414364	3.43179742752681	0.000599595246613001	0.0126513241799074	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20700841817942	4.24406464734385
Merged-chr13-37452611-1	2.24451562758834	0	1.4126809628279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44988602-1	1.80534509722041	0	1.47846891649931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-56541228-1	1.85728774602665	0	1.40270822463135	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81209127-1	3.19684254205523	0	1.34197813562467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28894530-4	4.03602888090496	0	1.32614607025495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99957683-1	2.31064542906582	0	1.39860201006089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33075148-1	1.4415170011708	0	1.53164393604788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-36158391-1	3.06055187994344	0	1.36074318795967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96255476-1	2.48902499062149	0	1.38386024195689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26587358-2	4.99564015672841	0.107676035655778	0.819319945745869	0.13142123075956	0.895442094602141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71874121249315	1.88639437725876
Merged-chr2-125280832-3	4.81973989029671	-1.58273994055002	0.796142208297449	-1.9880115939773	0.0468104077298866	0.353586048262302	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88598331388068	1.4217268527323
Merged-chr6-46454522-2	5.66569443243024	-1.75954220976832	0.782438926849559	-2.24879175791139	0.0245257480063475	0.219460386974322	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38469990278079	1.28311275482176
Merged-chr7-16190529-2	8.00792951711009	-0.484269324648693	1.0239358003878	-0.47294891385308	0.636249626559114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08655280051393	0.994591904006138
Merged-chr6-133138215-1	2.99756015406902	1.55410275272915	1.32358726299082	1.17415964642742	0.240331086052459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11804913098444	2.20385331986326
Merged-chr3-96284662-1	3.39670972279888	0	1.38046925132916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19807561-1	2.08317648247207	0	1.38759691229561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142054292-1	1.91485045155842	0	1.45391847352977	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65601016-1	1.32036025963198	0	1.69895844792412	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58614123-1	1.64068670540954	0	1.49931882753792	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100021784-1	1.91261074942897	0	1.39888824338035	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69054076-2	1.81109839916811	0	1.51248036554126	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24154655-1	3.14639018804759	-0.588055491111764	0.808815430523182	-0.727057705527923	0.467190606531974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71949493276102	2.12695852494485
Merged-chr9-120586760-3	5.05913940020439	0	1.31260407049734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15685383-3	4.26092383381845	0	1.31796375761605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11824618-4	11.7689457687822	-0.260904889695756	0.442196842081472	-0.590019794052908	0.555177379128808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35765303557306	4.19100321806316
Merged-chr5-110636099-3	6.51389971130542	0.89430047904016	1.14814989325016	0.778905684961216	0.436035274862676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.581381506691384
Merged-chr1-186722096-3	5.53333381927129	0	1.30953244330244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129033620-4	4.91898410561412	0	1.31096275270431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30204552-4	5.46542848595034	0	1.32681881501604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20497713-2	4.8702789340701	0	1.35472926485508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-75445935-4	4.96112100730575	0	1.30864057840208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14187092-3	4.15065999118372	0	1.31389527838242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31754810-2	4.43781782633317	0	1.35197782229475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129790126-2	9.84099536676279	-0.997831290577286	0.564343068849123	-1.76812890182595	0.0770393567203193	0.511181373781493	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07131087150805	2.55449967496659
Merged-chr12-102567109-6	18.5023572974358	-0.711647970053006	0.456286311487058	-1.55965224495495	0.118842083074019	0.705738674961877	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.92542960993858	3.46432071445819
Merged-chr7-133154128-2	3.23831056183539	0	1.34139807380955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35076744-4	5.8288952581056	0	1.30397139671428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43672607-3	5.59442987962399	0	1.30641249834054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191403302-8	14.6646320078102	0.75260499515691	0.367426269168424	2.04831569843996	0.0405290757606148	0.319085901765438	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87276703855346	4.62684259973326
Merged-chr19-34519420-3	4.75846605829894	0	1.33992201048337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125141665-3	8.48827061929391	-0.425550594533257	0.641034292317651	-0.663849968142397	0.506786340842859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57926061622976	2.481957134649
Merged-chr13-51881985-1	2.8397887317099	0	1.33991206926626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37062489-5	11.9523285929886	0.92254422361986	0.67803530343377	1.36061384849406	0.173635752869342	0.920751771786404	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84986276280127	2.56773781410272
Merged-chr14-95154846-3	7.63908630942541	0.90557491456327	0.768408294440428	1.17850746942123	0.238594356306465	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46671692828032	2.32253008702474
Merged-chr3-9914741-1	4.37901008517944	3.2331786160073	1.04419984619844	3.09632167422563	0.00195937676454923	0.0319374991409912	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.80725200154661
Merged-chr7-72162482-1	2.17051888078837	0	1.58000757019844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88539043-2	5.08254155381969	0	1.35243840453414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110363879-5	12.3349637232391	0.889195049714712	0.485932364291099	1.82987410400604	0.0672687665538177	0.461689404393002	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27987521482507	3.79694067428239
Merged-chr12-110855574-3	3.59579662568284	0	1.31552904457418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45102315-1	1.72071964730169	0	1.45980056619499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123187177-3	4.16488739507766	0	1.33644389351089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14587436-2	4.21531423070979	0	1.34454118933971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35536242-2	3.60232947195302	0	1.32716343532211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45663447-2	5.34216556856179	0	1.31380931486459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115717975-2	4.69209381165999	0	1.30452360623083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34175073-2	7.55578742749306	-0.214005066707192	0.805039604657581	-0.265831724885409	0.790368809083058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04002441875248	2.03670253366966
Merged-chr2-90501901-2	2.69254517046969	0	1.36499038205288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70994788-5	12.4097995726618	1.887358373723	0.63575668716471	2.9686803329432	0.00299081552922968	0.0442968793229924	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48502376188194	4.91222743482579
Merged-chr11-103382892-2	5.1325628490794	-4.63123438880008	1.11307213382717	-4.16076752624839	3.17179826592328e-05	0.0012668968794928	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5457270283053	0
Merged-chr2-164372825-3	8.69650703245185	-3.21204849550204	0.74600826893662	-4.30564730881681	1.66498149470979e-05	0.00076190392684388	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22223883585122	1.04220233489076
Merged-chr11-4527295-3	4.92365989847061	0	1.29953181361797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46876141-3	5.28396554643036	0	1.3040309783331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136750157-3	4.24826720293517	0	1.31273044236396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21998837-2	6.04137097461399	0	1.29932988753448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100605187-3	8.38668468105125	-0.458210555572115	0.637868013771538	-0.718346970971066	0.472543375142905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83509031724442	2.0438339302262
Merged-chr8-56067062-1	3.13165515386515	0	1.39013839769884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95180680-2	3.58238639463109	2.45013208768457	1.26582781894882	1.93559665146184	0.0529171208162796	0.386101180980416	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15025660736152
Merged-chr12-70107105-2	8.35720380535347	2.25966914661183	0.622191781315262	3.6317888060737	0.00028146342861412	0.0070986141282201	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46484551353643	3.72269260972448
Merged-chr4-150210542-2	7.76350445633967	-0.710637993053351	0.639312533610204	-1.11156587067106	0.266324853593626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56211763916441	2.94623723803635
Merged-chr2-155249749-2	3.80115190274002	-0.448493825130332	0.972655131928917	-0.461102615313305	0.64472498547503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64327597781427	1.86231980429102
Merged-chr16-32703529-2	3.36702097865477	0	1.33304781140829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-5274538-2	2.78190905339058	0	1.35541577449558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27790803-1	2.21804454658627	0	1.40402457826262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16016981-3	8.6163586390661	-0.865552076315926	0.504762980618322	-1.71476932649785	0.0863875273587665	0.555225633402788	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86923132712008	2.54314374101268
Merged-chr9-13466593-3	6.71156485604207	5.27153948756759	0.954117316516501	5.52504330055981	3.29404360653728e-08	4.89210394347239e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.46967715556574
Merged-chr8-119831639-3	6.95671179746016	0	1.30842762548066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96873276-2	4.63602323462372	0	1.30729734914838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27221845-2	7.4187563848933	-2.12174732966168	0.646988224475362	-3.27942186487581	0.0010402001051252	0.0196283326796163	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11903138062643	1.486851288245
Merged-chr14-54735254-6	11.6953217951247	0.214910850058207	0.4914530548762	0.437296803684217	0.661896113092008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22993476778716	3.90749534007917
Merged-chr9-45312036-3	5.7505215995415	4.1106580741	1.13989241425088	3.60618074364631	0.000310736741313067	0.00768271021484817	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.61425725761568
Merged-chr11-96860756-3	8.49632515532282	-0.559208848042059	0.60281447584548	-0.927663270291807	0.353582266686575	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5460679594974	2.49898368658353
Merged-chr14-55736493-2	4.58016601678315	0	1.33834416349278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94476947-4	4.79030958120593	0	1.31819691353251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17186413-2	6.10444164631958	1.84354137457341	0.881752980375387	2.0907685208941	0.0365488192414695	0.295767076427624	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	1.82866868473699
Merged-chr2-130302475-2	3.23706161722747	0.791187255453492	1.10985095291124	0.712877033964009	0.475921851650065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44322523522721	2.25739071366548
Merged-chr6-66946089-1	3.68775752680077	0	1.36232356575199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87302130-3	5.4663112080135	0	1.30825472171371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36224795-3	3.5621484202228	0	1.31892568522926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65141149-3	4.14485467816158	0	1.32662771724418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55442200-1	2.66011355608442	0	1.41954949103085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30431979-6	16.3962389755055	-0.132041927026546	0.551683031434941	-0.239343825172765	0.810838985155562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33652900776864	3.89473179459799
Merged-chr13-63140020-4	9.96434553608769	-0.0141872526388615	0.627940484857514	-0.022593307775148	0.981974682088409	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35080191234317	2.30081306793583
Merged-chr11-55005176-3	4.4335332941044	0	1.33594477104563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166730406-3	3.67728016615037	0	1.31880336368283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56404747-2	2.66509462050349	0	1.36213780355731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33271954-1	6.32984301187875	0.842454070335246	0.716972394530451	1.17501604910043	0.239988295018584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57644648102297	2.59989886154962
Merged-chr6-47780626-2	7.65435853342209	-0.618501860846205	0.576090804397043	-1.0736187006032	0.282993612602852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8280348891487	3.4129085652566
Merged-chr3-127323034-3	10.2278558564911	0.43930086222807	0.483897022792499	0.907839564072804	0.363962991860996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21043605522596	3.6642034643686
Merged-chr15-61541046-2	4.88947728259762	0	1.31329000216024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80147948-2	3.05322812714276	0	1.32112377955073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86739111-4	4.85283868150475	0	1.30727701162016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84087731-3	6.21398656006265	0	1.34316442151238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32007049-3	5.46537526804304	-2.84793094346899	1.08953657014641	-2.61389201748987	0.00895173236329285	0.101909390768595	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94528935686194	0
Merged-chr1-88253602-1	3.23246392117138	0	1.31786138376521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44274914-2	5.01134350264758	-1.64846332311304	0.889743300271743	-1.85274036074176	0.0639195820659093	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97646133494995	1.13132003301738
Merged-chr11-115083578-4	5.1885497448805	0	1.30100733870055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-64941627-2	3.97183320241222	0	1.31920005391544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27974778-2	3.57324727782464	0	1.34552005546409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9098428-4	6.9199838445425	0	1.30061849066015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93069511-3	7.34357959861193	-1.6025971818345	0.996911492465095	-1.60756214964652	0.107931107542571	0.657286058251041	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56764892048293	0.609949614787909
Merged-chr14-14603672-3	6.11381178172266	2.36005853652543	1.05423168157543	2.23865263942608	0.0251785263406798	0.223825855396625	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.46928333126936
Merged-chr4-20065649-1	4.12597420537808	-3.9676912339857	1.10853735422369	-3.57921293212919	0.000344630585770436	0.00831311563593758	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47091117137245	0
Merged-chr5-68012883-4	4.8411659076	0	1.31533212106747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9619665-3	11.3449021503157	-0.53281036203872	0.499548390264737	-1.06658408358869	0.286159690929078	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98228207735283	3.32617013525489
Merged-chr9-78522045-3	7.20268294963948	0	1.29906241131062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25331243-2	4.14388613944187	0	1.30909219571384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80812706-1	2.48187810770594	0	1.38639275996276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53452018-1	1.47176334675859	0	1.55791637194649	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62956962-1	2.31369147136931	0	1.40083648481565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57522345-1	1.89212242041104	0	1.47439965791744	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50866049-1	3.98478295241154	0.441852438957559	1.0043694217711	0.439930198371033	0.659987663306895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.977951900024923	1.04885222765555
Merged-chr6-92944386-1	1.21078028767742	0	1.54815723536245	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27131660-2	2.24529091762734	0	1.4313619164171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-17823338-1	1.04571807476192	-1.27821138089978	2.39101038270982	-0.53459047695608	0.592933070165488	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25737737686238	0.609949614787909
Merged-chr11-46895537-1	1.73368557344934	0	1.56033314549846	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142384379-3	9.68198047349883	2.23612032363863	0.676754575873746	3.30418205263202	0.000952539541656539	0.018358054947547	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23219202454743	3.28434001305746
Merged-chr14-55608955-1	1.79405270508925	0	1.41143018041854	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31586678-4	4.24708515799321	0	1.311131063446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99179338-2	2.70376851249585	0	1.35062951396592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45955944-3	6.16940257621301	0	1.30500723518695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29572476-3	4.37794925026342	0	1.3209576990915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25158444-1	3.04535982350381	0	1.40659402350228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47274079-1	1.9604993727035	0	1.43442695771631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22851556-2	3.33081736220258	0	1.32904557250599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109212309-1	2.02597242151141	0	1.37878230501768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129803017-1	5.06129554408743	-0.616083785395409	0.933620363651345	-0.659886833429741	0.509326454167041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14930751978498	0.887107926668329
Merged-chr9-42896656-1	1.69091560462816	0	1.42297127398729	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82633355-1	3.99782537814379	1.06668212482592	0.82750683826762	1.28903119043586	0.19738724336371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53748904885833	2.22392366263603
Merged-chr18-20971333-1	2.28231403575158	0	1.50203570864934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72753065-2	4.97888263343984	-1.5432097130396	1.04960685748228	-1.47027403835884	0.141487549444747	0.795685576768687	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69113640203591	0.905469781553611
Merged-chr13-113613061-1	3.69717559185948	0	1.35174240508444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120247656-2	3.00074620910707	0	1.35933978233603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46172044-1	1.36846585787083	0	1.5208540088214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68738854-2	7.49905362284063	0	1.29252623698189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78858611-1	4.47490716923335	2.70753107250416	0.755684525367726	3.58288542588144	0.000339819682350917	0.00823686296713991	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4892862537703	4.37493801129544
Merged-chr1-86398563-2	4.40803444694257	0	1.3613547593791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11665275-2	3.57926043220173	0	1.32218304387624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105762294-2	4.32586709577801	1.94624605691756	1.19937088267194	1.62272244977445	0.104648750070287	0.642945426846567	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.73596151290311
Merged-chr16-38106692-8	15.3077873255697	-1.50364624383912	0.421979340372022	-3.56331720532452	0.000366197726443067	0.00866481396275827	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70451982402639	2.72978091692342
Merged-chr7-34380489-4	5.5446028085392	0	1.31016628006023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110666117-3	5.81846494454596	3.63778426015887	1.07976095644619	3.36906445675892	0.000754237885713403	0.0152259588754489	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.50954942419772
Merged-chr17-66107083-3	4.36678202670206	0	1.30240149737643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30849904-4	7.45640323239245	0	1.32037969817103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129978754-2	5.47194255800071	-2.55912162623814	0.819833891716982	-3.12151236011793	0.00179924694904567	0.029916944308483	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12426467244226	1.41959898789419
Merged-chr15-59705829-4	5.52986502167891	0	1.30488120155304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89268980-4	7.27130391327763	0	1.29351514420146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113727195-2	5.31430831709747	1.38792551208262	1.08510704550508	1.27906782822204	0.200873171548734	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	1.26501898168246
Merged-chr2-124910006-3	7.40146028970402	0	1.30160856496966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67260032-2	3.61482915902727	0	1.32124655276665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64047069-3	5.53931739002904	0	1.29753384170382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110258488-3	4.54565470171508	0	1.35458414656151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35741047-2	4.9035095539143	0.10181167785485	1.09267509467326	0.0931765337666949	0.925763316614766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.985703315538194	0.581381506691384
Merged-chr3-86842777-1	1.75083836709689	0	1.39194151347046	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25206040-6	19.3042247889735	0.281792907417816	0.479897257445314	0.587194244280355	0.557073257542283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93609958097972	4.29604044143714
Merged-chr2-13559501-3	4.25791642056026	0	1.31110512197618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36323920-3	4.71759106369653	0	1.2993996112868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3620667-3	4.31418756796695	0	1.32004808356403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66277891-2	3.87878527280879	0	1.31424601881267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-48488530-4	16.2633835746713	-0.817846924891831	0.429910386707148	-1.90236605157656	0.0571233159999464	0.409430756535318	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.19519669165358	4.35947214506059
Merged-chr15-67301854-1	2.28096600983765	0	1.38191991183736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-84544863-6	13.8285583828356	1.50411661602913	0.50705213552121	2.96639440140216	0.00301313814291099	0.044506447804399	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47866879644684	3.84400700934354
Merged-chr3-105045568-3	3.81127024905352	0	1.3082016784794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139832295-1	2.32197695010672	0	1.34560408594772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87742223-4	7.23538661593411	-0.188683713052198	0.8253433326689	-0.228612391454177	0.819170192620664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71320465516561	1.38353752608252
Merged-chr10-67625547-1	3.00202456258172	0	1.35291725915779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58595101-3	5.69123478349566	0	1.31599566253568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87023330-2	5.57079769326744	-3.10029694904608	1.06948604114164	-2.89886621216357	0.00374514663022572	0.0523375431348867	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34504407465971	0.306240821987646
Merged-chr6-72101094-2	3.79323952430852	0	1.36945236529843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129905001-4	13.4948842258384	0.197123153643009	0.450704486522097	0.437366743704126	0.661845398325373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92113562713125	4.22806728239309
Merged-chr5-73133987-5	12.1358032275388	0.731035542439197	0.626746021727872	1.16639837684779	0.243453414493796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62019473376325	4.23894488376075
Merged-chr1-156010606-3	8.64902795071908	-4.08587446265385	1.05741351176336	-3.86402709744099	0.000111532840743397	0.00345741224441084	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57547859206613	0.306240821987646
Merged-chr6-5583179-3	5.67962110024178	0	1.30181863087319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111724849-1	1.85198769420807	0	1.39214593822076	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72597965-2	2.97298590417456	0	1.41101495804162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13396217-1	3.07359040478626	0	1.34839945534711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29903561-2	2.68158035513638	0	1.37730833465227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8255582-1	3.15179416394193	0	1.35340439966167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36918111-1	2.77769945274857	0	1.34530539260831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82953021-2	10.0555891955516	-1.54248538466068	0.605537705530244	-2.54729865799189	0.0108560478893577	0.118134771919728	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72732963846553	2.72321832238862
Merged-chr4-65562636-1	2.00113673682388	0	1.46042908651131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83812150-2	4.41138445579801	0	1.32588724693305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122824666-2	3.82165480973005	0	1.3597970728203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122810323-3	5.53765616731848	0	1.3007455531544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40479923-2	2.42698593653835	0	1.3986889229771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114224681-4	6.32246212694769	0	1.29960236744909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51908359-2	4.37541762238954	0	1.31743751534279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86852393-1	2.8354331726631	0	1.31881606219819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78523514-3	6.53071194548944	-2.40600635993947	0.650622030802373	-3.6980093603229	0.000217296878111403	0.00583380517545922	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99988981263708	1.6995072319729
Merged-chr7-127229078-2	5.35144468820139	0	1.30153801580994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63581361-2	2.2213210972913	0	1.53743151206603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41049501-2	8.70073775314096	-2.4298385537955	1.08570347112709	-2.23803148687831	0.0252190018796797	0.224120889001707	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10809739912583	0.306240821987646
Merged-chr19-57436618-2	2.0582700267119	0	1.41297536750579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73528581-2	3.58299137214462	0	1.35020291185348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99146896-1	5.19398868933434	0.0977844545864903	0.662328999209935	0.147637284043328	0.882629029105947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17192457182916	3.4780911357035
Merged-chr5-119240781-1	1.81757454980964	0	1.48716273947144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53108964-2	3.3180119117523	0	1.37140615650257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37778918-2	6.93070854570696	0	1.31777520871603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55377921-2	2.59730788426193	0	1.39298763812704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27561806-2	2.38620483999593	0	1.38315724821562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27283571-4	5.54171239664659	0	1.30827215739574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100936321-3	4.86626529405219	0	1.32895211879937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25535598-6	15.6135410714817	1.25002238441749	0.466868128041884	2.67746352628584	0.00741819288262004	0.0878330976362056	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27336774970157	3.9258474097067
Merged-chr12-85487972-4	7.58463861548003	0	1.29315254563751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99904566-2	4.22257314255566	0	1.31374065245317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3803727-2	3.63655484557831	-1.65117719798351	1.25889972109887	-1.31160343457875	0.189653973581776	0.980624193517547	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20788126048703	0.793480537552656
Merged-chr8-16429954-3	7.13573570258586	1.53211098527984	0.837462263857074	1.82946868342873	0.0673294265809607	0.461960175279237	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18351401988243	2.56376965164983
Merged-chr16-49766513-4	4.80530860324954	0	1.30401784656051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-73564636-1	3.87174369781702	1.24187851428102	1.10258204679318	1.12633660043076	0.26002307122919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	0.666688015277142
Merged-chr10-77537763-3	4.20985302314063	0	1.32456840274709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81833241-1	2.91793987439131	0	1.34072970123033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12011052-4	6.27014802165422	0	1.30087051347411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91959170-3	8.27844981235332	-0.917605867415585	0.570362268746871	-1.60881235961074	0.107657377488878	0.656003262718038	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4292633345403	2.16454203713377
Merged-chr11-57934464-5	15.059419067966	0.788448886983163	0.437312346762592	1.80294220554261	0.0713972917260922	0.482873879645334	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5799834666623	4.121138130281
Merged-chr4-43741989-1	6.03713612441514	1.03084913339554	0.612864537225865	1.68201791877481	0.0925653653098221	0.584705303193392	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68347874561268	3.57629785625868
Merged-chr6-108721776-2	8.81948712699512	-1.43683839361939	0.622260839156254	-2.30906125406774	0.0209401824247604	0.194203400614305	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95719504266851	2.29666818073796
Merged-chr6-71196280-4	4.50305822094188	0	1.31148298459843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116098740-2	6.67490290096481	1.04626325670725	0.837593854177191	1.24912957692967	0.21161768428865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88088687198317	2.94975811652544
Merged-chr1-155391702-2	3.61448724187013	0	1.41406854233353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109629008-2	4.83061621579938	0	1.2992482349406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116669772-2	5.82113243008066	0	1.30709427383175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121464127-4	10.4782784777548	0.0048307586212687	0.784500574410534	0.00615775026665657	0.995086857182308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46761773964017	1.60230598860646
Merged-chr4-46356943-6	10.966375884422	-1.08961042349481	0.532774204211521	-2.04516362631967	0.0408387291819438	0.320982390801455	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60815311010467	2.12921398847593
Merged-chr10-68176493-1	3.27014192566757	0.810647247146196	1.30729352112594	0.620095819374983	0.535194704409134	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	0.469435083901436
Merged-chr7-67441429-2	5.4226634636009	-1.61666199432484	0.821696789557531	-1.96746782373993	0.0491293018734834	0.36619178284757	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70515390419577	1.20275690226768
Merged-chr2-102914333-1	4.99336371439143	-0.216496337526373	1.24853832905182	-0.173399832819539	0.862337156505375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	0.420961122473315
Merged-chr19-53107086-2	3.77702593802324	0	1.32716090795227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115313046-2	7.1558468101252	0.906042514770333	0.641037409206025	1.41340037532683	0.157538035319447	0.858374089550954	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87595302407503	2.93016308902745
Merged-chr1-184606070-2	4.72418378909348	0	1.36141944641615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113505268-2	3.03068458692127	0	1.33246696440999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166154356-2	3.89698925499774	0	1.33870579177443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81176571-2	3.36798987393106	0	1.34931884222923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106299523-3	9.99741085712828	-0.610192955014798	0.68828124395542	-0.88654595831805	0.375323400283354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42071685118795	0.926147595614233
Merged-chr6-97402734-2	4.08096358180031	0	1.38668106940495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57740873-4	4.96042110309194	0	1.3098036126512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17178068-3	4.03367778207011	0	1.32670042271991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31235243-1	2.95629337443104	0	1.33700154086901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12004870-1	2.12873498437295	0	1.37628995428966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77827572-1	1.94810324834731	0	1.49771957787423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49794558-1	1.30574794404775	0	1.43523864664626	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38573586-1	1.34551830156693	0	1.58139922538903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19142719-1	2.11033371156339	0	1.54679546829657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110382501-2	3.76147051697167	0	1.32459719221652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75767739-2	2.38078089396179	0	1.46408516270134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119830764-2	6.36823264042008	0	1.30320604146535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82108954-1	3.04787224473991	-1.71285332660167	1.2042969343973	-1.42228488479785	0.154943565052619	0.848980563636459	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65583600571242	0.469435083901436
Merged-chr11-103053387-1	1.47595842923447	0	1.49935359981791	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8499529-2	2.87567630172187	0	1.41520544151832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116169221-1	4.63474569502194	1.688450527947	0.869627090073107	1.94157995676636	0.0521879712510625	0.382274988159615	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30913422109967	3.18291157746898
Merged-chr4-138866576-1	5.04718701542948	-1.73001216364558	0.934920088837867	-1.85043853940077	0.064250368652383	0.445890461975215	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7194335206225	1.03295826569721
Merged-chr10-67643866-3	8.18732143139908	0	1.34251337072471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-93030871-1	3.52336359827251	-0.886182096981992	1.12858716016042	-0.785213697501242	0.43232828577609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78062642687079	1.29358708977899
Merged-chr4-109546697-1	3.1762493844283	0	1.37970789679865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82921586-1	3.24671744392164	-0.161288577644915	1.0774742756085	-0.14969134882949	0.881008133907232	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68964135302238	1.41959898789419
Merged-chr2-12371637-1	1.34769626720196	0	1.51011871365628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76833097-3	3.80120485265514	0	1.34093523204153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63907310-1	5.96648848430235	1.85019802697569	0.839970039587142	2.2026952626609	0.0276162343943274	0.240518519623047	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20203964482637	2.32152722112794
Merged-chr11-114981217-1	3.73746620946827	2.68154192727504	1.10252749115626	2.43217692872475	0.0150083739935483	0.149639488401344	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12000521415173	3.43863395111552
Merged-chr8-46742753-1	2.88881378972166	0	1.34599541295725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84204286-2	3.11882255929723	0	1.35329744681701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148867776-1	2.85523103732706	1.33680029193041	1.34423649646916	0.994468083139923	0.319995036499643	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.469435083901436
Merged-chr3-126651452-1	2.895805772253	-0.977666990412153	1.22424260492627	-0.798589255494036	0.424528619837292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71934199246503	0.989878296978726
Merged-chr1-165780576-2	6.83980870326576	0	1.28939109315503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37130798-1	2.46001957975462	0	1.39125464161057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73426015-2	3.34557501170468	0	1.32478292166484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-107990011-1	2.26981466985649	0	1.40569718416023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21866728-1	6.18391355815317	-2.05210686712541	0.717792404515859	-2.85891415709467	0.00425093801720099	0.0574630216458555	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58621459318985	1.34557707159302
Merged-chr4-83262386-1	6.21557414392027	0.976527436245517	0.754344321140374	1.29453806289581	0.195479630631557	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27269829952545	2.85971213640217
Merged-chr8-36260658-1	4.15943123299907	1.07252801667683	1.00108359399636	1.0713670897305	0.284004404497219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25518019904733	3.11038056962808
Merged-chr11-43492888-2	3.22823628876463	0	1.33945981949602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29855188-1	1.84588827996793	0	1.36001425211104	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65820083-4	10.6688696001716	-0.848608461405723	0.622180868323982	-1.36392567597214	0.172590958875273	0.916846500175887	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09533749968249	2.37816961274976
Merged-chr6-145747353-3	12.9455998354129	0.957885555612545	0.560373760472856	1.70936903755854	0.0873826124878444	0.559430214130565	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48745684961085	3.30826573864485
Merged-chr5-63821362-3	4.68059375315729	0	1.31147056373091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97444048-4	5.68606857595188	0	1.31279588857492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13560188-2	4.64360077011769	-0.905719943985764	1.05398042495335	-0.859332794559115	0.390156936002481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42648459735859	0.992113827166316
Merged-chr8-121898696-2	6.45439317028877	-0.990011565218017	0.752062981405983	-1.31639449048162	0.188041670678543	0.974846607293351	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34890654929204	1.51967923719821
Merged-chr6-108447775-2	4.28171734503514	0	1.3293671546319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32623979-1	2.74384282258997	0	1.34258969102383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62687583-3	3.6798527171772	0	1.34268871208066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115333878-3	4.70835561660279	0	1.32585813038616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115823998-4	4.4305783021883	0	1.30887576407932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19024679-1	6.18234898524466	-1.38982482524073	0.831047883382619	-1.67237634922277	0.0944501328047628	0.594026792902794	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32728788927165	0.989878296978726
Merged-chr8-126881236-2	3.80707420235596	0	1.33469375925549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57745307-2	3.488837266411	0	1.38770321158766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8842071-1	3.38334415773116	0	1.35946248974101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56808719-4	5.30150876130995	0	1.29587222207475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158506805-3	9.23140109769892	-1.75956771917079	0.553271030486966	-3.18029974860981	0.00147122783658194	0.0256028906016733	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4314872548893	2.68099393481061
Merged-chr18-9790613-2	4.99325995377591	0.182735326806264	0.708055625376071	0.2580804674904	0.796344805763121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90279636622714	3.27620127671797
Merged-chr11-89090584-1	2.36128109483271	0	1.45166592766664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11761820-2	7.70965535874999	-1.12096940333572	0.709987039567067	-1.57885896624149	0.114368409792662	0.685224685831892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02784629720486	1.87496859647037
Merged-chr10-75227212-3	3.3534231416103	0	1.39157578619305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72260096-3	5.00323359062176	0	1.31249589055269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67124330-3	4.69321174897353	0	1.41789265362536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85873953-3	3.33734377281187	0	1.38099482963214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33010194-1	3.75607924306015	2.78308674957439	1.17428490445574	2.37002684698932	0.0177867936622765	0.171026459484273	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.963545719069792
Merged-chr1-135112858-2	4.82075052883545	0	1.32606842122744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170937258-2	3.38233561030201	0	1.37886183114451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76674082-7	25.9333144168338	-0.73999722213799	0.369174284513474	-2.00446578534909	0.0450201884663886	0.343750979493584	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.35747576453147	4.65521611849038
Merged-chr11-83687324-4	4.37205830511746	0	1.3074036710315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46864159-2	7.34668831157868	-1.5167271385068	0.777021763822441	-1.95197510433362	0.0509411604282796	0.376008253625478	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8169627781902	0.898163539755574
Merged-chr8-108731042-3	4.61811106103411	0	1.31571088431548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125314319-4	8.51708217840422	0	1.30538615236557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78908107-3	4.40091384035472	0	1.34160278230383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55153079-4	5.31653563830034	0	1.3083492059035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44635377-3	5.2015017510029	0	1.31221444112627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54219008-2	4.66181628752389	0.799434006739661	0.95819889403878	0.83430904764466	0.40410685470559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25207397851033	2.00098049458557
Merged-chr9-8017447-2	4.36774128989437	0	1.31952060930354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100410239-2	4.15308224269515	0	1.3443353397478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36999447-1	4.97333628921259	-1.35773356059654	0.902252552077276	-1.50482651167968	0.132368685797492	0.760151519652246	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47373404743746	1.62306943957144
Merged-chr12-110687023-2	4.03694964327474	0	1.32722107611022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59634161-1	2.07891426317054	0	1.36489957500657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121423974-1	3.9054360059092	-0.0746905042598062	0.771432895373881	-0.0968204813506259	0.922868958582429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07935996295396	1.99834080004871
Merged-chr9-75049297-2	7.42770145831561	0.670767668500123	0.540053565581106	1.24203914435481	0.214222119789731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87439014107372	3.47159008109517
Merged-chr15-57762367-2	2.96364178545733	0	1.35491696408535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86923801-2	3.81107102616216	0	1.34548981976482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117438319-2	3.71290187555674	0	1.36830480963387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87613537-5	14.2525053322415	0.838411916236977	0.405386880528662	2.06817723144767	0.038623360444635	0.308096603208543	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41487516905688	4.31647137603392
Merged-chr13-48981220-2	5.19956595332114	0	1.31147674688344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84330063-2	4.42148593875196	0	1.33502445878869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67698726-5	11.3930955128682	0.334425622537854	0.5638572610022	0.593103336017073	0.553111998007363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19687275897402	2.42760559021134
Merged-chr16-30602886-1	3.41574496914953	0	1.30637044327073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63144314-2	4.60992605475872	0	1.33777050469051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134292297-4	15.4075768257869	0.884216064826862	0.442409548230388	1.99863693802196	0.0456476507240762	0.346928516424224	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09601622253494	4.99929276287373
Merged-chr1-39944538-3	4.98307029289963	0	1.31245156375964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3771268-4	4.77841731184047	0	1.31961579390093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46137349-3	4.72745020784501	0	1.31140462492216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112001190-2	6.79022803858134	-0.330262347259632	0.60991192730351	-0.541491865423519	0.588168603016212	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99688341467627	2.66739880572649
Merged-chr7-64404191-1	2.88861955073333	0	1.37626851994708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151096123-3	6.38805159983078	0	1.30562205087762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107067469-3	4.01041282306206	0	1.33842997302007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33443233-1	4.92817625025164	2.21767047402618	0.873637434580118	2.53843343502333	0.0111349983070439	0.120330371893059	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	2.1359713465465
Merged-chr2-181675629-3	4.73385292193475	0	1.30904577438275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24381554-1	3.99764619066597	-2.20084504073195	0.863362445857285	-2.54915539967296	0.0107984170755041	0.117644775294414	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.180117185247	1.03956264035389
Merged-chr18-67183181-5	19.0695196972484	-1.11968804850364	0.351309731577566	-3.1871819874606	0.00143666347936179	0.0250865844219566	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.88281360300854	4.69869990927066
Merged-chr3-68713757-2	4.96100299680052	0	1.30570085016409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152474791-4	5.35338109321722	0	1.31096916902561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46936240-2	5.04138248099947	0	1.30495162657455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65205616-2	3.2509503240879	0	1.33407356060818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169795103-2	3.42911521881841	0	1.37489203624173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99298914-6	12.7932697925704	-0.0446889809233362	0.560638339159012	-0.0797108898944943	0.936467198132549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92033521788636	3.21142567839502
Merged-chr12-41186173-2	3.68150599855067	0	1.41541156691572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88185373-3	6.17253999617143	0	1.33259905236363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61802035-6	13.12904685759	-0.382700488935186	0.55581385824035	-0.688540746621137	0.491112320088126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8739520647303	3.28672609952657
Merged-chr1-153910599-4	6.215046502047	0	1.30315319363304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155094221-4	8.37681077497604	0	1.29760585326949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125745018-5	14.0207699621039	0.381628535826528	0.649598956973192	0.587483295239153	0.556879166327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10219246028415	2.05801908341688
Merged-chr13-105306212-3	5.22373891054914	0	1.32558830080052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17724723-5	25.17044875186	0.393717414158229	0.326930676355428	1.20428409639416	0.22847979142625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53753119303713	4.99292422908067
Merged-chr8-128453077-2	5.85320139964017	-4.67623407495641	1.027705146389	-4.55017092342788	5.36023561783564e-06	0.000305912625924094	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09201425965821	0.306240821987646
Merged-chr17-10232622-3	3.73588615708378	0	1.30480673556363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59235791-3	6.49019896969894	0	1.33798538084837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165948281-5	13.8221700900388	1.90459764447603	0.569482855201059	3.34443368589841	0.000824507382196736	0.0163277153790927	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80100654276585	3.90924783284374
Merged-chr16-89774511-2	4.94471716183248	0	1.32047365433467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21981639-3	4.70807531897512	0	1.31551537618935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81067281-1	2.52734919523283	0	1.34799068919858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94149884-1	2.84085583262972	0	1.37986661087552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126574835-1	1.04370353432575	0	1.7721132798675	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90551709-1	2.14122488771062	-2.26287871318336	1.33723221969013	-1.692210731886	0.0906058010314067	0.575615946313965	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	0
Merged-chr11-106305575-2	4.26547140097408	0	1.32558024137979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-37246772-1	2.64466922630585	2.5779227667965	1.94749848191989	1.32370976959895	0.185599452586264	0.966081076047634	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	2.22281280114811
Merged-chr4-102691612-2	2.51402786575382	-1.00290873305177	1.37588199940727	-0.728920600374027	0.466050232709969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0
Merged-chr1-39594690-1	1.31350607643213	0	1.54820096256443	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136899308-1	3.58289338293112	1.28179932003833	1.08028741591793	1.18653545450141	0.235410908626658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.871810791226776	1.38860239282551
Merged-chr11-4083557-1	3.39383262910856	0	1.31942157704813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157371517-1	3.77594670661998	0	1.36815335764791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143220760-1	3.2176135152668	0	1.43448479878315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117444505-2	3.34131934544803	0	1.35179389235211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146094207-1	3.06788575996755	-1.00776208340389	1.1035832233797	-0.913172710543423	0.36115171401937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90463906611812	1.69442907999601
Merged-chr5-104033214-2	3.37112740829236	0	1.37285018673324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35034866-1	1.87995948604778	0	1.43426899367345	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4938683-4	5.09030321257254	0	1.3064022978448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79915293-1	4.17289677768966	0.614119281931471	1.06579642154961	0.576206927997165	0.564475322989412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78481811442015	2.57387282706098
Merged-chr14-58319394-1	2.58575954243994	0	1.35268534113718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-138827974-1	2.38648575676321	0	1.34677649939933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41891516-1	3.12026656432121	0	1.32061373553021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172348742-1	3.27196567780765	3.73853274475012	1.1500929161831	3.25063539836197	0.00115147423786588	0.0211836248726305	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.842787970578192	3.84215379444533
Merged-chr8-61451459-1	1.79684486094629	0	1.4290900767751	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5668446-1	3.55601265241729	0	1.37763665595999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-141048455-1	2.48376006780734	0	1.37067105574455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33067991-1	4.78014705554691	0.984822770588147	1.04001513287613	0.946931193072785	0.343673841748857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16143516416972	2.57625825553269
Merged-chr7-66136437-1	3.20603320014496	0	1.34469594784852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76605333-1	2.22920346677887	0	1.39318980398646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108112329-2	2.82633420387692	0	1.34340298640081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143316008-1	1.95314114356423	0	1.4256014401887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101753932-2	2.15843674385163	0	1.40647982862622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51867659-1	4.14367552959838	-1.0785999886971	0.903233782433019	-1.19415372816515	0.232417839504453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04661341730221	1.486851288245
Merged-chr4-40997796-3	4.49372734575041	0	1.32297601911781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52029359-1	1.52172967612165	0	1.40598960688051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60864586-2	2.90682924155879	0	1.4985565129963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114229452-1	2.52071945206877	0	1.35654208302596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82934448-1	2.07806490499381	0	1.40589814429646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142103470-2	6.00365191503737	-1.56876714503776	0.815348356463059	-1.92404526556354	0.0543489098690591	0.393658925607021	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62736256856971	0.989878296978726
Merged-chr8-90824453-1	2.3080849413829	0	1.38332735633886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20861369-4	5.49790427783516	0	1.31696782452876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54231490-2	9.92757590739879	0.719215976636461	0.545917974025735	1.31744329891317	0.187690075319896	0.973937557520363	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20279108992027	3.20013369860462
Merged-chr5-16470506-1	1.83968653851085	0	1.47860542340946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113805160-1	1.80931259745902	0	1.41450086575507	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90024400-1	3.8677531705116	0	1.31789451500987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23861257-1	2.73490081169061	1.15161243518162	1.75279793961911	0.657013800137092	0.511172043061856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.808340254822995	1.56763655772049
Merged-chr15-79757286-7	18.1668701096666	-0.224445678694155	0.534923866779892	-0.419584342058361	0.674789128855551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52776935256352	2.68895368771448
Merged-chr7-139296588-7	12.1882992216305	0.214857462920655	0.626294446269046	0.343061421349976	0.73155225316424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08327009930917	2.22781771998735
Merged-chr19-56256966-3	4.08477191793019	0	1.31715119507941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139636643-2	10.0507531325055	-0.24529862352175	0.654572775586465	-0.374746143852339	0.707849271042335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7147698041948	3.19442297417859
Merged-chr10-59310839-2	3.8338994780553	0	1.39883086406224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34789220-2	3.40687959650413	0	1.38134298423396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67210523-2	5.03536287730321	-4.88483240879174	1.06868266790083	-4.57089139322041	4.85653946452743e-06	0.000282970401546513	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66380824543163	0
Merged-chr8-79362600-3	4.54401599206697	0	1.33359320590685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26500485-5	12.8002762623902	2.22202403230406	0.632513671661846	3.51300553941543	0.000443068239432741	0.0100425727277044	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07736140833484	4.06304005252398
Merged-chr14-70959018-4	8.6057383033865	-0.0956694228168084	0.596217697921001	-0.160460555180441	0.872518291367981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49151894098919	2.59774523910698
Merged-chr2-58281269-2	4.72795680182776	0	1.32851737619314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48829847-4	6.58370454245914	0	1.30576092342499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127440729-5	13.0399336798857	0.158146617836928	0.770556984075944	0.205236758740923	0.837387151349263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38909562954107	1.41695929335733
Merged-chr6-108246587-2	5.51287221372533	0	1.32082051357962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86538190-1	3.39269666224972	0	1.33938110311016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40765274-4	13.417010919965	2.17170930717558	0.855346487152619	2.53898196788652	0.0111175553229267	0.120239617698108	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	2.34016897559916
Merged-chr7-4293034-6	16.9238312137796	-0.0505262815801664	0.731629956913816	-0.0690598862207582	0.944941950918929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58265492568976	1.40646071772112
Merged-chr3-133757985-3	4.743915158015	0	1.33989105132386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165679777-1	2.62624176394168	0	1.35757340738477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52283628-3	3.90791753536554	0	1.3170872340743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80833828-4	10.1693652444525	1.48417889097927	0.694080330196868	2.13833878646049	0.0324892567480178	0.272429484339275	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75789269522153	3.72949239720653
Merged-chrX-109185262-4	5.00425657785306	0	1.3681054111196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54353479-6	10.7479045773076	0.323605439209255	0.533306200404797	0.606791068552416	0.54398957614141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75622696318666	2.56043926935404
Merged-chr9-121928687-3	5.51093962125402	1.32662813202442	0.768528775878552	1.72619187942295	0.0843128984921105	0.545604145857145	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50968057923335	2.73430231295182
Merged-chr2-158379902-2	3.95219260732939	0	1.32249442198261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47277600-6	14.7913649596412	0.716774881772949	0.526471312007275	1.361469970776	0.173365217092301	0.91991258433727	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76259661439827	4.40015988079645
Merged-chr2-32854386-3	3.70132966232512	0	1.35201042188332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51044053-1	3.0909350539117	0	1.42335159638825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75695885-4	4.69861155240673	0	1.3305172938413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101364979-3	6.17711933379184	1.75246009657568	1.04317651227201	1.67992671993628	0.0929715743068901	0.586624862489319	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.31734301959449
Merged-chr1-84437754-2	4.81749295294663	0	1.32469371082345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29431644-2	4.01888213327372	0	1.30843470558347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113612590-2	6.16108597058877	0	1.31933485654507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124683801-4	6.26646843353422	0	1.29148023871302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30795121-4	6.56897837680514	0	1.3203679290913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68127342-6	15.6033903437802	-0.904346492870614	0.653532329423111	-1.38378233509718	0.166425113601119	0.891776586582921	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31308928193073	1.60978507060531
Merged-chr8-84647625-3	8.13013335777577	0.47140638152549	0.795412331413931	0.592656617087536	0.553410980468278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00201937338015	2.30670691456252
Merged-chr10-96294912-3	5.15399762096249	0	1.30826287858882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84551211-4	15.0879838138674	2.5667648982197	0.619923785130999	4.14045235847388	3.46621595864656e-05	0.00136324409966281	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22295700234658	3.86752336683508
Merged-chr3-87361508-9	21.814051419595	1.04041701646532	0.390994329408716	2.66095167681511	0.00779201391644356	0.0911034069393309	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21191773877045	5.47949689210297
Merged-chr15-58272602-3	7.84329573907348	0	1.30242395690455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121505404-7	13.3509108523565	0.0661965995975791	0.485917246176855	0.136230191701173	0.891639308127321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49405452159145	3.64870829608822
Merged-chr14-73473768-2	2.96436151060373	0	1.33053482380399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25546284-1	3.02812290252417	0	1.3411321227925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98128999-3	4.74665473404295	0	1.32208544981888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11568147-2	4.78536390828199	0	1.31244677387163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52229821-2	2.71924247309899	0	1.37158583290239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70500437-2	4.32833509472009	0	1.32392619046312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4948152-2	3.90175831253601	0	1.3704719549341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15012517-1	1.85196247733924	0	1.60948614631226	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3535825-2	5.98268473573936	0	1.30641846332541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64865445-2	3.2728415322436	0	1.32685062476882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32013544-2	7.35534076863385	2.02113139421615	0.723738857427157	2.79262523142827	0.00522822257124742	0.0674524567540087	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00002262181598	3.67925131530661
Merged-chr10-7052428-2	8.64220205126894	0.956013552852966	0.529009532268886	1.80717642034292	0.0707347762250815	0.479484926058524	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62915685166797	4.47894634843816
Merged-chr5-142911713-2	4.71997576160029	0	1.32536372831195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57725680-4	4.88772446763445	0	1.31381152627939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121819976-3	4.99483662474443	0	1.30967362647653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3079462-2	4.27546538972961	0	1.32996677748001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87369370-4	5.67543472670866	0	1.33108399890285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149120116-1	9.46923206979396	2.20380401210228	0.555649597993405	3.9661758418629	7.30349894396404e-05	0.00247795660432126	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39219079468056	4.25471071506185
Merged-chr2-93458508-1	12.1551785622751	0.19283321442636	0.586962634255481	0.32852724035995	0.742513051357832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9552929445667	3.05088414240024
Merged-chr6-134702351-3	8.26715104457075	-0.517352488230578	0.581963306053802	-0.888977849374492	0.374014984390474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14530509984699	2.98801616977499
Merged-chr11-3179100-2	5.17840751230062	0	1.37565043853617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84121535-3	6.8827980420799	0	1.32475727124138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50223183-1	3.23266299623191	0	1.37531628132481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104062025-1	5.72342244377232	-1.98845060869293	0.896230639542634	-2.21868180015323	0.0265083800633787	0.232824812314723	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72152305955615	0.73596151290311
Merged-chr17-86237579-1	3.46465101338071	0.190195362044509	0.900106005169857	0.211303292003498	0.832650614272552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29928215570356	1.31734301959449
Merged-chr16-19768256-3	3.60801330766607	0	1.34064862590962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49045838-3	3.39502795815848	0	1.38355036381489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64098233-5	9.95471827522178	0.329468662153557	0.527659064654994	0.624396858166318	0.532366987910911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1776820741482	3.24469772001696
Merged-chr13-81134642-4	6.39129105089049	0	1.32716965707498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-69020789-2	8.43479493819178	2.21932705215427	0.770692171087198	2.87965433595039	0.00398111389781966	0.0548523100062753	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11853524844909	4.18625218219472
Merged-chr12-11217865-1	2.33891340627678	0	1.3743609966447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117945144-1	2.78839508514324	0	1.33769589492419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44175927-2	6.61726065615531	0.349513715959891	0.815942898435633	0.42835560751861	0.668392239472152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63219259749214	1.26514550294121
Merged-chr3-59235614-3	4.97871604840477	0	1.30668317600912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150496826-3	4.05020929038713	0	1.31404057656672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38380328-4	5.96232066987564	0	1.29634736928046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78859949-4	7.14704076937526	1.42741661049123	0.70828157282103	2.01532365836646	0.0438707475978406	0.338143179114	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45286482345041	2.66803394061347
Merged-chr13-107855753-3	5.45852230494984	0.959545556866396	1.02707014143654	0.934255138139156	0.35017229962801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	0.773587911294612
Merged-chr11-114954246-4	17.2109981413851	0.514522952554311	0.464788106037781	1.10700542004078	0.268291584973437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27980148102959	3.95258078386244
Merged-chr9-13742621-1	3.04910565045192	0	1.43161911971161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92977585-2	3.78507659079057	0	1.34208207454598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60681693-2	6.07870679150287	3.01726628365528	0.991235476738709	3.04394501050596	0.00233497816441782	0.0365114819650745	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	2.53445394600757
Merged-chr13-98683529-2	8.98710827868784	-1.67927993457912	0.760011041609798	-2.20954676003417	0.0271366337557609	0.237036555193684	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33761481818607	1.35032549026822
Merged-chr10-83910889-6	18.4661028594973	0.791923330237992	0.46325015231943	1.70949394462785	0.0873594924275312	0.559397596235204	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02166474888725	3.65539681113077
Merged-chr11-94277160-2	3.78779439527219	0	1.33295073352711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103153492-4	7.17227958381866	-0.103425237094916	1.01351995970148	-0.102045584899363	0.918720492394781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05508994349271	0.73596151290311
Merged-chr5-137823404-3	4.89327134684304	0	1.30928026542748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49101690-2	3.90813702477178	0	1.33453120816475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62106706-4	8.21340085588587	0	1.30941028845729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11973562-1	2.04741219092905	0	1.38520004188046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94614159-2	5.33684621071775	0	1.30391531698608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20794380-3	3.35985302647352	0	1.33207082615057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52750950-1	2.97726477777718	0	1.33697542743663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121426734-1	2.91569623606955	1.95160338482126	1.36000664946614	1.43499547269666	0.151288387705673	0.834128500085632	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr2-32325537-1	1.63772376792263	0	1.4475499631875	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75563192-1	1.81294235047791	0	1.49528643645815	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105893239-2	5.35358169371843	1.99415319281075	0.799409252593993	2.4945335400359	0.0126122806383814	0.13210118827512	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11438437634714	2.70313208943897
Merged-chr11-115658714-2	4.03605669803724	0	1.32731317485468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79811801-1	3.64091898411555	0.778684823033548	0.912569925922992	0.853287842294354	0.393499700464555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20244859869596	2.15258675016244
Merged-chr3-66004798-1	3.10295281774008	0	1.33396130926929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103720835-3	4.39301953492925	0	1.30217813741958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11773759-1	6.79176775873527	1.96222869438182	0.798046570803436	2.45878970748079	0.0139406248978567	0.141916821089787	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55060105741367	2.79635897848801
Merged-chr2-60948001-1	2.26603389810099	0	1.36823409890437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8736590-2	2.46605311661068	0	1.40604053049378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60017170-1	4.34131251818621	-0.765085978765045	0.876341646948207	-0.873045325906167	0.382638372783058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01771527236541	2.42216910918563
Merged-chr2-165027374-1	3.17068821698954	0	1.3691193473224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144908276-1	2.0241381558339	0	1.37985625525632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34268332-2	5.33984523179118	2.78717925341046	1.11144539056935	2.50770688066166	0.0121517423894235	0.12865647410552	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05755081291805	2.03577643547839
Merged-chr1-20067545-1	2.72113382482272	1.08438452165754	1.05901009840316	1.02396051113454	0.305853927024526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05036700877702	1.99521245973132
Merged-chr15-58775747-3	4.23785665971889	0	1.32727227344686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35870513-1	3.38346876143647	0	1.34743344925503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152724171-1	5.59622078372058	0.937368187431237	0.815173260919507	1.1499005577954	0.25018483112938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71277677488265	2.49898368658353
Merged-chr3-9724340-1	1.67865108124471	0	1.55607147691541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132807930-1	3.27227638422212	0	1.33614950652085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-81032628-1	2.92804227695608	-1.69901956461662	1.27904649428733	-1.32834855668268	0.184062985648854	0.959841980704653	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32586512976147	1.07982873328226
Merged-chr12-99390588-2	5.72789593620838	0	1.30474516977891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13551713-1	3.05648013281912	0	1.39313550121476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71950367-1	1.41076133067813	0	1.45229960271171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77272856-2	3.3355550240304	0	1.3761984366912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183197736-1	0.996142882336666	0	1.65276098990372	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5033932-5	9.82297510136613	0	1.305795828565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36931647-2	3.38254185575285	0	1.33676201327082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123091985-2	3.76092298471148	0	1.3260154053987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30210982-2	3.93102014081718	0	1.33543328635599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55737603-4	8.5395990862334	0	1.31303469072187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14781459-3	8.70904137700823	-2.14369156016342	0.71398647072507	-3.00242602354419	0.00267837060969023	0.0407119808934212	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98460554218019	1.72220530150145
Merged-chr9-64222283-2	4.39718045347624	0	1.32186493474169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120098151-4	6.05242646848053	0	1.30095846749548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32093864-3	8.37783023236122	0	1.29143871237436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31011749-2	8.51700899251002	-0.172288266468636	0.558464900356399	-0.308503303177488	0.757699387166833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38926864314369	2.76778958584463
Merged-chr19-29180564-3	4.30680052218258	0	1.32560689850487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75906098-4	9.07539386516261	-1.16179146987613	1.13239508806643	-1.02595947485068	0.30491068646958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816279004064202	0.423054662900563
Merged-chr16-11036257-4	8.18061493295057	0	1.29311258143739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112252413-2	7.19460814988038	-0.298863511569149	0.528126205031198	-0.565894115311877	0.571465762169735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05579336041796	3.92649120513858
Merged-chr8-125184080-2	8.32922281644058	-0.392478534717244	0.577268486189961	-0.679889070868302	0.49657470230889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31111353624748	2.93857203456399
Merged-chrX-94289146-3	4.18318717739652	0	1.30617332478351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3725884-5	17.0853974690186	-0.145153221301416	0.399020060025087	-0.363774245566224	0.71602659597989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18497396203396	4.06863864365779
Merged-chr16-85309722-1	3.15295766177461	-2.95802566765164	1.25062109632358	-2.36524529799414	0.018018132294992	0.172879580563622	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56406430581697	0
Merged-chr6-97421862-1	3.13073905484268	0	1.32010711347673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16103093-2	3.76776780726104	0	1.3367981303458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114995016-5	13.764391812458	0.568205693926374	0.45023984184596	1.26200669313662	0.206946377971485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79855783514355	4.3733725282078
Merged-chr17-23706449-2	4.39495306075383	0	1.3236441704692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134432755-3	10.292773415984	0.12060632355077	0.420517721602216	0.286804377925495	0.774262110609381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88095369590443	3.97746106440913
Merged-chr3-60582299-3	4.85961235206167	0	1.33747200834109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34242012-1	7.04269721366556	-1.87429102805063	0.836675479204852	-2.24016488427734	0.0250802204735933	0.223404046764917	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93534673354022	1.27256041875316
Merged-chr9-64018910-4	9.65253321364553	0	1.29005164482466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56462204-3	5.20861698614475	0	1.30995554791144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117755619-3	5.23280286252879	0	1.31632081288363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103099338-4	5.76645003622436	0	1.30172630501476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46907270-4	9.71704351103362	0.876474738349834	0.647669641790077	1.35327438835541	0.175967988147837	0.929196295233017	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00738730684247	2.33184672666836
Merged-chr2-59211863-4	5.99097392710914	0	1.30283994924821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19841279-8	18.4586647303814	-0.218876645971708	0.482478710259741	-0.45365037113011	0.650080492643943	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.73247920310574	4.28906359933662
Merged-chr14-79562741-7	12.950060044659	0	1.28440911663911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66886553-2	2.87612983431698	0	1.34119087076257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94698167-1	3.43891732415901	0	1.34525216607474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80636475-2	3.97751248136444	0	1.35559655060441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55778679-3	4.99500400480901	0	1.36263893798571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157201109-2	3.07440239647781	0	1.32887253792659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71352172-1	2.33859223261576	0	1.52407088977174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98140958-1	1.95738703879476	0	1.37266989851503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149683013-2	2.68530987253109	0	1.36477118919377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85914525-2	3.48176627932606	0	1.34235667454707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-85698183-2	4.04409757263524	0	1.42378489077294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81550392-3	4.98516999669675	0	1.30072148433946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30220235-1	4.4049627691299	-2.38656838528339	0.999482890261664	-2.38780314154111	0.0169494179926843	0.164695415338282	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0813485329224	1.0023426291647
Merged-chr1-120535106-2	4.79290146849164	0	1.3118853974956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17130543-1	2.84062419588618	1.78070480742857	1.18839058594641	1.49841712689978	0.134024909345056	0.765893460958641	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.03956264035389
Merged-chr15-31466491-4	6.47309155246096	0	1.30381995439367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76949066-3	6.17900098024371	0	1.29997140120919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104995809-3	6.62183975754618	0	1.30771118310173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37777504-4	8.09907679046885	0	1.3034720107583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81907868-2	4.45224736089054	0	1.30479707295596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-56042504-2	3.75344335403983	0	1.33225605811542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85305170-5	13.4268398604445	-2.06451754036061	0.679955236947441	-3.03625507706795	0.00239536627400267	0.0372773528318595	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70399040882158	1.26857811924232
Merged-chr5-148497389-1	9.93447480588929	-0.331766434127671	0.600557694803844	-0.552430577441912	0.580653385830866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34233295370831	3.92284377699879
Merged-chr16-90712490-3	6.66770201442792	0	1.30097648662892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85801540-2	3.68940406604722	0	1.40589049368365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150882806-4	5.8221411823674	0	1.29886262626589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3809003-2	5.63147275876268	-1.13523610015112	0.800905898143013	-1.41744005479705	0.156354308850641	0.853764784070242	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03393501262871	1.91160626283417
Merged-chr1-52127011-1	2.76096869372205	0	1.42647668998377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78540617-1	3.61256775994365	0	1.33239992010485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118149219-3	4.21210843724134	-2.35578274874618	1.02751921123714	-2.29268973561068	0.0218658739047125	0.200991334389836	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08305296058752	0.683637474991079
Merged-chr19-46553750-5	16.3769158876853	-0.53327129531196	0.457716354288593	-1.16506934986144	0.243990922318747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.78613351750695	4.29773833858833
Merged-chr4-45441942-3	8.22808711813022	-3.25214472683807	0.907629719244785	-3.58311837733134	0.000339516649050464	0.00823535818442897	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86844562728489	0.683637474991079
Merged-chr1-9902083-3	14.6708761428824	0.181737586128581	0.437075613118417	0.415803537589141	0.677553770027574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89284882615606	4.98742715792758
Merged-chr7-112056087-2	3.71313179438795	0	1.46412256168956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28321914-2	3.66882532053442	2.46268163596515	1.22643112053585	2.00800647890374	0.0446426031960505	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr13-22015885-3	7.08579988000865	-3.09650873626378	1.04447666334477	-2.96465095385444	0.00303026532915591	0.0446584840322558	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66147940844558	0.306240821987646
Merged-chr2-148558559-4	4.38640819418175	0	1.32955140524529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55315432-2	4.01142928026366	0	1.33106056193399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143751417-4	4.32551288450976	0	1.31422677916345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54611779-3	5.07606385794976	0	1.33404881798958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16847385-6	10.7287808524145	-2.07802794014467	0.704044103961969	-2.95155932483588	0.00316173803696968	0.0461485221719501	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0408094318877	1.2972429702454
Merged-chr14-30870326-5	12.0278011333907	0.317205236763656	0.440164845365332	0.720651001786341	0.471124266068382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88844028957345	4.21229815858621
Merged-chr19-58194116-6	17.0058616759618	0.64644447015839	0.36768928758403	1.75812701644362	0.0787258998519471	0.519376340406394	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47389796443723	5.09263798643469
Merged-chr8-94364160-1	2.9644214453142	0	1.31892971563037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22255552-2	2.44588513618052	0	1.38151171622935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38849992-1	1.73027335121796	0	1.41736537786643	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64140581-3	3.80714948199283	0	1.37917934269081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-93467574-1	6.33089041381567	1.26145347262088	0.70320929808599	1.79385209503675	0.0728367793729485	0.490174272389773	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19029891291181	3.16010405895335
Merged-chr15-80040409-2	6.152967885629	0.0595692548945135	0.867875830069733	0.0686379927065455	0.945277776357851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72953235051464	2.4398829863299
Merged-chr8-84558074-1	5.17010374604226	-0.432807809592979	1.08611744687439	-0.398490799350021	0.690268439016525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22877521336941	2.24687133350373
Merged-chr10-69240763-2	3.35726046435108	0	1.34020242804197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128705049-2	2.36130277384983	0	1.45449212715885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88241743-1	2.31882921136617	0	1.41056523663583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83219467-1	1.95798111430181	0	1.44596414941687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116618856-1	2.60185170462028	0	1.41825205413653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84758924-3	3.5363162832734	0	1.35269398186806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56003936-3	6.55288506748403	1.40452964802136	1.16707739993228	1.20345886922569	0.228798798759479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.73596151290311
Merged-chr7-68094011-1	1.87963789626663	0	1.41816420444928	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152481096-1	1.91497398629506	0	1.46475654877016	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24312870-2	3.30617572457291	0	1.381369369658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79690607-1	2.96936976035467	2.75145327208331	1.40241696610674	1.96193666974926	0.0497698578963885	0.36949115361252	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr8-84973837-1	6.35670244986263	2.08952381225897	0.754324220575812	2.77006061221783	0.00560458619250585	0.0710590190368315	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82611895909242	3.85976690535841
Merged-chr18-76254824-1	3.52384335857929	0	1.34530010783946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88301938-1	2.32272731982215	0	1.37437137644648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84203757-3	3.6166069496548	0	1.33501133252433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48285785-2	3.4808686547313	0	2.33543443945761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95799941-1	3.72807773796419	1.07417204249441	0.903135395760905	1.18938095831069	0.234289790433747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93941995475172	3.39633142321475
Merged-chr8-46078715-1	3.01223788930197	0	1.39855163246973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71098161-2	4.91006437275648	0	1.34518275880265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46129738-5	9.65689952865227	0.061803883150579	0.613763627161053	0.100696555506965	0.919791345784037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18828917978252	3.37607108961431
Merged-chr3-41587105-3	9.87811100457841	-0.402044465238703	0.752846834757025	-0.5340322183442	0.59331924362563	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99206106201259	1.62306943957144
Merged-chr11-95852272-7	20.7516557993481	-0.0781265484606387	0.376304878499565	-0.207615029526462	0.835529568201723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56159332104857	4.34899684351331
Merged-chr2-173586804-2	7.09686635935857	0.854767208220804	0.631286157477297	1.35400910996776	0.175733471320823	0.928603623076543	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08465580985679	2.55248074938811
Merged-chr9-78006813-4	10.4283153143686	-1.76601338357479	0.597355624195487	-2.95638529553186	0.00311267984846288	0.0456263886272795	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90578029107838	2.01243752527112
Merged-chr5-21129761-3	4.45099563590074	0	1.31001267915006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173492260-2	3.75765479933398	1.82723477578025	1.26704430455666	1.44212382251274	0.149267445690092	0.826612754751252	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.887107926668329
Merged-chrX-78538798-2	4.11759606273544	0	1.35350456285478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127937115-3	7.42137176511753	0	1.29020720229558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117832374-3	7.34062050315584	2.71481963162801	0.667960173583772	4.0643435626743	4.81678321629173e-05	0.00176532538447448	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0929074641484	3.52994528734705
Merged-chr5-74957861-4	4.7692320732933	0	1.30967868383183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101802885-2	3.32733019560624	0	1.36461904952823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119366379-2	4.56470350794137	0	1.39467661943744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159061520-2	4.79376130058006	0	1.32172335534422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19291190-3	6.47279281587542	0.243051533068731	0.580689895628151	0.418556504768892	0.675540282904584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18679375879261	3.75601476634631
Merged-chr3-54709464-1	7.98419125462577	-0.746053403766542	0.551580601757386	-1.35257367896831	0.176191865905002	0.930152986704495	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61288474537685	2.6879818684187
Merged-chr13-19843548-6	18.0826237140429	0.907363863880084	0.411145626094152	2.20691600808201	0.0273199278325564	0.238467545179811	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00257275951815	4.87465453973739
Merged-chr1-180794305-4	7.66575134529718	0	1.30492699432648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115033733-3	3.82196258660372	0	1.44499784681316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124618473-4	15.384617106939	0	1.282081177963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105663421-2	7.22352374480943	1.40527237262426	0.529522289387598	2.65384932945784	0.00795793516890195	0.0926950501866429	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88100459820041	4.64663752061096
Merged-chr1-166146854-4	4.62521791624261	0	1.3477357496805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142752192-2	3.43813201045996	0	1.32969099393839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70675265-1	2.69846436803867	0	1.34923517433089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42089308-2	3.39070454898017	0	1.33495017052315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119378794-3	5.69205796520021	0	1.32488137954831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118360756-1	3.68948793185395	0	1.3540931829706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31007934-3	4.80039988472958	0	1.31080601042334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15750242-1	2.3692130769288	0	1.39440785208808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98457891-3	6.35426002553298	0	1.30311344821116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-73085981-3	9.37213759550528	1.12790781999731	0.623447000377095	1.80914788156024	0.070428032043863	0.47780213682914	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66278468355781	2.57664716838396
Merged-chr11-30268281-2	4.75327657593953	0	1.31291382751653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3240977-2	5.72032729122829	0	1.34278358112684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115007185-2	3.70851945319535	0	1.32797261827434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85343143-2	8.33712255687233	0.572801790270178	0.59121866715725	0.968849297374817	0.332620386053728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1596706007767	3.041117377083
Merged-chr5-140411553-2	6.18922412684687	-0.321356689085824	0.758656790176477	-0.423586387477097	0.671867484556712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25515906231626	1.98733255708278
Merged-chr14-109484990-2	4.71395229437771	0	1.39691891784279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191609233-2	6.45375894171163	-1.15643814267277	0.841419229111319	-1.37438996241406	0.169320650649402	0.903439800549996	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95749330410263	1.63820361928913
Merged-chrX-167172414-3	4.337259274158	0	1.31246940247358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-138919253-3	5.50563827617094	0	1.31175875053475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46522047-4	7.95639475328613	0	1.31066994647918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48097129-3	5.23291995597231	0	1.31120261277145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103310130-7	18.8145401232151	0.0768243308718052	0.382670555385581	0.200758406390574	0.840887487604184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52192261550776	3.72223980548185
Merged-chr16-55888401-2	3.21116323649063	0	1.35914694618396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77083102-1	2.38818584774319	0	1.35484244644259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4803604-4	8.84328073646258	0.251222560678884	0.687990874589808	0.365153914037983	0.71499651772158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22331155351701	2.61518326673776
Merged-chr13-119444427-1	2.5721822449621	0	1.38885582557321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15171349-2	3.73237003089185	0	1.35816775983243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114959510-1	3.23300763476906	-0.361528004511195	1.0747890534716	-0.336371126355864	0.736591020078004	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28875647486945	0.581381506691384
Merged-chr4-118083809-4	4.80665933383121	0	1.33129326043985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8289033-2	3.54171076406253	0	1.35830305592613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95768940-2	3.53587064976406	0	1.31927856307851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114922387-1	3.0503574576938	0	1.33426218992519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53724368-2	2.29311511907968	0	1.45947781181017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86695251-3	4.8557032750991	0	1.31517386148506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44226049-2	2.99366791721755	0	1.37989977959292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114072134-2	4.41638649931017	-0.780849741189054	1.1090887633485	-0.70404621072127	0.481403996040325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38221202918532	0.73596151290311
Merged-chr13-8679376-1	2.34397246756756	0	1.36292255979784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64371393-2	3.27715426842995	2.86698769733412	1.10949817132005	2.58404003850052	0.00976504575353254	0.108984915424481	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.58756080918295
Merged-chr6-72038900-1	3.93274716980258	0	1.34959103553445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184067108-2	3.45812413996014	0	1.33748357650115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22777738-3	4.89406012921662	0	1.34931526262838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100148605-2	4.00342188570123	0	1.35016432933458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108316408-4	6.11781155880933	0	1.30527573738432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110783827-3	4.14993778509747	0	1.33265413810302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68707227-3	5.71390834959141	0	1.2955308224894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100617026-9	20.8550355100574	-1.87871872395874	0.455677593451457	-4.12291223215232	3.74112272432607e-05	0.00144998461176638	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04128504646612	2.62703785442709
Merged-chr2-148585326-2	3.77932153299945	0	1.32068268598949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-161512126-1	1.65462125489007	0	1.51519439065288	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4310058-4	4.90522173029063	0	1.33063495785732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117198547-3	4.45289165287809	0	1.30943051816145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-78791676-3	3.62222801351079	0	1.32898643465663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67305155-3	3.86703179227534	0	1.32697749706871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78897375-1	2.50508418951134	0	1.37385991526408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141176363-3	3.60377468507698	0	1.31717651957044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3026954-5	14.0828209179664	0	1.32496169228445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56251280-3	4.40124339735023	0	1.33406957398954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108929204-1	3.84381692815136	-1.73208488735986	1.17526719386446	-1.47377966168229	0.140540926039004	0.791637561670955	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67951262924126	0.581381506691384
Merged-chr11-57951714-3	14.954032045513	-0.225116601270823	0.342135970808365	-0.657974081880195	0.5105547856055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.41404242377263	4.14460884680577
Merged-chr1-74784626-4	5.41205269871127	0	1.29916505602548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60771190-3	5.14443461613517	0	1.30070578869945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127480021-3	6.41366664441226	0.523648235147684	0.761818770754684	0.687365887071724	0.491852188701546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.314238126284	1.47158896970822
Merged-chr11-76605866-7	16.1393881058562	0.490429030462922	0.483113574536544	1.01514231086012	0.310037995255088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84720863087318	4.31333715233632
Merged-chr9-22394933-2	3.80067665882989	0	1.31370323272628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50601826-3	4.92843644233738	0	1.30978356466399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12275410-4	5.06844849360791	0	1.32944093509168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100022217-4	4.96326970683078	0	1.30806710473469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143041688-4	6.45886981037633	0	1.29659906649065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126673253-5	12.7402954809861	-1.10577402107234	0.551429986729568	-2.00528452874042	0.0449326378368541	0.343378464598912	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51976909116032	2.58707500045288
Merged-chr17-50098310-2	8.72460333477372	-1.61729800651326	0.687279268287868	-2.35318898901495	0.0186131712676452	0.177276824027917	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47245861332653	1.50871668602081
Merged-chr18-50111785-2	5.84831112515611	-0.454379830284007	0.632417207365425	-0.718481130797973	0.472460678326957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55742891217782	2.52983342263343
Merged-chr5-136971001-4	14.1784606208556	-0.340393089444703	0.452807295420491	-0.751739410754421	0.452207784938051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34734996290805	3.75030659231378
Merged-chr13-5873887-4	5.7464678864712	0	1.35014209387566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67382152-4	6.02736145087801	1.20663103652011	0.921182488030557	1.30987187902348	0.190239181724197	0.982639282977583	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	1.31734301959449
Merged-chr11-58094512-3	9.56716012566648	0.186110368194576	0.525873185949997	0.353907316758061	0.723408343491576	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98874974102937	3.84725565286587
Merged-chr11-85572198-1	1.71062245352103	0	1.50349790012997	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34312353-2	3.36430743382414	0	1.3780511492248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125328802-1	3.86032455563426	-0.589723919779552	0.956461537819919	-0.616568357911936	0.537519470716817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69859676491855	1.15307255889252
Merged-chr12-117557078-2	2.80006448834991	-3.31726279386797	1.17932146331967	-2.81285713611131	0.00491034619013064	0.0642128241225289	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31185254929769	0
Merged-chr12-105967220-1	1.91262404260639	0	1.38054123110105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50705127-1	2.49478307184704	0	1.35279308563766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102682805-1	4.12243837389946	0	1.31676509065423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70265401-1	1.9987946706238	0	1.3904554510778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45079839-3	5.38391340218163	3.02049124379138	1.11561159952324	2.70747565289049	0.00677970434685625	0.0821179907784372	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.31495854024319
Merged-chr7-34234656-1	15.6511815894238	1.81322555474145	0.384887232150298	4.71105665057081	2.46435715133519e-06	0.000164826901137308	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40831281870642	5.13708587313261
Merged-chr14-47367346-1	7.43458862208071	0.750372185033402	0.693481464221345	1.08203639714572	0.279236355364674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10266171064321	2.72587442728265
Merged-chr6-139881019-1	3.38439866026784	-0.0656834244740512	1.056418279881	-0.0621755849221485	0.950423005273172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20633254178167	1.85985322339692
Merged-chr6-90435394-1	2.33543215746208	0	1.38048271723114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143614889-3	4.12085567257674	0	1.32850118020611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28887182-1	1.7641735567708	0	2.09159599640476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73933819-2	2.42126732683625	0	1.35201988594553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141645767-1	6.50836181138493	2.00035391140983	0.859369797226196	2.3276986436647	0.0199281112230449	0.186752094648085	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46059161465834	2.9293679972682
Merged-chr8-10602638-1	2.36487093946402	0	1.45966908735641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58740597-1	1.33925274303414	0	1.67235174768966	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119991477-3	6.89744478701358	-1.07016107241545	0.847169237508837	-1.26321993886645	0.20651014913517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7320175460147	1.76628008406346
Merged-chr10-44495601-1	2.78111880956631	0	1.38615219458515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17023287-1	5.78403775770157	1.03345724909514	0.863207854586318	1.19722873651377	0.231217412090888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56037038642775	3.50519934364198
Merged-chr2-170176540-1	2.95617202101099	0	1.38600872711128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75623124-1	2.05326097412898	3.6368618256071	1.22231878778675	2.97537914163323	0.00292626631814694	0.0436574883163539	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.72583980988184
Merged-chr11-32568208-1	3.59595019247153	4.40315231705913	1.09894479562953	4.00670928564413	6.15705695278543e-05	0.00215877225413477	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.60045726294831
Merged-chr6-129545303-1	2.56564714834802	0.817189254137881	1.00526093256017	0.812912575898766	0.416268183707656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28923906625395	1.67667850730958
Merged-chr17-69349445-1	6.02718033304877	0.221053465236503	0.631921149991998	0.349811784649561	0.726479954287332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87788412185438	2.49772695277398
Merged-chr5-41337171-2	5.50196243193012	0.0781208302537651	0.924237803743951	0.0845245995536096	0.932639345207028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13388733767844	1.21653520045322
Merged-chr13-51739864-1	1.57991473113695	0	1.47053128567009	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53444067-2	4.20578614589745	0	1.35884198041977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75203793-1	1.75769461178166	0	1.46471105514988	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100728790-1	2.99009920986025	0	1.37401854563767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56324747-1	3.14611493567593	0	1.31343148314428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63006234-2	3.1989646351727	0	1.32418067736195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87246626-2	6.96346690057065	0.438836941720417	0.665106693954022	0.659799315973736	0.509382622351077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52200273526696	3.27141366690161
Merged-chr2-146834952-1	4.52076348386126	-1.93882590926774	0.95115704755605	-2.03838673565996	0.041511271769937	0.324431638913357	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57684622040477	0.581381506691384
Merged-chr14-47358165-6	25.2189371646349	-0.202206194413328	0.399119513001847	-0.506630690372667	0.612413970149141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.92634612196001	5.72241214834908
Merged-chr5-99364331-1	3.32972032917059	0	1.35106777191023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95805852-1	3.26994086088812	0	1.33447626285069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104460204-4	5.64134110378909	0	1.2987557298924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122454191-4	5.76111981540691	0	1.33679147240078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107754849-3	4.21560774449567	0	1.33575781072807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99191177-4	5.00215755739396	0	1.33775977380751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17004362-2	4.20038883088195	0	1.32414080845487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112552205-3	4.90365447530477	0	1.30520840441899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118797477-3	5.48235776396266	0	1.33352068624091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134172088-2	3.92670126846637	0	1.3177885472103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90538130-2	3.96067189038735	0	1.3231417120957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7941754-2	6.70717755897782	0	1.30699743437535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27621011-3	4.94761136067768	0	1.32139005589868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129342253-3	9.94081768259637	1.70063216306331	0.531591481007693	3.19913359002588	0.00137841280309845	0.0243048470132949	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93434565041513	3.81857334141334
Merged-chr11-58643492-1	6.98504866153371	-0.492247323436109	0.584929080415933	-0.841550437338627	0.40003964168037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16463706168286	2.55980173949489
Merged-chr5-44238411-1	4.97853883702947	0.870150496652301	0.908780079141688	0.957492925542699	0.338318515451498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12455912616735	2.09295338928517
Merged-chr16-57130947-4	5.13876974150054	0	1.33798200751145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128180236-1	3.53724767877627	0	1.31515816829666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22695290-2	6.09477576630907	0	1.31757912780774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26699875-2	10.2078342571016	0.887300761383649	0.672863118667548	1.31869430314556	0.187271332093611	0.972305138009624	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22185685101884	2.72336792166748
Merged-chr2-51284875-2	4.24313042344574	0	1.32183356768675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132343820-2	3.59063794027545	0	1.34404322757561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93294683-2	4.72851475295331	0	1.3185953207532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31178396-3	3.62521905875948	0	1.34677825771801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77832011-1	3.26028076483648	0.874457337787078	1.15019925753907	0.760265955707573	0.447095627298066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.963545719069792
Merged-chr3-79910941-3	3.97977175828441	0	1.34128183983146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120364465-3	9.18642347863985	0	1.29518625395593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60764065-3	5.02678825573399	-0.8631245108778	1.24942615877929	-0.690816744001169	0.489680711765439	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0
Merged-chr9-62366851-3	3.69667437020836	0	1.3475452101702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122898629-4	8.40252750572692	0	1.29431666966794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74166912-1	3.13353437185539	0	1.31881042901956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-58212453-2	3.73823566174261	0	1.33322140308154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93729078-5	12.3868921528692	1.26127353758803	0.643541129181517	1.9598957710631	0.050007974015873	0.37066935912446	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55967271621327	3.72248972571407
Merged-chr6-55056236-4	10.3675464260289	0.898535057804968	0.572569215552202	1.56930382109069	0.116577162390086	0.695122844560868	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32948289859194	2.95796517222081
Merged-chr15-51449890-6	16.5534789455347	0.393033215425107	0.492026782624449	0.798804514926373	0.424403772180025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94415020050452	3.86637744379062
Merged-chr8-90841531-10	28.148344216672	0.216962177866201	0.317003015004108	0.684416764501087	0.493712032848928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58231105939663	4.78957558155537
Merged-chr17-31558176-3	7.08238728526567	0	1.29900113787337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105937320-4	6.81001220200401	0	1.32271204643599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8648783-2	2.85343711128459	0	1.34773934285752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40431240-1	5.244614596006	0	1.34493061568702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28755697-2	3.04780743949473	0	1.34985869010803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35728790-2	3.47848149998	0	1.33395174661736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43039650-1	2.61630494559089	0	1.32432736801689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89795781-2	3.80107650571493	0	1.34044467366446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154910787-2	2.99144403492484	0	1.35466912853163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129339420-2	2.61414998327096	0	1.35624376907143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131980744-1	1.6239383229386	0	1.40951693047888	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87540228-1	7.56646772748114	-1.07274123297599	0.695813564334157	-1.54170784813965	0.123144603944219	0.722806726788729	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94787823029313	2.44252268086676
Merged-chr7-98489928-3	4.47965324727331	0	1.31248115715673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96475625-4	6.83115924004632	0	1.31786524461913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53933507-3	3.71516018522253	0	1.33318248492982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57680147-4	5.78705176721893	0	1.29881039560611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88655543-6	15.7751940319449	-2.45149269471383	0.524916074178969	-4.67025647585333	3.00823911946759e-06	0.000193671323646039	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.10920473482059	2.57883501591671
Merged-chr4-118992018-5	10.4162120710889	0.659360556688795	0.576016838024458	1.14468972634581	0.252337708725301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69454897599333	3.69013312374748
Merged-chr11-16980763-3	3.22481690142248	0	1.35480840333158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119483396-3	6.59762026754453	-2.99105774601002	1.11785895205739	-2.67570227934843	0.00745728569996785	0.0881041025764056	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61108507365985	0.306240821987646
Merged-chr9-96612110-3	3.69055540936431	0	1.36508200918925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4055203-1	3.69298645008267	0	1.32587180980521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64970897-3	3.22531797198578	0	1.36123550717422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94861491-1	4.51551596361102	3.65743845475288	1.09793196524942	3.33120682384177	0.00086470330580314	0.0169837397718702	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.22548804685604
Merged-chr11-18878234-3	5.94030016859288	-0.93448165968145	0.882021828547936	-1.05947679460482	0.289382692011567	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08734712471696	1.19380919831911
Merged-chr17-26647302-3	8.58288540348509	0	1.32292236485096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33929890-4	5.69209179644912	0	1.30390122082723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43388153-3	5.9236004780695	0	1.31381998712721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167786071-4	6.34897438932724	0	1.32583659261009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59534044-2	3.19359873908453	0	1.34329939608799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84293181-3	5.97430671058715	0	1.31054718559975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88721151-4	5.61786564398045	0	1.3028093093583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34187944-1	2.92199130788517	0	1.33268829233618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21728104-4	5.67548820299451	0	1.29864560523272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61799436-6	12.6412127018351	-0.132583078687689	0.470863035096717	-0.281574616831955	0.778269705813101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72789429923627	3.01405708810591
Merged-chr11-104545966-3	4.36644823281598	0	1.3370342076977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45345201-4	5.62058963477039	0	1.30376098202884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148082510-2	5.05007082998909	3.60859845871047	1.12012200004109	3.22161198385362	0.00127471637154246	0.0229659818072274	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.887107926668329
Merged-chr11-44416591-3	12.0604987319651	-0.0411886605459212	0.563309493443455	-0.0731190598158377	0.941711374715155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38307074173054	2.66194126857047
Merged-chr2-164794498-4	5.12798558265984	0	1.3135320471839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124900046-2	4.0753750041265	0	1.32569430381239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127780793-4	6.41929440070983	0	1.32327577235318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160356341-4	10.156156321157	-0.822270528840214	0.583974923542227	-1.40805794168789	0.159113913563803	0.864249556431963	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66152960787021	2.48799367707272
Merged-chr1-35971618-4	6.71346526669848	0	1.34159339254554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98531730-1	2.51956649063903	0	1.35535824919983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21984948-1	3.74449005870658	0	1.32160658553887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17652341-1	1.63030739726075	0	2.41226772679	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28733478-1	2.84580539478882	-2.02300316941849	1.33580478829508	-1.51444521470872	0.12991295893088	0.749738780738081	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13523933869783	0.306240821987646
Merged-chr7-126213022-1	2.66705035954801	0	1.38529446681444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49800456-1	2.65951712837025	0	1.34606665413767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157597391-3	3.75804713093404	0	1.31174994738343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-5333593-1	3.0901549591689	0	1.3319009373531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138327549-1	2.90561346235988	0	1.3463283467826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40797571-1	2.12576196431381	0	1.36653121675809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79695393-1	2.14413453207088	0	1.59478847706295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52961628-2	2.5091059541449	0	1.36531901099301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60900712-1	2.92248176616379	0	1.34863095251224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55519842-4	6.06177141492845	0	1.30707068498987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40789756-1	1.36329369983574	0	1.74216055918031	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116331001-1	2.61010211475314	0	1.38366013853144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-6263454-1	0.994553405031433	0	2.33543080092082	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84349098-1	2.12903495248933	0	1.42534045205381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74323063-3	4.1953499664078	0	1.33467808555397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29993528-1	3.7295280338396	0.789343314136614	0.89218946756196	0.884726106769239	0.376304371616126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24127897945205	2.61944793579884
Merged-chr11-117150609-3	4.49054270938222	0	1.31853193295342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128452088-1	2.83970705451605	-0.846076310226408	1.19278082514532	-0.70933091175684	0.478119150100444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.975938886140744	0.609949614787909
Merged-chr4-139235093-1	2.43386321502465	-1.47989768137599	1.00729514256019	-1.46917980525014	0.141784026293148	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26605912405225	1.42539729206526
Merged-chr6-122616112-1	2.97155359555244	-3.80967138261664	1.13317639631425	-3.36194029015068	0.000773968577921368	0.0155378650362057	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53829952704302	0
Merged-chr3-98050856-1	2.13505806291712	0	1.42669407756585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16536637-1	2.13134803415742	0	1.35993860009083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100952356-1	2.00158388198968	0	1.35007227203101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99165121-2	3.35208711029141	0	1.36634170888876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91543121-2	5.55323294753694	-0.246014465626618	0.670665197267808	-0.366821577485822	0.71375211142536	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24417741261372	2.83412113653556
Merged-chr6-84096021-2	2.73740221173474	0	1.39660762286365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124505764-1	1.648509389396	0	1.5070589418343	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5180344-1	5.72936358920348	2.57071265992339	0.799522002631825	3.21531196322459	0.00130302831011155	0.02332813368563	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	3.14434077738954
Merged-chr12-117828559-2	8.28994350660921	1.1955851860474	0.692249217333991	1.72710225755382	0.0841493002452917	0.544778770632153	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30683609924059	3.78747426955971
Merged-chr2-118573491-3	9.81087266049503	-0.623156715667495	0.511515784461871	-1.21825510491934	0.223127044962576	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54423766912351	4.0134657775943
Merged-chr1-53777995-5	13.9038297660144	0.501160286051284	0.65331134858753	0.767107883759865	0.443017374953867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11315184376425	3.92837697909323
Merged-chr15-50697254-5	13.1947597320904	1.02725428081877	0.503760855889386	2.03917050880255	0.0414330131319878	0.32408092252406	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05773306010788	4.57992929312206
Merged-chr4-86885088-3	10.5462455549724	-1.63797774685783	0.526789924483172	-3.10935663483851	0.00187495251972573	0.0309083368703324	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46959173333994	2.4707788411593
Merged-chr5-27995370-7	15.6538063721407	0.288970114219054	0.427602669913834	0.675791183149733	0.499173233348548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04931743861381	4.27581549285658
Merged-chr3-137992529-6	12.8817187932815	-0.899064625375841	0.517720729095664	-1.73658224376353	0.0824609359210436	0.536809356315652	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29180008717277	3.44492596100568
Merged-chr15-100457556-2	8.1786233038291	1.40647551901433	0.651585993976581	2.1585416691214	0.0308857423306753	0.262384258754591	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73098256022082	2.56160744912966
Merged-chr14-50363790-3	4.44336038151544	0	1.31816690500725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107928034-4	10.5800634072419	-1.10588739030717	0.456658057428659	-2.42169687431812	0.015448230614683	0.153253389668602	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23460670360096	3.21017871366514
Merged-chr7-102258310-2	6.66504974011683	1.82210713569581	0.810873486930064	2.24709176593533	0.0246341630504921	0.220200825857359	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00973535428425	1.71491581301229
Merged-chr3-15245110-4	5.03818517303113	0	1.33634587637441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41274665-5	13.0300912025733	0.336461409525757	0.50935051381461	0.660569490753905	0.508888440096019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11793879922147	3.19164559402981
Merged-chr13-24447490-3	5.48978993627152	0	1.30649522287469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54195935-3	8.85740603212697	0.59336107204605	0.448446095287458	1.32314915500758	0.185785780770979	0.966896912253931	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67807452103718	4.2386195245634
Merged-chr6-97788742-2	4.92614108707919	0	1.30194562899911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34236233-2	2.95125179787394	0	1.3534702127232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93674946-4	7.8983980404512	-2.4514590567525	1.09580534865706	-2.23713003386671	0.0252778425255414	0.224446377048568	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33253094599557	0
Merged-chr8-124837116-2	7.02317749772906	0.190153076595835	0.498368041890229	0.381551505338535	0.702794060599741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32377562919342	3.55385461856295
Merged-chr9-40229028-3	4.67500362985588	0	1.30003744469762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50837417-7	27.7139536052049	-0.824885237140164	0.355129363992065	-2.32277395444719	0.0201912989651431	0.18856947580052	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97078100244755	4.21019714014026
Merged-chr7-80144058-4	10.3452630140223	-0.83731464966486	0.525960602607551	-1.5919721848247	0.111390954546204	0.67304237778791	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06346340590284	2.5779073721314
Merged-chr1-162608453-1	3.76962868542235	-1.73952599750026	0.924988930510218	-1.88059115101058	0.0600275564038023	0.423877317999013	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00020325639316	1.68807364458303
Merged-chr2-79265843-3	3.48521620459217	0	1.35282353952349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106441016-3	7.35968525292879	-1.00190402627303	0.849352217411818	-1.179609596271	0.238155524484176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7595664807717	1.40000983364339
Merged-chr4-137603936-3	9.83067808493189	0.633684278334336	0.61764630967887	1.0259662664605	0.304907485042281	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68703695440876	3.52983240776257
Merged-chr13-39011943-1	3.65862896393469	0	1.34284652811146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31929057-3	4.81163713911764	0	1.32769454016883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86296881-1	3.49329759295536	0	1.39017885136831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41170180-6	11.3053346629916	-0.0178357543622426	0.576979541746408	-0.0309122821032045	0.975339494902996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98887658337765	2.4206808573228
Merged-chr4-140902662-6	17.9006653044157	0.746244502106814	0.408706297014189	1.82586984237463	0.0678698698039763	0.464789825215955	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12267696636112	4.46461706190247
Merged-chr12-40257414-4	5.17396856864487	0	1.3177563729194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45561430-3	4.3358033361977	0	1.29951546062137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130476885-4	7.31906430985445	-1.02462183948743	0.698514378843764	-1.46685862241443	0.142414518552474	0.798954252174617	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13914927595382	2.30219722357347
Merged-chr8-69092973-8	25.0151553472921	-0.756810427448036	0.459376751114156	-1.64747220143922	0.0994610254644729	0.618223168458237	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.954168306916	4.0373403746515
Merged-chr15-99835304-4	7.30401250661985	0	1.28972210430872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-69985932-3	6.73833571458972	1.62756816762361	0.699418501717272	2.32703047406877	0.0199636433709687	0.187058250605008	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44452193873182	2.43491183200938
Merged-chr19-29383009-3	4.77584919790649	0	1.32320935882193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42337230-2	3.7464623590886	0	1.37192656831912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98741558-1	2.65460660864258	0	1.37131668008737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16047248-2	4.58139030593173	0	1.32921078068557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80621091-2	3.81257158594403	0	1.33222308882691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161974566-3	8.80710948375921	-0.721219713973762	0.55868333353717	-1.29092756250224	0.196728796877223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43328001759072	1.90083588439961
Merged-chr9-66831533-1	2.87774179262986	0	1.37155776176641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101566822-4	4.2113521728391	0	1.34702996880614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12012614-1	2.90360675167966	0	1.35819899773341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129437887-2	2.97398725995482	0	1.40929680665928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118053726-3	10.6140410316751	-0.287893124217498	0.498974627219009	-0.576969466006808	0.563960082370534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08824044701847	3.75669766425857
Merged-chr10-77282973-2	4.06271063483319	0	1.33634923113902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89360465-1	1.78532227494771	0	1.42018821104947	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14068108-3	5.8506113173348	0	1.32949880540228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55949360-2	4.25199767090796	0	1.33297039034093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83639230-3	4.01450347492672	0	1.32000779633454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112593427-3	4.89267385247625	0	1.318687102392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119249165-4	6.20799492248064	2.39765874379827	1.21137084791795	1.97929374635295	0.0477829432872066	0.358981859283261	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr7-73422646-3	4.44776559864504	0	1.31505491919047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174108273-2	8.01541369808109	0.736731232794374	0.700795607335303	1.05127832578134	0.293130778638053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22692780653993	3.02299161507002
Merged-chr11-107510524-2	3.92777397918022	0	1.31565762947424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100754978-5	8.33206307249606	-0.0609077146891226	0.682026419829001	-0.0893040400170911	0.92884028343153	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42339019143993	1.62559269623071
Merged-chr17-34159132-2	6.49469494847869	-1.64692804962156	0.642116839744194	-2.5648417043192	0.0103222885047084	0.11365126615479	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10777624470357	2.21043983090998
Merged-chr4-120523306-2	4.07835228384664	0	1.38259181113626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96578777-2	4.23871152663091	0	1.31965408583932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29465968-2	3.34142127413245	0	1.34113512829386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111570800-1	2.67109177305686	0	1.33722151809887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93458232-3	12.7275008944907	-0.676463814803839	0.466951344053275	-1.44868158838978	0.147426524513181	0.818568584487922	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.61924203055625	4.17297567351573
Merged-chr6-22453304-3	4.79749629767423	0	1.32300930812151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93485751-1	5.55360331633342	-1.32964211132177	0.651338341674404	-2.04140003166963	0.0412110813178762	0.32297665145094	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76125793110882	2.23285743666231
Merged-chr9-44182481-3	3.75826162237803	0	1.3348912557332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56479667-4	14.2820791566755	0.0728910180913265	0.446549106562558	0.163231808148551	0.870335922779471	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22568873047358	4.3903598971393
Merged-chr7-30873253-4	4.55685159202948	0	1.3187877654919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75645764-3	7.55100684269592	0.233970749764465	0.636190308495071	0.367768491032079	0.713045865445136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73301309415809	3.32225367526298
Merged-chr6-86497508-5	12.2290867721913	0	1.28883932364872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78703931-2	6.26725030706602	-0.682065605981894	0.601038184124686	-1.13481243621021	0.256453914438547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5425699654973	2.44445968990951
Merged-chr9-96035573-1	2.84405528525121	0	1.33102570357165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135514292-2	4.94554111180089	0	1.35873450185626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4041951-5	14.8020785504419	0.639119501968527	0.451584979630827	1.41528069089235	0.156986214098531	0.856009775240535	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66619377136197	3.67893835981521
Merged-chr2-167776282-3	6.44370130691274	0	1.30053153885213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75727792-3	4.7426225145178	0	1.3056156569283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68219157-2	3.61030482189762	0	1.32916901035409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105226450-4	5.81421535298403	0	1.31635004178524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80371377-3	4.10480292114148	0	1.33333169166096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181228592-4	5.7730473131498	0	1.31176332774892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21167546-5	12.229925814751	0.975991431812631	0.415295957210059	2.35011060153174	0.0187678334470693	0.178437777452668	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25115084066078	4.09046067534216
Merged-chr16-49946921-4	7.0787032682955	0	1.30895630215205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121843446-4	11.2349142070984	4.37747275233182	0.991269661287617	4.41602615644028	1.00531924937186e-05	0.000508043617031993	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.34322728268548
Merged-chr4-99170980-3	9.80255385624989	-1.86257044246757	0.63957434624199	-2.91220317608369	0.00358889111660841	0.0505539294903844	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2322730019971	2.00075396150771
Merged-chr2-102754042-3	5.02939204658936	0	1.30072904620413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95328767-5	15.441803362825	-0.1645395229658	0.446021234509253	-0.368905133287745	0.712198437002132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.69694329092073	4.68560390007967
Merged-chr3-96082942-1	1.66813998325204	0	1.49454191185585	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6391022-1	2.24422283461686	0	1.43672233401866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103488893-1	2.22611939487582	0	1.41102971451694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75342203-1	2.19765371053348	0	1.35823466267579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24630755-2	3.7654682831885	0	1.32809663262557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189867646-3	5.17033996697835	-1.66324386301245	0.938087330439683	-1.7730160178508	0.076226052696487	0.507030500763908	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79170418090747	0.845523456341755
Merged-chr14-68048529-1	2.76602697507335	2.26303473631754	1.34221284340252	1.68604759479184	0.0917866325080065	0.580965641986458	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800023534112536	1.67800608098903
Merged-chr19-53783770-1	6.2497060394443	0.915978708751806	0.749812366684917	1.22161056478909	0.221854931518386	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57809507995997	2.70252588433993
Merged-chrX-48345464-1	2.45151332419364	0	1.41033461746608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149939467-1	3.06723546287789	0	1.3795601920605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116665129-1	2.75134540189663	0	1.40626854327684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118498650-1	1.55462232146093	0	1.79005920606822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42884384-1	1.6723784270502	0	1.46037692564461	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45254623-3	5.87748827126583	0	1.30602129567355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119138649-1	2.10491806983892	0	1.57039059315915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95459577-1	3.40326674470574	0	1.4087913614782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32519542-1	2.67926029426918	0	1.36686791788664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102678698-3	5.0773129918754	0	1.29725232908047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60719975-1	1.80547607260125	0	1.4346311325343	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4675157-1	1.66188796965811	0	1.51361614181687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184546467-1	1.62646970477772	0	1.92749379365599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19162191-2	2.22265786235345	0	1.58923165191448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13733836-1	2.23051313655829	0	1.40507973345329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19006288-2	4.98622298498999	0	1.31949846012121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82920301-1	1.11067842441751	0	2.01886057509741	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58982326-1	2.1775896186787	0	1.36352468854287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128283025-1	2.07759671818632	0	1.36619799015286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80729523-2	3.75650551478518	0	1.32413815136218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71867688-2	5.3001229658447	0.27123871614506	0.741288142235967	0.36590186823563	0.714438302242777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74349122269659	1.56763655772049
Merged-chr3-115768922-1	1.68412653855241	0	1.4017886655653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58999893-2	2.74939388561767	0	1.34295865212587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111247944-1	3.04228908038459	0	1.35185657223909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186554268-1	1.7250315505878	0	1.47207734749369	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22074717-1	3.3367126014854	1.68459531759821	1.21871824404779	1.38226807207142	0.16688940553658	0.893678201605618	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.7137797891573
Merged-chr5-100644091-5	9.21717365366541	-3.76253370313474	1.02688788131675	-3.66401607379976	0.000248291193135474	0.00644811902450547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31479972872689	0.420961122473315
Merged-chr1-161915096-2	6.05813423021444	-1.01505503771538	0.728138332847721	-1.39404147800533	0.163305079665191	0.880109998828996	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37456723498911	2.67223515518489
Merged-chr17-65766104-7	16.7182785229397	-0.188514002466052	0.457765750075144	-0.411813252597222	0.680476306980295	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49899025674191	3.28672907242738
Merged-chr12-32640892-7	17.1027255468802	0.629148142821475	0.466423121972044	1.34887854650393	0.177375980128051	0.934215426569486	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68910756041738	4.2682027206571
Merged-chr13-119325800-4	6.36604868459611	0	1.33643228138757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105242672-3	6.73506417919471	0.904230294239496	0.818717645464883	1.10444705723431	0.269399257483217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.953107588689112	1.354969417986
Merged-chr15-100681960-2	3.76553267234449	0	1.30730347838551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12148046-3	5.00240045613811	0	1.32144979873782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83862044-3	6.65039595023614	0	1.33471402338043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121629485-3	4.54007375683961	0	1.30124686906518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80581328-1	4.99106423347943	-2.14725893880954	0.820138051720723	-2.61816767836146	0.00884033529890037	0.100852051403971	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9682022949584	1.47158896970822
Merged-chr4-135891699-4	5.06918790849006	0	1.34919367988713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127290477-2	6.14169707827972	-1.49191375208534	0.871889392292135	-1.7111273118752	0.087057613330064	0.558279371998662	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50867216397854	1.63657599924846
Merged-chr2-118591162-1	4.67770068861595	0	1.35880340066916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8660303-7	14.6200132097315	0	1.2872636808523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9774947-3	4.49090864334035	0	1.35603516716495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68021228-2	5.07722727300673	-3.69496074129224	1.05575600059762	-3.4998245230912	0.000465564523463316	0.0104473830186243	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94829746545953	0.581381506691384
Merged-chr10-93951483-1	5.411585890674	0.793296712984656	0.705201622826041	1.12492184831563	0.260622152762952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2775965356749	3.13328750154096
Merged-chr8-57602053-1	2.7571943313225	0	1.46240147532134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106071438-1	3.00249427578743	0	1.32512853289366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77826372-1	5.33894795514847	-2.53602256171308	0.806833550612497	-3.14317935810663	0.00167123402088379	0.0281901028210305	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60180921728045	1.29835464915396
Merged-chr4-106980731-3	10.2650845549422	-0.363049545545118	0.570525804554404	-0.636342024579712	0.524553519526947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20753225117089	2.3898653101621
Merged-chr14-17899895-3	2.66913161211988	0	1.39292344852129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31803623-5	9.90643612832766	-0.706381473662483	0.740224195814765	-0.954280443217569	0.339941704693514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61410676888533	1.37038362634479
Merged-chr8-110971570-3	6.58120073233103	-1.45421322875078	0.702141283388547	-2.07111198722388	0.0383483318867425	0.306570846032673	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28006355835609	1.90927269178975
Merged-chr16-4909353-2	4.38084187087646	0	1.35512015316999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11588348-2	3.84669798643751	0	1.31621224904095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142441455-2	4.56114527369528	0	1.3132703204353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36839589-2	5.85121973593049	0	1.31522996473691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38402296-4	6.32094938858029	0	1.32893271010023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59025935-6	12.6149755472743	0	1.28340182980091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89285423-3	4.68083535986471	0	1.31206564080297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45547217-2	5.11955553341894	0	1.32221892780169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96689578-2	8.23372068940488	-1.0135065087027	0.633843938083013	-1.5989843048242	0.109824090060911	0.665914910375828	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21760426033336	2.035112151504
Merged-chr2-129622104-3	5.66865363844578	0.706274075915256	0.902203314894781	0.782832499343704	0.433725480189379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.923693841127943	1.88639437725876
Merged-chr8-105362155-2	3.27182669318207	0	1.32691496180144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12228509-4	4.30894095739688	0	1.32215820337933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85993089-1	2.4144553200793	0	1.41200819674365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16863116-1	5.43800967307719	0	1.32984588623334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3368424-1	2.61196950876653	0	1.37768708632097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86215439-2	2.85542272565111	0	1.34972336769311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127637095-2	2.74689568320712	0	1.3906418969588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43390561-2	2.92059691920209	0	1.35235661000527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165917773-2	3.77989851305607	0	1.32417654615016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36482673-2	4.68565905861807	0	1.35003038753861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153089541-2	7.37462123594257	0.167819503479364	0.753550564908823	0.222705033071894	0.82376508391163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36594795523392	2.93480637458641
Merged-chr15-100631660-3	3.80291782482155	0	1.35402884113525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-19301488-3	4.74317471517427	0	1.31729640865971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83198567-2	2.68748464443141	0	1.37808606938401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18608106-3	3.78519665798171	0	1.33309688628973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67998235-3	7.54141647921305	-0.696896372344567	0.594852402162045	-1.17154502497029	0.24137977082605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27782920013801	2.38225544844175
Merged-chr18-4790503-2	3.9362616405571	2.07065829311449	1.09974703014823	1.88284963391572	0.0597207484618402	0.422304082781886	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.20539659680455
Merged-chr3-37038038-2	6.70060958220648	0	1.29062036304319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59389416-4	5.08062762140336	0	1.3006881126413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8345056-4	13.5935056723345	0.0118404730255618	0.473833291673125	0.0249886895531392	0.980063985222031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29577716593003	4.26050096747292
Merged-chr1-58773500-4	8.49623440424935	-1.94997631274532	0.69544920774151	-2.80390902892524	0.0050487147924769	0.0656674595599514	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57241612158487	1.40000983364339
Merged-chr17-84169547-2	2.77944978166443	0	1.36834315352536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169102040-1	5.21017194452013	-3.20712314751161	1.0011588741805	-3.20341079744892	0.00135810105440303	0.0240309968862769	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88572735011834	0.73596151290311
Merged-chr5-140615881-2	4.26379478985073	0	1.33348716975137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99342648-7	17.115449526491	1.55167365626346	0.395234805802387	3.92595397339393	8.63866744929409e-05	0.00281828438912417	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41788655985355	4.94243417521286
Merged-chr16-38536926-4	5.0259154131671	0	1.3131105860838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27418281-2	3.6444782183494	0	1.32923508719669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91092144-1	2.57300847347388	0	1.38990355482749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173229707-3	4.7843498992741	0	1.32479762562624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13684085-3	7.76832209144321	-2.57441429421494	0.759340496188958	-3.39032924904655	0.000698087270552931	0.0142732198941026	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93704020009819	0.898163539755574
Merged-chr2-10351289-3	3.27972058282948	0	1.33144112831648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37042893-3	11.2783443124279	0.547494589339315	0.451337852260357	1.21304824445234	0.22511137583761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60863789435678	4.18813624938837
Merged-chr6-134527764-3	10.0586728538014	0.757922437930159	0.51394191268038	1.47472393130449	0.140286779442195	0.790614910688201	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00117537607983	4.38514391162204
Merged-chr13-98834486-2	4.67460487598719	0	1.33787145147195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-6343681-1	3.10942662224531	0	1.35029764075305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35205848-4	12.3460995948493	0.946262104877577	0.470046823581759	2.0131230707338	0.0441016837079107	0.339242922139745	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57787412212082	4.30848900412972
Merged-chr16-25036536-2	4.34454097146255	0	1.35474874792064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76505147-1	3.63173544236588	-2.12373592913843	0.791808457472826	-2.68213342393013	0.00731542768376127	0.0868678788702642	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70535655649344	1.58756080918295
Merged-chr10-118094037-3	9.44363682368322	0.856341957345121	0.737992814649404	1.16036625336514	0.245899720366077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00586377297625	2.65444350555997
Merged-chr13-49271995-4	7.08532616287546	0	1.29409745011302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-133032694-2	3.29079185367927	0	1.32728647826193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151610871-2	2.88269164480696	0	1.3709837229384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28319324-4	5.85051768556837	0	1.29806120715543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28932653-4	7.07046666514922	0	1.30667582650337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84202813-2	4.10014593960966	0	1.30576269435501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34041044-4	4.9427465276294	0	1.32467347565076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34847172-3	4.59660503939948	0	1.3392361005759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65389906-3	6.93757558144691	-1.68062468401651	0.805267332607527	-2.08703944139209	0.0368845694226047	0.297783428896655	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73395567895697	1.00443616959195
Merged-chr7-80179996-3	7.78521652457284	0.678289500859777	0.702608391516324	0.965387702523644	0.334350658606583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38750080637214	2.575641413063
Merged-chr4-128768318-2	4.32495886500557	0	1.31261381008673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46475756-1	2.14014041732819	0	1.55461988556199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106351723-3	2.98782749431444	0	1.49634797425151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11353711-1	1.49147257305333	0	1.55170748988035	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7203591-1	3.23790337985671	0	1.33862016390586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41051924-4	9.07465677790936	-0.630072823945905	0.700709788409308	-0.899192268137487	0.368550257995577	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03732860857578	2.05088435677382
Merged-chr15-63648493-1	2.02707599722065	0	1.38048459903549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120357064-1	1.81008179703882	0	1.42499810282074	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66908798-2	3.51274563196461	0	1.34275846147386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35466284-1	2.57902545296256	-3.1332630756256	1.42633999842192	-2.19671542485816	0.0280407765427387	0.243178843259695	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00359694954575	0.382164212378408
Merged-chr2-57288576-1	1.8350014312693	0	1.616096537586	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126285482-1	2.37315999109296	0	1.35416419969459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95529613-1	2.41844718039684	0	1.36538146604606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82234797-1	2.05370190167446	0	1.40037116716944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102795082-1	2.34582778115767	0	1.38617613932707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112216148-4	4.53306173324556	0	1.30746751887393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56731696-3	4.47075534022981	0	1.33140236511997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76292875-1	2.27853173693084	0	1.38432699575192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59753742-1	2.53033956665153	0	1.41632538376045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53872418-1	2.46327794130783	0	1.53687383979936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152104577-2	3.59901981082607	0	1.31509472594627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68252096-2	2.76390008717919	0	1.33463261484203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36744555-1	5.06332963629357	-1.98455162307402	0.857474918311207	-2.31441361221689	0.020645044918351	0.192011258928916	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08170109705161	0.825079211029734
Merged-chr9-85525037-4	9.86347987285976	-4.38456152872341	1.00800636480866	-4.3497359558396	1.36301552208193e-05	0.000648235897423332	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9028005481858	0.306240821987646
Merged-chr14-34467678-2	1.87094043875209	0	1.57019807818388	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133843368-2	4.85778766396979	-0.731677941429044	0.778187200747331	-0.94023384183957	0.347097626421708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19205269645496	2.73430231295182
Merged-chr2-24869732-1	1.94348770880272	0	1.41078980460071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8022165-1	2.98480786024794	0	1.39362485942625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9535771-1	2.0393567176851	0	1.48986153890881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9347918-6	14.5670688732824	-1.40248050628685	0.478186416867154	-2.93291581863665	0.00335794925835498	0.0482578738149252	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60840752520815	3.36706866445826
Merged-chr9-118638850-4	9.92072701006986	0	1.30612951075092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32153575-4	13.9612169263516	0.8748096976299	0.426152594833261	2.05280856725085	0.0400911473186148	0.31688998669604	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53411050129759	4.20704779662385
Merged-chr14-51902979-4	13.6257798662503	-0.694778583314748	0.473891802114704	-1.4661122648975	0.142617704920393	0.799476412947412	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40171757314292	3.47567228287744
Merged-chr10-111118546-4	4.9570785422869	0	1.30981316604176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64200683-2	4.80390473435716	0	1.30964549457147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19570953-4	9.82834646252127	1.27461532228677	0.633933141867786	2.01064629391565	0.0443628305239181	0.340690271878711	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71680086801487	2.41305793892793
Merged-chr16-49999862-4	8.43525994652093	0	1.30316240666215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56423107-3	6.4963207371908	0	1.30811800386112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76853773-4	5.41026476669427	0	1.30208062206987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95563438-2	4.31591764900936	0	1.36594554989246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125560708-2	4.6267972245049	0.998378091270183	0.916133851939672	1.08977316923327	0.27581307571709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11527139032343	2.03280651306513
Merged-chr11-80043086-3	4.26736703834469	0	1.33501190964422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123942214-4	6.03633412273641	0	1.32183637092575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59800432-3	4.31633602569588	-0.946924379829617	0.803570005435523	-1.17839687074482	0.238638424664084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51733586680487	1.50871668602081
Merged-chr17-44432969-3	5.96179485051033	0	1.3049801961683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60894333-3	4.69125520007411	1.30477097092236	1.30612590177174	0.998962633810769	0.317812792751287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr8-82416781-3	6.95546578837426	-2.03220474002631	0.82110973632823	-2.47494902339577	0.0133255194319139	0.137417575442477	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0232809438344	1.03295826569721
Merged-chr18-66073203-2	5.05215185928049	-0.107792653574104	0.910189077249105	-0.118428858649775	0.905727860777773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40215686040491	1.29948469469889
Merged-chr4-154189125-2	4.29036433271223	0	1.30436344823589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145802193-1	3.92921267468906	0	1.4008274862047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25034774-3	6.46796436764053	0.242838991149734	0.943271994254238	0.257443232311508	0.796836632665913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862813066341065	1.04220233489076
Merged-chr8-70866984-2	10.7460971385283	2.709891751111	0.714502670671985	3.79269646194935	0.000149020268535737	0.00434338914707239	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02863804461121	4.89980968676942
Merged-chr2-102808419-1	4.70651572036253	0.735442743933312	0.881431501841707	0.834373110555546	0.404070764853787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84154058066959	2.78011430379706
Merged-chr19-32788588-3	5.85159626972316	0.325100757138872	0.648425498684036	0.501369483153664	0.616111112756374	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45420562646454	3.01442870895611
Merged-chr12-55316610-1	2.83720064423399	-1.73978721861787	1.25680719508219	-1.38429126235555	0.166269288407911	0.891014672814777	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46355394133964	1.20539659680455
Merged-chr1-128548871-3	8.47198814894321	-0.748037236154672	0.720976834151531	-1.03753297016122	0.299487538406748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54736645635862	1.93871841517079
Merged-chr13-92331021-2	4.09262669072822	-4.35364574356139	1.14037452743075	-3.81773324363013	0.000134683435973059	0.00401868847331149	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12093223830384	0
Merged-chrX-142361263-4	7.41279420501375	0	1.30385937230774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127440094-4	11.2241190909933	-0.568520951355105	0.900589476167114	-0.631276476574783	0.527859765011659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61989575210347	1.17595087342351
Merged-chr18-89089177-4	4.69875748949353	0	1.32001076691716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32897661-3	5.39784526311059	0	1.29736001230257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26463962-2	13.398776035669	-0.976312945610202	0.611194049009895	-1.59738621014354	0.110179644413522	0.667328196204292	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.7970890960042	3.24185917622242
Merged-chr1-52800910-1	6.41437271586524	-0.378813786203449	0.756314670105059	-0.500867960356803	0.61646405263135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61201655889062	2.11265914598461
Merged-chr10-25433122-2	1.82838072625981	0	2.11253763561051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89828015-2	4.91289337980297	-0.791421426073069	0.874935230633887	-0.904548586413291	0.365704583442647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3273685579581	2.03280651306513
Merged-chr15-59600178-3	5.71670738224516	0.653108486266578	0.732283570656055	0.89187920149766	0.37245768373574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01743537318486	3.03635178011663
Merged-chr2-170347531-2	3.85068318860615	0	1.33631876540738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5099726-1	3.10220989900149	0	1.3900561763868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146465094-2	4.02470436398124	0.737908940856966	0.979670245949608	0.75322175385831	0.451316669136209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.805058992323882	1.65880184244346
Merged-chr13-45104878-1	7.38959642132496	-0.833206484493279	0.576733399559761	-1.44469955291178	0.148542295552515	0.823434411704668	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85040322574952	2.64333950319154
Merged-chr12-79002633-2	2.77049366042694	0	1.35935026328253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115034174-1	4.31224732203533	-0.0589510739025974	0.774753350475505	-0.0760901180568192	0.939347401997543	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19687046270123	1.6342703608096
Merged-chr5-72552836-1	3.69577635357455	0	1.3069606397157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117189428-2	3.05817659079099	0	1.35723098683963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128633905-4	8.32209719774122	0.240802843129783	1.29506400576715	0.185938951323985	0.852492636059977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.306240821987646
Merged-chr17-88476586-1	7.41203670567241	-2.00265711640536	0.760844059723005	-2.63215187240136	0.00848459260416327	0.0975601246369265	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60663549075971	2.4077129639533
Merged-chr4-53198492-4	8.41813646231584	-3.76185843335828	1.0202630729802	-3.68714553430799	0.000226783670093131	0.00600218943131054	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74088261474456	0
Merged-chr7-30348052-5	13.0273381641526	-0.924245641096218	0.456441930383804	-2.0248920609004	0.042878449004038	0.332258404911404	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.39732816098851	3.49521074430392
Merged-chr5-3247504-3	5.10720180036606	0	1.31955074296456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104986866-7	17.8998595726572	0.211787891561481	0.401997840795493	0.526838380878824	0.598305827326199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22042803940727	3.63362772566483
Merged-chr12-11276726-7	19.8058403673673	1.50938703944247	0.442891983685257	3.40802519585707	0.000654348524066331	0.0135786150059189	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87572222485703	4.35883337096404
Merged-chr10-108300989-2	3.92530544478646	0	1.33500042635949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153835844-2	3.03506905632189	0	1.34609803803468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116869444-3	4.22939065581148	0	1.32703258477766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68112762-4	11.7527837508813	0.874055920582654	0.556439008881379	1.57080274141776	0.116228475109101	0.693740037858906	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12330387252414	3.1133364412881
Merged-chr15-96735918-4	6.45749633620434	0	1.30473300867733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25292304-1	1.88433468025193	0	1.40618312486301	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8886850-3	4.84521241044181	-2.12814640039098	0.968947492935239	-2.19634852859175	0.0280670067438661	0.243374021056883	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71774443528456	0.994591904006138
Merged-chr8-71660961-7	18.268112522111	0.689436973401524	0.369337677861286	1.86668464856829	0.061945638769874	0.433858489930995	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09968405670473	4.7757602325158
Merged-chr7-101368442-4	10.1463230945006	-0.205649789352645	0.545034571887052	-0.37731512817734	0.705939430967396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71344707148441	3.17916347760512
Merged-chr2-160375041-3	5.44862025393167	0	1.30616072386431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17914765-4	3.98830287008194	0	1.35695861208039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151966756-4	5.17776064810982	1.95428108505072	1.28873018831033	1.51643928479165	0.129408311841123	0.747618738004601	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr17-21516443-2	7.3856945977626	0	1.2967953008844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102137792-2	3.88020715406786	0	1.31132828926487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25811600-3	4.80150329421682	0	1.33781181320535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3456491-3	3.35021346441523	0	1.34510378211028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157416684-4	10.9220769740229	-0.837147740716786	0.633018438315874	-1.32246975766455	0.186011773398658	0.967610678594863	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35850718763935	2.29675716151532
Merged-chr5-43881249-4	11.3166642816509	1.17761985806303	0.481674029813425	2.44484814454119	0.0144913143300525	0.145996364076686	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25295945867052	4.2758826209352
Merged-chr6-22409057-3	5.80553412297286	0	1.31944557759452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101840015-4	6.43311198813426	0	1.35377149187224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80830111-4	14.2941095608685	2.03638196079889	0.456734336500446	4.45856989076384	8.2508294653905e-06	0.0004337559953704	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05823260947617	5.20490958684529
Merged-chr15-81905218-4	11.1171785324015	2.99197218321789	0.604932260181113	4.945962350102	7.57686036302824e-07	6.43009762704472e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26353188638628	4.18597083288347
Merged-chr5-76179403-3	5.15055205155688	0	1.29846058427354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72461884-3	6.26341789216273	0	1.32555731716252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39436311-4	5.48054728325562	0	1.33689472330152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102719801-3	4.07513599075676	0	1.33019448533847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114794755-5	13.5737707518817	2.12344018595181	0.460685974673728	4.60930070088567	4.04025622605804e-06	0.000245138888902496	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81670326868871	4.83600760974956
Merged-chr11-110431666-3	5.20373641679095	0	1.3105676547036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-40763856-3	4.27503306605028	0	1.31153939250778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-86678539-3	10.6715929535609	2.5345104085147	0.557814757989017	4.54364172373619	5.52906016130746e-06	0.000314449055962399	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56456502836796	4.91648155866682
Merged-chr18-65512707-8	19.338794881558	-0.635617518855012	0.42457160029753	-1.49707968787735	0.134372524322676	0.767141968756734	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9924327877283	3.4035485405775
Merged-chr2-155534330-4	9.46207017691482	0.619234844220284	0.473008405794417	1.30914131045997	0.190486488107835	0.983450268775741	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64074763343929	4.22859393752096
Merged-chr11-116633144-3	8.3268989790091	1.18131308582922	0.508520208650436	2.32304059058795	0.0201769719844355	0.188478292683054	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62838398127949	4.66767127120057
Merged-chr9-84485163-1	1.85780494466522	0	1.4062843093278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4195407-3	6.52628216516398	0	1.29660169127665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124512259-1	5.01726859112312	0.519253589278238	0.906021287940111	0.573114115738704	0.566567430248008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42574852744358	1.83514313210961
Merged-chr4-31937782-1	5.01935323905028	-0.0350907985145956	0.641598726287781	-0.0546927496530847	0.956383245657284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0428299220397	3.17216837611484
Merged-chr3-84918059-1	2.5960563901291	-1.70952102095301	1.24526312455946	-1.3728191152836	0.169808586698493	0.905451807947754	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86746326129051	0.563523181795778
Merged-chr7-118160331-1	1.80388657233737	0	1.54102838185257	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66949672-1	2.70431912580042	0	1.53141826495491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59336735-1	2.29527009714035	0	1.39167898138081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-87027764-1	1.39218145912783	0	1.43131282642591	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141025630-3	5.36884082089845	0	1.3618227427704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93272052-1	2.63064590622863	0	1.38205827541704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109431112-1	2.72729867341125	0	1.38534681169659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-43453213-1	1.70214458392174	0	1.46257724998849	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-40329817-3	11.4796860268111	1.72170692427674	0.994617819380894	1.73102360598006	0.083447554276261	0.541269602751923	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.73830414206781
Merged-chr1-138921471-1	1.7599734716727	0	1.49741041203146	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148837190-1	4.11832069963506	0.054090782318126	1.040417599164	0.0519894918747908	0.958537066360719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51715173728882	0.793480537552656
Merged-chr13-49300847-1	4.52156719716128	0	1.30499755418547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88986785-1	6.66134976816318	1.59981317352165	0.737957831379969	2.16789239912262	0.0301668743122276	0.257724238078828	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39632831439826	2.73855547031609
Merged-chrX-12260525-1	3.20874588808056	0	1.37078735070776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-20452614-1	1.06462736540811	0	1.60714987909864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149892471-1	2.31843586447425	0	1.34755128682569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128305101-4	3.88162848227094	0	1.37618555845544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113644386-2	4.40733461927832	0	1.33238692139848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146113272-1	1.9847816675231	0	1.4086628310006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158606635-1	2.38268651005176	0	1.36444052187771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19853927-2	3.65793283262908	0.864018272245767	1.17589133156888	0.734777312366944	0.462475126485219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0.892489746801999
Merged-chr4-123991129-1	7.89359474391655	-1.93887460047696	0.602577642116354	-3.21763448386055	0.00129252417389648	0.023196143960101	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95133494113793	1.93871841517079
Merged-chr14-45772812-1	6.56817153993941	0.867329530199578	0.718959741800349	1.20636731067542	0.227675894539322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54430273730617	2.7705374360976
Merged-chr5-115125352-2	3.6780917695906	0	1.32354367774107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80686216-1	1.88001915019223	0	1.60499849747062	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10457897-1	5.34807128734748	2.53537414848864	0.917833822318515	2.76234552141922	0.00573877112946705	0.0722554408913592	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34336154576643	2.72360508656996
Merged-chr2-103547354-1	2.57624472746473	0	1.35537771462777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168629024-1	2.4219695376035	2.45807811054697	1.27460971975306	1.92849471681668	0.0537936207588372	0.390968517640638	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr7-101540017-1	1.9185935855098	0	1.35912707448929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70926665-1	3.19537783115227	-3.71220126323817	1.13627969353369	-3.26697844233551	0.00108701957528685	0.0202422091740303	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04568928874848	0.382164212378408
Merged-chr11-85574670-3	4.59706008316421	0	1.3267233764711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19764813-1	1.74129244220828	0	1.44373601224553	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121450793-2	3.40280752753024	0	1.40089897628972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33897910-3	9.18030158254959	0.309096873556348	0.493702058961653	0.626079774118091	0.531262617869728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29783952598034	3.55524673985241
Merged-chr18-34080207-3	4.96631972417761	0	1.30666502705948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98086211-3	8.86322766376482	0.941218400742197	0.570057743209328	1.65109309004961	0.0987195680625265	0.614608316941107	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06571059345917	3.40619412439842
Merged-chr2-45100178-4	6.96026178058547	0	1.29610939126389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125684801-2	3.7883142780177	0	1.32262346556605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54180006-2	5.23837880502873	0	1.31180020699864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119335086-2	2.98910629894176	0	1.39411980593274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51652939-4	5.74903160284487	0	1.29350590017441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75904438-3	11.576755761628	3.59912478097578	0.946409098132208	3.80292707253011	0.000142996460525063	0.00420343981532649	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	2.92526156064402
Merged-chr9-107645750-6	16.5303960732419	0.519251693242091	0.323945421979095	1.60289869222353	0.108957022476908	0.662070447347595	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49122304388967	4.98909771270981
Merged-chr5-52461860-5	17.8047745650293	0.159951713334792	0.409615412786953	0.390492418843589	0.696172460146785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63670175857925	4.72947058659898
Merged-chr9-123989857-2	3.41471444453007	0	1.35038556016416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8913255-2	3.61690851443243	0	1.34733744432294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32493835-2	3.88760294172673	0	1.32379883972508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73459924-2	3.54432208117999	0	1.3543461459315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44561219-2	3.46082833215907	0	1.33017670798618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108918704-3	6.38516436491947	-2.77615255650934	1.06775968650794	-2.5999788075804	0.00932295177526557	0.105073750725509	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74947827927007	0.61242769162773
Merged-chr5-143594455-6	14.1744804691227	-1.14999340397432	0.468198264370958	-2.45621030979125	0.0140410957940179	0.14256206428774	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.09623504738666	3.22359957279206
Merged-chr13-96435897-4	5.05493513350327	0	1.31880772888719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117936465-5	12.1434925992802	0.572079285023802	0.582566737574676	0.981997852135303	0.326100906361499	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29844510615423	4.95745130067196
Merged-chrX-13482757-3	5.82292588622365	0	1.31460784492608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-139381867-1	3.41577193378417	0	1.31035076396389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65466304-4	5.65748534156597	0	1.31453601463898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133344316-2	3.76602967629509	-1.82027387168419	0.897047898449899	-2.02918247155991	0.0424397082396907	0.32960128055988	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01426402875537	1.14490468848716
Merged-chr14-21101907-1	4.22154369474499	0.333275132033025	1.01234893442672	0.329209742510131	0.741997159551824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40644723134628	1.32121820265614
Merged-chr1-55821302-2	8.60110219455032	-0.0895039669910535	0.610993041127227	-0.146489339429999	0.883535105039403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05013705437444	3.27597054552072
Merged-chr7-35595028-3	8.25483939177072	1.0586177688797	0.64971843732519	1.62934851169977	0.103239261937434	0.636687893439036	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83086157030234	4.44403150744747
Merged-chr3-27275414-4	5.75444635837568	0	1.30998934824098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135175215-4	10.9219428604352	-1.46753134847088	0.468849587275372	-3.1300685514072	0.00174765514409871	0.0292301697072625	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.59941309980101	3.22395518997583
Merged-chr10-8072804-6	13.6156764691538	1.41434695302424	0.4583956574652	3.08542834119587	0.00203259196194919	0.0327954949001314	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80183118242136	4.07186604202289
Merged-chr4-124738244-2	2.27971815421856	0	1.4500678049428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28419858-1	3.40485505979186	0	1.34119397344275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128773409-2	3.04790354416788	0	1.33031024180832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128734441-1	7.00261653032985	1.63670478019514	0.683016932894204	2.39628726810593	0.0165621043109938	0.16179806672241	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46082476840094	3.36793544212227
Merged-chr1-33503733-1	2.58339252010168	0	1.35449388393518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34650542-1	6.45774019410999	1.08823809469102	0.819063351230103	1.32863726970161	0.183967669893525	0.959454210444573	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51143704472007	1.89961628724531
Merged-chrX-140509868-2	2.03411508310539	0	1.52512165321899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92127384-1	2.44649438220208	0	1.34270186352803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109005994-3	6.25000328361011	-1.98077410700235	0.796181605941049	-2.48784208555178	0.0128520785519336	0.133944485654649	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90016805009069	1.7821740460218
Merged-chr19-37146349-2	4.2147264331512	0	1.31502523558769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4568122-2	2.72513213742863	0	1.35139357030386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46705344-2	3.13419352311243	0	1.36484480462575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6106361-1	5.11669584357466	-1.86176381269924	0.769236328395314	-2.42027546538658	0.0155087537626733	0.153690479735464	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35838102788225	1.65199033198162
Merged-chr9-21134823-3	4.04742611348058	0	1.31598237730486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4573898-2	3.5414846037885	0	1.35409846551316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-151771278-2	2.19191472488912	0.739683247205926	1.42086311590566	0.520587267644324	0.602654320855435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.382164212378408
Merged-chr2-91089618-2	3.69041418580799	0	1.32641778558339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44239562-2	5.8686226744746	-1.26332180646645	0.861792739021861	-1.4659230105609	0.142669262364147	0.799628237280002	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47059292432119	1.57664565284388
Merged-chr4-119962237-2	9.70450733176959	0.104687912836467	0.43327198304144	0.241621699380582	0.809073306529389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92195043071219	4.0238625127305
Merged-chr16-32060036-4	6.1461197099276	0	1.31225476679846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12806439-6	11.8714183365561	-0.397866218223027	0.406163197541082	-0.979572301556899	0.32729728296975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26882681483561	3.94739292284606
Merged-chr5-139705287-6	23.0918037988803	-0.534260582593074	0.439630069398799	-1.2152503201696	0.224270633526203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.42418084309238	4.86741929821921
Merged-chr16-57309978-4	9.74519839585776	0.496350034363504	1.07279229586419	0.46267113986279	0.643600107882649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.761354961697477	0.581381506691384
Merged-chr1-172411013-5	15.4478616863214	-0.0354890720070657	0.460583038253792	-0.0770524944679148	0.938581784510854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43820237515156	4.1123913312204
Merged-chr18-54963321-3	6.98580889678179	0	1.30615012065741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83147445-1	4.6316746295954	-0.164340568935318	0.63264993332333	-0.259765409397946	0.795044734501049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49521571327673	2.68980361513465
Merged-chr3-79060867-3	10.5160640933186	-2.04906666267887	0.683507097331269	-2.99787181534674	0.00271871997864709	0.0411434635768117	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90542148924961	1.41926493179619
Merged-chr13-97208289-4	5.75546163122843	0	1.31577509590672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5250088-4	6.15165566144015	0	1.35146767839402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16191374-2	3.86533651866485	0	1.34007579569777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105347994-3	3.83274947862206	0	1.31545642864864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27629663-4	4.57142226359185	0	1.32997807412222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76702271-4	9.27823708582303	-0.461072149494711	0.725700213941754	-0.635347958615481	0.5252015014264	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1921265697347	1.9163454460826
Merged-chr9-101182196-3	8.33993516520434	-0.500774082686531	0.628719008898963	-0.796499033111002	0.425742037282719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88931789776288	2.21565186750098
Merged-chr3-60531489-4	9.87019233984387	2.00244477291364	0.703526324927052	2.84629686475666	0.00442309391505273	0.0591812909371322	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71919082415463	3.39685684651355
Merged-chr17-71271776-1	5.26647923192649	-0.628059893454264	0.740738317306093	-0.847883630130521	0.396502782010317	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84533543074461	2.83098930992088
Merged-chr19-53547747-2	2.83589558048287	0	1.37562671255055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94647344-4	4.71024035876641	0	1.36786660867941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170170387-2	3.85960982911329	0	1.31304510233743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140641026-3	6.27957433858843	0	1.3026225178537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106640981-4	8.81865277753022	-0.250518779739302	0.712305173020373	-0.35170147463205	0.725062154541114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46405565066069	2.22674752688732
Merged-chr8-127815423-3	6.37400463219715	1.95404287797976	1.27788177610297	1.52912649238869	0.126233088924495	0.73545180357169	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr2-35449880-3	4.77161700217342	0	1.338854732109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53147859-2	6.21440350659985	-1.46255161103143	0.761145100468049	-1.9215148466857	0.0546668324596021	0.395467600343757	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14063647425758	1.57964324217899
Merged-chr8-40852079-6	25.55358040838	-0.643576696377432	0.547129974173933	-1.17627753322986	0.239483990559487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96383799210516	2.31747866375397
Merged-chr11-22759927-3	3.8618294620553	0	1.3199327570758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-139882250-5	14.4045219399404	-0.295310066756735	0.536656578309414	-0.550277549353865	0.58212902041767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5009034318248	2.6366167772367
Merged-chr4-136260596-1	1.38161243626624	0	1.54655477761612	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20888172-1	2.38599237863926	0	1.39156204866325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34602911-1	1.63154768421826	0	1.57138786530521	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19092152-1	1.79687373680877	0	1.41875414544146	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98780309-3	4.56711349428965	0	1.32783655933718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160144180-1	1.32880240082356	0	1.45494908051845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106414370-1	2.57103305408116	0	1.39049936091965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8978772-1	3.22737872125229	1.34002183906484	1.0423049654059	1.28563317219063	0.198571114015462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	1.41695929335733
Merged-chr9-68884620-1	1.88377658319937	0	1.45373591522539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100421298-1	2.02437101138136	0	1.38216419571964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73215778-1	1.15253697912705	0	1.54391327423881	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88343518-1	1.96824116965466	0	1.41823213869738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92862688-1	2.07660310777945	0	1.49383573710754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89668226-3	6.93962012821062	0.744839195337273	0.699300886026786	1.06511976492583	0.286821736130708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46417126103046	3.37981902381829
Merged-chr13-12475552-3	5.18993075800018	0	1.29518725249733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90896322-1	1.99720854868084	0	1.45436674397471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48855650-3	5.73983959154939	0	1.30061383571936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64060215-1	2.03158381421148	0	1.47867870666864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57925073-2	2.97598283085628	0	1.34841918119898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75472815-2	2.94042392597292	0	1.35788673599648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40978093-2	4.30600190031549	0	1.33089991010824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16343582-1	2.30125623529007	0	1.39587742855669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22345946-1	1.73988787401044	0	1.41028220210548	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58073439-2	3.65285264095816	0	1.31402215154147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117248536-1	2.59831292015857	0	1.34415177316695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34037912-1	1.92667932433265	0	1.47487014499634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-66944556-1	2.68227070907267	0	1.38108528826193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99130258-1	2.22859794178317	0	1.40783972634178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76473966-1	5.12691162902306	-0.435647759066196	0.722285206270898	-0.60315198938576	0.546407583258426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34510175220792	2.73256591961119
Merged-chr11-19968016-3	5.44069184496204	0	1.35067180946685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35959224-1	4.14235380762258	0	1.33118450889821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67562909-1	1.98152982860333	2.51466828406426	1.38608768703932	1.81422020235645	0.0696438310928727	0.473514284319515	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr7-98374762-2	6.24917028292076	0.510993756276275	0.578831900114224	0.882801649624766	0.37734344905604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85633530821561	3.70089187832907
Merged-chr10-39456510-1	2.41969868342971	0	1.37103432346954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95248258-1	1.63554873146506	0	1.44205742601766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122400397-3	5.93714475354354	0	1.31851890976606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9642110-2	2.92317373625022	0	1.34018753192708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4516300-2	4.74940143144379	0	1.33403258884658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106429253-2	7.39643764402471	-1.04586613513162	0.621585387160582	-1.68257838220612	0.0924567394895308	0.584188561079373	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60603050488133	3.40826520406583
Merged-chr18-80420088-7	24.8262997631661	1.13106557401837	0.333299482605912	3.39354134358414	0.000689951429326699	0.0141334063011857	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40124195674556	5.5023777617926
Merged-chr7-4836449-4	5.75284940148888	0	1.30384384353706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111035667-5	10.9580974814907	1.24090374643854	0.393455116621632	3.15386353872699	0.0016112440818778	0.0274045694363317	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47216434814933	4.56516395675844
Merged-chr9-3258861-3	6.55760060783182	0	1.33345404553791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51796559-4	7.57582661841457	0	1.29968074063598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21037660-2	5.3039058561167	2.48025689820349	1.1926116803567	2.07968523120759	0.037554413593941	0.30166327113825	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr7-17003387-2	4.93092616205026	0	1.30363535587129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86484536-3	3.961743885128	0	1.35608437320778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32280763-4	5.52126766258838	0	1.3130966137195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83682071-3	7.65693267860189	-1.11708624145388	0.756819951956768	-1.47602641627727	0.139936800840304	0.789060331813819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18601790446763	1.428339764855
Merged-chr11-6484576-3	10.417682699661	0.75764358793273	0.642382473513261	1.1794275516097	0.238227969557361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66183756919659	2.39006831005986
Merged-chr12-17556980-6	15.6255177931628	0.99326044815659	0.432653113981138	2.29574320872655	0.0216905683214255	0.199632658807305	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42920801193995	5.10524292556991
Merged-chr15-90633989-4	12.9314468592355	-0.813295386043102	0.432058885352777	-1.88237162482851	0.0597855757756441	0.422602788440801	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25511788691084	4.58742111384487
Merged-chr11-64517080-5	14.4095836964766	-0.626228591622971	0.574595986205881	-1.08985897335974	0.27577527129009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50420983251334	2.29157889616742
Merged-chr9-110985768-2	9.32034187801632	-0.309320240119777	0.594464704618981	-0.520334071503933	0.602830752485799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21037021725955	3.94745843011017
Merged-chr9-56744557-3	5.2076112375938	0	1.31862300796453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86920961-2	4.21934475635345	0	1.33112785826453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72691551-2	4.13037182381791	0	1.31700892403682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31446110-2	3.86875344302181	0	1.35731600782072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34282255-2	3.33183178485824	0	1.42741412418714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83385681-4	5.817919623439	0	1.31944348720212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153431905-4	4.79693942271966	0	1.33284271159462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138993714-2	3.30616854650656	0	1.370934893035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44448247-4	5.94810645187945	0	1.30870354022578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137857386-6	18.1790122089443	-0.394314564969262	0.355226139077697	-1.11003814638487	0.266982588933578	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97373852343081	4.64185411837661
Merged-chr3-136347515-2	6.94202961770034	-0.397383959051542	0.722547586002367	-0.549976177001911	0.582335713585345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03702297403946	1.37490486545505
Merged-chr1-172046532-5	17.8008234415735	0.356428789793515	0.32143123838712	1.10888036763945	0.267481794172938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.11666172300455	5.54831129441337
Merged-chr8-123145450-1	5.81501175191965	-3.48380870619473	1.08435715309945	-3.21278713036278	0.00131453678864075	0.0234506472810588	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35141750544629	0
Merged-chr4-34733626-2	3.05561788691183	0	1.37987087701072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-89400883-1	3.54049316983095	0	1.33737859585064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9011802-1	4.60112399460856	0	1.32047012612793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14692347-4	5.0748730134316	0	1.2992292541743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57286946-1	4.11203852872167	0	1.34367986658503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61337323-4	8.71930828443337	0	1.32626202055225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6225476-4	7.92348653018061	0.88041384070526	0.707644226854531	1.24414756355561	0.213445258389185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51886169799349	1.62042974503458
Merged-chr6-87998082-2	4.71776007435891	0	1.30252873859277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42795130-5	13.2190962771225	-0.243339182361477	0.425943227323139	-0.571294873945417	0.567799775890629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87727915642793	3.70526402169493
Merged-chr19-17263927-2	12.3177352492951	0.68104184662734	0.595724376439191	1.14321634897352	0.252948775949119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32430210012347	3.12940667710276
Merged-chr3-152905957-5	13.7425925987316	-1.11134100418045	0.480264124325101	-2.31402044810692	0.0206666005163636	0.19215704003163	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81504436907234	3.72997320180341
Merged-chr7-88259853-4	4.57111886189958	0	1.30291232389375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6391669-2	2.28198990303703	0	1.42713326149492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122348987-2	7.72882489358338	3.41369758706555	1.02003574032451	3.34664507537698	0.000817958658528871	0.0162591383537102	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.03056478861164
Merged-chr17-46453558-3	3.6850979454321	0	1.33026350624826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23689130-2	4.82447019745803	3.16856880765279	1.095509793186	2.89232358063896	0.00382403877419251	0.0532351166890464	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	2.51012229023221
Merged-chr7-45389146-1	2.99708723220323	0	1.33670290080561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6665481-2	2.58938912937467	0	1.4291619841198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81767181-1	3.07063049642901	0	1.33334930503895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40392741-1	1.95514462575519	0	1.56870079343064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-31939323-1	2.2578700600743	0	1.38954584342204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42906590-2	6.24706538451249	0.655459385041048	0.923132403430158	0.710038324519326	0.477680370680558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.931934640739014	1.41695929335733
Merged-chr18-64956093-1	1.32530421196702	0	2.29633220723467	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32960844-2	4.21024111916827	0	1.31374484988059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44963297-2	3.18168547504977	0	1.34641058451473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82903178-2	2.61406082649717	0	1.39877607634591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41390299-1	2.65155648286965	0	1.32876186685951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7897740-3	4.40660584751838	0	1.31401964014651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32866626-2	4.38810165855122	0	1.33123039041023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88866024-1	1.51270965565962	0	1.47686838156208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58754789-2	6.41992060036328	-0.704506273623523	0.682224013556772	-1.03266120749779	0.301762473544587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2047034552491	2.59408797040742
Merged-chr15-35140002-1	2.19316611431451	0	1.3912109740747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8667658-4	5.86005994714571	0	1.30435132930731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131096624-3	7.9533254975059	0.0590450331568671	0.579799941725898	0.101836907711834	0.918886129807283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82343190356453	2.59343415562495
Merged-chr1-121483328-1	3.99332041579346	-2.18699198352834	0.962485016255748	-2.27223483648209	0.0230723302342035	0.209487910446611	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78170694217107	1.41695929335733
Merged-chr15-59665569-2	3.51002973734868	0	1.38276719693077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99576038-3	4.83481849294314	0	1.32347967511283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35814937-4	7.71321136985845	0.994122972919387	0.936300980390995	1.06175577484095	0.288346571666031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	1.13404870833161
Merged-chr13-94164491-2	3.12019713181935	0	1.34443187978131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61269352-1	5.38878482481237	-3.45401920526991	0.862808411312526	-4.00322848037094	6.24839043933986e-05	0.00218462986436117	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05241393415398	1.10936615683937
Merged-chr7-66310129-4	4.36494225455554	0	1.35029363069679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126385131-2	6.88325107489723	-2.12275192641612	0.850466667957264	-2.49598485913006	0.0125607962815098	0.131685832474176	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24849391678543	1.08974267817771
Merged-chr6-97819182-3	6.71512782271957	0.892156444113539	0.872789251490436	1.02218999900609	0.306690983286222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30291351005996	1.01372795773128
Merged-chr13-45416846-1	2.71954890630647	0	1.3594301360038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-50962489-1	2.17684359900233	0	1.3782229668479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100852064-1	2.46311131773643	0	1.35555005367957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-68883207-3	5.37670552799847	0	1.31633851786816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121409197-5	8.31409855919824	-0.232281262445754	0.702252342463708	-0.330766091332416	0.74082117569259	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03756921332596	2.26276386882201
Merged-chr12-85350001-1	2.47214765292123	0	1.41921045725528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86880374-4	10.5926343085119	0.0347530514095647	0.457019160658441	0.076042876100632	0.939384986732821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66529245523659	3.68924713944147
Merged-chr15-59643955-4	4.88675603324613	0	1.33801844628532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40096002-2	2.7797482735294	0	1.44907698060539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111433192-3	5.56563875581623	0	1.3208097532865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120057950-3	7.79243406647401	1.53063483569027	0.963025222420424	1.58940264497252	0.111969517844375	0.675102602115927	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.86914304741896	1.99834080004871
Merged-chr1-161767390-3	9.59935245697303	-0.0939744729040917	0.600763211797966	-0.156425145645727	0.875697917780679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49490308828279	2.86554435289797
Merged-chr6-135250834-5	13.4814426301603	-0.36387254341326	0.504508592601829	-0.721241518477837	0.470760931245097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74122609608784	4.22092992147609
Merged-chr18-60816155-5	16.9454594596308	2.20725025012315	0.47720134395688	4.62540660891893	3.73864236488428e-06	0.000229826269027026	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18954978227981	5.16875842835647
Merged-chr2-79865467-4	5.70208619780488	0	1.34258470038484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121243100-3	3.78280697814617	0	1.32936248400488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171613490-3	11.4144634118495	-0.602371881137811	0.412015669151645	-1.46201206953638	0.143737902472132	0.803585099066248	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.52771919086058	3.2128812328455
Merged-chr2-6726320-3	3.79458243790138	0	1.33405891969783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76944471-2	5.67110130343024	-0.738931490876364	0.847732274755163	-0.871656669070171	0.383395705555573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13127142508775	1.41959898789419
Merged-chr13-73970708-4	5.24803243209817	0	1.29520095478263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166457548-3	4.39908249573692	0	1.31149591460434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7873871-2	4.39835378750037	0	1.30718323451366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106373151-4	5.94372271699343	3.03364167174555	1.13980774902998	2.66153803071377	0.00777845532801958	0.0909937239285298	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.735627456805112
Merged-chr9-98330363-3	4.00801470849346	0	1.31412735355131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34674432-6	14.515304987383	-0.618759944055515	0.506263362729701	-1.22220960394852	0.221628372948488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68900337762153	2.61960051891651
Merged-chr6-54946308-1	2.55282782461405	0	1.34977174032335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17579049-4	5.44448063671508	0	1.32123813957809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171463364-2	4.25676156261133	2.8985328507532	1.23068852006042	2.35521239006186	0.0185121214094962	0.176530733313218	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15637648126681
Merged-chr2-59339837-3	6.86227620416262	0	1.33038188298492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83072216-2	7.00880773129862	2.08482013686712	0.855536125059025	2.4368581007883	0.0148154918823396	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.973873180804663	2.35476919581267
Merged-chr1-6976410-1	3.61204381342819	0	1.4062166859608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63407671-2	4.26963815741724	0	1.39356919732871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84979472-3	5.5147759926131	0	1.31336386202782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70570372-2	3.19453528942163	-3.29271995823826	1.14382101642985	-2.87870209669311	0.00399315338259218	0.054945588742655	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71919765292249	0.306240821987646
Merged-chr18-60815335-1	4.40133714661144	0.0670069558166797	0.831509694028513	0.0805846958825497	0.93577223753431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04277783527712	1.61691174577224
Merged-chr14-20829617-2	4.1068160335741	0	1.30751318802782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120800346-1	1.12703905327709	-3.60207900870479	1.47742138269457	-2.43808506557228	0.014765298969347	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43506808754123	0
Merged-chr9-14717945-1	2.50897696281873	0	1.33779285640362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4667373-1	2.92615131485976	0	1.33428475666985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108699232-1	2.19748243232297	0	1.47898103350584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-14898930-1	1.74556637803556	0	1.47819062753083	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134171071-4	9.7900665570755	-0.596707362082774	0.601961898645203	-0.991270981478637	0.321553278644583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28323068079711	2.83995505205827
Merged-chr5-92466110-2	4.42691771656845	0	1.30506039534177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101545981-1	1.1027985177969	0	1.6071704169967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117370578-1	1.98693427959732	0	1.36191265478198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13503233-2	2.39712059336454	0	1.38096664011884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72820277-1	2.92059265073633	0	1.36566874425221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28723197-1	1.72938391178018	0	1.45992289287835	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162040761-1	3.08010868110313	-1.77251917751116	1.17359252011454	-1.51033612359609	0.130957678660921	0.754169425379091	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	0
Merged-chr11-99200916-2	4.14577711717132	0	1.35504074920455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143271827-1	1.14808959143021	0	1.683774402999	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31130958-1	2.87677826666512	0	1.3348879080767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53258902-1	1.51613501080121	0	1.60196111855564	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133166549-6	20.235430417645	0.702445504285696	0.400529448435863	1.75379240410129	0.0794660850973349	0.522571278733063	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19031902028406	4.71769556923633
Merged-chr6-88821060-3	5.92212558025574	0	1.33629696370625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59925404-4	7.09528185600231	0	1.3044646904312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44539114-5	14.4792230944798	1.81549760233257	0.506473188055995	3.58458778301973	0.000337611002081511	0.00819826404385672	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97042750748	3.90293024025087
Merged-chr9-48163230-3	6.12094442225981	-1.48401519649017	0.85678542029323	-1.73207335388862	0.0832605027730517	0.5404530460125	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49392258342519	1.19380919831911
Merged-chr4-105306211-2	3.54609919986553	0	1.3201901661461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64919451-4	4.98497714592939	0	1.3143310075181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31399458-2	3.39459428641945	0	1.43029593383487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34541171-3	4.24460437887332	0	1.38049443856344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23758241-1	4.96289325388502	-0.631155547849484	0.580348164464574	-1.08754638421539	0.276795411078956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48598474655957	2.48211543439749
Merged-chr16-32651208-3	4.60330936470734	0	1.33950959312324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-141038554-3	7.96600236258805	0	1.34489466629914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23790609-5	14.2921033561331	0.137385309129474	0.48557406921038	0.282933784649754	0.777227595844986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05998631059321	4.16063286002871
Merged-chr6-145767167-2	8.54557214742628	-0.434073560553036	0.619996951202985	-0.700122088843824	0.483851062260885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31179170967873	3.04002873292877
Merged-chr5-114769732-1	3.17923219446367	0	1.37418725658071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48862093-2	4.08113155255739	0	1.34010395350381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11411925-1	3.69903262416157	0	1.4246971016719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164867842-3	10.2662635713754	-0.0371463558349672	0.495442185262843	-0.0749761666242857	0.940233674785517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64623564369406	3.67982718132204
Merged-chr5-24044094-3	6.89469586349848	-5.28684103352425	1.05620822463151	-5.00549125658314	5.57197421993968e-07	5.06406435850039e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05047400058496	0
Merged-chr4-3511685-4	5.88219654530114	0	1.30798145779535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54494393-6	12.2281033060857	0.592343688478129	0.48331484810806	1.22558553869566	0.22035468256649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97121503074524	3.94614781226369
Merged-chr4-101223300-2	3.95805609055804	0	1.31764120930723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112259632-6	14.8208636845517	-1.52774686717707	0.46723098556667	-3.26978927847471	0.00107627627230728	0.0200829095631615	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85882436077143	3.18272394346079
Merged-chr6-143361528-4	5.67135640219767	0	1.31444094189858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11694329-2	2.70176528329928	0	1.37305186600621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120579447-1	3.64348750800967	0	1.34401367858746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30636490-2	4.73529181212393	0	1.35727488021673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160336830-1	3.25949484672311	0	1.34562867099374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46563378-2	10.4222110742249	0.686448892007653	0.434116765979954	1.58125404453822	0.113819962640126	0.682919775840756	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94583462489176	4.61046515730818
Merged-chr5-115534411-2	3.35202241564848	0	1.39593519572016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50364785-2	3.7342547999868	0	1.33761878639328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96413697-2	4.84869348342169	-1.48501419363348	1.14798142251921	-1.2935873042045	0.19580801009702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10658790029851	0.306240821987646
Merged-chr8-126588073-2	4.05330826896088	0	1.36809081661657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94341606-5	16.585993771427	0.374879446723678	0.563812702262877	0.664900675736977	0.506114023508209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22247029931842	3.68080201688319
Merged-chr12-10689136-4	8.78529318963927	1.47807899440357	0.885026037400901	1.67009662082295	0.0949002486273456	0.595997275041089	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.986001542860159	2.26085595654656
Merged-chr12-79912466-3	3.99400691498075	0	1.34209263229719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27718907-2	4.62642301395903	0	1.307126881266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55103727-3	5.47382994616702	0	1.33263114547059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61321696-2	2.7900416334929	0	1.36749865638296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41267982-3	7.60050327411424	0.967983234687517	0.965297473746771	1.00278231427492	0.315965903819986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.756987780647496	1.31470332505763
Merged-chr16-87607601-2	4.79278675963273	-3.84148317475762	1.07823521698529	-3.56275060788525	0.000366989288152053	0.00867943612869492	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40427457974397	0
Merged-chr3-115644505-1	2.36582872796676	0	1.37408627420633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-56428383-2	3.38804879689712	0	1.33692094179588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118702404-1	2.12815652113443	0	1.39364431787329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43919943-1	3.02092697848008	0	1.39436100894201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32744848-4	4.73893592192306	0	1.34361469252733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156540368-1	2.42331621476801	0	1.39059219285318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111124965-1	3.19821923267386	0	1.39106147848924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34749919-2	2.93227975177597	0	1.38577250468177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-40368100-2	3.41666286112953	0.279044954249043	0.88089705834805	0.316773624800538	0.751415378685767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98997122640894	2.20491078807447
Merged-chr1-74243019-2	3.87745378577449	0	1.31743701145515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-81044377-11	31.4742183464023	0.665236682440461	0.351159453296007	1.89440060974154	0.0581718555695673	0.414762473982427	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75916677365782	5.42381403571309
Merged-chr1-80660652-3	5.38411698740732	0	1.34488263288414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34256820-2	3.28650450226838	0	1.32483180946096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54118614-3	5.47192768739192	0	1.31987669724161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155708760-4	5.46278255796993	0	1.30995227875428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63417511-4	6.22177489337971	0	1.31231287210568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121898278-2	7.31075603329501	-2.34178361731277	0.846481739054723	-2.76649041469916	0.0056663250632022	0.0715500826241567	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3470407470741	1.43116362910629
Merged-chr17-27588491-2	10.2870114171376	0.415915005692457	0.596086064970342	0.697743212153685	0.485337798834865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68225081296125	2.49543344361845
Merged-chr13-92320941-2	7.21018123055011	-0.439671347671875	0.630372976462002	-0.697478102788529	0.485503638387523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69563479739983	3.35979880313945
Merged-chr3-115644118-2	3.95947531531285	0	1.32394210968798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59220622-3	5.03459231283262	0.658093484048171	0.909492653341925	0.723583067581702	0.46932173974434	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13899832209312	1.46928333126936
Merged-chr1-167231232-3	3.97050478936442	0	1.34030442429358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33397264-1	3.15486073593431	0	1.3465707172477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42171201-1	1.88204967196357	0	1.38285681185333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-36952361-4	5.53126207207318	0	1.29364243750123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55341972-1	2.6073952981455	0	1.44778306298419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105316662-2	10.0341847269728	0.345490000306299	0.480361157725638	0.719229676983227	0.471999416887553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89948433405283	4.03035381686409
Merged-chr2-21065187-4	5.34551674725944	0	1.34142969059461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69666914-2	4.17524530997691	0	1.35013738245089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44926501-2	3.5437564390179	0	1.32083531134907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71292117-2	4.83217466260409	0	1.31027126256221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-18873529-4	6.43037287297491	0	1.31273507732492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63906699-4	10.081846525984	0.34358851671045	0.761317869798841	0.451307568547201	0.65176789073951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56230431858246	1.76628008406346
Merged-chr9-119261958-3	5.43278587467303	2.82780511918175	1.10767853576237	2.55291136181085	0.0106826678513879	0.11669502063136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.31470332505763
Merged-chr7-114817724-3	4.79030510502195	0	1.32225402698453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101584355-2	8.11314551546905	2.78603226708205	0.800198833000197	3.4816749939966	0.000498288077220442	0.0109580679624942	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.906093788277747	3.31805786227732
Merged-chr12-85589466-3	8.26222140853928	0	1.30136254905459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136559950-3	5.56585412594756	0	1.31586664025846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84794133-4	7.67261500389555	0	1.33290673413098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81127240-2	5.0825230192603	-0.754987604590341	0.983977545126985	-0.767281335157814	0.442914263312759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39524630788955	0.733321818366247
Merged-chr19-56726613-2	4.51315094307241	0	1.31696001735323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145026919-2	7.08254975949718	-0.380971020801115	0.85521645888007	-0.445467363081398	0.655982040404513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9868598655275	1.21653520045322
Merged-chr6-85402938-2	2.75351132685899	0	1.35598666072849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62344429-6	18.0049086151369	0	1.28384433356904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20209060-2	4.2847449444114	0	1.33107469259512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-61958403-1	2.04554862855975	0	1.45338398673746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56313130-1	1.47272082385196	0	1.43262925218448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32823096-1	1.86473857814181	0	1.58623050756232	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128414921-2	5.01207295788514	1.92212909524272	1.1959999112016	1.60713146986072	0.108025531198456	0.657572087721873	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.683637474991079
Merged-chr3-59079474-3	3.54450051185699	0	1.31705210545785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-47954464-1	2.55714883256573	-2.6079831875048	1.17248018180422	-2.22433029400259	0.0261262299366553	0.230065326383277	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71811236549903	0.563523181795778
Merged-chr11-121342909-1	2.72474559804221	0	1.37082691556715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12911931-1	2.8892438680115	-0.427757966152504	1.26782810482537	-0.33739429227389	0.735819686783089	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.953107588689112	0.581381506691384
Merged-chrX-159864521-1	3.20378214415416	-1.24105575832824	0.949880169399775	-1.3065392860159	0.191369228171204	0.986604622017791	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09609238571705	1.07938469868934
Merged-chr8-54671997-1	2.38513138828545	0	1.42189442060465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102800998-1	1.89510464287095	0	1.61191209928171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25310834-2	6.46353930739992	-0.201868921569316	0.742320392721553	-0.271943117215477	0.785665757337638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62665985286889	2.12752229043697
Merged-chr3-138893708-1	1.55772985279742	0	1.53728629701036	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10039026-1	1.40317904801091	0	1.4804314446767	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32717201-2	5.75164635266382	-1.76339802677821	0.819910384287232	-2.15072044527302	0.0314982716187382	0.265894077922499	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20952050217117	2.02668663915985
Merged-chr4-105247740-1	5.91492991848757	0.586201597785909	0.770826220054399	0.760484766260987	0.446964871740902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20189728267918	2.98039756206361
Merged-chr17-84978661-1	1.9287416991858	0	1.38790609074946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20932337-1	5.32672585005548	-2.48462507559382	0.903545514386705	-2.74986155764417	0.0059620448178902	0.0744071391653654	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12728839574024	0.918668513615376
Merged-chr17-3010344-1	1.3567154136745	0	1.62712576509071	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6704963-2	3.89819673382063	0	1.33345523321897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133088022-1	9.29354044252374	2.04581923282232	0.519482109417076	3.93818996984898	8.20985850644839e-05	0.00271361362651683	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04741990613148	4.24974768267758
Merged-chr1-157095725-1	4.64660502868012	-0.319409305704259	0.666932694437683	-0.478922848389619	0.631993515793781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46068761175621	3.29789583421244
Merged-chr8-34895313-1	3.60010278907659	1.93465841882854	0.986736372338856	1.96066393523411	0.0499182387683766	0.370298243904908	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	1.9272926343824
Merged-chr6-148533599-2	3.38579614141646	0	1.3500379950649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149245617-3	3.78718180965124	0	1.34145467026328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-96292063-1	1.63412041902358	0	1.43739427240042	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-47088902-1	2.24763259539528	0	1.44739548941407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143997516-1	2.92244844873999	0	1.45525079796374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92667762-1	2.4366658191654	0	1.40733482661468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47362370-2	2.81269399069347	0	1.35111940559665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41443782-1	6.5386733592049	-1.62887065814203	0.830744942261459	-1.96073496843437	0.0499099476500997	0.370278773744711	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87533882214051	1.41959898789419
Merged-chr10-79835004-2	3.55409586349936	0	1.33949986105384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83929557-1	2.01227456235188	0	1.39945911786823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68875027-2	4.42809151675159	0	1.30995346486688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62385612-4	7.73845335083503	0.686055451022039	0.623448311332033	1.10042073825854	0.271148846821234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88538496950079	2.71411328282536
Merged-chr2-26561850-3	4.92190514870516	0	1.31175758841607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98003332-2	7.46063591585514	0.751976592800691	0.552801459975067	1.36030138711032	0.173734569614463	0.92112447756809	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13130014960308	3.85672575225997
Merged-chr10-60246733-4	6.55081280281196	0	1.2955804954996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111134744-3	4.90799834262887	0	1.32192705853695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96541037-3	3.36882053300701	0	1.35464351461035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35021347-3	6.59999077444147	-0.53798418694622	0.721546748516953	-0.745598518809734	0.455909977938324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39434031937176	1.76550025052025
Merged-chr11-46269142-4	5.41441578349807	0	1.31099062898918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161190451-4	16.050694939605	-1.3033223931758	0.479105930569512	-2.72032197895472	0.00652183780702218	0.0798893049054299	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.12756817707095	3.68165587200898
Merged-chr9-110297277-2	3.71483348275894	0	1.35266558354302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82787573-4	6.16842962330875	0	1.28922038663511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105869486-2	7.86523275368918	0.410078923578908	0.603252355565956	0.679780061851864	0.496643733036055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15229676088732	3.35126154290291
Merged-chr3-16192746-2	5.74939453238609	-4.14982423519409	1.19404120219879	-3.47544475647266	0.000510007024227454	0.0111498558063457	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17033866027014	0.609949614787909
Merged-chr12-56336750-4	6.18432399920237	0	1.31339805199364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58179783-3	8.5919232704525	-0.136828093248486	0.611530845534663	-0.223746838360797	0.822954298001091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78913280742128	2.53487809165109
Merged-chr11-88994406-3	7.87051702631059	-1.40976765316979	0.737841224736244	-1.91066533816098	0.0560476019011173	0.403401981917658	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09276209330725	1.72320011534497
Merged-chr4-143155242-1	3.58136769637362	0	1.31071932289028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151073544-2	4.89907090128747	0	1.31105228334045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-43339754-3	8.35120971174767	2.76727768141997	0.685845134827575	4.03484335004532	5.46387380930019e-05	0.00195211753932493	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61706113751212	4.29588009984668
Merged-chr9-47671259-4	10.7302192551264	0.902118493488603	0.492432019317605	1.8319655467139	0.0669565538276005	0.460129943568665	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73340028784923	4.69902509787229
Merged-chr17-71161773-4	6.72580063908145	1.66803254560481	0.783071368150249	2.13011561072013	0.0331620698298533	0.27633366680714	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917180550409531	2.09311265642062
Merged-chr8-108742898-1	3.02314356361823	0	1.42825987033524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142394819-3	5.07052335186547	0	1.32019055535965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80753514-4	3.98725617072572	0	1.32396801290894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136553367-3	8.28141852119536	-1.2517055643017	0.693180086509567	-1.80574368574915	0.0709583854685588	0.480618277104445	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41101251581323	1.86170925882537
Merged-chr1-16295072-3	4.24220528242977	0	1.35112105559192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11629501-3	4.23838176788589	0	1.32543406889958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89300018-3	4.69828342909527	0	1.31673792483535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161346701-1	3.57117314328237	-2.11957508898876	0.994630762793114	-2.13101702488729	0.0330877396411929	0.276063369672504	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7852230833067	0.683637474991079
Merged-chr11-94716962-3	4.02165286881811	0	1.30318732058865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37105107-3	3.18152421341626	0	1.41408896387568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58343354-1	3.26161490905264	0	1.32142080445408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93543879-3	3.78598215317974	0	1.32225610104399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-140625126-3	4.98412737530795	0	1.31834594495679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108910545-2	6.51665938863144	-1.06643825412421	0.603408864038058	-1.76735596323118	0.0771686329789426	0.511737516809619	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68000523845552	2.27589464621145
Merged-chr9-121348228-2	3.58996082645311	0	1.32339903615606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50201752-2	3.95970247061479	0	1.30760407057994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40476342-4	5.82092096747429	0	1.3147834830374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77444205-3	5.14050486100621	0	1.29796683130084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24082013-2	7.45417264788587	-1.01789313651312	0.745582570352913	-1.36523193672743	0.172180163590977	0.915135738972647	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29330131615984	3.32286782008582
Merged-chr4-133200507-2	7.00537119184451	3.10921985820177	1.07859974437345	2.88264472008371	0.00394351941909695	0.0545267075667181	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.8405601103675
Merged-chr16-33546567-2	5.37737983216535	0	1.34786805567751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91986255-3	4.41261814121727	0	1.36911123771729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41084920-2	8.75955345064617	-0.795871521763185	0.492008008780915	-1.61759871294611	0.105749106651725	0.64737088054839	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36241357503157	3.59615038138748
Merged-chr7-80455756-3	8.57050786299259	-0.844690768281045	0.69790288447662	-1.21032709144698	0.226153406093207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6352754341815	1.72320011534497
Merged-chr13-100517880-3	4.64143346516272	0	1.33781890816031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90490900-5	13.2194935500218	-2.49902430938148	0.612884902271016	-4.07747735361315	4.5526962614015e-05	0.00169419413381288	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29805905565649	1.50690972966086
Merged-chr6-56756346-4	5.74295355725337	0	1.31728104201015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69299873-4	7.33007903667236	-0.352320042157967	0.669596274838731	-0.526167864722398	0.598771579493662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31114996433272	2.49065419848114
Merged-chr17-42857748-5	10.6576474557427	-0.208352285672418	0.534370027323317	-0.389902642399432	0.696608539895057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32469393345025	2.48791958892649
Merged-chr1-182906928-1	2.0686004718131	0	1.43300546752441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56062240-2	4.69501644703311	0	1.32623989060613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22782886-2	3.21833644023284	0	1.35386408944311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137017384-2	3.91771218657864	-0.917064897551609	1.23579673727124	-0.742083928443263	0.458036486611324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903383975461927	0.306240821987646
Merged-chr9-21469202-2	2.30067538698056	0	1.36501515544565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16046081-3	4.58427243706046	0	1.35453349734501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92331707-2	3.87998272510188	0	1.33660845884475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36707556-2	2.06866084432684	0	1.51207117587493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124707508-1	1.85534705541355	0	1.40970677417804	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126599593-2	2.42035722493289	0	1.41610008556482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75872746-2	5.68935675396546	-2.15280196051822	0.72521891584854	-2.96848567166694	0.00299271054496524	0.0443076976537123	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94038626541929	1.50871668602081
Merged-chr1-107506068-2	3.50198402445002	0	1.3431406401749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144294535-3	6.83898518084389	0	1.31415921429836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77288290-3	4.19252394288363	0	1.3479257039639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-7447003-2	4.76882314712918	-1.18419696621332	0.837574224935501	-1.41384122261464	0.157408526976529	0.857954592026715	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12846084648751	2.00098049458557
Merged-chr2-72842031-3	6.47244392188779	0	1.32805391048944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53107751-4	5.18740804298668	0	1.31845088615615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45581576-5	7.78298118684608	0	1.3001168522593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120233782-1	2.60593747300766	0	1.46661221974124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114805157-1	2.83989170309896	0	1.39024051845023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22152961-4	4.93719140031885	0	1.31079863447655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63044282-3	5.08418376615537	0	1.31621113733852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55098550-3	4.06709012398516	-1.38519861076092	0.759630077172108	-1.82351733085349	0.0682250746346383	0.4665474910457	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23571927262292	2.15118048328457
Merged-chr2-148529074-4	12.7314294611652	0.883926483528497	0.569007260855768	1.55345378580776	0.120314761817338	0.711860704075049	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02442262529897	3.76422101948024
Merged-chr8-68175284-2	9.58683365977726	0.452977967508628	0.566359703674958	0.799806138341718	0.423823126045987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9764430646138	3.39186914153004
Merged-chr13-13415616-1	2.98992544253101	0	1.36392237328718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121842470-2	3.61348208967583	0	1.31265252855531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-37279058-3	8.90909896547841	0.731162221325421	0.664107062540106	1.10097040457429	0.270909538043527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08835608813689	3.13178612559225
Merged-chr2-163760870-5	17.5552371798849	1.2176423700871	0.410807882388983	2.96401900325307	0.003036495346228	0.0446998929701767	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2773510985698	5.37180052659128
Merged-chr3-133582177-4	5.97209488145898	0	1.31006910464918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25848189-4	5.35582502166809	0	1.31398486553413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131116121-3	4.5159321372141	0	1.31500205364322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162405753-1	4.15008776781384	-5.08100949055614	1.10396922372213	-4.602491972942	4.17465657551963e-06	0.000251657849247146	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69496132045904	0
Merged-chr9-4380775-2	4.29340708891014	0	1.33187627640963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64100368-2	2.64311597165069	0	1.36629297977263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177726250-3	4.09820631243281	0	1.33201508546316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83440963-4	5.39695475358785	0	1.29522582194235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54866898-4	9.50369162320866	0	1.32822398431839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57761496-4	5.63287705472811	0	1.29708534826413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61894219-2	4.34124151116979	0	1.31089261360994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119968003-1	4.27054883172143	3.81728485807653	1.09278130740253	3.49318279166942	0.000477299670180746	0.010619552008046	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	2.70317705787455
Merged-chr1-159202024-3	12.6419762842871	1.57862694152829	0.573961723200753	2.75040456134414	0.00595217275399623	0.0743265203100778	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6373805948665	4.02198840298032
Merged-chr17-30519017-1	1.39987683500263	0	1.63704573445328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191088094-1	2.56718581214339	0	1.36318382026312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137025310-1	2.9641644059969	0	1.36394230891163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129480301-1	3.02238079967375	0.007143112420956	1.33047126366887	0.00536885885175629	0.995716290992463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	0.469435083901436
Merged-chr19-21407836-1	1.47651477324671	-1.6912583121027	1.41350039700528	-1.19650359892781	0.231500094985513	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.797562664687189	0
Merged-chr1-122193868-1	3.72572949426046	-1.78279722524193	0.845519670087887	-2.10852247240637	0.0349858210139572	0.286992651265132	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86012983449713	1.19380919831911
Merged-chr10-98778504-2	4.19159032799227	0	1.32757858260438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85164546-1	2.8037160533147	0	1.3488829098639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-43624590-2	3.05245804101983	0	1.44002261364744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62761888-1	2.63770741332095	3.49910301765549	1.24896222625718	2.80160836260148	0.00508485608583232	0.0660586492613914	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr5-23419438-1	3.42309598685452	0	1.31429474505301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104606934-1	1.56537679127838	0	1.53951801543474	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35848474-2	3.20964774197554	-0.541894393091195	1.16170899862848	-0.466463110581875	0.640884046708077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11139172742353	0.683637474991079
Merged-chr4-34226676-1	1.67467583215093	0	1.64291351175967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69557269-1	1.29649139584001	0	1.52135437830759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16010033-2	5.39371641786396	3.84690388467991	1.11007275672185	3.46545202680246	0.000529340955544512	0.0114879820926641	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.58180101474665
Merged-chr10-115806121-4	11.1056897263289	1.53419261998862	0.485438827845054	3.16042420174581	0.00157539589580652	0.0269491675935531	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52149925374316	3.89123713795275
Merged-chr1-182907489-1	2.15019692930822	0	1.49519611913046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29838882-1	1.88466530392179	0	1.47488490761512	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-153835039-1	1.28857646686849	0	1.86482667012466	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79324240-1	1.63796690013963	0	1.43993487880365	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-29445278-3	4.55098680625357	0	1.32997500745204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20181537-1	3.49444941752234	0	1.34402785337442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161360751-1	3.06800335313115	-4.27125172786119	1.13902022175812	-3.74993494081109	0.000176880455176864	0.0049701058058835	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08390917296344	0
Merged-chr10-8389720-1	2.95152564849557	-2.63250950633139	1.12397445229229	-2.34214354335414	0.0191733391882451	0.181474655648184	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23951540614126	0.805218875278971
Merged-chr2-3630971-2	4.35394965381469	0	1.31290959341571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88707629-2	5.8087794924528	0	1.31290966671878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97296907-1	5.12335574850119	0.759246413131888	0.702018955210672	1.08151839419214	0.279466582974266	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68804539065746	3.58212787671401
Merged-chr12-91877814-1	2.89575151360486	0	1.39755948472646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97651464-1	0.863473913049	0	1.73347224838773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50364384-1	3.15198090711927	0	1.35156480625495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-89597259-1	2.56234924210316	0	1.39837799076569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100983710-1	1.34845829762174	0	1.61940844961528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84594613-3	7.05290580280685	-1.15220779864373	0.842326830168262	-1.36788685505075	0.171347494943626	0.912243229964658	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28842858567042	0.963545719069792
Merged-chr19-25628704-1	2.42073428512686	0	1.32648944241587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83301839-1	2.48444709892146	0	1.36124645947118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150374827-1	1.04888371292194	0	2.4337943060283	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21759499-1	4.41330514164359	0.639623612988755	0.942715935966641	0.678490294462773	0.497460875519069	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38160740951835	2.09282686802642
Merged-chr10-117939157-1	4.12790214693428	-2.68188020522665	1.05606247391186	-2.53950904560831	0.0111008174690089	0.120199390864384	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7307838812547	0.733321818366247
Merged-chr19-16009422-2	2.98147535517879	0	1.32568748634262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191333083-4	6.34115573797067	0	1.29328651834372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87374324-4	5.22514311287903	0	1.34146166321281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69204777-3	5.76798240083567	0	1.3227160259125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70894228-5	13.9266916389728	1.80138147093234	0.583502828429958	3.08718549964763	0.00202061460665942	0.0326667694425449	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92119054328286	3.37126433462253
Merged-chr19-36818913-2	9.15217170162549	0.437612122128975	0.52977504960107	0.826033846740243	0.40878489201712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52998477102766	4.00186043763923
Merged-chr1-161166429-2	4.61844487289232	-1.64295816155752	0.84400683611525	-1.9466171258987	0.0515806538595929	0.379186568467652	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0431622417144	1.65880184244346
Merged-chr9-90261505-2	3.369795231134	0	1.36484410225611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20655140-2	3.34612335456814	0	1.33757872842514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3742639-2	3.75951103439106	0	1.34567513629047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75149484-3	3.51712635585626	0	1.33274469697469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67506557-3	4.23151366481976	0	1.35119389827741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105815434-3	3.20017287067339	0	1.34120771255422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72412262-3	11.0855407044424	0	1.28939929338866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95800280-4	5.40039227103071	0	1.30392075057437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70074841-3	3.23203784054485	0	1.38935781316422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163751160-4	6.33495419070054	0	1.29923645119385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151963593-2	3.21265226931223	0	1.32607595560148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127586394-2	9.16480838175081	-0.0300604721937896	0.539751945797727	-0.0556931242727837	0.955586277038241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31691104256456	3.2743046022172
Merged-chr11-113335044-4	14.7003201149175	1.76535020092579	0.35396001018846	4.98742838205327	6.11882906180669e-07	5.45485680590477e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58725117822946	5.3001434509998
Merged-chr8-83089809-5	15.3603092781988	0.77736598173867	0.429724353556971	1.80898749466758	0.0704529461629713	0.477921542610352	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72398252619298	4.82378300829528
Merged-chr9-83599680-5	13.4462244931159	2.74410634953301	0.639708648023958	4.28961896639897	1.78979920685473e-05	0.000806594613593995	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83205412421536	4.10776955816383
Merged-chr3-52243835-3	14.6198066549696	1.57207285959858	0.501669006318792	3.13368543760422	0.00172625804273656	0.0289241174514522	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39828452845814	4.89442010935159
Merged-chr2-117962871-4	12.8899164157725	2.16026124084073	0.650729919796018	3.31975090605623	0.000900978005582722	0.0175534010144774	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54604151581852	3.83141759251398
Merged-chr4-153922611-1	1.73561442602816	0	1.46827733661194	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98157245-3	4.35501143908029	0	1.30513640276706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130861794-3	6.59669253666396	0	1.30575652009592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39056094-3	3.92474927136743	0	1.34262318938618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109245801-1	3.6074296586282	-0.942093428532678	1.21076674958436	-0.778096548204754	0.436512097498437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	0.382164212378408
Merged-chr6-84796491-1	2.69759753045768	0	1.38125829795323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-103580379-2	3.7033620313684	0	1.32799024756089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13170132-2	4.00742304992406	0	1.34443350412195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3092967-2	4.96502862858367	0	1.30001832046571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30986229-4	7.10757319630564	0	1.29526197318665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7849979-4	19.4041065993085	-0.475877169776503	0.400075139707442	-1.18946948346876	0.234254972616242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84592768658616	4.07839254932197
Merged-chr6-86822753-2	4.37038927518143	0	1.32023778007846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54601745-4	8.38398731278566	-1.42411260824194	0.894875176386142	-1.59140922200241	0.111517510256764	0.673620190907605	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28595377574417	0.733321818366247
Merged-chr18-61378452-2	2.59607148632093	0	1.49042068675552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167233513-2	3.71861533414011	0	1.31882242480129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90408898-1	1.77594860307117	0	1.38113713965876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110957205-3	4.48460238619202	0	1.32799349551352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145013486-1	2.42269509554863	0	1.36745260644406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97948891-2	3.04031469527915	0	1.3438700437323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35178585-2	5.05501900010992	-0.535494880046228	0.687651230459139	-0.778730345161576	0.436138576755552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11529004268739	2.30437869478391
Merged-chrX-155174849-3	3.73652068815317	0	1.31544396776322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50609294-2	2.66553181777744	0	1.37953538380005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30847693-2	2.301956290012	0	1.46283601800837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28242323-2	3.83244582246333	0	1.31555067681259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82894599-2	7.03254638199405	-1.5487375085099	0.808366584124486	-1.91588511812037	0.0553797201456215	0.399739665595469	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21691720541855	1.32190966491666
Merged-chr6-115470044-3	6.22269475720728	0	1.34283304197037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80774801-3	5.57820307233468	0	1.31845802190459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17633070-2	4.4719091963204	0	1.33284668478943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102516720-1	2.127487688316	0	1.60086883432334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123293193-3	4.16527772419359	0	1.33514228126374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50375812-7	12.5006700298872	1.79254251457437	0.475762040632273	3.76772916181403	0.000164739291035148	0.00470500599299947	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24002522121707	4.2436692631392
Merged-chr1-53820283-2	4.9783883464419	0	1.30112638321579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94074554-2	4.78442907789294	5.06974233806457	1.09961843127998	4.61045594894519	4.0178677506168e-06	0.000244234033517958	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.26673910123384
Merged-chr2-165997766-2	3.5188461112029	0	1.34127641175905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117984770-2	3.44597953591481	0	1.32746249973744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92435065-3	4.62377486326265	0	1.37248421321819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39650884-3	8.65319652652971	-0.714866468290981	0.66194705184989	-1.0799450897065	0.28016663284051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97377715540094	1.57215779683075
Merged-chr11-108104229-2	7.41722189979585	-0.339960389818911	0.647210516953018	-0.525270187850778	0.599395378710154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93687292676565	3.78908037547275
Merged-chr13-60658332-2	5.75883493930797	0.00468836326571813	0.90247923818806	0.0051949818536891	0.995855022829293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3520899255605	0.843323834477631
Merged-chr2-3427635-4	6.92621207923682	0	1.30214369400922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156449251-4	9.07904122611139	-4.14383242461438	1.04097661307703	-3.98071615880552	6.87079529014154e-05	0.00236304731068205	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83375390245101	0.469435083901436
Merged-chr1-160911058-2	5.80352478251782	-4.49167678994121	1.04710098186091	-4.28963095990854	1.78970256049073e-05	0.000806594613593995	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9264092324908	0.382164212378408
Merged-chr8-83767577-4	13.1866475213038	-1.01265397274418	0.520924822928186	-1.94395415263938	0.051900980076713	0.380941417959439	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46420473941008	2.91204565261509
Merged-chr15-73613960-3	4.35620755113278	0	1.3217295701297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41615615-3	4.25002755642656	0	1.38192390310779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31611231-3	4.91340958937504	0	1.3135648818776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106491592-2	3.58716405199151	0	1.31204308239293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20103872-4	16.1794214731365	0.28959135821671	0.432067399387352	0.670245796436701	0.502701114187774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3681622234662	4.63976460151806
Merged-chr5-148332776-2	3.69657509821084	0	1.35623757652254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20370967-2	4.5857987013372	0	1.32090127183807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131678225-3	4.44359274033477	0	1.30935077865141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78402056-4	4.87865185942281	0	1.30953778873012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10291952-3	4.83455625763297	0	1.31877273748911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116777244-5	14.4528017018624	1.52362432684122	0.45594223921356	3.34170470687091	0.000832655922560774	0.0164482266975987	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90160949207525	4.86983385304644
Merged-chr19-41797019-1	1.61324829324597	0	1.43896889532041	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23454145-1	2.80393116776521	1.94249277086002	1.32182905654674	1.46954915330334	0.141683900022036	0.796618568796716	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr9-47899967-1	3.17420441303053	1.39025375843194	1.0549160674391	1.31788092090293	0.187543513482751	0.973408930265594	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49855708990242	2.67936189233912
Merged-chr11-106202306-1	2.77670720697603	0	1.37235095528045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114494219-1	2.04260121125882	0	1.40729506343591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6639782-1	2.91643160221301	0	1.33514709683121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113426104-1	2.21908231319961	0	1.36799835250092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81274489-1	2.53487459542958	0	1.35272005450379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25468112-1	1.9008157601434	0	1.43333393611766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146209553-1	3.12724593054	0	1.3566781528527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179398944-1	1.43678015418333	0	1.59433534158336	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102816031-1	2.84154809172177	-2.31837275267041	1.1024716595185	-2.10288648479449	0.0354756935328172	0.290173322017207	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14356699555553	0.563523181795778
Merged-chr13-76395821-1	2.52938044917534	0.533517187038723	0.997629363944423	0.534784967564813	0.592798559022407	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3880956206354	1.96144955975915
Merged-chr17-25006672-3	6.65348308009911	0.544177860961777	0.553324682628032	0.983469340961238	0.325376497501052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30783487044713	3.76805226183467
Merged-chr8-14952477-1	2.68902106096803	0	1.3249455519265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123468842-1	2.51485520621619	-3.01446889385279	1.27590769812414	-2.36260734086386	0.0181468853462241	0.173772914688505	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47981115784782	0.469435083901436
Merged-chr1-106697740-2	3.03604079040226	0	1.38466110385797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61370946-2	3.85305390626417	0	1.31979578370896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130660145-1	2.12827597481272	0	1.3863630478154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97021960-3	4.2009600544792	0	1.30711667513288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25371164-1	2.48499008001287	0	1.39951031606922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24015973-2	4.54041294864428	-2.1529538075373	0.951231404497373	-2.26333339853819	0.023615144946678	0.21331977629052	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84580595698787	1.11548603074465
Merged-chr7-120883869-4	9.29095407482091	0	1.29649980322242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85138709-2	8.79354961461333	1.37874823654586	0.529021929534388	2.60622132953798	0.00915472842165406	0.103642564698788	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40257350918313	4.1303182756009
Merged-chr8-70585446-4	11.3984345705701	0.883788789848667	0.481112985554617	1.83696723302917	0.0662147327767957	0.456078805600488	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13365984922558	3.7310809366093
Merged-chr2-90552668-5	13.5265523247759	0.594833396013195	0.382844357853225	1.55372120239328	0.120250933349926	0.711585676115205	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10516157483144	4.75975079329104
Merged-chr15-50763571-1	4.5568887481805	2.16018187367556	0.827017068112638	2.61201607193595	0.00900100225549616	0.102345483450087	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.615245439607316	3.08475616112279
Merged-chr9-51028839-2	3.75300018379894	0	1.34066735057409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52690133-3	7.78549699303804	-1.55454321368331	0.740596938725808	-2.09904083097871	0.0358133015519667	0.292203271721166	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70178675162015	1.54028618764495
Merged-chr13-3742509-4	13.4503898684382	1.19534841711014	0.562149859477765	2.12638746938514	0.0334710102580544	0.278304699875662	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67577784597195	4.17752923195499
Merged-chrX-134612678-5	8.92347186644544	-1.05424600686687	0.712659073741066	-1.47931324487692	0.139056614580997	0.785850863652151	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45194318878855	1.26637849737819
Merged-chr19-41475011-3	6.62447778627778	1.5304475460315	0.902127601419797	1.69648677595368	0.089793732446632	0.571506890080609	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	1.35700371934843
Merged-chr9-40764205-6	12.3509087479405	0.298459217629664	0.524104907370371	0.569464649982281	0.569040853895059	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38535587978653	3.69467888719023
Merged-chr1-51517535-3	5.83843315449749	0	1.3121088542026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13154338-2	3.42828303237882	0	1.37698869432467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59246352-2	3.37319235732224	0	1.33650481928926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42477075-1	3.38221101739333	1.41595746429529	1.15230164089584	1.22880799093063	0.219143804768015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.898973605861379	1.38353752608252
Merged-chr18-61065705-2	2.63532870739812	0	1.32766914811214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3760603-2	2.90817164156261	0	1.37190822379133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84127073-4	4.49084953118044	0	1.33074873164119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125514199-5	12.6760775086421	0.896135705893644	0.472737787549453	1.8956295212595	0.0580090507800153	0.414053460652199	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79976377759212	3.85373045979867
Merged-chr14-32509747-3	2.92463841680252	0	1.44089840703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90669650-2	8.67473191405572	-0.163536372737859	0.511716878343046	-0.319583698836345	0.749283933263698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21815155092619	3.18630051868871
Merged-chr11-70472955-2	4.26047429660706	0	1.3336703923953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156014916-2	6.97391325897903	-1.46369672745486	0.850133344707454	-1.72172605223307	0.0851191556654184	0.548864845679142	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13823224270718	1.52944205045577
Merged-chr11-37136644-4	10.024675128678	2.18220397232238	0.563760672459781	3.87079851242738	0.00010847942841228	0.00338362612364146	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16918478579522	4.16830038926026
Merged-chr4-33271911-3	4.03149585709261	0	1.32853129742737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70833651-2	5.96339256787619	0	1.29401754909188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31817660-4	12.482718000541	1.62445103411255	0.429181915136327	3.78499414076325	0.000153712199966248	0.00445233928146917	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19907522421275	4.93385145840596
Merged-chr3-107686499-4	4.86521314665569	-4.34476495004339	1.10496615155858	-3.93203442830807	8.42299988848784e-05	0.00276399702008577	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04617742319939	0
Merged-chr18-67435600-4	6.71370040130988	-1.94439046019018	1.09214418804269	-1.78034226751218	0.0750199637789006	0.501031644339792	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52214007933939	0.306240821987646
Merged-chr7-97129482-3	6.90318050665076	3.13318737792475	1.10340628906216	2.83955910799441	0.00451759247538494	0.0601603011812726	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41083941945204
Merged-chr10-89327100-2	6.39851073022432	0.113261739461955	0.719593212980354	0.157396897884648	0.874932058115414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47101899959097	2.82103665704806
Merged-chr14-121405377-2	3.31234501748875	0	1.32632590529467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72342745-1	2.99790840279761	0	1.33316538003239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97281788-6	24.2088373566603	0.812305718540436	0.370412896998657	2.19297363866729	0.0283092784406585	0.244954728414098	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25776108014638	5.16922178043987
Merged-chr7-44072943-1	1.31648438323541	0	1.72163311468201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59548045-2	4.53610985539081	0	1.33989529636688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75880887-3	4.60624802364255	0	1.31145407643374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118232819-1	2.05245948180905	0	1.38355884021315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43644036-2	2.45330617672761	0	1.45618688018125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137685506-1	2.25049711541933	0	1.36963013265218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51123179-5	12.8829959024601	-1.96468873775713	0.709589969610674	-2.76876621978617	0.00562689943816564	0.0712474854978883	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54804394889065	1.71989966306259
Merged-chr13-60698192-1	3.11787541758106	0.521735122903555	0.937085439747875	0.556763663987703	0.577688912942448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12281912582385	1.21444166002597
Merged-chr1-123905958-4	11.4193334679727	0.825003296290952	0.544483857191995	1.51520249019989	0.129721132657081	0.749035599401401	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12317323127791	3.4863534785479
Merged-chr14-9468819-3	12.1753124653572	1.05754092168484	0.472760495207644	2.23694858687452	0.0252897004902818	0.224474431980163	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59107479156624	3.87019775808559
Merged-chr10-89453950-5	11.9949023432689	-0.855321869946515	0.492467745825689	-1.73680789695669	0.0824210847000295	0.536687376405658	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34781560246011	3.35773193731419
Merged-chr12-79070109-3	9.61294139683011	0.709982772052902	0.593468506186865	1.19632763095494	0.23156873018342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63501670592051	4.31790101127405
Merged-chr5-77252309-4	9.01379039186534	0	1.31872927115369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150341378-2	7.15313641822601	1.96151161994443	1.27072777662406	1.54361276744541	0.122682170163054	0.720739826618264	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr10-39444173-2	4.09274130736369	0	1.32599595062138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5509460-2	4.46502410765787	0	1.36290202721902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5745112-2	4.70065224356869	0	1.34599844891907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15552681-1	3.06674315680095	-3.05780839520897	1.12986623654209	-2.70634549145151	0.0068028230587678	0.0823674774130518	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48822948032796	0.581381506691384
Merged-chr2-59155553-3	5.12748403703378	0	1.31032606984738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162589696-4	10.4896312992035	1.44000569254369	0.530886488370956	2.71245496746846	0.00667868553702759	0.0812710214343771	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00241764017384	4.50262078896786
Merged-chr3-14572152-2	6.83966056740597	1.017103777734	0.626583891870419	1.62325235444186	0.104535470172193	0.642612872424472	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2550028708336	3.69967853707202
Merged-chr4-133622545-3	16.4874528039948	0.280235661125598	0.407751105973249	0.687271369765416	0.491911737025603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5028772742768	4.79954570656801
Merged-chr1-184807835-3	4.36718045426129	0	1.30916080160389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43393411-2	3.87563601687577	0	1.38940556701972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85659546-3	6.84685338764982	0	1.30101949605899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-100286110-2	4.054950573821	0	1.31725827675294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105841714-2	2.8749905124764	0	1.37163884989069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46365148-3	4.78075072270082	0	1.31818777742804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125439403-2	4.17623797369025	0	1.32901320487273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129504559-4	10.1835547889261	-1.14293244848247	0.686711521626244	-1.66435601047703	0.0960413054083808	0.601314088647701	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63679249778256	2.37232581226066
Merged-chr15-74924948-5	13.5698415915763	-0.395525946978696	0.504919790570758	-0.78334411596661	0.433425063475971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85949239430013	2.74485414442757
Merged-chr10-19064974-4	5.75028726889419	0	1.30211198974972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72123770-3	5.68212461027	0	1.29602896886302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-47917794-2	3.42899366694385	0	1.33177526083079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93265979-1	2.75653499453474	-4.06144669176703	1.31347935606467	-3.09212830259897	0.00198726935737784	0.0322473562024367	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94866679930349	0
Merged-chr3-16043494-1	2.61298430284451	0	1.34722998844211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108326592-1	2.34505374948819	0	1.40754369161436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98519057-1	2.3445780993473	0	1.46285866426451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72117931-1	1.66927480620838	0	1.45035796158894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77369732-1	2.57612236085428	-3.03064128604409	1.19791698478585	-2.52992596693659	0.0114086596248316	0.122576499809971	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98505905188545	0.688405034366054
Merged-chr1-172246447-1	4.46324171472252	-0.357208971514942	0.902357058226158	-0.39586211273965	0.692206752332211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.007486127095	2.01529308791303
Merged-chr11-116220650-2	4.75828826317232	2.71511978221965	1.05026424312228	2.58517777787808	0.00973287988457646	0.108700182693135	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	1.88903407179563
Merged-chr1-160191445-1	4.65967587049193	2.37628104188069	0.971080442044857	2.44704860585681	0.0144031413795941	0.145402081969868	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57416491915831	3.14254818007094
Merged-chr1-151657284-1	2.24366752820233	0	1.35761677198984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48526586-3	3.91382852338588	0	1.31814729810628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34267299-1	5.03939867127544	-0.927217017275797	1.04017424726085	-0.891405473378613	0.372711682444937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05078537325626	1.84231959469675
Merged-chr12-98320186-2	4.37475883374977	0	1.34190787264347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34005624-6	17.253131487799	1.1933992901634	0.443389850526171	2.69153497480196	0.00711240403170609	0.0850131980713126	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74474223712496	4.63721856493712
Merged-chr1-45922502-1	2.25750392054636	0	1.38363662306989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15345790-2	3.93757908966924	0	1.33708278051925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123065678-1	2.66642490234146	0	1.39407483070976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67651773-1	1.91317120025414	0	1.60510924867519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102617802-4	4.8026900990163	0	1.3188187998793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50360837-2	2.54865454672672	0	1.45942139767508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72027134-1	1.6464065104057	0	1.40702557310683	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77537171-4	11.0806419568905	1.07142653217425	0.483766407381124	2.21476009046273	0.02677653589264	0.234623762104785	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36962127051639	4.33817778327621
Merged-chr13-113970964-1	2.09551131414996	0	1.47083128469051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77245706-4	5.84071753467382	0	1.29995057604438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146011390-1	6.84867765499075	2.08474451021599	0.646584265629693	3.22424256362889	0.00126306363794755	0.0228063433228296	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8562338371899	3.68068546412884
Merged-chr17-14921790-1	1.96867469191892	0	1.41780511227914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133170720-1	7.19111715666383	0.808923110380643	0.628053765663182	1.28798385521417	0.197751583252548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0776978769698	2.46150677299309
Merged-chr10-48301086-1	3.88919642581075	3.28355913205321	1.47675654089425	2.22349388076172	0.0261825155560514	0.230474940024915	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.9699838995169
Merged-chr17-62544390-2	3.86017989009102	0	1.31097946687438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61325089-1	1.93352485811239	-0.594016292441167	1.24922017620072	-0.475509684968233	0.634423731789957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93285590670577	0.887107926668329
Merged-chrX-163869104-1	2.30460049376999	0	1.36898957433908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55956562-1	5.4673626738204	-0.0445547253853609	0.629933716199219	-0.0707292279165295	0.943613258570616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10983570683382	3.21259055339526
Merged-chr12-69733718-4	4.56292013022534	0	1.29940203481401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152617995-3	8.37612498444511	0	1.30286906369156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70194820-4	4.86487769973346	0	1.3048568489774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102622618-7	19.6979885717653	0.691318045398281	0.335218288350651	2.06229215237546	0.0391799297210043	0.311693655654827	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01379385220184	4.68743504909081
Merged-chr2-174672663-4	7.69050103904923	0	1.30055435671767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121637981-4	5.35557209681018	0	1.30474957776774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115367014-4	4.645089130662	0	1.30789613206781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155182604-2	3.49209066192208	-3.60395278222293	1.05671941719267	-3.41051060819661	0.000648413616676477	0.0134854348171041	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70872240488264	0.61242769162773
Merged-chr17-47766224-5	9.00500261358067	-1.21047409719742	0.665598094107663	-1.81862614678944	0.0689684859734351	0.470047422238224	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04259642379752	1.47954504644696
Merged-chr9-90380255-2	4.2088452601666	0	1.3402829415208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22842580-4	7.15500206714076	0	1.30065515959977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55525670-5	15.4475189940696	0.569379630867882	0.433155531473517	1.3144923462733	0.188680572068739	0.977275266285487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92901173495467	4.41879657009303
Merged-chr6-117580921-3	4.41572283125524	0	1.31320301940014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13912431-3	4.29746899088426	0	1.32586611355031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100195630-4	5.86750269364302	0	1.30516839240222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80776270-7	15.306500804117	0.748575306827505	0.43964978889172	1.70266272324282	0.0886312046585536	0.565760935783711	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52823182668803	4.407530124948
Merged-chr9-83557537-6	12.7408921188303	-1.62488152117663	0.618645759376452	-2.62651363328569	0.00862645367434394	0.0988607930206382	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61251397021119	1.94320493631125
Merged-chr15-97884401-4	5.58613865619354	0	1.30729868219623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154907946-4	4.87942002290075	0	1.30203459094831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113289390-2	2.50737267137928	0	1.40613825393424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49425779-2	3.31727034176513	0	1.36586781789724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87584860-2	3.17832780871443	0	1.34571298147543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42744405-3	10.9274613339684	-0.362778191970156	0.641550599855867	-0.565470895127616	0.571753515283238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93092455303744	2.24517688100283
Merged-chr4-5688280-1	3.10771295036646	0	1.35734605384797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70621501-2	3.60951326965989	0	1.32387841457354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59969490-1	3.35101824369184	0	1.30920812251656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129404005-5	9.20289696319617	0	1.31032771180216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82670786-2	10.0887458874001	-1.49132721742262	0.673364082741066	-2.21474126055531	0.0267778290603478	0.234623762104785	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.25011527537658	3.23819148409518
Merged-chr14-17404207-3	3.88838589015382	0	1.36059478766793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57196740-1	7.30584228514449	1.68576104984178	0.959157493773984	1.75754353251085	0.0788252085505351	0.519821584210643	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32716660593562	2.42930447891152
Merged-chr13-63098274-3	6.50958460608155	-1.78201690404162	0.892136036090069	-1.99747217010939	0.0457739147231129	0.347524367549266	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9783083103711	1.35032549026822
Merged-chr1-136600318-1	3.61922437457489	0	1.41140298921343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60887147-2	5.51680124023519	0.702129017644092	0.820668194957954	0.855557729613325	0.392242459471723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.824174958601894	1.69484321481316
Merged-chr5-81078193-2	3.46313683246608	0	1.31359096038448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154714204-4	12.5973107738097	0.219811973698946	0.413865015034079	0.531119968381106	0.595335647595911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96068230842042	4.26046834263776
Merged-chr10-58452456-4	3.84940078259362	0	1.34543299984672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78744473-3	11.7717311647187	-0.0282405804149065	0.532894654066287	-0.0529946776523557	0.957736148374491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12707027212834	4.05096235098197
Merged-chr10-93370873-1	4.0001195875286	-0.450733271202355	0.998827018714649	-0.451262593779638	0.651800301197453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40329033126304	1.94283950978213
Merged-chr19-47242442-2	3.20733454756164	0	1.38497319480934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103474451-3	5.1558653498418	0	1.31903362535764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84229134-3	7.30291351291973	0.848974394064783	0.706718201372564	1.20129125359434	0.229638242027124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4937904306168	2.0900981927122
Merged-chr13-45372342-3	8.891808808893	0.157295578697624	0.585946869749016	0.26844682823376	0.788355398071779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34699929520936	4.31057003271448
Merged-chr1-59895629-4	5.77531121909905	0	1.29668209976655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39173028-2	4.96509232565296	0	1.69313695277971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-44215790-2	2.18923679036193	0	1.50082659256294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51811961-2	2.85814196180912	0.886572504502928	1.36972396877228	0.647263627355215	0.517461337710865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.61242769162773
Merged-chr16-24016501-2	2.7848942335425	0	1.3604462872924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83639820-4	6.47870555320241	0	1.31225089452306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95565649-1	1.9665350888287	0	1.50300685749066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114893909-1	2.27540537446514	0	1.46336659432841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142408533-1	2.06603612992631	0	1.38917987969796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16035629-1	3.56522897273837	0	1.3649426865892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121307752-3	5.68449460285587	0	1.33708761468103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102713362-1	2.61590165843217	0	1.3815707502099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64143361-4	4.94882799873958	0	1.31994912189702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37340151-2	3.03334597525664	0	1.36361725574896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106673091-2	3.79151743272067	0	1.32395729750692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86041031-2	4.20524111177159	0	1.33823287965521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31440919-4	6.1592835081101	0	1.29514304986686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38227900-7	13.5562981792494	1.0798296995127	0.519673162149467	2.07790160847699	0.037718422357597	0.302831800882115	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97813549388211	4.21439454194604
Merged-chr2-90894475-3	7.57083566338559	-2.07995368158775	0.730777361796034	-2.84622073742931	0.00442415153533332	0.0591812909371322	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92529013293272	1.26428495695095
Merged-chr7-46059155-5	10.019158130766	0.116355001343599	0.468326174200961	0.248448640612751	0.803787303258446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44759206309324	3.53041829676374
Merged-chr4-155095470-3	4.72739586722513	0	1.30861298431696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146921413-3	4.64462246007256	0	1.33159441408318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121718612-4	7.09837372380596	0	1.28931311868487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12213793-1	2.87184341746492	0	1.37002193662678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72376226-2	4.39868612069294	0	1.33301193125033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28189893-2	4.73984837144684	0	1.32603445644281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80408719-2	3.31468955794385	0	1.35806911819632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55101927-2	3.01569222681546	0	1.39568711572327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6178624-1	2.29499636964306	0	1.42171781141146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111083684-2	3.8425753084783	0	1.34657499597684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144447280-4	5.71606054728665	0	1.30086433630675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72685053-4	5.88628787119479	0	1.30099997903682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55767558-6	9.36141703519614	0	1.28577565903864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73007602-3	5.30348651082974	0	1.30767156542796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80177612-3	9.48484672033804	-0.362853588943259	0.786303053820239	-0.461467861761876	0.644462973833883	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9440418547608	2.09282686802642
Merged-chr12-80668495-3	7.78599089172474	0.477181607951448	0.690747653390873	0.690819006925277	0.489679289498822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09788086439666	1.95915187330271
Merged-chr18-9841233-2	2.70309002909182	0	1.38684638834221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-66999412-2	8.13064138380387	-0.385915362202897	0.804887821634346	-0.479464779848806	0.631608018251892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8084150078135	1.42690496303314
Merged-chr5-139373014-2	7.23433860370755	0	1.30883272785405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104789871-2	4.47996391287372	0	1.32721984392336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24335980-3	4.4410092108528	0	1.36128392381655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101217393-3	4.91705110688036	0	1.31415519138771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88426640-4	4.58708136329436	0	1.30465288241831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174564071-3	5.01057677940598	0	1.32257856824823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44669126-1	1.48697741532188	0	1.52901318030103	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80937890-2	3.18249284036127	0	1.36679809187767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29370318-1	6.18934487856464	0.832890809593424	1.00387341537598	0.829677125458574	0.406721357818034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71211778236583	2.90215462453103
Merged-chr10-26833604-1	1.6300596534462	0	1.45693857547611	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28511257-2	3.16219434285876	0	1.35643873972328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116844039-1	3.47506529031443	1.43483138528433	1.00410484462014	1.42896570310556	0.153014091279813	0.841725634209165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	1.96491903277391
Merged-chr1-191585925-1	2.42089762048888	0.580699234866547	1.43361375172854	0.405059754879156	0.685433588086229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72953260749044	1.86961804807321
Merged-chr5-99489846-1	5.07224499141051	1.0336905085703	1.00014720341643	1.0335383681915	0.301352024713702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21223451045417	3.56835140040331
Merged-chr3-138752912-1	2.59075494879963	0.283085391236203	1.53309928601935	0.184649092082762	0.853504278046749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	0.733321818366247
Merged-chr14-64329750-1	2.61319221128063	0	1.37815748080816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17175418-1	3.8030699551427	-1.81497435395428	0.959704147009024	-1.89118110993972	0.0586001720782855	0.416815809799461	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65952933232508	1.88639437725876
Merged-chr11-109371374-1	1.99835872472706	0	1.49835125262548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75935944-1	3.27207236810641	0	1.39922948790001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6629892-1	2.24108889091308	0	1.3554961003612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145025336-1	1.03620246717316	0	1.62125926816913	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76558188-2	2.88473937462767	0	1.36359807696404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66098423-1	3.07650437432344	0	1.32644576327006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-35948411-1	1.97217769955901	0	1.45327732925729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55806767-1	3.90525162678357	-2.65973530196403	1.21105490008112	-2.19621364959249	0.0280766548478128	0.24342537981759	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52856413299132	0
Merged-chr15-99500388-1	2.81687654009273	0	1.33195857272387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110679990-3	5.70562984240257	0	1.32008988148639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58067341-2	8.13874556955329	2.9564771226818	0.84198432759529	3.51132084741471	0.000445885888509227	0.0100959318331684	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	2.63003640177516
Merged-chr13-94387063-1	2.00078677846091	0	1.39903633613137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68996450-2	4.57834278943423	-0.384425640670546	0.962447634974985	-0.399424993839315	0.689580080663455	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64306070357648	1.11548603074465
Merged-chr8-111638661-1	2.49595655638796	-0.332650273039442	1.03288283015615	-0.32206002784377	0.747407219388394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56734912225775	2.03951848988522
Merged-chr6-134043793-4	4.33886703980447	0	1.35962843710265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45207499-1	3.76632569426458	-0.514264614489866	0.682552308364388	-0.753443521013368	0.451183438518349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29842537553821	2.2156323711225
Merged-chr8-125279087-1	2.77443471337561	-2.15491948371653	1.1539197731879	-1.86747773440367	0.0618349033133963	0.433361603594723	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45987909615112	0.793480537552656
Merged-chr8-37010890-1	5.26383594805031	0.986751387743138	0.868073012771048	1.13671473853708	0.255657555979084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97531506906462	2.09435608719793
Merged-chr8-84567780-6	20.4649627294308	1.56563869111344	0.423639867926399	3.69568307812202	0.000219296388149189	0.00586880615786086	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38457982532252	4.09445711478796
Merged-chr17-73882366-3	4.78963106475635	0	1.30790586161672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102381770-2	3.5103305841204	0	1.32850153587079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95216208-3	5.66948038900596	0	1.29611643684179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79503881-2	5.00739357580941	0	1.33145485883717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167695722-3	6.42784495937892	0	1.34384483359153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156532916-5	14.811519160022	0.642097842633412	0.485787105804553	1.3217679822316	0.186245423094256	0.968209500200261	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99491624858585	4.26768156452924
Merged-chr7-38074038-4	4.78018508918412	3.13692569458519	1.11856981744522	2.80440759768562	0.00504091343066389	0.0655921005655441	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr6-15626337-4	4.32998174674941	0	1.32270520032271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170307679-4	5.60233059470225	0	1.31342569993524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88099667-3	4.98839785033106	0	1.42305609047599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52048299-3	6.44292965249755	0	1.3354639765406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124790270-1	2.91945460263956	0	1.34547565841943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60532017-2	7.64873952061243	-2.39184002457625	0.652731366432429	-3.66435588601955	0.000247961807994043	0.00644523162497165	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62886613118779	2.19127296633573
Merged-chr15-41751549-2	4.80774591392863	0	1.33412616265185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85646273-3	12.9049952150003	0.82045676846063	0.422598409378188	1.94145730379783	0.052202833439918	0.382340994616104	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17800742973398	4.0859766513599
Merged-chr19-61151868-4	13.0389575399768	0.838440252531257	0.583080968816532	1.4379482393895	0.150448741005034	0.830550260176985	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66285439612659	3.67590589065554
Merged-chr2-34610540-3	7.98133418671329	0	1.29723504337822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94167473-3	4.10510913634319	0	1.31398524875343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28485519-3	3.45970042728779	0	1.34123858419176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29297234-3	3.55950085550455	0	1.32291406552095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50774565-1	3.6471946365362	-4.72192695435522	1.15218015034824	-4.09825403859635	4.16278267738052e-05	0.00158243860870336	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45721140707936	0
Merged-chr1-64088915-1	2.68063875296052	0	1.34809707912288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52541512-3	8.33983672194065	1.90768036622965	0.730987315367879	2.609731148713	0.00906134055856132	0.102816871008812	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30026633713165	3.24095438322535
Merged-chr19-10023437-4	8.46306066010664	0.817019533463874	0.665068270698086	1.22847468366863	0.219268827259766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02739165905392	2.71289398303961
Merged-chr4-86555240-2	3.31817192364239	0	1.31495129395661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4944658-2	4.4714244060166	0	1.41191899412504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104655165-2	3.74551333395127	0	1.31571872183741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138028113-3	7.93732423104224	-0.568141443152906	0.615493241304216	-0.923066908011902	0.355972338537582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35585158838979	3.12496497634643
Merged-chr4-133905378-4	4.15851381442456	0	1.32329444873791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109685900-3	6.7637168823349	0	1.30380243459531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12435986-1	11.2253027770606	-0.294195585188642	0.477379258429782	-0.616272240558427	0.537714856795676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81203561487716	3.60864683942816
Merged-chr15-81421728-3	4.39618861017591	0	1.32568853160601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125620234-7	13.711491389602	0.11141813114707	0.477392653810415	0.23338886817332	0.815459456438978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63252782184638	3.79024521644104
Merged-chr2-129408648-3	5.59582625448114	2.98012484670728	1.2072492818988	2.46852484519192	0.0135671233523519	0.139330071127265	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.735627456805112
Merged-chr11-17906657-2	6.61366013832071	-1.12543945485329	0.652961906554167	-1.72359129002257	0.0847816520208438	0.547390755157994	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17162130134841	2.51985556593347
Merged-chr12-112797780-2	1.91895064817756	0	1.70179247582225	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89423309-4	11.9472431064381	1.16646430744134	0.470370473670789	2.4798842034837	0.0131425055941728	0.136016980461185	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87299560791838	4.12782230264024
Merged-chr12-51844221-1	2.83896202107243	0.627140620233184	1.16858236607316	0.536667879338787	0.591497047190688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.930068803098547	1.34574950999398
Merged-chr18-12947328-3	3.27151246011447	0	1.3341255214206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82974062-1	3.37914067944995	-2.68524260489346	1.08220171201095	-2.48127735808486	0.013091246425085	0.135722765174299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72209034873267	1.03956264035389
Merged-chr3-51718151-1	1.81025599654534	0	1.40300970288892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39427098-2	3.70612597626951	0	1.3554052897925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129501005-1	6.9832402619585	0.158718494542874	0.778892336691418	0.203774625922087	0.838529622368608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89150196056017	2.00098049458557
Merged-chr19-21457590-2	5.73126004423283	-5.29201061311091	1.05290812341481	-5.02608964203617	5.00581965546966e-07	4.65306246381679e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99468917555996	0
Merged-chr3-59235063-1	2.83428387719957	0	1.34173065088596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111401620-2	3.69525734690927	0	1.33411763068083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27759957-1	2.51669539297079	0	1.39478792547626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160910629-2	3.20193428579391	-3.67156819025317	1.27155775032353	-2.88745689239752	0.0038836981946432	0.0538775633580138	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7019458972691	0.306240821987646
Merged-chr6-113099803-3	3.10170677191667	0	1.36586953030773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40057749-2	3.77523991233884	0	1.34292934936474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88631176-2	4.22333141858422	0	1.34079118370316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159783436-2	5.49026235009633	0.333586830366327	0.978037971139711	0.341077586157107	0.733045174259193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05701419036887	0.989878296978726
Merged-chr14-20105716-4	5.14655396042694	0	1.32405847884356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20493876-3	4.43967166221354	0	1.32955789583105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21837808-4	4.67887772914605	0	1.31440675396923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5697432-3	4.83583986279448	0	1.31384428020158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127781051-1	3.82753764566035	0	1.31033724378078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5787323-3	10.4282686439183	0	1.32905597114285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96406728-4	5.82456756260075	0	1.30628843509557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100818719-1	2.55328042875214	0	1.38402288596371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121442502-2	6.91992871765181	-1.83662514663597	0.758528459493038	-2.42130024740729	0.0154650979192437	0.153350878396191	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83000486641518	1.58180101474665
Merged-chr17-29437076-4	32.0104102417073	0.31586665060569	0.372352873120964	0.848299216703174	0.396271353720007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18663228259873	4.37432084987782
Merged-chr2-164972921-3	4.90479661994159	0	1.32130809962576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86683483-4	8.94248057110747	-0.0405848519120291	0.564441265976772	-0.0719027015889714	0.942679340059875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09947394229536	2.56043926935404
Merged-chr13-99375867-3	7.9939068216965	0.837635394602679	0.578127554304028	1.44887644321167	0.147372090831603	0.818461626939409	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12733098491548	3.32438546487441
Merged-chr6-134534957-6	13.5664622335696	0.824915645964879	0.45531822625434	1.81173429570571	0.0700272617178714	0.475675825802082	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65012097953271	4.39421613905404
Merged-chr18-46153224-4	9.9125873810931	-2.2805459638398	0.693207065711861	-3.28984812279414	0.00100241472848566	0.0190528775007633	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73820600391282	1.24302299519605
Merged-chr6-116014333-2	3.63587323385726	0	1.33682884942229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76304857-4	4.36631576899917	0	1.36026885118787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105674793-2	3.99870731762466	0	1.32453818003273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10171995-4	4.87561389067185	0	1.3261240058714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56350896-3	4.89103104695563	0	1.30301660618396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171703306-3	3.48562889619346	0	1.39146617007752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124480449-3	4.04693114523329	0	1.32904039539616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102528425-2	3.73221265485817	-1.63328540946676	1.20403271010442	-1.35651248986841	0.174936164155872	0.925048158198776	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97313474263035	0.73596151290311
Merged-chr13-76415554-2	6.57131229736631	1.0330784751326	0.80627263594449	1.28130167027487	0.200087726451686	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22710611104283	3.06270802590511
Merged-chr4-105142219-2	4.81405513560798	-2.71043763953379	1.21074861053417	-2.23864608718235	0.0251789530043245	0.223825855396625	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98361809192315	0.729295484888209
Merged-chr11-104387555-2	3.97053358108913	0	1.32592404028026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30246033-2	3.56346584974407	0	1.32780150298598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37315206-3	4.65973779836803	0	1.33631515978261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128059289-3	4.26671884603612	0	1.3166635036006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87207049-2	7.06792380566121	-2.09779556601039	0.942778474393404	-2.2251203469194	0.0260731601752577	0.229743355557226	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69573882238	0.733321818366247
Merged-chr2-125594181-2	4.65074061935131	0	1.31005302354998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134052075-6	9.99378172032019	0.566450914882867	0.502313328924916	1.12768441979277	0.259453219842972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46933006171003	3.85744556612048
Merged-chr10-94005449-2	5.37030973249243	-3.47949231050665	1.15568704248504	-3.01075653061299	0.0026059771509584	0.0397967242127898	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93391639395205	0
Merged-chr8-119813648-1	2.8205797428014	0	1.39234846619391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95637271-1	1.74602139247133	0	1.40943428628303	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80950787-6	28.2333093952539	-0.908198854109366	0.351927988852477	-2.5806383205573	0.00986178405618396	0.109799266090695	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.02423918692094	4.91450566169499
Merged-chr1-138124228-1	2.59189977628921	0	1.37327838398898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23489526-1	2.96831406947702	0	1.34109543755851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137224480-1	3.23132756875036	0.083759202660627	1.21595221787942	0.0688836299889318	0.945082248941582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64820197242954	1.54311005189624
Merged-chr13-95489411-1	2.71248259537743	0.0910852833295241	1.46911316026251	0.0620001820099745	0.95056268705888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr2-90573607-1	3.81692316091241	0	1.31731494111931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5362147-1	4.00620745955989	0.246109226812947	1.10649341665772	0.222422676093586	0.823984860925808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58046429456988	2.03996640867281
Merged-chr10-117807676-2	5.70071625183183	3.36874063487027	1.08839093864707	3.09515681842942	0.00196708863663111	0.0320298265881776	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr17-25168082-1	3.11504358415267	-1.76799580096484	1.22450538498618	-1.44384485576174	0.148782621177856	0.824556794460877	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71585083597635	1.15307255889252
Merged-chr8-37886977-2	6.35344464438514	-0.851967343081606	1.08317040331817	-0.786549688277763	0.431545521145282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29618753786787	0.890396206374751
Merged-chr6-96116882-1	2.9136482448151	0	1.35606690011597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113864963-1	1.52047842477619	0	1.4726214109674	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119283616-1	3.08898912117941	0	1.35481134124276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117054708-1	1.97945942808437	0	1.41369073192626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141467453-1	2.83419538627923	-3.23630140374621	1.25906061249625	-2.57040953519292	0.0101578353038185	0.112256706538699	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75788056556668	0
Merged-chr12-69215200-1	2.60757484161309	0	1.37189070818171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76642414-2	3.04678834099842	0	1.37208444697159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8347854-2	3.54653734783355	2.45167157414767	1.27376591840046	1.92474263813432	0.054261563413006	0.393319592100531	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr15-35305237-1	1.54840519210933	0	1.50498964236281	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78363756-1	1.75259343654755	0	1.46956275194436	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98985643-2	3.65265520491104	0	1.40136624063419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64304298-1	1.69915961550263	0	1.43756636760588	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146386408-1	2.02830459143382	0.327784996822336	1.2474637386778	0.26276114219541	0.792734687376517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903383975461927	0.73596151290311
Merged-chr17-27825711-1	2.80688234135632	0	1.35140847672763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19304772-1	5.37472741429109	4.03718885840441	1.14666188332279	3.52081892415004	0.00043021629296058	0.0098193901082089	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.74371842151223
Merged-chr10-75827835-1	1.47753361538538	0	1.68179593222722	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101730220-1	1.68161862100525	0	2.10515056013947	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34350210-1	2.61276371311428	2.15356426003654	1.03661713755682	2.07749243381431	0.0377561328484485	0.302996265118684	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63129044052244	3.46894688797797
Merged-chr2-103009904-2	8.90958955979992	1.07125936805696	0.676622166637874	1.5832460431795	0.113365395761106	0.681193117370595	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83112050088507	3.63780431868707
Merged-chr15-98877456-1	2.85781989321938	0	1.33947878043569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3471584-1	1.82578752753955	0	1.46600913471194	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122501058-5	10.0604013302529	-0.11221042078929	0.440416536295099	-0.25478248780855	0.798891101716746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67117270105957	3.42866575664238
Merged-chr8-108767270-5	9.67569059003946	0.276826971327988	0.548299335815965	0.504882922967654	0.613641069071468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10977575114084	2.66828971316851
Merged-chr6-122595854-7	15.0415147011414	-0.419904682013495	0.485771396388179	-0.864408001655885	0.387363798795359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60789503357395	2.04975140380142
Merged-chr14-48138017-3	6.5043546907914	0.400290948690751	0.602255571635006	0.664652960543046	0.506272486996917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38864512760439	3.64629956476548
Merged-chr19-37070080-2	3.91252006724049	0	1.33233917876883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33313834-2	4.03020010100614	0	1.34441167004103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35578386-3	11.7136375939978	-0.585747355540117	0.529455266115587	-1.10632076594029	0.268587706756502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26837659898083	3.11770517651893
Merged-chr15-59951113-3	4.53460200144478	0	1.31442464146641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16696003-1	6.03350336504818	-1.09230089269177	0.603471614784793	-1.81002861763648	0.0702913493806004	0.477221664064905	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80552998885055	2.75275814396443
Merged-chr12-34847476-3	5.9184184351512	0.614322297646273	0.840769453550039	0.7306667660824	0.464982719822863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23484466045373	1.47158896970822
Merged-chr10-121510051-5	12.9218016681329	0	1.27962899421246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55781813-4	8.03043800622221	-1.54170233219657	0.723925907945738	-2.12964105204	0.0332012591045621	0.276554426698115	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06210539749157	1.27663763006505
Merged-chr6-38736461-4	6.42055413503603	0	1.33392537785125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108640010-3	4.6475313819086	0	1.33444800080883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45309649-3	3.52069049210455	0	1.34137295253876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126117101-1	3.03355723368767	0	1.34975750992635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108611868-6	10.6609822243678	-0.894233544138706	0.576727564652351	-1.55053026584181	0.121014294951944	0.714474170394806	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12693163074903	2.92435819090246
Merged-chr19-47314535-1	3.00359069694166	0	1.34373240938843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24738047-1	2.71260662984357	-3.8507966081199	1.33835080949582	-2.87726998093315	0.00401132236055335	0.0551143547041042	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33510298061476	0.306240821987646
Merged-chr8-36193646-3	8.72036264644121	-1.22063271446368	0.541152015386483	-2.2556189014503	0.0240945084395339	0.216691295266914	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04201740115307	2.98445054292691
Merged-chr13-91093361-3	4.17756767306388	0	1.32849751307484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145870408-3	8.97897481221099	-0.938002213222118	0.691097983456313	-1.35726371032222	0.174697433688313	0.924413482172316	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01491527784809	3.12353481051359
Merged-chr19-32278023-3	4.33519038979711	0	1.31614902240425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97174349-6	10.8049274670386	0.224458293378593	0.562762692039881	0.398850699510632	0.690003217305667	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11139643784493	2.70654711254048
Merged-chr7-92962019-2	4.35270982052036	0	1.31054989082193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65332086-2	6.46465042795224	1.25486126993761	0.899216042065169	1.39550587537969	0.162863344284978	0.878453825476366	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19904754646132	2.45916162824808
Merged-chr2-18607270-2	2.77143365641726	0	1.45464719016746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3506129-5	7.04120723591449	-1.11169489540987	0.937505878257418	-1.18580045330086	0.235701112469291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11616738747217	0.666688015277142
Merged-chr7-67242602-1	3.22960156293924	0	1.39378653682296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54760307-3	8.03749257191833	1.1134765994358	0.528077795981702	2.10854652081298	0.0349837431954953	0.286992651265132	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7110928977493	3.74711490625425
Merged-chr3-103781680-2	3.31303842400764	0	1.34825584806199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164953403-4	10.0747784335811	0.321353916306718	0.571720024547306	0.562082667230643	0.574059697026647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88138295530233	1.96687887873989
Merged-chr9-3015721-2	4.39470706302854	0	1.35479293979872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106443411-3	10.6257677792094	-0.270650358922581	0.472654200683241	-0.572618118132336	0.566903289422088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17483900932558	3.56364292920187
Merged-chrX-18239790-2	3.0005740597324	0	1.33878665281578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-49626772-2	3.2858288301578	0	1.34148578698577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4018746-2	3.53628144416779	0	1.32497852566677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99009331-2	2.92452356275145	0	1.35284090775403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125386857-3	9.15382918180859	-1.87335874481931	0.574984329687781	-3.25810400056738	0.00112159293366625	0.0207331292343295	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02318089927426	1.63879159991986
Merged-chr3-88609828-4	10.8261413963493	0.120569077621662	0.440319346781541	0.273821894275023	0.784221497242995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79338547178675	3.75731004104476
Merged-chr7-38064653-4	9.80811176260273	-2.13212966379214	0.625710023813262	-3.40753637091877	0.000655521716073427	0.0135922458352788	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09479711304182	1.64730971531962
Merged-chr1-140351838-2	4.34407634430533	0	1.3505925344552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33043007-1	2.77375363666691	0	1.32580947141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3247557-3	3.79877019449875	0	1.3241742513069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48790429-3	5.0243328041739	0	1.30885871445275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91656888-4	11.7876310168355	0.502057111868701	0.479923219440389	1.04611965316894	0.295505792498529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51909166919668	3.88677862237725
Merged-chr4-122933385-2	5.51297323037313	-0.699335339446411	0.743597532033596	-0.940475605848051	0.346973656716546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38927644873943	2.39487633519123
Merged-chr12-100841387-3	5.72196057776862	0	1.31721253004226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63952267-3	4.65091282302383	0	1.3123091972251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86884471-3	4.48530516521718	0	1.32760580770841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167950377-2	3.52633104623431	0	1.39508306749231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45620942-2	6.13187031029705	-3.1849843310312	0.997182625808638	-3.1939829762361	0.00140324391991172	0.024656191769441	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44974216132859	0.869764003783424
Merged-chr14-31781732-4	8.93593969534022	0	1.34069671583825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79797238-3	4.74025919678226	0	1.31251684933759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67892385-3	4.11994296249657	0	1.34677923970952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35552783-2	10.6883652620198	-0.030461269358192	0.484296332300975	-0.0628979972106443	0.949847729683025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19855146371776	4.07452906206666
Merged-chr15-78610638-4	14.8769321417086	-0.4584103956341	0.438790390056112	-1.04471384520404	0.296155243923997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.60188220617301	3.99208859500335
Merged-chr15-59787350-3	5.85482942494694	0.433410051508332	1.18828369633126	0.364736176088635	0.715308351573039	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0.805218875278971
Merged-chr16-21216198-3	3.73868497091495	0	1.31585256407567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177703037-3	5.11853908385363	0	1.32221308732225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53939546-4	4.66930392305774	0	1.30947130251738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76519059-2	4.11901340489413	0	1.36019982000386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3090164-2	3.97273565757628	0	1.39362633292781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34204465-5	8.38025612449757	0.172998294074285	0.76943748758252	0.224837360885321	0.822105800306208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56930007226528	1.39133106813974
Merged-chr9-75426377-2	6.17650055102961	-3.60624854988558	1.0189167630274	-3.53929651640111	0.000401194936765421	0.00930652621152758	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6786297740532	0.469435083901436
Merged-chrX-134910535-2	3.32374691432265	0	1.33658989256558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34077754-6	15.3353379170608	1.6314054239787	0.400406010127826	4.07437796315267	4.6137498933374e-05	0.00170815920980185	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07343067215316	4.6618689722009
Merged-chr13-18810179-4	4.92704378611901	0	1.30389198441829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63047196-1	2.7571083068219	0	1.35841716998966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65474814-1	3.55424356587686	-2.05483710725395	1.0666573836913	-1.92642655333518	0.0540511345217319	0.392316498551271	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05128657638074	0.989878296978726
Merged-chr1-153996861-1	2.0007335117853	0	1.45919167462018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32369157-1	1.60906823890281	0	1.47025116108105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85010317-1	2.1614747599762	0	1.37728415267707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46333292-1	1.88086393953329	0	1.53657685751708	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41995705-1	3.32165240213807	2.22462403172416	1.0726905381788	2.07387308132791	0.0380910996462257	0.304999509555479	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00113496145082	2.65080445539887
Merged-chr2-145743462-1	2.26091174312672	0	1.34494263908724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133021446-2	4.27198499501407	0	1.33722871188549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43638291-1	2.34093819719626	0	1.40185588138964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160362848-1	3.75119067925669	0	1.36798927951264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100513642-2	4.92789733731005	0	1.32799783343645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30366163-2	4.67564288830022	-3.51141943881169	1.16697924152335	-3.00898192004508	0.00262124714314538	0.0400018719794437	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07348464511062	0
Merged-chr17-85393240-1	1.67060566197467	0	1.46386189335316	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80242843-1	1.70687859907965	0	1.46203036874574	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15340624-1	3.29906023981341	-2.31309226212504	1.11015263167373	-2.08358039798338	0.0371983515692132	0.299576470500592	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26030236759855	0.773587911294612
Merged-chr10-11492155-3	4.86547505090715	0	1.31103864964442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35119994-1	1.47940409940119	0	1.42914771851649	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95749643-1	1.70722092847606	0	1.49823869501879	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3184052-1	2.32306493483097	0	1.41291829886459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57696339-1	3.74319962200668	-0.326584780986267	0.850410295446796	-0.384032016939168	0.700954717509263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16547325257714	2.38658767833973
Merged-chr12-87385275-2	3.50528991828575	0	1.36475614671368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77386456-1	2.51429673356581	0	1.40447786899002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-43493887-1	2.4793671980328	0	1.36978088330634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163634400-1	1.85955986404722	0	1.47130878289095	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104835635-1	1.81836676761461	0	1.56679401578436	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8753610-1	2.31683698250048	0	1.38663895154689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-119713136-1	3.74012910198754	-1.34824263048486	0.916735421713512	-1.47069983176258	0.141372311738724	0.795360747557353	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39323284382522	1.93885859565466
Merged-chr15-8642486-1	1.87751446824458	0	1.34864215947515	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105239758-1	2.35099117116647	0	1.36998653095278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152620021-3	3.16496481736403	0	1.3414021299044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9129158-1	2.15892602491238	0	1.3648658500537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54921797-1	2.25547500461825	0	1.44908379771449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34387031-2	4.29877897703192	0	1.31919171908764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44757317-1	2.04772153560303	0	1.34925981989004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67715268-3	11.4000924857074	-1.41834898018846	0.511605831386221	-2.77234717271571	0.00556536455400204	0.0707313672963069	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.74357908584607	2.7966234689808
Merged-chr5-125141289-3	4.81279246411204	0	1.33678553808076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13526109-2	4.53721303039443	0	1.3502709873158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43634250-4	9.01553665038953	-1.67181501154875	0.823545801963599	-2.03002068320014	0.042354436927628	0.329134621889973	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41749458429933	1.29835464915396
Merged-chr2-116923388-2	3.92398967708432	0	1.34144847156761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170121410-4	9.45693284812259	-1.64833773526106	0.571240887782927	-2.88553878147362	0.00390744317077647	0.0541080274290229	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93973827342092	2.00129118555875
Merged-chr1-24482838-2	7.09530192821672	0.135692685696251	0.785028986015607	0.172850541971648	0.862768908159708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71397944271602	0.887107926668329
Merged-chr4-116632216-3	5.00371355380227	0	1.32137118809883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46556529-1	7.07404407364338	2.08821844978062	0.58568502522825	3.56542912970468	0.000363261316805694	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82833150649738	3.95368943817554
Merged-chr2-90395165-4	6.43811524138895	0	1.30794655334051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22073596-2	2.75992807680788	0	1.35228793639954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50352655-2	3.91933698616978	0.902427481448732	1.30822364555103	0.689811321265812	0.490312848205949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.61242769162773
Merged-chr4-145209436-1	4.01492688685666	0	1.3147470993871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134105996-4	5.59878414241052	0	1.34043120694399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55708102-3	6.39929940927149	0	1.31291798428711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5592060-4	5.24357467831074	0	1.29574670808218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32227747-2	6.53273623776745	-4.69637588007592	1.01388012538961	-4.63208200108588	3.62006706957806e-06	0.000224863975977802	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18442695461102	0.420961122473315
Merged-chrX-9473481-3	6.45021227178145	0	1.31938405527781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39259366-3	5.22285776998611	0	1.31512052845096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3224639-4	5.32209413207952	2.00060667267949	1.09433937060561	1.82814100124384	0.0675283928338084	0.463033615752156	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0.735627456805112
Merged-chr12-110508116-4	4.63888556585048	0	1.32090627496162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43953192-3	5.09254983611627	-0.0053827990042747	1.20584951833489	-0.00446390608648051	0.996438330081305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	0.469435083901436
Merged-chr9-14807427-4	5.04719143187502	0	1.32459412937719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68154304-2	3.27357573653316	0	1.37611609218393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40271412-4	6.97205180795712	0	1.31008568421363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6625571-4	6.75976149885504	0	1.32595131738239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24630406-3	5.02244941874419	0	1.32511447205409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86971122-5	9.85066522832563	-0.310052975314326	0.530572717374733	-0.584374139794568	0.558968621355228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3811292963958	3.13251872425644
Merged-chr19-21295196-2	6.77496758890318	-0.892640129201979	0.619428773789226	-1.44106984850161	0.149564950695759	0.827629034479219	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53658039472684	2.31260716574699
Merged-chr17-36947161-2	9.1265090085386	0.625970257272557	0.542939523516149	1.15292814422256	0.248939879084105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60374536457487	3.34952400080693
Merged-chr5-121812961-4	6.90813150334992	0	1.31918270588934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36223229-1	2.11797330077258	-0.421940860808222	1.45291487991711	-0.290409897125077	0.771502673002504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr14-17916716-1	3.87710714129138	0	1.3639427417005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102750105-2	3.20940805309496	0	1.36394832466349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128727670-2	5.65263956965126	6.17171095059339	1.06879366314462	5.77446439234577	7.7198252341369e-09	1.42906430524054e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	4.26259621433327
Merged-chr5-66082362-2	4.43019629251371	0	1.40435448509655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122032190-1	1.72261341481876	0	1.57969704290583	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83081380-2	10.9191406286525	2.35753415720721	0.505019115906737	4.66820776273858	3.03838566674365e-06	0.000195419635609282	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25162278890736	4.37294890313088
Merged-chr14-25377628-2	4.38459439390638	0	1.31153264841963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48592662-2	3.52416268916447	0	1.34709733167902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40750393-1	5.51132613111503	0.78765337089877	0.689786355969365	1.14188018374453	0.253503826626647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96033196981848	2.37441905672497
Merged-chr10-44511219-1	2.65142547305633	0	1.35272238933976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3767129-6	9.50872514786128	-1.04279446795589	0.876372837696487	-1.18989820667747	0.234086403418519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75250318398994	1.10459859746439
Merged-chr16-91081683-2	2.81845954317347	0	1.35835414132285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110871154-1	5.21421965328114	4.76908950154373	0.998440212094404	4.77653989069583	1.78337188968207e-06	0.000127938282875237	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.04144112810011
Merged-chr17-35036816-1	2.29822409605664	-1.49030319143104	0.891902713100722	-1.67092572938809	0.0947363487051099	0.595425742279899	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15325108638608	1.41959898789419
Merged-chr3-149445460-2	3.94898694451685	0	1.35335113590035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102817668-1	4.55470831224645	-1.34966817973676	0.760971993445043	-1.77361084423961	0.0761275427033627	0.506529926228891	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08255703018036	1.76891977860032
Merged-chr14-45627929-3	8.42732147026409	-2.08073322590766	0.626702192119667	-3.32013076078462	0.000899752940434487	0.0175403507296038	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31934587007515	2.19127296633573
Merged-chr4-124234611-2	9.91620901866701	2.20800157832935	0.637645340847518	3.46274243201497	0.000534699978010838	0.0115812080752722	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52144833047849	3.29703037099497
Merged-chr12-16882704-6	18.832046578333	0.309593003630202	0.338751211499401	0.913924417450385	0.360756562355384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.40740030050402	4.63591046898128
Merged-chr2-160451643-3	4.86484555944278	0	1.32164411017964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107047749-2	8.16802550717203	1.37571212827697	0.73124318569869	1.88133326256231	0.0599265989816574	0.42343896378194	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98768197652273	2.7290780163363
Merged-chr6-15728506-2	4.87279732662977	0	1.32488268224024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74811045-4	5.814418738598	0	1.29309771754907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181918762-3	7.31135048328776	0	1.3388441815515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46311348-4	4.69476424388121	0	1.31712307409876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11628194-4	3.6370276895222	0	1.32262794329468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164526033-2	4.52591059110696	-2.03094804126668	0.800446706000807	-2.53726828537243	0.0111721299781572	0.120590354402487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49830566172701	0.793480537552656
Merged-chr7-44358539-2	4.16290743944633	0	1.3370209330288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98787100-1	2.03182650678776	0	1.42755415043619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60451810-3	4.36650838222375	0	1.323264692872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63429931-1	3.83945327199847	0	1.35569991088665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37693591-1	2.89813869800739	0	1.35413397336778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128782037-2	9.11166923573513	-0.356949351779917	0.54140529415563	-0.659301553998676	0.50970214471066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.38539624155695	4.0769298152659
Merged-chr3-136171794-2	4.9552154422962	-5.0612326685408	1.06248365274604	-4.7635863906798	1.90182132063623e-06	0.000134790039065396	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8864682802853	0
Merged-chr2-156352324-2	3.36859315326905	1.28959001280654	1.34872526263325	0.95615471032903	0.338994077363509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr1-34386690-4	4.0039862249786	0	1.32269747860997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47906273-1	2.32645150556984	0	1.35093901597726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75792095-1	3.48673468406356	0	1.33514150382741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114144162-1	2.02223979735364	0	1.4848620821593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126483192-1	3.64221863120131	0	1.31012285589087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34220998-1	4.44231824718133	-1.46025936228833	0.76280053525063	-1.91433971897848	0.0555767624847741	0.400719311633019	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81509404907128	2.12232218127513
Merged-chr11-46431386-3	4.84202718652608	0	1.30953367694997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103479655-3	4.45774072067645	0	1.34026800229422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97617320-3	5.19852370759463	0	1.3107763317779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12223972-4	19.753099417935	0.339339846669154	0.393420123561059	0.862538102010657	0.38839147538749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8331817122139	4.17990075531964
Merged-chr11-110542118-6	14.5014520899449	0.720194778968123	0.416624482106502	1.72864248237822	0.0838731014015134	0.543511670387078	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66003408921782	4.39276508427532
Merged-chr14-57718454-2	2.60604221209887	0	1.3787883212573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59818487-4	5.26768211607839	0	1.30477334482578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113594588-3	4.18809891578392	0	1.33263395477012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136118669-7	14.4852849860854	0.342939679734887	0.485164205315709	0.70685280566345	0.47965795500015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9488157563991	4.18995503948152
Merged-chr7-75794466-2	4.38845151976351	0	1.31097048420472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102346634-3	13.3442983931507	0.944540974713004	0.50023268601282	1.8882032324629	0.0589986720455027	0.418693225834646	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12225597373647	4.08030142795828
Merged-chr17-5187672-4	4.82872069634569	0	1.29914053170863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121315982-3	15.7783712886236	0.96881114194467	0.394180975425575	2.45778259820556	0.0139797773422974	0.142138249604756	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49730759278143	4.398014779295
Merged-chr4-86904210-3	9.70053462768599	0.053772270460988	0.566185015476115	0.094972966417647	0.924336299513326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98990796344904	3.72197601438842
Merged-chr4-136266945-1	4.00335052493529	0.679280348057968	1.00164054213361	0.678167785232634	0.497665315667161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39844884028548	1.69453213775868
Merged-chr12-103494677-1	2.02793826681816	0	1.40441977717352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55327752-1	1.70328010750331	0	1.43778874409513	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40812061-1	3.19756577675466	1.59047439236814	1.14144362385709	1.3933884767727	0.163502348405265	0.880809930658733	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794807375335281	1.90896656829731
Merged-chr8-119807956-2	3.77359397095227	0	1.35223387085603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104576323-1	2.82317776096835	1.90809822947188	1.08380305955986	1.7605580761571	0.0783132297029817	0.517385128720154	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.608998403723376	1.71664175267955
Merged-chr12-113125282-1	6.68944692249347	0	1.30491031201824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70403198-2	3.06165336083055	0	1.40518950373741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90256065-3	4.24055936987526	0	1.31532880355129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150112650-1	4.6410979968488	0.905917648889307	1.01682729711411	0.890925776147451	0.372968990930106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70605849515149	2.48334162937131
Merged-chr5-77217471-1	2.70825564236803	0	1.36783145154228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-162999958-2	2.47646379703328	0	1.36576216126289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104194915-1	2.54192546162855	0.810285058966607	1.32993840049754	0.609265104807467	0.542348732807271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0.581381506691384
Merged-chr4-139337260-2	2.66534742861218	0	1.36050299962012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-72218136-1	5.87011019765536	-2.70666675452187	1.14609547470932	-2.36164160338243	0.0181942219970024	0.174124140394863	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71726085348542	0.306240821987646
Merged-chr1-136394698-1	2.62249393633271	0	1.49185044013106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11050020-1	1.79154411356285	0	1.5908618078902	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70879015-1	1.86049701918445	0	1.52297646313009	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71194926-1	2.16379666764291	0	1.38890755657292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84985586-1	1.64669160562422	0	1.45309074187305	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6425522-1	2.32946941684269	0	1.35310738600364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105018262-1	2.23647115329662	0	1.35430540756817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9332730-1	3.16458802374428	0.485097802010608	1.16346152223529	0.416943571179404	0.676719682671563	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02470269386774	1.14051560518906
Merged-chr13-21170298-1	3.54411358379767	-2.53934738908339	1.13221040407612	-2.24282287103297	0.0249082390125054	0.222235634422608	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16540080568528	0.382164212378408
Merged-chr17-63393008-3	3.88508339905208	0	1.3620319918416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142699108-1	2.35153090300673	0	1.34501871415821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177667560-1	2.06506469072161	0	1.40275899316578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-28845254-1	2.60376013501134	3.37085360420592	1.23999802311483	2.71843465987022	0.00655916092806418	0.0802349176348337	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	2.6779497862902
Merged-chr12-84163148-1	3.45145055284367	0	1.36059393691603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64725402-1	2.20239595719549	1.27164121459765	1.44999221211635	0.876998651421454	0.38048737056438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr6-108405400-1	1.26969705385019	0	1.53516801524107	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115285476-1	2.50752750475905	0	1.34428900016143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67297473-6	10.4886947620451	0	1.30045755750163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101617081-2	4.75020789244292	3.12804988466744	1.15944258536406	2.69789114541212	0.00697802541423679	0.0839289616636697	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr5-147913922-1	2.92676222889538	0	1.34573305089713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174204433-1	4.36898240321356	-1.07863381855972	0.857606676988251	-1.25772553724474	0.208491033340065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28356936234556	1.07982873328226
Merged-chr6-4588153-1	2.02198155535933	0	1.41496560438397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134771365-1	0.746202005022215	0	1.99056366454816	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174354832-2	3.5449339915835	-1.51124511465484	1.20571855957426	-1.25339790339502	0.210060934117115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656505258713436	0
Merged-chr16-45145346-3	5.73410882493159	-0.421200527233542	1.29946040571173	-0.324134945075795	0.745835871531667	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chrX-12873405-3	3.8839438793808	0	1.32239155188918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36824261-4	11.3409865067819	-0.287014949467597	0.461796788963528	-0.62151785444802	0.534258950704446	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66689018281636	3.19704867772103
Merged-chr7-16192489-5	11.9856626769428	1.92123383914901	0.577499720475067	3.326813452946	0.000878451597475261	0.0172045321700314	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62263764758412	3.85848966173274
Merged-chr14-64753090-3	5.09404161284449	0	1.30771780382782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-17604499-2	3.79234049079637	0	1.33908525070396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63412279-4	4.718471798972	0	1.38532788451777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26491377-4	4.65179434352159	0	1.30071318878764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79846315-3	7.1256115140515	-1.7168215374863	0.852987827874162	-2.01271516589516	0.0441446029770266	0.339453192061283	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43790287190594	1.26927213904674
Merged-chr12-24786542-3	11.5299887935565	-0.783406568648982	0.529334953435217	-1.47998269066669	0.138877866078135	0.785040973537272	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62649247288772	3.17727526033188
Merged-chr4-25273419-3	4.83315154047263	0	1.32182039732802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110386490-3	3.786887282774	0	1.32497631549186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78792752-4	4.71394317958732	0	1.30383138188157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29895129-3	4.07209871847201	0	1.3475674776739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27795456-1	4.95261835984145	-3.18764271428294	0.995876884222513	-3.20084014880167	0.00137027527877613	0.0241874684945718	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65092342718122	0.581381506691384
Merged-chr14-118664467-4	4.30004620282323	0	1.33058166083569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7776898-1	3.06136449064858	0	1.32739209831535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59236590-2	4.03629515490004	0	1.31594646735078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79786419-3	5.6019224685083	0	1.30891717661284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70993653-4	10.4579696083076	-0.911954021663534	0.680725607791997	-1.33967932339368	0.180349622536804	0.945609117731688	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15237080263019	1.57074540165941
Merged-chr9-116086537-1	3.2444637273986	-0.401347864693522	1.26882147821975	-0.316315471942235	0.751763068691311	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0.563523181795778
Merged-chr9-95659550-2	3.30062261414442	0	1.36849285665401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153342786-2	3.6422921753116	0	1.35285074387633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60710832-2	3.82159692027225	0	1.32402316282359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116635588-2	3.71767768984502	0	1.39437647722424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127949067-3	10.4560684452633	-0.6916060697689	0.49551277986062	-1.39573810783132	0.162793374248891	0.878293909648947	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82404662591686	2.65197290288771
Merged-chr6-127143336-4	5.4679461241221	0	1.30913863218644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76583084-1	2.42371917447133	0	1.34031185127933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137945635-4	8.55584530789147	-0.024977459639099	0.562408672984997	-0.0444115833181067	0.964576328607334	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6177452199695	3.41701300570638
Merged-chr8-119359052-2	3.51931798337763	0	1.3139924819108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127982194-2	3.31157912516647	0	1.36076274632777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107156257-1	7.9241832465989	-1.8222618001125	0.600466624556225	-3.03474285762217	0.0024074084616537	0.0374201982243631	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.77088808810627	2.59790867484798
Merged-chr11-20559710-2	1.95915427891762	0	1.40267379405165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41583783-2	5.45670518228713	0	1.29572417722135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95614176-4	6.98492753396018	0	1.30672609952927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28478799-1	1.79591505393239	0	1.3760042748203	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6277962-4	5.37404736228492	0	1.31171098908537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52318615-3	10.0858108312811	-0.202832629313982	0.549604084198793	-0.369052259882074	0.712088772095898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72425364773762	3.63443903304079
Merged-chr9-100529070-2	4.52941406832131	0	1.35137850737422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24402624-1	2.31669768589358	0	1.43390765200004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170796650-2	2.80118702078598	0	1.44815312989208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116885400-3	4.08880308973614	0	1.32496474661718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117466144-4	6.65643245164146	0	1.31492699160708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49269406-3	4.1664300078494	0	1.30207227464225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-30605472-4	19.5179666812062	0.135283498873524	0.439865008027484	0.307556855863994	0.758419553823752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26914134037401	4.27529717501991
Merged-chr3-83002353-3	8.69592416036006	0.0420697248628531	0.534102013333561	0.0787672089087958	0.937217786483672	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80684318851351	3.59010173332673
Merged-chr3-122169803-1	3.20747470418721	0	1.32167683716855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73436667-3	8.12000002330625	1.32662514377075	0.872187715648763	1.5210316769756	0.128251888255909	0.743039976059102	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05701419036887	1.93871841517079
Merged-chrUn_GL456387-15421-1	2.30666725337426	0	2.433252610049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73371276-1	2.83107643016924	0	1.35024244316499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160081214-3	11.148584569508	1.30233327358912	0.58633176180819	2.22115423113503	0.0263405169579622	0.231576558966122	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32014272326752	4.52273741510898
Merged-chr7-71873103-1	6.3143063588881	1.00048663727081	0.811813954180762	1.23240877065293	0.217796426280695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90001422197953	3.87868501363016
Merged-chr5-113965190-2	8.16690685067398	-4.81894888002454	1.02907203776494	-4.6828100494217	2.82968710916406e-06	0.000184539654526382	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28725922968427	0.382164212378408
Merged-chr1-78844949-1	4.32372052790039	-1.71567765947256	0.841895580675896	-2.03787464722783	0.0415624706497547	0.324571780269199	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01694408424624	1.40264952818025
Merged-chr1-93486729-2	4.33833458141931	2.98635403204487	1.04892110219024	2.84707212564328	0.00441233642653611	0.0590837164197599	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.03247245696714
Merged-chr3-87804184-1	3.14165066421772	0	1.35556032672741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29814155-4	4.40938639133932	0	1.30504176131615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106812236-6	11.5818009758418	0.331809154321588	0.561353146215295	0.591088081644651	0.554461405092931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11752166455977	3.4278892541452
Merged-chr14-8108304-1	3.43001988799422	0	1.31893302815023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167260588-4	6.36435069844507	0	1.31538089958291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22790574-4	6.52089535634195	0	1.30380841552937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128728583-3	8.00629194037928	-0.630334157627978	0.747947731533181	-0.842751613586537	0.399367374388425	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07167860874487	2.12695852494485
Merged-chr14-71002483-1	4.79406182265883	-0.33372155871284	0.76366810607594	-0.436998161973331	0.662112681018615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52340252638854	1.67175145105019
Merged-chr7-145309089-4	5.73729324163266	0	1.30898499076982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89281685-2	4.39358847053806	0	1.33940975336898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191241767-3	4.39849568122079	0	1.34167723873374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67637869-5	13.6959754076953	-2.5386037715483	0.642941471918479	-3.94842125205167	7.86682850526254e-05	0.00262144709589437	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23302474775378	1.40264952818025
Merged-chr9-88406032-2	4.15441976708184	0	1.33316469017758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49381201-4	4.54596747942259	0	1.3197947962042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15715401-8	12.6736031015888	0.512579953874686	0.596080166124031	0.859917814759215	0.389834347608628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67171432413121	3.79777589789032
Merged-chr8-109862759-4	5.34672784242339	0	1.3010189406199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17895606-8	18.0764643300397	0.933232450467372	0.34002463338547	2.74460247534304	0.00605842360622047	0.0753796170929328	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84179367526669	4.73577780941521
Merged-chr8-122405306-4	6.24210746629159	0	1.31960814940686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50649722-1	5.38971365931175	0	1.30926847732659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54236358-1	1.85216734013227	0	1.41830355783801	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150586448-1	2.7855003470449	0	1.395514175605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101529415-1	1.67601243079023	0	1.39012248977907	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-7857052-1	2.95992356190751	0	1.33437869120947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92416694-1	2.44951400918723	0	1.35347731608671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135324316-1	3.95991838901561	-2.35494015161494	1.11029302420347	-2.1210077882858	0.0339211470176903	0.280832544408716	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1179932653884	0.469435083901436
Merged-chr3-52468488-4	6.71173207607438	0	1.30530983602896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99243255-1	5.82082117634724	0	1.29364251281711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55209828-1	2.69415576595087	0	1.39898333225088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107324332-2	2.78561279497502	0	1.35450014419396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136546153-1	3.24099281048986	-0.494732824821551	1.28345799091934	-0.385468654464627	0.699890225716884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25356541454442	0.666688015277142
Merged-chr15-41613149-1	2.52163381962386	0	1.39304083453326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43103219-1	3.60050893740193	0.964088281125854	0.976966366186263	0.986818292311658	0.323731725569861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58735677895305	2.37073167707971
Merged-chr1-54835966-1	6.09587983485324	0.221709978775775	0.709816704830265	0.31234821224557	0.754775903421838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49545938571595	2.30081306793583
Merged-chr12-76373372-1	3.34085933967145	0	1.34142335583554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116606880-2	3.34001584600745	0	1.31550612619438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35563614-1	2.68394469137127	0	1.37188925000453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132103624-1	3.67223614056058	0	1.352315884528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115172975-4	5.1028121450799	1.94939953536198	1.21277530701053	1.60738722506416	0.107969450701902	0.657353184157876	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.73596151290311
Merged-chr15-9710533-1	2.39651196381267	0	1.38880073716619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5897935-1	1.50868752770538	0	1.38345342176724	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13232767-1	2.73719118579746	0	1.37000918835258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-117979346-1	2.15422494147239	0	1.41042651335399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57150421-1	5.5887284322642	1.03201230690566	0.85006295627925	1.21404220626529	0.224731607492696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92906358510998	1.98383943966669
Merged-chr1-54829401-2	4.07655916530201	0	1.34775486762248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9329802-1	2.4892203994268	0.69536495019136	1.31721649342407	0.527904830878467	0.597565391577895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43491704069709	2.20192767614962
Merged-chr17-86744848-2	5.27763160598615	1.33221469827059	0.735313205838799	1.81176495633705	0.0700225220372273	0.475675825802082	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71028057819412	3.69073738957719
Merged-chr2-24104101-4	5.73510740303342	0	1.30193189234895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12210525-1	4.21091447677599	-1.46987525584546	0.859538732839953	-1.71007448493791	0.0872521002995874	0.559089881369853	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29072214031766	1.22548804685604
Merged-chr4-118296019-1	2.13636648503854	0	1.40422575282201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31001216-1	4.14373392896089	-1.58303924997686	1.14288856327758	-1.38512126277388	0.166015391283826	0.889873001298736	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0184956396784	0.563523181795778
Merged-chr3-149173736-2	2.25307026455832	0	1.46916577295495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47232846-1	8.26619398099056	0.677717892348374	0.565991725618061	1.19739894007869	0.231151096594874	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11323386323475	3.79786095570111
Merged-chr1-157560849-1	2.60283583673637	0	1.35615739117938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95265046-1	2.80000517902988	0	1.37271177980651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52108150-1	2.01015512525403	0	1.47619631318691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32503766-1	1.94820848792036	0	1.43372840792027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42003762-2	4.32189526904193	0	1.31525622297729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116603940-2	4.38346888526217	0	1.31173075248355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109108226-3	15.5737506623038	-0.218488573063507	0.391643255988632	-0.557876510632036	0.576928712356117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.26778306061168	4.9884646136777
Merged-chr12-26426466-4	10.0302884240457	0.795970364039493	0.453649066733543	1.7545949554593	0.0793286149448811	0.521931319013228	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31236033528589	4.63863406205219
Merged-chr1-66859679-2	3.19229985282927	0	1.33157983565474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156861863-2	7.14279600179987	-0.704871382255478	0.719949774023865	-0.97905632821563	0.32755214834949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54294039984976	2.05801908341688
Merged-chr15-8665445-2	3.011956514803	0	1.33801459497064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106364446-2	3.41697832555376	0	1.42389406677162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44819590-2	3.41671833228875	0	1.32739870963814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46087258-2	2.96503964062997	0	1.38037716807384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10819251-3	3.57834124171387	0	1.32881714570606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122357314-4	5.33213192450118	0	1.29724961189971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-18795071-3	5.80467795850103	0	1.32137353618183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-130314296-3	6.40008032814598	0	1.31924565121218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54600680-1	4.14230804325049	-1.21919582367394	1.17199314770985	-1.04027555626612	0.298211897215462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55759710875377	1.03956264035389
Merged-chr5-41887955-4	9.97370934315154	0.30594904691119	0.535539733762588	0.571291031501355	0.567802380100891	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09821227682735	3.93720872347487
Merged-chr5-79812248-2	3.61498544027282	0	1.38353982181086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9520188-1	2.77348952377303	0	1.32061314916872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36923252-2	3.93591461041903	0	1.3515157874183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-25713366-1	2.45520544345091	0	1.31928582654019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115623116-4	8.52533736849075	0.373755688803257	0.522613886263888	0.715166011900674	0.474506468071225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98845006447969	2.94217219817846
Merged-chr7-24364996-3	5.10584425564444	0	1.30593330211189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9602342-3	3.59997683390455	0	1.36153517151139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167268727-1	2.00329259254323	0	1.38688042357676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23383104-1	2.55179588326298	0	1.32785793242848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45142760-3	3.87015646591037	0	1.32376621408825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44305336-4	4.84412939116462	0	1.3193753899919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35565235-6	16.9340746737786	0.635562154537838	0.396837616750035	1.60156731043512	0.109251324370184	0.663303636745709	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21468990378794	4.7532922914035
Merged-chr11-46733591-3	8.6145407504907	-1.06035268571179	0.608684572021489	-1.74203969420528	0.0815014987380605	0.532419967663431	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59651496108148	2.47362192078634
Merged-chr5-137095374-3	4.43670270819785	0	1.32004530351677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112543104-3	5.01132583446381	0	1.29941730560102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130669272-2	4.4992946925207	0	1.33374447844993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100438809-2	4.92761848259013	0	1.31023551171643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22351383-3	3.62004228012163	0	1.3179477367448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65794920-3	6.77944347976141	-4.57737425049004	1.07436728131791	-4.26053020236713	2.03942519373603e-05	0.000892620754922133	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43377412007428	0
Merged-chr4-122853295-2	4.47572506193301	0	1.31642605338582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116142392-4	7.13032525249843	0	1.30366934850433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101374150-4	18.8181605391581	1.31974349376085	0.503236109931142	2.62251350353502	0.00872838088268884	0.0998362991703457	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49259042543364	4.74359812531087
Merged-chr3-84356114-2	2.903688904485	0	1.43432511843548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35843395-1	2.29723985589784	-1.0915339192162	1.45805480183089	-0.748623383596795	0.454084234104451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	0.423054662900563
Merged-chr19-60942029-1	2.98907369527989	0.696957858981107	1.01896451203413	0.683986390840826	0.493983759486634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	1.15307255889252
Merged-chr9-121671535-3	3.95011432301155	1.90877631956076	1.28245194870375	1.48838038063732	0.136650607636538	0.776484400575412	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr6-4955369-2	3.14601872154837	0	1.35588513838461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45395202-2	9.34325641912185	0.413334176674553	0.552004814949511	0.748787266850849	0.453985435535173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20183466509178	3.75941768832487
Merged-chr9-32034219-1	1.85291310330158	0	1.40830197143308	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111028544-1	3.45511753264201	0	1.32659737241112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54881135-2	2.53342891701818	0	1.40009518499714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79830555-2	7.139473041574	-0.905809324756535	0.566956130088075	-1.59767092493703	0.110116232747882	0.667191038029029	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57305609915518	2.23597386328136
Merged-chr15-100673582-1	5.09731172447017	-0.17650369125727	0.755307956596476	-0.233684406096582	0.815229994739677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92947083921905	2.66736997595706
Merged-chr8-122263544-2	7.58893215942644	-0.0716668477257505	0.571208450688932	-0.125465314176136	0.900155183291704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62029750013443	2.69100147567081
Merged-chr9-24376799-2	2.59542939492621	0	1.40935940875832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75458203-1	4.34871416751226	0	1.32801825819028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91623218-4	6.35371939068391	0	1.31581295924436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83610136-3	5.48478604422265	0	1.31760750469246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-171630319-3	6.23382841549785	0.665118921205843	0.5460705229032	1.21800920084409	0.223220476336632	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39865878032957	3.95523920815546
Merged-chr6-136471056-3	10.0270759503306	0.600935333745416	0.529576691783827	1.13474656847382	0.256481519389117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76386843926767	4.32391171993079
Merged-chr15-68428569-4	7.75407104247723	-1.96356246892301	0.740935222399661	-2.65011354509998	0.0080464723386817	0.0934764055899546	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40978094433799	0.793480537552656
Merged-chr4-32229497-1	2.86978764925388	0	1.3497091804469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133744808-3	8.62964954969256	0.768115174109945	0.391726123004486	1.96084746204467	0.0498968195631543	0.370223409920959	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82707478341885	4.46600000398214
Merged-chrX-133610658-3	5.37754556015891	0	1.30637608999949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115380961-3	5.28959492468511	0	1.31965926086824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16043003-4	5.189649284018	0	1.3060232872496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113442451-3	3.39851657735868	0	1.40413092453057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84533369-1	3.53397975268563	0	1.3385701814458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55249411-3	3.39074823875331	0	1.34064481075012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35972372-3	5.50011538918947	0	1.32771278157295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119817710-4	6.11441245658274	0	1.31710660645862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43363156-2	3.28496452255272	0	1.32960715996758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177141630-4	5.70527834517842	0	1.30944341232853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66856737-4	3.80275175158836	0	1.34010735842789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79375672-2	3.82180747952144	0	1.3399820400038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106651018-2	5.29741838180177	-2.41025785702443	0.977663403073279	-2.46532482390953	0.0136889092404305	0.140294144169569	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53049432369885	0.916190436775555
Merged-chr13-118538936-2	3.39374729079739	0	1.34679452628624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55309764-3	6.54431585614627	0	1.32093665643485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90613176-3	4.02652589110063	0	1.31883075354878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-22402239-5	9.39216993028781	0.118454911374355	0.723777989955453	0.163661941946653	0.869997279419528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98880444948182	2.3022060396979
Merged-chr10-37156476-2	4.40183689921821	0	1.31161333975341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47386291-4	4.00978372271589	0	1.30820653754738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88352885-4	7.37479867585624	0	1.30075986742701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136742949-4	8.16616113735611	1.7164518209362	0.563066541441352	3.04839960218979	0.00230063773655893	0.0361214496715954	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44833388045927	4.10801804840388
Merged-chr18-53088489-3	4.44154389791724	0	1.33896320120291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16619119-3	4.00706563169276	0	1.3484464681527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83695677-3	10.85202051029	-0.389827132289399	0.57066043947511	-0.68311574681427	0.494533705874507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83150409827574	3.45948392692984
Merged-chr16-93915657-3	7.59240971390702	-0.712423330637126	0.66559931829425	-1.07034864828719	0.284462404461825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74404905817188	1.60139579763857
Merged-chr15-38693360-2	3.30103691795326	0	1.41324536051738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3212937-1	2.46378718496192	0	1.35123236507466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122394122-1	1.28660683448178	0	1.48367475074115	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115054705-2	3.19625378332523	0	1.40481798637248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54826074-1	2.80933362695126	0	1.42912324213768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101255238-2	4.68516775181508	0	1.33925189652588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91260147-1	2.62987459757836	0	1.34637269945858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145122315-1	1.5297227242458	0	1.79298934813965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144699236-3	4.01064410151274	0	1.32027268327791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73621286-1	6.36207135851661	0	1.32363827117046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71166719-1	1.48313433703459	0	1.58311774700577	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34514278-1	2.71317255189729	0	1.34775708108496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152147586-1	2.28000654889904	0	1.36320635233181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135763896-1	2.9341840984097	0	1.33569441155449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115859025-2	7.98588237740504	0.590006952949088	0.573688149679395	1.02844542506031	0.303740350115589	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5380197301829	4.29307294885726
Merged-chr18-80586782-1	3.1419725621837	-2.39882547399446	0.929450554499537	-2.58090703414138	0.00985411141485555	0.10977271812396	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44438710631563	1.04220233489076
Merged-chr3-126583002-1	4.32179977818484	-1.52655886627063	0.781938326047964	-1.95227528235647	0.050905530428237	0.375830165107171	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9664062368489	1.29948469469889
Merged-chr6-116077888-1	1.46194215540752	0	1.39907997681409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78761342-2	3.32533099739478	-4.1402083222836	1.21559258771512	-3.4059177097038	0.000659420520378328	0.0136405486940938	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04201141882277	0.306240821987646
Merged-chrX-49281340-1	2.06559264716371	0.237474206014232	1.40345604173842	0.169206728926172	0.865634037191908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.306240821987646
Merged-chr12-79135083-1	4.09812573964564	0	1.32327003550037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118517997-2	3.24782831799519	0	1.33578365040355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125166020-1	6.48663617070687	-0.360659493781649	0.688052109847613	-0.524174678952044	0.600157050756027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21501962127952	3.18104020927589
Merged-chr7-75610836-4	11.1738283108924	0.866995503160618	0.482565946232553	1.79663631453763	0.0723933753589183	0.487893719699245	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10448909933134	3.98011498979181
Merged-chr9-56266384-1	1.69846567453641	0	1.39638063455019	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102496372-4	4.52565846376961	0	1.32926900960163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60747894-1	6.49483953159389	1.92080544495172	0.834996869805287	2.30037442583424	0.0214270164257414	0.197700662727672	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94277597333877	3.69175162681871
Merged-chr6-4811450-1	5.55963632490884	-1.28080132371456	0.82941690121204	-1.54421898305051	0.122535291582858	0.720071147821353	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7365013492209	1.13404870833161
Merged-chr16-18406489-1	3.13566546657127	0	1.34523592863106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117761287-1	4.23089632433745	1.28547985834616	0.975117306595782	1.31828227193904	0.187409173260932	0.972788929693293	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.950161359253383	1.47954504644696
Merged-chr1-180901271-2	3.09718222316329	0	1.34273173700963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87612675-1	3.50287894190498	0	1.33371875408047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85771596-1	3.48624067294481	0	1.36462847909919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51099443-1	2.38617500165506	0	1.40450283454638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61294793-1	3.71511855717443	0	1.3198083667502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81044598-3	5.12656187896123	0	1.30561264913294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126863928-1	2.1434144819237	0	1.41075288321758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8081345-2	4.32606568882199	0	1.32403707838227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10418045-1	1.44373783233349	0	1.52934160334276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35751252-1	2.86556404727651	0	1.37280266777917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99649503-2	5.08020832192541	0	1.31254918326938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86657788-1	4.02769342856372	2.07054194140425	1.11049182220215	1.86452696004396	0.0622477391721708	0.435554209652497	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	1.20539659680455
Merged-chr6-97444347-2	4.15653906894859	0	1.33701941353424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25660205-2	3.56196939644235	0	1.32269398882051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137844857-4	12.7813549858404	0.0922567061870636	0.366124797463413	0.251981583400624	0.801055298910176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17990078223221	4.17087317848805
Merged-chr6-97815946-3	6.16380218979444	0.881815449287773	1.24209080939233	0.709944428072198	0.477738598155344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.803125334851723
Merged-chr6-37316986-3	3.84259860357494	0	1.41109740108531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150495691-2	5.14641728312091	0	1.32665012076453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79512082-2	4.84310965197619	0	1.35784274272783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134616430-2	3.49236717637581	0	1.33579904467932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71755221-2	4.68580232056737	3.05148753495388	1.21063007460827	2.52057800227809	0.0117162267469351	0.125058567952503	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.14490468848716
Merged-chr5-36596392-4	8.1480589889844	-0.773681588148201	0.673757363869128	-1.14830891599499	0.25084105971002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73405606227726	1.47158896970822
Merged-chr3-40739154-3	4.22356389048115	0	1.34687138348063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95137944-2	3.89715487170942	0	1.32852435660228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99947286-2	4.35564279628744	0	1.35777973637663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30862083-2	4.21992094696975	0	1.31252050780968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-18625669-2	4.72259788812543	0	1.31522304777438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58686337-2	4.35628761731057	0	1.32973195297195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99396805-5	25.0027256750735	-0.478779464898918	0.286478218136577	-1.67125957433407	0.0946704176232828	0.595125840308902	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.28936706542452	4.86345400746627
Merged-chr15-12312039-3	6.69800011955561	0	1.29943334166502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129874114-3	4.21056542571298	0	1.33750852726457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51491986-3	4.05304501767011	0	1.34464785877123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123620252-4	4.49710136583825	0	1.32789768349826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65853886-3	5.31484885750223	0	1.3173274069235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127135361-3	9.66803713691919	0.910488151845805	0.47469259276649	1.91805847767608	0.055103596662436	0.398142373673545	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3003233215261	3.96401257999104
Merged-chr4-150367039-2	3.42697280971479	0	1.33433608210678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57622037-6	17.8022268981854	0.788260427829344	0.324434501723323	2.42964426915844	0.0151136485784436	0.150528346289739	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10425966110148	4.886816368658
Merged-chr4-139205982-4	5.621636115049	2.47602959041733	1.18481874357568	2.08979610074777	0.036636119783444	0.296290084575363	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr3-96274785-3	6.87236776019959	-1.82816821743274	0.770913905764348	-2.3714298104665	0.0177194118812778	0.170562853824546	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9135150571509	1.5713323725813
Merged-chr4-16080437-4	4.71385545728386	0	1.31806556594436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21836863-2	3.82864887923399	0	1.31845249112074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88575992-3	4.21853399455357	0	1.31945310712768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54766427-3	7.26474521434607	-1.99092333421773	0.624109991702022	-3.19001996553242	0.00142262965051489	0.0249030691514991	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12108079725761	2.05066483796074
Merged-chr4-43419131-4	8.07151597009771	0	1.29472136088948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76393352-3	9.90163792557425	-0.256790912182972	0.633456910229369	-0.405380236660438	0.685198035908272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18792028236458	3.15878683838566
Merged-chr14-27444001-3	4.52923754811838	0	1.32299265382864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88306518-2	3.22958630969672	0	1.37164910091246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128854256-2	5.63966254741617	-0.559437058953685	1.19401545516601	-0.468534185661696	0.639402630023292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0.306240821987646
Merged-chr6-99218031-2	1.69118959130408	0	1.60719970230962	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16959084-2	5.11614970328228	0.822838918679494	0.874016510914427	0.941445508642178	0.346476601503809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84112816157126	2.78071108037796
Merged-chr2-77343394-1	2.26977329850594	0	1.41772441206835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53420005-2	3.99474488470912	0	1.3082586276064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116811422-3	5.52800616087322	0	1.29289514155561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88966274-2	3.59139685335521	0	1.36085442677515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118950340-2	2.62144335650484	0	1.35806584511933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108121328-2	2.86779190308099	0	1.47367093561665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33996384-2	9.56849674059833	2.09039502257176	0.6633677726574	3.15118567517654	0.00162609082009218	0.0276060372306109	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95881303222958	4.11726193679587
Merged-chr5-125363495-1	2.8496465196448	0	1.36149307585819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50920116-3	4.5901464922727	0	1.34355840318694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-68605786-6	16.8949414523021	-0.363149759856771	0.382452560313879	-0.949528902509462	0.342351679348847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35230624274308	4.03646942782367
Merged-chr3-151446185-2	7.00245777104535	-1.81569901862073	0.741388171945899	-2.44905312402694	0.0143232321019828	0.144829848272892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97672330986984	1.628416560482
Merged-chr10-125371629-3	4.08946661936142	0	1.33750309474166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37735947-3	4.12147466685492	0	1.37620416178132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82200419-2	7.82581536567545	-1.34525596695798	0.753558990832896	-1.78520325989487	0.0742283534050974	0.497355922640979	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91889094276641	1.57995335165535
Merged-chr14-31410382-4	5.55774078769524	0	1.31034876503494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55612374-3	5.70698137150807	0	1.32724824502545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94245579-2	4.63987315093259	0	1.3193356765602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24964516-2	3.88888853214476	0	1.37133500735774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95833792-2	4.11427569665867	0	1.33503081087449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46984059-5	9.17740777431737	-2.32536336993046	0.799423685928365	-2.90879969015433	0.00362819244878376	0.050935806426133	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29772759357324	1.17595087342351
Merged-chr16-50534070-1	2.06138012539299	0	1.35649002776495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33566732-3	7.68791136605672	1.52651565735577	0.885429698124446	1.72403936821782	0.0847007364092385	0.547236312675862	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61286820151485	3.25457122863917
Merged-chr6-48666264-1	3.0199739664402	0	1.35094218088507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55277759-1	2.60459520434075	0	1.33765531168915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157129272-4	4.56159685983893	0	1.30060408214636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84646778-2	7.35063832991722	0	1.29530035359013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117289828-7	19.9342071909496	0.995401203158176	0.359077973876546	2.77210320759024	0.00556953748096071	0.0707517488784717	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61997043217134	4.66790804121502
Merged-chr13-9504559-2	3.86676459057879	0	1.32072940283324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34520179-2	5.28363297325918	0.764795957437189	1.3680550226681	0.559038887153542	0.576135181026782	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.306240821987646
Merged-chr13-41502457-2	4.30917408991486	0	1.35039728484444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84675156-3	6.77152045957977	0	1.29250900026297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38429311-3	10.0275208986635	2.69223784037589	0.657795318519202	4.09282000734899	4.26158518916066e-05	0.00160876687331538	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08172423902595	4.87269664077423
Merged-chr8-124744871-4	12.6955228777038	1.0136652491261	0.481812876266027	2.10385670258928	0.0353909488225926	0.289661440601345	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15897781946469	5.13381544058246
Merged-chr14-78925444-2	3.76708494641681	-2.86950396535265	0.985168833997134	-2.91270274325487	0.00358315513056633	0.0504949008328633	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72309496672071	0.963545719069792
Merged-chr4-99061678-5	13.9371145047348	0.096725217992335	0.595186765963457	0.162512380186682	0.870902379888655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98971244381542	3.52171023487043
Merged-chr4-11550291-4	4.82335459617763	0	1.3114836878082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136676518-4	6.38301232572465	0	1.30605390443058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3724011-3	4.45882479421021	0	1.33548365666552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129502833-3	9.83992826685614	-0.494857433417684	0.48844944281898	-1.01311904577416	0.311003302076555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76709935324388	3.32504741930247
Merged-chr9-75435179-3	7.43185621532657	0.290480901778521	0.709409717467251	0.409468456135055	0.682195911102587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75187068511837	2.76862326339428
Merged-chr3-132033982-2	4.51495218712242	0	1.31573422028902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25766297-2	2.81802565826555	0	1.3537772484423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91170099-2	5.01422462864179	0	1.34369018912229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123245753-3	3.19138614086295	0	1.33558234892862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35596744-6	11.2009308148322	0.536709948894989	0.646399956060333	0.830306289261093	0.406365633100904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00536750329008	3.09275150598807
Merged-chr8-128519572-4	10.8316058017011	0.100262042168503	0.493113250716549	0.203324575080492	0.838881348549271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6215340787201	3.66839702766497
Merged-chr7-128412197-1	3.03515854854375	0	1.33645874322457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24697101-1	2.1427756952784	0	1.41389012102141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7221255-1	5.59998696536229	0	1.31205196981445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-71593956-1	2.33258533710952	0	1.447446072598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192981925-1	7.53123481819541	-0.186148225045481	0.752907737432401	-0.247239091578859	0.804723193465104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15020417276744	2.0900981927122
Merged-chr10-70287057-1	2.33372755673734	0	1.34310888642564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4531896-2	3.25548901079396	0	1.36702535361802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-87075101-1	8.3138915406021	2.01186948696975	0.585878293477092	3.43393757606146	0.000594881176973101	0.0125884408647941	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95912513393917	3.85356759211969
Merged-chr4-24720986-1	1.65671013911843	-0.412585993394998	1.524357441407	-0.270662235895393	0.786650824342573	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr11-98849294-1	1.99377747816022	0	1.39491055930299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51842387-1	2.8735895060707	-0.843130159898136	0.999569071430142	-0.843493645408437	0.398952418224547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38608716836469	1.37038362634479
Merged-chr12-16920322-1	2.5113564654596	0	1.34919583169995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30547974-2	2.31318054363334	0	1.37772353088745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84117921-1	2.22672148510683	0	1.41289431256639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79956666-1	4.69980135813712	-0.61273098622943	0.824422882622536	-0.743224137933069	0.457345991837559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92961006619344	2.0411132438942
Merged-chr8-105408578-1	2.53688267842721	0	1.39700857991836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-108191302-1	3.33897416013194	0	1.32118625083603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60828399-1	2.12331950413254	0	1.43091986623815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30195263-1	4.95478417329996	1.49863054201553	0.846807357256601	1.76974199524038	0.0767701306174738	0.509819202777382	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4274825999887	2.78974893682455
Merged-chr9-69480551-1	2.2219120801123	0	1.34622188769388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85464160-1	2.49711168749085	0	1.34225200765773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21037420-1	4.05733718785895	-0.273645580950592	0.748263380946589	-0.36570756757389	0.714583298635207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05181795299869	1.88639437725876
Merged-chr13-55017414-1	5.98486515211268	1.31540543892854	0.6888241691791	1.90963891481358	0.0561797209960804	0.404263852902749	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15234900728829	3.62268423322043
Merged-chr10-77369316-1	2.14186208018649	0	1.38727004528072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59208683-1	2.6366569035671	1.75492834097192	1.36235123189505	1.28816145197064	0.197689767474814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.581381506691384
Merged-chr9-32770953-1	3.03453070425794	-2.7192579012715	1.24544146596858	-2.1833686893962	0.029008669807329	0.249815568954892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49189358080365	0.735627456805112
Merged-chr6-140111467-1	5.09110360241401	-1.2645208855109	0.983638128037289	-1.28555497135321	0.198598420192592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59246503187682	2.00626573557989
Merged-chr11-34032391-3	4.46033740764403	0	1.31495459447634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62878293-2	5.88652289330185	0.320620922534059	0.576443090551283	0.556205682381296	0.578070255106722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53051266973859	4.01255741346305
Merged-chr4-9621335-2	6.28929928758377	1.22662345530901	0.835021862355554	1.46897166482416	0.141840474858094	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47965648543459	3.22066904677111
Merged-chr4-59596769-3	5.78343583921418	0	1.33087375938489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133075784-4	5.14172831836717	0	1.30895150465189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30447421-3	5.05040250385449	0	1.31136869867746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17348049-8	16.4385296792773	1.11063107136605	0.497578335881977	2.23207280396848	0.0256101515437252	0.226672214922967	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49417662514485	4.40200254347714
Merged-chr14-30212240-1	6.4848594932888	-1.20982651067333	0.794839692588233	-1.52210127646466	0.127983706220481	0.742078373263849	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47473001405262	1.41959898789419
Merged-chr7-80166585-5	13.6823373247533	-0.705553893036604	0.50128208524224	-1.40749871939998	0.159279556716692	0.86505002603133	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42790820727509	3.0607915479903
Merged-chr12-55870147-2	2.91813950969702	0	1.34309997802806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152783939-2	3.80617748526709	0	1.31907162209474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129468985-2	6.64489528422657	4.25225402324923	1.01352508306853	4.19550940996465	2.7225898230104e-05	0.00112459165478676	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.97727367680107
Merged-chr14-70119559-2	5.00380624857434	0	1.31217997979266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27749947-3	4.51487506947156	0	1.32729918470409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94149234-1	3.67890376625828	0	1.31824716103557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24574470-4	4.71093096315802	0	1.31718720654798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75751236-2	3.81888974153387	0	1.36051886520289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38693572-2	3.42399966318859	0	1.3752667748256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46917012-1	2.7387280974128	0.981059416135194	1.23067002807198	0.797175029664255	0.425349385963184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.683637474991079
Merged-chr19-10277395-4	7.63656074020412	0	1.30551052617896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109438123-3	5.90732530357722	0	1.29924294696711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84591012-1	2.77616699825882	0.46454718918663	0.967921396262869	0.479943093499369	0.631267857809186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4937904306168	1.84001395625789
Merged-chr16-11054596-1	2.89426504908764	0	1.33549781261961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78923949-1	2.74565666641626	0	1.3263953635694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193888198-1	2.94702132612153	0	1.34671459815009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120567291-3	6.55883706436788	0	1.29281097132519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38023608-3	7.02781663154102	0.420802592311056	0.689928837722797	0.609921732942736	0.541913655200309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77295385033336	2.57562851946334
Merged-chr3-75280616-1	2.29278243651713	0	1.37452446912472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97511923-4	13.0280371206175	0.36915023465841	0.412034272755801	0.895921186821256	0.370294857692269	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5355722057678	3.89934426829726
Merged-chr11-22653166-4	6.55174106524408	-1.74944486372784	1.13767682736685	-1.53773446170731	0.124113553882532	0.726666453902691	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52223794377792	0.469435083901436
Merged-chr17-49009612-5	12.1716615985461	-0.455516128571098	0.563796754274954	-0.807943864729932	0.419122898180174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2869557293678	2.41041824439107
Merged-chr7-53551625-2	4.19232574965077	0	1.39784474218892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124027559-4	9.94594591257538	-0.716377262475166	0.559455174173452	-1.28049090534117	0.200372541261654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71966449035006	3.08475616112279
Merged-chr1-161286918-4	10.8621683956175	0.0343586296309236	0.518028728885994	0.0663257223297457	0.947118504852009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29019534687331	2.86697700090772
Merged-chr17-29414778-3	5.01307797999514	0	1.31888599446874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156752412-2	7.26480863222162	2.13593078701367	0.655188868865139	3.26002300788984	0.00111403176341646	0.0206225268023264	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70639152775778	4.12394955388354
Merged-chr1-38049809-1	2.25730179572503	0	1.33260497999075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13197476-4	4.1438279862366	0	1.33767276397357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-170677447-1	2.19597277990926	0	1.45036905469997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25312954-2	3.65417865304361	0	1.36256082925546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83104802-2	13.2042650384166	1.13365585552506	0.422534694018766	2.68298880913837	0.00729674319563395	0.0867090345266224	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4176271100679	4.7705238650475
Merged-chr15-63924640-2	3.97188187163537	0	1.31904525357261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117393801-2	17.1262657375038	1.12608388075428	0.413179424685526	2.72541131885101	0.00642214260114001	0.0789282171175654	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99782128176118	5.09412039564188
Merged-chr6-72375364-4	4.10277459336046	0	1.32087297869791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122470620-1	3.85159012571149	0	1.33698904677641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61514636-2	2.14618833360688	0	1.45852892152842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104938728-2	6.45922782666921	-1.03583192010345	0.534385269977935	-1.93836166207616	0.0525791143082361	0.384450576657267	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20997639718853	3.15280584588044
Merged-chr2-45827391-2	2.92968063049963	0	1.37142549749011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11489236-2	3.77279245509663	0	1.30660812471279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49971969-2	3.51853678407894	0	1.31636178147334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126869624-3	5.82450731673956	0	1.30973022286814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112800650-3	4.06475257655215	0	1.32255424882995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171661765-5	12.446568957906	0.298182277221434	0.633918487702849	0.470379525137319	0.638083889772575	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90937905939221	3.39213350996407
Merged-chr1-136629553-2	4.45039004912639	0	1.32059138211919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-44055903-3	9.97029795324013	-0.512615427181814	0.600898903756069	-0.853080982470734	0.393614396815462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67278837204676	2.51390733230198
Merged-chr4-138041377-3	6.63866859503823	0.0465797822318896	0.654074096120026	0.0712148401965486	0.943226770635988	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81934640989135	3.06117532384274
Merged-chr19-58104766-3	7.3004833925784	-2.40965955870655	0.734764434929629	-3.27949944792487	0.00103991413658836	0.0196283326796163	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.677743685346	1.14490468848716
Merged-chr18-65501542-4	7.27181435939447	0.510018993448717	0.500494198572369	1.0190307797843	0.308188354125762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64283094281688	3.68360322248615
Merged-chr17-34556453-3	4.31130583918556	0	1.33547543002908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24715233-3	5.71262014695208	0	1.30770192215225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5301184-2	4.18572447316883	0	1.32413070135242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36161333-3	4.55536727181021	0	1.31574579799248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120039158-3	8.5236948285411	-1.84399827293637	0.595560085731221	-3.09624220480178	0.00195990200457297	0.0319380938630488	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83085110793426	1.99834080004871
Merged-chr19-29501131-4	8.33795430606776	0	1.28999017026037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111226466-2	3.23460047064522	0	1.36846645256928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91864325-2	3.74207305495612	0	1.34532040396277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12813920-6	15.4084970264932	0.684556437649222	0.40171279378775	1.70409418927025	0.0883634920312037	0.564446307420963	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98344221807969	4.60510452562035
Merged-chr9-13681812-1	2.93958582182726	0	1.37419870956034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47504725-1	4.68222722984731	-3.20367754303724	1.10789019468751	-2.89169229802677	0.00383173020980075	0.0533277554083324	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07235671474451	0
Merged-chr5-115528337-3	3.26771725918782	0	1.33774221545503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76787450-2	5.85932527875351	-1.01350574158593	0.547801318269352	-1.85013381272587	0.0642942655837472	0.44610034814563	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0815976605459	3.04548501690282
Merged-chr11-54093241-2	3.07780726763649	0	1.3304492296688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44245939-1	3.09351091050443	0	1.36037406067813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34611082-2	5.95623645480428	0.336798287142194	0.854967169282758	0.393931251681557	0.693631796586586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.162934069342	2.23562996408379
Merged-chr9-114727491-3	4.10682398749171	0	1.31990123672189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74017363-4	5.60312572136467	0	1.30754533805776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83512408-3	4.63052669361084	0	1.31038428800883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54983227-2	4.02690392888876	0	1.30349215371524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102778053-1	3.11236420286148	0	1.33703556374501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9081597-4	8.48841442752293	0	1.30836329654322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99517674-3	3.93570588321545	0	1.34473675363327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55613103-2	4.33926351049013	0	1.33463731931157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64396526-3	6.31582136713987	-3.0682543805681	0.95434256871968	-3.2150450803891	0.00130424038291564	0.0233434379791852	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24536865541092	0.609949614787909
Merged-chr3-84820479-3	4.73622708786617	3.13896665966368	1.13745121689557	2.75964948038019	0.00578634086483133	0.0727422528190204	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr2-35329585-1	2.65324405492624	0	1.35371472114434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163754446-2	7.86143129940271	1.05331303325085	0.665286358817835	1.58324760351694	0.11336504025914	0.681193117370595	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30473412178517	3.1690188381782
Merged-chr15-58986633-1	2.9811855498999	0	1.35774551602151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99171543-1	1.75635674036147	0	1.37917671868048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20176249-1	2.28878350989887	0	1.34997711305377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70601516-1	3.41352982065804	0	1.31881219479246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95160262-1	2.75774694484187	0	1.35290227542954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85145978-1	2.90591710827349	0.196682160833071	0.901394149879719	0.218197733876258	0.8272750506526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80017065338754	1.5268023559189
Merged-chr11-108040999-2	2.45360463090725	0	1.40597628773932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32516491-1	5.63507516769057	0	1.31177767543657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142441785-1	1.45767414285921	0	1.4863480985424	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97347981-1	4.29637936228365	0.863821736920621	0.955888681896194	0.903684449121272	0.366162747334145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68031192563363	2.73330667186518
Merged-chr9-44130165-3	3.58895782834266	0	1.33273906731677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83538004-3	13.1231973489349	-0.322228154720349	0.523148793789525	-0.615939783376408	0.537934263347845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3461397083581	3.88128548026027
Merged-chr4-138951829-1	2.84175674577722	-3.9802958563356	1.13444461091461	-3.50858545057269	0.00045049649046407	0.0101677630755261	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74812893021006	0
Merged-chr2-19703157-2	2.53026881013192	0	1.52789164138266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97564881-1	2.32579834822287	0	1.3644839639628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40415651-1	5.37723791217048	0.341375989522961	0.652569044201193	0.523126238604895	0.600886407277393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61113411395032	2.8621248248179
Merged-chr15-36578092-1	2.17866096998342	0	1.35870041272896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95678589-1	3.39923766223241	-0.754459800134023	1.00694684459371	-0.749254843177385	0.453703619366664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64810741817798	2.39476335534657
Merged-chr3-60597175-1	2.20253093516373	2.41745632931543	1.44574091006479	1.67212279356962	0.0945001107931189	0.594226735939872	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr11-79891322-1	2.89772752930072	0	1.34941622063622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22034646-1	1.43518350768952	0	1.51579014361371	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11067646-2	2.34267798773094	0	1.39885252143935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131115795-1	2.05767781752467	0	1.44518018743797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98087519-1	3.58143491624753	-0.456638510621696	0.99298169730595	-0.459865989333537	0.645612413719465	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49404786749473	2.59280940140512
Merged-chr15-30529772-1	3.38904580256174	0	1.35894577993233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73028914-1	4.8010463697028	0.647700838771648	0.866681218710039	0.747334573299836	0.454861627997026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26276407054449	3.02932327927184
Merged-chr6-113033465-1	2.5905303296634	0	1.35997485126252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159302871-1	2.41411989689572	0	1.37531174160704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22881219-2	2.61353564372843	0	1.40386155570232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37749754-1	3.19178959709826	1.84972924937714	1.04008148176006	1.77844647925754	0.0753305547373293	0.502785573882993	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90094538361611	2.21836476644116
Merged-chr10-68467313-1	2.5655289500173	0	1.42831249385179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25437735-3	5.80167678096889	-1.17599889348319	0.703019430115159	-1.67278291766495	0.0943700389101662	0.593637327938364	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48237177419328	2.40130322020166
Merged-chr10-21192634-1	2.63560337987897	0	1.35286106819704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-153873674-1	1.58955635549544	0	1.42857278910109	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94549985-2	3.87966964997316	0	1.34255223938112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-86881134-1	1.7046313326805	0	1.42728505698517	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83652869-3	3.73281535283387	0	1.35302764151813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114311330-1	3.70298330864	1.52789303815649	0.885350325252307	1.72574967736197	0.0843924566284167	0.545956783569995	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27730043871497	2.73752739441368
Merged-chr18-5142001-1	3.13597101197857	0	1.31936889998976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52252865-2	3.80213652159884	0	1.33329060683028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25411621-2	7.19292574818564	0.580092645892114	0.885579424821871	0.655043048237933	0.512440038239812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.810661139835435	1.57403368136583
Merged-chr13-36324889-3	4.98339849348486	1.37381949617406	1.27980364847923	1.07346114992449	0.283064260746825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.469435083901436
Merged-chr9-47715575-2	2.86506950824803	0	1.36277539668001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59228803-2	6.26603979096557	0	1.32376351752671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4404425-2	6.73871589858163	0	1.32527602864495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165655254-3	5.2067416605739	0	1.30140797068235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23566373-3	5.69040919093578	0	1.30677436558325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165658794-2	3.45183192609338	0	1.32598608015012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88939944-2	3.2132997331989	0.369947466675532	1.2455998246434	0.29700346721022	0.766463862064657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0.729295484888209
Merged-chr1-164057007-2	4.84021091378284	0	1.32353695666826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106440043-2	4.2957056560835	0.851009209234387	0.862205577762546	0.987014270358568	0.323635642856163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48221284437905	1.74879361603124
Merged-chr11-49728043-2	3.78293881434931	0	1.30569986195221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25585845-2	3.64627987881346	0	1.39014817472012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135700787-4	5.25194009998513	0	1.29816344624292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94089899-2	3.76066134646023	0	1.33768595205406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166082815-3	9.01039659073883	1.12956798522517	0.760419515970869	1.48545370220146	0.137423678992543	0.779386194015513	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81463601313001	4.3144475317541
Merged-chr5-148379663-3	10.4451019150898	-0.156006611733209	0.549440716453645	-0.283937114708482	0.776458573068752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41106817506407	2.71642742107674
Merged-chr10-68714550-3	5.43234212221202	0	1.33861378760853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80693947-3	3.62772891794977	0	1.36472683792739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116655782-4	6.21238705226043	0	1.30723584159318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66730307-2	8.09145693910415	-1.49866889321236	0.897746212606351	-1.66936810444613	0.0950444507162704	0.596730849010896	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10365716610258	0.773587911294612
Merged-chr16-22300161-2	2.77970471466186	0	1.35310961749158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115643257-2	5.93974378266748	0	1.32951943706466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122928884-4	4.45283579573306	0	1.31877141756154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-49627180-3	4.97341638605804	0	1.32847903657001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65374211-5	11.3688614321534	-0.298080720240713	0.415769584066771	-0.716937293308216	0.473412789508175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0778949698338	3.73499190649826
Merged-chr10-94345807-6	16.2239182506734	-1.38777323098931	0.640549961668758	-2.16653393807703	0.030270409364681	0.258366009710612	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90476757207474	1.35032549026822
Merged-chr17-73037131-2	3.74916261131567	0	1.32967118199611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191194730-3	5.36367295699919	0	1.30402792153498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83556492-3	4.95438265257019	0	1.30520496415796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45766626-6	13.7471902230734	1.43497966593694	0.518308027700655	2.76858468178252	0.00563003526160252	0.0712708803186127	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22392620897319	4.52386918821341
Merged-chr3-121161824-2	5.5090754601593	0.128435073064745	1.04100265968073	0.123376315968429	0.901809110892306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2126312697663	1.15307255889252
Merged-chr17-56273361-1	3.84347267757088	0	1.33491012457406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180964201-3	5.05180106839573	0	1.32306735486657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3769598-1	2.45412708878334	0	1.43223757522604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95200678-2	3.82440180596589	0	1.35436670673961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173511793-3	7.42226606200143	-1.08797084794699	0.718251777208285	-1.51474856376372	0.129836090834183	0.749493744845454	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92074650980577	1.9091002533888
Merged-chr9-7605795-1	2.30591028953522	0	1.35986084920398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117725115-2	3.42128699038946	0	1.37880950613469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85396913-1	5.25077425089497	-0.184067903377865	0.717272225781274	-0.256622097945272	0.797470514454287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3668005605872	3.08529456966439
Merged-chr7-100501335-2	3.92254381744462	2.35915368058215	1.26328042404817	1.86748218026072	0.0618342830179489	0.433361603594723	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr19-55818158-4	5.19363975054113	0	1.30635452367396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45876524-3	4.8127630864402	0	1.31674503122196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65802390-3	9.82661080718453	-0.0841386927736438	0.572359651577982	-0.147003186792911	0.883129504952814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01683329840561	2.4044790941682
Merged-chr4-132951225-4	5.83485775827353	-0.230993044077432	0.990215154043154	-0.233275609986641	0.815547396611913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14855119822055	0.892489746801999
Merged-chr19-10795200-2	3.09496068035857	0	1.33903347593448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68983712-4	6.44084020033062	0	1.30595745554494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50945006-3	4.36865163124255	0	1.31904565921839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156344894-3	8.7935706653115	0.012803699103848	0.561296652939478	0.0228109307917584	0.981801088783286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14809806208147	3.66282395120017
Merged-chr13-93188383-3	3.72116233214561	2.49071597147979	1.21776158024376	2.04532316660969	0.0408230082217261	0.320982390801455	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-93278605-3	6.31820077152484	-0.465481781193467	0.719031096456776	-0.64737364418209	0.517390149212565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6431056532621	2.40173839819892
Merged-chr12-56405038-3	4.24859293666542	0	1.320851809436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121336797-3	4.11554623436726	0	1.3311677462735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120167673-3	5.85598453374019	-1.21825140833381	0.976630910914166	-1.24740205815673	0.212250112278345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20443150413502	0.581381506691384
Merged-chr9-94236906-3	3.83485595711825	0	1.37799357954993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110798103-4	9.69611808693167	-0.593406655426965	0.587648341177915	-1.00979891177351	0.312591641636783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75522538648811	2.52686403234129
Merged-chr14-14349899-2	4.87853080000275	0	1.30458999339461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77543548-1	2.15300914208859	0	1.34321697794151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15830894-4	7.03348855976906	0	1.31589195544849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99227756-3	6.28879868637416	0	1.31364071079826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43722902-4	4.77771315731377	0	1.31504567276743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46837483-6	14.6743907402147	0.472235802119784	0.421578778225678	1.12016027966898	0.262645466911249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16362561088512	4.54547224189416
Merged-chr10-45486200-1	3.10849155548195	0	1.35908269115864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43399556-2	5.23947293755407	-0.541144072818724	0.81327966155249	-0.665384981822515	0.505804288145092	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79545565523336	0.735627456805112
Merged-chr9-120052419-2	2.37696106624564	0	1.43190161867121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32789747-2	3.50420940731058	0	1.35768690624495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43496073-4	6.6287051184264	0	1.3043296016976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38402461-4	9.98216925028539	0.708514075781498	0.602043739151297	1.17684817515135	0.239256110261366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48203601083675	3.14348572890932
Merged-chr4-122808322-3	4.091986451955	0	1.31418701687982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6335455-1	2.12121366581171	0	1.35568885930468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5436169-3	5.37302315507635	0	1.31124831946474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16231404-2	3.97010912142851	0	1.3630173122274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129491215-1	5.50856548568748	0.524938317077855	0.998424747340699	0.525766532205884	0.599050430663348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29981282341956	2.75421478449417
Merged-chr1-51699552-1	1.61639336815713	-1.83639686059574	1.30538700657788	-1.4067834683064	0.159491606123843	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84933722051372	0.581381506691384
Merged-chr15-31465959-1	3.39106914618943	0	1.32783452432955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43548403-1	1.32904697120325	0	1.61740137239867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17326720-1	4.8762241030151	0.204002068443059	0.914679104130832	0.22303129865081	0.823511147156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30048697147176	2.41316001406225
Merged-chr6-113675384-1	2.43651478177748	0	1.43862893487461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34060887-1	2.6607400898752	0	1.34121406134166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81439491-3	6.17738232701739	2.83966923761397	0.816870229178601	3.47627950705143	0.000508422105449606	0.011118926004923	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.867941679574229	3.04531397392308
Merged-chr9-40519507-1	5.08439314035879	1.01546666658509	0.84898818332875	1.19609045982667	0.231661260149441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55291642421081	2.72081599314607
Merged-chr1-62679181-2	2.67983303693413	0	1.38216506208038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134079755-4	4.97544579494198	0	1.30246999600385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34116189-1	2.70415345983937	0	1.41773304657016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70880760-1	4.34228286203902	-0.930852681362094	0.872994270775767	-1.06627581935322	0.286298976953668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76480599994912	1.95001597236927
Merged-chr18-53915193-1	2.48562958320437	-0.169245938282242	0.843271835409939	-0.200701518982864	0.840931971907803	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97964977359271	1.99708834426639
Merged-chr6-99031692-1	2.3396765004365	0	1.42388019367639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119089319-2	4.52138905150704	0	1.31963490183571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131300934-1	2.03030136798908	0	1.52539751040477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50000975-1	1.95929064555688	0	1.35575574166823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8380890-1	2.42405581917713	0	1.34270317444858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70849747-1	2.27215436129696	0	1.46302018386321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28807207-3	4.01030881000633	0	1.37506510389562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93042117-1	2.56001851477271	0	1.38785488493092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9038407-2	6.52654815006123	3.00865408540574	0.799521703919628	3.76306743226096	0.000167841921284766	0.0047665355012057	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36411672661466	4.53085682714358
Merged-chr5-140738402-1	1.14176773546032	0	1.53202118044413	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57479861-1	1.56530643868982	0	1.44416609521299	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34386598-2	6.60052066468022	0.940703862104593	0.650496222764235	1.44613270482516	0.148139984206786	0.821692442728826	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12080762189472	3.00708887812977
Merged-chr17-28716229-2	3.40316637888666	0	1.3177840739253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9988125-1	4.65138257082411	-4.5220242889349	1.08987931722809	-4.14910551788051	3.33776940804345e-05	0.00132107740604487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22859004233294	0
Merged-chr16-25794545-1	3.2130161331016	0	1.38336034213714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4000877-1	1.61480927200189	0	1.56999232054594	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24039598-3	4.67415254546968	0	1.30036608310224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-93648263-1	2.29053748135752	-2.30484301574931	1.16796970887413	-1.97337567767153	0.0484527765898565	0.362763124637449	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22643730516112	0.563523181795778
Merged-chr5-117160699-1	7.89306753447888	0.585686562857527	0.75220820791546	0.778622935371308	0.436201864476413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53986377499808	3.42678330787402
Merged-chr17-49968682-1	3.27613923431719	-0.546711164576337	1.14954732440147	-0.47558821891999	0.634367770159693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61706794601376	1.52860153008918
Merged-chr4-53232591-1	2.88651180183154	3.49045073444417	1.269654285701	2.74913476349747	0.00597528136874619	0.0745296309070602	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr1-153921834-2	4.22567642768487	0	1.3329859508187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25187671-6	11.0037911783895	0.688525798549061	0.576061804996395	1.19522904066408	0.231997555152379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53347555698569	2.89578973417781
Merged-chr9-116058642-2	8.12303510591389	0.267615055753095	0.616439059014046	0.434130595457608	0.664193609068218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73722021652023	2.84583565619994
Merged-chr15-78254913-2	6.78363149592146	-0.43924967847532	0.682489838983869	-0.643598854349687	0.519835593354654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65322832851066	2.25624284013603
Merged-chr13-65176370-2	3.90740026781563	-1.65734031978053	1.2174039194767	-1.36137258412387	0.17339597551482	0.920001089314015	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	0
Merged-chr4-132621905-5	16.4364492208575	0.153812863718559	0.43569080290662	0.353032156502796	0.724064333272219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12546268845175	3.95958694306791
Merged-chrX-103634066-2	4.57354442631461	0	1.30495372032048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34869019-4	5.98165629571064	0	1.32437053196894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146804584-4	4.96219405004175	0	1.32711750876859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37417707-2	3.9597742188845	0	1.31090082030599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17549136-4	8.97817189004912	0.2878119787967	0.589036475071156	0.488614866782117	0.625114385753944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6795342742676	2.98700836604974
Merged-chr10-93242352-6	17.3764813387556	1.51234924143977	0.494004753955074	3.06140625030767	0.00220299968056598	0.0348987193033369	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15516879118029	4.62242077417823
Merged-chr17-8225901-6	14.7393282614735	-0.527669089921638	0.476671469826241	-1.10698693612602	0.268299576559607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.47410874101477	3.59729627233677
Merged-chr3-94366946-2	3.21118391926568	0	1.35563737451255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51756759-2	3.33795107955402	0	1.36353516191671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114854342-1	2.37581355184729	0	1.32522296857652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17250976-2	9.51469054223181	0.119262120778747	0.483395342675676	0.246717562727457	0.805126813564069	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69304596704114	3.95431861507375
Merged-chr13-99181390-4	5.62625611800474	-4.418398537042	1.2043714920011	-3.66863427637325	0.000243849612046258	0.00636619926039744	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26797449795796	0
Merged-chr2-119872713-7	16.8102244208789	0.609982207979633	0.394407749117237	1.54657764545675	0.121965123639654	0.718011979221334	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23055631454757	4.97311013015482
Merged-chr4-108387793-5	7.96914740373659	-1.00089901818829	0.634135804484666	-1.57836698560441	0.114481325157992	0.685691720785899	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17715851579946	1.99834080004871
Merged-chr8-121104229-3	4.03057178406274	0	1.32226012261876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100622529-3	4.94046938137616	-4.2695785947699	1.08881210530876	-3.92131808045903	8.80659220521626e-05	0.00285965180689971	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97048491176886	0
Merged-chr1-173580029-1	3.00445091472293	0	1.38040071873326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134106944-3	3.15939125780027	0	1.4766256555927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37140706-3	4.58571523490812	0	1.32847564908342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17485614-1	3.67838714514727	0	1.31184154806025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58422847-3	4.86379693102731	0	1.33168467381672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172456509-1	4.51613606992805	0	1.30422102978726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123019526-3	5.47626316902711	0	1.30597753585891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86960725-3	7.24260164152451	1.2310155821113	0.712315239802485	1.7281893090658	0.0839542898153701	0.543929905044138	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42813753232649	4.21192255592235
Merged-chr8-37898206-1	1.6296102040331	0	2.14732255823215	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46521513-4	4.73929756167356	0	1.30604115311114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9743244-4	4.7777140540949	0	1.31009652579388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173763271-2	3.14664202453389	0	2.1526906341771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41029539-3	5.34811625238408	0	1.31458898271902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131933686-3	3.36642182852713	0	1.34366614725592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110377001-2	3.63278486378164	1.39318104833287	1.28412481708202	1.08492650387262	0.277954208241915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.683637474991079
Merged-chr11-79920062-2	4.14066316530646	-0.391346988893896	0.98370521111538	-0.397829537214879	0.690755842947839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19560113903519	0.683637474991079
Merged-chr10-51518089-4	4.76872159418724	0	1.31555661587257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87695498-1	2.31011624695869	0	1.34992285096206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19910977-1	2.5011944041943	0	1.3455705996969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72850028-2	4.60361916395137	0	1.31315752484379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39100941-2	2.35130929687658	0	1.36153573647659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27688847-1	3.58169859773149	0	1.33118858955768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27743448-2	3.11726383729028	0	1.33395909256528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115480121-4	6.01183648479677	0	1.29911925216482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37323614-1	3.89433910577981	0.56527711588898	1.04346400522173	0.54173130367718	0.588003621629209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54140344106489	1.88772579123251
Merged-chr3-84443070-1	3.0419309644843	0	1.42975334839793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16204928-2	1.9611555664735	0	1.46158912020963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112030936-2	2.36689249427795	0	1.45949770679875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123019858-1	2.4695724040981	0	1.41556225083491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59312227-5	17.1886446007815	-0.150874646864988	0.442107159715642	-0.341262618234975	0.732905886872248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44129314863296	3.90842941853952
Merged-chr16-38442369-3	7.87194392903026	-4.1354151431721	1.03833116414683	-3.98275163643966	6.81219352828733e-05	0.00234536142412784	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05845158520208	0
Merged-chr2-167004643-3	3.89866447189048	0	1.31467792047978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99874832-3	4.49220455645193	0	1.33097620328531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-6694678-4	5.55680410101214	0	1.31407898916284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40774501-4	5.08549667726051	0	1.30409232163968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21436270-3	6.70749474587724	0	1.29897860237827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102522525-1	3.33985601330859	0	1.3542440333108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34764915-2	3.60401378262355	0	1.37888382703384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151977957-4	11.0139313684426	0.74455461484427	0.490193581743641	1.51889915040473	0.128787882919738	0.74522031322706	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51259515831511	4.06798680126691
Merged-chr14-118982809-2	7.0514880387996	0.351011600627577	0.795733797259802	0.441116868274697	0.659128392293152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64087609096512	1.72602775347308
Merged-chr7-106558741-1	3.07105232711699	4.44756648108957	1.12299064783198	3.96046617990626	7.4803587200111e-05	0.00251964701504044	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.66559184936653
Merged-chr6-89579977-3	4.08454723305512	0	1.3188797288149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87595697-1	3.55528225941614	0	1.3193495986366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152042361-3	6.81816838778658	0	1.3140874134507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80311107-4	5.76964699086692	0	1.30454869140298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102999034-7	15.4994357301912	0.807348410258641	0.603532523943309	1.33770489282608	0.1809926553867	0.94837190753743	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97318359725595	4.1693666644802
Merged-chr3-65538595-2	3.93629575769158	0	1.33515024772511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103745491-3	5.64456776063901	0	1.30843992428749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61607810-2	4.91359757000198	0.358530346192562	0.850414965102157	0.421594587237176	0.673320957788609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53950725374856	1.71702628909212
Merged-chr5-24077509-7	15.5042105756291	-0.189864793232109	0.387929303906095	-0.489431428150292	0.624536290371569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09816059272275	4.07834909717697
Merged-chr13-45375946-3	5.4851161483686	-2.3964858820144	1.0058950615379	-2.382441244269	0.0171982762500106	0.166593323426207	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69930427788511	1.29606516661881
Merged-chr14-62374180-3	9.84879427522629	-0.603358213051416	0.647135616598554	-0.932352041173009	0.351154621133093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77514790113192	1.57664565284388
Merged-chr11-74547299-4	11.8716440346256	2.06451886296091	1.0483419047536	1.96931826687415	0.0489165548262165	0.365022403982407	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.29948469469889
Merged-chr18-75895842-6	19.194524203153	1.00701732806167	0.470637257891506	2.13968892427512	0.0323799147317856	0.271861481185052	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09695828087277	3.97830136003053
Merged-chr7-116371748-2	4.1217970221468	0	1.31046474637227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84590360-3	5.71397569090842	0	1.34049796636882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117019312-3	6.94043735798486	-0.938647219750208	0.880673748502604	-1.065828544732	0.286501154811066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80408490974339	1.03956264035389
Merged-chr4-128664198-2	3.12556624629139	0	1.40206558455771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-133115126-2	5.46982650512027	0	1.31400695108057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137945701-2	3.91512625928312	0	1.36760590285284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186834106-2	7.2021563320755	-1.50589055871971	0.859606443202503	-1.75183721647018	0.0798018027679351	0.524356822893262	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66074674902689	1.04220233489076
Merged-chr11-97512393-4	13.2468736961311	-0.354790779592523	0.587304826597733	-0.60409988735804	0.545777234431866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94256803084946	2.35639125793769
Merged-chr5-113671784-4	6.5625669140483	-3.02747281859155	1.01877422623955	-2.97168179231075	0.0029617347422093	0.0440058022884059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18193819078378	0.729295484888209
Merged-chr7-66323464-3	4.92585302340143	0	1.3471223511556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122897090-3	9.9971700999955	-1.37370993437192	0.801910847652899	-1.71304570625602	0.0867041312852624	0.556558758641135	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34732129411734	1.5268023559189
Merged-chr8-10794801-2	3.51275917342292	0	1.39722184279982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29946173-3	6.78181821934913	0	1.29178849972625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102394100-4	6.71936559493237	-0.484505509018152	0.710299730318732	-0.682114167213242	0.495166763003355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30992530442004	1.67175145105019
Merged-chr10-21937531-6	12.9952473713704	-0.318136872201841	0.513879272718037	-0.61908874144531	0.535857899765562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46511162059748	2.64882921011897
Merged-chr16-91363550-3	5.54982271869757	0	1.34466413099145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54781114-4	6.49623860654367	1.84320974139542	0.793092176635177	2.32408009522366	0.0201212016504677	0.188076103998206	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11083935386948	2.00523365194985
Merged-chr10-84019559-1	2.22885100469091	0	1.46932129533853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53899419-1	2.94166948672762	2.08993038105628	1.21910660751483	1.71431306185489	0.0864712455179403	0.555609637130317	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.731605514577872	2.03283973350588
Merged-chr12-12164612-2	5.218870916972	-1.27048111117738	0.818874818689198	-1.55149612881134	0.120782834342949	0.713687954876059	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6758875702457	1.77338015316878
Merged-chr12-112717317-1	2.16471104050104	0	1.43707146083926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19494007-1	4.27110333083735	-1.25707843793226	0.956670174761817	-1.31401445461101	0.188841339969209	0.977671146859387	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15894834784923	0.773587911294612
Merged-chr6-31077976-1	3.91542671668055	0	1.33955676222325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100382697-3	5.67162964379998	-1.48644980623575	0.917269064409385	-1.62051666616802	0.105121337177649	0.644879731431716	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0770127775983	0.683637474991079
Merged-chr12-70119786-2	5.14951731562528	1.31140245796372	0.897126636953535	1.46178076087116	0.143801297860311	0.803746257781869	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994684322788013	1.05629245276768
Merged-chr8-80483433-1	1.77447347830836	0	1.48971073732734	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61370595-2	2.97621962341956	0	1.38957694739218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135494456-3	4.82777526816036	0	1.3164396774244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44261959-1	1.71587394324634	0	1.3969480625335	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3546843-2	3.31229243074225	0	1.32772949321634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38472317-1	2.68538614248384	0	1.35469874985544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37608647-1	2.96278619806523	-3.67312625646969	1.15905023924697	-3.16908286810422	0.00152920788159339	0.0263661261822167	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.484566336913	0
Merged-chr4-28990627-1	1.14537699570635	0	1.86830077861062	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141160434-1	2.12448261971875	0	1.40673752269448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102848129-1	2.59542177189744	0	1.40732458272881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32366396-3	4.64482407142598	0	1.40261224107142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65539981-2	2.81838772695625	0	1.37294326892696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25261332-1	2.15123761520428	0	1.41822032072261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91488250-1	4.11944909673325	-1.11159156345173	0.68600094929617	-1.62039362276716	0.105147748910997	0.64498120720342	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15712410769475	1.86123704904507
Merged-chr18-84784059-3	4.38153486609585	0	1.31328668626969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41684742-1	3.31547351770598	0	1.3304571751869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141661120-2	7.93764116192726	0.516349391638416	0.636055200731635	0.811799653622005	0.416906600862787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43722102334855	3.20258316248954
Merged-chr2-128316640-1	1.42030421126481	0	1.49961503487234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89163820-2	2.53698713386774	0	1.50370742906971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126705613-6	14.3343326991164	0.186500696944075	0.49376417316987	0.377712088235921	0.70564448680835	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78592006335739	3.21947168897144
Merged-chr4-86657345-3	5.93205978559831	0	1.31244305063683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96914267-6	11.4746384745782	-1.07810096670858	0.488550661862816	-2.20673320264851	0.027332704154576	0.238495202610953	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11409931435711	2.45651939465293
Merged-chr10-93592654-2	9.48178421545675	0.298343598451191	0.567204399032876	0.525989570884654	0.598895453156833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46245722911035	3.29602312433432
Merged-chr15-64260223-2	3.43512764086456	0	1.34587471056108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85114900-2	4.36816389572319	0	1.31517670939181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-53626163-3	5.37020549516562	0	1.32441847290752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53091033-3	8.75711735456976	-0.760939134753797	1.12012619213362	-0.67933340019874	0.496926638091268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.99794938816682	0.469435083901436
Merged-chrX-93886136-3	5.30652300355063	0	1.31835976370839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35346214-4	4.08549232376471	0	1.33748725385794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59569783-4	6.31083126818199	0	1.29873374831602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20105542-5	13.2586623378459	-1.52804366862296	0.59470792364266	-2.56940189944587	0.0101874231361747	0.112459610295286	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43971861094104	2.08153858449613
Merged-chr3-22143408-3	5.16467778719849	0	1.30334516660355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60454389-2	7.00959786177881	0.342369301131544	0.792342629700569	0.432097540001007	0.665670522545941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66143796929104	2.66903509972514
Merged-chr12-79359026-2	4.11497150674271	0	1.31151314087113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73718466-2	2.28086613885579	0	1.37002827695976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69033731-3	4.52929015804485	0	1.32396793181718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7878427-4	5.05976631269277	0	1.33779421134831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83872955-4	5.85649939392827	0	1.30029966409627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92467617-3	4.73295821781825	0	1.33749709236818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135490710-3	4.56211168490003	0	1.34547513553805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95090144-1	4.0669852134664	-1.66665391555163	1.08793143168904	-1.53194757225104	0.125535372808488	0.732767352560776	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37048624036614	0.916190436775555
Merged-chr1-138186914-1	3.15683957784388	0	1.33971547775079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148527938-2	4.40089520990038	0	1.32301596375873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86402476-2	2.65469830778638	0	1.35917422887946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119615215-2	8.1186166956499	-0.396638104054627	0.669226978120545	-0.592680984213374	0.55339466986481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82870890025352	2.40500539984967
Merged-chr4-6372448-4	10.4320733390344	-0.435235196005568	0.559882696859044	-0.777368542459427	0.436941366438616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82404884374317	2.57618756717262
Merged-chr6-126910508-4	11.6904453041564	0.32816575377202	0.503887271239913	0.651268195293966	0.514873375322941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65889982354121	4.16921841998578
Merged-chr19-7064785-3	5.03336476011531	0	1.29963545262493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107630354-1	5.68563487719023	-0.747470167656621	0.524346045118017	-1.42552837885596	0.154004522786168	0.845181787686651	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72717250255939	2.98770924392704
Merged-chr12-36469983-2	5.67544103215065	-0.0775305289661334	1.2361240859648	-0.0627206684558859	0.949988938747813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0.469435083901436
Merged-chr18-23914712-2	3.47341202955352	0	1.31702389479334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67647355-3	5.84427457843208	0	1.3062450450106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17565437-3	4.34107716181611	0	1.35344010204774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30998249-2	3.46604726170675	0	1.33216344891328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31984829-6	9.56668318654788	-3.19023210884613	0.965505777276303	-3.30420820250894	0.00095245069111142	0.018358054947547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16587093562581	0.469435083901436
Merged-chr2-102940341-3	3.74730345552129	0	1.3516549168499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81746647-2	5.64161018478393	0	1.29920906723625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120699756-2	2.5010324061382	0	1.4039838444918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44397921-1	2.7857269037802	0	1.38120790614452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71711007-2	5.35655639780838	-0.143435472329675	0.804372088226745	-0.178319803022855	0.858471827485603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53198770861037	2.07952021438838
Merged-chr8-79475281-2	2.97944994578796	0	1.34281077263979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32565945-1	2.99927581710704	-0.638062916825279	1.28800690037494	-0.495387809366192	0.620326398223525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34318600790585	2.03873341423583
Merged-chr8-125783607-1	1.87834677174144	0	1.34568224312533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26576394-2	3.28069260808661	-0.857573391595504	1.34744972719854	-0.636441845870175	0.524488473651871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0
Merged-chr9-56891609-2	3.40071283101436	0	1.33528050956606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60982155-3	10.3825899337353	0.0435993473617913	0.485664227845028	0.0897726142097161	0.928467910992554	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10949952197241	3.11038056962808
Merged-chr1-51667873-3	6.12264427174922	-0.878370217141706	1.25166386786295	-0.701762062239129	0.482827561660163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0
Merged-chr16-21631868-4	5.89188141958983	0	1.29536359098098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138983383-5	7.90169508720255	0	1.31149678548394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142376261-3	4.94999934442886	0	1.31263169824251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99002084-2	3.26585642229197	0	1.31851063683969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61126359-2	8.95182446154401	1.14869450993624	0.625612337779647	1.83611230240929	0.0663410491779617	0.456761373889272	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10132680821784	3.31279000643091
Merged-chr19-20881485-2	5.85949014014981	-2.27746761157637	0.795254967880088	-2.86382066577644	0.00418564911764523	0.0567933889043268	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67278710991586	0.793480537552656
Merged-chr3-135579465-4	11.0924422374727	-0.850189068537869	0.5962157973673	-1.42597541409006	0.153875438982304	0.844757156661145	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55888796071682	2.89709308729957
Merged-chr19-23116437-2	3.40532252610452	0	1.3722940530494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45911391-2	3.74096069009426	0	1.32098838308766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66825586-1	2.13562094454328	0	1.37307818783852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126936184-1	3.14939538284988	0	1.33546842655418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108834492-3	7.2314041255788	0.149664212736805	0.573076480537923	0.261159230607966	0.793969716604772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66098136942721	2.73498516217529
Merged-chr10-57571431-3	4.38591547523534	0	1.31201308602021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103655263-5	10.2197028176116	-1.13091015752438	0.56666512545037	-1.9957292353673	0.0459634030545509	0.348517583662414	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10477419832392	2.9185122841552
Merged-chr7-139950523-2	4.88737817937109	-1.40342761395104	1.32270091041558	-1.06103171389675	0.288675488809583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	0
Merged-chr12-17717384-2	9.13861294396084	0.78219670994568	0.550389587551313	1.42116916387477	0.155267586878454	0.850114430847041	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10372205679614	3.06047030868957
Merged-chr4-149779068-2	4.67842321565775	0	1.37874140766522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125160492-3	4.52780128858984	0	1.32884316556168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-48131018-3	6.60455229111532	0.111887956281097	0.696210533260381	0.160709944673088	0.872321856535415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36422133968827	3.69697713284534
Merged-chr5-124050982-3	12.4571346796463	0.669067347579947	0.54103492268039	1.23664355022641	0.216219444276468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76675285851523	4.06178072097658
Merged-chr11-62808174-4	4.98658649949309	0	1.31065651661217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62033445-7	16.627635831837	-0.455317551972699	0.364924860417266	-1.24770220217958	0.212140134544432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.83956449400241	4.20561360181268
Merged-chr15-77798787-3	4.42987764894618	0	1.32390071707484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-74104707-3	4.59663802690065	0	1.32582984812365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37638768-3	4.4175419832323	0	1.32543930379476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34831338-2	5.24184606643486	0	1.3313168759173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108612123-4	7.69557167105632	0	1.29242604315231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45034183-2	4.15848814450009	0	1.30777475221955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24012344-2	4.2883476659176	0	1.31194074119847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77743775-4	9.3221748723307	-1.29985022023098	0.903424452431749	-1.43880345139228	0.150206218250697	0.829772215555843	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03134938591282	0.73596151290311
Merged-chr17-87249234-11	46.9385864546067	-0.227145540020647	0.293565186533484	-0.773748218250459	0.43907969956233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	6.64605413796049	6.41051199754813
Merged-chr3-37728293-4	4.97947571261663	0	1.30268135643972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45155791-2	4.92568420388348	0	1.32129404452388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80693576-2	3.74088367803109	0	1.32430719055516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37414641-3	3.42871681120817	0	1.31705423115688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90017385-2	5.89352194527439	3.43016055315487	1.07612680475297	3.18750591287638	0.00143505523801601	0.0250668590172131	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.7204458171722
Merged-chr15-102274185-1	2.17601316890531	0	1.35865963752903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76762549-1	2.1855272663327	0	1.37506249700645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62169471-2	2.36923459432444	0	1.37497297145095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64537399-1	2.59720731556033	0	1.35878244870661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35051126-1	3.47254128147713	0	1.32097329019375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29748915-1	1.57930888175815	0	1.65317389972273	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34644846-4	4.20812998885896	0	1.34080103484012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143008754-1	3.26440941103548	3.17138380746718	1.16575685762774	2.72045048392063	0.00651930348646479	0.0798893049054299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.13132003301738
Merged-chr16-55152595-1	1.38798247794361	0	1.47734379972416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22459642-1	3.6256403374949	0	1.35636414984199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139687839-1	3.7891757675094	0.376499084276057	0.755648044664258	0.498246620148855	0.61831022666203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49720049477818	2.29634386091912
Merged-chr4-134607911-1	1.46552940478741	0	1.43826751347007	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65328171-1	1.60287022977476	0	1.64286152320751	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47911825-2	2.93422334345708	0	1.34626516828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8769693-2	3.64034389134141	0	1.41211535197084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99421765-1	3.43679523903441	-1.55934910296377	1.29186761141748	-1.20705023423631	0.227412798650485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	0
Merged-chr1-36131854-1	3.05408732036284	0	1.35081914884634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40602447-1	2.91595322231539	1.40712670138903	1.3324712938068	1.05602777930694	0.290955523554335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.563523181795778
Merged-chr2-31026871-2	2.1415004007805	0	1.42950761355446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40912948-1	4.61687873053331	-1.66490690918466	1.20561980670976	-1.38095517336294	0.167292744012816	0.895104532077416	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21292679531366	0.609949614787909
Merged-chr8-4201517-1	3.32330250691766	1.77251768313739	1.22580276769941	1.44600561350017	0.148175627341869	0.821820110701218	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	0.843323834477631
Merged-chr2-150897245-2	2.53902095600774	0	1.48732402114923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159080711-1	1.81912524623892	0	1.58418475330893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5746236-2	4.49513618772234	-2.4862763737215	0.981090954367299	-2.53419559384776	0.0112705802654553	0.121434628934183	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08915041701623	0.733321818366247
Merged-chr3-117328932-1	2.26841598376112	0	1.36822165281764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55561989-1	2.88488469532986	0	1.35284688187844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51733735-1	2.9179980531115	0.214966621733388	1.35430440614146	0.158728437091812	0.873882832646207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0.306240821987646
Merged-chr5-121918715-1	4.44762102805502	2.42364367328777	1.15847551149036	2.09209745846919	0.0364297984725344	0.295096270111099	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.855026762206016	3.43680635795313
Merged-chr5-125059622-1	2.25393701935764	0	1.40858421576758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112863403-1	2.14566445945251	-0.618995819750033	1.01073536813209	-0.61242125215622	0.540259084488751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84342505827887	1.94767211644437
Merged-chr11-35657313-1	2.79359450292529	-1.08731219272535	1.50914874852428	-0.720480465420379	0.471229222961343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	0
Merged-chr9-21787087-1	2.11996697019379	0	1.3646126624703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-10539396-1	1.78892528754737	0	1.40300655705139	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48776827-2	3.43713587230152	0	1.32597343531357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143057397-1	2.92140711986359	0	1.3253653771252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102579960-1	2.82216038731048	0.00986816279148369	1.19664767621654	0.00824650645934816	0.993420314390719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	0.469435083901436
Merged-chr11-78360248-3	4.11389076616275	0	1.32192922520286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85241076-1	1.72830298096744	0	1.4254069376265	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61581439-1	4.71809022796834	1.8500564417645	0.971558064942273	1.9042160304381	0.0568820548106255	0.408059584329249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.879666828835773	2.35601144634977
Merged-chr6-106645886-1	1.98578795731027	-1.42130101479548	1.14477985223259	-1.24154964120273	0.214402771856299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16896319176978	1.20997209872237
Merged-chr3-8767062-1	3.08749795460346	0	1.36238642117137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119909666-1	2.24128788567928	0	1.34049972693461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19904869-1	2.78113066051028	0	1.34874541267589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113751910-1	1.83573323612431	0	1.46716886946545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30148591-2	3.15316963481385	0	1.35637441745495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21027967-2	7.47448001880032	0.955864234668246	0.532610128007827	1.79467904270532	0.0727048514600288	0.489538508346939	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73266124058001	3.50611651075361
Merged-chr9-46215796-3	5.21470679245918	-3.80310504898855	1.15464453070361	-3.29374534573948	0.000988620207058569	0.0188620076059706	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31040660743316	0
Merged-chr9-47628750-3	6.91908634507221	2.97012975209672	0.934732730564252	3.17751765288437	0.00148541646886837	0.0257948510695382	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	1.76331258957479
Merged-chr13-113800415-4	5.99146694680736	0	1.31222921349609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39635594-3	8.2909744364011	-0.032254630031847	0.679612987049387	-0.0474602908515388	0.962146377960949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97378803925801	2.48322226672997
Merged-chr3-62492780-3	5.5693596273655	1.07831853764517	1.01119924096199	1.06637593657539	0.28625373499571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.836760058890005	0.793480537552656
Merged-chr14-14632666-2	4.31378516969106	0	1.29881737147367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114647831-3	5.39428515748659	1.65416761008338	1.01613186722992	1.62790643953803	0.103544725781865	0.6379628183049	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	1.34591112769102
Merged-chr3-109047917-4	5.29004336378661	0	1.30821817778541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23015062-1	2.71138394091708	0	1.32792113744066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55012012-3	7.0989167107434	0.87271056751332	0.577989496462296	1.50990731294414	0.131067076409047	0.754540964230047	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69815442338024	4.58448666264148
Merged-chr9-54567004-2	5.13356117995334	0	1.31059125748536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59202418-2	6.20296906478642	0	1.30122059189217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-26035203-1	2.42396802056015	0	1.39908661668403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108527607-3	6.79619519651095	-0.629500101905107	0.774879606116764	-0.812384397441801	0.416571096235014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76457409176742	1.96819405909084
Merged-chr11-20586402-3	3.89057043369062	-4.50059169202415	1.04299030788651	-4.3150848651164	1.59541601044657e-05	0.000735737858988294	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29785518269073	0
Merged-chr8-81349627-1	6.15934946918726	-1.97313556550358	0.667908409763364	-2.95420081056121	0.00313479951361503	0.0458577589023255	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09158031327298	2.30944904015933
Merged-chr11-75152904-4	5.37481765699869	0	1.31005194620606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105262776-3	3.91412463373927	-3.3075933601083	1.17435718686203	-2.81651391681473	0.00485479396075902	0.0636647333252577	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6536296956908	0
Merged-chr8-67714232-1	2.27739122697554	0	1.45878919722524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-108155874-2	4.28366068602477	0	1.33974444229367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52488004-4	5.1046944006009	0	1.32108468048805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139249485-2	7.23655859425008	1.46241242421048	0.847130043298599	1.72631396534593	0.0842909442769413	0.545570131212461	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46849460623985	2.60176896768057
Merged-chr16-43448259-2	3.42160886470889	0	1.31571463209752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33039605-2	3.80770782089996	0	1.33273664883596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41071699-4	4.73279229300004	0	1.30219655382419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59561937-2	3.90435522075986	0	1.33413717767975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44437606-2	6.66563703052811	-0.903803548939451	0.789602097752193	-1.1446316461321	0.252361777363035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0473931765927	1.42629324027793
Merged-chr8-94076958-4	5.83676608241921	0	1.30932517604028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122089088-3	4.53240119806887	0	1.31205513640302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66096902-3	3.50969140945492	0	1.3153074069894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28543808-3	4.39439466456469	0	1.33787714902771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11061037-3	4.37669874807107	0	1.31887602099081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133087850-2	3.15134368942192	0	1.32787560207891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31403311-2	4.78483919594914	0	1.37072226874653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32507008-1	2.23468590004665	0	1.53885550143515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121847169-2	4.17507212928066	0	1.39960452293321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92269196-2	2.91491785167203	0	1.34157666215003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125446158-2	8.39979723300593	1.48326723201684	0.84374182811055	1.75796337528794	0.0787537412248895	0.519507568552557	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18822733725188	3.04809232948217
Merged-chr8-36523883-2	5.84416433742669	1.53345558689542	0.920661896228047	1.66560123013452	0.0957928659757733	0.600331283492593	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65963266404391	4.27358406210341
Merged-chr1-54815309-1	6.23422250380594	-1.79651960894362	0.702932780732211	-2.55574879730644	0.010595958186584	0.116035962160762	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99967035159079	2.03247245696714
Merged-chr2-16353064-2	2.42394535828175	0	1.42013786691089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94582238-1	1.73395078760801	0	1.49446661650487	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96499650-6	14.5578545934535	1.46060824460793	0.490111629294539	2.98015422876277	0.00288103288858347	0.0431209845626299	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60226348497987	4.05592650899962
Merged-chr3-85601968-4	4.73899726240584	0	1.30664282543732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23535210-6	13.4237866080629	-0.640803790761519	0.570498897810077	-1.12323405570338	0.261338102428597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89555355399266	3.43782267534944
Merged-chr18-67167207-3	3.73852945006843	0.00316811822718693	0.873741555278809	0.00362592142727604	0.997106939613819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78089798840208	1.93227003100029
Merged-chr5-135537951-2	4.2689269804484	0	1.30411302337358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11820407-6	10.6039717176687	-1.49873035853871	0.63374477311399	-2.36488003076459	0.0180359123476396	0.172989098527647	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55141685898275	1.52944205045577
Merged-chr2-168574058-2	3.11372794908576	0	1.3493772436414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74004370-3	4.86186027544316	0	1.34789631323362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25009451-3	8.79370786191957	-2.34738761660573	0.705604875371562	-3.3267735223196	0.000878577477602221	0.0172045321700314	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06201909259804	1.65117231954624
Merged-chr4-58968176-4	6.70851266995948	-1.44156200428659	0.9964539343666	-1.4466920693157	0.147983186643764	0.82110124092922	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69470474459763	0.73596151290311
Merged-chr13-92580467-4	5.20049910753588	0	1.31449469999252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125472250-11	33.972085005135	-0.131888936138679	0.269438492057666	-0.489495525050861	0.624490921899796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.51874894990279	5.37344810316111
Merged-chr2-167001108-2	3.54558521121619	0	1.32845650394661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68119934-6	12.3953641102506	1.00356040553407	0.555226831898314	1.80747821949258	0.0706877476985961	0.479215848232437	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74064554309087	2.94237644528548
Merged-chr8-128351299-1	4.14684201657459	0.359241933974767	1.02413778123678	0.350775003672782	0.725757151289073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42127422289328	1.34106889333198
Merged-chr14-77806518-3	7.59644131818289	0.300125715018383	0.795967547735336	0.377057727883872	0.70613070483819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48612796240113	1.41695929335733
Merged-chr10-93140979-1	5.32607158432811	-0.449767596221373	0.765364975956251	-0.587651134231	0.556766481343542	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75456263189254	3.25678311475824
Merged-chr3-103927725-5	9.62109703609518	-2.73980820185108	0.798225591477179	-3.43237329284425	0.000598323390110613	0.0126326462843839	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59983436285015	1.29072512625674
Merged-chr9-59733036-3	8.49513326967694	0	1.2888679769468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102655544-6	13.99608609158	0.671200572563347	0.432632209379522	1.55143458580205	0.120797572244884	0.713710502343057	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79154638842773	4.50257340017456
Merged-chr1-171382376-4	11.3991313463589	-0.755006627692841	0.606882154536346	-1.24407452427014	0.21347213617008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56894332825196	2.31988985506067
Merged-chr15-79941127-6	14.1035212387681	1.63281668934313	0.447495771801148	3.64878685394305	0.00026348159184043	0.00673873506865156	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19758997044191	4.91455037837932
Merged-chr13-9846976-3	5.38229633322845	0	1.3359965986877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45883133-1	3.8195623016212	0	1.34413819294253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142797823-2	4.11599305197497	0	1.34288098865768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122845098-2	4.20334341056362	0	1.35582362702315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110672665-2	4.71172673083382	0	1.3066048320456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4616472-3	4.58126304310445	0	1.42205713557367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54294872-3	5.62134744506396	0	1.30096512767205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101503582-3	4.43073503884379	0	1.31226023344657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94144222-3	4.67350929784192	0	1.38666370622985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135883433-3	4.6123538875546	0	1.30783354175801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40797221-2	3.32081202160037	2.84950288785773	1.25388471915543	2.27253976727386	0.0230539289312048	0.209379018754483	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.04220233489076
Merged-chr7-14533647-2	3.55114809311401	0	1.32795612681856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15890716-2	7.1457459045091	0	1.30625903784119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129808585-4	10.0261926565674	0.714995112664477	0.58423017174608	1.22382435423967	0.221018494885248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31057941913074	3.11913156255547
Merged-chr8-123036201-4	7.85375720477272	-0.33805248857309	0.646780092181878	-0.522669903819531	0.601203985501517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32668494009607	2.3022060396979
Merged-chr7-113193217-3	5.86481557504993	0	1.31791942003744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47627035-2	5.65480484513172	1.98264751068864	0.793375804947387	2.49900173199777	0.0124543702341996	0.130927168166668	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10302531769481	2.81960882153758
Merged-chr5-90907811-2	6.19338009696817	0	1.3098186287433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47199250-2	6.68653201577445	0.0183676129838769	0.693552618113869	0.0264833734372283	0.978871795023565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00171736959436	1.57928534738074
Merged-chr16-91512512-6	17.946867939321	0.40598804902447	0.393357031681094	1.03211082127957	0.302020205072476	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23225577290292	4.53204063422592
Merged-chr6-122572511-3	10.6349485341066	0.914386673856838	0.676352661011627	1.35193771913188	0.17639523984116	0.930700310267293	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70836277709355	3.70625703709904
Merged-chr8-90834273-7	18.7582607313981	0.301604270877018	0.38409640124308	0.785230660586544	0.432318341856754	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93339262190769	4.17924990378285
Merged-chr11-21453434-4	19.9275977943363	0.0076463878591693	0.419365234866637	0.0182332421083997	0.985452783672514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96927769367138	4.78799280066837
Merged-chrX-142383061-1	2.47934362409295	1.97462119395807	1.27787532489604	1.54523775167089	0.122288765996946	0.71952833628997	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.733321818366247
Merged-chr13-12469711-3	4.97200146920962	0	1.30590770391518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133144703-1	2.95048027787586	1.78473072127362	1.00203737776298	1.78110194377975	0.0748957982644396	0.500657171012028	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903383975461927	1.9001726754443
Merged-chr1-131439228-3	3.17711792445672	0	1.33004917071304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21651918-3	3.40558769431638	0	1.36533929700224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82909009-1	4.17392217496793	-2.77003480066471	0.840809912562544	-3.29448399605858	0.000986025593036264	0.0188289971953675	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0189483371997	1.38660038197036
Merged-chr4-8709737-2	4.46264041805741	0	1.32733452709086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-3767891-1	1.39166237717899	0	1.69992003436645	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47911188-2	4.90717946953719	1.96439124527634	1.11491904481377	1.76191379491993	0.0780838635052731	0.516287376769764	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73348252654836	3.19204450665405
Merged-chr18-88981076-4	5.09571514388609	0	1.30488014175898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117028016-2	2.74031060015187	0	1.37592025876105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52082575-2	3.2376641273526	2.75443311562098	1.21745392547871	2.26245368138915	0.0236693874951643	0.213558356907776	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.963545719069792
Merged-chr1-137910452-1	1.64681968475736	0	1.53179873976809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-48630927-1	3.69029575220002	1.60318769244803	1.22317804953896	1.31067402088544	0.189967919344746	0.981797415881775	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40217439211173	2.85613454360125
Merged-chr11-102900952-1	1.80082953074765	0	1.45859699486393	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-31519637-1	2.29438501079823	0	1.4420366319363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35209628-1	3.10512034307441	-2.81694429511647	1.23395031950943	-2.28286686309735	0.0224382119304189	0.205098251056813	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06586050752894	0.306240821987646
Merged-chr19-36410245-1	2.86093676653633	0	1.32438829974355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-45240817-1	1.14735118834426	0	1.63645436803956	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100810437-1	4.22251027648213	1.09396765302728	0.950956590762619	1.15038653041984	0.249984705391482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.901400916676301	1.36759862365701
Merged-chr13-19854235-1	2.3353671212583	0	1.36818129105269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62032301-1	2.14652346838641	0	1.4401217915553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132308048-1	3.27857903377461	0	1.33891403798657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167164985-1	1.98920706089833	0	1.40448947927934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69532742-1	2.67502958104689	0.0964498451162421	1.43457103050087	0.067232533674242	0.946396585583404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr9-95689169-1	1.87546871973155	0	1.46656328702886	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29940859-1	3.92962173512444	0	1.32870509207713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110372390-3	3.75280545202119	0	1.33784183377838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-14459012-1	2.79808975974031	3.67610498333088	1.36919838226435	2.68485928039983	0.00725603493229808	0.0863607182219284	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	3.07655486584737
Merged-chr5-93120649-1	3.33824799552288	4.47401385898917	1.09780496245503	4.07541777638161	4.59318100621396e-05	0.00170450806905767	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.37850366884776
Merged-chrY-90803612-1	2.52072103061663	0	1.36443125266565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36617043-2	3.43505284782315	0	1.33852059641611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155519494-2	4.21242842996451	-1.81772389180579	1.08807495906282	-1.67058700934669	0.0948032801685851	0.595674533259265	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74506098989431	0.469435083901436
Merged-chr6-73697270-1	2.33308487275374	0	1.62199807743809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97604044-1	3.196274955485	4.89810262777697	1.07229453765046	4.56787053910518	4.92704175287128e-06	0.000285934698386436	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.64695715578682
Merged-chr1-9991981-1	2.50507049371558	0	1.41887317866703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109860809-2	7.74526694942559	-1.3891563115451	0.739464249407278	-1.87859834016125	0.0602993579718584	0.425197925655163	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18893165039678	1.428339764855
Merged-chr9-114649900-1	2.25131482867255	0.74085281222592	1.03522730154632	0.715642652699851	0.474212029578207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86802421073516	2.26192334845542
Merged-chr12-99741813-1	1.87958995599211	0	1.43009360425324	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81921829-2	4.0137857135186	-1.24444873773157	1.20996427141914	-1.02850040048867	0.303714502542567	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	0
Merged-chr4-133204551-1	5.6289020629439	-0.11138558171814	0.839058831515252	-0.132750621928369	0.894390606607588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7864556494463	1.54311005189624
Merged-chr6-148722426-1	2.51690362146901	0	1.36876479231061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13636536-1	2.48017851624464	0	1.41791199337622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53968289-1	1.52458715030542	0	1.6194812261187	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14174156-1	2.45145153962099	0	1.37231940105554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125325358-4	5.24472629544087	0	1.31119814601291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122637909-4	11.229804058305	1.02205775640114	0.449034947042762	2.27612074100728	0.0228387840086751	0.207974244681003	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03301689776394	4.21378350424249
Merged-chr5-135145788-4	5.10329063250619	0	1.30143575378212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55630435-6	14.9894741846144	0.557250612306591	0.387940461106466	1.4364333400987	0.150879071844601	0.832433622826519	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19233125296605	4.78312351964104
Merged-chr2-113491634-4	10.3902716257841	-1.3723945071534	0.486866126283898	-2.81883341860004	0.00481985245330061	0.0632700036989518	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.81125835073487	2.87932281384331
Merged-chr7-135680488-3	4.48454024751191	0	1.32474305765171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64600142-4	4.54676144596389	0	1.31844229053331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-100937619-2	5.7880925632119	0.53971314201645	0.809796752159545	0.666479756281013	0.505104498833325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47722888407959	2.06305880009184
Merged-chr14-51238309-4	8.69550543797786	-0.890856118297014	0.488997655904945	-1.82180038603331	0.0684852791705891	0.46792545511097	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27703692809896	2.92969475338069
Merged-chr11-97404441-3	4.74352101048713	0	1.30279842363816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92470904-1	3.41601041722311	0	1.31287956678729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16738119-3	4.97718289345878	0	1.31744954654663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95533120-4	4.63892771626462	0	1.32707498594912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65586064-3	8.29798243188327	-2.5037761946264	0.780345398690654	-3.20854867450682	0.00133406725691897	0.0236887553093682	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79783675553307	1.48219169541115
Merged-chr5-90589095-6	18.1100636615717	0.469217753869837	0.389839524028307	1.20361770664322	0.228737372489687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08333073440168	4.54601966489038
Merged-chr19-29563614-1	2.22007228264223	0	1.36151709490331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41288771-2	3.05121576593709	0	1.3407521431318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60368073-2	3.49758259991862	0	1.36376688737927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46360115-1	2.24243363556311	0	1.35242711613793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6209376-1	1.33574014503297	0	1.47429048737525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41468822-2	3.75022715232056	0	1.33822251360591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73839779-2	3.86508452157696	0	1.34260861068001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28601927-2	4.00817711642619	0	1.36469886241172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132898452-4	10.1311309435054	0.852747712335298	0.882383615027004	0.966413811196166	0.333837155824559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	1.26501898168246
Merged-chr13-43774385-4	6.50714741357076	0	1.34261601633082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148535845-5	16.2301687851467	0.58814391443321	0.484145705170043	1.21480766668506	0.224439456080011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97260583231506	3.45516220101362
Merged-chr7-90214805-2	3.71025101402331	0	1.31158603065026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100731244-1	3.37177586924239	0	1.37360739020089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178330732-2	3.57377054509482	0	1.32266075518234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73846812-1	3.28676537147856	0	1.33226435598929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39301082-2	6.66690778016149	0.179343088851722	0.654547873787721	0.273995373041095	0.784088177425762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78827270719482	3.89659260029972
Merged-chr15-10872636-2	4.9805609613258	0	1.31724026698959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112103097-2	6.10342743240256	1.42084735608417	0.68317912391112	2.07975815764098	0.0375477207515448	0.301646589652133	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63192981281099	3.24228330018863
Merged-chr8-22945035-2	4.07873602080305	0	1.32679571751922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10981626-2	6.2702026889529	-3.63634753175298	1.03472363082303	-3.51431766264061	0.000440885234308922	0.0100069769090486	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69044427814761	0.609949614787909
Merged-chr11-60838784-2	3.20721486977215	0	1.33129137428621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20568483-1	1.97538054445348	0	1.35319879355694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84661878-3	5.46654589826706	0	1.32419705970003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-157801867-3	6.31727596230515	-0.0902403506683432	0.619667845764008	-0.145626969811679	0.884215876118148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41646917297594	2.77661210132932
Merged-chr9-75404906-3	4.7658758350888	0	1.3112335103604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36580846-3	7.43978359184818	0	1.32199612149943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54022588-5	10.2403755959771	-0.391163109344468	0.635969757857587	-0.615065582146849	0.538511410601884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13541528160042	1.63879159991986
Merged-chr5-65722708-3	5.63914884344884	3.62299484370455	1.05856427354246	3.42255537453599	0.000620354605449811	0.013017884408389	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.67113172082159
Merged-chr12-100926452-3	9.15272199566212	-0.164449083708847	0.533357137097426	-0.308328270628931	0.757832556359594	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26375047601024	2.67382049396586
Merged-chr8-35859743-1	6.47363352054478	3.19669573221487	0.932284370415673	3.42888482705076	0.000606066656032313	0.0127590308328246	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00568480955735	3.37653966732529
Merged-chr10-12090923-1	2.97009868088163	-1.36901927994593	0.931139961648188	-1.47026154641957	0.141490931381449	0.795685576768687	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19571255687313	1.47711801254374
Merged-chr1-36869816-2	2.46000015363896	0	1.36538853646692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176862363-1	2.41612863501686	0	1.39244970457862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105998460-1	6.10205981103796	0	1.2994545331117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86191561-3	8.32814809303514	-1.00969181458646	0.639630752663409	-1.57855420550392	0.114438345644023	0.685497124801018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69358320835534	2.64408756083383
Merged-chr15-85383619-3	4.28663769424741	0	1.33780865636272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4338399-4	4.66673655654446	0	1.30835664082522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-48086681-2	4.45320228577474	-3.54532953831347	1.17362608527183	-3.02083396305248	0.00252079548639463	0.0387859434551315	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96414463626386	0
Merged-chr4-59352147-6	11.8220103675215	-0.187658272156606	0.415489293600983	-0.45165609570875	0.651516751660187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06027593952291	3.70523200673749
Merged-chr4-134249823-5	11.661695675914	-0.297602857754224	0.492401746231383	-0.604390337832756	0.545584158093568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24832802216993	3.08251563949621
Merged-chr14-70181309-3	5.41727280086296	0	1.31113971179351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75437771-3	3.31742028936536	0	1.33680845843769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111894872-1	2.93609096290073	0	1.39411347018327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-70643870-2	3.83819446099419	0	1.32024534934375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23900255-2	3.06032023906377	0	1.37870362563001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145289210-2	4.94039436151484	1.29841563850605	1.23221107410902	1.05372826603178	0.292007343906564	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.581381506691384
Merged-chr5-32073535-3	13.3835486353119	-0.894010269003181	0.440135473226153	-2.03121612182305	0.0422330756660267	0.328504054573525	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.93925474264232	4.14415082679286
Merged-chr14-47542539-3	5.70027832769453	0	1.31585263350933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53237674-2	4.53236071623165	0	1.29956382608973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89989100-5	9.35267188382833	1.78776392886308	0.723002316397196	2.47269460735854	0.0134098680815075	0.138127559844608	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29307377860815	2.45510301525348
Merged-chrX-13243049-3	7.2957311724337	0	1.30403983056146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13600148-3	5.30022232828203	0	1.31513715666336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165724383-3	5.46056820397852	0	1.31716499568874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69592613-3	6.0726592374308	0	1.32706601312579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79728406-4	6.49058023928238	3.78898303149643	1.04161239022546	3.63761324947019	0.000275176209588633	0.00696423880394221	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.63267172601457
Merged-chr8-11203508-1	1.50589145291888	0	1.48816321584183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87223816-3	5.22312688123815	-1.3524710430426	1.2282657912024	-1.10112245470796	0.270843365387892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	0
Merged-chr7-4705282-1	2.34596815108214	0	1.36395069473914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148673317-1	3.4954078277971	1.91496068471101	1.26112158662945	1.51845841433025	0.128898875378692	0.745664475079321	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.73591966271651
Merged-chr4-111350956-1	2.049096943698	0	1.40173371497737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113023242-1	1.34854440940264	0	1.62383578409841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141497195-1	3.88097193621767	-1.01386480649752	0.774743307784222	-1.30864609776003	0.190654258219178	0.984005462253406	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87479432998533	1.81518459389541
Merged-chr14-101511152-1	1.53739632057912	0	1.42347372088714	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35795618-2	7.40018285962381	-0.685371686652026	0.5752925453765	-1.19134463354377	0.233518318697225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48765243862642	2.91665652935043
Merged-chr1-77831990-3	4.05514432237928	0	1.37369391140014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148770533-2	4.07328493958823	-2.00673493364827	1.19219310016289	-1.68322978330782	0.0923306173009123	0.583560936081382	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33356990652778	0.420961122473315
Merged-chr10-28425594-3	4.03537625684139	0	1.38795557935854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40940256-1	1.69298726360793	0	1.45058103579936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126075610-2	5.49981814952243	-2.72789760863442	0.953409370549569	-2.8612028504209	0.00422036923723015	0.057121840964383	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35149955238169	0.851599296279844
Merged-chr2-49538258-1	1.85108709675284	0	1.46564967377734	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119070621-1	1.75260695473634	0	1.57328949442606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116460153-1	10.3458421963133	2.11418241036814	0.576236813356898	3.66894714353957	0.000243551422289304	0.00636195404709443	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15939558394108	4.41539580693535
Merged-chr11-96833176-2	4.64568817078531	-0.530856078976873	0.736298211294978	-0.720979721033438	0.470921991649104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24452891628656	2.83401906140125
Merged-chr12-82257029-3	5.48176392574619	0	1.30625961627876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8881146-2	4.25011769459933	0	1.29886773842144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13549974-1	1.63737705431795	0	1.58466762835396	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111050595-1	2.8991687638728	-3.68812782811377	1.29229151038167	-2.8539441747354	0.0043180118366198	0.0581303670118989	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86083072944146	0
Merged-chr9-120817072-3	3.99185439040308	0.114763731994314	0.980670421823736	0.11702579117344	0.90683961550142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41432260024777	2.08650287127638
Merged-chr16-42165131-3	3.40204964191595	0	1.35285536247418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34398210-1	2.03701705401654	0	1.57340969033158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103327756-1	1.45645707171354	0	1.47326744068386	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77356202-1	3.27558172617369	3.44173259479924	1.22656643703597	2.80598954192509	0.00501623203478756	0.0653229769918749	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr11-99165665-1	1.4066089204735	0	1.43644460909621	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31107891-1	3.04312820174471	0	1.38297187866084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85129794-2	2.61583315918479	0	1.39315653157642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86292804-1	1.64338611836378	0	1.42356961186127	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52941079-1	2.19561236999168	0	1.34394980526028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57385410-1	2.47422542985193	0	1.40520187373137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73325743-1	2.17974484788651	-0.00572945908933324	1.24838673879309	-0.00458949050906479	0.996338129236126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03337619474158	0.733321818366247
Merged-chr4-145239891-3	4.80805980133729	0	1.3911966041739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102878603-1	2.33938062925162	0	1.45155454690953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6373435-1	4.28679984341323	-1.82343505645126	0.746313260953621	-2.44325694296431	0.0145553703154151	0.146409597364693	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53843898924798	1.29915063860089
Merged-chr18-11832990-2	3.70352993135224	-2.52882499736136	1.12353885330949	-2.25076773260886	0.0244002522517217	0.218508823302865	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51160177565841	0
Merged-chr15-102108153-1	2.83405859811535	0	1.3611158807889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35578238-1	2.0602495150321	0	1.57479493279133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116522952-1	5.8431711303886	-1.07645809621055	0.741498263235711	-1.4517338065138	0.146575635456644	0.815406054968008	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84205139020489	1.81579024618537
Merged-chr7-18843058-1	1.92860497537804	0	1.46817993089885	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55102658-1	1.97063733088363	-0.609939908526412	1.36165593468514	-0.447939815771045	0.654196632254116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12203515284301	0.61242769162773
Merged-chr11-29227086-1	5.0035272867457	0.386644968198402	0.832629324493707	0.464366263383178	0.642385356574079	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7451997487998	3.63729084193128
Merged-chr4-132589343-1	3.13850274931763	-1.48159061041708	1.00149142235079	-1.47938422372042	0.139037654151249	0.78581167169759	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27203169451987	0.581381506691384
Merged-chr19-18618914-3	6.44931183903456	-1.80427349856157	0.677000439188575	-2.66509945063566	0.00769655580973089	0.0901971190714984	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64456204844094	1.42690496303314
Merged-chr7-73628308-3	4.72643112764233	0	1.30464403871058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127557894-2	4.4357519730964	0	1.38540903588227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147751809-3	4.53290833139577	0	1.32603307660807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114954710-2	4.43521279442246	0	1.34276330901593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85155323-2	4.03755050412844	0	1.33181186334653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114916471-3	4.01402224493622	0	1.34126856717425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85693368-2	6.1517603560678	0	1.31329802827426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115740205-3	7.85379612657988	-0.81139732404607	0.849169785775602	-0.955518363509564	0.339315623369561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2711229347155	1.15658857927843
Merged-chr13-74090433-3	3.53769550452141	0	1.38056204581253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148316359-3	11.1514102336211	-0.223921854414084	0.469220719933711	-0.477220729821391	0.633204951182537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18359113496729	3.98511742247933
Merged-chr15-8737507-3	4.65730786812622	0	1.31647588732138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173089644-3	3.93711467721458	0	1.31993189552598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34170992-2	8.49570529195577	0.345484087631614	0.481221515470245	0.717931506645147	0.472799520071888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3852030042378	3.5246784221287
Merged-chr7-88998126-2	4.42502309201732	0	1.33274796622012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110860765-1	6.61804184783383	-1.40271800914837	0.817884838448184	-1.71505564500966	0.0863350253670742	0.555147917113412	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45482342573258	1.29606516661881
Merged-chr1-167220661-3	6.42815951105957	0	1.31289572725787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88514417-4	10.1748369580774	0	1.28793001772015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7052850-8	19.3415005112385	0.457521927475465	0.438141801034224	1.04423254388304	0.296377813564156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69949353403637	4.26069810348264
Merged-chr1-91758863-1	4.46741745780394	0.785749975859604	0.774832937203725	1.01408953870144	0.31054002934547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34281685667302	2.51012229023221
Merged-chr6-34346773-3	4.99675577693605	0	1.32623853871477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107233686-3	4.84401897835474	0	1.30634300579781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113983917-3	4.58026958159945	0	1.34890713197954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67431185-3	5.26949013885314	0	1.32982055000544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111149700-3	3.36435776850946	0	1.36003295390703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144695247-2	6.55125813826268	0	1.32688048405187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101662101-2	5.34629208523831	0	1.32319365145353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53713131-2	5.23288806545769	0	1.30688639272335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108456161-3	5.23900450698118	0	1.33718872865542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83802206-4	6.95279926987245	0	1.30998675917426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112769942-2	8.20522223047607	-0.273047143326385	0.584042938513013	-0.467512104540755	0.640133533876615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.2138726931492	3.93216555221975
Merged-chr11-110373247-2	2.35240617094028	0	1.4286801355974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113381947-4	4.94422077568412	0	1.31186553654218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92106881-4	5.27844294369791	0	1.32302384746959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107044581-3	8.82509822443749	0.539177111065206	0.825398323904311	0.653232621693223	0.513606322551453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27374511348979	1.46894927517136
Merged-chr4-135286986-3	4.85743189444216	0	1.30691968934798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70913585-4	4.85914693231414	0	1.31157742607198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-42984968-2	2.41068242951218	0	1.47351671042878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61080436-2	5.899307947846	-1.57022849335643	0.724704112384481	-2.16671668688334	0.0302564634223041	0.258280713101748	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31197679936648	1.35032549026822
Merged-chr4-119223835-3	11.0914026080584	-1.56852940498404	0.586896804102301	-2.67258126815533	0.00752701400681712	0.0886590471521206	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99742509784696	2.09304857822224
Merged-chr10-14045265-2	3.42909574351601	0	1.32793194200142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17385639-2	3.33775982198814	0	1.33166186035906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155234364-2	11.0942985278838	1.03586337264771	0.496472611952983	2.08644615575654	0.0369382277623748	0.297995732266684	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5209512137771	3.48484411030374
Merged-chr9-46047278-2	1.63018521467758	0	1.78349066471581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71542886-2	2.66954186238812	0	1.41350848304966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4364319-1	2.67779042498827	0	1.35756042782153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148246670-1	1.96349409792514	0	1.42139919625636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134064948-2	9.2269091654958	1.30265530208083	0.529102606034521	2.46200885655029	0.0138161255029836	0.141130984938219	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02344597219821	3.45899559615188
Merged-chr18-31918688-5	14.4094561000709	-0.0328654963493596	0.471352184670455	-0.06972598710312	0.944411757398272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28176167810513	3.18703780952916
Merged-chr11-29801926-3	9.16981858126499	-0.411835629622035	0.755273712766541	-0.545279972890219	0.585560975937249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97113656414069	0.843323834477631
Merged-chr11-11557342-3	4.62223710329751	1.90152021697894	0.862355046569936	2.2050317030582	0.0274518699388751	0.239310284555193	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.875946323586065	2.08628700317133
Merged-chr12-21269882-2	7.2563086154139	-0.284544880391401	0.556606929222727	-0.511213327489029	0.60920168741866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28084217194678	4.02775762676999
Merged-chr5-36998274-3	7.09278015123361	1.66902973928369	0.846907472289639	1.97073445906838	0.0487542568592351	0.364102362139838	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02664576882128	1.74448586799323
Merged-chr10-122954486-2	7.09777365789949	-1.29291025061227	0.760605410765503	-1.69984361445843	0.0891603452592921	0.568472233516802	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54093626229491	1.76901627090616
Merged-chr18-50134870-2	8.99210387917218	3.98398831533458	0.966605176761679	4.12162940062223	3.76202058168043e-05	0.00145721989881737	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	3.18316298393896
Merged-chr8-71627464-4	11.4069053805985	1.42109564748921	0.508653956536715	2.79383582733744	0.00520869145943205	0.067274919584593	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20365161284276	4.58170968551513
Merged-chr17-31065919-3	7.14795626320091	-2.92159641306715	0.748720087107861	-3.90212105080902	9.53534478931581e-05	0.00305140372479251	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4138036655882	1.1517642783294
Merged-chr14-106687615-3	9.3194348476536	0.631961097108481	0.439280855487635	1.43862653974974	0.150256362740937	0.829908907080487	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91916046768488	4.5527192803432
Merged-chr12-104418653-7	20.6450023143002	0.127409002462154	0.45334566558782	0.281041624820548	0.778678473888791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21016311278845	4.23919918438012
Merged-chr9-55307282-2	3.27370268716781	0	1.32847435866882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44962870-2	3.05173273958551	0	1.35604534776797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192727175-2	3.3376550982348	0	1.3300588384584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32721628-2	7.17636304583778	4.8214487001148	1.05235634936079	4.58157420064351	4.61488801682798e-06	0.000272170101396788	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	5.05719577344056
Merged-chr14-121421686-2	3.85864019140953	0	1.31607657025842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33995704-2	8.98133473153126	2.41729507326329	0.826872644336723	2.92341884789565	0.00346210458417712	0.0492920413998491	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5331711325606	3.33788641171686
Merged-chr8-73886187-3	7.39371348059931	-0.893014876708578	0.63370323991107	-1.40920042768583	0.158775911338915	0.863301451734973	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07431744090464	2.30182732386359
Merged-chr4-9133488-3	7.33391855502155	-3.08232117102155	1.02702413604693	-3.00121590412234	0.00268903829296029	0.0408406915820956	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06895848849083	0.469435083901436
Merged-chr15-59906665-1	2.35893019987259	0	1.345820754674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104474635-3	5.8609669263544	0	1.30840766543849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167483289-4	6.18897704037463	0	1.3182116116442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66410215-3	4.50688305070748	0	1.32543157531229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58501216-2	5.01356678574346	0	1.30666299688793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142785517-2	3.20311209019369	0	1.36293139662894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4640978-2	3.27184303735976	0	1.32307184884808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35216251-1	3.99942813569693	-0.323404481279317	0.956928801435356	-0.337960860613896	0.735392682829843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56184394088843	1.04220233489076
Merged-chr18-24145260-4	4.52300775395506	0	1.3539392912615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98747484-3	7.13019908611722	0	1.30225410297177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156316518-3	7.93010807805479	-0.443035858179715	0.659813377378473	-0.671456313813999	0.501929880691405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90821012543474	2.36808708480807
Merged-chr3-116341186-3	3.69704784232537	0	1.31942063885127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127252605-3	5.20322133502191	0	1.32062312762287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117452349-3	4.83348676528839	2.87695402837047	1.15020062796946	2.50126278704037	0.0123751314463411	0.130387832875299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15637648126681
Merged-chr2-5605975-3	9.61035505773899	-1.93172657219321	0.660987715107994	-2.92248483298604	0.00347250533077761	0.0494114140415288	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64025521100485	2.33578942466974
Merged-chr4-88315223-2	5.33592792678843	0	1.31521068767859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53350767-2	3.51224821018779	0	1.38945372584966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140715175-2	4.68866836622107	0	1.33801331298334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156469848-2	4.81299594080505	-3.79926190939727	1.07222296947798	-3.54335060668117	0.000395077079818118	0.00919624238714143	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83458700590903	0.420961122473315
Merged-chr13-111924668-2	4.08973437598893	0	1.30045154704051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96888984-2	8.21311512807474	0.64211672132667	0.470117784571357	1.36586349719175	0.171981811822588	0.914369081230727	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43418999653996	3.99105263958498
Merged-chr5-148503593-2	3.86551928529654	0	1.32413783426061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56608933-3	3.39496983694968	0	1.34025635156034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162149932-2	8.91383397894198	-1.88625366524677	0.705698325633048	-2.67288952904162	0.00752010104707087	0.0886219157839302	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5008629714877	1.31470332505763
Merged-chr18-64599966-2	2.19753976734806	0	1.37372359464755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38470048-4	4.37919395271583	0	1.35411137780281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87451679-1	2.90530204511261	0	1.37707610140947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72096776-1	3.45243277108747	2.72388253287427	1.13127658080249	2.40779538717405	0.0160491730874208	0.157777834296765	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	2.62739267808285
Merged-chr3-84345567-1	1.98715911813859	0	1.42617060253589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22470205-1	1.95992850293629	0	1.39710425401303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29208489-1	2.23084956780659	0	1.43974410257657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43302332-1	1.92610817724032	0	1.46768283147786	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57460236-1	2.42397807881837	0	1.40277277843375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-105629787-3	11.4250129671755	0.525007519037339	0.459696428882383	1.14207439094913	0.253423099211091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88401526071633	3.86849149073607
Merged-chr7-30284952-1	3.78604548516024	2.12989915527218	1.05254278871015	2.02357488751814	0.0430139110685877	0.332952740190468	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22163299749088	2.73313460317399
Merged-chr14-29274099-1	1.38817626662571	-2.22210885750679	1.43788762503455	-1.54539813739158	0.122249990576884	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89613379913425	0.609949614787909
Merged-chr6-39562381-2	4.1781030362366	0	1.36107689621236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87756120-1	4.35722838942691	-1.42179733562361	1.00721466727267	-1.4116130173854	0.158063937377657	0.860378679873419	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7335514935692	0.733321818366247
Merged-chr12-69509301-1	2.39214238479741	0	1.38447121106339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55502596-1	2.63134126931813	0	1.33904832828973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84953031-4	10.6879031984946	0.601780890192189	0.576135060025945	1.04451357319773	0.296247842727539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69597126711305	2.71802922847114
Merged-chr1-86531083-1	2.77181610109171	0	1.3983693739918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13214650-1	3.89068787364559	2.08790768343526	0.800491039887948	2.60828364016108	0.0090997517353596	0.103163146582028	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32461128961612	3.22999918374519
Merged-chr2-4389525-2	5.37379366443383	0	1.30505871717379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102202101-2	4.83790317447464	-2.69865290101297	0.93907081400083	-2.87374802919877	0.00405632436220109	0.0555574453515809	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24439256442857	0.869764003783424
Merged-chr18-5809598-2	2.2373377501262	0	1.45026129003381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157445857-2	5.25711179259159	-0.688471262967784	0.755766439403367	-0.910957707398719	0.362317657907641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54000571454302	2.38772128942027
Merged-chr7-6398721-3	4.39084166509319	0	1.32603873747546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60046759-1	2.22561959702915	0	1.45827284882382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17528053-2	2.82862813154972	0	1.3745421313426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111096004-1	2.08464095552039	0	1.47498513694214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87027209-4	7.11312756396071	0.561692311743091	0.741913001790616	0.757086491795452	0.448998046354273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04606894960241	2.48586599042228
Merged-chr16-44772199-1	1.6812219332327	0	1.49290008613162	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13440644-3	3.68064064908078	0	1.31274466131415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16977784-2	4.40490139876874	0.397163405802109	0.94107562562665	0.422031338382229	0.673002143385895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05851118265646	1.68791476415422
Merged-chr10-48393052-1	3.17636821972099	3.15444199913194	1.26728880654123	2.48912637975652	0.0128057435940747	0.133610748985854	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04563255395932	3.3763371596639
Merged-chr8-77419950-2	3.65377588832759	0	1.30341914146903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78249120-2	3.07423843501595	0	1.35913428640181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72600655-3	6.41091696598913	0	1.33209547157261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91935341-1	2.19390352165606	0	1.40911449833421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94966964-3	5.02988928317382	0	1.31071773488199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72520755-2	4.12501072493678	0	1.32368510090869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34482153-4	7.95995136813031	0	1.30155164398674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23917696-2	6.50864905729362	-1.06281583153366	0.760578307300087	-1.39737857539806	0.162299758323907	0.876426742205934	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67762205300401	1.91157833022862
Merged-chr10-66857453-4	7.0465456558512	0	1.32322692386027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106151419-4	4.4426794179178	0	1.31471529392573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87215284-3	5.22004446475719	0	1.30924117599579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-63130079-2	3.76068177429864	0	1.30885976764896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8708298-2	5.52986061501048	0	1.29846478651945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137080701-2	2.69490015688859	0	1.41532661445418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85076503-3	4.28778959038879	0	1.30298703264564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66848340-2	4.26119920997755	0	1.31446410733839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88318669-3	5.34483370837243	0	1.31506303756524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75886485-4	5.56412716464482	0	1.30139888123068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25381328-4	5.69993203982853	0	1.2974724240523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99133496-2	3.75590324597881	0	1.33591246102074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73010205-6	13.0165201249955	0.699508485952425	0.476982240889672	1.46652941343832	0.142504114108095	0.799082443453289	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87307629936139	3.98416238696089
Merged-chr19-34772977-2	4.0972641378807	0	1.31761349144703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74934289-4	5.63110651466062	0	1.32861525852965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113144617-1	3.09072473237664	0	1.31091313354159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84745723-4	12.1192094174677	-0.230507060337678	0.587075235769684	-0.39263632034397	0.69458810978393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64835548973274	1.80689471818942
Merged-chr16-39098579-1	3.46503535553329	1.23658171411941	1.15348883942907	1.07203613234045	0.283703803369558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.899323202389902	1.84532766974248
Merged-chr14-13354379-1	3.82073550246992	0	1.31962380160938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53320801-2	4.64358085937545	0.234576586340367	1.28967185239455	0.18188858344456	0.855670164140735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.306240821987646
Merged-chr3-81115016-1	5.13994079034297	-2.63723563741185	0.888024339646887	-2.96977855185875	0.00298014492942157	0.0441989447476128	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75839389404432	0.735627456805112
Merged-chr10-80618396-1	2.73973740777164	0	1.34744761304096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137749382-3	3.33402147769157	0	1.3437319951983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45513556-1	2.72983382594752	0	1.35655574492416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52943464-3	4.10399720182421	0	1.32841094079691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135280850-3	3.47638882924988	0	1.33681248900854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53399364-2	4.02917400807995	0	1.31217683563073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86899361-2	4.98145927106474	-1.22390179768865	0.766879712511009	-1.59595015713899	0.110499921909944	0.6687501167109	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99622087565204	1.76550025052025
Merged-chr10-84515650-2	4.03890271450121	0	1.31827522402492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146612373-2	8.59490832034027	0.288859390670423	0.515577159840104	0.560264133422837	0.575299287840895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72298888957501	3.98814616584604
Merged-chr13-62927703-2	7.2854236754295	-0.460958552577625	0.838094003738199	-0.550008173929875	0.582313767191251	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92072689138761	1.41959898789419
Merged-chr8-24541023-4	4.73097634723988	0	1.3232080515753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125524333-1	4.50290286767335	0.301482730219088	0.690014401142412	0.436922373967764	0.662167645190434	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18631838415825	3.70686828879192
Merged-chr6-136717675-7	23.6873341182095	-0.18972329432883	0.444753020363727	-0.426581238669657	0.669684365177014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94472208244679	3.83999648326374
Merged-chr2-165977108-5	13.011562471735	-0.0964969368452557	0.393250768532515	-0.245382703777925	0.806160120084027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92777768568979	3.78754248269248
Merged-chr10-8715862-2	4.25752333349467	0	1.30357477619172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80854897-2	2.40191504147898	0	1.43935907663403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143065370-2	2.72307989926843	0	1.35347142022199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117311677-2	3.54129598599397	0	1.35692643017618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79646495-2	4.84807104050196	0	1.32227672567066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144002831-2	2.47774912258877	0	1.43425109850291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7322507-2	4.1087901300775	0	1.31349009329741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30708377-1	3.51447743787879	0	1.33467703097796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138222318-2	2.88433713269465	0	1.32401094878228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136675567-2	6.61999357561335	0	1.29051532316493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115694199-3	4.68037148174448	0	1.32592914622999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6972376-2	2.55025746051927	-1.16602118349724	1.15335410821775	-1.0109828154157	0.312024654720113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80602209852167	1.19380919831911
Merged-chr10-115248125-2	2.81892948297585	0	1.34118202693949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80504924-2	3.84027595370434	-0.869459378587366	1.19265736403022	-0.729010195895071	0.46599542566729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	0.306240821987646
Merged-chr17-62884394-2	3.33041114246241	0	1.3759197480383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49839142-2	2.73598082262622	0	1.33871144947973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104065152-3	8.7657727390352	-1.39420476184225	0.688835371685824	-2.02400285924653	0.0429698575552479	0.332769413582037	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13801524329146	2.43227213747251
Merged-chr18-55288721-3	7.56482511479572	0.369445714295408	0.675466496816565	0.546948984200674	0.584413781346692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29495674348464	2.24517688100283
Merged-chrX-12002284-1	2.92702191973049	0	1.33345758040129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86372178-3	4.55661208218389	0	1.32311317670711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109456534-2	3.65948624384497	0.973274073584171	0.988568421278468	0.984528791973228	0.324855582072057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830295450235821	1.20275690226768
Merged-chrX-60384300-2	4.0657294638891	0	1.31097656479327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136794373-2	2.61719912502698	0	1.42143042516461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118688442-3	9.11574997915194	0.37915119773899	0.555035774442192	0.683111278944199	0.494536528869604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27455880799059	2.93277238528253
Merged-chr1-184561537-3	3.32599777009351	0	1.32885942258215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118538855-1	5.01048566421299	-1.39768786444374	0.791946652899013	-1.76487628216792	0.077584560633665	0.513817847285646	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81987442045961	1.88086620139027
Merged-chr3-8976318-3	8.07166024291925	0.12696574151406	0.925858539067537	0.137132981072823	0.890925683595502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6111723190356	2.71031093006812
Merged-chr7-111429626-1	3.29517906844896	0	1.36146160347457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-11439206-2	5.78763585625386	-0.933963610231978	1.00425152310379	-0.93000965270675	0.352366086716947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62505055009158	0.73596151290311
Merged-chr19-10295352-2	4.39250642282511	2.49614082533018	1.24303411376473	2.00810323521229	0.0446323225610512	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr3-121847690-2	5.1764301210787	0	1.30858968433364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132765059-1	2.61041817079123	0	1.35172840136501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16264642-3	9.75183846481661	0.822818623282477	0.471314872856476	1.74579388572157	0.0808467738079821	0.529200969774256	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39214488282425	3.92239668056863
Merged-chr1-180874235-3	6.87593373207264	0	1.30713909080697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31413404-3	4.27386818512728	0	1.33889475777255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68796689-4	4.09945541256211	0	1.32659521110862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79139834-3	6.3803355730483	0	1.3239624172277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66165867-4	6.09292826672395	3.09084946140845	1.10931062729633	2.78627950129859	0.00533168776024372	0.0684219301612109	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.08764913775046
Merged-chr7-74981154-2	4.10876950079237	0	1.41505823023437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55825689-2	6.92540833723493	0.164295365676378	0.63936463689638	0.256966613721247	0.797204546226994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79178518722616	3.33971302306348
Merged-chr13-92274014-2	2.98554062405769	0	1.40439644279143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3777468-2	8.21856779045718	0.20144373847076	0.543551851674153	0.370606296069653	0.710930791929579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60464894583225	3.81667693333744
Merged-chr11-115081101-3	4.54109521059568	0	1.34202876750587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34225132-3	9.26564840850209	-0.759892611842948	0.454132250795783	-1.67328484271129	0.0942712348911151	0.593358516200617	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51664205859934	3.75640980479834
Merged-chr7-29037471-2	7.7771167444492	-0.539296535215166	0.632795334853348	-0.852244802563453	0.394078234848841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05439633100618	3.37307834666163
Merged-chr4-26353955-3	6.86124371026742	0	1.30514826976949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86886137-7	17.07328783465	0.263268642897219	0.449195142170201	0.586089692834358	0.557815242384511	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56253702743606	3.52853871537236
Merged-chr11-16669934-3	8.99878323780928	1.88368770013741	0.633212006770322	2.9748136169197	0.00293166612678566	0.0437180864265029	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37872246620895	2.67909089243103
Merged-chr10-118716553-4	5.08947827097425	0	1.33555869814078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65818794-5	9.25916235408195	-1.30760031349017	0.656471334944577	-1.99186201115782	0.046386200105028	0.351030993869503	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47149045331823	1.57664565284388
Merged-chr10-121282636-1	2.31935670289472	-0.437261587348915	1.3517356606415	-0.32348158007565	0.746330555280908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73049043575714	0.961728545204858
Merged-chr12-24803881-1	3.64287231422096	-2.89879078097442	1.2781424710296	-2.26797156551673	0.0233309398107752	0.211454035072803	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39515230645583	0.420961122473315
Merged-chr11-119947036-1	1.83153137682131	0	1.44596729177851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42461220-1	2.37926066734188	0	1.40163572445617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55581075-2	5.52054422613551	3.57341782352867	1.09020877507754	3.2777371685295	0.00104642781452894	0.0197116284528479	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.75485430327507
Merged-chr13-102847780-1	1.27572754731911	0	1.59845210677025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108808201-2	3.17209678714555	0	1.38352425316563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95600019-1	1.53491918349457	0	1.49693514043048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139211069-1	2.84517008532395	-0.412436181955138	1.08843791590172	-0.378924857292806	0.70474366482422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19743074334485	1.97634481356229
Merged-chr3-15231787-1	3.12908993693154	0	1.42191812451877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7880810-1	2.50076443523015	0	1.37069599063424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115178386-1	1.53657114416149	0	1.47827063879769	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67208733-1	2.10449353708998	-0.689584512886295	1.15383333088119	-0.597646552955493	0.55007579486709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02700303158139	1.51144536133504
Merged-chr2-129340420-1	4.65399147128335	-0.673189079741111	0.856826334854025	-0.785677391505245	0.432056511690695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38208515474309	1.1517642783294
Merged-chr17-87739465-1	5.60737754879926	-2.19514160372096	0.801103422535567	-2.74014757891451	0.00614116026151597	0.0762348515290696	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26650010310929	2.18515309243045
Merged-chr16-75831601-1	1.85224850269148	0	1.36756457351295	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40597720-2	4.59315807372642	0.227677417741476	1.05466727259382	0.215876062202567	0.829084356751505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41107502792857	1.95384210223154
Merged-chr19-46518665-1	1.28323287136911	0	1.59309557734727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84211083-1	2.22262606118788	0	1.43063172444048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38120099-2	1.87391620475437	0	1.68092730930731	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16694208-1	3.14577736455112	-2.0442232802999	1.06576516037104	-1.91808041425206	0.0551008155004317	0.398142373673545	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26227159890545	0.609949614787909
Merged-chr18-11355246-1	2.06012165312791	0	1.41814621575251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8011615-1	2.40782338573351	0	1.51893475020275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137854768-3	4.13069474984571	0	1.30984835593572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-46012164-3	4.23633589242495	0	1.31969361039329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13537547-1	1.63403709901807	0	1.60706799768659	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163929737-1	4.3936857756811	2.10011900420112	0.713021706770847	2.94537877915695	0.00322559514251713	0.0468503534525282	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76997388155943	3.61309561208084
Merged-chr5-103722159-1	3.10615501048783	0	1.42480997985912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150097919-1	3.14112674411299	0	1.32452286027656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16318749-1	2.75158686945602	0	1.3740218809519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120783855-1	3.33751207070981	0	1.32156798144728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44605652-1	2.37274649076856	-1.48240759884587	1.16228588477802	-1.27542424653035	0.202159121176935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93087836977973	1.03300427768847
Merged-chr13-20801598-1	3.0559702050363	-1.01275825912193	0.984128063355646	-1.0290919412141	0.303436472715436	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8117629949683	1.34574950999398
Merged-chr11-19026865-1	1.94570536722644	0	1.38567277010258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78452516-3	3.30897446250712	0	1.39426722549521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-38613517-1	1.95416436795874	0	1.40876934217978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94565101-1	1.47407714137342	0	1.61333553383214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34306882-1	1.93212239743374	0	1.55439813927949	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36706204-1	1.69367227114426	0	1.5580053833853	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60610357-1	1.94016547383966	0	1.53630780921916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-54163714-1	1.76013981352517	0	1.48947576151213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-115601311-1	3.54505058801725	1.77750545940605	0.779914683767049	2.27910244082155	0.0226609764661839	0.206643060027806	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10860502747331	3.85199357491107
Merged-chr5-43180236-2	2.83354564129438	-0.43736035021839	1.33457321829384	-0.327715515509539	0.743126771010477	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr4-8906981-1	2.17737515689465	0	1.49772782469514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19176920-1	2.64647847400046	1.57777129671952	1.23814240031862	1.27430519810443	0.202555275021949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	1.46928333126936
Merged-chr3-52630750-1	2.23249882618872	0	1.38131101587107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62439862-1	2.17395936895465	0	1.42911982968521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87486069-6	12.6973492625243	-0.465532155342472	0.488769138296098	-0.95245816248826	0.340864674262656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13737009966025	3.79076160817491
Merged-chr1-43506868-2	4.57559550102379	0	1.33119118482235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69333707-3	5.25659398288129	3.43485276974325	1.09029015278335	3.15040245110403	0.00163045694596618	0.0276665384552339	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr3-84337758-2	3.38894824167943	0	1.32240310456148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132316152-3	5.43210984297418	0	1.29919669503587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80584224-3	6.0689897510447	1.45518370134792	0.834947968432554	1.7428435739292	0.0813609426040953	0.531661215540721	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08776570511608	1.99834080004871
Merged-chr3-65360706-3	4.65699434788938	0	1.32511050606817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99468173-2	4.37112814968897	0	1.33048019041835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11481872-4	5.4731747023823	0	1.31919388198148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40133244-2	3.30847051778831	0	1.33998377978153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156386083-2	6.91398791979192	-2.32456329167486	0.763260116953126	-3.04557154244393	0.00232238519771776	0.0363791049819046	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37165834683037	1.41959898789419
Merged-chr11-11513535-3	4.00947305626014	0	1.32386156314088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28251799-2	4.56764286874621	0	1.32040538624187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-42781639-2	2.99501192963488	0	1.38100981025582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66861905-2	3.88377817147937	0	1.35569570227065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20420071-2	2.70879475545562	0	1.35820865443342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58978107-1	2.56072601751796	-0.824937469410603	1.45894457099916	-0.565434414582071	0.571778322123064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0
Merged-chr10-50740284-2	4.23660609920118	0	1.33067739271239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148579228-1	2.2147216325233	0	1.36709211856129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33539721-1	2.70222310256706	0	1.37723141267027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21949603-1	5.38709657566712	-0.973695694847098	1.07470893456365	-0.906008746677479	0.364931222885993	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03106217799867	1.83409279611901
Merged-chr14-60694859-1	4.76865007228812	0.869805317617027	0.663908216237009	1.31012886472023	0.190152245169969	0.982423198361543	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50429449472418	3.57846697909902
Merged-chr9-66305397-3	3.0972977460918	0	1.33471337955796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109551352-2	8.53089145904896	0.239392396605876	0.668801109670618	0.357942582846156	0.720386282595883	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80044510956314	2.23426860406508
Merged-chr14-65347206-2	8.69698039350813	0.730725623520221	0.643192053285008	1.13609243116134	0.255917882382682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8797213968297	2.73490392254983
Merged-chr13-107027407-2	4.63734019517549	0	1.33153877867681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106232049-2	8.19213980323077	-0.468929126498273	0.638508849899299	-0.734412884914953	0.462697136204765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13291929321318	2.67157150249193
Merged-chr2-128766738-2	11.7328019757985	0.31196115630357	0.479267686116967	0.650912142295849	0.515103202823796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08606200601156	4.38667354628115
Merged-chr4-132380984-4	5.25767883286361	0	1.32075967624277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81750272-3	5.25827126478069	0	1.34380243051203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109368360-4	5.08386873380727	0	1.32413724385675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131056410-3	10.3471278562987	1.37266908339438	0.657981022176095	2.08618339607219	0.0369620136833897	0.298114014583409	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73445913886362	2.82713210315241
Merged-chr7-55910397-6	21.2118652201772	1.3827616082017	0.365158682008614	3.78674169978815	0.000152635621807865	0.00442900858910158	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47469595010667	4.89975360595577
Merged-chr5-99452136-4	6.13465148149675	0	1.3105712290089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25571555-2	3.28094346922976	0	1.3668710821325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22122313-2	4.06238702714405	0	1.31835834294449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136224959-1	2.62176602916793	0	1.47914145751985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21024376-2	3.19010832440852	0	1.33653239969564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25515502-1	4.26252180318625	-0.402381000988912	1.01370329137501	-0.396941594658447	0.691410530451329	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75065438438339	1.40646071772112
Merged-chr2-145823803-1	1.91922472744582	0	1.39616882046707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122765715-2	2.27910547209529	0	1.45527760259822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52179948-1	3.11161600408579	0	1.33533625237326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18619860-3	4.76589728975731	0	1.31010152398355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46523317-4	6.00810548759892	0	1.29617207827314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122368096-2	3.25923130056587	0	1.39011165596657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87125738-3	10.1363422593116	0.342954109867114	0.477693428386823	0.717937676105939	0.472795715874431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37356909969605	3.60233872278206
Merged-chr18-38403552-3	5.62451921930722	0	1.31455835750659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60464126-2	6.72730789403101	0.927517956669693	1.13677322815735	0.815921710412862	0.414544914171809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	0.683637474991079
Merged-chrX-85292299-2	4.2840810451183	-2.90826846319614	0.945030789916308	-3.0774324966213	0.00208792121858941	0.0334598240995293	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99469910140313	0.825079211029734
Merged-chr12-44919829-2	4.38456342630743	0	1.32500251016273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55874080-5	10.5088819345047	0	1.29138325118787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81120899-4	12.5233636037456	1.04884293303165	0.592296335222654	1.7708077370382	0.0765926789001287	0.508899358963682	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74474537337493	3.98076479089294
Merged-chr18-38381414-1	3.19205223642231	0	1.36834311476242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161922150-3	7.77370203426514	-0.212693806555202	0.60401464896479	-0.352133523449694	0.724738128377916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41703553526684	2.70170860213239
Merged-chr12-116462028-4	10.5466026915931	-0.178381282197255	0.577822432773356	-0.308712974920486	0.75753987306467	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63744032558839	3.59917191111941
Merged-chr4-129745985-2	7.7804438771213	0.782170674555076	0.672448341280775	1.16316841984519	0.24476117671069	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94659085618158	2.40940878538626
Merged-chr2-143942803-2	2.22660292883563	0	1.43953180507992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122536136-1	4.75197768943178	1.44383778467709	0.679654180953485	2.12437122457119	0.0336391142211821	0.279347001893171	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93242720192094	3.05424768700037
Merged-chr5-142936474-2	3.92923420862493	0	1.33264029633705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125107468-3	5.67143071921077	0	1.31136411452083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57629446-3	3.89936240548876	0	1.32681624970883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181548428-2	2.92432648606325	0	1.39672281224233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58134020-2	7.12748097728542	1.14741032716427	0.624312744078546	1.83787747094254	0.0660804625632909	0.455399062081924	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85546841862815	2.94005514812924
Merged-chr5-99247629-4	10.0434504428582	0	1.30156174700639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57331461-4	4.5709024240039	0	1.30781634716512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62626625-3	4.7370343596884	0	1.30537061669159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4163117-3	8.40562347849619	-2.61210149130196	1.0530401809861	-2.48053354322709	0.0131185920075022	0.135833863622602	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45596728739737	0.61242769162773
Merged-chr4-53079035-2	4.20941538673858	0	1.36180922659631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117217014-3	4.77370764294515	0	1.31068565882653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-33790264-6	14.060623962083	0.644850487543335	0.387938600497997	1.66224883709829	0.0964628915792428	0.603317774993989	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88693639283223	4.59702873090276
Merged-chr3-123895187-1	1.8678046805725	1.0282823149639	1.95407344693029	0.526225007856924	0.598731880471579	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.954568666865771	1.62042974503458
Merged-chr4-141656923-1	2.67429868785381	0.899909003438917	1.3098319607978	0.687041567447169	0.492056534508065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0929074641484	0.95685815637649
Merged-chr9-100446575-2	4.24030143746229	0	1.31543684630737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159975033-1	1.99828943187103	0	1.38884042138146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14460486-1	2.68946408436575	0	1.39421307281678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28412387-1	2.13216939910271	0	1.36337599307027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54774363-2	4.3689526906024	-0.534220947905018	1.05948922143284	-0.504224995495983	0.614103277523801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03182625049018	0.683637474991079
Merged-chr16-24425995-1	1.91867498833947	0	1.48030597845124	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25102956-1	2.73459439014449	4.58464262928992	1.36201410064521	3.36607574555807	0.0007624576854002	0.0153581811078821	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.18950583898258
Merged-chr15-78536569-1	4.08397457299769	3.28263350114601	1.37523670719497	2.38695890239978	0.0169883902683183	0.165006195914953	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.68282958247602
Merged-chr5-110598911-1	2.34931630913174	2.51305233650789	1.32204940270525	1.90087626934784	0.0573182210667998	0.410467558776011	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chrX-143366511-2	4.0159652543279	-2.52583922146904	0.982585789055117	-2.5706042664203	0.0101521261199723	0.112250564033115	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62338324226804	1.15637648126681
Merged-chr9-45308233-1	1.14319819630134	0	1.65019146050152	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17528489-1	1.9688799531276	0	1.41101065294948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21564957-1	4.1651005369599	3.96706896108984	1.21548220627299	3.26378201228794	0.00109935713941228	0.0204319088828313	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	3.10161003115576
Merged-chr14-49860350-1	2.57346061270404	0.0970331058196394	1.29458148161935	0.0749532626546335	0.940251898232048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.867941679574229	0.581381506691384
Merged-chr9-43246354-1	1.53408176099582	0	1.57714987929377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113042824-1	1.60037012703944	0	1.39654016859025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86676134-1	2.55961419669215	0	1.44260120481961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110862537-1	3.95402374565428	-0.682088478725465	1.01375839270645	-0.672831400097692	0.50105455881116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7229347300477	1.65175977651716
Merged-chr1-36965975-1	1.70733616048159	0	1.64241113495925	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67294664-1	2.95327550392728	0.572808080727295	0.694294402983847	0.825021890232091	0.409359162997246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3262614149394	3.15813062208874
Merged-chr10-111336482-1	2.22799105570033	0	1.37620417458966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105744667-1	2.76224294144162	-0.540223682723936	1.15787743544212	-0.466563788349202	0.640811999884014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52703066336979	0.845523456341755
Merged-chr6-136778209-2	3.32102435601047	-1.5537160585742	1.46914133647716	-1.05756745113431	0.290252688219192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3967026053122	0.581381506691384
Merged-chr1-143998823-3	7.63271428296008	0	1.30769690944159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-123919491-1	5.69768478262361	-1.39996141049349	0.698173334565517	-2.00517742684158	0.0449440823878201	0.343378464598912	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14697844418206	1.84263888870065
Merged-chr14-104849473-3	4.44017820435054	0	1.36200521250829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174932890-1	3.26942423774989	0	1.34709077963376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19953044-1	2.13083595355516	0	1.4648791234376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18615996-1	1.92415170260263	0	1.35943553864156	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60722458-2	6.26112440514021	-3.11368123768304	0.792049205575566	-3.93117146733377	8.45329534894431e-05	0.00276513032100304	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33415114617665	1.08974267817771
Merged-chr16-94250299-3	7.52933179116012	0	1.31054086767319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123977163-1	0.905529239255356	0	1.72810881810614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113777334-2	3.23316865761054	0	1.32603078552025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-3888796-1	3.27557100207868	0	1.38216395499597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46411726-1	2.59516907998974	0	1.39690563172431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108599475-2	5.72810093187636	-1.19089736367591	0.911018466237174	-1.30721539443073	0.191139568640754	0.985809491112762	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95473285095263	0.989878296978726
Merged-chr3-126669011-1	2.92505802187046	2.21322653533827	1.24376294995228	1.77946009359998	0.0751643618440782	0.501858627675808	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.27911570690487
Merged-chr7-122317658-1	3.01953966274991	0	1.36258769230677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90741788-1	3.06753499085925	2.2576870342815	1.14879640355752	1.96526297200273	0.0493838088721505	0.367334590160449	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	1.77796484182175
Merged-chr18-9744627-1	1.00081112282876	0	1.7681928195487	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70729463-1	6.28690263668638	0.98983613596761	0.834220698244151	1.18653989052417	0.235409157899845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52317849806735	3.09570310142766
Merged-chr5-36727220-1	1.88229508268009	0	1.41872705128097	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124707029-2	4.21492426890804	0	1.31563045142732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115359019-4	5.23986093090943	0	1.32054350421521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125542684-6	13.2769992008943	-0.630643921598207	0.518553417727005	-1.21615999439852	0.223923980035787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40671972379951	3.00140563128196
Merged-chr18-69475865-3	6.97499623407468	-0.925644646648428	0.690212979341487	-1.34110002905416	0.179887977884881	0.943794444228457	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33837602561737	2.18911587802649
Merged-chr9-14066925-4	5.07569409073767	0	1.33663228613112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76265179-4	4.77883460404508	0	1.30567317485818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136431521-2	7.53662742576621	0.605849253821532	0.541058063291507	1.11974905269107	0.26282071537183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44292296207742	3.28213118704209
Merged-chr5-136186920-3	3.64059260865366	0	1.33689801363365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34662435-3	3.7799373973513	0	1.34428885178655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60379750-4	6.91329719772812	0	1.29985645332783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99204932-4	10.5253121615379	-2.4139707203689	0.655271252858951	-3.68392587014421	0.000229669059052943	0.00606627095104025	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16411604063793	1.50690972966086
Merged-chr1-185208531-4	7.41666844606683	1.91509028399832	1.27343932120739	1.50387242808127	0.13261421756264	0.760826045728556	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr2-6220342-4	3.88189061040995	0	1.31205717559456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99101186-2	3.27347085696597	0	1.33789825132456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25041398-2	2.68752895798757	0	1.36678885607103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35067983-2	4.29827837384001	0	1.33007467908624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63650308-2	3.6992451356172	1.2985973582163	1.31861865042864	0.984816465165399	0.324714231427952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr9-96536416-4	9.58943398333004	2.10781617756388	0.748156732309343	2.81734573323648	0.00484223701703596	0.0635255611554371	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.797562664687189	2.29879690560729
Merged-chr16-30764364-4	5.2549848221709	0	1.31268556256847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79342895-4	7.46962749227422	0	1.29209339115142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40896778-1	4.22703230683522	0.471756260186371	1.11475025702028	0.423194574045106	0.672153305253584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7039284472137	1.09662457429765
Merged-chr12-26340889-3	6.4699065585351	-1.41772182403052	0.643972801667007	-2.20152438171388	0.0276989225791082	0.240970546068269	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44611234966724	1.87744667331019
Merged-chr12-117427601-3	10.7428487842627	0.247151336941439	0.47795967232548	0.517096632314065	0.605088704386545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75457297915713	3.8217545504316
Merged-chr13-102148264-1	5.12281212166959	-0.304474231512246	0.691526793831637	-0.440292746757077	0.659725093354215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96148955380942	3.05043424441622
Merged-chr4-33076345-3	5.42343511914224	0	1.37619090371255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74402531-2	3.73170628056426	0	1.35871608027569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100169405-2	3.3757093915897	0	1.35048343856579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88727340-4	4.47976811131411	0	1.32610105167779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4630086-3	5.52178270041861	0	1.30392820406378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27397760-2	4.61670052561178	0	1.33858437784643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19583210-3	6.4330575314243	0	1.29992005514572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21325665-2	5.58781639002807	-1.62875517153033	0.770862820938776	-2.11289885474927	0.0346094259232279	0.284798834703344	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7492416265829	2.01628926503709
Merged-chr7-28807780-3	4.69670345893658	0	1.3091397200004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74017971-3	5.42324063014069	0	1.34749577955921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25406209-3	4.89001470256033	0	1.31695596036712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-51987111-3	6.43800885056885	0.506227482685979	1.04128165866896	0.486158071134257	0.626855096647349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	0.666688015277142
Merged-chr2-160374430-1	2.19700505903699	0	1.4427357339399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128456557-2	3.87896320484491	0	1.33985927588322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97754497-4	4.69722220033982	0	1.33088855086098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47313954-2	5.12014611228549	0.616334584111288	0.685101524547696	0.899625182586176	0.368319751106707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79917269340679	3.52488534868087
Merged-chrX-20387181-1	3.00134610625845	0	1.38679049593344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29099176-1	2.03311585239672	0	1.42348302549984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113693659-1	3.0219520012733	0	1.34372743073145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126597788-4	7.26152943186622	-0.919432181418502	0.668968161649275	-1.37440349799568	0.169316450805513	0.903439800549996	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81863701442696	1.65880184244346
Merged-chr7-130770942-2	3.26037721303924	0	1.3371847027497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3348144-4	4.28282601415028	0	1.42352768251269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106957845-1	2.31986788079256	0	1.39322439208567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24057147-1	4.93983109340997	0.705993004313384	0.961052882953578	0.734603700624335	0.462580883591898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52709208985353	2.0411132438942
Merged-chr2-109431042-1	1.49185799514709	0	1.41841318955967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104306953-2	3.16764831443606	0	1.33869399991323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72300818-2	5.8043798023719	-0.245301220961704	0.67473154321822	-0.363553806587592	0.716191226517852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67925950594244	2.17623743947486
Merged-chr3-51652434-4	3.90101639121845	0	1.3304304439388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107519566-2	3.48436996611399	0	1.39761413322805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39909059-1	2.47292501976903	0	1.40913357662235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69689847-2	3.22362425920409	0	1.37340858203588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90964955-4	6.21508455997856	0	1.31132499077516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73451855-3	5.87364792349453	0	1.30455460832354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93815462-5	16.6279496335417	1.13864192448665	0.481409905565092	2.36522329790885	0.0180192027548562	0.172879580563622	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8250205183957	4.786302615205
Merged-chr1-186676274-4	5.00855994569317	0	1.31630485213048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130761131-2	5.03017146249883	0	1.32026816276991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37249782-3	8.15451424480347	0.572920543969258	0.644023707188907	0.88959542571809	0.373683163287777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32240468131133	2.99166718054872
Merged-chr11-20143908-5	11.7906383273523	-0.712083100074811	0.427938514543258	-1.66398460497257	0.0961155059701102	0.601663363648129	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.44789001580319	3.53607108064355
Merged-chr16-91561224-3	4.7754756401028	-0.766346949475098	0.897806518484419	-0.853576949707119	0.393339434693117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51988219047703	1.33924509967612
Merged-chr2-158107455-3	3.96561860654293	0	1.32943593884471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100991633-2	6.92793543946257	0.161297696697152	0.728525482585564	0.221402957827502	0.824778689562701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83372658371267	2.67961625246076
Merged-chrX-102481297-2	4.05054708554287	0	1.35038657633978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38239398-2	3.88071117434202	0	1.35210824335264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75694621-2	3.96087499402066	0	1.36351964382799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21328764-2	5.12198182384388	0	1.35577727530156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32015545-1	3.93680576592426	1.4636729417226	0.903996426757054	1.61911363629312	0.10542281534253	0.646062017384691	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11502330727233	2.08137696679909
Merged-chr9-70791637-3	4.31717003992068	0	1.31454200618423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86677083-3	3.95361426030323	0	1.32135552200263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71636436-3	8.91590847904562	1.20855507043813	0.470369457618233	2.56937403324991	0.0101882424777047	0.112459610295286	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11054634378069	4.18729427996723
Merged-chr10-72620724-1	2.76398974253118	0	1.35124177949627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45919181-1	5.98967610406378	0	1.33925738805997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30777932-3	5.22982441248553	0	1.33611393394997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41514230-1	2.91931086848683	0	1.3716728212092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34065422-5	13.3628448412837	-0.716714389291616	0.415669518734025	-1.72424091012125	0.0846643616044749	0.547065892752498	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.49895748039861	3.6739580453098
Merged-chr12-17257076-5	13.7940411542923	0.563567441747722	0.530949090197812	1.06143404735425	0.288492690707628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27478742169846	4.22224112272346
Merged-chr7-46993265-2	4.51467180435296	0	1.3719980681921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121057006-3	5.00526399280695	0	1.30096816868613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82808181-4	4.34926434186062	0	1.33031981902631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93055751-2	3.28013082673508	0	1.37222964014393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91091628-2	3.08189724575041	0	1.32684841454105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-81261-1	3.02434919425004	0	2.43325242021619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10832145-4	9.17642276391539	0	1.3045927388659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51580499-4	5.42742040840283	-0.424442048545671	1.28684038458115	-0.329832707794464	0.741526371824245	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chrX-112303792-1	2.8237969235617	-3.72168611733203	1.08368019321719	-3.43430298036844	0.000594079763207774	0.0125755543267169	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72551393070004	0.469435083901436
Merged-chr6-134538963-5	12.6479440771546	-0.718836024849458	0.505526833552082	-1.42195424088284	0.155039535340022	0.849292771927996	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58114212996674	2.52853922112505
Merged-chr14-27367688-3	8.76185093573075	-0.490710396495567	0.733828117056708	-0.668699365818449	0.503687272154396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5353480134116	2.0411132438942
Merged-chr9-72468717-3	15.8213385551615	0.24978631568102	0.481060316160081	0.51924115810438	0.603592580846535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97580026524461	4.26808853872428
Merged-chr3-14874625-7	16.5271981006228	1.51492032505941	0.445254220110885	3.40237162644329	0.000668037311027636	0.0137838857361578	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23062134698337	5.21059244966214
Merged-chr3-51859377-3	5.14973589135121	0	1.344914015126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55017734-2	5.56269771676804	-0.74713147220554	0.781736313241461	-0.955733358614963	0.339206964480584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68249230943294	1.47711801254374
Merged-chr17-85023715-2	3.7237847158307	0	1.31806011149312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60910953-2	3.67713312212453	0	1.34080975996154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47644467-2	3.72681077335677	3.03540637283899	1.08357145804952	2.80129782885096	0.00508975214947432	0.0660828420344822	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.72597142609953
Merged-chr13-21172796-2	3.83404691479609	0	1.32638315971976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134700082-2	8.63643493917762	-1.73025276231157	0.597369455786962	-2.89645335152292	0.00377406747611983	0.0526741164661526	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32862150230222	2.30039026721351
Merged-chr2-153156296-4	5.72798755993976	0	1.30817179744548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10249576-2	4.25164943638702	0	1.31313209911652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29557330-4	4.91838932606661	0	1.36521517152127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144580096-3	5.68604457295712	0	1.30880684755232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72253761-3	6.43088987258285	0	1.30821052398187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3562893-4	6.29972952008904	0	1.29009482427569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11098582-4	4.24175125231094	0	1.33006238607209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34294153-4	12.0622187617141	-0.180201527450468	0.574043175798942	-0.313916330770185	0.753584586736207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19768978952333	3.63134540683492
Merged-chr17-80520726-2	2.45340641042562	0	1.39653338327098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38603592-1	1.93127164240512	0	1.45555777604878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100275892-1	1.78137158503385	0	1.54493889741305	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-19973073-1	2.08607645407565	0	1.38973249222355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167641574-3	3.80329191499282	0	1.33278759877495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24550698-5	11.1711194586135	0.895861753080712	0.462532178621962	1.93686362698004	0.0527620156913024	0.385485988077353	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1918083618231	4.1250163203058
Merged-chr10-81140803-2	3.19200138639587	0	1.34282308208432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99682696-1	2.7574311716903	0	1.36865559285086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35824690-4	4.43755830815452	0	1.31923029849672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42464401-1	2.22644803055532	0	1.34616109687927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65104623-1	1.94661945137008	0	1.41030539238379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12318343-1	1.7583196948639	0	1.41136729576192	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121388539-1	6.39210030713096	2.51409921699011	0.883625156899613	2.84521009543386	0.00443821389753234	0.0593329634509305	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38160740951835	4.00246148809999
Merged-chr6-71437120-1	3.12707723446258	0	1.34257813162586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67605086-1	1.97824561162802	-2.18807537721648	1.41004997799753	-1.55177150552057	0.120716906232513	0.713537896504122	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02664576882128	0
Merged-chrX-158234296-1	2.23353464505501	0	1.38329975502394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91185135-1	1.20486478077072	0	1.51498414503453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118622648-1	2.37520378541935	-2.39933496961346	1.3155634986108	-1.82380779958329	0.0681811343296726	0.466334980521958	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53416203091352	0.581381506691384
Merged-chr3-98043154-1	2.18533732310259	0	1.36894413266458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140770629-1	5.88206657483448	0.122825904940902	0.715841416874628	0.171582562905009	0.863765716921372	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55685841070532	1.83880716876101
Merged-chr2-167268960-2	1.6586912602677	0	1.62155790530082	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89043157-3	4.94369532581405	0	1.30846688195038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73593371-4	4.76459850399787	0	1.31763887554142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29441974-3	3.91407342045743	0	1.33549861647197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-71877436-1	7.27797178675963	-0.0540255929200159	0.516541766510668	-0.104590947765886	0.916700397943843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69490937356769	3.68903049000339
Merged-chr1-195169313-1	1.27859309686216	0	1.98537504915929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34557522-1	6.18625322807191	1.94398874398356	0.786499886720089	2.47169615254556	0.0134473756507206	0.138426624018902	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99638348902673	3.1409497388162
Merged-chr5-99204194-1	2.28205549369051	0	1.39606687903956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53380538-1	2.46153730181632	0	1.47510881860428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105562477-1	2.70079243278751	0	1.34782618876998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29237241-1	1.90230207526149	0	1.43330671139164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122233937-1	1.74563815613929	0	1.3674872618813	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129024945-3	5.71087280605389	0	1.3095008993779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122725952-1	4.53562553131653	-1.64941686064509	0.812260138362275	-2.03065099805431	0.0422904104731451	0.328754361501088	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15691949122862	1.1517642783294
Merged-chr14-17933762-1	3.04384232293713	-2.87785244719338	1.24259437683059	-2.31600311481671	0.0205580986224917	0.191338771198596	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46228757235264	0.729295484888209
Merged-chr13-58589648-1	2.73903666186428	0	1.35484550768793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15990641-2	4.9012645549138	-2.82147029774953	1.11116856193365	-2.53919197717368	0.0111108835936736	0.120210966739028	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49069645753944	0.469435083901436
Merged-chr5-89051812-1	1.7583544997413	0	1.43108541045352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72962236-2	4.28407443548109	0	1.33931960181249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21711675-3	6.15031341501182	0	1.31269614499116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98383045-2	3.37729755910211	0	1.33943653947985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52479397-4	7.1609234147137	0.63935240659856	0.897654130492543	0.712248052875051	0.476311185476441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911917615848565	1.84532766974248
Merged-chr15-59685617-2	4.32765256488699	0	1.35837918403295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143998146-2	4.90391437049243	0	1.3432826044664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103616295-2	4.02390281407267	0	1.32085766990599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32328269-1	3.03920293963981	0	1.31947571875103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95881592-2	7.21845152955351	0.99356959152598	0.545448079876076	1.82156584317194	0.0685208875973478	0.46807086775416	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23643510918279	4.22320530864079
Merged-chr11-104003676-3	6.85206040000801	0	1.28750318681776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86205488-4	5.24223041909874	0	1.32756519685294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62844644-3	9.32365076831949	-0.759126776472653	0.618816588586431	-1.22673953878117	0.219920501821397	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71118166397779	2.79716620684881
Merged-chr12-8522927-3	6.27177298157483	0	1.31760585386902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63236025-2	3.5434454200832	0	1.32307581525822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40965025-2	6.60505003339189	-0.00489045242185606	0.913307114180047	-0.00535466366781412	0.995727616947764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18276362202222	1.04220233489076
Merged-chr5-151233718-2	4.86529647760083	0	1.3305799031096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139240494-2	7.00781794598468	-1.36200304078963	0.76007295067993	-1.79193726019488	0.0731430165764806	0.491931202264996	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08585699072376	1.75912454751757
Merged-chr11-20661864-1	6.63406347175926	-1.49046409118429	0.606901449675387	-2.45585851208873	0.0140548481817334	0.1426352087721	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96322469125116	2.04403056204475
Merged-chr16-33668429-2	4.57366833508184	0	1.30742798383551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88514612-4	4.79143997929177	0	1.30379038247982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17686819-1	2.5018952422501	0	1.41656408385425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18431036-1	4.14984193295108	0	1.32679855828608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111662654-3	3.63814902948936	0	1.33930291588518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86415999-2	4.55878635696439	0	1.31921165818098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102849282-2	4.38253638296405	0	1.32607112403907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120664730-3	5.16239677695686	0	1.319443622317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-49140876-5	15.3285479296927	0.374758550415971	0.462731518041157	0.80988334661621	0.418007224019132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16921027468017	4.59642906564162
Merged-chr1-128704998-4	13.2813056440391	1.05205596935412	0.508281956893824	2.06982749453348	0.0384685016606257	0.307305954708465	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46658049276958	4.49655603032405
Merged-chr6-120056348-3	3.82027633504261	0	1.32309088262979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45454317-3	4.0724673293928	0	1.37260010151804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117820317-4	11.9499342311612	0.165423289213177	0.457395238965317	0.361663775922514	0.717603299753292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0093607087368	4.33842363980977
Merged-chr3-97998568-2	4.02523180106943	0	1.33456228298553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11918116-2	7.15923370589921	-0.421326717664006	0.753809781233282	-0.558929756754666	0.576209660264493	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57634251765419	2.31590445616606
Merged-chr1-55398136-2	2.26654206642653	0	1.38347697537376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155256136-2	3.6622108816672	0	1.33218844888531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91482848-2	3.65728967319117	0	1.33284864049343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81850971-2	2.87441135547596	0	1.38694387981959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172003656-1	4.58161566871046	0.334497979567609	0.841412797842276	0.397543251570927	0.690966898520811	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30095298238959	2.54053031365018
Merged-chr3-152404974-1	2.59894546810842	0	1.51309615496034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92225449-2	4.3382364203144	0	1.31609742097444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143919468-2	4.13935682775477	0	1.35553119823937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101561431-1	2.11780019426008	0	1.41890732270212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10990947-2	3.06999763458256	0	1.34139178436292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121996187-1	5.9980416708913	1.48255798601815	0.844831863874993	1.7548556694087	0.0792839985219146	0.521846511625003	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78774172561208	2.72768402745283
Merged-chr2-6642534-1	3.87859528883572	0	1.3978899888386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153969420-2	3.62870311479111	0	1.35318498440669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93257473-4	10.9524757254531	-0.185077677875422	0.564814605133674	-0.327678633295292	0.743154660374466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72780208075293	3.37958553827637
Merged-chr1-172195360-3	7.99602242975437	-2.2487599210879	1.02179793822728	-2.20078729556773	0.0277510853998274	0.241371279986307	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42125301589895	0.581381506691384
Merged-chr3-65938368-3	4.48254985109864	0	1.3190036547772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167230757-4	6.31358007205563	0	1.30632509061915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136511861-3	10.540307642503	0.396521290367031	0.619601167850795	0.639962141682917	0.522197212304424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2262636054113	2.62798987719808
Merged-chr8-112046072-4	12.0406913793787	0.0374922126217559	0.465650405114296	0.0805157951329458	0.935827034319821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0734633904692	3.90183001877929
Merged-chr15-100443427-2	9.31648695141261	-0.393113623905837	0.753956425930362	-0.521400986032774	0.602087464725089	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11712182545532	1.27663763006505
Merged-chr7-30683605-5	11.4776258412605	-1.17556843967075	0.542227859761505	-2.16803400730426	0.0301560991856345	0.257693272836991	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01264314721244	2.71757237205096
Merged-chr8-108809037-2	3.29026750112729	3.07478338233009	1.21760321176722	2.52527535457744	0.0115607667636941	0.123844240154156	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.19380919831911
Merged-chr8-39338101-1	1.67127925628983	2.09008204993165	1.47049777312262	1.42134322685395	0.155217002578768	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.23021119707292
Merged-chr10-68104753-1	3.24783080636732	0	1.31816405886221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50042807-1	3.55469864884419	0	1.32002078505134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86706675-1	5.62358861476532	1.69203956888862	0.872201273221137	1.93996457106709	0.0523839957190655	0.383238309925891	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03252115801386	2.99842317083879
Merged-chr18-53148714-2	10.7134914593423	0.718112457644073	0.720129391796485	0.997199205899122	0.318667826342736	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65424238617525	3.10382477697739
Merged-chr13-44418837-4	5.32118362254998	0	1.30321511095924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121589561-1	8.37544198204231	0.543137555888647	0.483437949989537	1.12348969686886	0.261229573966792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09018312850138	3.64536747098134
Merged-chrX-101636622-3	3.33943015870797	0	1.33617187797538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58861388-1	2.88540645008146	0	1.3563542726657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51521675-4	7.38529008864304	0	1.3101282418974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111024385-2	4.21348774197035	0	1.3151262187606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192745686-8	22.1956993308195	0.542687585509784	0.382212291171883	1.41985906273677	0.155648715979223	0.851273936590081	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91594519929076	4.31837701610968
Merged-chr1-182292253-2	3.58052248089611	0	1.37594217890711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33158456-4	6.68023715727637	0	1.31804257999823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93631517-3	4.68104947358238	0	1.3296484927781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58532410-4	4.70947814489317	0	1.31293286015504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83488706-4	4.61035907582041	0	1.33212951836121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-34982577-1	4.6100368102942	-1.30022245886791	0.742356606469793	-1.75147960903992	0.079863330677265	0.524398684605222	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93166240355465	2.20722616279249
Merged-chr19-21065700-2	9.94884305040049	0.845349519236342	0.575427031596749	1.4690820431056	0.141810537651112	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77085261424317	3.75739287652729
Merged-chr7-17091522-2	3.65418370551052	0	1.36665512044703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154752223-2	3.28294828589482	0	1.3470607201542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-81107604-3	5.56810820762277	0	1.30842978599166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173645522-2	5.79262002341973	-3.6613420720528	0.950545718907739	-3.8518316365256	0.000117237619989712	0.00358997634294645	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27120453173804	0.963545719069792
Merged-chr9-104415021-4	12.6091499575465	-0.626411292994588	0.450959033960039	-1.3890647394151	0.164813064723858	0.885389224551562	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3362108511155	3.4690961160771
Merged-chr2-154593252-3	5.41382264131111	0	1.31323812817395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48355548-2	4.07254267949709	0	1.32259904078804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89165459-2	7.33994136627623	-0.591202917757827	0.503784180592611	-1.17352418065685	0.240585665882719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42198048970474	3.3632336662134
Merged-chr1-80371663-1	2.0421602336273	0	1.36825978716489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56144408-1	1.06537769436676	0	1.80236824373243	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47841361-1	1.71569818207787	0	1.46745093057828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84527636-1	3.70270252312648	-1.03128321066056	1.04335907962588	-0.988425970309614	0.322944073790963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25516932167861	0.735627456805112
Merged-chr13-98957489-1	3.02310429935635	0.84237768006367	1.02635199061164	0.820749302158677	0.411789081695747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46044496340461	1.54028618764495
Merged-chr3-68632765-1	2.08643664775671	0	1.58129312068224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20117888-1	3.73951908444687	0	1.32395044127368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88054445-1	6.94616223220771	-0.200897694264174	0.682971597041481	-0.294152341231215	0.768641496543316	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.214013203791	2.63217254863404
Merged-chr2-5655307-1	1.8494988246586	0	1.4069758423178	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52302746-1	2.46446251830062	0	1.35292470252798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71658643-1	4.7068600683775	1.1956108914319	1.19704685506719	0.998800411505024	0.31789138665625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58813187332791	2.82133949013376
Merged-chr12-34225886-1	2.24084875775224	1.95515200975077	1.40371316035203	1.39284297175104	0.16366728068425	0.881073353885748	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chrX-13616961-1	2.3025700655036	0	1.37486500722225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106355843-2	2.88218445329278	0	1.3264796318011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8994179-1	4.47885671308897	3.13326453039889	0.961013656713567	3.26037461435656	0.00111265150172754	0.0206061334788836	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.872260231715655	3.7338319598883
Merged-chr3-86962055-1	2.79316457644873	-1.56171821227091	0.960997758234509	-1.62510078602057	0.104141085452782	0.640730945296815	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18516602216621	1.20440436174322
Merged-chr4-149679505-1	3.70811489169422	-0.367944938765612	1.00862822675221	-0.364797384215984	0.715262657836805	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4654047763894	2.18069501644732
Merged-chr9-122285463-1	2.72920356759587	0	1.37449325485076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45867184-1	2.48139419327945	0	1.38987589390788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29228287-3	4.82494140116365	0	1.3079285946329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67431594-1	4.40910380423002	0	1.30823340989626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152583846-1	1.97301026936695	0	1.624435670304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97567956-1	2.03341445163655	0	1.38578318941887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106433145-1	2.81687490776172	0	1.34280306444063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37307408-1	1.81972765049619	0	1.4604896870531	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91086384-1	2.66545640065834	0	1.3487452971195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-87077969-4	8.06144486405779	0	1.29666255636038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45020080-1	2.51983415488627	0	1.43366629462297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11778002-1	3.16681551030687	-2.76676575446563	1.20687849156989	-2.29249735892357	0.0218769597758767	0.201036677473553	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60702566326337	0
Merged-chr3-88745630-1	3.73534815142066	0.319925544846181	0.926111049999611	0.345450521129529	0.729755701681218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39656755923773	2.18911587802649
Merged-chr1-171037081-1	3.18389010484252	0	1.32300656063658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22008496-1	1.60078518979335	0	1.40487673427045	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130613813-2	2.75749148234407	0	1.33925317878827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90487360-1	1.84570051592988	0	1.45662852018757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59372931-2	2.89113167959503	0	1.3454368963475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23967881-1	4.13525013632105	4.06303655767	1.03542989618451	3.92400931501206	8.70873657403121e-05	0.00283689481638407	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.9001726754443
Merged-chr17-10823187-1	2.12438772408229	0	1.45327053872188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20964402-1	2.06496425986898	0	1.58850162786731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67879509-4	6.5179708981311	0	1.31972391920287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-71876284-1	2.44968153361892	0	1.41040434260753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21403623-1	4.70021723206854	0	1.30435934415305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38949452-1	3.09715902790328	0	1.36163400607868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47441705-1	1.36911820267955	-1.40993005655599	1.71055534656666	-0.824252813208254	0.409795924106148	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.964915449582866	0.306240821987646
Merged-chr13-95794525-1	2.20491801640893	1.27222652704079	1.4109031981912	0.901710711742522	0.367210561291423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr2-84608010-3	5.25787621542016	-3.55597767155804	1.10895649781464	-3.20659798519202	0.00134314553803899	0.0238114998178774	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9824968137099	0.382164212378408
Merged-chr13-97544472-4	5.3995441585423	0	1.30314142872545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61954930-4	6.31868890109922	0	1.3033066553127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144231577-3	3.8780939897756	0	1.35179690556972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28568428-4	4.68668445857201	0	1.30715715344987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140489752-2	3.68624512366431	0	1.341533924094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37622134-3	4.07843000498504	0	1.32561891244365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59621786-1	5.01152154351546	-1.73499998910178	1.19348129228211	-1.45373036035127	0.146021077417448	0.813044761837132	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.914032537518954	0
Merged-chr12-8635787-2	3.84648605187364	0	1.31647501496178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102669077-1	3.40914347292361	0	1.32958214250401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97000598-2	7.16376321908365	-0.547519954947068	0.594871423815392	-0.920400498372201	0.357363508310188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97373935764629	3.17652693925773
Merged-chr17-87181869-3	6.4998336285379	0.925829047220228	0.708903707506085	1.3060011358627	0.191552171301341	0.987393539099852	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64965974739183	2.51392635472486
Merged-chr18-5124854-3	4.9064460746752	0	1.3283328145147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14269376-2	3.69002738596871	0	1.35312172643479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100639969-2	3.53467385835662	0	1.34387004332119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51553976-3	4.58733201292676	0	1.32616090556049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106702753-4	4.30453736974661	0	1.32873304271285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114680927-2	4.12119499924434	0	1.30884607447478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31067615-2	8.87903765788616	0.0834027410701146	0.492780139284865	0.169249396274677	0.865600477572718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71603566269113	3.85683608756509
Merged-chr9-37086341-2	3.89586089284587	-1.96609281130052	1.11932230635159	-1.75650284117804	0.079002586722185	0.52067604961653	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03079958924498	0.609949614787909
Merged-chr9-45122470-4	12.8264330811624	-0.341710299779571	0.506282196153121	-0.674940383793832	0.499713641930383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26062808715592	2.9185122841552
Merged-chr2-145827363-2	5.27167917616028	0	1.33082677327043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31110099-2	5.21838255680209	0	1.30306021606875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83689580-3	2.89294504030328	0	1.36785937737624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102507026-3	3.99346812637569	1.86585135673506	1.21359472879688	1.53745835612256	0.124181105407486	0.726866581329053	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.581381506691384
Merged-chr10-22334172-3	7.84873325203926	-0.0274161833946349	0.515661184005187	-0.0531670489170639	0.957598809621503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71549029165359	3.62460369158793
Merged-chr14-60916875-1	3.29012789280819	0	1.34550755766779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59975451-1	2.67223529851041	0.929767836822569	1.07708308146028	0.863227593884417	0.38801234501028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648566509472229	1.14490468848716
Merged-chr3-37754353-1	3.26467235525178	0	1.32708716111951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76522231-4	5.3689475346435	0	1.3109622357777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47175783-2	5.90599249720175	0.911505982271973	1.01195836775308	0.90073466588932	0.367729412440408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	1.04220233489076
Merged-chr11-78600691-2	4.02338826577801	0	1.33406559979881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123242466-4	4.58971538159967	0	1.30558054426346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43554524-2	3.83722778635104	0	1.35622329124746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45032763-2	3.97179409516548	0	1.31001591047286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94236263-6	9.7348636674	1.13409459552623	0.497238253759858	2.28078710145648	0.0225610480108795	0.206076914078687	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27935096539875	3.69454115686804
Merged-chr17-45807652-4	12.7450501829076	0.53740918377836	0.557271867867647	0.964357281903913	0.334866831383138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44863047046458	2.81158044232668
Merged-chr16-93815981-3	14.642318403071	1.10391995230177	0.459462052129879	2.40263575018752	0.0162773918134492	0.15954138974676	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29374691597931	3.78315460108097
Merged-chr1-153543709-3	4.43652802610249	0	1.30865815972574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91778150-2	3.60313889193792	0	1.35204233893914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167313933-2	2.85546014212785	0	1.45077407922167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64638639-2	2.92565960338347	0	1.40368020087125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74939546-3	4.08062936448909	0	1.32164070938391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148959199-2	3.03642430188023	0	1.36368463818111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58238054-1	1.83003116510321	0	1.37814440319646	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79487514-1	1.92112976042849	0	1.38486824279898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128902590-2	2.60782907346865	0	1.41557042310754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114957176-2	3.26836217297491	0	1.32651101775773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38922475-1	1.66233260061682	2.25776622634763	1.29253991407676	1.74676712243762	0.0806777417707947	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.31470332505763
Merged-chr4-72232389-2	2.48440059095931	0	1.43823631947514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86632639-5	13.3130383570684	1.39161375956988	0.50337040047002	2.76459195509005	0.00569940406609314	0.0718983123750815	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42621301852079	3.67526486527475
Merged-chr15-76794985-3	5.30896699353342	0	1.32019310244821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66768798-3	4.12992407862548	0	1.30651665080181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123024460-3	4.58588780862973	0	1.30428947048014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91180074-2	4.84448207208902	0	1.36194917919896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88246937-3	5.7279450631641	0	1.30648392757982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95960804-8	21.7834990510372	0.953994089375597	0.390761866835179	2.44136946397071	0.0146316769466295	0.146982561376549	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52976332309461	4.73917687772666
Merged-chr12-8348235-2	5.87374114974324	1.58004195812777	0.738555629565884	2.13936756403374	0.032405911724075	0.27193999069236	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92961049911315	3.26702399068743
Merged-chr9-118631756-2	3.40388985803091	0	1.3787636697845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9455398-3	3.23355445978147	0	1.3478251496449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81022219-1	2.5704089042295	0	1.38487471831279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133550009-1	2.14697624186664	0	1.34782401040876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44698148-3	4.3926426961786	0	1.31240853487215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31077018-1	2.35091053716816	-0.836687130345575	1.41961113249104	-0.589377690267482	0.555607938954898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0
Merged-chr11-68904996-4	15.687769007391	-0.018429667126283	0.409140879803854	-0.0450447951696205	0.964071603787309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26210242873121	4.13975214565339
Merged-chr2-58797086-3	3.86173358715858	0	1.31539605730672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34465649-4	4.17958771116247	0	1.33540193119132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51899302-1	2.97004204042896	0	1.32443852840538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131085394-4	5.62067345681437	0	1.30800186002841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70929095-2	4.59154899611454	-1.12158426285954	0.721659658286748	-1.55417342507718	0.120143054670777	0.711307808109373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38959066601344	2.09145770840793
Merged-chr6-83415718-2	5.22988486888159	1.37895355858601	0.814531768655871	1.69294017943774	0.0904668543432184	0.575062943960306	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37038189445179	2.543490698388
Merged-chr1-172644577-2	5.08943582197393	-2.2827755075876	0.917511435796886	-2.48800768963162	0.0128460955441912	0.133944485654649	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54331100573972	1.15307255889252
Merged-chr6-51550173-3	4.18838374660503	0	1.35132413371123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24965376-3	3.1750651337484	0	1.33740032682804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63138917-2	3.80044055196792	0	1.31565842189393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135154613-2	3.88655371879324	0	1.31773027752119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27438937-2	7.5927958311947	1.19102816136497	0.692171879012189	1.72071157104028	0.0853031756297339	0.549834416522055	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10983156003597	4.34715788258956
Merged-chr2-118263980-2	3.79754901333565	0	1.32483002185182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11089212-4	6.36228772660697	-2.73577137923505	0.883889801966379	-3.09514984011447	0.00196713492007611	0.0320298265881776	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32082617443572	0.581381506691384
Merged-chr1-191391515-3	3.96290399816668	0	1.3115101452717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93129659-2	4.68452187702655	-0.0856589319459468	1.08644224368899	-0.0788435210831765	0.937157086951594	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.894926441414501	0.666688015277142
Merged-chr1-131679189-4	14.5844245106679	0.952689797049924	0.503320266185475	1.89281032585891	0.0583830978889863	0.41590558319565	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54604411725825	4.39366797374709
Merged-chr3-60320382-3	3.24154039409513	0	1.36556273329666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25569903-1	1.92379572922142	0	1.41358167481801	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24470808-3	3.77202288607531	0	1.33462757505342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84111002-1	2.64434715530137	0	1.37238993563998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-19909-1	1.01734601495097	0	2.28396264578977	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-108259500-1	2.55517001729922	0	1.36325497041286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98402782-1	1.5900785652037	0	1.47704992225106	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68146975-2	2.56105570928718	0	1.44356719592677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83509737-1	1.9887458635054	0	1.41962093843782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12440315-2	2.92686466547586	0	1.38011769471843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108762189-1	4.49716347027352	1.1860073532308	0.997476742991628	1.18900752480076	0.234436705868504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56625215524464	3.22029751155607
Merged-chr1-186451830-1	2.08393822262793	-2.47723055171025	1.15806407965148	-2.13911353891209	0.03242647417732	0.272042673204668	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85696379183835	0.581381506691384
Merged-chr13-35074204-1	4.45287766806509	0	1.31628336253457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17925317-1	1.82796463833767	0	1.48384485880879	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4707502-1	2.03704105169094	0	1.49543049094134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9892762-1	10.0438945525542	0.133365632636065	0.460892591983811	0.289363801796037	0.77230299263626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53821467762503	3.72064744019697
Merged-chr5-45402786-1	1.75058098595729	0	1.45439297925504	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36123686-1	4.36616315636431	0.00503704741016721	1.00379663721468	0.00501799590018944	0.995996235347728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00888360579136	2.00775690860912
Merged-chr11-97623422-1	4.63539076511393	-1.41470561565643	1.01412231795239	-1.39500491273366	0.163014358110054	0.878833119797013	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58469776766787	1.20539659680455
Merged-chr6-8546437-1	3.51241498778616	0	1.32901947613611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5131424-1	3.3214689686299	1.66011275286129	0.864472256863462	1.92037713145894	0.0548102799989984	0.396198291683025	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14855119822055	2.29666818073796
Merged-chr1-172594673-1	4.04486576045733	0.501001576944028	0.97661211472664	0.512999551602185	0.607951634351129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04753202573305	1.72583980988184
Merged-chr7-24978933-4	6.13560553844651	0	1.30159981056666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-110728017-1	2.84483159890778	0	1.34827493113026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148252897-1	1.71300587718635	0	1.51727709333581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149645657-1	4.23330779460985	0.0983883724278152	0.833167469573029	0.118089551045765	0.905996702578516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22068835601633	2.77266404657277
Merged-chr9-98973319-1	3.04343030863725	0	1.36457065185247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53266472-1	2.64902965332784	-0.215163433783885	0.920338868903894	-0.233787185409371	0.81515019848806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90692616939558	2.34757907598192
Merged-chr17-72833482-1	3.206048634783	-0.342014271611767	1.21917282193315	-0.280529770233445	0.779071088661282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	0.469435083901436
Merged-chr19-40626602-2	2.53936030474877	0	1.40732057981227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84829584-2	3.68866872113044	0	1.31478483485687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105059823-1	3.02543461426598	0	1.33068993729576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62757075-1	3.4992148748747	0	1.36794319319263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-76068117-1	2.51593048870564	0	1.37994536715198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40723021-1	2.25540562259019	0.049370350853551	1.31302392064115	0.0376004961352443	0.970006212344349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789939949474495	0.61242769162773
Merged-chr8-94371579-2	2.67115682859838	0	1.3350488644106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35235600-1	2.29575599795613	0	1.3799842245835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35752053-3	4.29618756890176	1.94855126312117	1.20636484764618	1.61522549908771	0.106261870472856	0.650045701920917	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.73596151290311
Merged-chr16-22358644-1	2.80366153742102	0	1.39948187984907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55723424-1	1.19866456556561	0	2.08044573735827	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4364181-1	2.73860854167545	-1.42886298970567	1.4847131463525	-0.962383200563668	0.335857149230729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0
Merged-chr5-64630986-1	2.40447634037157	0.609060889915987	1.26200991550841	0.482611810280923	0.629371391765586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16898246780413	0.905469781553611
Merged-chr2-28924122-2	3.03728013550472	0	1.33656116706299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139505300-4	8.62434890901544	1.37684155585795	0.69783969380959	1.97300550265579	0.0484949354143012	0.362953848308662	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71680086801487	3.11413112565287
Merged-chr14-105483147-3	10.3847918223253	1.62665711684935	0.541706716880214	3.00283726629338	0.00267475415572876	0.0406828141631761	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14272075008035	4.09635151280813
Merged-chr3-14881146-4	12.5700909407978	-1.50634458087436	0.593416183129676	-2.53842854930227	0.0111351537789203	0.120330371893059	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12022526815837	2.73301515794639
Merged-chr7-39553298-3	10.9607605999566	-0.48736511003391	0.496009335697819	-0.982572453698381	0.325817907336364	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18081072562077	3.04381056405952
Merged-chr19-45030779-5	14.3936760485572	-0.975570723782411	0.525989032302085	-1.85473586685382	0.0636339542724622	0.443118539630042	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9063441695994	2.09296523225154
Merged-chr18-76380259-2	7.13498334197778	-0.293362082344441	0.616405458438326	-0.475923887967636	0.634128603069492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70170691024296	2.43067782037622
Merged-chr2-138311104-2	4.26874868403256	0	1.32845147007092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138013902-3	8.44036413294976	0.0209519360676914	0.622250746040898	0.0336712108438586	0.973139336368226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95406373985644	3.90080629403792
Merged-chr10-14020437-3	5.88526081350744	0.0284534964461736	0.705164254601219	0.0403501684331185	0.96781395769451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7015680181857	1.84231959469675
Merged-chr17-56337459-4	5.21369043072749	0	1.31505610555924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131552742-1	4.1973333511189	0	1.31039038201895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48410418-3	9.11633060015467	-1.37786479694401	0.699331027430338	-1.97026121092742	0.0488084415102774	0.364420349410899	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.352757570456	1.50921536809972
Merged-chr7-80640737-2	3.57313768859283	0	1.35800078098156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94569102-2	4.08439777824881	0	1.34636255573048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144004368-2	3.24521481578214	0	1.33573465880817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3382476-2	4.39732991368402	0	1.33047167242236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130890292-2	5.21911895265774	0	1.37959055108293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94909083-3	5.17499792506563	0	1.30859888681838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73389289-3	4.20833499539405	0	1.3168045699075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137821285-3	5.28764089003884	-1.27909609573085	0.981050461625749	-1.30380255222672	0.192300912210346	0.990314083796775	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84353224808858	0.733321818366247
Merged-chr18-88772959-1	2.58929577669049	0	1.34200844543685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63413682-3	4.55497102218336	0	1.31853059837719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117404085-1	2.21067542966112	0	1.3693302821072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30408585-1	2.64532344539153	0	1.36218802610894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96206905-2	3.07105096475618	0	1.36117992878614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31224709-2	4.47575008117819	0	1.33898602021202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86885119-2	4.31593178726147	0	1.32963291129553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-24395004-2	4.18971876484916	0	1.31158218481427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135516490-3	5.60332168542131	0	1.31715055793205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-175620008-2	3.55445763191016	0	1.30805088607126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35894486-3	10.1246501205975	0.306283956703871	0.583558803055554	0.524855344654467	0.599683754309983	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75378673457591	2.56956507902297
Merged-chr8-123924894-5	11.1725971411582	-1.87199142317972	0.594623803388114	-3.14819456017953	0.0016428230962739	0.0278330096056816	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78895649709862	2.37544986530815
Merged-chr17-13850382-2	3.11977362627486	0	1.33144296342783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69509784-6	15.789375985064	1.1217167881726	0.439673333066048	2.55125044848717	0.0107337162274247	0.117135173780443	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72694578287032	4.84395133830581
Merged-chr1-106231992-3	4.2418039580614	0	1.30765970205534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106734033-2	4.63948399348491	0	1.31006482866372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155895401-1	3.45984323485597	2.02545765169203	1.03286773798134	1.96100388966609	0.0498785691573207	0.370172059074875	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702988096853987	2.84681464190051
Merged-chr1-95366424-2	2.24334360302517	0	1.38798920432585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-20940451-2	6.79513835284189	-2.56067784670964	0.86334032786068	-2.96601208593474	0.0030168863362672	0.044521557030198	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40215619857993	0.666688015277142
Merged-chr15-55276214-2	2.05634113024152	0	1.4009745420665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81129045-3	3.70380457713308	0	1.31678196551395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31373014-2	3.08055448330574	0	1.36690356577355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61660973-2	3.77445242421712	0	1.32151756499184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117964886-2	2.64872489590161	0	1.41654500400358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77460724-1	3.97486288423215	0	1.36230953096756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51289305-1	2.22282068174037	0	1.37365328906189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4536128-2	3.44129558835328	0	1.32324186842174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110211489-2	3.06893958483391	0	1.32481967111408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61412789-2	4.13576023298571	0	1.30535244580097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124897445-2	4.76549311096811	0	1.31939395470722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34637082-3	4.98576002317911	0	1.30203782873991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72991649-2	3.84990586560451	0	1.35443751391203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96886458-5	14.6110065638749	1.58978157220546	0.55996875251026	2.83905408128345	0.0045247487466628	0.0602187844398018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27586890115267	4.71851383560038
Merged-chr2-129384135-6	12.7172330815151	1.57591669916748	0.503582630323618	3.12941035745165	0.00175157507463364	0.0292732544314603	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84523318375696	3.96923246971509
Merged-chr4-3720546-3	9.83678875746655	0.0384848446142098	0.534807382288727	0.0719601970517172	0.942633583845472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71295423760591	3.10553501069898
Merged-chr19-11404634-4	4.48345934138239	0	1.3235089247063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128334595-3	8.34073754989148	-1.08238240644912	0.599814523715779	-1.80452850615201	0.0711484945053285	0.481589964982929	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67780211723057	2.71584972307826
Merged-chr9-100455232-3	11.501141919819	-0.288290980545832	0.452956696246098	-0.636464772317218	0.524473534829139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28012322419946	4.02858678969315
Merged-chr8-128709439-2	3.63325972304589	0	1.31032898756277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72369504-4	5.17887773466377	0	1.31585292637251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146685075-1	2.29126416269931	0	1.35259675392224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109239026-1	5.60107057889718	2.04740645834713	0.744131939418281	2.75140247299111	0.00593406865128389	0.0742139043228319	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.904784780172115	3.14242356165217
Merged-chr4-119958966-1	6.03926616111245	-0.580508221259604	0.637648643092904	-0.910388859990132	0.36261747060984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74036554086017	2.00554713990774
Merged-chr15-30610485-1	7.91480308768358	-0.445632758212161	0.665154273861266	-0.669969021810884	0.502877538194263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16668288611541	2.30728238953869
Merged-chr12-108206864-1	3.51026514165732	0	1.33241153369206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100079913-1	2.56197277238567	0	1.3896365271222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156956373-3	10.7932633850959	0.00423498305574983	0.501928855002347	0.00843741700351145	0.993267995115182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74806195490787	3.54054682698176
Merged-chr1-45872375-2	4.25207146145619	0	1.32558419559457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22808449-2	3.55823939430999	0	1.34263438341752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19803168-2	4.07338783756824	0	1.32212330002073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19567056-3	4.58453306477107	-1.379854129859	0.847249500304943	-1.62862784736062	0.103391825439821	0.637260613824509	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42369799441226	1.29684500016202
Merged-chr6-87804920-3	4.49669515646803	0	1.31964173532188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84595955-2	7.65753422796479	-0.369997514117044	0.770300495827821	-0.480328801709282	0.630993612079205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59840472687264	1.94985701881947
Merged-chr19-3719178-4	4.68594424003496	0	1.31099912316467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4194832-3	4.97982861358363	0	1.32335548920883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76052175-2	4.54849027969254	0	1.32176347146636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137895393-2	8.30637462151297	0.0704630942519678	0.516682178889796	0.136376087914186	0.891523976133429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41328768537583	3.38864452260762
Merged-chr5-125271705-4	4.11245227240151	0	1.32199478676062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67419606-4	11.0115120645461	-0.755577558835622	0.4602117971335	-1.64180397708588	0.100630634588285	0.623713311942147	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84259963186212	4.0971666157811
Merged-chr1-162838074-3	8.00053015310538	0.838398080809932	0.659314329728592	1.27162120252272	0.203507739707562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63265765814514	4.6442136112044
Merged-chr2-25551326-3	4.10903678319349	0	1.35421969101615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65891315-2	10.1608078066897	0.63041093014814	0.532840276818067	1.18311426064248	0.236763866813189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80413917994035	3.16787712908294
Merged-chr2-34776064-2	8.05098831882473	0	1.29698821370002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14002968-2	3.01953625203743	0	1.34354122104616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45337124-2	3.76273237673853	0	1.33323897849908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53006291-2	2.91323685670357	0	1.34968658862937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38120728-4	5.20252795130427	0	1.30015514882139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102506795-4	5.20136876174139	0	1.29846913396455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62091805-1	2.61285315953481	-1.14589677341207	1.15205111404927	-0.994657927445978	0.31990266346012	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29307377860815	0.469435083901436
Merged-chr11-115640591-1	1.82617248749084	0	1.41226275617447	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85342121-1	2.82692433941045	0.0401137725180258	0.887319925938205	0.045207789598111	0.963941685398582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22248286534234	2.03247245696714
Merged-chr2-27595443-2	3.19249775775269	0	1.34933787281343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19095524-1	2.84737677686831	0	1.54037952521531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32958248-1	2.15158999751517	-0.521825910713373	1.32667605938661	-0.393333328826812	0.69407330504799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45537753967067	0.926147595614233
Merged-chr3-101616027-3	6.36981325832033	-1.53202602413343	1.03119443170781	-1.48568104813772	0.137363505842359	0.779112546894785	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94272951816172	0.581381506691384
Merged-chr16-24902590-3	5.32027180593918	0	1.36565639592978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47945543-1	2.97592361627293	0	1.33833659913392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80603147-1	1.78092904794208	0	1.46791472891858	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76758561-1	1.89740487596347	1.27440546505016	1.40138122108708	0.90939242361302	0.363143019615612	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr4-133076837-1	4.08876741982945	0.652289818365603	1.10577798223071	0.589892210595227	0.555262916667197	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15388000553838	2.99007277129357
Merged-chr13-10686525-1	2.67475308821313	0	1.40383823612226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56763883-1	2.55984810048678	0	1.34518848794551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47113139-1	3.09762605435654	-0.587093727696663	1.66428411819303	-0.352760518038285	0.724267985289526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28358324298938	1.69736543272236
Merged-chr18-68813290-1	1.39099384961135	2.01791200279248	1.78986302755915	1.12741141177955	0.259568576378839	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr1-173955614-1	1.58330240858851	-3.72724090502161	1.28484893201849	-2.90091761929252	0.003720716807566	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39923921805937	0
Merged-chr1-53890525-2	5.76713888636897	0.929563420109427	0.661682885452962	1.4048473075937	0.160066688115318	0.868386700006939	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54199982274797	2.51756482421134
Merged-chr5-122903521-1	1.81169496173297	0	1.44965516685353	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39091551-1	2.23877915142076	0	1.50010883226429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73370602-1	3.19559578926817	0.0562057084019016	1.15226780016522	0.0487783381552817	0.961095945268945	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994475741705525	0.733321818366247
Merged-chr17-64232548-2	5.8845738071883	0	1.30888896087856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120434345-3	4.13711181686132	0	1.33423097131483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99674989-1	2.80556722845702	0	1.39018095112604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-44981616-1	2.90218894104838	0	1.40461047632148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52095894-2	2.1495093323713	0	1.47032028817706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105914265-1	1.20560025433364	0	1.56130709760746	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129306684-3	5.1148319996949	0	1.31879115663865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118011034-4	7.96724666190498	-1.93374381916141	0.876137348543845	-2.20712405694761	0.0273053935099988	0.238415051350131	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5680712585276	0.683637474991079
Merged-chr11-4080403-4	5.41631034899546	0	1.29284526427661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107675879-4	12.8743915929759	-1.02754391170246	0.527492244670969	-1.94797918279047	0.051417454083784	0.378327322886944	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68884925793644	2.97849869936908
Merged-chr10-62411149-3	4.0869013484939	0	1.3286905384079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54910047-3	5.45406519853615	0	1.31783926557621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66907690-3	5.49648592299751	0	1.31187616057933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-42954575-2	4.23424013621928	0	1.3394447257148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75143374-3	3.9005351359184	0	1.32282954684708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20112770-3	6.82614595257941	-0.0675876322093237	0.923964588528399	-0.0731495914978417	0.941687079018768	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17907729735458	0.825079211029734
Merged-chr13-44228772-1	6.84497020528924	-0.881314127578589	0.71076605504632	-1.23994965899315	0.214994014588187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6871142783879	1.92027594280124
Merged-chr7-135522285-2	4.37232908764631	0	1.31753896799163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101213983-4	10.5673305422008	-0.908640998518456	0.645270621071912	-1.40815491802344	0.159085202177649	0.864209961052511	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23778245769493	1.53857528724196
Merged-chr11-72866688-3	3.37346499620939	0	1.36896920188247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92692359-4	5.14737262834966	0	1.30440944997534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-39831393-2	3.46119444472483	0	1.33272622488524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33035945-1	2.49495688767595	0	1.32299189513572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135899262-2	4.08053488735661	0	1.31999453103772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-104280096-2	4.02862183416949	0	1.35828404862998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29470140-3	3.99031914357345	0	1.34189457646842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24948594-1	6.63173483824456	-0.119639440762881	0.931518027800493	-0.12843491719143	0.897804800044211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51586652049748	1.94916330874209
Merged-chr1-64053794-1	2.98638158207943	0	1.3803806251367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21502509-1	5.33285822647232	2.05742106219444	0.874181970824331	2.35353865769428	0.0185956741860051	0.177202837962383	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857370518835178	2.36173837884825
Merged-chr10-96171774-1	2.50813394279891	0	1.34097784040666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73755320-3	3.60196596036716	0	1.34083758497953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149338941-4	6.76280550714797	-2.88059555409706	0.805937451248412	-3.57421726665633	0.000351277158675311	0.00842060059090128	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87786565836369	0.989878296978726
Merged-chr3-51701529-3	5.43011928919518	0	1.29668424711502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180390594-4	5.20211934859154	0	1.32159988951303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143061184-3	3.8762438875342	0	1.33660431222919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80313762-3	6.62179244240074	0	1.29692150961715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48844347-3	4.54480908432799	0	1.34717572518508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140465763-2	2.78838213336612	0	1.39977882234132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87362354-2	8.8167291216989	0.274689193894599	0.636671046144604	0.431446027831788	0.666144088536934	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52670662871991	2.03916911456376
Merged-chr13-34864601-3	3.11012753373294	0	1.40536405995858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117842162-1	5.64474463268864	0.169629099928645	1.07290581804593	0.158102507298905	0.874376024923812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	0.581381506691384
Merged-chr13-100156859-2	2.39227957510173	0	1.51511341022657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34016042-4	5.50221902304076	0	1.30117112628538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91019979-4	8.80069633688093	0.888521571429817	0.498855935832946	1.78111857072772	0.0748930825460356	0.500657171012028	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3792813467046	4.19011706352935
Merged-chr1-56100272-2	4.9482532815322	3.29227044000242	0.782320747527227	4.20833839625075	2.5725541252372e-05	0.0010755350087508	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38497296950891	4.0949824832327
Merged-chr10-67259941-2	3.54221129202528	0	1.38031812868491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135118639-2	3.30974463869296	0	1.32422122308887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80376159-3	18.6083044124055	-0.761927380721274	0.389274890955401	-1.95729906660886	0.0503123171885026	0.372460482496872	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.89014959007451	4.20402633825294
Merged-chr8-40449450-2	5.65205135986589	0.563845427359076	0.673098409115051	0.837686465639379	0.402206816697238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68682128711585	2.42760559021134
Merged-chr7-63908879-3	5.26595832203535	0	1.30541760741727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24973167-2	4.00831684632721	0	1.33625323107291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10645890-2	3.9553329769785	0	1.33011909762003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8260471-3	4.61298439525987	0	1.31103079780215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51743608-1	3.08546162781064	0	1.35121087683891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13761159-1	2.61370656866785	0	1.38924562402584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4370697-3	5.72056205484336	0	1.31499803025167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142525047-3	3.93331607832751	0	1.32012997956598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191449675-3	10.929017191713	-0.936153420796374	0.53880588057106	-1.73745954629185	0.0823060885686768	0.536068340836117	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72318825342688	3.92175658350218
Merged-chr5-113180403-1	4.47481909678792	0.764249374988626	0.964693471436511	0.792219909864833	0.428232461390648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14953280217139	1.85144754364776
Merged-chr2-145720929-4	5.98005228670873	0	1.34772660321378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145018417-2	8.66231176986975	-1.05485557974848	0.936264997182566	-1.12666347980836	0.259884788727638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97151590695197	0.989878296978726
Merged-chr9-99062712-2	3.60330777207496	0	1.33899146715146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82927341-3	4.00326677912508	0	1.32653907085931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-36013045-2	3.06171873430189	0	1.34097280855062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41550722-2	4.09173015738113	0	1.34240720749547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156967321-7	15.055048708557	0	1.28894419682464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126135616-2	2.85539954729891	0	1.3801527922331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30786315-3	4.91808773825085	0	1.35906884889617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131587073-1	2.8008516497567	-4.58108546488762	1.16509062281217	-3.93195634330167	8.42573694489465e-05	0.00276399702008577	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39619275160218	0
Merged-chr12-72694082-2	3.89142907250606	0	1.32346450692598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125526193-2	3.93306067911732	0	1.33576966907682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95427693-2	6.66435539932095	-1.47261475737381	0.870297764945295	-1.6920815112818	0.0906304331310051	0.575615946313965	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54475498406995	1.11548603074465
Merged-chr3-8816958-2	3.7815510471355	0	1.4302265585503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34066323-2	5.78713031196443	-5.15414575675499	1.07676434823445	-4.78669800426265	1.695476612039e-06	0.00012354120863805	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87275167685795	0
Merged-chr6-122801188-2	3.69336161169965	0	1.31370997144864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103347396-3	3.72971790202749	0	1.32320798566259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154902325-5	8.6183809082975	-0.717420185700941	0.556455911891189	-1.28926689495075	0.197305315841022	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43891683873301	2.98459585107782
Merged-chr14-27351167-2	7.98427890184233	0.662528163196138	0.647558747005473	1.02311669213008	0.306252675581875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67399359287628	3.21918377963308
Merged-chr6-81440718-3	6.30030602500169	1.09853742243885	0.785153430725924	1.39913726343039	0.161771825240487	0.874614922022557	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62272094453136	2.34258099779799
Merged-chr4-137807528-4	9.27954729179794	-2.06672455918535	0.775528567320297	-2.66492382908157	0.00770057627065563	0.090228053968489	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83243136198527	1.20275690226768
Merged-chr16-33416474-2	3.08532850361932	0	1.36378639891911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25761487-1	4.17555292283266	-1.0388523469302	0.788978706063322	-1.31670517714431	0.187937467586115	0.974660881513435	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88653269186897	1.90927269178975
Merged-chr8-115234253-1	2.33053873594762	0	1.40351405385011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95961277-1	4.70217187961405	0.411209621146298	1.21030931355789	0.339755809973473	0.734040428799233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.709714069046076	0.581381506691384
Merged-chr7-126749109-1	2.50577923273517	0	1.40146953342712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99956309-2	3.15286168693453	0	1.34983673456453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31110338-1	2.20870194798375	0	1.39936315744006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52631115-1	1.05074112633394	0	1.62046355395353	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5109973-3	6.45561934890151	-0.495442562533096	0.743281302545385	-0.666561315125836	0.505052386136661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49291066003692	1.69453213775868
Merged-chr17-78604128-1	3.8791145423404	-0.853154389423742	0.803395645064715	-1.06193554155377	0.28826494871239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50213296350504	1.41959898789419
Merged-chr1-34201635-1	1.78561580377385	0	1.47347135501527	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25522714-2	3.44479637266423	0	1.41786597355602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63912784-9	15.2582214616985	1.23189173369074	0.562244564101143	2.19102471121292	0.0284500042714372	0.24594443433276	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22703698110588	3.41852851987129
Merged-chr17-71966426-1	1.39966918176831	0	1.63305359340053	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114460040-1	2.33633428604961	0.754456738936841	1.41218342304347	0.534248403306471	0.59316968476107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.306240821987646
Merged-chr9-63421434-1	1.99268795771541	0	1.49059413739074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75196322-1	3.89531497365285	-2.0450034450027	1.24439915584269	-1.64336614614453	0.100307200116126	0.622180759258504	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17433619252548	0
Merged-chr14-122049288-1	2.41751170363618	0	1.40114126188048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76516122-1	1.80409899755859	-2.52509145838212	1.40572283726957	-1.79629397163866	0.0724477761130456	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51737993598506	0.423054662900563
Merged-chr15-86147446-1	3.02102786738868	4.17332004083503	1.19454748122082	3.49364098660181	0.000476481315841053	0.0106085683355875	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	3.22372608145735
Merged-chr1-161376956-1	3.82485068561925	-0.91491366755463	1.06210665416627	-0.861414118785288	0.389010002689201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39208810573971	0.851599296279844
Merged-chr2-45103014-1	2.21277800453847	0	1.41456754989297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15300842-2	3.59431308016225	0	1.33612793894894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118017305-1	1.52337433107939	0	1.67256911720894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39735106-2	3.2349748868137	0	1.32469814716799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37721610-3	3.49747114065833	0	1.33915369904398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30618353-2	2.51892224330122	0	1.41376975460697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72748630-3	5.58395843001868	0	1.31561765510111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70784221-1	7.14286624907461	1.05679281776405	0.617981261359241	1.71007259255669	0.0872524501914388	0.559089881369853	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6939232419255	3.32140467863878
Merged-chr2-77202156-1	1.70220392178908	0	1.50022270054671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79125992-1	1.4660629073668	0	1.56707096268442	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143975535-3	4.41030364008278	0	1.30145820568958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101012301-1	2.73580237667685	0	1.37344792031551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-62003789-1	4.27952629430272	1.70654380284742	0.721552827789899	2.36509890491945	0.0180252564021925	0.172912273173469	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5203912389657	4.14165163666735
Merged-chr3-54111355-1	2.33283230453586	0	1.37195064348695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67571935-1	1.91596984264813	-0.422541694469346	1.57992941386732	-0.267443400167515	0.789127787450232	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0
Merged-chr12-44548147-1	1.35290261578515	0	1.54397939098294	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-94017936-3	4.05023251892672	-0.610163203016141	1.24463899604622	-0.490233075578072	0.623968978208435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.798607537067202	0.306240821987646
Merged-chr3-146111731-1	4.19698282188478	0.775958068188265	0.940862258714789	0.824730783917529	0.409524450550336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74000136576932	2.13939166524368
Merged-chr8-77484401-1	2.31452665579258	0	1.48524126622299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-28485831-1	1.8109469563077	0	1.39987104135829	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163848980-2	2.47896744419186	0	1.45618973579714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46444455-1	2.48071325638321	0	1.37000694513472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47374645-1	2.21475605677356	0	1.37645096097166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107762956-2	2.27659105553566	0	1.37760535743505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12059645-1	2.5240356245459	0	1.45228940328481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80358023-1	2.59711767326177	0	1.33563557842389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89028515-1	5.85009230198352	1.54326956082783	0.830314655283625	1.8586562949448	0.0630758721190268	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51854386649014	2.56843324598166
Merged-chr10-85355390-1	1.64557518584551	0.0901684280581989	1.50451332583875	0.0599319570718531	0.952209827569382	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr9-109046424-2	4.92894667660432	0	1.33805959902347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139727158-5	12.9279520102939	0.339576502845287	0.473817496529414	0.71668206710937	0.47357029349852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42716558346964	3.96323632588277
Merged-chr14-67811304-6	14.8335704292329	-0.702330960683832	0.603400232872479	-1.16395540210582	0.244442085750494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57734498676887	2.6610376730509
Merged-chr18-11793285-2	7.17930221885422	-1.13037272026714	0.669753292187207	-1.68774492556161	0.0914602038128642	0.579404602845897	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11470331480811	1.92928224843372
Merged-chr4-133879424-2	7.86485195136196	0.364432342752824	0.540591666806049	0.674136071882094	0.500224808173415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42859409146819	3.19546115298747
Merged-chr10-95476167-2	3.40564668966166	0	1.32246421110064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161352199-2	4.83379808099475	-4.68238205754581	1.09033899730732	-4.29442775972365	1.75144497736667e-05	0.000794791135354186	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38412048047966	0
Merged-chr10-4405119-4	10.6703168533275	0.61398054545143	0.674122787248661	0.91078444026096	0.362408962413899	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21877132572476	3.18423239235348
Merged-chr15-85090957-2	3.51473426185323	0	1.32101337849056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41999309-6	19.4017285944473	-0.169456067650375	0.435931368868386	-0.388721894664883	0.69748188410922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.90608458139801	4.48593626509972
Merged-chr8-80992121-6	12.5025659499781	-0.370853839430667	0.487493021705902	-0.760736714000387	0.446814341201997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41970518442536	3.20726183519
Merged-chr4-138319694-5	11.1825060457256	-0.760571139658955	0.546810617573052	-1.39092240570355	0.164248957689454	0.88308477778304	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73018700979929	2.47092068604539
Merged-chr2-85560417-3	5.52302815127626	0	1.32581934130291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98513839-4	4.08292214405697	0	1.32537834296341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44126257-6	12.2053936006084	-0.495702095378807	0.498957629632778	-0.993475329245155	0.32047836742452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6064202897682	3.14122123123162
Merged-chr7-100208054-4	5.21497198697032	0	1.30761131433289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8889464-4	5.54903280962591	0	1.31519046160597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54627154-3	4.90126740842813	0	1.33110112836306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51165539-3	9.52179774202238	1.04669936107771	0.599922418774217	1.74472453157587	0.0810328309860092	0.529941090233362	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87192937507686	3.63067865034235
Merged-chr2-162958424-3	4.0436839988666	0	1.36311854898563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131393845-1	6.93122940209723	-0.281870513245937	0.640858747407304	-0.439832512837329	0.660058417678429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66978455844529	2.1552264446993
Merged-chr6-108449123-2	10.9381216204064	2.0711198425804	0.523859337757533	3.95358008019133	7.69904799631905e-05	0.00257973440488563	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88578596617927	3.91475812496089
Merged-chr1-161552238-2	6.77433115482649	1.62559502145986	1.01426985148013	1.60272438255718	0.108995517911269	0.662116154515644	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	1.29684500016202
Merged-chr5-136248299-3	5.59399645746057	-1.11543408614642	1.07501887465334	-1.03759488549084	0.299458700030878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26303439617602	0.609949614787909
Merged-chr3-84390993-1	2.78029036963686	0	1.33239833697984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12969363-2	4.15941617520786	0	1.34311330071684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110813292-2	3.48772663447611	0	1.36919960317366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32787869-2	5.60064095413224	-3.52484267903008	1.07700680437167	-3.27281375077893	0.00106482618384952	0.019943287993646	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9966024177648	0.382164212378408
Merged-chr4-59594689-7	12.8162186407378	0.306395433332707	0.60895355751253	0.503150740401747	0.614858294808091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87607942607076	1.63900399389441
Merged-chr5-105746225-3	8.4978034506026	-0.389778890834703	0.736683701371475	-0.529099381605778	0.596736510411099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46762260187864	1.51124524563069
Merged-chr6-34927354-4	4.940436161143	0	1.3051741488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73675642-4	4.511424000305	0	1.34230938348711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45068116-6	13.3711535350757	0.332876490198619	0.525386078032311	0.633584527868186	0.526352000773413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76278887749652	3.3811700253699
Merged-chr12-102391008-2	4.80058466887383	0	1.3243900310986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110713210-1	3.23524426962168	0	1.35442707891188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46704363-1	2.28190053273031	1.25708302272355	1.55175089243914	0.810106202515268	0.417879139769295	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr7-142356276-2	6.6979750257478	3.06733061288417	0.811703761755536	3.77887938605854	0.00015753570085056	0.00453553503985349	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01276722837733	3.61810980047629
Merged-chr10-42780926-1	2.57528039384818	0	1.37269179623142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82970871-1	3.4239873962001	-0.192926949134141	0.999404593795133	-0.193041887471741	0.846926163550207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48509240484528	1.16585218386913
Merged-chr13-41825649-2	4.92295813584793	0	1.31447024358172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7870505-1	2.80601974698557	0	1.33445465704323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63416065-2	2.93444381319852	0	1.4059730585358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22814221-2	2.51472717382547	0	1.43612674977968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89553398-2	2.59133069927187	0	1.36380867387798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30994457-2	2.54195098162409	0	1.43248871755111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-76266920-1	5.79189058964822	3.20342096984805	1.16777154335918	2.74319149842714	0.00608451906857982	0.0756179123346171	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.531725110705892	2.74284746555225
Merged-chr13-101743430-2	3.00806502933148	0	1.34148221752147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51788368-2	6.16787908551531	0	1.30974517295835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25109841-2	6.60202300807088	-0.649171071425124	0.727581855372577	-0.892230979417016	0.372269140458189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03633760219721	1.69453213775868
Merged-chr2-79677832-2	3.16645946756789	2.5324234933878	1.20905647525519	2.09454524682422	0.0362114368445105	0.29386071279898	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.19380919831911
Merged-chr7-97315861-2	4.19817045105261	0	1.3582782729114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-56486680-2	3.6120327533445	0	1.33816265368116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45489664-4	13.3175257373501	-0.635547078789279	0.728297039649422	-0.87264816989399	0.382854876367669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4329660070171	1.8405601103675
Merged-chr17-35873937-3	4.06565674909152	0	1.32928076225611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105748538-3	6.25044309358542	1.91529953533434	1.27314610136151	1.50438314446873	0.132482741752191	0.76033877064278	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr9-96167371-2	3.4193689735315	0	1.32620616395551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129406651-2	4.17720401847804	0	1.30747309324151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14506921-2	3.1805765158412	0	1.32041713820414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35597338-3	5.02496078683935	0	1.33404822906009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100676326-7	12.8880953849018	0	1.2844380425994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40868930-4	5.05492873580438	0	1.38312057660034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133548938-6	9.0382522609841	0	1.28914503900232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56675562-2	3.48368427818381	0	1.33202886501304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54655895-2	3.63419963384182	0	1.35896229036278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27349132-1	2.04137283161154	0	1.37925023966812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36816151-1	3.01947892899097	0	1.35849515995019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87755368-1	4.98513157946708	-2.31282632572307	0.939514016596229	-2.46172625939336	0.0138270153962678	0.141178148138206	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70990791143703	1.15868211970568
Merged-chr13-75786491-3	5.65134845182151	-3.89579739349483	1.06418423719173	-3.66082982376756	0.000251399701346488	0.00650870241053393	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42212821073697	0
Merged-chr4-132337825-1	3.34177000482479	0	1.34805818872863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107611414-6	11.6871299311026	0.684245873810705	0.42500934446863	1.6099548932652	0.107407703883963	0.655031620905405	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52106924453628	4.03205332266813
Merged-chr5-117313611-2	3.26496453098259	0	1.35531344564811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125382213-2	6.86269428848572	0	1.43354534802968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54908476-2	4.98651690539686	0	1.31951241198417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138659105-6	8.86795594140617	-0.55973489562825	0.674606450115579	-0.829720640133742	0.406696748952375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1892383828506	2.21836476644116
Merged-chr5-146785605-4	10.2784965976436	-0.667970368180759	0.581660884767269	-1.14838454101658	0.250809852606529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5261763824828	3.0479809929552
Merged-chr5-66364071-3	5.10948361793684	0	1.33062441852231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24328157-2	5.4324242344049	2.83496980112406	1.15761687286952	2.44897069796217	0.0143265102567253	0.144829848272892	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.26192334845542
Merged-chr11-9531056-3	5.3681859594913	0	1.32877039977556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103388728-4	4.59633403474358	0	1.30737727172005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26311729-5	9.49096415207845	-0.639369315469647	0.670156988529701	-0.954059013653502	0.340053771284341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08018932794267	1.98531404180197
Merged-chr7-143283992-3	4.71339546540298	0	1.3152559081119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82197961-1	1.64447585884525	0	1.50306037347213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34129155-2	9.30715870924077	1.7360398549323	0.533580237641951	3.25356850284482	0.00113965243859427	0.0210227513726193	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86396437183818	4.44947080783995
Merged-chr6-140953965-1	1.60162068546702	0	1.49831314479208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24559422-1	1.34051964451284	0	1.48558665318226	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100974100-1	2.14176363205525	0	1.38466588805152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3695951-1	3.32109494367179	0	1.3665420184833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4742060-1	2.15497567085718	0	1.41254334703167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74484160-3	4.0267019309558	0	1.30986221469986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137173048-1	3.4972574300873	1.956332240475	1.10254277917047	1.77438216224763	0.075999958361067	0.50593859811148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52959284535517	3.77312233455388
Merged-chr2-27768519-1	3.45819665389009	0	1.37079175215613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-118379356-1	6.2720709289924	-1.34695119397579	0.738412242168475	-1.82411817824178	0.0681342078931426	0.466209209317832	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11219006822349	1.99834080004871
Merged-chrX-12088972-1	3.44670893770878	0	1.32426636825648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124947466-1	3.80021620431047	-0.0752594188987985	0.703371507522787	-0.106998105686504	0.914790482571835	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.742577737214	2.8549648780937
Merged-chr1-170812824-1	1.55037635355854	0	1.54893066955238	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24153758-1	7.20320344890631	-0.570356314551702	0.75295662081046	-0.757488942640265	0.448756987945094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36531604202151	1.72189711188045
Merged-chr13-96015640-1	2.67721890272714	-1.26321276331512	1.29481144820086	-0.975595917900136	0.329264748240401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62938338279536	1.5268023559189
Merged-chr12-8387117-1	3.79390627032442	-2.54178918621629	1.27999001354837	-1.98578829468363	0.0470568360350766	0.354996075680918	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42287298012025	0.805218875278971
Merged-chr4-139197152-1	1.48462250457465	0	1.58556028041667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8746519-1	2.74359996992247	0	1.35483864236515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28308927-2	4.73249940520444	0	1.30216078553374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47471907-1	1.31171190803609	0	1.50584872945938	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133334943-1	2.30668673596404	0	1.47297386014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167587058-1	2.67875242361496	0	1.33841837789101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65102603-1	3.17683969599819	0	1.41235869003854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129016403-1	3.26812477229162	0	1.35353666525577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85127379-2	1.82519910021088	0	1.62622465557659	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94597197-1	2.46355939792377	0	1.41763543937065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-97068939-1	1.95598926117617	0	1.36213512979949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33927752-1	1.39787442489426	0	1.46387918089572	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24041626-1	1.52055881701087	0	2.28424521287695	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59309880-1	4.99329675359229	1.03897006293017	0.798861226299551	1.30056388860283	0.193407774409446	0.994055720195031	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9978184983037	2.56877836903109
Merged-chr15-14485100-1	4.53587385646037	0.626611382343852	1.14483432045533	0.54733804808947	0.584146508723534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45442689583501	1.64536602019594
Merged-chr13-36529055-1	2.01208681132097	0	1.46643096678326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44988915-1	2.76241553148626	0	1.49982531211504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30650149-2	7.09868178116384	0.141985889903684	0.628466429997719	0.225924382157054	0.821260233830553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71159266416058	3.93393177447526
Merged-chr4-89178138-1	1.91436496216611	0	1.46675863464896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97936961-1	3.54238122358493	-2.84054539427261	1.1121150735156	-2.55418298152648	0.0106437304924468	0.116425378767899	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.622287075899	0
Merged-chr17-64548751-1	2.18109673603484	0	1.40455691503657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53112469-1	2.08811143894227	0	1.3872639117041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9516657-1	4.78544763322821	0.646408782515897	0.781769824579033	0.826853073875005	0.408320343678308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86013713939484	3.47399982341541
Merged-chr3-51653322-1	2.45624922417208	0	1.4169828319716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18899484-1	2.08318061060982	0	1.35979051382181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40248974-1	3.43989559795261	0	1.33968198945469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89590031-1	4.70030276798815	-0.990764730885865	0.827867956486958	-1.19676661371236	0.231397534666324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9391136648332	1.47711801254374
Merged-chr11-94972052-1	2.22224147816973	0	1.38076102757349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29276893-1	3.08910140465386	0	1.60044150447034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142343964-2	2.80145176657159	2.42657810488014	1.40487631481172	1.72725390790388	0.0841220731091845	0.544692924038126	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr7-142737122-4	11.6124438395967	0.943858383405947	0.439083564136678	2.14960991596612	0.031586083403574	0.26636007305329	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82614430353173	4.65128799342655
Merged-chr19-37702892-2	3.82102273174924	-0.303137045733834	0.856516267745797	-0.353918608611648	0.723399880836197	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92595998085933	0.887107926668329
Merged-chr10-93690257-4	16.0234552467315	-0.488637835054473	0.518588297253554	-0.94224616645285	0.346066622681024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05041670295554	4.30661755114891
Merged-chr4-140714019-3	4.80461500289893	3.11866125437744	1.12177914447294	2.78010272319934	0.00543417056840969	0.0695170698043454	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.19133112147929
Merged-chr14-66171509-2	9.35941121047935	-0.719749911792848	0.498283850196037	-1.44445763495983	0.148610288475098	0.823741446322314	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69858231099877	3.0219634810454
Merged-chr4-122902330-3	4.06916824346412	0	1.30383109299568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35896347-3	8.72951358081666	-0.259030552401882	0.564323410338673	-0.459010821908713	0.646226394771204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47116180978485	3.39460170076552
Merged-chr4-57017415-4	11.2344039882883	0.0518166810793189	0.422782480127427	0.122561088774779	0.902454668730743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09090682225268	4.07490433246132
Merged-chr15-82807591-2	3.47923963791614	0	1.31190009556075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47405735-2	4.86365682213328	3.14974764787813	1.1653560574163	2.70281999036537	0.00687539699655135	0.0830615071430291	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.845523456341755
Merged-chr5-44075648-2	4.31005418471167	0	1.33642683594778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134258580-3	5.97708549204964	0	1.34786966284365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73467240-3	3.87200834688985	0	1.33496379042753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119273532-5	16.1886608621654	0.495060916730762	0.455607066701977	1.08659622054237	0.277215296095266	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8279585627305	3.95364096920676
Merged-chr11-107113342-2	3.04290527315449	0	1.37206243144364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100429330-2	3.22547700097543	0	1.34169245291389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25249026-5	11.5270680733342	0.608131705597624	0.590636370540617	1.02962116105548	0.303187877702553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11779002910541	3.33065134414103
Merged-chr1-162624060-3	15.9132260865278	0.294974758632541	0.429902359620358	0.686143613849967	0.492622550498979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.04966884783568	5.27290147134339
Merged-chr16-21702876-4	9.2591464579996	0	1.28501209165334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114971163-1	4.36054888911298	1.33478693830319	0.790736445687587	1.68803012126565	0.0914054469815797	0.579187442332211	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32353798893003	2.64278934829378
Merged-chr5-102571621-3	3.18469231383303	0	1.37881708754297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156407014-1	6.03205994739707	0.415862022839272	0.729610832513921	0.569977862590654	0.568692712854859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26928582663957	3.51938584585922
Merged-chr1-134072794-1	3.9070970120298	0	1.38479942571569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47247049-1	3.16263138482936	0	1.34413604163909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129649132-1	3.40405321197758	0	1.32237836804309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127353009-1	4.25185212775187	-0.530257843824559	0.787400935949721	-0.673428008038866	0.500675035119803	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62510019068651	2.1098084132927
Merged-chr9-102852400-3	8.43697238829507	-0.132310336384074	0.611446477091382	-0.216389073028055	0.828684482974119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27442330138213	3.99295027612007
Merged-chr10-75055845-2	2.85299221311449	0	1.37396638201684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153058555-2	9.38171165827564	1.21329002517923	0.660826668552888	1.83601855511696	0.066354912453573	0.456789406370729	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88106791136033	3.2626815664136
Merged-chr3-153636653-2	4.41298507641244	0	1.33648044786496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-70883664-2	5.87931255646341	-3.6229589200012	0.932006658635315	-3.88726720612286	0.00010137913630799	0.00320654455042688	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56518057068801	1.07938469868934
Merged-chr4-142166143-2	6.73698479309589	0.563106047032789	1.06765347487363	0.527423981923947	0.597899193234618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	0.890396206374751
Merged-chr14-19889794-3	4.10240705738808	0	1.32072579102768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81190308-3	5.13564690165269	0	1.33911822943679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180434332-4	4.95636104925319	0	1.30040176999338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70769736-2	5.22343891771063	-3.01427983003912	1.11078819129835	-2.71364050649104	0.006654834019822	0.0810411449607321	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90590773318826	0
Merged-chr5-99269258-1	2.41961719098753	0	1.37173912980483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54407690-1	2.0844056667888	0	1.40627650351753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9337666-1	7.03150501987207	-0.525304774565994	0.681633706579539	-0.770655514091273	0.440911146747754	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97771568595695	2.37441905672497
Merged-chr1-106882923-2	4.01346283824291	0	1.3430589127487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19707500-1	2.77820054037458	0	1.37419572498829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97647791-1	3.77643776344674	0	1.33061602775162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117176500-2	3.11869539737793	0	1.33621957081162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64753861-2	3.65468464161636	0	1.33809121214028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67176067-2	3.92227706028043	0	1.32886831598213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152152613-2	4.21450259913873	0	1.32700477991882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73774195-1	3.14039705699124	0	1.35742982263194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-48590618-2	3.89008098064125	-1.2982095855628	0.910971981201669	-1.42508179433831	0.154133558605188	0.845676869908869	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74163898271307	1.47158896970822
Merged-chr2-167417838-2	3.07814819474243	0	1.3254475346863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122209094-2	4.12209612986981	0	1.33111992883788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5629298-2	2.71776748591431	0	1.33414061875356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32032942-2	4.20502821410195	0	1.34558016600935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31511966-2	3.37458765310641	0	1.38773259745908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46810260-1	2.5400421843935	0	1.34532681421601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53235494-2	4.11008572285019	0	1.35113272000513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115701949-2	2.94427591668144	0	1.38523282125295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75655420-2	3.11763694052381	0	1.36677856081078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118534105-3	7.56022402039119	0.811379727296327	0.725439971458082	1.11846570249708	0.263368146839192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15383647884817	1.5268023559189
Merged-chr2-103849038-2	6.88208199157829	0.627451209645906	0.565288647411904	1.10996605454329	0.267013654412481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4771920991234	3.14529268526927
Merged-chr3-136078781-2	4.3699444856454	0	1.33951505243204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87870750-4	5.11513726511535	0	1.32797545257782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141860750-3	13.0934591527599	1.91259183738875	0.709275694825021	2.69654219275143	0.00700635209111702	0.084149795307826	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8668559247328	4.38016138425524
Merged-chr9-116115040-1	4.65479441773204	-1.6012776491183	0.80246195209013	-1.99545616455402	0.0459931505426679	0.348699730621204	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62294782132401	1.77796484182175
Merged-chr2-49727385-4	4.47020280941769	0	1.32832419851457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10984839-2	2.86801989290557	0	1.39193004079789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57344991-2	2.8404961639831	0	1.34314925637262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40217987-2	2.93900912716786	0	1.32715761338654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28428996-2	2.99740215679251	0	1.34317057344868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42177098-2	3.54271926224689	0	1.35643549626966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6442038-3	4.47896029706115	0	1.32824174934788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31270087-1	2.83568265763004	1.94697041556935	1.29869514945519	1.49917431845812	0.133828415592201	0.765210469278203	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.844015785373878
Merged-chr7-35137719-3	4.90106531387824	0	1.32426917523965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17936700-1	2.64462637310774	0	1.37640931866503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147574690-3	7.12829250638135	0.0660968551916039	0.930816632885411	0.0710095338398845	0.943390167740233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20617892157811	0.825079211029734
Merged-chr13-74765898-2	5.83871162768605	-2.41008281582781	0.731395774941866	-3.29518285229276	0.000983576567392778	0.0187987114281511	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91928962763364	1.26501898168246
Merged-chr11-85686408-2	5.4361146766501	0	1.30685523975586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165855949-2	3.83650096105346	0	1.36749441418783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78143992-3	5.53754428171429	0	1.31191366561813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-9082859-2	3.64199260141014	0	1.32875176825454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38159377-5	12.1813070528138	1.18322257389595	0.541086502694192	2.18675307553307	0.0287605547102675	0.248005701781095	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07504660389059	3.97823708463513
Merged-chr9-7789227-2	5.51500228571293	0	1.32105372207252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135658377-4	4.77086956492196	0	1.30525104252161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16466489-2	4.54913061915963	0	1.33535786977363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41582555-4	5.53496975538558	0	1.30255699334104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69017371-1	4.46116764865262	1.90966800471429	0.833057400308552	2.29236065126722	0.0218848406437146	0.201052551202611	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36196353701645	3.23468700265025
Merged-chr8-80961431-3	4.42207824742013	0.230434730917968	1.29490724082873	0.17795462381575	0.858758611801315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.382164212378408
Merged-chr5-63953774-2	5.26133545871127	-2.11608369331625	0.874095911419774	-2.42088272656389	0.0154828712872211	0.153480538096898	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92421241775346	1.0023426291647
Merged-chr17-27038889-1	1.634757668385	0	1.48348014382794	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78410925-1	2.60774396661699	0	1.38156900818759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28416752-1	0.785677136570129	0	1.7889515197864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52919188-3	3.75422427073553	0	1.37375769990374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88189743-1	3.12299548688003	0	1.33698087915017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66873591-1	2.47541722230824	0	1.37471864145314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89553521-1	2.85942773324741	0	1.33881031021017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-91688054-2	5.19515019925771	2.45305983190827	1.50090844594496	1.63438338863091	0.102178373986069	0.631748323066861	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	2.94546104617084
Merged-chr13-23729751-1	5.48502115009152	2.2013655123739	0.887897050752279	2.47930265170807	0.0131639554289548	0.136195666792349	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25518019904733	3.94575670469938
Merged-chr15-39217438-1	1.80370256417668	0	1.37014381062916	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79227539-1	2.97011744090045	-1.88282485061282	1.25262665378224	-1.50310137895256	0.132812903293867	0.761631590929446	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95112669693092	0.892489746801999
Merged-chr6-52486817-1	2.81604734732414	0	1.34292215708711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78520714-1	1.99551593482377	0	1.3913477050882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170855068-2	2.21224869252594	0	1.58311985305972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105258382-4	10.3701270109823	-2.33353714867233	0.866930371032698	-2.6917238415498	0.00710837786010437	0.0849806183033992	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35645433206835	1.15637648126681
Merged-chr12-102502483-1	10.2439957246018	0.239643420202242	0.470873208222327	0.508934074008926	0.610798435106571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92363401703843	4.07344070448545
Merged-chr1-14590953-1	2.389019481751	0	1.38068282261918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24438064-1	1.98588884616299	0	1.36136602016652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88064347-1	2.42308152541418	0	1.32871545465709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34299061-1	1.21112675876717	-2.06074293889431	1.48165859567204	-1.39083520651369	0.164275404399358	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04720498017469	0.609949614787909
Merged-chr1-173802379-1	0.922457202397598	0	1.87398738442098	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21826656-2	6.81054062364959	1.07488393467403	0.92527529494311	1.16169094814113	0.245361023872262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12166491568223	2.96698957258076
Merged-chr9-103234230-2	2.93008458793676	0	1.33773715309572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55529724-1	3.37977954123116	0	1.32656108798847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74680516-1	7.04761416969745	-0.581105359956995	0.850775925398743	-0.683029858519611	0.494587975352697	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79661062651694	1.85139442775557
Merged-chr14-54239190-3	8.80471669001676	1.34555948175391	0.682281790574816	1.97214626030147	0.0485929123351896	0.36343738691259	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05501152474727	3.1751182937794
Merged-chr16-59604835-1	3.12780722914989	-1.01661062043118	0.930999109738045	-1.0919565978073	0.274852178692546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17162139808024	1.60572551668653
Merged-chrX-134913375-1	3.02462865015587	3.0016698896708	1.20065668676414	2.5000234644597	0.0124185080914777	0.130613202920603	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.735627456805112
Merged-chr2-90513064-2	3.36009353668677	1.00395594733592	1.03586096904538	0.969199513580605	0.332445653735556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	1.29606516661881
Merged-chr5-135191842-2	3.47930740094828	0	1.34203034286244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119798867-1	2.81211270608091	0	1.33399342092473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25078017-1	2.25570657751137	0	1.34926617613378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139006715-1	2.53561650547153	-1.70521694549884	1.44848952589731	-1.17723802278963	0.239100516360554	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	0
Merged-chr14-76722357-1	4.91304782101625	-0.668503626712479	1.10941596654769	-0.602572566890981	0.546793074735537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60913482751838	1.13132003301738
Merged-chr7-81841997-2	5.40725075317221	-0.834073947312602	0.700194669659211	-1.19120293748958	0.233573926655847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89347581659159	1.90329117160805
Merged-chr7-127763808-1	1.9310677638557	0	1.36809564936282	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104266575-1	5.83271854785381	-0.506497680740892	0.821083861574758	-0.616864737506202	0.537323947321624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19871478516426	2.0295486026821
Merged-chr17-17893500-2	5.06581529738477	0	1.33142460171696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95563648-7	17.3599524365281	-0.300440505272798	0.393702704001274	-0.7631151684237	0.445394714638893	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.65273748794267	4.3897045867083
Merged-chr14-74917853-2	3.49953300152292	0	1.32231787130299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68113381-2	2.46035602152303	0	1.37929479558763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84602474-2	5.30255156523456	0	1.322599182464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166116129-2	3.46027301907642	0	1.31089694514791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140370609-1	2.27553956329568	0	1.3979404824744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171291125-2	8.20218909154721	0.339256746759664	0.599606475308351	0.565799004397341	0.571530423362216	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94763071210053	3.50835595770238
Merged-chr1-132054612-4	5.05633978020402	0	1.30749914348135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128359342-4	5.69181188960638	0	1.30682263301962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97361825-2	3.36935415263407	0	1.36705298681846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156461212-2	5.77506901922528	0.135415912293917	0.686201890148899	0.197341211439295	0.843560531320284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36370426322275	2.779453068074
Merged-chr10-128519064-2	3.75064435211652	0	1.32462453358621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-36720798-2	9.69823351982286	0.448488751593746	0.845481252167528	0.530453810115804	0.59579732599881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26562155397695	2.09717297272874
Merged-chr3-98844052-2	4.2167229644561	0	1.3406506591075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152164200-3	4.47395997463088	0	1.34582283261488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11705925-4	5.42969441131882	0	1.34827789243566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151932368-2	4.12678633262468	0	1.31802928792617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78849391-3	11.069332263572	-0.504585788972288	0.5463629619412	-0.923535861910406	0.355728020602815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3616417017576	3.59010173332673
Merged-chrX-105884679-3	4.39397466120776	0	1.33951976932319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56470989-3	5.22229301369178	0	1.31888385831846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65441795-1	4.21858316594055	0	1.34659057752199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47499158-3	4.48726297226509	0	1.31549302742793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37759091-2	5.25460382634455	0	1.36245094591686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108669649-2	12.8219512673796	1.60937299937396	0.512211136402827	3.14201095016464	0.00167791760487065	0.0282882362765421	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84491225168311	4.65024758174149
Merged-chr8-70654336-6	15.7782476236407	0.656426568031409	0.48149501424964	1.36330916957548	0.172785093356566	0.9175863709562	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50168540259874	4.13165377128288
Merged-chr6-97408044-4	5.97116221489067	0	1.29277125860134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127568992-2	4.41095659273198	0.604487892291885	1.13100750850099	0.534468505070369	0.593017433959758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	0.918668513615376
Merged-chr10-68063794-6	15.8919095862201	-1.50030491076952	0.472821560917632	-3.17308903565605	0.00150826262957682	0.0260733867843246	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.96751558016365	3.01405708810591
Merged-chr19-32895834-1	3.98030712193463	-2.5980497105541	1.10171263030109	-2.35819181799166	0.0183642009757431	0.175391271113842	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22935095880211	0.423054662900563
Merged-chr2-49472885-1	2.54519846314681	0	1.34839981283817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38534018-2	3.45318073197244	0	1.37111271059111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62311018-2	2.27823768350279	0	1.4011207357407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40187751-2	6.59585035281125	-0.434771663535861	0.673725215302958	-0.64532490941482	0.51871665368691	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42759143161502	2.93857203456399
Merged-chr2-59802917-1	2.23524921117593	0	1.41983100914021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83260603-3	5.27910203261626	0.997391179067054	0.926644405335017	1.07634727337123	0.28177197389408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.668152277665589	1.34574950999398
Merged-chr2-91138766-2	3.59932922939588	0	1.33305547924235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97284000-4	15.3489050426693	1.59300827705588	0.514216214698591	3.09793474324731	0.00194874334449885	0.0318356456474055	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38687119390027	4.75461125546933
Merged-chr2-128714614-3	10.8575511885777	-1.46571483820797	0.625130824543441	-2.3446529600879	0.0190447969219421	0.180336371491266	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76189625094462	1.94792243194202
Merged-chr2-129805631-1	5.19827115217436	-2.75467444663529	0.904810788938999	-3.04447568520429	0.00233086270844269	0.036482048993029	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26996517887313	1.207189364431
Merged-chr12-40565011-2	4.07316357949207	0	1.3205287765023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-118855364-1	2.87287422946959	0	1.36203774556227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72847839-1	3.16706628074288	2.45507806023156	1.26980425831524	1.93343032530772	0.0531832085180777	0.387393818283614	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr6-134265005-1	4.30353756641021	0.294860216159282	1.03751455516733	0.284198630940388	0.776258164581388	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09052639048656	2.10134524129244
Merged-chr13-90056829-1	3.60171952509094	-1.50394050487809	0.74638666554012	-2.01496164697659	0.0439086678142289	0.338388803758871	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25306447913141	1.40264952818025
Merged-chr11-23597489-1	2.49133365501437	0	1.43452777945316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61151628-1	2.62711342871562	0	1.34623033394174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113553804-2	4.27036308385578	0	1.31903371389963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180771502-3	4.76193311029695	0	1.29982585662103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9938314-2	3.2604988763435	0	1.31663416152696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53662630-3	5.31932076490885	0	1.33132985849336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21615990-4	4.51764363928359	0	1.30621338344321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6369424-2	6.39567980714748	0	1.29900371226887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154041075-3	3.88016823181708	0	1.32436780957344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33988545-3	3.74137784901084	0	1.320959870868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62696131-2	3.44780927709698	0	1.3102340221188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105005237-4	4.36167370375361	0	1.31165444525327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31483139-4	4.31084916606884	0	1.31090093105761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22900078-1	2.97952217060292	-0.851006793944021	1.38068795197576	-0.616364322384529	0.537654094945306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0
Merged-chr7-143464097-4	4.24148297679966	0	1.32547403838936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-60629118-3	3.97001134200127	0	1.32832590618538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126250584-3	6.01475133662477	-1.20784181739825	1.21664786197659	-0.992762043271891	0.320825931385725	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	0
Merged-chr14-62860651-2	6.18895204184938	-2.25879807597159	0.717471057247578	-3.14827762479643	0.00164235630252744	0.0278330096056816	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63114932064561	1.34574950999398
Merged-chr9-55307729-2	3.7648301911206	0	1.31534340876146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102771173-2	4.22073385675587	0	1.31395954383897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25483437-4	4.16807712640257	0	1.34947868520108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100849306-3	5.43912783992741	0	1.34340259179245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29650850-2	5.72512057025996	0	1.32892738105733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19876505-3	5.50605740317208	0	1.31015103279688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35429208-6	17.4514560067605	0.567764329918781	0.402158956805243	1.4117908362134	0.158011557489949	0.860304950531828	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06887526846269	4.59614378041732
Merged-chr11-8533220-1	3.90869841630421	0.844585887219058	0.950560561595461	0.888513495448905	0.374264599767801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44483074455432	2.05801908341688
Merged-chr10-111831289-2	3.34975377579801	0	1.32342652937971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41303017-1	0.854566907791632	0	1.77807693596923	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23819342-1	2.95745854268546	0	1.39912019681358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36557721-2	6.11483175164409	-0.105952202579893	0.682014213582416	-0.155351898054085	0.876543903473599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57761819580893	2.58707500045288
Merged-chr12-79353534-1	1.17992680980978	0	1.79199101086188	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73514340-1	3.07023024967944	0	1.43141340990981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62153537-3	6.55938392132872	0	1.30867646971976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-70398276-3	3.73745223649221	0	1.32708881865288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17405255-2	4.80302120118921	-3.53432477944058	1.10754935562633	-3.19112169718332	0.00141721571410437	0.0248349096416905	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52799471274427	0
Merged-chr15-63123293-1	3.46323163358952	0	1.34310985226059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73737091-1	2.76848130755584	0	1.37934606121587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150759715-1	2.43764823095429	0	1.35433072286082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96408022-2	3.03593924462351	0	1.34481602207338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70661363-1	3.01698218359281	0.698053273286984	0.968957008122759	0.720417177888399	0.471268176660415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21860784935357	1.35032549026822
Merged-chr13-107903397-1	6.13426327834114	-0.99602067843458	0.969371533673096	-1.02749115672967	0.304189247422688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72082270412946	0.82780788634396
Merged-chr7-67217311-1	2.66166827358207	0	1.34207294512759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35164271-2	2.67790281841628	0	1.41771189247739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92718380-2	2.04805592538433	0	1.55172244345593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3499449-1	2.09961200287607	0	1.36934263947211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69411010-2	3.25749043957843	-2.09930823484427	1.23595369731507	-1.69853307563602	0.0894071955180355	0.569545973710426	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03062457639696	0
Merged-chr9-44391627-1	2.54972766662185	0	1.42938927678331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62641991-1	1.96025005459799	0	1.43739337457734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65202100-2	4.04916265224549	0	1.32741117511564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32555569-1	2.86123179774889	-0.905410064908555	1.14812232965263	-0.788600693083366	0.430345425734699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14271672203294	0.61242769162773
Merged-chr3-135713423-1	1.66805893549614	0	1.68069723922818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106340895-1	3.66713608024796	1.00749962332559	1.01217214298531	0.99538367095745	0.319549697326303	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59157903888808	2.31383855713236
Merged-chr15-6403610-1	2.14574715357595	0	1.37910460344399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91111321-1	2.0314056251941	0	1.45358912825412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84880538-1	1.84088764311872	0	1.43480915637764	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50607458-2	2.553562547022	0	1.45157471705047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55845234-1	1.8269002235873	0	1.58554489962636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150157828-3	10.7847570121963	-0.129634292352055	0.502159405364832	-0.258153667873397	0.79628831387301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68484434006794	3.45361094406118
Merged-chr12-71342580-3	12.2632695796521	0.837836427379371	0.521732941188043	1.60587220249411	0.108301992278786	0.65864277717628	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54317679848548	5.02534054658317
Merged-chr8-122618116-5	12.006647377804	0.230577869254453	0.412784513161903	0.558591376135315	0.576440626911175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68985052708973	3.77719567465888
Merged-chr12-33403666-2	6.42698869536282	-2.28566137276799	0.922348017930371	-2.47808997074306	0.0132087833024452	0.136572967354681	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80726802142256	0.735627456805112
Merged-chr16-44190303-3	4.67803836505918	0	1.33511921053792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20732491-3	9.12072200273274	1.17390165687182	0.475130539629838	2.47069291270222	0.0134851563185163	0.138666184881819	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74538498136268	4.32029138384526
Merged-chr12-104228358-2	9.82193484431728	3.2300811376744	0.605655195578509	5.33320140115217	9.64961823079118e-08	1.20779560914999e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86835223826838	4.71098546673723
Merged-chr14-9426931-2	4.39961283297061	-1.39490307804426	0.721445370688159	-1.93348399576494	0.0531766027510666	0.387388883318974	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66106701323009	1.48012756866106
Merged-chr16-11704331-2	3.41819698303955	0	1.38186402263179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75584907-2	4.16510791935873	0	1.31061841401268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83584317-2	4.16501221718321	0	1.3342576916137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132806358-3	4.51895250328515	0	1.36456783278053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25179685-1	4.1573801584177	0	1.32161061286037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116468280-3	5.12021983997739	0	1.30236697508536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41317816-3	8.34015181998843	-1.18669748848891	0.651790174333472	-1.82067409914922	0.068656411614203	0.468701738003718	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69783138653319	2.04415279089395
Merged-chr13-98807862-5	8.86150150685045	0.315258689347525	0.64983942745091	0.485133212960274	0.627581853729422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.431007026004	2.17343914874612
Merged-chr18-60908271-2	4.55497150266127	1.00663163419139	0.882256121122862	1.14097438384472	0.253880583076144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13459177597419	1.96027510505613
Merged-chr10-8342708-3	7.84914891684887	0	1.28618669703605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110446819-2	3.31123450223039	0	1.33873397506271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80260567-2	3.25443707237549	0	1.35993709135603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93485496-2	3.24510978550332	0	1.36383873601229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91840284-2	2.76636907968892	0	1.42292947714046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38709351-2	3.86283214818959	0	1.34169372878144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109596839-2	4.40513264376804	-0.0592464512200976	1.11416353889234	-0.0531757225505678	0.957591898839221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02654965983586	0.733321818366247
Merged-chr9-31285023-2	2.61351187284446	0	1.49036872979731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100047285-2	5.00682528981854	-3.09101965129064	0.990406049502009	-3.12096200628505	0.00180261289616249	0.0299652867750277	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59348591586769	0.683637474991079
Merged-chr6-134947581-3	3.15232689705078	0	1.38185899471888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83693997-3	5.66616691590828	0	1.3055789075196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148649471-1	4.8579997163256	-0.363070777694664	0.695049858392947	-0.522366522790371	0.601415160156628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30343406910231	2.26800305630894
Merged-chr11-17538469-3	3.168607272287	0	1.37516306634847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108353077-1	3.8649089509841	0.821208521801697	0.689355767304538	1.1912695312795	0.233547791063075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31292180301641	2.94922890105279
Merged-chr16-91524333-3	10.5609238538418	3.73493639241343	0.802720621987836	4.65284719254419	3.27382860054642e-06	0.000207700586146899	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857056700897293	3.79603832150636
Merged-chr13-37959176-3	15.5198412451095	-1.26417131446846	0.529618686339235	-2.38694620691447	0.0169889769246137	0.165006195914953	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73846301201299	2.06205865679497
Merged-chr10-4338983-3	4.62806446610476	-3.98490192899829	1.05128942541396	-3.7904898809661	0.000150350458154129	0.00437817919317135	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87285755569544	0
Merged-chr4-85703996-1	1.76213095572903	0	1.62126080060924	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124455541-1	3.26072737512477	-3.46667245177565	1.22910411252282	-2.82048722842533	0.00479507821934308	0.0629827500143101	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73353381504538	0
Merged-chr17-36182547-2	4.85375689529006	1.92169010485741	1.29753564295388	1.48103068712827	0.138598396298866	0.784278732641645	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.688405034366054
Merged-chr3-132176978-2	3.40524739203641	0	1.36198509731342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11187752-4	6.0113163967139	0	1.29723572332601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170706289-3	5.83746015862414	0	1.30795572038501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114870231-2	3.31979637112737	0	1.35296191493064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32192592-3	3.72356066407674	0	1.33821541498466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58578892-4	4.81565989062229	0	1.3226871695012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83077536-3	8.17183487205314	-1.32261996471242	0.542071028884939	-2.43993848450653	0.0146897631160723	0.14736218307996	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17263496130022	2.48853090112376
Merged-chr2-158180951-2	2.66914056826101	0	1.41103127874298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122989186-1	2.75977897896677	0	1.33256819311157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8838840-2	2.31526446424628	0	1.35016529570366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86976700-2	3.80166996058751	0	1.33049116457165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111843651-2	3.38316170096524	0	1.36571997320148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95302789-1	5.61619097540685	1.41245005531978	0.880100855098236	1.60487294965999	0.108521767651758	0.659855162275219	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17267789052377	2.82339894246671
Merged-chr6-125083173-1	1.54698591369411	0	1.45344733284651	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103174993-2	3.86027335685943	0	1.32199851823005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72963622-2	2.84210947892037	0	1.36994068996111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115107722-2	1.93533449510305	0	1.5509880838467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31564142-3	4.64484461290581	-4.70519169571905	1.07624719153798	-4.37185038224836	1.2319794242447e-05	0.000596743180805856	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.449410915701	0
Merged-chr19-41242206-2	3.62867240500069	0	1.3918181909917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87734923-4	9.38150088151616	1.98816944728827	0.541681145862505	3.67036855994418	0.000242200990420797	0.00633835239088402	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56996235349426	4.36354523199154
Merged-chrX-61653265-3	4.09418242290406	0	1.32474014630704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132838278-2	5.12814567832582	0	1.31464325721362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160010838-2	3.69980430994489	0	1.3227906808794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83485476-2	3.53998552444045	0	1.3299238755605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60672488-1	5.80289788799397	3.49688122057672	0.927325314820186	3.7709325569903	0.000162638627529788	0.0046551834229354	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	3.05231067795763
Merged-chr7-24474089-1	3.03809061967772	0	1.34186775684516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103421528-3	6.46706144571786	0	1.29817999451411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70743431-1	1.96810786702659	0	1.36689771402198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86503615-3	4.1855697047741	0	1.30768245170517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61549023-4	10.855704607422	2.21953545847623	0.548796063680575	4.04437204521952	5.24635514085607e-05	0.00189196256956945	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05521544639664	3.93325161960326
Merged-chr19-32112061-3	4.27620473231333	0	1.31085251862476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136467520-3	5.82777330353144	-2.74168692203954	0.952552177616658	-2.87825379697247	0.0039988328251755	0.054965866595271	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15549272149199	0.666688015277142
Merged-chr10-91209480-2	3.8020663510164	0	1.36980544179454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24633901-2	4.64689663584802	0	1.31343473281718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102886705-1	3.86402725818882	-3.82073143051928	1.1097694072561	-3.44281560253676	0.000575691701583781	0.012257787530692	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80823943009278	0.727201944460961
Merged-chr7-102015029-2	3.03665926418909	0	1.34086303546354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27338631-3	4.07011923271472	0	1.32673153718292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6553823-2	2.64259630815123	0	1.39689049756151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23651482-2	2.74429673013712	0	1.39379799438945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62922843-3	3.71618657368596	0	1.31549805176912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5052576-4	5.20349978017502	0	1.31465935122571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99084377-2	3.05574985511071	0	1.32427077137182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73105580-2	3.08863775570201	0	1.32958229922874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-53608380-4	5.27763615214543	0	1.34474972635746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101174550-2	3.33794026808792	0	1.34008596177872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-68223381-2	6.63252788185448	2.19774531358983	0.726327208919604	3.02583365541121	0.00247948670399466	0.0383272173500881	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05916866271297	3.1211594341346
Merged-chr15-99121047-2	3.81881528186569	0	1.34159341615151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36867755-4	12.0469525174726	0.578747092150243	0.46865595321067	1.23490822678205	0.216864661337205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28182507677905	3.9692163300066
Merged-chr16-49906409-3	6.03669585747266	0	1.29680651345572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36899157-2	3.51610338763446	0	1.32187460538787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151625899-2	3.80792206256149	0	1.30938336417562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136034664-6	15.3296231814847	-1.56704937260195	0.550336918513964	-2.84743639738606	0.0044072899998446	0.0590315421569884	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.01167801551652	2.9013449633325
Merged-chr1-161550851-3	4.58215504320749	0	1.32950605794856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60895590-4	8.49780747931427	-0.409648501365794	0.664397169778619	-0.61657171342601	0.537517256864058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08475115079927	2.13732213527118
Merged-chr7-66137773-1	1.4748545190247	0	1.45530070142803	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99278454-1	1.82395029701747	0	1.43338896472067	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40671394-1	5.95036692702486	1.67372258799132	0.781634761386334	2.14131032890957	0.0322490207331628	0.270936552947963	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26763533652881	3.06279728427368
Merged-chr3-123481814-1	1.87179449066698	0	1.45092944540122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64291044-3	3.68912503603303	0	1.34631611416745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131447150-1	1.72960814510015	0	1.42609244331737	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72217016-1	1.72620137513707	0	1.41386358073654	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52372966-2	2.92707323940751	0	1.36176570769811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142606211-1	2.44246555555113	0	1.33637666624613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51719611-2	3.44293116580669	0	1.33897946906535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12772735-1	1.57315183913114	0	1.49151502671436	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133191068-1	3.48250286339258	-0.220469034883509	0.866336461094084	-0.254484308100206	0.799121425463344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68038473640801	1.81534621159246
Merged-chr3-52990240-1	2.92661051090294	0	1.40655555008984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89395886-1	7.41498231414098	-0.719595088159267	0.686270243660586	-1.04855936099011	0.294380968096309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.096469581123	1.63767395945907
Merged-chr6-97877588-1	2.29673796836417	0	1.37594979853419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14237507-1	3.05223151416068	0	1.34697136931849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47248444-1	1.19636339018593	0	1.67375677205523	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135724372-3	3.73382892283735	0	1.35779092042078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20085431-1	2.32649351348909	0	1.38919897926834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88009407-1	3.78984822099318	3.01074937061576	1.12564847459235	2.67467991879622	0.00748006277858716	0.0882774394671404	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	1.0995156753045
Merged-chr6-115698876-1	3.03705373757638	0	1.36000031206036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63308785-1	2.79529007384963	0	1.4505778401435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-119871977-2	3.19345533234867	0	1.32797731973613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15802160-1	1.93529569510041	0	1.53567576240079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97759500-2	3.17334505631007	1.9589002610426	1.22548293943523	1.59847207823667	0.109937954638921	0.666296195866718	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.73596151290311
Merged-chr12-32460504-1	1.65581989829513	0	1.52381642380277	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64326464-4	7.08285427456225	0	1.3331533857917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7041179-2	4.29542624931878	0	1.33351010314164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-42959172-3	7.25602898780077	0.669635144430806	0.542853089293806	1.23354763496314	0.217371516070326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45821199910417	4.15074029567055
Merged-chr6-95018131-1	4.98320251850928	0.201550266781423	0.633776959442035	0.318014506174008	0.750473933351128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9293316374853	3.04407911235788
Merged-chr17-80756251-1	2.42379803593041	0	1.33941634842363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5637487-1	1.30115118822752	0	1.45332820730156	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95719560-1	4.64849843183668	-2.16461177524682	0.849494475066346	-2.54811754376361	0.010830597141743	0.117936377407821	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53893047360429	1.23021119707292
Merged-chr9-64086747-2	3.46874190635685	0	1.32569147010753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85182850-2	7.27367515454284	0.80129790563672	0.843175744275206	0.950333202866878	0.341942973001681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87459728124713	2.03836655801536
Merged-chr9-61369041-1	4.17023967686225	0	1.31208005790623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99422491-1	2.60817818942501	0	1.37653596366519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4308995-1	2.33779134277554	0	1.39091114711942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46149963-3	4.05608108950154	0	1.37876433215345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169781986-1	1.64814406624159	0	1.41616573520555	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60973281-1	5.11447276013659	1.59837490635307	0.847363451261028	1.8862920084344	0.0592556155965908	0.419795870468944	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01848744125294	3.51862090621193
Merged-chr7-113167341-1	4.57372684672414	2.60007864463966	0.909493025219716	2.85882197283649	0.00425217346651863	0.0574630216458555	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00438675778585	3.14114930166338
Merged-chr1-123544579-1	4.97458841155197	1.50678857756558	0.543717805574756	2.77126951171441	0.00558381883654548	0.0708780547189008	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55079474084343	3.87036888594876
Merged-chr12-33168671-4	5.1446846640329	0	1.31717574656686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83253255-3	3.92204929590314	0	1.32436997340292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118600251-3	7.54365324002781	-1.27829243801425	0.654252744557818	-1.95382052065857	0.0507224465694076	0.3747748748897	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76439439740482	2.16523349939429
Merged-chr1-184169430-2	3.86697241386408	0	1.34262689603658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30767918-4	5.27157148926822	0	1.32387342147662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75667749-4	6.518676860697	0	1.32787565311533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21855496-2	7.52809458420065	2.03739606792882	0.793203217261904	2.56856757964473	0.010211979825561	0.112702589711385	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20773136368296	2.67801301452722
Merged-chr4-99152781-2	7.68907505902825	-1.94140051695154	0.755458988676576	-2.5698291317607	0.0101748686926443	0.112406926388763	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05439290242252	1.42436654726916
Merged-chr3-142589048-2	4.69061631067778	0	1.35404941279114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72161312-2	3.78627310799431	0	1.33405479555666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25058893-2	3.1238327366627	2.15423358653384	1.16435818422914	1.85014681539774	0.0642923919983464	0.44610034814563	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.34574950999398
Merged-chrX-142718116-2	4.3206638039562	0	1.35225164614012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116817856-4	6.05184892053358	0	1.31134623207738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26907314-3	4.92533460549277	0	1.31286182783077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60382604-6	18.6418577369875	-1.10198322671703	0.427280538904559	-2.57906252772999	0.00990688525980835	0.110116571557652	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.0332493922777	3.94109852586247
Merged-chr2-76366235-2	4.8713057644645	-3.61226791574995	1.14385557923144	-3.15797551835786	0.00158868899149875	0.0271179761799185	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49019575968952	0.420961122473315
Merged-chr8-47947808-1	3.51874688326616	0	1.34458409825097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73487761-1	2.44851909707666	0	1.37046941092033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137826578-3	4.0124664558144	0	1.32943405259233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77542119-2	5.97876396364427	-0.537822055763968	0.809180821073675	-0.664650028469965	0.506274362801262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33422236638502	1.95563186934823
Merged-chr8-108918559-2	3.69974862514089	0	1.37445597626961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136087022-2	4.80788199597069	0	1.31200355729091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64784984-4	5.87800023572967	0	1.30111702857141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118977883-2	3.2573616894036	0	1.43776792057477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76474649-7	13.9938923413376	0.971266270377983	0.460868834734236	2.10746788929235	0.0350770422554369	0.287452270281387	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41617330038371	4.31396691912144
Merged-chr4-44065884-3	4.62628814639884	0	1.3001399966949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131433729-3	9.26650795831118	-0.460141418820956	0.511812055524689	-0.899043728755544	0.368629369015465	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63607096780185	2.68443244860422
Merged-chr8-127837033-3	7.85660689428877	-2.88024199552826	0.976799144009467	-2.94865327554008	0.00319161828240209	0.0464808309074765	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04182633324321	0.469435083901436
Merged-chr7-67380348-3	5.03066609322738	0	1.3022255857122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116416731-5	11.7895563595584	-1.14905321520651	0.534091569604614	-2.15141612524824	0.0314433695469414	0.265600962087576	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01602312273259	2.88753781266324
Merged-chr15-64447416-2	4.27404871911385	0	1.3383294756187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77610425-2	3.58905728775444	0	1.32644954191691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83011808-4	5.57621969662817	0	1.30350009454902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-116237744-2	4.43405611412427	0	1.31289120880849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167013120-4	6.79813874160077	0	1.32413240229097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110236347-3	4.70121046794021	0	1.30398642125831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79807891-3	4.74650823965226	0	1.32789425715626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58233933-1	2.60409150037428	0	1.44467899480567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-142689025-2	2.29651766008814	0	1.37190325639545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95191888-2	3.01185364517507	0	1.36811895979469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134041935-1	5.82306225662742	-1.3045012027485	0.788013050016712	-1.65543096363802	0.0978371094479344	0.610451995988229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79507939298825	1.35032549026822
Merged-chr1-87281798-1	2.58603059847	0	1.32517654791138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105881974-2	3.38950456903905	0	1.3636947550338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14190824-2	2.68749259758837	0	1.38180195329596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180225330-2	1.70914147107761	0	1.59140730919334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122957573-2	3.83273317643964	0	1.3171835628701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63606109-2	3.8224468842652	0	1.36650358873796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-168455487-2	3.32522950959495	0	1.33089029750313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6509049-1	1.93151821384959	0	1.4808567136538	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103799849-2	2.20225479362552	0	1.4380270959845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119166183-4	6.56677880500787	-0.548039258950844	0.70659337935453	-0.775607690311895	0.437980658285974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58357866142559	2.09197273807469
Merged-chr19-17126135-2	6.20216128763417	-0.730727384674158	0.795471453077206	-0.918609186850651	0.358300025027957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37930908621732	1.85139442775557
Merged-chr7-65714512-2	2.49522292666472	0	1.47115350878625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67346059-2	4.09999233204891	0	1.35738231230321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37544571-2	3.82489769069529	0	1.33498940611939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56949139-2	2.45463712193345	0	1.35436804976005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67397473-2	8.91972361370965	-0.59150842848757	0.542703226440672	-1.08992981738286	0.275744060797047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98977146185011	3.31372888123416
Merged-chr14-32482289-3	4.05489898377359	0	1.31579915777876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16104207-4	11.2835454932919	3.38227392760145	1.0106735766072	3.34655422471381	0.000818226746831988	0.0162591383537102	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.96491903277391
Merged-chr14-60988360-3	4.01732070779752	0	1.32471327666744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30125199-2	4.31042221851492	0	1.33057435855623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33875973-2	3.45477779358856	0	1.33438432513569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94982331-2	9.10789728083932	-1.40855519286424	0.696248782078424	-2.02306306182605	0.0430666462581543	0.33312417925963	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14432675917124	2.41316001406225
Merged-chr13-11904826-2	2.9697378620992	0	1.33949689598018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130841200-2	4.54879352615154	0	1.33082451922332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43827093-2	5.39442374562823	-0.276663984822867	0.540322338552748	-0.512035067000766	0.60862646751081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70764428241282	3.30403190892704
Merged-chr1-125447853-2	3.68701359438979	0	1.35159558980756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80918025-3	3.66522423377298	0	1.32474707138564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9897243-3	10.1873762683439	0.707543539832917	0.715282787579708	0.989180156602149	0.322575005274788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68459078657161	2.40120643282281
Merged-chr12-25367706-3	9.73827608169035	-2.52338109077475	0.93690152896286	-2.69332583283124	0.00707430957140272	0.0846662698265352	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78818962797332	0.73596151290311
Merged-chr17-48118764-4	7.83849580130492	0.954503155198191	0.614237831062777	1.55396347624287	0.120193128982182	0.71138515795818	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27535704319415	3.71297889537955
Merged-chr15-6080940-2	4.4566213905245	0	1.34105285510601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145123676-1	1.78168185615737	0	1.76615569232498	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105554092-1	3.7782127590405	-0.239836910459212	0.902896405109631	-0.26563059626989	0.790523719454756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01374695240512	2.22816961775725
Merged-chr4-59009892-1	3.74907380008255	0	1.31993069897182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43806865-1	1.89984585391394	0	1.43618156929867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65490004-6	11.4432533166695	-0.528291655741464	0.431214250924834	-1.22512568777221	0.220527867987772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24431836937433	3.6650179427205
Merged-chr7-101296862-4	6.21976070136597	0	1.29234475042544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136137747-2	3.98448218536968	0	1.34525392048463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77141803-5	13.6187966137877	-0.883690443294459	0.40518551141875	-2.18095272015091	0.0291869136866143	0.250920676459084	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.58417573200429	3.37672894932799
Merged-chr15-59156509-3	5.57061537373944	0	1.33814007236386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47541744-6	17.7713331271509	0.728768384956342	0.436719061030393	1.66873500606291	0.0951699083302018	0.597278195617059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99093493877367	4.72742451115054
Merged-chr3-116327464-5	11.0201051294172	1.19433518634122	0.429678037797699	2.77960491642242	0.00544250693191424	0.0695980543978215	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61183512389229	4.13536836139706
Merged-chr8-11174050-2	3.37191858250352	0	1.31820083337297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45205940-4	9.21126369172796	-0.886934728984153	0.749547628349124	-1.18329335647105	0.236692904847473	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54735934009792	2.86395361846286
Merged-chrX-23554710-2	3.09642654849659	0	1.34617688131312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120683759-2	4.32222403113571	0	1.32733149756895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-3004667-1	3.08240906542698	0	1.37094249737278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82838632-3	6.12790303264671	-2.32474623255067	0.789574474496684	-2.94430266889338	0.00323683283786826	0.046950960848688	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81953775660486	1.26501898168246
Merged-chr17-67246710-6	13.3558153110418	0.499715719065402	0.521269077696823	0.958652144250236	0.33773401434096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94800682335153	3.30855146344708
Merged-chr1-138822452-3	5.04640373503138	0	1.31331878200596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34257137-3	3.85829041400324	0	1.33302767799991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68244640-4	6.21427125716389	0	1.30267180316426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52564473-2	4.47098506457092	0	1.36294622375587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96790535-2	2.45364926213543	2.73090146284967	1.28893350267176	2.11872952110324	0.0341133319834719	0.281959245103966	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.00443616959195
Merged-chr1-162039359-2	6.72616901947059	-2.34485371649658	0.647021819301562	-3.62407208929642	0.000290000716850133	0.00727741430233825	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.26551887652572	1.41926493179619
Merged-chr6-49008142-5	11.736674713439	-0.410060633966811	0.41552171898804	-0.986857281408711	0.323712608793695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02981077071727	3.50964703073345
Merged-chr1-133134484-3	5.87690789207956	0	1.30275063070297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21011303-3	4.70628284910759	-0.416087826308952	1.34313114230451	-0.309789426515001	0.756721092758613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chrX-96147900-3	5.40900564399563	0	1.33039595071787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90487662-3	4.44940742953199	1.74389018608934	1.15458668595957	1.51040212683554	0.130940846270627	0.75413895120751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.989878296978726
Merged-chr18-67825457-2	3.01184298941943	0	1.35980484593389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126869832-3	4.14275285502763	0	1.3111867402434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8251737-2	4.45128338847885	0	1.31805777714429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124011533-11	32.9348370985663	1.17737172929592	0.382016681434347	3.08199035936146	0.00205621496780803	0.0330781137517824	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56028058733779	5.80022342554482
Merged-chr10-44068816-1	2.12861064405543	0	1.43426665352994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144936874-2	8.29511849371284	1.69552650329146	0.614949592653729	2.75717965105831	0.00583023098298397	0.0731673274081181	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42993423486656	4.31802764184134
Merged-chr12-35298911-1	3.02496808815821	0.101803489955231	1.33973845096623	0.0759875853990827	0.939428975056967	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr8-46365363-1	1.1251153320691	0	2.43324995519856	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27886661-1	1.27731531749898	0	2.30196596652045	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105285424-1	2.29125555813852	0	1.40439929199839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25481425-1	7.64453339442619	0	1.32455260746825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-14004371-2	2.14335845222663	0	1.5526489536803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154881500-1	3.72564008040504	1.48808681119191	0.818592622941465	1.81786003133614	0.0690855285322252	0.470697836249274	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72802143312316	3.48762807179304
Merged-chr11-74483510-1	1.36150149553137	0	1.56381136994628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5682194-2	4.56474906289633	1.64312861234783	0.747704869704839	2.1975630745811	0.0279802570317642	0.242847373621684	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18896396182328	2.26087918380575
Merged-chr8-95420610-1	2.29420210262004	0	1.34598041140677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63612930-1	3.40696977922371	-3.91687353351424	1.19113335636367	-3.28835853062817	0.00100773416221351	0.0191317247425927	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73929316218077	0
Merged-chr4-129129585-1	2.56754015669352	0	1.37409641545737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7053617-1	2.39707171823434	0	1.4019954590986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35292674-1	2.29346796759973	-1.62221477996935	1.34484466201602	-1.20624695608899	0.227722283544332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.873092966476886	0
Merged-chr17-4736901-1	1.85303589789386	0	1.4165128691193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143532281-1	1.9380285979758	0	1.3596441118569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82380684-2	3.38696092599091	-1.89773431552205	1.19368276160951	-1.58981462793618	0.111876595619856	0.67491580662621	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87792908264282	0.683637474991079
Merged-chr11-3178443-1	1.70460157944897	0	2.42173000296758	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24698635-1	1.55092466412613	0	1.4773461692963	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17514469-1	3.35332319952666	2.79119959492932	1.23972007185901	2.25147568252549	0.024355425387248	0.218391979966303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.16448544747254
Merged-chr16-38305147-1	1.60642036690382	0	1.52531116405266	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-74013925-1	2.58210013258533	0	1.3368400137518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-45410950-1	1.66585029593589	0	1.44581396722465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5633200-2	2.93185901365553	0	1.34755603028004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62349130-1	2.73269190682915	0	1.4020971291579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16160891-1	2.39235420650175	0	1.33406549794465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72201027-1	1.99883659263479	0	1.43752561199857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25137752-1	5.35083742877698	1.42748697143401	0.850983043535615	1.67745642204946	0.0934532641551772	0.589345396591798	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752351597074039	1.57664565284388
Merged-chr4-89276538-1	7.48616570587183	0.0855345964635996	0.627127827685111	0.136391007841782	0.891512181953856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34710726054342	2.22221276223304
Merged-chr2-145877589-1	2.49435412112504	-3.61033355068299	1.29729334835689	-2.78297391662089	0.00538631362106104	0.0689874656765689	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95440511696185	0
Merged-chr6-43462938-1	1.82387786644841	0	1.49255094598687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142295469-2	7.80986734583928	1.44305191239479	0.639773692040019	2.25556619527976	0.0240978123022781	0.216691295266914	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98880444948182	3.52648357102452
Merged-chr19-10692518-1	1.97611487084023	0	1.53999339245126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41494859-2	4.20191493020919	0	1.37098576139256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124349093-1	2.65433475180803	2.09729883435773	1.3131224869331	1.59718446316165	0.110224594953516	0.667414416404045	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.781596303653021	1.78348390616087
Merged-chr19-22304553-1	2.31010459472659	0	1.34290356226944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89485338-3	7.58238837928822	0.751479869746017	0.764867460600495	0.982496848742961	0.325855134671461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78335507678903	3.09608820392312
Merged-chr13-54956175-1	5.1612138264548	-0.921976167552301	1.0394617805404	-0.886974571660516	0.375092590949566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34027799431121	0.581381506691384
Merged-chr8-10854955-1	1.74965438401872	0	1.40880242751082	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156803421-3	4.81634469877788	1.8633491845425	1.35518753015829	1.37497515515425	0.169139147345887	0.90291370986556	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr12-73683318-2	2.62644110339644	0	1.40760015997868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50436069-3	5.22820206292762	-3.42869609710778	1.31073253252984	-2.61586251352904	0.00890023870698862	0.101358487024552	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11931931467584	0
Merged-chr5-114781077-6	10.0279917701172	-2.21638726358489	0.664575062787704	-3.3350442827147	0.000852858167089591	0.0167914642321893	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97434570538555	1.40000983364339
Merged-chr12-16874327-7	15.8944872073913	-0.175601650082415	0.398199455439494	-0.440989176865154	0.659220832428781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.56056049246362	4.46190602780287
Merged-chr10-60333856-2	5.03408289343897	0	1.40455393322648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37618262-2	4.21265724775095	2.22103763196865	1.04177971038024	2.1319647616846	0.0330097435361871	0.275767668258205	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	1.47158896970822
Merged-chr10-12884781-5	12.5035705091226	1.15832630888031	0.450506118913624	2.57116665068515	0.010135654019615	0.112089457846638	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07704307617294	4.22459940150703
Merged-chr11-76771439-3	4.7902215016143	0	1.33651321452735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134005128-2	3.19588230849117	-0.907961878135187	1.43021120287294	-0.634844613376902	0.525529763169851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	0
Merged-chr7-139236034-2	7.60420437660029	0.931978490683134	0.691521452078611	1.34772173427411	0.177747898902485	0.935721759581228	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8311359786438	2.700856479496
Merged-chr17-27615889-2	9.41170745948016	-0.703055817932654	0.59683965325562	-1.17796432274171	0.238810829809084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18867135977086	2.31790783580067
Merged-chr15-18823615-3	4.45277925215423	0	1.31251430508679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71012245-5	7.83008784271578	-1.37691534586728	0.703643390518718	-1.95683689269394	0.0503666480487147	0.372774854951825	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40062832881443	1.47711801254374
Merged-chr10-89708962-2	9.0602543245379	1.32171240947556	0.655600673727308	2.01603271998058	0.0437965544457544	0.33765097296039	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77173212963364	2.69894930911201
Merged-chr12-102338400-1	5.32669356579137	-0.700099044002929	0.649263442700298	-1.07829734120129	0.280901083237205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6944110191955	2.50794861036089
Merged-chr2-163838270-6	10.1925850599128	-1.43321260466986	0.713148784114256	-2.00969648493468	0.0444633222248143	0.341181180093351	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37762516219067	1.42690496303314
Merged-chr4-136878823-3	8.73446002182185	-0.0802657079228312	0.517918894740366	-0.154977369503132	0.876839158254433	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28452896437526	3.43335120402952
Merged-chr4-86925210-4	12.1217067519737	-0.0580554473470167	0.447483305082798	-0.129737683367371	0.896773967498191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42959227677865	4.31507696902589
Merged-chr6-5365962-2	2.68201165382699	0	1.39520597267242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95596993-2	2.72658949001261	0	1.3712653877161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126903669-2	5.41478477833079	-0.971426249416463	0.756328077843969	-1.2843979720886	0.199002742159689	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03449398695475	2.31260716574699
Merged-chr10-30755267-3	8.95964378809998	0	1.30025078477718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95884208-4	14.4527983002762	1.45862227876406	0.499661407893339	2.91922140818094	0.00350906892273329	0.0497334077702466	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79157722015468	5.15311204424778
Merged-chr15-73350523-2	4.04359952294178	0	1.32901326808407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99491206-1	3.40496609155111	0	1.3694116480736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14295577-3	5.0524262858609	0	1.33223993498989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124012881-3	4.80918942837221	0	1.31348149105725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52220149-1	3.60862841047836	-1.94372021448355	0.944275546560628	-2.05842481208291	0.0395493719646982	0.313942001256745	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23328379703439	1.26501898168246
Merged-chr3-96500173-2	10.2630095359286	0.159006393002556	0.538511303928854	0.295270297656674	0.76778740456032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86789586586461	3.1143152953673
Merged-chr13-59002394-4	6.56656427634603	0.770874211504143	0.748499555076505	1.02989267832678	0.303060388108955	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26009750263758	1.89255009218154
Merged-chr19-11786795-2	5.29223818136478	-0.602769027632656	0.72562555409439	-0.830688809443786	0.406149449733049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1702619668656	1.775524153257
Merged-chr13-20039821-2	5.71837376520495	1.50736484313066	0.68439331142971	2.20248330595421	0.0276311870798453	0.24059495312675	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30666802198158	3.11413112565287
Merged-chr4-8974961-2	7.31062978491977	-0.867890383627625	0.619800855254332	-1.40027296876106	0.161431592244064	0.873398644376605	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00489353654642	2.6702610769639
Merged-chr3-101897094-2	6.05805031433321	0.39844638151588	0.726229093858263	0.548651086668863	0.583244919661743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50669743979603	3.18824411835354
Merged-chr5-25166837-3	4.53509340570077	0	1.33084157760888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53405190-3	6.00073079605945	0	1.31145764043332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135095334-1	2.35963696002667	0	1.37670865576469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88951492-1	4.39209457952359	-0.298118754788715	1.02358529966368	-0.291249546947056	0.770860471203364	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57661293723349	1.15307255889252
Merged-chr2-84560731-2	3.47877834365593	0	1.35919742453889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25621520-1	2.03935945633638	0	1.38532795127378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106658571-1	2.18700424852897	0	1.37817561264945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127480025-1	2.6233431258056	0	1.34946791333207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111220737-4	4.15564230859167	0	1.32092955770303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26699272-1	9.88397864946745	1.22874922143351	0.581670786465512	2.1124478829338	0.0346480516727114	0.28497313840214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1505771251881	4.22113040178686
Merged-chr3-132747229-2	3.42885396800782	0	1.35718174369067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50674514-3	4.3200113949851	0	1.31911911367875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101541303-3	4.69302762197159	0	1.34137691527613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124536916-2	5.09460901768394	0	1.29831899885423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128466814-6	16.9248061414286	-0.865126248412097	0.576937850273564	-1.49951376565411	0.133740400282311	0.764828049410161	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65634875940851	2.70938678277374
Merged-chr6-106458887-2	4.66021133748688	-1.11435036532395	0.687427317271039	-1.62104463603181	0.105008066207661	0.644366334341796	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05606636867835	1.78481374055866
Merged-chr1-106328089-2	3.46536067445872	0	1.31368112752594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16101581-3	6.1078282964681	0	1.36497977430832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77716273-4	13.3762188804537	-2.17426904919699	0.680810418541384	-3.19364831968245	0.00140487148369726	0.0246781537563659	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87204469717095	0.843323834477631
Merged-chr7-17066566-4	7.56272709510288	-1.20665370864884	0.838408917828911	-1.43921859964648	0.150088597204381	0.829402915257293	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3428768504801	1.34574950999398
Merged-chr11-70633000-3	4.09238432969146	0	1.3145800779626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81132859-3	5.26490328961227	0	1.35180543551031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64222811-3	7.37019344340201	0.351821345199382	0.72755138604045	0.483569067353576	0.62869173194382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63279037437286	1.87744667331019
Merged-chr4-136364113-3	10.5512962085753	-1.18572024877502	0.620330724920944	-1.91143240394248	0.0559490358019193	0.40287004887187	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.63854390069575	3.46935039169561
Merged-chr12-30265282-5	8.46275170930175	0.243158022079914	0.604555591667865	0.40220953280588	0.687529827141096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55810859760451	3.67984507500062
Merged-chr6-131805061-1	6.71775816910124	2.95745166074698	0.727358927639144	4.06601410715649	4.7824042116366e-05	0.00175469391136219	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53970804602199	4.63769527841779
Merged-chr3-138114382-2	3.22611867668106	-2.78268406191909	1.06719650478687	-2.60747111655396	0.00912137655181911	0.10330077507022	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40168908842311	0.683637474991079
Merged-chr8-72269031-2	10.8355121675934	0.755792422659773	0.456005524064768	1.65741944510397	0.0974347027555634	0.608464075522271	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77777181043892	4.38131406170376
Merged-chr10-24382093-2	6.94839953863624	-0.859059453693416	0.566632512871423	-1.51607864741138	0.129499466808373	0.748079221893557	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69075655184692	2.39582461268914
Merged-chr1-77213780-2	5.61664668689113	0	1.31793052667637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64098646-2	5.48118069620976	0.842818528986148	0.799790467022877	1.05379916832897	0.291974874364099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53906720682192	1.8133278414847
Merged-chr5-20934796-4	4.80425905668032	0	1.31900796659908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43348777-2	3.42041391999371	0	1.3404857539299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71661624-3	6.11696631704891	0.363128556121419	0.60185250299538	0.603351409712766	0.546274939485879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82734007749828	3.1459315008481
Merged-chr15-97945519-3	5.47634602617504	0	1.31672659828438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17364949-4	11.9416272311744	0.00911584782084154	0.346650398452676	0.0262969489189438	0.979020488481147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.51509033829574	4.54877365001676
Merged-chr6-15739339-2	4.34155346274552	0	1.3154621948706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127538486-1	4.65623644032017	0	1.37013330863697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34490323-3	4.34299325521342	0	1.33609030556343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-133947585-2	3.36341935733033	0	1.32760368471793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89005861-3	8.73261463585757	-0.465259917360675	0.624578678580485	-0.744918027650411	0.45632127614802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58617642475637	2.66828971316851
Merged-chr18-62250687-3	4.82788070601051	0	1.35362297077105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100336118-4	6.13310641628258	0	1.30747024876063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21439598-1	1.68724157109926	0	1.48764744257078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20531871-1	2.97273072887087	0	1.338447235959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3231798-1	2.88913336934224	0	1.34094341332029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-11411541-1	3.38645706819476	2.53914753525539	1.0107248533552	2.51220451028432	0.0119979536091589	0.127331847043447	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.839090082839484	3.42491520061759
Merged-chr11-105467400-1	2.78210308331856	0	1.34184327196172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117146842-2	3.94080888426066	0	1.32564927951138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155050239-1	8.1169887829924	1.05829397955707	0.45426867306239	2.32966533312263	0.0198238461549271	0.185991706850624	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31234093002288	4.21984608400296
Merged-chr16-38404404-1	2.13310746672148	0	1.40207446277641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167380591-1	1.87640854788321	0	1.38988274000606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71326999-1	2.34609491427343	0	1.4302045128044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105849019-1	1.58028389592003	0	1.52409572269048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8763732-1	4.27169233829596	-0.918652474487245	1.16709293316684	-0.787128812437012	0.431206464383904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48665686471173	0.733321818366247
Merged-chr12-91816215-1	2.87926727868727	0	1.33098183076314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95884953-2	4.37783902776778	0	1.3763394575343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68233134-1	7.93266070812276	0.56060127124605	0.60516572740589	0.926359914083584	0.354258968894894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09255188244283	3.67799089413632
Merged-chr6-127542241-1	2.41017837332487	0	1.38149421445265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43303344-2	4.20373572992503	0	1.32643664229921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77089389-1	2.01858931276894	0	1.49052285557513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99986937-1	2.84326066158182	0	1.3693400375168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151051355-3	4.73645592271259	0	1.33588736569319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70867496-1	3.16713159339744	3.43060156117866	1.09713804182082	3.126864104981	0.0017668157473352	0.0294827226316052	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	3.22905223993991
Merged-chr3-22087934-1	3.03117400074551	0	1.37642779401383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66287746-1	1.25221171526374	0	1.63240724728636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46462384-2	2.7181748317514	0	1.35453849547438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72177114-1	1.92453225112321	0	1.40701734650359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27702601-1	4.17259452596823	0	1.32144618177419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131913412-1	1.300716576126	0	1.53152995760876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72872435-1	1.32415792222276	0	1.54971698431617	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41852169-1	1.96794981525556	0	1.45606943511737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-18871845-1	2.51901028312117	3.10450022409671	1.1480707252725	2.70410189525549	0.00684892834716247	0.0828182960350998	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	1.91272544031057
Merged-chr15-76759330-1	4.28712328026978	-2.60645626582789	1.08107882306476	-2.41097708161448	0.0159098481564946	0.156668469744751	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24124448365264	0.803125334851723
Merged-chr15-27925523-1	2.28851005202087	0	1.39217721067574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49108257-2	2.97976472827695	0	1.4075246706925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48833844-4	6.91950045854013	0	1.29609930587495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35252515-2	7.29328228001939	-2.16162777058643	0.918711776616335	-2.35289002014083	0.0186281428018316	0.177367713759068	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83648088246677	0.733321818366247
Merged-chr2-50652250-3	3.87278189544855	0	1.3166186387728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33122860-4	5.53686811683214	0	1.30493495424359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40689374-4	5.04168120306382	0	1.30154083544322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64718969-4	8.95535321947371	-0.480453184998583	0.641028610774188	-0.749503496292196	0.453553792127986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12229477616709	2.29675716151532
Merged-chr18-60753019-3	7.60055563997972	2.03647150839655	0.744205523467893	2.73643697094168	0.00621084916493005	0.0769683575823097	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860868482386745	2.94640134381309
Merged-chr5-146768961-4	5.34142822530877	0	1.31074896020477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4710267-2	4.55493461815771	0	1.32843308847137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156571647-2	6.00393149575384	1.80804008638702	0.83635804476904	2.16180151275559	0.0306334788428673	0.260851616948919	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	2.83635135426376
Merged-chrX-93911392-2	9.75525063331373	0.506324190193584	0.446602124011085	1.13372544144241	0.256909734314383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5065977444532	3.82999919083869
Merged-chr7-118646482-2	5.85191255450567	2.03048811920063	1.01025252209688	2.00988176202337	0.0444437044708158	0.341070852889011	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	1.68598010415578
Merged-chr6-120451664-3	5.14838915761805	0	1.32650467307831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-18948874-1	2.20663144120016	0	1.39738096524195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76414560-1	2.15083658589479	-3.6233852929837	1.2731691089743	-2.84595759309836	0.00442780910743846	0.0592180953611694	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10000267475363	0.306240821987646
Merged-chr14-51483242-1	2.74042561511999	-1.51483015155671	1.26549934929972	-1.19702167558992	0.231298106342142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	0
Merged-chr16-3733401-3	4.26710811158291	0	1.31290001981514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125872542-1	5.63244753069148	0.955730614400013	0.851636443574885	1.12222841285206	0.261765334866071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.965429723541064	1.52242786274935
Merged-chr1-64633322-1	2.43492112236748	0	1.3587928720261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96503244-1	4.11055295594253	-0.540198108682918	0.96713737378524	-0.558553648452916	0.576466381198922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44070865769581	1.41555302647945
Merged-chr2-104338163-1	1.97853596880919	0	1.40017614116712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125495993-2	4.54388295702895	0.48167365312427	1.0229677043274	0.470859100523578	0.637741356612234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917336671752516	1.17347279658369
Merged-chr7-4145983-2	3.69499132365165	0	1.34674493178843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81202628-4	12.6005273760322	-0.980902648748261	0.505353283817209	-1.94102359707444	0.0522554152360637	0.382683219098489	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93300862073904	3.08388963161166
Merged-chr18-66477531-3	4.37365879660532	0	1.33037755080592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9555970-2	4.68751505887917	0	1.32664354072958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11060136-4	4.52694849996216	0	1.31178991937932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95853091-4	5.04850076163098	0	1.29976189869653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54979325-1	2.98771940276598	0	1.32160572271772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114896700-1	2.63646680129013	0	1.3941146330081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11104955-1	2.29903329322423	0	1.41160192338377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134699173-2	2.94970347155251	0	1.36518494768609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107621685-1	3.10361329701483	-0.772046816958754	0.883457675447228	-0.873892251338385	0.382176934907284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96635692930931	1.85139442775557
Merged-chr17-64666121-1	1.85112781568138	0	1.39847033941153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4270981-2	3.3887450966876	0	1.32536870161674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-29289107-2	5.7940081362118	0.67103951301467	0.622173950418684	1.07854003299737	0.280792826291884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12424028345173	3.04845038512503
Merged-chr7-25435631-1	3.19389435576462	0	1.3252349746365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108127867-2	5.24063031904669	1.91828090238779	0.894529191161953	2.14445869552455	0.0319961515792031	0.269331511154787	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.721334244049718	2.24553328998514
Merged-chr18-52457904-2	4.9436461117456	-0.523991959613289	0.803345444335326	-0.652262315431228	0.514231966071224	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06932047059804	1.62635771927786
Merged-chr13-115150809-2	7.22949812991336	0.906914520305744	0.572707257415388	1.58355688453927	0.113294592062439	0.680892891834099	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33562375405282	3.29398433573242
Merged-chr6-5379256-3	5.53490585460397	0	1.31927132439284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100916937-6	14.6583575271693	1.2271709118959	0.419702596436922	2.923905933187	0.00345669188940105	0.0492437297154569	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49486250163805	4.63338437051633
Merged-chr14-61173411-3	9.23536077402562	-0.631876280782195	0.654671293976928	-0.965180979516819	0.334454172049095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60124684270622	2.15258675016244
Merged-chr6-37592545-3	5.1114442188888	0	1.30552657275221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33348195-3	4.13762576784364	0	1.30743460350172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46592218-3	11.3978933810265	0.172600125103079	0.630306654904625	0.27383516223416	0.784211300486723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68451413174065	2.77469492713894
Merged-chr11-32629950-4	7.93143381614352	-0.926841369377186	0.653901593329023	-1.41740191312063	0.156365453673563	0.853764784070242	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03520839490977	2.02938698498506
Merged-chr5-33033420-3	4.41236078021142	0	1.36029392025455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138038557-4	10.1371367150839	-0.400577709857907	0.592329398911407	-0.676275245824528	0.498865906270819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26468343553208	2.43227213747251
Merged-chr6-50681869-1	3.43623790814281	0	1.34814242740731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15563416-1	2.93009246863921	-1.9896676015837	1.00249666151379	-1.98471244640282	0.0471764732554385	0.355647070893158	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91982121427193	1.52861812840328
Merged-chr8-40602980-1	2.79271189042884	-0.286625381719113	1.35113566779234	-0.212136640717537	0.832000435001486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0.306240821987646
Merged-chr10-122748534-3	4.19222099096522	0	1.34266507202658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47738933-4	6.22138974845857	3.63802787154951	1.08219679541142	3.36170637999942	0.000774624454713426	0.0155462560250932	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.69453213775868
Merged-chr15-83452119-1	2.19589515407175	0	1.33889254124589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37063938-7	16.9999639604967	1.45650145622443	0.415191743535606	3.50802124295983	0.00045145299944819	0.0101831714538976	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54175908498358	4.79980727895914
Merged-chr13-24442499-4	5.83216416924717	0	1.32013718792652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80305107-3	3.81093987168592	0	1.3210324531573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109563029-4	7.81313846484793	0.676586396559335	0.873552263621423	0.774523087782359	0.43862152039533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34855128611055	1.94890237030247
Merged-chr3-122104593-2	4.46540133463899	0	1.34247602133698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143907632-2	6.215015403333	2.44631843747327	0.74417123715504	3.28730581798018	0.00101150921544298	0.0191777983904471	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.864507874037491	3.14523635789572
Merged-chr10-41826708-4	4.54432822659914	0	1.30396382663494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30744612-3	4.12008446631618	0	1.32553652063237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146564516-2	4.24560339994793	0	1.33530645988698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109547922-2	3.04897385792005	0	1.35247929900973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79323341-2	3.52705930507453	0	1.3558169258448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39265281-2	4.05245052371013	0	1.35219123945343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149943854-3	5.80328799240713	0	1.31864233063401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137730276-5	11.8483605596837	-1.4448105441493	0.567640429271231	-2.54529182497489	0.0109186446158438	0.118717096683349	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7106037452113	2.21307952544685
Merged-chr9-114394915-3	6.42931191762889	0.350415871874596	1.03425978594945	0.338808369652421	0.734754095748068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752776503073505	1.15637648126681
Merged-chr14-118941227-2	4.57303286387995	0	1.30963740252086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113573385-1	1.85131638129871	0	1.39464486427623	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62111106-1	2.00539120095842	0	1.42550435537135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21326068-4	5.86716980927564	0	1.30319383575022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-95324447-1	2.42353925782086	2.75409631791227	2.04539993745054	1.3464830361465	0.178146787626693	0.937118700968772	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499615150807969	2.07721457594951
Merged-chr7-110432435-1	2.41755525317325	0	1.34833223717564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60333355-1	2.41064108680713	0	1.44745209831062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43916159-4	4.36879292749186	0	1.32018802428338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5726526-1	6.63308219957012	0	1.32562790948043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148682117-1	1.9212842336891	0	1.42062821026473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87218177-1	2.94665510614037	0	1.37611064424596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83162480-1	2.22249344033209	0	1.34191465733425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96148377-1	1.71477426427547	0	1.42509309435992	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90496448-1	1.57059837400412	0	1.52245969323308	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153565726-1	1.60149868685493	0	1.43245351071291	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46850348-1	2.10049385737931	0	1.36586337888033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19173174-2	5.45156289232037	-1.45009602603353	0.725797306708394	-1.99793525359021	0.0457236800264818	0.347304381612284	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05252990038646	1.78481374055866
Merged-chr4-106827954-1	1.87812678829152	0	1.38890311257834	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14893577-1	3.19156430357805	0	1.32593634308171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61069385-3	4.45638284139344	0	1.32389191316275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105353190-1	1.66040853282857	0	1.37157728366849	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37802877-2	2.91989138532791	0	1.39094916128931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-107032037-1	2.05584493813681	0	1.4203216998582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28557401-1	1.56764251076078	0	1.52366152902836	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118041644-1	1.0979935883598	0	1.5505068411479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102492608-2	3.64122739850302	0	1.3484526035356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64223400-2	2.59021832212448	0	1.42576065301929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132007264-1	2.96587751361895	0	1.35489871676231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64242114-1	2.36390171113295	0	1.34851933214001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43469277-1	4.64364269805263	-2.23977264529092	0.904420720000965	-2.47647206190558	0.0132688009319424	0.136991890859059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28128717900775	0.989878296978726
Merged-chr8-67989412-2	2.15529609944166	0	1.66358620564501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67078456-1	2.66927144528399	-2.41192269316465	1.0534428889702	-2.28956189122169	0.0220467262607229	0.202312227809745	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52587175796782	0.735627456805112
Merged-chr10-60375700-1	1.96940818911759	0	1.38943695732678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73459385-3	5.43404115720201	0	1.2975106847071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105857893-1	6.26882514538205	0.132227569901728	0.663189921210173	0.19938115111949	0.841964603710763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31936972654524	3.43526289253616
Merged-chr12-35890277-1	4.73065423069657	-0.310740612169026	0.874741073212879	-0.355237248695425	0.722411861691063	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53740946154863	1.41959898789419
Merged-chr1-171961017-1	3.53368338606484	-0.537304016497251	1.2998298824222	-0.413364874714221	0.679339305397107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04196875399245	0.961728545204858
Merged-chr10-117818283-2	2.89361043965806	0	1.37645066458616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53447689-1	1.67537763453543	0	1.45248308382085	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156030047-3	7.50419994240342	-0.295043090198746	0.698926772061037	-0.422137342555509	0.672924772580695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55717293835302	2.6670833183559
Merged-chrX-169263591-1	1.59513838236251	0	1.46805232862147	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65038445-1	4.08210278332126	-1.52631355429092	0.946207129522408	-1.61308608513795	0.106725806517634	0.652212153062876	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09947090054909	1.08186277552917
Merged-chr6-38810635-1	2.34084435748589	0	1.52755871979628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108768710-1	1.19809470211462	0	1.64124388729004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48153567-2	4.25722300915749	0	1.3183915788693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54715893-5	15.1816011163297	0.989726822965734	0.515866226971642	1.91857262836503	0.0550384423959827	0.397759572750264	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0668595413417	4.93981361060229
Merged-chr14-27045242-3	4.3167485868361	0	1.32099856520149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40805462-4	7.62874042597595	0.140636020081504	0.634576361951122	0.221621901655922	0.824608231385287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87755225774916	1.162043158134
Merged-chr8-40576953-2	5.55164286080512	-2.72337847422328	0.722899259424497	-3.76730013029945	0.00016502256403606	0.00470898011768576	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02976324824658	1.20275690226768
Merged-chr4-10919229-4	6.25078565587183	3.99908716228513	1.0483295869959	3.81472316711479	0.000136335682160679	0.0040532263359744	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.87757319456894
Merged-chr10-99166161-3	5.54839066978343	0	1.31592575646574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153953951-2	3.57071080319789	0	1.33586857350908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95662926-2	4.4353448652634	0	1.33159352426569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-59078640-3	4.16541111909144	0	1.32979278607359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58534967-3	3.3183580219517	0	1.32997467127112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39655662-4	4.35659205939179	0	1.31817841480785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177463029-2	3.73319629698505	0	1.48936096691904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-64976176-4	8.75274891904876	0.330821834988242	0.584413744465109	0.566074699853322	0.571343001275591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8760535596356	3.1690188381782
Merged-chr3-10022628-3	6.94583589524691	-1.88536272860436	1.2035696056315	-1.56647585630507	0.117237256512808	0.698294208739947	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.821695057402385	0
Merged-chr4-129130317-3	4.62284619240394	0	1.30529598396803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73358823-3	4.80330275278199	0	1.32234799303701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88275685-4	11.6793597810641	0.392197435622324	0.533919385735871	0.734563018500969	0.462605667412815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78362091547737	3.47225664660216
Merged-chr17-73416543-2	3.42130435797032	0	1.3195964839165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49500989-3	3.59497978467393	0	1.41629812846663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102867094-3	3.67598105906439	0	1.3334389829001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33007823-3	3.40737046546252	0	1.39115114939142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172095712-2	8.02483821744444	-0.890422588622234	0.71492141555367	-1.24548316675148	0.212954199360246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34071240340859	2.2758534078984
Merged-chr7-127761193-2	4.67188232359332	0	1.3041032002211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92693370-2	3.6251034583645	0	1.33656808038229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80014518-2	3.60301749217322	0	1.35099334835382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-39616641-4	10.4982846185313	-1.47874976694907	0.547931696008193	-2.69878486264273	0.00695931492491896	0.0837992620767085	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.53079508878566	2.69687992955905
Merged-chr10-94572115-1	2.45018939161878	0	1.33842521367617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55044859-2	5.16863739368117	2.77262375776676	1.13172893894814	2.44990091032197	0.014289553301901	0.144612846533379	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	1.31996877971892
Merged-chr6-40423968-2	2.74683740389897	0	1.36816397055414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78797332-2	3.61110537134993	2.71544324950175	1.17579144603291	2.30945994603345	0.0209180718604027	0.194080977394558	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.11779166918352
Merged-chr11-45960170-1	6.83128659962267	-1.18691276449044	0.566901907384562	-2.09368278538052	0.0362882474283451	0.294314486341397	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8880333439137	2.65030055987329
Merged-chr2-5577866-1	3.27745932311143	3.54216911309857	1.17111957883051	3.02460071296546	0.0024896156623148	0.0384328904015174	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.75733238011489
Merged-chr17-87143317-1	2.56767154302905	2.44447176818163	1.33554067415162	1.8303237149512	0.0672015472610949	0.461373430061305	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr5-74813749-1	4.02651196299112	-2.01326362125165	0.909987518789086	-2.21240795030978	0.0269384900530586	0.23565228527539	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51789790678615	1.31470332505763
Merged-chr9-40556616-1	4.03095159567058	-3.58541098115773	1.06306428340335	-3.37271323769735	0.000744314273522922	0.0150628555334868	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02237003659881	0.423054662900563
Merged-chr14-49154019-1	6.2412087009029	1.46250790193181	0.655616445716197	2.2307370589738	0.0256985513185764	0.227301147859301	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66621566434461	3.05205408291954
Merged-chr1-131613520-3	9.86977154135691	0.821343500875849	0.509123828221333	1.61324898845391	0.106690424250385	0.6520569082553	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09957321811644	3.84964215546198
Merged-chr5-111103581-2	5.37872791429853	2.76349170341478	0.76849813688114	3.59596408994573	0.00032319238469921	0.00792172902121326	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62016864726352	4.55691192241413
Merged-chr8-109002110-1	1.78736027820821	0	1.37908804853508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118970805-2	6.56218477956351	1.81721587203466	1.0154139056676	1.78963067365116	0.073513304010388	0.493964994241826	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.26501898168246
Merged-chr3-95296253-3	4.5865581979054	0	1.30963697332968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70495108-3	9.0881393045097	1.26549201801525	0.491962451252004	2.57233456495445	0.0101015220956455	0.111842436947145	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57780112219718	3.96388315126942
Merged-chr15-74933709-4	8.30673392253322	3.05609543843084	0.961241467501595	3.17932126500334	0.00147620378313378	0.0256502391339197	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	2.24448401666942
Merged-chr12-40486647-2	4.07173738655827	0	1.3290645495174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68927163-3	7.05975713448562	-1.12278251505013	0.69411704120978	-1.61756944202555	0.105755419039867	0.64737088054839	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10512984580155	1.63476526644182
Merged-chr6-72517735-4	4.70152015931392	0	1.31742368620327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13056343-4	4.85649387765997	0	1.32478931550824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20882842-5	10.5325974631628	-0.105207474968455	0.496655744873734	-0.211831789029647	0.832238267200561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39471357171997	3.37002884585273
Merged-chr19-58087308-4	8.23762574443388	0.959780562272875	0.801634246744654	1.197279889389	0.231197480251845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98303723229301	3.92251444403217
Merged-chr17-78829636-3	6.33861176838584	1.65489014809829	0.902609910677579	1.83345000816132	0.0667356765396886	0.458946486967217	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.970635354461015	2.08137696679909
Merged-chr6-141075439-2	3.69191253618977	0	1.36116076508151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30975367-6	10.7865562086701	-0.86877425228119	0.493885075749114	-1.75906156095819	0.0785670529197764	0.518773243894804	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76195698126667	2.4707788411593
Merged-chr15-68363880-5	18.6660013749252	0.268571805080837	0.383390132032079	0.700518304050572	0.48360367821512	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83593259074558	4.06952140586314
Merged-chr11-75472840-2	4.11138060145894	0	1.3115406878791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109437528-2	6.85213377287683	1.38056593668101	0.776305893214789	1.7783787921072	0.0753416634447749	0.502785573882993	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51834274234497	2.58722329158898
Merged-chr5-135134741-3	5.73902130086789	0	1.30929303606426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81134683-2	5.15178112319469	-2.00893107567225	0.958183731967168	-2.09660319691285	0.0360287160545353	0.293156388068448	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4115360668992	1.00443616959195
Merged-chr8-127861115-3	8.75811481684951	-0.811472554077111	0.613848254436158	-1.32194324609179	0.186187050288482	0.968137104173718	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57448039056556	2.39543092688359
Merged-chr1-155982830-3	6.73249836772605	-0.55552557417537	0.84487091960903	-0.657527157441332	0.510842014730888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3803085031308	1.5122114716189
Merged-chr3-123356535-3	8.89559452845235	-0.46633366603647	0.595080595390665	-0.783647911977916	0.433246734128982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49176014073847	3.01442870895611
Merged-chr19-47169196-5	18.8729554596627	0.360150435617369	0.452397567711202	0.796092776182385	0.42597811258923	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.43174728040906	4.80831985532449
Merged-chr16-21778685-1	3.65692977718498	0	1.39291266914668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-175655422-1	3.39408232830807	-1.11657769654114	1.05819245261181	-1.05517450420783	0.291345522395922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53020103795465	1.40264952818025
Merged-chr6-43857234-1	2.20063348888115	0	1.36748698086193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91387053-1	2.84921467941752	0	1.37902030610816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85160374-3	4.78631130387024	0	1.30667358935397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122895244-2	3.68974245930441	0	1.31367129582151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57252811-2	2.81369784931147	3.66062767205637	1.18113646955854	3.09924193046427	0.00194016520229067	0.0317590268809835	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41926493179619
Merged-chr7-81847048-1	3.70032570549727	0.0230838262234078	0.957724939217039	0.0241027723912874	0.980770631917642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33490271888588	2.36155420913382
Merged-chr19-55806976-1	2.22106320919534	0	1.35591327649074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30511214-1	1.68045731426321	0	1.48531010167383	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102089710-2	1.88833256845674	0	1.54244906338101	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31413109-2	3.78518743998966	0	1.31673170194109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49899090-1	6.50252539627038	0.774273771837219	0.734040924885824	1.0548100869957	0.291512190373389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7323159258717	2.78585253285087
Merged-chr3-53027551-1	2.31967833678025	0	1.36838470520717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20926102-1	1.98169948007551	0.946935520982326	1.20846539839753	0.783585133871436	0.433283581622932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0.733321818366247
Merged-chr2-165391742-1	2.46767124946118	0	1.34893399990231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84991454-1	3.11041067190799	0	1.3209821548321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53454749-1	2.982291334858	0	1.33500456319784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54227770-3	13.092650114358	0.165202146006986	0.579034605443541	0.285306170743355	0.775409585674373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7508305641633	2.44857545836358
Merged-chr14-76909713-1	1.38661217977839	0	1.50436099818328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136808766-2	6.28333438547138	0.393089960215369	0.6547299876116	0.600384842077157	0.548249787418548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01403657894488	3.57131936519212
Merged-chr4-19580798-3	9.65810919302449	-0.709017804383975	0.500588868255263	-1.41636750104964	0.156667933943695	0.855201972390332	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84191931846467	2.67838616097772
Merged-chr7-142089034-1	1.7562126574781	0	1.52859544521294	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172513587-2	5.83490189809251	2.10840483919668	0.873236706936343	2.41447115363919	0.0157580706963134	0.155571368442559	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	2.00259395741298
Merged-chr19-38352905-1	1.70528487656254	0	1.40408598621453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166009194-1	1.56619602853919	0	1.49051347866672	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54762804-1	5.15034706100089	-0.658441136098426	0.896460240987462	-0.734490059897297	0.462650116135971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71119280438604	1.35032549026822
Merged-chr13-64309245-1	1.34547236084622	0	1.414415310678	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156984118-2	3.62643678804877	-2.0405840322916	0.877178379009445	-2.32630452496553	0.0200023108079535	0.187313127265194	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31607134364222	1.14490468848716
Merged-chr6-142989744-2	2.9087609040993	0	1.36825210112682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47214291-1	1.14713956133735	0	1.5433230241393	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75744224-3	4.52239324879129	0	1.32429909759201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47655069-1	3.06253865478454	1.1781182453632	1.05065327971444	1.12131972374693	0.26215179284621	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974378703053907	1.31734301959449
Merged-chr19-5432263-1	1.30208068218009	0	1.78619073786076	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85630052-1	3.43524996331997	-1.48497729011688	0.892673527157167	-1.66351666644129	0.0962090575104922	0.602018296665769	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69951136345277	1.41959898789419
Merged-chr4-10984550-2	6.15790433831361	0.19447165755015	0.960221373671239	0.202527940829542	0.839504017348601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50028700758017	2.23966551990137
Merged-chr17-81663143-1	2.07847620269606	0	1.4003868833731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63898004-4	10.8512329079448	-0.530373052299812	0.511645902950807	-1.03660177720763	0.299921484705663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50298700649896	2.41041824439107
Merged-chr19-44578243-1	3.24924417862916	1.42796208560654	0.823578390568743	1.73385084159436	0.0829445520252659	0.539205600541487	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49168547077425	2.08223402230804
Merged-chr16-93027682-2	3.51972722000324	0	1.38152013489806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12214581-2	3.84578331863622	0	1.34382170551595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48576937-3	9.11514092659933	1.6666311850348	0.666975467629382	2.49878933472392	0.0124618367440532	0.130963522656304	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31785049225258	4.05487363448977
Merged-chr8-72273958-2	7.94076796130887	2.43433083749689	0.705641161047804	3.44981411498468	0.000560972679297826	0.0120165156898136	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17159935898944	4.388170160719
Merged-chrX-166329059-2	3.43691132393703	0	1.32995199287852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7320002-3	5.37396808063264	-3.36765245809974	1.0997671017361	-3.0621505705922	0.00219752881547701	0.0348289396013002	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83644482840074	0
Merged-chr13-110431608-3	7.47432301056157	-1.02320681534726	0.72087563995471	-1.41939435685681	0.155784076717247	0.851694826347979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86229791616609	1.354969417986
Merged-chr17-84340716-3	5.35566673242236	0	1.32189599239276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118737275-4	5.10858535870289	0	1.31790537461483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134784638-2	2.95987694760409	0	1.36198198450171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31119585-7	20.6028564655871	2.01193590571417	0.368407333679196	5.46117224546386	4.73000844894814e-08	6.59034396812293e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5067228419139	5.44544917231052
Merged-chr17-29049305-4	11.0500553943687	-1.17921136295561	0.546425216487883	-2.15804711673983	0.0309241687188317	0.262608281884441	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98489871570573	2.76834798724332
Merged-chr18-11860596-4	8.51161921673202	-2.02241346608736	0.715752764599917	-2.82557548655481	0.00471957660939536	0.0622663947340095	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40574280216717	0.845523456341755
Merged-chr5-147071237-1	2.79032843135464	0	1.35489042099339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63855488-3	3.97455523847829	0	1.30654458504206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52618738-3	6.22789241036547	-0.738863869128995	0.864269886185343	-0.854899471726528	0.392606803095091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14915768642688	1.68089718199588
Merged-chr3-9029160-1	6.78542310901241	1.14151373766987	0.877039144245579	1.3015539216916	0.193068920217066	0.992965665095524	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55694536828934	4.09010984099742
Merged-chr4-105252779-3	7.40213832130814	0.406665477639392	0.672260372169615	0.604922578326225	0.545230440312587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74453083941444	2.16596752412581
Merged-chr12-24734074-2	5.24186098168621	-0.235978508673505	0.77012860927983	-0.306414416800039	0.759289132916622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3160267771516	2.65768825040625
Merged-chr16-43432235-2	3.69577656925094	0	1.31263180495779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34303598-2	3.42460783449692	0	1.35521542384435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36499999-2	4.03391877156396	0	1.32689780520291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12755978-4	8.0606441529447	0	1.29288156080589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40692042-4	13.6871304995441	-0.426997776900474	0.392639693467515	-1.08750537453188	0.276813524634807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.85974645986961	4.30402059083239
Merged-chr6-134537567-2	5.77498658886203	-3.95817208285666	1.07810516593763	-3.67141556122145	0.000241210771880307	0.0063174986369902	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79999816099965	0.563523181795778
Merged-chr1-157407724-1	3.56062606433683	0.282586889513566	0.708431327741981	0.398891012364274	0.689973511870407	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0042822131508	1.47711801254374
Merged-chr6-89258913-2	3.6103522320754	0	1.310475370361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11705249-2	3.76398451936517	0	1.3332063327213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109821872-1	1.27647345486088	0	1.773243991668	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22701138-1	2.24289541406089	0	1.36616480923546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52199531-2	4.02468939574547	0	1.39549035174895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59349919-1	1.68519606452562	0	1.44797153055075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72410120-1	2.25578860421309	0	1.36031575469761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69157183-2	5.80448399709372	3.92796194912388	0.97010898300086	4.0489903896915	5.14390567710582e-05	0.00186120520695546	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	4.12297233384676
Merged-chr8-107576939-3	3.70740057565512	0	1.32262762865028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75704614-4	5.99908561139458	0	1.30469556608081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101653919-2	6.85919138093855	1.57220140429183	0.537367808763348	2.9257454180405	0.00343632016385985	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79455640217639	4.13154031238104
Merged-chr11-119447153-2	4.72321650685361	-1.18313864084459	0.974256957801733	-1.21440101748328	0.224594627074392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66054350100191	1.45327344926554
Merged-chr14-34644046-2	3.02599638488978	0	1.33745356424239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70235368-2	5.13599488696319	0.792787969301136	0.801750189057202	0.988821680520456	0.322750394768454	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02928942523154	1.6995072319729
Merged-chr15-25566868-2	2.64255847877454	0	1.37297011082013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85492474-2	3.85811843516028	0	1.3579056199177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23115615-1	3.45338969047145	3.60588885936902	0.947367016875135	3.80622165975648	0.000141105929313129	0.00415909249296155	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	3.36947549187724
Merged-chr3-90016876-2	2.67581324127801	0	1.4119694510221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138705420-4	8.1283350546445	-2.13545300476675	0.652573331850334	-3.27235714446344	0.00106654755738842	0.0199640838399036	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15637293405461	2.00098049458557
Merged-chr12-84004708-4	5.88174156831235	0	1.30458446847611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120766497-1	2.24018145679826	0	1.44965695622215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36205911-2	7.30785102212904	0.374186880220718	0.952155038078963	0.392989445264781	0.694327276996674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.797562664687189	0.666688015277142
Merged-chr6-117921492-4	4.27977524910372	0	1.31584257074557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126464617-2	3.96188378058788	-1.371221461304	1.0550647933876	-1.29965616320234	0.193718841166427	0.995185875009389	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74941225093929	1.41926493179619
Merged-chr11-75415242-2	3.0182151538845	0	1.36274758377216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60744302-2	4.63148203995776	0	1.30188092537911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86924005-2	3.86258315234295	0	1.31825437011304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35174262-3	5.10391728627338	0	1.30345051362715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118896385-3	6.99946406868813	2.69793323163243	0.855638901719512	3.15312128306766	0.00161534678230657	0.0274672003217812	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.803892645765084	2.63357992545343
Merged-chr6-8274615-2	4.04385272995749	0	1.32307408643809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131281649-3	11.5905064401627	1.20295504367724	0.562519027472275	2.13851440560655	0.0324750162168545	0.272345021779591	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47192377206301	3.64264230873039
Merged-chr11-70280642-2	4.33224834899884	0	1.32352341094364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12030958-4	9.13723881572824	0.191054224894956	0.473160490781606	0.4037831319757	0.686372201554189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58192762735436	3.78683844338055
Merged-chr16-65174748-2	3.08892506094951	0	1.36382097595561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47939991-2	4.0245475828681	0	1.33400234124193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106151940-3	4.78561550084467	0	1.29778798822576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117569027-3	5.32745183793633	-0.764434417020632	0.768684882537374	-0.994470470782888	0.319993874629675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21773518184569	2.03415454436003
Merged-chr5-16506876-3	6.32771238391707	0	1.35350234068455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75392591-2	3.52434734466734	0	1.31852294704089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121445375-4	6.16840319247038	1.98745722370357	0.915247281313854	2.17149754419432	0.0298935825881924	0.25598888755738	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	1.47711801254374
Merged-chr4-53135666-2	4.99257390690325	-1.4273418278281	0.834952303207815	-1.70948905984734	0.0873603964983359	0.559397596235204	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80163102547254	1.69757189012738
Merged-chr16-49967257-2	4.09032515843187	0	1.33228795753547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85134392-2	4.02878756339593	0	1.31142570555943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88726824-2	4.79366034706478	0	1.31675184477953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152597606-1	2.69005127324612	0	1.45888685184528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155476458-1	2.69146803064412	0	1.36241411311663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50540346-1	2.90457581360662	0	1.37313690535791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39504393-1	2.48886761096902	0	1.38775823669727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56270049-1	1.3507172870944	0	1.47336023430362	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161809710-1	4.70242020529806	-0.318994017884031	0.799522772296186	-0.398980528056627	0.689907551921956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43235047531335	2.25143168552214
Merged-chr16-91852407-1	4.1065845027009	0	1.31367797261826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99390650-1	2.94169270014342	0	1.38685702962812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39202133-1	2.15299852225443	-1.18409131334546	1.32936036078198	-0.890722597331643	0.373078008737396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63898224321771	0.581381506691384
Merged-chr7-115132589-1	3.20854566556644	1.29448947605649	1.22381554572762	1.05774884178877	0.29016996161152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.781596303653021	1.46894927517136
Merged-chr3-88194832-1	1.39968561622455	0	1.57405588920565	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69238400-2	2.90600279417758	0	1.33199745646446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36510198-1	3.94925666926842	0.107095767412965	1.31046430432216	0.0817235288742647	0.934866567604053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr19-11803617-1	2.4975361573624	0	1.39469629300298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16995154-1	1.90499819619306	0	1.42170219981825	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36676757-2	3.81673754647012	-4.1577115239729	1.18149322759071	-3.51903119449214	0.00043312577682344	0.00987639489137944	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59856633208159	0
Merged-chr16-24785873-2	3.23737806078677	0	1.3107698780481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170565083-1	2.2212932807609	0	1.39432382036566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94477376-1	5.79206390425746	1.89048812912111	0.738167733225163	2.56105495272909	0.0104354848338892	0.114627196496104	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83046244782811	3.12818529348344
Merged-chr19-55265456-1	1.67550089097628	0	1.46677767808684	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87507871-1	1.40189499969048	0	1.48261814105776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-5223619-2	4.02079952784945	0	1.35804487743427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50110924-1	3.33163694791548	2.27975642638639	0.961901623849098	2.37005154151194	0.0177856056907904	0.171026459484273	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43009708706973	2.9187417491456
Merged-chr2-118968274-1	2.79686480737888	0.35233338694072	1.27374709024412	0.276611730569837	0.782078256350629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96174823476685	2.52879699405213
Merged-chr1-138300512-1	1.98653225498489	0	1.45768251205008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119147920-2	2.94536931318019	0	1.38883410584074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81120292-1	3.79948980374003	-1.30867049121724	0.83057380804308	-1.57562215247385	0.115112907762787	0.688422436668156	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3345830091698	1.486851288245
Merged-chrX-139986843-1	2.57015227704248	0	1.36109447430548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56836055-1	1.49848194697632	0	1.41628959956272	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81679835-1	1.52644632848489	0	1.50342142674951	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16293407-1	2.20320275250031	0	1.36126418519519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79294965-3	3.00032394775597	0	1.34012840199965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9709085-1	3.15514772470564	0	1.36031323422754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6405441-3	4.25776522199547	0	1.30454456283071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19849250-1	2.7818560760949	0	1.3746080971703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167743170-1	1.87282315966301	0	1.5132167067009	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-11350376-1	1.87021713573599	0	1.4719156191201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59146262-2	3.82057733939956	0	1.39089753677515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101567162-2	2.37015393728911	0	1.51623406949187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47442157-1	1.74221260812128	0	1.45121354279751	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34530260-4	12.8700232030177	-2.08174580787838	0.512240962077902	-4.06399714586236	4.82394157901935e-05	0.00176695788353474	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.38861341471169	3.48770167500569
Merged-chr4-116789149-3	4.05797262978402	0	1.31849518926924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102823590-5	16.097365624951	0.236959408780154	0.41449012067698	0.571688918406866	0.567532743250514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9010312464925	3.82617577709259
Merged-chr3-10307052-4	6.03814777029487	0	1.3104813518689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34960322-3	3.97385615730401	0	1.31373663542546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65693192-3	14.9168083327046	1.30086926610592	0.520065453375654	2.50135681511279	0.0123718459206418	0.130374236982787	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95004662488038	3.4094574864379
Merged-chr4-101159616-2	4.5740403806904	0	1.32559876378399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116184082-2	3.26901685454443	0	1.35380045904508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142045513-3	4.49950194274971	0	1.34975539017568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140540302-3	3.42212079528209	0	1.31836319271212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-60805067-3	7.63659187576117	0.377147487471697	0.478858494766658	0.787596944804072	0.430932502336383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62335045689464	4.08990144398959
Merged-chr14-72601838-3	5.45744532944627	0	1.30641511064153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102967110-3	4.5644047773408	0	1.31877887531526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46735713-3	4.00333807595552	0	1.31577876845191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134480955-8	17.2825129586783	0.0106264019031939	0.391239481528683	0.0271608628599382	0.978331431094308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.55960269084416	4.38011747577852
Merged-chr19-43992838-1	7.42513470179498	-1.31668739531865	0.584992053665582	-2.25077825770151	0.0243995852873882	0.218508823302865	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15701389106847	2.902369115803
Merged-chr10-88327631-2	3.58168535367749	0	1.32101931171021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88862788-4	6.20232912781523	0	1.31003153536738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126330744-2	3.06682808639287	1.29072449312182	1.35067124066695	0.955617069690821	0.339265734327134	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-129599534-4	5.70762400510706	0	1.32012668374491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6524608-2	4.77861678908685	0	1.31331304844461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91168160-1	3.88577048218595	1.14632393386968	0.877119207948043	1.30691920035753	0.191240154439503	0.986119611705715	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49076110947268	2.24517688100283
Merged-chr13-88765863-1	1.76639544646562	0	1.42622111186442	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116425592-3	5.17126755889181	-1.05465493402819	0.632260964963788	-1.66806902919998	0.0953020244146406	0.597985569528035	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86767768161125	2.52234002410264
Merged-chr18-75047418-3	6.61932856616119	1.19918896510181	0.674012315287512	1.77917960533151	0.0752103209036812	0.502062889955251	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75024464937729	4.27175173626761
Merged-chr1-82795488-3	3.76351549737769	0	1.35245572359037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10905443-4	5.11664677532363	0	1.33738646068378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165724861-2	4.19743073045519	0	1.3422955236427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54715239-4	9.63944288705791	-0.66965897629748	0.570263473617037	-1.17429750857091	0.240275880888595	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49509521916026	2.59440027121943
Merged-chr4-94985183-2	4.82109408459776	-1.18793320753766	0.820391507101063	-1.44800768566626	0.147614901150308	0.819432619415699	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40023453447732	1.47126464988938
Merged-chr9-40761432-2	10.7700942100875	1.63869744528714	0.708568076549564	2.31268878675275	0.0207397559756494	0.192782374677779	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81880354324027	4.69285658853055
Merged-chr10-122804083-5	10.1239480488831	-0.080678400451885	0.479447479733857	-0.168273698084032	0.866367964684313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31417551698459	2.6644193454103
Merged-chr8-23109412-2	3.60630201790366	0	1.38785253486893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128359218-2	6.06567596220623	-2.17219693694799	0.735093095686419	-2.95499570012915	0.0031267340868783	0.0458012924548643	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72300497519636	1.26501898168246
Merged-chr11-87436507-2	2.91890814865563	0	1.3363333992045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161409286-1	3.78271248020958	-4.6703122882049	1.10633816415165	-4.22141478937966	2.42773728664461e-05	0.00102814595420012	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2387909156619	0
Merged-chr10-87854583-2	3.99698757492156	0	1.33139643429719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171942869-1	2.60922015430826	-3.66512284922349	1.23568127453839	-2.96607460576164	0.00301627310563541	0.044521557030198	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1331192428342	0.382164212378408
Merged-chr10-43001309-1	1.81778112816757	0	1.4939492658437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87959085-2	2.36629399823726	0	1.45251981080394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137718166-2	3.473595838971	0	1.32889018501893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132113828-3	3.47788901694071	0	1.33552139647476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62841807-2	5.20692427233099	-2.43555769320855	0.904185685012502	-2.6936477026562	0.00706748233214341	0.0846545208194721	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97884689140598	0.581381506691384
Merged-chr7-144907218-3	5.68963545650086	-1.10754778980543	0.98221651173814	-1.12760045933814	0.259488692629342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60591638590915	0.666688015277142
Merged-chr9-108847732-4	9.28222528718448	0	1.30823749596185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114970319-2	10.5197384316203	0.674883425214379	0.460424463416273	1.46578533253176	0.142706778167206	0.799760141356524	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.220263645999	4.90536029586915
Merged-chr4-88412580-3	5.85363750629275	-0.42408986933187	1.30073883839812	-0.326037677059097	0.74439584909141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr7-81234343-3	3.13345873238496	0	1.41201826731167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40023589-3	8.99679615578964	2.3340563822481	0.632706753614334	3.68900184629738	0.000225135585631575	0.00597793985318199	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84360955958018	4.16859788907049
Merged-chr4-3650560-1	2.75444899018492	0	1.3280692857704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-175639973-4	10.1973032746183	-0.219173473014183	0.439301925139315	-0.498913072016875	0.61784062461717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74734466177579	3.47620850822374
Merged-chr13-111467495-3	5.24326497560441	0	1.32645622147247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81594413-2	3.92780897724107	0	1.32743669234636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125090002-1	2.06299706973177	0	1.5093763944625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161894309-2	4.59274085598308	0	1.32977956236955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98294694-1	3.42924206365211	0	1.33125422302725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75499501-2	3.3969157139027	0	1.37261866703759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146746721-5	7.39105049755908	-0.67712342110558	0.63796703807351	-1.06137681211605	0.288518690476943	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60763814101296	2.45916162824808
Merged-chr10-68256289-3	9.17637265887352	-1.73390100677389	0.694102905781537	-2.49804602794678	0.012487997807101	0.131141173484132	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73783907418098	1.99834080004871
Merged-chr11-107011848-2	3.91615456040583	0	1.33006402163432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21035764-5	11.0612255974079	-1.840181158396	0.713102190257409	-2.58052938770494	0.009864895957189	0.109799266090695	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58090460498996	1.69686753743604
Merged-chr8-53627119-3	4.45495311547508	0	1.32243118690267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86479284-3	4.64651190700562	0	1.31605018481986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30719332-2	6.63381725506894	1.80042225982643	0.705111847325402	2.55338534823335	0.0106681394694048	0.116575291265506	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93344366400995	3.55174571588551
Merged-chr9-9682532-2	3.11192622568988	0	1.33074812529354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27190377-2	4.4691011342799	0	1.3263302087824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81241080-2	3.57413654206244	0	1.36275738385013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72244782-2	11.364318452475	2.71942188866335	0.582625748439211	4.66752781858403	3.04845485547346e-06	0.000195874465079419	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3876486657036	5.11737834255412
Merged-chr5-142899382-2	4.8664323836901	0	1.3505159148932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12204622-4	4.40208077878405	0	1.33329130256878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77874467-4	4.41705815156053	0	1.3135792536584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42515566-3	5.29615246455678	0	1.33982118136708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25048017-3	4.20105641784304	0	1.32259732796414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99268918-3	9.5624268051879	-0.129835406956811	0.60211418467048	-0.215632533267534	0.829274194442978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11623660033606	3.23354700132146
Merged-chr10-80566518-3	4.57994517560004	0	1.30048298955341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100216348-3	6.44870271258183	0	1.30056924745699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33895202-3	5.51034638582155	0	1.32734353422574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25107779-2	3.41526093619398	0	1.36517120566999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146251970-1	1.37405313061621	0	2.41629897390754	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21139684-1	1.93813462625768	0	1.39675227231495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36130745-2	8.7674993198823	0.621908998911862	0.867098714916943	0.717229755059011	0.473232342320318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81774915962345	2.22804756028978
Merged-chr16-24115610-1	2.29758795884976	0	1.4959080582779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62865579-1	1.74414985636245	0	1.40790832229342	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21330982-2	2.39208972731759	0	1.42326001799446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32427836-1	1.55467299259657	0	1.49405465821331	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114660116-1	1.91698910346322	0	1.47208746534989	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39854045-1	5.69717873611331	0.869720823893109	0.668012803358174	1.30195232714242	0.192932682911247	0.992628855800202	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90787352687976	2.84793875274919
Merged-chr15-26016520-2	3.43565109902148	0	1.35768860915353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61135737-1	3.42765809296794	0	1.40037854384992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70355086-1	3.923185966796	-1.06726059360367	1.16872586961197	-0.91318299812942	0.361146304286709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38306523614474	1.31470332505763
Merged-chr5-117182648-1	2.26164661141746	0	1.49734700339859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133701227-2	4.65150488736061	0	1.32066668836506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16363934-1	1.61312617661774	0	1.36994563333064	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57552882-1	3.2065105238818	0	1.33182873638681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3157884-1	2.42220346874155	1.09093664684126	1.14106407046918	0.956069580205689	0.339037082277109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648566509472229	1.13404870833161
Merged-chr5-43693136-1	2.90352127088897	-3.64548256756373	1.15432470328842	-3.15810842233433	0.00158796485763082	0.027114489570615	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12869789863001	0.420961122473315
Merged-chr2-132509438-1	2.07848559930616	0	1.39447709291106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125777986-1	2.10151459848586	0	1.39263426431659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75502350-1	8.4494633909857	1.24284546132493	0.756700148651812	1.64245436391055	0.100495876413842	0.623114483360749	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62391157686119	3.86403106287076
Merged-chr5-96804978-1	4.53111935860715	1.88817801338342	1.07184395032926	1.7616165233786	0.078134110282936	0.516435617018751	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59710854189025	2.24620897574346
Merged-chr5-113826737-1	0.837493692721392	0	1.75702294987589	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79273987-2	2.79132146913922	0	1.4317844134046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10376822-4	11.3595736836103	-0.763300553795676	0.434048118839739	-1.75856205951558	0.0786519219853129	0.519007643650851	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13752612267626	3.10829358559163
Merged-chr5-22856014-1	4.38461315778201	2.07604902793453	1.31214414188637	1.58218061694804	0.113608343946401	0.682213824988196	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.43750690265746
Merged-chrX-51461640-1	1.60330039773197	0	1.5613994875578	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45911052-1	1.59314179120503	0	1.41824169691965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58731011-1	2.44871446260529	0	1.35869121156011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120362739-2	4.49699881858037	0	1.33020034966978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55280451-1	1.64160014802453	0	1.48237701013207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30990418-1	1.70559121978899	0	1.3971077287687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141267958-1	2.70382669688108	0	1.36284853836012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84637675-1	3.14424323751491	-1.27682792153299	1.26297434106104	-1.01096901181722	0.312031261535929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	0.382164212378408
Merged-chr13-41302856-1	1.94983179172493	0	1.48830080098118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-98919606-1	4.63823227964218	-1.5888353448129	0.951044573466026	-1.67062132432183	0.0947964977663026	0.595674533259265	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35247133843551	0.683637474991079
Merged-chr19-58918782-4	11.0469472631532	-1.08297263325521	0.512716800294431	-2.11222380977823	0.0346672572337896	0.285095216612033	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83108698997895	2.48853090112376
Merged-chr1-152555186-3	4.30663551893639	0	1.32875956200127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102416449-3	9.57700201097332	-0.775969712587101	0.719952872706696	-1.07780625927612	0.281120225643287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73285830757637	2.10134524129244
Merged-chr17-50528069-4	11.4496173353331	-2.00753447694614	0.633813122038787	-3.16739178653875	0.00153812942916331	0.0264556827921689	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94392142416657	1.47158896970822
Merged-chr3-139099483-5	9.7900312557883	-1.6955698679416	0.680529507015174	-2.49154496676922	0.0127188866189302	0.132937998240661	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43041764897008	1.35700371934843
Merged-chr13-58117833-3	6.69101843788888	0.932616028450518	0.895273636852463	1.04171058999273	0.297545877684309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.697647257810764	1.53857528724196
Merged-chr15-34775919-3	7.32361017844141	1.5772323323806	0.718599093867051	2.19487102870242	0.028172850554112	0.244032753487407	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33780204396814	3.20314576601682
Merged-chr11-43213328-2	6.78478530001321	-0.566067628552941	0.614940190145622	-0.920524691057992	0.357298636236709	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42526193958759	2.43884655774859
Merged-chr4-19950765-2	7.10698962178025	-0.809546009853437	0.570754469594369	-1.41837874774555	0.156080216916363	0.852922727785416	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54575830487123	2.91601014191884
Merged-chr4-66816822-5	12.7147204165775	0.712055768855801	0.602239636463495	1.18234623851259	0.237068345710873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71995236401443	2.6644193454103
Merged-chr10-69306389-4	5.55477108675547	0	1.30362424744269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115100690-4	5.05267204447742	0	1.32417322373667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9394146-2	6.92136813573746	-1.97778634473916	0.608359415732397	-3.25101624729211	0.00114993285923983	0.0211671866534889	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.426840675891	2.14016883463966
Merged-chr11-116406317-2	2.91958111121598	0	1.32125162652383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8928964-2	3.01270112929852	0	1.36793442662392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85671162-2	3.96587825044547	0	1.31584053744694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150013389-2	7.48786965005165	-0.988651933765204	0.644035533882633	-1.53508910883382	0.124761941183202	0.729547544389932	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01852426861076	2.51338020061524
Merged-chr4-154837359-2	7.3420470195411	-1.39822434023898	0.520788600262893	-2.68482132583771	0.00725685893178785	0.0863607182219284	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07872526810077	2.62868982641478
Merged-chr7-145050908-4	8.2828097274321	-0.660695845473467	0.670363443675464	-0.98557857190274	0.324339957411855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7880051311103	2.08137696679909
Merged-chr7-98338437-2	4.18407086219731	0	1.30865564279586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88830278-2	3.48182766952218	0	1.354458311239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-109231463-2	2.68180778234154	0	1.4390188755944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-63872-1	2.22771606018019	0	2.43325263793092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96630613-2	6.15830953868742	1.40856903565758	0.628627950340308	2.2407037976836	0.0250452679532267	0.223244861502054	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94930953566968	4.13777493890679
Merged-chr9-66895007-2	2.64067132114538	0	1.35128608568769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16064300-3	9.31690090812397	0.380909343231211	0.686704217941351	0.55469201044538	0.57910534193516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47663207055949	1.99834080004871
Merged-chr4-45285541-1	5.00936458086839	0.465284484753216	0.501432879837511	0.927909803010905	0.353454358919103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21473674803132	3.60320420478393
Merged-chr11-46215515-4	4.18116222678533	-0.981295639637995	1.32141594789436	-0.742609199776694	0.457718317071045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr2-117384000-1	4.1958945600029	-1.95887210161756	1.27234872714009	-1.53957170690193	0.123664786473012	0.724688291351937	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39018204744963	1.29684500016202
Merged-chr13-50949684-3	3.84812776877863	0	1.31917046615655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39274444-1	2.02757425873315	0	1.40143545526456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112448675-1	3.07442414620177	0	1.34880467104831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27724517-4	4.55144102163029	0	1.3158815505122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40777278-2	6.17197468272281	0	1.31121607328531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105957650-2	4.05455341916311	2.51510207328387	1.31352450260549	1.91477362492663	0.0555213794760777	0.400452545611895	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr6-128872438-2	3.34774389265136	0	1.33295267625586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96279301-2	4.43666934219023	0	1.34686646163206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78903390-2	6.25419256811168	0.672639851825643	0.785986336903422	0.855790769182663	0.392113521983326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7307888085558	1.78612360069773
Merged-chr3-52401303-2	2.2862316573611	0	1.38485489881687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76275160-2	3.54255856053493	0	1.34782450953908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129092370-2	3.32975241869511	0	1.36917745715178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36761085-4	3.31993875733108	0	1.33821978591146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17261304-2	3.54094930628473	-2.66039930154699	1.31789414098804	-2.01867450412403	0.04352106163809	0.336161618652793	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52513465514613	0
Merged-chr4-140173434-1	7.49826844969979	2.50633266600984	0.874370423437267	2.86644264127452	0.00415113376132032	0.0565242731334106	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0961768335424	4.42013469493175
Merged-chr19-41773953-2	9.04830864723782	1.09524854151882	0.599789003622628	1.82605638800261	0.0678417685594385	0.46469478074267	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32231534737367	3.4557777556214
Merged-chr17-79347444-2	5.77404055277758	2.73092171135617	0.855949369383234	3.19051781453379	0.00142018085134975	0.0248735293251945	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883885072827272	2.51588681378309
Merged-chr6-17481258-2	7.30785328923531	0.836131431009303	0.566795588578518	1.47519043524361	0.140161352208903	0.790180633374427	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19472097750272	2.56626979385927
Merged-chr4-98465639-2	3.32719638980462	0	1.36568836121733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19266892-1	9.71209626658664	0.484625643398706	0.760469798450959	0.637271387221248	0.523948085103801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35761893492608	1.41926493179619
Merged-chr11-5945303-3	4.50861116976714	0	1.34339260432569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86659142-3	4.25064074660924	0	1.34321243942802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17633969-5	8.93499837333365	-1.45500461019039	0.681798166498111	-2.13406940893324	0.0328370995633282	0.274613739704379	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41658584085476	1.67453645373796
Merged-chr5-64134115-3	4.03431681474144	0	1.32199439439997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44922686-4	4.42685842937401	0	1.31915916183443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97229592-2	6.42779212554702	2.99586342568168	0.943719477760748	3.1745274907224	0.00150080673505981	0.0259655061978338	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	2.27312352959067
Merged-chr2-129562565-2	4.29067078985891	-1.52652272373929	1.21876589071374	-1.25251513467062	0.210382216968658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	0
Merged-chr13-40977807-4	4.80901806490017	0	1.30083342157649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-15986676-2	3.50865827604515	0	1.33409866615045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152187289-2	4.11396574613758	0	1.34727128249178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85151046-3	10.0700545334415	-0.152703815879904	0.446120835003102	-0.342292499920659	0.732130779267356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00508628542599	3.70062961496664
Merged-chr5-122732212-1	3.54885356344272	0	1.32520460126679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21354877-1	2.74068020528457	0	1.35823624650456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87350513-2	6.22510954274802	1.94789610779273	0.860106151099325	2.26471593686788	0.0235301168640419	0.212698715810995	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.86914304741896	2.2547128493771
Merged-chr19-9930453-4	5.99731174898525	-2.18144815261775	1.02404286615471	-2.13023128690804	0.0331525232401415	0.276289348762949	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19921762808704	0.581381506691384
Merged-chr4-65590006-2	3.30945041038008	0	1.33291208987775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35214816-2	4.91651367920516	3.39912934192728	1.1286220627124	3.01175163434092	0.00259745021246563	0.0397036214231061	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.905469781553611
Merged-chr9-61703995-2	3.70705865559821	0	1.31948040415842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99463326-3	8.76062580664495	-0.0175929321082087	0.460109501812503	-0.0382364025061537	0.969499197103957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64074763343929	3.56318844920718
Merged-chr19-37814667-2	4.31584922379254	0	1.3393776125643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77790979-4	9.64713334914094	0.160818558771388	0.501324283076583	0.320787490652674	0.748371439832707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7414373062723	3.96465011113603
Merged-chrX-163746262-4	7.40936514666616	0	1.31216272671094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86444225-2	4.03253836810172	0	1.3269963493259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89034748-3	14.3767972789375	1.62746804930102	0.434155232031922	3.74858559617992	0.000177834645289981	0.00498940089290769	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26360931129059	4.87171184067526
Merged-chr8-124212774-1	3.03352495018511	-2.56509242060747	1.03030469103538	-2.4896445128574	0.0127870921995619	0.133458764873434	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01772808874043	0.666688015277142
Merged-chr14-21985573-1	1.65337026732959	0	1.41651431347153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102579239-2	3.46671468445475	0	1.40320634468273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54889221-1	3.66832735546978	1.89577080027348	0.950388642273775	1.99473217160709	0.0460720985888791	0.349098719200938	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29727068782171	3.03052458879259
Merged-chr12-35044127-1	3.8907314871139	0.753485292429966	0.911462286982401	0.826677420658343	0.408419922544112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64040865414138	2.9378031202644
Merged-chr4-9683953-2	5.09566749712931	-1.4313046214628	0.784677787585992	-1.82406669859499	0.0681419893109362	0.466213635589199	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29948755782808	1.92713101668536
Merged-chr4-149158847-1	2.86611437125131	0	1.3436871467711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24684715-1	1.16673476623655	0	1.60896085685533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73450349-1	2.31077714717957	0	1.37895441570874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117899243-2	9.06414431687932	1.25320138202237	0.514315446898897	2.43663959458858	0.0148244463319505	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96873977686245	4.14791902149218
Merged-chr14-103532052-1	2.56608845924451	0	1.33731041946987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59889447-2	3.40978476230687	0	1.35028103946314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15813933-2	4.58693909467124	0	1.37013399132767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120105219-1	3.90633397573419	0	1.33316951856007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115493574-1	1.9690933795144	0	1.42684869035723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23527230-1	4.38413036740319	-1.13752533970871	1.18843629352635	-0.957161394266596	0.338485799482778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.987850314215845	0.306240821987646
Merged-chr7-127163669-1	2.41408438881537	0	1.47927137120592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68952221-1	2.16059942487887	0	1.38145548776398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88203049-1	2.29972755677408	0	1.37692602607475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99677465-1	2.13289957783351	0	1.43040056327714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89449670-2	3.59044314359955	0	1.36055202881644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90710683-1	1.90940810333733	0	1.50024322574447	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7226446-1	2.83906128063633	0	1.37136506764579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80730164-1	6.12747449591929	1.2963656543509	0.711658948863363	1.82161083819912	0.0685140552480449	0.46807086775416	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13467272601484	3.0874689569034
Merged-chrX-142504830-1	1.3739517625168	0	1.53778392662677	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101559660-3	6.21646353547476	0	1.31006767097237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150488924-1	3.59741122335795	0.403932015262185	0.900656749024402	0.448486080518163	0.653802429667243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14375289421013	1.31734301959449
Merged-chr12-3778424-3	4.12449284254622	0	1.32929317669325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41101944-1	2.72893407102677	-1.07524145430469	1.16912272089642	-0.919699390907617	0.357729871026566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37760979807603	1.10669213789164
Merged-chr1-135594236-1	1.7777263123728	0	1.7615335591141	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121931535-1	3.5015934919375	0.61110098719933	0.894186450904748	0.683415619394603	0.494344253001808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96444383892057	2.54911532759686
Merged-chr13-97249177-1	2.35122559632071	0	1.37464790930739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-19968127-1	3.12079915580092	1.87201964523769	1.34055215109479	1.39645417278907	0.162577771554292	0.877348010569559	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr14-25470840-1	3.3090518736085	0	1.31958087724989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52920886-2	3.48182359830932	0	1.345860452846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101863644-1	0.62197811156195	-1.34928787243198	1.81609102122153	-0.742962691112491	0.457504268674847	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27099349514517	0.469435083901436
Merged-chr9-61350663-1	1.86981726638055	0	1.52388741900354	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78245668-4	6.80638612545111	0	1.32535084998601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26213877-2	3.37431862463777	0	1.32215309974331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105660174-4	9.4869205438359	0.207107402836771	0.512712131778896	0.403944806451517	0.686253306584139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04118378709709	3.62648477973364
Merged-chr2-163716625-4	4.44356388045039	0	1.33685202618219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113745564-2	3.56375600876076	0	1.32426397465366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95548638-2	7.49032223602684	-0.73340059131423	0.601473474097458	-1.21933987598495	0.222715219652788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54133566905518	2.42512484922428
Merged-chr11-12050695-3	4.89739980696891	3.40478001477981	1.13457382179368	3.00093299296919	0.00269153786030078	0.0408456184438492	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.60572551668653
Merged-chr10-58378010-3	3.83496664788498	0	1.32134028661096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82567876-3	4.49782940952971	0	1.3234955529667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45481578-3	4.32734791222537	0	1.32676105516635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67190398-2	3.48800183765674	0	1.33466922771306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25035299-2	2.77147962672651	0	1.36015034737381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157130027-3	5.30577744392535	0	1.30680547300589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122381091-3	4.79941175267371	0	1.31795681694966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24675590-3	13.2423437538461	1.19166637346887	0.483804591987709	2.46311505348247	0.0137735709676073	0.140918704939606	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81800216743549	4.44157095909254
Merged-chr7-98771328-3	7.86468947157906	2.72555231328836	0.880920992956104	3.09398043080144	0.00197490512460466	0.032102524943387	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.842437096809232	2.48853090112376
Merged-chr6-127268234-5	7.94286052247231	-0.121905509353888	0.792979399964354	-0.153730991447404	0.877821847603128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5198806429664	1.15307255889252
Merged-chr9-41182753-6	10.9604616338568	-0.0533846039850329	0.552231393682395	-0.0966707155655406	0.922987896473375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29121105544794	4.04524074139401
Merged-chr10-78159412-1	2.8097672506794	0	1.36136763175017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-32252477-1	2.45254893504676	0	1.36862868340761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46770077-3	6.03687626311301	0	1.31689974576076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74906956-1	2.75351165515253	-2.9643374279624	1.11031992900557	-2.66980475674011	0.00758953641949008	0.0892470482037069	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35006071333407	0.581381506691384
Merged-chr1-178329226-2	2.61284490568247	0	1.37337011185257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142904060-2	3.01867683358965	0	1.38168742022725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137577037-2	4.99992643182516	0	1.32770814761787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15808655-4	8.82494540010945	0.235904323230175	0.634003534343774	0.372086763639808	0.709828251046654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22677933158041	2.41235965366896
Merged-chr14-45085383-2	4.27320658448517	0	1.32716231136243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34929757-2	4.95521613760195	1.94178764562901	0.686822435344224	2.82720474128924	0.00469562951843684	0.0620506787688117	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17789877512918	3.14168198528352
Merged-chr17-62604546-3	3.34038140862287	0	1.32115331941015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99092877-3	5.54499672003777	0	1.32031801873632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21601137-3	3.94498951084911	0	1.3480288750933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34643153-1	5.93343074426364	-0.308839649545194	0.938464948085764	-0.329090234190579	0.742087485500332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17878219797673	1.63879159991986
Merged-chr17-8264810-2	4.30522575965926	1.23041420999662	0.835120281144604	1.47333771886157	0.140659994848717	0.792103414631529	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.070069993895	1.89200393807192
Merged-chr9-37248628-2	4.96057090639931	0	1.32304762927618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5253390-2	4.11122002931603	-1.20323408114293	1.01165492920908	-1.18937203428014	0.234293300546369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78652209920352	0.73596151290311
Merged-chr4-119732955-1	4.79656753172122	-0.782860830167346	0.913523682479722	-0.856968292318709	0.391462408365096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35921002141918	1.68807364458303
Merged-chr17-29246764-2	7.1847493071777	0.481659650205812	0.569669933542325	0.845506532547283	0.39782808690341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93138484769884	3.48762807179304
Merged-chrX-7288966-2	2.61996767984403	0	1.35715508195256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104678266-2	3.74938265407158	0.386168992853305	0.91546656671581	0.421827521499411	0.673150915898987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8342607927679	3.2618610394913
Merged-chr1-181616285-2	2.8492929165678	0	1.33413535646106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100590687-2	3.94025949718439	0	1.34837753846397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50065599-1	5.83399947738034	0.0453289184967561	0.76765352655502	0.0590486683493498	0.952913343972355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36715308292216	2.30437869478391
Merged-chr2-155284793-2	10.4346000099951	1.74400368519904	0.746963801849575	2.33479009408578	0.0195543889420852	0.184174272097074	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60147328420163	3.02556788175686
Merged-chr16-91739223-2	4.82305211341528	0	1.35591318410208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116654347-2	4.78785273915039	0	1.30703857103519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94275159-4	12.827337243282	0.799498477423785	0.600959107453489	1.33037084804587	0.183396114628332	0.95728113319778	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07013230550837	3.94214883085777
Merged-chr14-25773882-2	3.57005855416313	0	1.35958311532092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163699621-2	3.91451547361399	0	1.32249438132949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24546449-3	4.25990298959855	0	1.30418031605481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45305470-4	4.60719990107677	0	1.30184269798819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44873890-1	3.41690055417261	0	1.3593664803563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46092825-1	2.66084058125351	0	1.39124814245005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79175547-3	8.35231560622953	-0.483388438310171	1.11794082951644	-0.432391791718762	0.665456682881482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0.469435083901436
Merged-chr6-125600352-2	3.12003116108818	0	1.34714281207688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-29275456-1	2.91380952299117	-1.94381915384682	1.08267765462231	-1.79538124348279	0.0725929787780521	0.489037194972226	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56222179935312	0.773587911294612
Merged-chr3-41348907-1	3.16686244427467	0	1.36071799777752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6098025-4	6.12410138003513	0	1.33086702426017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114967712-5	21.2244283200399	1.79639467350464	0.481063669749858	3.73421396473095	0.000188302361254145	0.00521390088920058	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38998057019665	4.76424111064241
Merged-chr13-49162875-1	3.12065270559964	0	1.31623940685491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104140543-2	6.3108788891266	2.6579722544901	1.02122212818627	2.60273664380027	0.00924829650364036	0.104430479233952	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.69736543272236
Merged-chr10-62582882-1	2.8210638936399	0	1.33458893404851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3149656-3	4.00509584773513	0	1.34347825280472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114917250-3	4.72523213420573	0	1.30894364342058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146770367-7	13.4555698921172	-0.387966667543208	0.569253660965303	-0.68153565650385	0.49553261288634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40846698903221	2.41179153058375
Merged-chr9-114978482-5	8.94876184330324	-1.23279974697643	0.668019782947834	-1.84545394978624	0.0649715314030433	0.449653642349425	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29907374493467	1.89255009218154
Merged-chr13-107904580-3	9.20011596828341	-1.30117302141283	0.844453223500876	-1.54084676948537	0.123354083609387	0.723467756598685	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06918508972728	0.666688015277142
Merged-chr1-65536445-4	4.54050764465849	0	1.33644103981371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110268182-1	4.68728521725285	0	1.34378241773449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24007977-1	9.4192309667006	-0.848392050094425	0.507942683705977	-1.67025154079297	0.0948696064752597	0.59589162592434	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91600279439204	2.44252268086676
Merged-chr12-100732019-3	7.14213333938683	-1.56978339145854	0.770168695890282	-2.03823318168488	0.0415266185708242	0.324476673099256	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51891963672842	1.42539729206526
Merged-chr2-29592805-2	3.45592777224473	0	1.36212352629987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21231895-2	8.29974526562195	-0.479319647662826	0.613124088912219	-0.781766132388008	0.434352028135025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53772487364448	2.40082069256353
Merged-chr9-123951350-2	3.51193083972555	0	1.33523213206924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64806421-2	3.14391845560874	0	1.32689443110149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106528570-2	8.7171996262374	-0.801910143756665	0.484746973878572	-1.65428602336678	0.0980694114307521	0.611609714083557	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36080114221937	3.58531442897122
Merged-chr1-128549660-6	16.3490452308577	1.60841018124168	0.403240411866337	3.98871277260481	6.64328004603274e-05	0.00229567307185645	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72658007120317	5.39088949272004
Merged-chr19-6271462-2	3.92805911024488	0	1.31567206144139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64505436-2	4.61763271210551	0	1.30336659111974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66768930-3	4.01555488804689	0	1.32655505760717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126623779-3	13.7013113508723	0.707400286501446	0.412862332463149	1.71340476202098	0.0866381008340994	0.556466804052866	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52974637648509	4.17875148268984
Merged-chr9-62876296-2	4.48202047803713	0	1.30374689466317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118592828-3	3.47355488637832	0	1.32462500052971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41073621-3	5.67546779118116	0	1.33683164537522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102633135-3	3.84296766690302	0	1.33150447396034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47915300-5	18.376463751237	-0.345884612202879	0.379061294221687	-0.912476735228458	0.361517811028056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70442386351235	4.27272140846023
Merged-chr15-7264021-1	1.93557970163192	0	1.39531428057239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41481730-1	2.37012214463386	0	1.3676535124148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-46148750-2	4.48658312145957	0	1.33078406541537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128181526-1	4.0925173783499	-0.387579275284411	1.21193636362026	-0.319801671868848	0.749118680155096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70066450553197	1.75238521850622
Merged-chr3-136440430-1	2.68745256467623	1.53526835975314	1.27138292466583	1.20755779393268	0.227217402020373	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	0.793480537552656
Merged-chr10-68795637-1	1.89830877148968	0	1.43944137402284	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105900459-1	3.39447736129511	0	1.35216890235546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32856464-2	2.12060782889687	0	1.3789810775366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118556514-3	6.17864924835055	0	1.33776350364583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12268250-1	2.30382561425697	0	1.3589022061196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29379166-1	6.09460195867275	0.922552426290628	0.676925506576927	1.36285664718971	0.172927694051365	0.91804988423981	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58873240794732	3.01773661629365
Merged-chr4-155540695-1	1.5221284090183	-1.87959907642915	1.62444600524746	-1.15707082313445	0.247243426015343	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0577849870307	0.73596151290311
Merged-chr18-80437243-1	4.52162602786475	0.946804776486996	0.852797304392688	1.11023425098799	0.266898097034221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9832059821509	3.17521452392493
Merged-chr8-47940727-1	2.18999581966823	0	1.34891236002902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77828284-1	2.47255052371292	0	1.36216916245605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33389012-1	8.61454282544627	0.852522996250709	0.511924357554226	1.6653300114957	0.0958469341678791	0.600557460939134	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9108731055573	3.62955887783128
Merged-chr17-88458545-1	2.82659870881807	-2.06547204651138	1.31997500691455	-1.56478117819778	0.117634226464175	0.70010212271503	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892005523365874	0
Merged-chr8-77425028-1	2.77628023582848	0	1.37927285376538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69031152-1	2.3210248461421	0	1.45526392953362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113811350-1	2.1587541560629	0	1.35537923711951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135659231-2	2.83821570005903	0	1.40419756371762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37876512-1	1.02643450192485	0	1.79397365725265	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92241372-3	3.60253335398906	0	1.33275456969352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181545576-1	2.16936246055133	0	1.34306921352103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58050204-1	2.29646292217926	0	1.37132182842422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53421703-2	2.24015936120921	0	1.56080455243909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53688873-1	2.78978838783594	0	1.33642051170212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-43364646-1	1.83282385810751	0	1.46204742101803	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49678670-1	0.953952205872188	0	1.79362493353185	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122658528-3	5.92444360004569	0	1.30769747044493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48175787-1	1.95718945086295	0	1.43480175618141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95932412-3	4.97135803546729	0	1.32812902362583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99283821-3	5.81941286516944	-2.65274290553453	0.976570854866784	-2.71638549554748	0.00659990206594529	0.0805824365473208	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22794037995793	0.683637474991079
Merged-chr6-139905696-1	2.59383521343095	1.46060512076858	2.10703652179017	0.693203513875321	0.488181843326906	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.808340254822995	1.44675642717671
Merged-chr7-67707139-2	4.51175019643779	-4.1972050637162	1.14165267873014	-3.67642904178592	0.000236521605260727	0.00621711215501506	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67164870946782	0
Merged-chrX-106047078-3	6.20485941440828	0	1.31759626477022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69421461-1	1.61765670107403	0	1.41037063460421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-89354904-1	2.64011589842882	0	1.43197788257567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113382278-1	1.78176210218052	0	1.49277031257071	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97647416-1	1.49308704015687	0	1.54939174028201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23980375-1	10.6138541800011	1.5266302988639	0.501267239433229	3.04554173655957	0.0023226154008586	0.0363791049819046	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2995559197506	4.01586871627451
Merged-chr4-89363503-1	2.05992552165415	0	1.42889120270499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14131003-1	1.66834899639394	0	1.49925385296111	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70199320-1	1.82781436677106	0	1.63028009015589	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114994568-2	7.64686238779619	0.0588581225110664	0.765309504901853	0.0769076068362886	0.938697046092701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71912007845351	2.41227753265017
Merged-chr7-4556948-3	8.76941895316555	-0.0460026033527989	0.530074298123318	-0.0867851988214994	0.930842252860011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72273894045219	2.47926873502901
Merged-chr11-110979814-2	6.22787116144413	-1.77808032599911	0.708893374261935	-2.50824791224824	0.0121331507671474	0.128501275531607	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65976176460335	1.57664565284388
Merged-chr3-65297204-3	8.26097680598486	-4.75952641960758	0.985579509904127	-4.82916535071895	1.37106524148354e-06	0.00010429991766005	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.75212343533543	0.727201944460961
Merged-chr4-95867280-2	4.54027173001909	0	1.3251069670631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26130197-3	3.84004459417863	0	1.36414705793667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137455796-1	3.74817756414584	0	1.33304753909974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37419762-4	4.63911581066213	0	1.30599703468097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-65696628-4	8.99696937475312	0.242548531354114	0.512894301204639	0.472901591584149	0.63628338938889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46249092888932	3.15988799187641
Merged-chr5-64634979-2	3.56788250627353	0	1.37366307945672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79594017-1	3.82711424439258	0.450578530910377	1.09722977229964	0.410651025232415	0.681328443074974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993642064779401	1.03295826569721
Merged-chr13-54828764-2	3.72034325414037	3.1802878258964	1.1821393170911	2.69028174591313	0.00713917167356508	0.0852551740096462	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29606516661881
Merged-chr9-106470091-2	6.43909539703518	0.183131153691465	0.695850653987082	0.263175945358622	0.792414970285121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23769663012182	3.32569297704008
Merged-chr4-133730360-3	9.55675471817501	-1.78772604171482	0.806728013189239	-2.21602078084211	0.0266900789700638	0.233980399836033	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89496782417694	1.00443616959195
Merged-chr1-193580605-3	10.1987856243237	-0.561615395053147	0.725227116743168	-0.774399332412218	0.438694678312947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69802547516866	1.57074540165941
Merged-chr8-68937832-2	6.15776634184983	4.19824543872586	1.04577064927179	4.01449920367267	5.95721448661977e-05	0.00210158926487928	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.73327766789757
Merged-chr6-31213748-1	3.48487930783619	0	1.35544905402236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137907137-1	3.21992262478912	-3.9730725305119	1.23581881774032	-3.21493124516151	0.00130475769250741	0.023346302347916	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22999688628105	0.382164212378408
Merged-chr2-172378532-3	3.24911405374553	0	1.33353095709714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98960982-2	6.79889825436473	-0.292790957737271	0.668028655865304	-0.438291015163138	0.661175338252041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79301862269388	1.69733277475078
Merged-chr4-144896499-2	3.83143569842418	0	1.32197017620935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56257984-2	5.50031220352564	0	1.32500517074637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13579197-5	8.45776001125682	0	1.352072866812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58572879-2	4.3121600187842	0	1.33244043781097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12044030-4	12.7356929332567	-1.05996782161997	0.619618631506292	-1.71067777455818	0.0871406127630944	0.558701970331354	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03907356707825	1.9263773140144
Merged-chr10-117335784-5	11.0498665110917	-2.35431856719781	0.609492274155156	-3.86275374935841	0.000112116009776703	0.00346398712759736	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.29972131965992	1.78862493009953
Merged-chr7-12961097-2	4.58330079522587	0.348987616164484	0.836819181235934	0.417040651062813	0.676648674027532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14474511122635	2.59230448304335
Merged-chr11-106659400-1	3.26449052801754	0	1.36644033898206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115534887-2	4.10006023294297	0	1.32232234556481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76410833-1	3.20895093873285	-2.55230096030672	1.25331638938499	-2.03643787149321	0.0417064058089339	0.325373723279638	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95478348418888	0.420961122473315
Merged-chr16-95842939-2	2.85391718434391	0	1.39929141266038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113609436-1	8.92172672677911	0	1.37823726425858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99384338-2	2.97117361967997	1.84039377764385	1.08964807538942	1.6889799736361	0.0912232678135981	0.578520541396291	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	1.31470332505763
Merged-chr9-106260880-2	5.71392386338847	0.324204956538747	0.845844680043479	0.383291358553064	0.701503745806892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48926183180263	1.28311275482176
Merged-chr11-73096094-2	4.82876995000615	-0.413873612952735	1.31391038006564	-0.314993791990637	0.752766367396604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0
Merged-chr11-29570929-2	3.4754325215718	0	1.34035237241164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21654487-1	2.07857506854486	0	1.37707715253786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65931484-2	4.57985264417468	0	1.32804711587631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-7282346-1	4.59991896442582	2.53708955311095	0.884234023268606	2.8692512234855	0.00411444857277141	0.0561417323943037	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4082169826974	2.88610343912551
Merged-chr14-104547446-4	5.98787259259719	0	1.3155788739073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87275087-2	3.23208218735	0	1.3248394675952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127582987-2	10.7801912956147	-1.29601381800628	0.59442515203636	-2.18028092109906	0.0292366444202295	0.251149962703341	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65375457992853	2.46681435340383
Merged-chr7-88242762-2	4.02875470798602	0	1.30554997845105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25196533-3	7.33571204566821	1.14389836821852	0.833842498732818	1.37183984980004	0.170113298788132	0.906484842421043	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925679556471107	1.40264952818025
Merged-chr5-9071551-3	3.55258359308529	0	1.31476236429925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13028349-4	8.55099195505401	-1.47295950827322	0.610266493336744	-2.4136332640836	0.0157943508569009	0.155811843462416	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85544837696013	2.25086280164729
Merged-chr3-136434992-2	5.58237694732475	-2.30160879121858	0.995813898749859	-2.31128406031289	0.0208171698679365	0.193268610465373	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52762965641936	0.581381506691384
Merged-chr18-42589645-4	4.50480534960341	0	1.30617373039889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126752023-2	3.09135963491181	0	1.34028634788015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134775077-2	6.22610246908616	1.54099411175171	0.754945828015217	2.04119826160646	0.0412311244447891	0.323056241962733	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32373155271567	3.98990566985392
Merged-chr16-77443508-3	4.19772075197866	0	1.35515412983277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3810404-1	5.33142425975421	1.1683576310987	0.678010387680343	1.72321494231964	0.0848496625794315	0.547721629054187	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72487617843383	2.47744888713631
Merged-chr5-62750596-1	2.62560089694964	-0.421251634849094	1.38231178585289	-0.304744298037784	0.760560908357535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0
Merged-chr14-15201176-1	2.21980905959358	0.751017007070624	1.47792337397829	0.508156931742022	0.611343291791008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.683637474991079
Merged-chr8-111090309-3	3.92757817309279	0	1.31572966274253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91495416-2	3.40034490787992	0	1.32529204576029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110979611-4	5.67896972384853	0	1.32185733103762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170330755-2	3.01090646070316	0	1.3327532376351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89779565-3	6.21375638077167	0	1.28972047812654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23524837-3	3.45916167595133	0	1.31634826445819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57556465-7	17.5160182220979	-0.768680843039173	0.375955361787892	-2.04460667719603	0.0408936506846536	0.321336760177895	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.67820503510902	3.97037473328226
Merged-chr10-27366252-4	8.74833428625625	1.14115965283019	0.542703769696928	2.10273028593015	0.0354893530576046	0.290214688556845	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.179456791703	4.29674310506215
Merged-chr16-87717448-2	3.56825304268232	0	1.33912163095829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127316496-2	6.70773107964651	-0.187644225326107	0.79836424799232	-0.235035857126599	0.814180902672615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30064845208086	1.51124524563069
Merged-chr6-88065302-3	6.04608411892269	0	1.32092710977682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80729854-4	9.92250092082167	0.884826390007864	0.598255884816492	1.47900992278459	0.139137662810892	0.786172910855213	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50495179606221	2.6366167772367
Merged-chr10-14179451-3	5.63436356139861	0	1.32638802648598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11717922-3	4.21267903513028	0	1.33759995175157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55489431-5	8.60690589923044	-0.123002570784271	0.548357070273836	-0.224311087523403	0.822515249416391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19207370510408	2.91852281030793
Merged-chr10-127558507-4	15.9909391976622	-0.464313816990966	0.456943442846589	-1.01612972953165	0.309567613541661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.62663801495092	3.84361762147548
Merged-chr5-88698822-4	4.01784074337816	0	1.33077468030099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93727128-1	2.88043300493619	2.85130101687132	1.26199398610442	2.25936181017222	0.02386088793896	0.214944294086245	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.04220233489076
Merged-chr3-103605851-1	2.1582213108705	0	1.35995348955534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34706349-1	2.76902949918569	-0.395196220513743	0.811649886080436	-0.486904793915758	0.626325801495454	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48614754020569	1.98088044523647
Merged-chr2-153152471-1	1.57042146281449	0	1.66613436458469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86692099-2	2.82528808436203	0	1.36632991102922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115687051-1	2.20924078405217	0	1.37399374028374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165448661-2	2.75695261378028	0	1.33892153055765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22892064-1	1.20222214485186	0	1.67262362793376	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106785467-1	2.62520601697482	0	1.35355768108962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33900878-3	8.4026975370873	-0.141859267397669	0.571605957493344	-0.248176677548573	0.803997710588674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2564158670362	3.11255450472466
Merged-chr11-34229122-2	7.09956803821811	1.0048357186008	0.70241290571343	1.43054848569476	0.152559660414145	0.839649925833634	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59134582712904	2.93326513208709
Merged-chr4-45518044-1	4.97562954415018	-1.06285022619214	0.89055313939103	-1.19347198856537	0.232684576157001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51953243620085	2.16680051662379
Merged-chr6-119499483-1	2.51565912546624	0	1.38956539358315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86265795-2	3.43409189465003	2.65906855277591	1.1594914356575	2.29330590205529	0.0218303996808115	0.200749971508909	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.29948469469889
Merged-chr10-39442241-2	3.00235357464131	0	1.42952503070648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-9647881-1	1.45687952768933	0	1.54844923700633	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81787944-1	2.98313947347909	0.0865613236197575	1.21549379494184	0.0712149448890433	0.943226687315014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917336671752516	0.683637474991079
Merged-chr3-127856892-1	2.63936975559701	-0.778224780399747	1.43259327962559	-0.543227998810058	0.586972831186404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0.382164212378408
Merged-chr7-29489009-3	3.91220751897899	0	1.32346522299589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124347300-1	4.19063609060797	-0.12514019226626	0.878591932801225	-0.142432667082742	0.88673826081551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50364537937687	1.15868211970568
Merged-chr3-90295792-2	3.84909373025976	0	1.3374775555684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191199282-2	3.47562558029841	0	1.31931284399905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23038060-1	1.28984134876083	2.01395000905739	1.79363274309025	1.1228329861929	0.261508433029481	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr15-41029840-2	3.08401226104678	0	1.37184115175498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21830066-1	1.84516091888927	0	1.43427446109909	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9791952-1	3.06251801308862	-2.998789641923	1.18226304079071	-2.53648260874109	0.0111972304229672	0.120821370412684	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73344789304506	0
Merged-chr8-77436379-2	4.20317792824772	0	1.33013028003526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64697448-1	2.20999918575421	0	1.35614708631429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10819943-1	1.654394119016	0	1.44862416258271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-49976148-1	5.97110029978409	1.96415906276929	0.700284690301599	2.80480080454616	0.00503476840963449	0.0655251895032813	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24238311505414	3.18146323059808
Merged-chr3-87364824-2	3.50524989045314	1.89190792555549	1.30800028000465	1.44641247748721	0.14806154422265	0.821466264966317	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr10-21465562-2	3.63545278748	0	1.35185332717267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68897302-2	5.42329752432912	-0.853552450656834	0.782418533331058	-1.09091542990799	0.275310096959607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52235968721117	1.35032549026822
Merged-chr10-14134124-1	2.21077747428522	0.236685653306287	1.15879103195629	0.204252230798431	0.838156397288007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.972964101170057	0.845523456341755
Merged-chr7-15930097-3	3.90028022772364	0	1.3500986137304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74702448-1	2.65696653000327	0	1.3852684763516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33005587-1	3.00229842655637	0	1.36008672315162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92865990-1	3.72824389970494	0	1.3274436288959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-53029326-1	1.95317530534651	0	1.35208733916159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5295949-1	1.76407107498818	0	1.42549227316054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49016844-1	1.84366379641141	0	1.46848092346298	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34909054-1	3.21674053796655	-0.186199996607171	0.794631080620698	-0.234322569489388	0.814734565683494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93369993037213	2.17343914874612
Merged-chr2-155033331-1	4.27094022578218	2.44449677887142	1.05617277698488	2.31448569035256	0.0206410952927005	0.192001852383887	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76764718560839	3.27433130487384
Merged-chr6-46142295-1	2.9982777725417	0	1.33666708153297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-14489120-1	4.82677769243627	1.07572310993135	1.01218750310385	1.06277059006624	0.287885999779307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71373566584316	2.57167923429536
Merged-chr5-59853124-1	2.51852411668151	0	1.39644664826705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129565174-3	5.67441645539984	1.91284799345357	1.09209010776924	1.75154777050482	0.0798516002285058	0.524398684605222	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.905469781553611
Merged-chr10-68141009-4	4.88034763934045	0	1.3253500480017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18188709-2	3.66597148606769	0	1.33035764377154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132794655-2	3.68947888850877	0	1.34704056290852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8018824-2	3.91351284672204	0	1.34702217496933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75532905-2	6.40308957545619	-0.458898142187664	1.00980311519219	-0.45444318331334	0.649509877066309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9091794834188	2.24815323407704
Merged-chr8-33618036-2	5.05651815325893	1.25028378716503	0.915166304021404	1.36618206075886	0.171881826682828	0.913971018505662	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.922325013803089	1.5268023559189
Merged-chr1-86500065-2	3.50478905457514	0	1.31612504553905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29707601-3	4.21652322731326	1.29897931532522	1.30985664640371	0.991695785101093	0.321345947759673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr11-74634683-7	15.0869376416731	0.682094168048517	0.398791816705328	1.7104016167727	0.0871916322684274	0.558864580893836	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9521010596045	4.6427340041085
Merged-chr4-141810065-2	7.21743722660093	-2.47599758473013	0.783838572186579	-3.15881059262386	0.00158414408923224	0.0270633933738483	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49942375019964	1.08186277552917
Merged-chr7-144923184-2	7.5806464379912	-1.69006983857856	0.665559137840815	-2.53932331852798	0.011106712852989	0.120201930786919	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41543527181231	1.76550025052025
Merged-chr11-44546767-4	7.08261451319689	-4.34386988957406	1.11900072149289	-3.88191875674465	0.00010363550351111	0.0032603479049611	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15835484410846	0
Merged-chr2-114137770-2	2.4695789046481	0	1.45913935207157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172306378-2	7.01165027732145	-1.49405149324055	0.829270614027029	-1.80164528679639	0.071601231345361	0.48405276882826	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39980998697491	1.11779166918352
Merged-chr12-17710275-5	12.5883947553876	-0.491146655263335	0.555020288810604	-0.884916579024256	0.37620162552772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24630574014185	2.69461614433468
Merged-chr3-96663785-5	12.7938646365845	-0.680329692874011	0.55308141908791	-1.23007150375066	0.218670329959535	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71875298485409	3.45131410606474
Merged-chr1-165187569-4	7.31450056260279	0	1.30069515890445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93262348-3	6.82042501165761	-0.163927474066362	0.805489605481267	-0.2035128361072	0.838734213848229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68892242138651	1.58492111464609
Merged-chr10-81082372-3	5.31729838465435	0	1.3175614258877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106697188-1	5.16663821828286	-0.979298668957318	1.01070718081941	-0.96892422211087	0.332582999094453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51472456233566	0.581381506691384
Merged-chr9-22368440-1	3.01083624952549	0	1.34549985765681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184025394-1	2.48011832389313	0	1.40787518273666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86016666-1	3.21649363742747	-1.52143614931183	0.907279900459201	-1.67692037324071	0.0935580536395084	0.589778561945525	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56689404881784	0.735627456805112
Merged-chr2-103801256-2	3.02213416500059	0	1.40992797440758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11279012-2	3.40255234513488	0	1.35346228762478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36746183-5	15.473494458585	-0.298040410280372	0.379005563533985	-0.786374763212803	0.431647963977917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.70046772573615	4.40944637909998
Merged-chr5-123155632-3	3.7814571552304	0	1.31885279171457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32650992-1	2.2494572502261	0	1.35869834016681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97002498-2	3.81494901938729	0	1.334230381351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60802266-2	2.21919548303239	0	1.41609971913959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53356966-1	3.40281507852114	0	1.35523032205893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97472828-3	6.28269088826504	-1.44541966653424	0.648761702231621	-2.2279670047758	0.0258827153509331	0.228465745957325	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85665395891554	2.26276386882201
Merged-chr1-44034548-2	3.0950830396494	0	1.39114859187478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-150981835-2	3.24797261525462	0	1.45437496342405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26444230-4	10.7441419643412	-1.3916946576142	0.545404588933084	-2.55167390567179	0.0107206806612933	0.117051561987113	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00872486080035	1.80435620208164
Merged-chr14-54939535-2	7.52291778024167	-0.0632490349543453	0.595827645803595	-0.106153239783027	0.915460770491953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45298391011392	2.93480637458641
Merged-chr14-17433127-2	3.46966872937068	0	1.35034899335139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44439346-3	10.4771089700949	0.988507357579916	0.605646159239773	1.63215326721583	0.102647202747059	0.633807437466626	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50156488740686	2.41260968248185
Merged-chr8-24431492-4	4.55218987543336	0	1.32140751964994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107611819-3	9.05968692556531	0.969377812374857	0.574072827245454	1.68859727610898	0.0912966330408074	0.578723776968342	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65639721231695	3.69230427811441
Merged-chr14-64858519-3	4.56071561286878	0	1.32619939757328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34181339-4	8.35863652620822	1.20213063810518	0.903866468165907	1.32998698418861	0.183522559779808	0.957788131249209	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.88941859177297	1.58756080918295
Merged-chr6-51612641-2	6.98644202352858	0	1.3088550756406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128614333-5	27.1112740677724	0.754516287714897	0.359586942076986	2.09828611505408	0.0358798783381743	0.29251476820526	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.72470286750404	5.23976736027991
Merged-chr3-84440081-2	3.10840197536666	0	1.42701143645647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37475519-4	4.94130685962567	0	1.31475318437792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92965295-2	2.98786810571016	0	1.38053065538051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102810770-1	3.89920570684192	0.713716841179509	0.828252272277597	0.861714317084662	0.388844745092311	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78204776886222	3.11131479907191
Merged-chr14-103065800-3	4.46328923040954	0	1.31032491538035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14123407-1	1.98903311046299	0	1.39510957264335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56488677-1	3.15717570587726	-2.63231726714751	0.952960344111798	-2.7622526828238	0.00574040331990094	0.0722620680682424	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42959314054859	0.666688015277142
Merged-chr11-120369830-3	3.70464673755887	0	1.30914896515696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36207110-3	3.44922023231712	0	1.34753085889088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47362654-1	6.62377149454192	-1.63269911525879	0.994253330171259	-1.64213592825237	0.100561837332202	0.623464309517085	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10072154210471	0.733321818366247
Merged-chr15-83038263-3	3.86086696710604	0	1.31530434107623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78553133-1	2.27169863658119	0	1.34441910354071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67264299-4	8.3178902659395	-0.695782391296582	0.695553362930941	-1.00032927504609	0.317151184254938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87361405790064	1.8133278414847
Merged-chr2-172397669-2	3.15292202756302	0	1.40296801838956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31272423-2	3.53523099705284	0	1.32254129756011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124085009-4	4.6853528707224	0	1.30583463271963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67386253-3	8.34726191249601	0.82247652813821	0.570978940473693	1.4404673619939	0.149735217534818	0.828220545541751	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21504706657705	3.22182750332539
Merged-chr5-99326631-4	24.2243435641724	1.41539834295052	0.341593740423348	4.1435136990402	3.42024629792072e-05	0.00134963414603821	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9219035229373	5.39307399004344
Merged-chr18-69365271-6	7.60834870517559	-1.83045931543878	0.832839977610502	-2.19785236617788	0.0279596283131288	0.242732811445425	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91999806187073	1.07938469868934
Merged-chr9-32590113-3	4.46331058562024	0	1.32156874370992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35162186-3	5.05134481157475	0	1.30613828549932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55925108-2	4.33886309530022	0	1.36372214955216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52983070-2	4.06127763046125	0	1.32837692267905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52258607-2	3.12693092403766	0	1.32198200330271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162624531-3	8.70958570129668	-0.000807981567899043	0.533020802688869	-0.00151585372244969	0.998790524181613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00097407419766	2.48211543439749
Merged-chr4-63307560-7	12.118353544201	0.641740606190658	0.436779404899166	1.46925564482329	0.14176346256991	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0059194041192	4.02460324971192
Merged-chr7-125582893-4	13.3137310954624	-0.162152553575719	0.457475053398417	-0.354451138638371	0.723000815777141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82681072172596	3.69147060056476
Merged-chr17-67223966-4	11.4335203254988	0.626019441933512	0.708735229214173	0.883290989538682	0.377079070866979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28433858737424	1.82306449654395
Merged-chr4-138884420-3	10.1833908442254	-0.852768838816176	0.558448853565544	-1.52703122832374	0.126753246221234	0.737496004592002	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48265737837597	2.39665735086605
Merged-chr1-43561312-3	4.82645038285467	0	1.32146459349506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42962902-1	2.35775615570034	0	1.35017011171809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113250868-1	4.57304072012804	-4.25905401066128	1.06338012127926	-4.00520371354845	6.19640572415377e-05	0.00216761417800082	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04724754368496	0
Merged-chr6-134261585-1	2.54928556137068	0	1.39383926286484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79552108-1	2.25568139012311	0	1.40548625987468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18548709-1	2.90004969734531	-0.129468101736069	1.11671659236769	-0.115936400176134	0.907702947031028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.854675866246237	0.581381506691384
Merged-chr8-88619378-1	5.68579405228786	0.366379321172078	0.658689047730807	0.556225008498714	0.578057045051389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55252111472081	3.22540532247685
Merged-chr4-28949299-1	3.50825596478291	0	1.35154756673747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128138522-3	3.86912486008912	0	1.32549704820445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45141923-1	3.02088669867894	-1.02885583476201	0.948926844908063	-1.08423092916261	0.278262421388961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43253913336213	1.41926493179619
Merged-chr3-86959317-1	5.09143409573258	-1.71372206277894	0.97161020239239	-1.76379587056544	0.0777663530044278	0.514813099324013	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25443445151771	1.65117231954624
Merged-chr12-28699847-3	5.68940825963928	-2.46749987195268	0.809833468004394	-3.0469225704306	0.00231197256487011	0.0362732675207688	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49698468914586	0.82780788634396
Merged-chr15-81178048-2	2.7986796861559	0	1.40430247659219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26641382-1	2.40137880480557	0	1.41630417366896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119266187-2	6.69755734378284	-0.140832202880964	0.567566058296276	-0.248133588720431	0.804031048056283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27169585754579	2.58209634937421
Merged-chr9-58554583-1	1.75786720896854	0	1.40235707583207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34235041-2	6.37701427038513	0.175994013049206	0.64916068436713	0.271110092289066	0.786306359643953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22689969187745	3.37098016293828
Merged-chr16-39464277-1	3.48263957159817	-0.966045306507969	1.06674075217581	-0.905604575936138	0.365145185908498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87402818466893	1.29606516661881
Merged-chr10-14208370-1	3.5210845363469	0.453659404455135	1.10106577195103	0.412018442505276	0.680325905651849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925662256979609	1.29358708977899
Merged-chr6-146405570-1	4.13689664569274	0.261048890802781	0.931961657958265	0.280106899863977	0.77939549119508	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55046814856131	1.68893048966582
Merged-chr7-6150881-2	3.64641508893486	0	1.30948722844907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40537216-1	6.42486014393974	-0.146960564694488	0.74439822211307	-0.197421971639483	0.843497337079321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47011712780951	1.80720849528393
Merged-chr6-54716986-1	7.33534318170253	1.87883265318235	0.902295187293874	2.0822815854945	0.0373167569041158	0.300344968180361	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50302329555532	4.21338313925882
Merged-chr6-129468363-1	1.81464465928706	0	1.47021427063249	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82174202-1	1.64611728991235	0	1.42386203818479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16145809-1	1.21164908130734	0	1.73459175031822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22111571-1	1.90811325211624	0	1.42083805318034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73587150-1	2.62792677028514	0.49426485435173	1.17239611351434	0.42158520371595	0.673327808104161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.930458768435973	1.80659218898308
Merged-chr7-132805046-1	3.49034345740706	0	1.36591835036835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139838649-1	2.19647367197069	0	1.3813108533295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112307559-1	1.82331309759858	0	1.48109149297383	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20840037-1	2.16590692448988	0	1.41963395530201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104777088-1	1.53124007622635	0	1.7659975272132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22300972-1	7.08491741075266	1.67432124641472	0.603457665603116	2.77454632172308	0.0055278761253635	0.070400427458196	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55445832658617	3.67525971766151
Merged-chr17-8905114-1	1.04558054021819	0	1.64526544696395	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79089774-1	2.04531416075233	0	1.37960378620694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140809256-1	1.3338992127551	0	1.65763436353291	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110584435-1	3.02278559171917	0.358529413827609	0.7196560265315	0.498195527598928	0.61834623444903	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72608828070603	2.53614350375723
Merged-chr10-23081343-1	3.64412835180929	0	1.36174563746007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83663341-1	5.9325863661132	2.30403497614787	0.716534018132888	3.21552769002039	0.00130204932700498	0.0233205937599331	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68244174771338	3.88847356644337
Merged-chr10-120587397-1	2.34444485760664	0	1.38069658532286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33072256-1	2.56751251443889	-2.23589068596293	1.15228715622462	-1.94039365438096	0.0523318671953693	0.383028471522021	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27106076364837	0
Merged-chr14-25628676-1	1.68308725206178	0	1.44014748783494	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21234183-2	3.18895012934147	-1.85573513995357	1.23213503623872	-1.50611344160661	0.132038054592882	0.758786273452331	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23217638230124	0.306240821987646
Merged-chr16-91614620-1	1.7804151809047	0	1.38023813696846	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104421972-1	1.51462524632378	-0.384844725392866	2.06606142992189	-0.186269740008367	0.852233236134406	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760882982080442	1.10459859746439
Merged-chr3-132791333-1	1.90306094100741	0	1.43731180094499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165689996-1	2.26978316109415	0	1.40078264808457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181950178-1	1.60371853667024	0	1.47195582902488	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55817795-1	1.44924261438405	0	1.54702222935402	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34571142-3	6.15229818883592	0	1.35975411021748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166349975-2	3.50368548140339	0	1.33218709387538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21288287-4	11.1509941725184	1.00881099557576	0.533110021368136	1.89231294693508	0.0584492969353851	0.416150333137903	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0936456483787	4.27842370825794
Merged-chr5-32761858-3	6.79302605057802	-1.59008422115363	1.04098372454934	-1.52748230702839	0.126641123513408	0.737239789843717	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00436265314701	0.609949614787909
Merged-chrX-103565525-3	4.87264592421784	0	1.32640839815267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122315685-2	4.24118583840583	0	1.33199484198561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124374770-3	3.79245248527547	0	1.31913738272404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156539408-3	6.3250490680403	0.531176201431179	1.04871792843361	0.506500544168779	0.612505307768904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	0.666688015277142
Merged-chr6-38900914-3	3.65372291473574	0	1.32356823624239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86447287-4	6.42174023931208	0	1.30031196963014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63614258-4	10.800377995961	2.14707705042751	0.611752628501459	3.50971446691936	0.000448588129814763	0.0101325405913845	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20499105916665	4.27362719736795
Merged-chr16-22349975-2	3.42707700320066	0	1.32193718167896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80446418-2	4.35553974551394	0	1.33131413694687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75473430-6	13.3150671827624	0.917885283396153	0.486598518036268	1.88632979627722	0.0592505264422786	0.419795870468944	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74147082541674	4.61599737297237
Merged-chrX-106055994-3	4.9177266282826	0	1.30205636425635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98274072-4	4.29478448931479	0	1.34901047095645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55918860-3	2.94446095961833	0	1.34680478786769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14215710-2	4.47074077479202	-4.32705004165482	1.25627968251687	-3.44433656125511	0.000572462620092328	0.0122168982274831	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18826076609565	0
Merged-chr9-44479462-7	17.957510379949	0.391900650721341	0.726434828124589	0.539484941454551	0.58955228473338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23131964739527	1.34389275758327
Merged-chr11-69067093-2	4.42978436930909	0	1.32404272564031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87588908-2	4.13297962757892	-2.3772048848228	0.973000972983194	-2.44316804487293	0.0145589563810451	0.146409597364693	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80058942203938	1.2481338739303
Merged-chr2-129383558-1	7.99443629309076	-0.0817996005030241	0.705662360177973	-0.115918894246242	0.907716821199282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8597887892619	3.13186090420748
Merged-chr4-133156608-8	18.9982145496202	0.793588946361864	0.388485074770498	2.04277846923897	0.0410743728638416	0.322369201196324	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02346050270286	4.62770296858885
Merged-chr18-23197411-3	6.09190428696895	0	1.31414082820682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161976086-3	15.1218827629069	0.663456685093248	0.406707960661535	1.63128522002396	0.102830150559865	0.634637232573189	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.032165771952	4.6741729311536
Merged-chr5-103854340-2	2.37995199311292	0	1.44094367088326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97961214-1	2.4016494625035	0	1.36343144633134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48916027-2	3.3726203756257	0	1.3522859746361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101520215-1	2.21299002222028	0	1.41670062742054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108113833-4	7.8411487874274	0	1.29012606469385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39499291-1	2.13069689171503	0	1.36368627135105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83742939-3	9.00635713724126	-1.38155528648813	0.794850761447735	-1.7381316764065	0.0821876145320068	0.535350065710578	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35562415617515	0.845523456341755
Merged-chr19-37546475-1	4.53131151201981	3.30521084015223	0.853875723435413	3.87083359959493	0.000108463814053524	0.00338362612364146	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	3.35932241451806
Merged-chr15-6426057-1	2.07179357114543	0	1.40646102102496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59879608-1	2.78722184278469	0	1.36490839613771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155082632-5	11.7854527738885	0.671668937069034	0.485737033563674	1.38278305061742	0.166731397572854	0.893051631622597	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71320252473627	3.3175825790915
Merged-chr16-37685394-1	2.82227808189771	0	1.32269198863779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171160828-1	2.28009168211782	0	1.39156618270207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32388035-2	5.79466366490889	-0.889083459253309	0.564004539692138	-1.57637642374052	0.114939078446327	0.687551173576865	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52948483869667	2.23192622730314
Merged-chr19-29487608-1	2.7052574088103	0	1.34599423228423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99585100-1	3.28248369777848	0.198413292000041	0.96596136906991	0.205404996880037	0.837255716565816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50200329760273	1.31470332505763
Merged-chr12-16533036-1	5.82872305009939	0.562000481328859	0.90674679401335	0.619798696879192	0.535390326725154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35500207754737	2.64913022529739
Merged-chr8-41141894-2	6.75050926964104	-1.53984726197687	0.831090975578953	-1.85280228906852	0.063910702030427	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17876334056813	1.34805514843284
Merged-chr6-134081904-2	6.68808769285707	-1.43737240875153	0.760232257840866	-1.89070168218567	0.0586641777822597	0.417225659703912	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30876800832107	1.46894927517136
Merged-chr10-22335610-5	10.223085946461	1.48079939684333	0.496323020906962	2.98353961929345	0.002849351435727	0.0427343857973414	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98042678897186	4.33442556868536
Merged-chr17-47328962-3	7.77297620023332	-0.0894178156359272	0.693934938549916	-0.1288561948225	0.897471439082138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37004437631277	2.9378031202644
Merged-chr2-90554416-3	9.10289056896567	0.207025579740112	0.67325046234424	0.307501578267402	0.758461621902942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85212343537668	3.86471534654469
Merged-chr10-26564686-4	9.00708500215226	-3.35346414025586	1.03158617757471	-3.25078429040215	0.00115087141212393	0.0211784971266264	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95915373462221	0.382164212378408
Merged-chr19-5232839-3	4.59019977136681	0	1.32978750834691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122550659-3	8.85662777355482	1.45722563030423	0.524721620929692	2.77714043443139	0.00548394789776144	0.0699500408602614	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26063316002437	3.58212787671401
Merged-chr7-98953808-4	6.58949947442366	0	1.32341202975317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-36724368-1	4.90594270461364	-3.33196340679288	1.00106393410878	-3.32842218490195	0.000873394002333908	0.0171184176594216	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85990671035602	0.992113827166316
Merged-chr5-23453712-1	2.96868760843922	0	1.34452729829407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30353575-7	14.2876305449082	0.292362148338846	0.412760025519357	0.708310229342049	0.478752626054547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08072545282644	4.39987897949172
Merged-chr16-5473647-3	5.57743819905907	0	1.31443209129792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60844855-2	3.18163722254138	0	1.37332941353853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57527058-3	6.69563277476028	-1.35583842237106	0.822844616446916	-1.6477453887049	0.0994049297848898	0.618050860297184	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04608186428442	1.207189364431
Merged-chr18-4924240-1	2.04484705746409	0	1.48121505589509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124666555-3	3.82170288639137	0	1.36142009911779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94264622-3	5.34557410958187	0	1.31866983365146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9940633-1	3.45639162364716	-0.702503907197306	1.05076991893493	-0.668561113654042	0.503775485189659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30143208406439	2.30889993389418
Merged-chr8-11393736-1	2.23399155074504	0	1.37450389691862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16628306-4	5.07313224762597	0	1.30032830118561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4438218-2	3.38645731224689	0	1.36223605530917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112510587-1	2.96128570178359	0	1.32662865801821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33895905-3	5.59691270109469	0	1.30413392258389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118659297-3	7.54789243006751	-1.77583713176888	0.704266748202256	-2.52154050479022	0.0116842222747016	0.12477566812448	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82891978522645	1.93885859565466
Merged-chr8-88631271-3	5.87811614470388	-2.35745252143265	0.934224464511519	-2.52343265562554	0.0116215317921405	0.124332124507075	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0267566204321	0.733321818366247
Merged-chr6-38065707-2	6.37738245000439	0	1.31783059670109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26443820-3	6.89411398184365	-2.26683400544459	0.892349956819012	-2.54029709770508	0.0110758338796913	0.120026772919122	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97368656466265	1.31495854024319
Merged-chr3-81119409-1	3.85797944877065	1.91494001000466	1.47715089838001	1.29637399408874	0.194846667184073	0.999250534752035	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53667314984995	3.23618138081504
Merged-chr3-65971776-2	3.67473678230758	0	1.33382828013685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151948234-1	2.7075767110907	0	1.3451385597626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151000971-3	4.49349150991522	0	1.31312277974686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39320970-2	2.74581016454864	0	1.36431506093341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145142302-1	4.70902298843776	4.05748872996799	0.927321133274701	4.37549472817421	1.21157370453091e-05	0.000589073625716344	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	4.0206958896493
Merged-chr16-64801839-1	2.02265263367961	0	1.46494294149997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49818136-1	1.47724946773756	0	1.44193005146569	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125102876-2	4.80476322942045	0	1.29883063291418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54492560-1	3.22914524184483	0	1.33911866361557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136329238-1	3.5546256585993	0	1.31739777530986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35502326-2	1.63772848777419	0	1.89625908519338	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45589904-1	5.32062133289139	4.37446345896361	1.04376631987035	4.19103718493905	2.77682140933696e-05	0.00113978751139782	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	3.15813062208874
Merged-chr11-21282170-1	2.70454672625389	-1.28719115007783	1.31142992758449	-0.981517291166829	0.326337711780751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0
Merged-chr4-72438757-1	2.18846485428428	0	1.45833109906991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40812928-1	1.62986438083251	0	1.40159809381316	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28735979-3	4.93530186869288	0	1.30686709376187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66397960-2	2.14090578646018	0	1.45282502411532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55704309-1	2.55308333504541	0	1.45471001845718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118004275-1	1.32082619684184	0	1.67942701395662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10959728-3	3.29319527988767	0	1.36426218349273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39522733-1	2.11760475296052	0	1.37423169663909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119807491-3	5.63191727328582	-1.87369373237528	1.01771619010015	-1.84107686465212	0.0656102954725866	0.453018846994045	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50712694531539	1.08186277552917
Merged-chrX-155543984-1	1.66381097402702	0	1.49239275914095	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65703396-1	5.2955202878477	1.29700710280321	0.739926430500333	1.75288656998802	0.0796214793155164	0.523435129512247	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54523777598426	2.42580743154785
Merged-chr9-110999468-1	2.82517929735234	0	1.34472613246671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142563686-1	2.07757339051426	0	1.38821177607119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147072574-1	4.37597490092423	-0.0129617396660387	0.764522032084183	-0.0169540433396057	0.986473278598449	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98722434329986	2.56253623382279
Merged-chrX-86985906-1	1.26837150422341	0	1.6005200807847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116818919-1	2.46968527818501	0	1.35029094848652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8936172-1	1.83238657242501	0	1.50237058553686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28416815-1	1.87452978881201	0	1.43898666385729	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35378966-1	2.57909676219731	0	1.34081233115508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43046094-1	2.27925068668092	0	1.56932637981977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121859890-1	3.16124579586545	0.947934237123415	1.17664232488936	0.805626499295398	0.420458241405099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07945930499031	2.18907334447161
Merged-chr7-74684822-1	4.61683421915216	-0.343179956464244	0.713020059052025	-0.48130477131388	0.63029990647516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9841434112594	2.1098084132927
Merged-chr18-62254022-3	10.3718130525366	0.627400284496738	0.558339178912332	1.12369023739108	0.261144459435812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78081979742954	2.82253684862402
Merged-chr2-179875414-4	11.3087665639372	0.745269908951287	0.429286418737584	1.7360668225725	0.0825520198739366	0.537171256067879	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4821386625844	4.39500786392504
Merged-chr9-53603573-3	4.43107515943822	0	1.31611779487457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11529362-2	6.94208805759594	1.09335673461821	0.728216323550124	1.50141750364506	0.13324760941883	0.763253706616659	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38695859814083	3.04983561184268
Merged-chr9-47652720-2	7.22508439643006	0.963674923809834	0.77632662841387	1.24132663822023	0.214485107941172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55235099533457	2.07949698712919
Merged-chr3-85971101-5	11.6289828732985	-1.98782166965189	0.74199087626316	-2.67903788745089	0.00738340390088125	0.087516036877741	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2229000718899	1.13132003301738
Merged-chr12-77052937-3	3.75942229605943	0	1.31679420784104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102436178-3	9.23034699920127	2.80678601554863	0.711598292945499	3.94434056879279	8.00198691809389e-05	0.0026574812587299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961036207701452	3.70686828879192
Merged-chr17-27869307-3	9.03683542497502	-2.30810130821724	0.751294413189984	-3.07216620767494	0.00212511360588511	0.0339612799437928	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01543359648014	1.90601478140672
Merged-chr16-23337481-3	4.95697152355998	0	1.32769353377342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33821204-2	5.47825196259968	0	1.30029803470195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50331947-2	6.4013888199701	-1.85162828317779	1.03976342735379	-1.78081689975402	0.0749423676828458	0.500785761182457	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89029914426393	0.729295484888209
Merged-chr2-130529612-2	6.40305770395753	-0.659428571090974	0.661227037381286	-0.997280107756279	0.31862856650873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02821219158527	2.0509200531463
Merged-chr7-105779134-2	3.41247137924107	0	1.35584227935159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-29698208-3	8.09086584637096	2.07342348201841	0.712515068624147	2.91000650136726	0.00361421237922727	0.0507967334436695	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11459295742963	2.56850392438658
Merged-chr19-34080595-3	3.5724257103129	0	1.35585109532421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51156868-3	7.94930564592415	-1.13260620815037	0.576272225414085	-1.96540134714376	0.049367803701894	0.367257342976317	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59793601850217	2.23349578644154
Merged-chr1-157447027-1	4.14338737284534	-2.04398583673586	0.961022213584651	-2.12688719141227	0.0334294573497322	0.278065341137424	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1347806958141	0.989878296978726
Merged-chr2-128363424-3	4.57676941554901	2.86385047927594	1.10221174087885	2.5982761506355	0.00936931111308802	0.10544621466747	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.905469781553611
Merged-chr10-61399568-4	5.04486304399068	0	1.30404503294105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77928191-4	10.4315087875831	1.27153838542427	0.526873511179717	2.41336555822892	0.0158059578501009	0.15590281081852	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75075195397226	3.77341703873268
Merged-chr1-95468302-3	5.05952449933086	0	1.34096258073414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35693818-3	4.67267800990395	0	1.33133993296143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79467116-3	4.17168611192242	0	1.30787436696006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91112233-3	9.29370498968683	1.41738041992099	0.647390677977523	2.18937415711476	0.0285696564025288	0.246798464296799	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55577629808023	4.33629907314455
Merged-chr7-45023898-1	1.39784897983128	0	1.64443853695236	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35303339-4	4.84399837114399	0	1.30563244615242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8606032-3	6.1005065254732	2.5317374873903	0.852478464292342	2.96985506782502	0.00297940277494217	0.0441989447476128	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.938812813716106	2.31711242604998
Merged-chr19-55286249-3	4.12268987787022	0	1.31283609897018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83568279-3	5.37108935261573	2.51580744042451	1.08371503881912	2.32146583770388	0.020261715797881	0.189118994504833	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.6995072319729
Merged-chr2-131767659-2	3.74706611453191	0	1.36527741819702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81351166-2	4.69985193900516	0	1.33504801560776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36832113-3	14.0681837555014	1.91113190149229	0.533677692572823	3.58106011941188	0.000342202893970807	0.00826981890141137	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26342182319673	3.41497550021239
Merged-chr11-98767513-3	3.69734518055187	0	1.33294150645877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28589558-4	9.45965834070599	0.0793665715435175	0.604161937762027	0.13136638802092	0.895485476674342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9053508978527	2.91409217719217
Merged-chr4-133821003-6	17.8334846834862	0.558284926581106	0.383278547148763	1.45660363913981	0.145225822570969	0.80944443890503	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09252543680597	4.60152461118505
Merged-chr8-124704654-2	6.49737491414067	0.610911116685578	0.82471261358397	0.74075636363888	0.458841177541958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23929668422532	1.47954504644696
Merged-chr11-115291148-2	2.86958199506897	0	1.35709126430445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93207834-2	1.97800607606154	0	1.43837645603405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82007887-2	4.00634048299974	0	1.30478082329699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60863038-2	3.48131775240516	-1.57830718296792	0.853306884695678	-1.84963605858027	0.0643660220380737	0.446408626204624	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.837024550754	1.48219169541115
Merged-chrX-10903071-1	2.02256405764117	0	1.42418187730003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34124091-2	6.19049859369726	3.31214324874727	1.07035687872467	3.09442889057125	0.0019719219845477	0.032062008958013	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	2.31260716574699
Merged-chr9-55544257-1	3.61399963556069	0	1.33474770980314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43278121-3	4.93170872153351	0	1.34971116932943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64381774-5	8.86728092931852	1.05494943353034	0.604869471244556	1.74409436032491	0.0811426373110975	0.530396782452467	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18090411836504	3.19663145017504
Merged-chrX-163261463-3	5.45833679320788	0	1.32844119274709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164075458-3	4.41269170024038	0	1.31483801375556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127652586-3	5.25906702142743	-2.42520411215269	0.963057992028602	-2.51823268404035	0.0117945374754812	0.125765902084147	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59832479909642	0.581381506691384
Merged-chr6-134333234-3	9.57382308689976	-0.79977759476034	0.506201508425454	-1.57995893226011	0.114116271687346	0.684320628584135	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20628139851884	3.48762807179304
Merged-chr14-14602122-2	4.54489066550419	0	1.32854607306278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43285624-2	3.25108385145293	1.41599550320463	0.839599437099496	1.68651316405877	0.0916970017276482	0.580621674811449	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56427445203045	2.41684433297733
Merged-chr1-181921700-2	4.00793504292076	0	1.31512454360831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36657873-3	4.54769548078773	0	1.33767763233848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114752512-3	4.08768693049129	0	1.32154539000106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105265244-3	4.61539130599083	0	1.32060701259043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74697824-1	2.99041326185585	-4.43293550336301	1.25411512925259	-3.53471176606002	0.00040822018473611	0.00943599440812376	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85381191273429	0
Merged-chr6-51510230-4	11.6102955707278	0.454909571813731	0.455327354345382	0.999082456769479	0.317754748775083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29065601854157	3.66921217619248
Merged-chr19-33380545-1	2.6947964958974	0	1.34550079439277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129476928-2	2.67068702688737	0	1.34673770665257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113956701-2	6.97092037132666	1.87177726788544	0.685716191009091	2.72966759780159	0.0063398214289004	0.0782343332211936	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41055590913185	3.52648357102452
Merged-chr11-51681771-2	5.18454180167942	0	1.32241059894368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169008888-3	5.50859243449307	0	1.3142940950579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122925289-3	4.2038120416844	0	1.32251440938355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121122523-3	8.29348477164607	0.974086693499765	0.89314085735425	1.09063053770186	0.275435486683916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816279004064202	0.843323834477631
Merged-chr9-62998792-2	3.46242037880831	0	1.34735918634293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104369219-2	3.23619143769604	0	1.32944675521206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101763164-2	4.74814397771654	0	1.30294922453407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166083661-3	4.80341168329357	0	1.30901818820884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116620826-2	5.54422709786149	-2.6901089568621	0.918605994562078	-2.92846875895311	0.00340636062656174	0.0488140441893209	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26056660068579	0.73596151290311
Merged-chr1-86416489-3	4.22548157219494	0	1.3151131188548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121340523-2	3.57955329365817	0	1.34713901305738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54748434-3	10.9407804766547	2.75718145529904	0.566186239571404	4.86974296193809	1.11743509947684e-06	8.74489988148668e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55600946470082	4.16663346935147
Merged-chr2-160304189-4	7.46893619076925	2.26279325093642	0.867034488327996	2.609807662092	0.0090593142289395	0.102811731087926	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769022381030345	2.21093072451714
Merged-chr12-51705759-2	2.63730176495742	0	1.37526220677291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114984847-1	1.85100343683429	0	1.44022939472077	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9094175-1	2.84099679375309	0	1.36185205662637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80651566-1	1.89217417281125	0	1.38139851046629	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65889698-1	1.57719970633022	0	1.61424617653978	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38427230-2	3.53537365464203	0	1.34842324727294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46168155-1	1.21297593801778	0	1.62584348291715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76473868-1	1.9566166043919	0	1.37848303626358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87277654-2	2.98504052781701	0	1.43138216944751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80737162-1	1.70522017802425	0	1.48989022860937	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95892249-1	2.28748489938241	0	1.59968505588498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134171439-1	2.4759878308648	0	1.3737810179373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8736334-1	2.53896052727286	0	1.36479215340008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108704974-1	2.26723925698806	0	1.40508446837403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90343103-1	2.94634057165869	-2.82409143272639	1.20396497067568	-2.34565913586462	0.0189934686117152	0.179947763068328	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57525064037434	0
Merged-chr4-132539639-2	3.0297193233721	0	1.3218963077425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35183374-1	4.89207743270375	1.18476093136555	0.99372847004301	1.19223808825189	0.233167902711183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42598043607075	2.73228483412235
Merged-chrX-99531376-1	2.01298951794257	0	1.45078994168122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107340918-1	2.35202050462915	0	1.33997190306651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56927022-2	2.85186854906953	0	1.34866812700258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56620874-1	2.63685005540929	-0.830572664878427	1.27405853588941	-0.651910914201923	0.514458643693485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09677657580095	0.469435083901436
Merged-chr2-6694196-1	1.46877393258868	0	1.53494131634271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34654114-1	2.37299282996222	-1.21146250169039	1.28415017555041	-0.94339628242556	0.34547824399014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65782833081092	0.733321818366247
Merged-chr4-40820995-1	1.63169735371158	0	1.43836797069501	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44839244-1	1.21206715352211	0	1.64832442338898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116808343-1	3.1390144297003	0	1.33404431920601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51848609-2	2.20263485710906	0	1.3728024436495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77369973-1	2.60966053627774	0	1.42986411157165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70703509-1	4.08924300556944	-0.0961016764760818	0.835391895334588	-0.115037836747975	0.908415131721152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91124578629657	1.52944205045577
Merged-chr11-119905106-1	2.0846871708098	0	1.35469034689331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89395568-1	2.19069046857803	0	1.37193920745185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14237526-4	4.60501712610687	0	1.32554722724015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14352265-3	4.22445964525855	0	1.328115218034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62844331-1	3.94073723888373	-0.628244383395988	1.12384191245262	-0.55901490808875	0.576151545852539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85145427943326	1.59225717122037
Merged-chr3-116450922-3	5.06658698424433	0	1.32466551986762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6325841-1	1.93456135279112	0	1.51368283696681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17703899-1	2.77451902643099	0	1.37084923989446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77100621-1	2.24124278507714	0	1.34370961511375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-119720307-2	5.29932876008496	0	1.31758789874363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32909905-1	1.71230578350405	0	1.40435834522427	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145112040-2	12.0402014386734	0.217305956836228	0.557856615252464	0.389537294879768	0.696878727574061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98127219843918	2.79404781306318
Merged-chr4-102955759-2	3.56330803624189	0	1.35854432650069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146946126-3	6.08146008775684	3.43012943839694	1.09035300360466	3.1458889250152	0.00165582877687785	0.0280097818415377	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr13-81107631-3	4.45705400166602	0	1.33616235227371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117495039-2	3.19765545026866	0	1.35339110419907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-86847442-2	7.929641670531	0.381826989907198	0.603346505441668	0.632848597718634	0.526832517594308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54211420632893	3.76886419358486
Merged-chr1-131967502-2	4.3646670832027	0	1.34802087487401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80220472-3	4.1319570331827	0	1.31177448699676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30764514-2	3.48187172699251	0	1.37353590280759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87690380-2	2.52628516382203	0	1.40545023469383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65547924-2	5.06028747400611	0	1.31952499064881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55506063-3	4.53829592117655	0	1.33230157417311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80011387-3	6.90965785100451	-1.25248263810091	0.66927662352054	-1.8713975568317	0.0612899973029447	0.430727887135043	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40138585796774	1.53609721040214
Merged-chrX-150956786-3	3.8758782722437	0	1.37325101751994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62252483-5	9.59437644557772	-0.141476753660169	0.530151505048033	-0.26686098655393	0.789576195820776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51822581157887	2.70122227302391
Merged-chr12-12323756-7	16.2449217987976	0.099074832664108	0.440234673755258	0.225050043920864	0.821940343235067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32298238929823	4.44214509310783
Merged-chr6-98499944-2	5.17573172053855	-0.162606141160119	0.85087029635516	-0.191105673634005	0.848442802644368	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91835008076076	1.26501898168246
Merged-chr5-24047938-2	6.43504652730092	0.241833601457818	0.952935166436913	0.253777602060851	0.799667378058675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11438437634714	0.82780788634396
Merged-chr19-21714649-2	2.4422273155045	0	1.36222564546784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21123693-4	4.82882690166443	-2.2452006848561	0.924841159835648	-2.42766085935783	0.0151965461340268	0.151146652005193	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76885983798475	0.683637474991079
Merged-chr15-78826747-4	4.45135584996951	0	1.30874571034591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31196152-2	4.62396961088356	0	1.31529563485132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17683511-3	9.84597114652301	-0.23050862314123	0.532449979198944	-0.432920710200841	0.665072373755634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93310276957392	3.60322580960118
Merged-chr2-129047052-1	2.79014461362861	-3.54881237278221	1.32767402656584	-2.67295458205322	0.00751864291678114	0.0886207142929257	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64755734431151	0.306240821987646
Merged-chr2-26644069-3	4.67669637828401	0	1.31833977940877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55970059-1	6.40943465355875	0.24759521646581	0.680090733462164	0.364062035083712	0.715811685878242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80965784415742	3.13874660884003
Merged-chr9-40811494-3	10.7592203456274	1.53699287653054	0.550351061254684	2.79274990953323	0.00522620802904618	0.0674524567540087	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15243502782713	4.73718980273697
Merged-chr7-45081288-2	3.92209089650515	0	1.33958506614981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12006848-2	3.87312336793613	0	1.3688624244185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127146081-3	5.0004835500408	0	1.33766494703409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133592828-3	13.8909780971181	1.99535480190874	0.426191715191107	4.68182447191404	2.8433289974469e-06	0.000185059936919487	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51086076123113	4.75088124529944
Merged-chr8-120599728-2	4.17805156397304	0	1.32792773215686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80450665-2	3.47231071145193	0	1.36244359146236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88176112-2	8.7971297671657	1.71166651976624	0.65879630060057	2.59817263425107	0.00937213624075946	0.10544621466747	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40302942883946	3.28901212020039
Merged-chr4-126741639-3	4.40401784078284	0	1.31057013388469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45101067-2	4.24872662398108	-0.169074845452719	1.05646681570907	-0.160038008708529	0.872851133452675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30262826049765	2.70275322934241
Merged-chr11-69134078-2	7.94197024060683	-0.270532168362386	0.54744353736599	-0.494173645128855	0.621183550737605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29882644609033	2.56493919553409
Merged-chr6-143175471-1	2.38768392423303	0	1.35522569321546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132387753-2	3.01589105729406	0	1.33076333602644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-85027452-2	3.58119936259094	0	1.35818041264162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8563989-3	8.43329064215289	-0.335834348943666	0.717044876734127	-0.46835889892034	0.639527955068003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81409040623232	2.52170971140921
Merged-chr19-32495241-4	4.77735735904559	0	1.31931841603386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-57362768-1	1.80562226974321	0	1.37056112976339	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111368389-1	1.35047721017927	0	1.49003123284226	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63859063-2	4.58792037774908	0	1.31649228119698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36153461-2	2.85829032050454	0	1.38308494001793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30291281-1	2.59974971450223	-0.459387228931333	1.18998233003757	-0.386045420453283	0.69946303053542	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40166058953086	0.773587911294612
Merged-chr12-30634788-1	3.62646930186277	2.10050265252003	0.959514855737377	2.18912989200758	0.0285874004584753	0.24690355146174	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.836760058890005	2.11086637835816
Merged-chr3-38115063-1	6.11010371269748	0	1.29748304488348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73007719-2	4.35382245922463	0	1.309370536463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33923155-4	4.6532108149396	0	1.31562137558342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62243404-4	4.59386290671654	0	1.31249290650144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141783004-5	9.87087726563155	0.553211378822945	0.740480919026009	0.74709741278764	0.455004761810996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86007312390547	2.38519792123149
Merged-chr8-43367866-5	11.9136102636556	0.820016926488268	0.499377123901704	1.6420794770921	0.100573534253127	0.623477674727715	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10918825761469	3.8390220256214
Merged-chr2-27770392-2	6.48649992409191	0	1.35667138991738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57721207-4	5.39211223556585	0	1.29886548801355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99450908-3	3.76638743477984	0	1.31382476531522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70645830-1	4.59770330936648	-0.271001206768976	0.856435278080465	-0.316429289760661	0.751676688188252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96317105187099	1.82866868473699
Merged-chr11-52043414-4	4.9420443229074	0	1.32507274493633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101524391-3	3.71226648016521	0	1.34886216493698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118228903-1	1.65689915684652	0	1.42626726491769	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120529417-1	2.97042376394685	0	1.34453029931249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55806537-3	10.2694652087896	-1.19250304403876	0.541643139785382	-2.20163970785502	0.0276907687224589	0.240942872561624	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28747927077762	3.21282271434453
Merged-chr13-105327098-2	4.05436014658222	0	1.39869419235924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47179671-2	5.42790144480289	0.0393688247331276	0.789346127058882	0.0498752364565549	0.960221811182279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88583867245918	2.19238104328308
Merged-chr6-146430164-1	5.05815886101772	-1.07107781081901	0.717416949058814	-1.49296418522613	0.13544656213367	0.771521186295919	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66889148781563	2.60755374384053
Merged-chr17-34295878-2	22.7002051220351	1.65352024578101	0.472049634205329	3.50285250949219	0.00046030426391465	0.010350668420429	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05211474029114	5.56273658385892
Merged-chr10-77626926-2	4.01008749480222	0	1.32748028122547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40134934-4	5.01437673701844	0	1.31262127240526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5541368-2	3.09018894400825	0	1.34649444432099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21909627-2	3.48788923174131	0	1.39329655239662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4279271-5	8.91211514212216	-3.01075741936977	1.08682071701813	-2.7702429409243	0.00560144956129404	0.0710466465513044	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58101466554223	0
Merged-chr1-53777490-3	6.87089764371927	0.0136848602880163	0.639385669218561	0.021403138898533	0.982924069661309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55666900368489	2.92663920588679
Merged-chr11-86840689-3	3.93976072845283	0	1.32695287868359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25813751-2	3.42875674123166	0	1.31644858299738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38452348-2	3.7932190241828	0	1.33106364188083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49422260-4	5.6443551716765	0	1.34564179618991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129842547-3	6.5030786879082	-2.13591219653354	0.932998177456986	-2.28929943073979	0.022061960764023	0.202423601247662	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23281162599097	1.20539659680455
Merged-chr16-16912087-4	4.92903333118563	0	1.30980239678026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108880661-3	5.07513477780486	0	1.32484397658169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33668418-3	9.23064630661053	1.28668268599133	0.973409666867668	1.32183060204419	0.186224565592368	0.968178093977158	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857056700897293	1.34574950999398
Merged-chr19-53259533-1	1.93592247940469	0	1.45409130472686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42909039-1	3.93494844239053	0.532001848072062	1.0879591586695	0.48899064255561	0.624848321670544	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0.683637474991079
Merged-chr16-64935670-1	2.28579354500302	0.284109527041042	1.37094304057838	0.207236565365386	0.835825112073653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925662256979609	0.793480537552656
Merged-chr9-84499814-1	1.92073949094843	0	1.42542919885688	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85112355-1	3.53382704267695	0	1.32801060099513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60261705-1	1.8049400222744	0	1.48077720027262	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73693612-1	4.42184949443849	1.90195353931536	0.715878866072099	2.65680917464576	0.00788840808436445	0.0919999847726003	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38999833332037	3.26946532212348
Merged-chr3-101617662-2	4.68497309441834	0.177672433798627	0.739133159505607	0.240379465477464	0.810036095758675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62186405058032	2.0292145465841
Merged-chr13-5844461-2	2.41705353569146	0	1.45207497806071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77044049-1	1.67769271128488	0	1.58279624661899	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6191669-1	2.41627809599713	0	1.53125209323491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106926447-1	2.82816025874133	-1.84775170132437	1.30721936818975	-1.41349780020713	0.157509407724569	0.858289672879392	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46520149043035	0.735627456805112
Merged-chr19-41360764-2	7.14398386701823	-1.22726494214001	0.66021286719183	-1.85889279522845	0.0630423355433105	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33407909244568	1.95040317292908
Merged-chr1-138517147-2	3.32558945273629	0	1.32988548491326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112991326-1	3.19069816515746	0	1.35115983171601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169883614-1	2.00242884680437	0	1.3900230129169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93822188-1	1.6756665564811	-1.47458126379717	1.4060750526548	-1.04872158923026	0.294306274866375	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.655578355042913	0
Merged-chr10-8879964-1	4.6241381417373	1.04294565484356	0.804040018938113	1.29713152365347	0.19458593666739	0.998461925203555	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22153005421156	3.12896980320063
Merged-chr15-6436003-1	1.71441765086941	0	1.51810618067136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-100511348-1	2.24347392596044	0	1.34493904647103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11798404-1	1.95876985220898	0	1.45074111217474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163764264-1	2.59250356924974	0.867261055034869	0.907314521262772	0.955854926500948	0.339145533746504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76477824177871	2.24152926278481
Merged-chr1-43910890-1	2.97366001447539	0	1.37215853067945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120574757-1	1.3681696115774	0	1.43191408917875	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122853026-1	3.12402793251878	0	1.35373682086362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14067673-1	1.77135219551104	0	1.3973619966783	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87474408-1	5.96483769386598	1.00639401669559	0.670608481835014	1.50071769736905	0.133428593712186	0.763888635422861	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9048914536057	2.22258626807024
Merged-chr6-100341965-1	1.65002992370735	0	1.39543853956479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12090537-1	3.10865846698135	-1.61069798727418	1.21921030187432	-1.32109939097301	0.18646822611519	0.968982322363675	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34926645267405	1.56763655772049
Merged-chr4-13281573-2	5.766284578196	0	1.31297695213699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13055352-1	3.07848499854381	0	1.36514201722019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-42962902-2	2.86275683593327	0	1.39193723811706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78429874-1	1.96759454266669	0	1.38897591073514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-31628989-1	3.72656806505207	-2.31651209587226	0.934121237419293	-2.47988376998269	0.0131425215718165	0.136016980461185	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55541504078144	1.50243936158991
Merged-chr12-34712694-4	10.6030000023957	-0.379285547072887	0.509226329807862	-0.7448270540449	0.456376277650971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53395976365267	3.2764785336446
Merged-chr1-173452564-1	2.18507297498748	0	1.39435341265095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111130952-1	1.75762720661969	0	1.51450786291978	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64240932-1	1.96900393310157	0	1.40229855732971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-99974971-1	1.71227179132104	0	1.67080206928051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144935806-1	5.29567121354152	-0.618674280789792	0.797024626083691	-0.776229818430765	0.43761330289963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44423834143728	0.843323834477631
Merged-chr5-57478065-1	2.85313259695221	0.233638513233148	1.10450817673881	0.211531718962003	0.832472383984491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03337619474158	0.989878296978726
Merged-chr4-126030916-2	3.73710798093021	0	1.41215061383355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163851424-1	2.17546982543746	0	1.38020562456262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35722953-1	1.57174161841166	0	1.48821353266743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47792668-5	10.7620072338524	-0.908534218974675	0.521517627756071	-1.74209685468125	0.0814914978850433	0.532407860507503	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81818893763123	2.99059730437749
Merged-chr16-35817494-6	15.1168227912503	0.609594924568972	0.534864621325214	1.13971816467988	0.254403736974029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07043482715328	3.07573628624387
Merged-chr3-127295036-6	17.489032852782	-0.448656467019405	0.409855787358154	-1.09466910278699	0.273661629427833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.54422522408722	4.24696817792736
Merged-chr4-150515682-3	5.96054012345279	0.521686423956277	0.70170292777821	0.743457670339333	0.457204640061534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5120359307958	4.09283891567874
Merged-chr10-9893692-3	5.66426642461186	2.28456360611062	1.00674262436518	2.26926281933397	0.0232523481238747	0.210917259925418	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.9450324219075
Merged-chr17-87140987-4	12.4049915752429	-1.1251612931254	0.403783088714821	-2.78654882924051	0.00532725914712366	0.0683946196066603	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.80352237617291	3.05962622664223
Merged-chr13-89904780-4	8.00848404767382	-1.45970240228449	0.677172432874313	-2.15558450317989	0.0311161236937272	0.263861175563237	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08135611510287	2.3356278069727
Merged-chr4-97885734-2	3.10727023997253	0	1.34040391025684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81796731-3	3.33365428324381	0	1.34006305053119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29241886-3	4.29696863223753	0	1.32906620974601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139434252-2	2.95005561180453	0	1.33092170257608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78485484-3	4.50446003904984	0	1.31846510121985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40082656-1	2.76561390575547	0	1.31575427730481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107826660-2	8.04400782369424	1.84585898621805	0.778780377491371	2.37019195599662	0.0177788521376831	0.171000422694883	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3478799155145	3.03053138243821
Merged-chr12-51355473-2	3.31554932729703	0	1.36790287508419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43806144-4	4.50321085476246	0	1.31809018905836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45757075-6	12.7441862266302	-0.369735447201665	0.417235477979394	-0.886155340845502	0.375533825149506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88296425456174	3.31769483219531
Merged-chr15-85710399-3	5.07712377242052	-0.847746190973261	1.09908523262118	-0.771319790141745	0.440517404909459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.861734849989446	0.469435083901436
Merged-chr10-8754315-3	4.28605228114094	0	1.3315452059262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153443871-1	2.74955057630676	0	1.33639384993574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127785655-3	5.99905845606327	-2.5833088814538	0.836866523266659	-3.08688280583863	0.00202267323624774	0.0326838786587153	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50114847077749	0.666688015277142
Merged-chr3-86758776-1	2.44366445898578	0	1.37919909811719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24703729-1	2.00230973590801	0	1.47530471486228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-43383210-1	1.92226450805814	0	1.40864864588305	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67657879-1	3.01603850953297	0	1.37244678066204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128573354-2	4.42843423174635	2.36442072723241	1.25568578197223	1.88297164878203	0.0597042102214369	0.422232826962123	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr15-93251951-6	8.5851224772266	0	1.32263654371246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-92150844-3	6.37870294394101	2.80366202675173	0.900929604564655	3.11196569914751	0.00185846091257372	0.0306751671616677	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.15961505864417
Merged-chr3-154269954-3	5.14442487909406	0	1.30606756497287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156614408-3	8.20078740617807	0.374933810386114	0.546055613742113	0.68662202338091	0.492320946444148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72590478737334	3.6659531256002
Merged-chr12-25492963-3	3.71446598848012	0	1.34393058066951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50419077-1	3.65059939166551	2.15751573084982	1.14228528720712	1.88877135599367	0.0589224725051562	0.418435590093455	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.793480537552656
Merged-chr7-103712202-2	6.13755052196574	1.71366089854637	0.735226967478244	2.33079167977755	0.019764347062402	0.185643384093678	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83205412421536	2.74866674342004
Merged-chr8-25256128-2	4.37528600301468	0	1.32101001253539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70848622-2	3.40666686431768	0	1.31844338309988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148742852-3	5.67052858768619	3.92407210595042	1.02227900514448	3.83855296470246	0.000123761520364278	0.0037545591038645	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.5268023559189
Merged-chr12-5226912-1	2.47066370019746	0	1.39053672544798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31432964-1	4.09445871590191	0	1.33101846197117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56375709-2	3.60205373875223	0	1.33405566379558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55811836-4	4.84631723559082	0	1.33066196637901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67189196-1	3.16776504031892	0	1.34890541831212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69515290-1	2.3030428307963	-3.91829767065783	1.29649546650074	-3.02222242337135	0.00250926097286741	0.0386539763161231	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26230897533156	0
Merged-chr5-67778225-4	8.50865422768742	-1.74778972466488	0.748192068962099	-2.33601744414296	0.0194903323948555	0.183703340642468	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28889507765653	1.31470332505763
Merged-chr4-102609163-3	9.10839319021946	-2.15827785838832	0.579677849431147	-3.72323672623733	0.000196684945595093	0.00540024136758696	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.86118501578287	2.24969713319017
Merged-chr1-161999599-5	12.4875999172238	1.64997214630832	0.473303424444475	3.48607692463862	0.000490160033292264	0.0108172906232747	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96288475698065	4.06769299193684
Merged-chr9-120601648-2	2.81887716531368	0	1.34377923691314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34080045-2	3.53663445552798	0	1.34268042138155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90553990-2	6.80506577913944	-1.74976188106458	0.708201485426346	-2.47071196131593	0.0134844381006284	0.138666184881819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50091046182331	1.40684701627341
Merged-chr9-123999949-2	3.7485721638196	0	1.32195791713451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66615271-1	2.71113063464659	0	1.33190220876813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78915115-3	3.47731998992994	0	1.32344381461719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5798016-3	8.40392627457952	-1.29243292677618	0.577202163942196	-2.23913389019381	0.0251472057527906	0.223748150286965	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74227275155371	2.11086637835816
Merged-chr1-53773272-2	7.71618161857881	1.06487538059273	0.719145993071479	1.48074993235329	0.138673222806174	0.784466762626882	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6358329530867	2.30219722357347
Merged-chr3-81110129-2	4.64103942420566	-0.94600318266865	0.881300389385539	-1.07341741143247	0.283083875877495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53743926588841	1.47711801254374
Merged-chr11-120853738-2	3.60894226624946	0	1.31329561781662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-56375931-2	3.48046994560016	0	1.33182326140457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157357014-2	6.83939194512855	-1.6101053767446	0.917736624449031	-1.75443077441879	0.0793567220017114	0.522009699609808	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81414526514289	2.00129118555875
Merged-chr8-34188876-3	8.09209908275638	0.712453738998969	0.81064830759747	0.878869088261564	0.37947226086795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33107791274439	1.354969417986
Merged-chr18-77949709-3	3.63470319718417	0	1.31947907879724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-81916286-2	4.30666499917076	0	1.30703008985072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81122680-5	11.7057646588899	-0.186272463754081	0.597657405772447	-0.31167097061791	0.755290591866697	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45449856693282	2.86993606912592
Merged-chr8-70598540-4	6.1683104117028	1.34966271266041	0.728885638874288	1.85167966094773	0.0640718363358059	0.444982274120477	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2909034735471	1.57074540165941
Merged-chr7-36690691-4	9.10972839946918	0.0680545562623301	0.611256392229622	0.111335533055276	0.911350279246755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01451268600913	2.51189205336242
Merged-chr13-107449898-1	3.0631743647028	0	1.38148377498868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72177561-2	8.58357216423487	0.797611114834691	0.502660158932425	1.58678005539309	0.112562467509113	0.677801972157252	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38362459638069	3.93345351219509
Merged-chr18-50229351-2	3.69921834563858	0	1.34507938614263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24991516-2	8.7151440752365	-0.515116161110659	0.509447593032971	-1.0111268914707	0.311955701106715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7241672571798	3.23813714995767
Merged-chr17-70987039-4	4.43762675416045	0	1.30930361104277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92774978-2	3.85540720261123	0	1.30795548626007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31104222-2	3.68405445381099	0	1.36579719033024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127267030-2	4.26936084666563	0	1.33286645952739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85239234-1	2.69943332945549	0	1.38143719414251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89703249-4	6.11977265340948	1.89198985230536	0.5959473898156	3.1747598607501	0.00149960549010433	0.0259515943740353	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67489992311542	3.4780911357035
Merged-chrX-68741490-1	3.69919638460722	-0.457213141767905	0.740511429614838	-0.617428878857029	0.536951878668054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47840682565489	2.76252157376252
Merged-chr7-31195493-1	2.80902909648215	3.10448368922132	1.28331347798286	2.41911562722852	0.0155582938113447	0.154041252635777	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr10-114354385-1	3.81132309184514	1.91132777809949	1.01243966966307	1.88784362700402	0.0590469463735258	0.41889933315866	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70578994193404	3.1733994807395
Merged-chr8-125533935-1	5.47815515435393	1.25535993134571	0.771880557517154	1.62636552912244	0.103871919286866	0.639338432556782	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04433700426812	1.77530737790309
Merged-chr11-99314091-1	1.07644594841469	-1.68193961213107	1.64837824646074	-1.02036023330349	0.307557646480033	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66664930160835	0.581381506691384
Merged-chr10-111992761-1	2.0329537728322	0	1.39537539204926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89282272-1	1.7504085869532	0	1.40040619009519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104683143-1	2.82371661307218	0	1.33068589792304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105927183-1	1.6359807162073	0	1.44402873747797	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171366610-1	3.5631854777748	1.98704903531025	1.14129322809534	1.74105040352018	0.0816747438386571	0.533338444177164	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.7204458171722
Merged-chr17-53468657-2	4.77427043181505	0	1.31857734026742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71079275-1	4.32826288679413	1.31990864500099	0.987129633054141	1.33711784228101	0.181184173999606	0.949071024783828	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89891777383112	3.68206090494699
Merged-chr12-34663918-4	8.11056182180939	1.91805475449291	1.17876174950616	1.62717763389971	0.103699376512809	0.638494248337515	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.683637474991079
Merged-chrX-144231624-1	1.32434478049153	0	1.48373944702363	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119843591-2	3.73675590760253	0	1.32746639541158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31755320-1	1.41172356065897	0	1.45716079156773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11602226-1	2.75140444446813	0	1.33381796814854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46006704-1	2.53038868916733	0	1.37717869474569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29944731-1	3.24752463360645	0	1.31056143670788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76456411-1	2.44905854786574	0	1.36918252454566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-73999173-1	1.74316456067638	0	1.44354631301613	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27120856-1	5.23895204930661	2.05171882362487	0.894260766912339	2.29431827889414	0.0217722233824536	0.200271355454647	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71407311817195	3.28797303502884
Merged-chr16-43363916-2	4.04121375722269	0	1.30810157797759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86272598-1	2.51057298527289	0	1.357293997401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93241369-1	6.91145428751033	-0.6630182450706	0.682407928248519	-0.971586374695727	0.331256363650065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12705727511113	2.14276642658715
Merged-chr10-87812835-1	2.63475860547329	0	1.33561195455011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99093521-4	5.1079526136826	0	1.30396231875997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98539822-1	1.13444703762904	0	1.91989633915701	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165606279-1	2.41280356853747	0	1.37969636064336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172203764-1	2.85107806970393	0.843352528448706	1.20696770641708	0.698736614049291	0.484716647685506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	1.04220233489076
Merged-chr8-86825740-1	1.70399923641281	0	1.46014609848483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121070734-1	2.28953734353479	0	1.38622973746156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43266559-1	1.40028496629233	0	1.68090588739875	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103762456-2	2.37252612086416	0	1.37625325622496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155380162-1	2.35409633184165	0	1.39323885491096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99187611-1	2.10379776129655	0	1.35003533010151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122573205-1	3.07070174926388	0	1.41836068798493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17723840-1	1.76685191364635	0	1.37683694677439	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8823343-1	2.04511172627018	0	1.47821925521188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38406916-3	5.28552128212737	0	1.35431755306723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86362898-2	2.30831213767613	0	1.3938361685088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-166708286-1	4.55668012863915	0	1.35053153656158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165919971-2	2.33886492405883	0	1.3854097502566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155715184-1	1.37365861534949	-0.0416553986712496	1.70642566339996	-0.0244109072927639	0.980524848157599	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21285190520383	1.20440436174322
Merged-chr2-27732999-1	3.1135718678276	0	1.34237256554076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135534235-1	1.54389493096422	0	1.50447042323939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87149969-6	10.9843442778661	0.623434163912222	0.654935464624248	0.95190167212872	0.34114685144953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00629133895884	3.36652910734487
Merged-chr1-46022440-1	2.05747178672064	0	1.36799037250971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74597204-1	2.06596989440393	0	1.40935101683689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34398883-2	5.55590080787166	0.708796317383087	0.687983826693814	1.03025142435294	0.302891995346545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88133209309571	4.09331135573657
Merged-chr3-9605942-4	6.32647852062435	2.4556493241198	1.21831109898623	2.01561762522165	0.0438399753042017	0.337945856579965	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr4-139296894-5	10.1347126737212	0.49204254841116	0.507110350332893	0.970286936735089	0.331903486893376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50457040478677	3.96542035547584
Merged-chr9-104039182-4	4.83022722011006	0	1.30731265791294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66081182-3	4.83289568158278	0	1.32870400611435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91507799-2	4.83982378700044	-1.60490972469395	0.737805404546611	-2.17524799195553	0.0296115375551125	0.253869789172971	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44979564688535	1.37038362634479
Merged-chr14-52083312-2	7.71100437938468	1.84017358878788	0.730900260217166	2.51768085051869	0.0118130306548949	0.125865693979254	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.91040095767016	3.00966469948822
Merged-chr11-86625602-3	4.43947850680255	0	1.32703302422877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69823691-3	5.75570882107991	0	1.29758286315857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30512596-3	6.01548839755873	-0.635555377893596	0.584291167061152	-1.08773743934945	0.27671103463776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2896626533748	2.83635135426376
Merged-chr17-88345599-3	7.8045687666131	0.277644161230217	0.627019788864936	0.44279967899071	0.657910635544889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17869943489758	2.20491078807447
Merged-chr13-105224218-2	8.71584916743728	-0.827574798627429	0.953334559521068	-0.868084336566149	0.385348165167195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6211848343884	0.733321818366247
Merged-chr17-87314836-6	11.3948667288867	0	1.28332737181376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125531840-5	12.4064962609228	0.797046289394005	0.480620980519597	1.65836765705135	0.0972432805957228	0.607500899981654	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86905137685279	3.84361775829564
Merged-chr6-99671000-2	3.32663338852952	0	1.36642212174212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84686985-2	4.43003687305575	0	1.32139063492123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101188208-2	3.68672907413304	0	1.33498069200533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57393428-2	3.29507806556048	0	1.35410520241476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134544318-4	9.1271441836417	-0.112826371472196	0.65939795445484	-0.171105128109588	0.864141103690179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68347874561268	2.08252407688104
Merged-chr17-86301339-2	7.46637409748658	-0.150665178392361	0.742098042102134	-0.203025974796502	0.839114730032971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40365337220197	2.20577486303198
Merged-chr9-86451875-5	7.30990130469416	-0.288905709683335	0.699396679724581	-0.413078468998601	0.679549123706139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85800768638599	2.18004862901573
Merged-chr7-105626863-6	11.2277533220869	-2.17676260315032	0.640036363382944	-3.40099833022757	0.000671402379320934	0.0138445755377424	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79042733358712	1.58492111464609
Merged-chr17-69223299-4	5.16105435637454	0	1.2969164900776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10438215-3	4.00284583411217	0	1.37850457741324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84141943-1	3.25646232600148	0	1.36384880025177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4329211-3	4.26252470546996	0	1.33517302373367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31713843-4	13.226673260265	-0.53599894963759	0.59360569725711	-0.902954523708742	0.366550031208776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46111183300397	2.83332077614228
Merged-chr7-83827163-1	4.48854538833576	-1.97439278608123	0.770769685914782	-2.56158593437408	0.0104195460566665	0.114529126428751	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00962771220262	1.5268023559189
Merged-chr14-52100492-8	21.1122402963591	-0.973023304806114	0.34454963410124	-2.82404393591725	0.00474218837486709	0.0625142306927709	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.16159308086718	4.15296787088445
Merged-chr1-120098486-2	7.5563742670981	-0.286294062662604	0.573555045187262	-0.499157081896352	0.617668726947564	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45359942829922	2.00318142357692
Merged-chr17-87561119-4	4.24987515324487	0	1.31968124348548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-93917375-3	5.09311522792245	0	1.32212735687373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57429097-2	3.14126129323109	0	1.33931173922862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72903616-2	9.31775463277526	-0.978608778311642	0.601672683594274	-1.6264803189429	0.103847516784272	0.639285900309474	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69521427514203	2.42844712608471
Merged-chr1-134066314-1	2.2797933786546	0	1.38241432404826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12123791-3	5.18759134088253	0	1.32032522123359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34651756-2	6.59115362880384	0.641550089379366	0.668416072697936	0.959806497156584	0.337152611770203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69136127361473	3.63231688881126
Merged-chr18-36711192-1	3.24407476963103	-0.932724620411439	1.23511873741525	-0.75517000281557	0.450146984856217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	0.420961122473315
Merged-chr15-85670612-2	7.61145238683793	0.72238733164498	0.749802634341431	0.963436641269564	0.335328445703472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15004495936151	3.02790914983068
Merged-chr14-47382791-2	7.64305143576668	0.271470166490782	0.689344712911568	0.393809020952928	0.693722043760396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38222877365155	3.66787678648267
Merged-chr4-133250833-2	5.69668326209386	1.18108388781142	0.727280662801886	1.62397262600278	0.104381650919028	0.641969257501631	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90366590314335	2.69834553060969
Merged-chr4-16044874-2	2.95295502505827	0	1.3892415441633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167961244-2	3.81015892937325	0	1.33859291846808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34002412-2	3.4088260366398	0	1.33244991054389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93705243-1	4.39524793610062	-1.24293658269243	1.04579981111172	-1.18850335359226	0.234635159368239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66920573464397	0.73596151290311
Merged-chr15-3340078-2	2.56862063239586	0	1.39018973276781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107138788-4	10.7108046577615	-0.409526663146477	0.560061311681176	-0.731217555301528	0.464646278885276	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.22623291654468	3.8419430189097
Merged-chr17-17590644-4	5.63940369153049	-1.51520562396394	0.840314050313748	-1.80314207931928	0.0713659040850505	0.482736569815501	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17313233555475	0.843323834477631
Merged-chr15-94948277-1	2.89470919261076	0	1.3317141095484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-25862971-3	4.99149735084785	0	1.31235472017814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124090658-2	4.1347757459727	0	1.30761793710893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96982579-3	3.63445065694796	0	1.33314282744843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93174565-2	3.21015313095824	0	1.3135838227958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45023026-3	7.60856332546545	0.560203502390018	0.597467010834677	0.937630851965197	0.348434150635729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49554856635781	3.98151865472676
Merged-chr6-17589863-6	11.0978874451814	1.27021675590149	0.617815580986233	2.05598044949565	0.0397844007006571	0.315274247900211	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33070561120502	2.74586965235421
Merged-chr7-102636864-2	5.50774353563619	0.001731133945993	0.785163219114055	0.00220480774423736	0.998240819366616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84884537207458	1.8131505516485
Merged-chr5-38309091-2	3.72404502564283	0	1.32883473461845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13950877-2	4.4583666043829	0	1.31314872701869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77896181-1	3.03769967824161	0	1.34892324437899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96586502-1	2.02412419342274	0	1.37030431323315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133086084-3	4.17919643087244	0	1.33439012199494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20470633-4	3.98679019176258	0	1.3232364594946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145124441-2	7.70436943075226	-0.55492855918636	0.599039556971172	-0.926363798063948	0.354256951118726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46547753594229	2.84940824855803
Merged-chr19-34199136-2	3.09791432804665	0	1.32666357487338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102616153-3	4.29881160998766	0	1.33231632669164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71337770-4	4.27095419170299	0	1.30909803155157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128203313-4	4.5927548855683	0	1.3225656186744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98019512-2	3.78242878194477	0	1.34408495809433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21550343-3	7.17096009066879	-1.81935492040092	0.730820796983287	-2.48946790774281	0.0127934468051607	0.133503764760465	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67598816720026	1.72583980988184
Merged-chr14-121598922-5	12.5896134323904	0.277797487339112	0.502502777759082	0.552827764610483	0.580381354629833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68104724570743	3.17913866312903
Merged-chr19-21942540-6	13.54761313768	0.500062462010644	0.479416094246271	1.04306565426602	0.296917886378734	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60765217529204	4.08809569403435
Merged-chr14-76193384-2	3.12466758741017	0	1.35297367748572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-24468603-3	4.32173509360968	0	1.31867559243225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75943714-5	12.8548213569486	1.13080355126972	0.553987229998378	2.04120869586295	0.0412300877401014	0.323056241962733	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42493053935324	3.36408801148444
Merged-chr2-166516481-2	4.2520158385365	0	1.34426843999272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48876722-4	4.62171599728987	0	1.31059503116818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19920026-2	23.0332366571626	-0.308978652465382	0.37132170953036	-0.832105003653495	0.405349677777042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.19100793796365	3.75834644835191
Merged-chr11-120355769-1	3.24031101872695	0	1.35419406616187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-58383111-1	2.73388773854072	0	1.40048207398445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-139065123-1	2.56528828624218	0	1.34641389563872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100419356-2	1.90384889582473	0	1.53720410120393	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30010618-1	1.84246894404283	0	1.36311467224416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25115455-1	1.57446396897516	0	1.47540549678403	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26909472-1	2.36795652028857	0	1.38413263496756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20280595-2	4.47205320122205	-3.6588783055677	1.13259795889547	-3.23051818770353	0.00123566042500341	0.0223659722670275	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00354018031646	0
Merged-chrX-168913700-1	1.82654409646392	0	1.3623780372389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88523641-2	3.41436072691689	0	1.38715645540276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116647936-1	2.31288527125997	0	1.38769857184628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34342829-2	3.34849502585277	-0.431351921597848	1.36904084960896	-0.315076005015524	0.752703946575168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0
Merged-chr4-45479075-1	1.51245914605245	0	1.584498512647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104595226-3	8.16005919430275	2.43490074702866	0.681690678040739	3.57185571911715	0.000354460683160973	0.00847205113454166	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28312079419784	4.09606202795606
Merged-chr6-112721694-1	1.45458504942205	0	1.5284197213952	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145780165-1	3.42509514561373	-0.862987263363339	1.01554880953907	-0.849774284856896	0.395450589079995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11942868200917	1.38601560292234
Merged-chr10-120064662-1	1.84397417434602	0	1.38780063258634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43445032-1	1.82685013998047	0	1.52403733980686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45362891-1	2.05705946829084	0	1.40453485756902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68191566-1	3.83115623274518	-0.358973562412423	1.08198110253195	-0.331774336513261	0.740059664183181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24353116897845	0.733321818366247
Merged-chr8-122428432-1	2.05992323574724	0	1.43349437946299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20272846-1	4.14099198489069	2.01727495994103	0.937664726906779	2.15138194074521	0.0314460654201476	0.265600962087576	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70725856063263	3.63528578347693
Merged-chr8-117332422-1	2.09423811765056	0	1.40835770654895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31950539-2	9.58295185267962	0.621067478086918	0.531098832156231	1.16940094853046	0.242242127867676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58160313557321	4.19957091424391
Merged-chr11-79460942-1	2.1555405541945	0	1.34740755959211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145823987-2	3.4968737637032	0	1.34421945632206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7569845-2	3.10200858106084	0	1.35137725352522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106769965-1	1.50773591100747	0	1.4639477860514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69908237-1	4.04032003131544	-1.89161708466473	0.903151599121526	-2.09446242082134	0.036218807285572	0.29386071279898	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53973902462633	0.683637474991079
Merged-chr15-74926056-2	6.19383962457271	0.176468682039991	0.745178412467962	0.236814001972418	0.812801088495113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26597644054494	2.72065437544902
Merged-chr12-59195371-1	1.08199911778987	0	1.67975368302558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79197600-1	3.18549135159766	-2.28050249223896	1.16171344079344	-1.96305079390438	0.0496402722745428	0.36873857361058	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44021131351804	0.420961122473315
Merged-chr4-141156469-3	3.53708463924511	0	1.32751517485524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-64873499-1	3.5972902182826	0	1.31985442812828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8728386-1	1.52411844779415	0	1.39555869277876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68945059-1	1.40989860162468	0	1.46267879830138	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71821398-2	3.31235827291552	0	1.33803720917849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21430219-1	3.67995350097487	0.131956085676258	0.921294453609285	0.143229002583597	0.88610932520822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64324385823568	2.52863192190685
Merged-chr15-42463498-2	3.79925680698513	0	1.34140439116881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76392844-3	5.96582074416593	0	1.30303124808119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103312194-1	4.24673063207948	-2.2521202576449	0.899527307694417	-2.50367080396627	0.0122912337024294	0.129775885848918	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17512331166127	1.22237730641564
Merged-chr18-84439042-1	2.31319379343717	0	1.39031742025898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3483043-3	4.41011341609612	0	1.31650465386392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58559322-1	1.83596175459725	0	1.39696583939416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21524232-1	4.74559834863098	-0.191230081263681	0.888323367822638	-0.215270799114971	0.829556194842807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66157036073427	1.29606516661881
Merged-chr7-137414962-1	2.47929428891163	0	1.4963741718092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45452973-1	2.07193064370061	0	1.45027972954473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35840280-1	1.74182750465154	0.715491901235119	1.54252298174017	0.46384521313773	0.642758647488784	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00883436684376	1.4944959016211
Merged-chr4-123305997-2	4.52687010762531	0	1.32160476815888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21566160-1	1.76594122580132	0	1.50785766386689	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133513185-5	11.8507043879526	-0.65577748878116	0.440681796290104	-1.48809752139037	0.136725177054561	0.776840572107412	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97983936022998	3.1251363054998
Merged-chr18-23812370-4	10.6777246331231	0	1.30632934053478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32499894-5	12.1710141311279	-0.497337323346978	0.483721409356202	-1.0281482558502	0.303880094252791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08492364593705	3.42322776620546
Merged-chr19-38030910-5	17.2194505296701	1.4004782278242	0.396438272358397	3.5326514251331	0.000411414537904631	0.00949975066922827	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54393360568096	4.7515726072894
Merged-chr9-94716892-4	4.78200855160953	0	1.32210275718401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25831541-3	4.68116209396387	0	1.3186112859002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134919844-3	4.3330246464897	0	1.31688046843945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46080475-1	4.19617818252808	-0.6765400777302	1.050419139817	-0.644066784472401	0.519532128056023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84104439962947	1.60572551668653
Merged-chr13-107873323-1	2.90665152346061	0	1.33231209348331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100191372-4	3.97617110201112	0	1.33131339566219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85512441-2	6.43459445140322	-0.816949030830303	0.756014496943146	-1.08059968973285	0.279875220618672	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88129159461778	1.93871841517079
Merged-chr7-100988253-2	4.40674737293309	0	1.34533939854747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58506140-2	4.0407519895307	0	1.33064378840604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88754487-1	3.5743297251265	0	1.34821459742311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91880094-2	4.43000163775905	0	1.31406861169436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46153848-4	5.5333816887544	0	1.32175525407311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148727023-5	12.1736489584426	-0.254400232516203	0.536656782103096	-0.474046431537188	0.635466797119194	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08596507533187	2.99265985842963
Merged-chr12-108338744-1	2.15125524105263	0	1.4766026841771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65272321-1	3.08716530302083	0	1.33298918782255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3428983-1	2.64753419124147	0	1.33214330910193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75370691-1	2.28486272895622	0	1.34205240056781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100434015-4	6.24744069162256	2.40862307092282	1.19712504549842	2.01200624778508	0.0442192783921592	0.339918234149305	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr7-74665100-3	4.19021511160536	0	1.31377127653098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122126354-2	2.99894272957568	0	1.33110062545351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69390607-2	3.35302948529743	0	1.37095005629038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53937357-2	4.24140890359195	0	1.36352104701316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30474787-2	3.00648019763393	0	1.39702006032773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-39953733-1	2.5424076022159	-3.33198330020814	1.21140662830763	-2.75050773402405	0.00595029869206935	0.0743265203100778	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83767015004773	0.469435083901436
Merged-chr9-22230751-2	3.42334776311828	0	1.31412869053664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76312849-1	4.78466232417347	-3.71551520380264	1.0859483094571	-3.42144756932319	0.0006228873365562	0.0130500788376407	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21591517667978	0.306240821987646
Merged-chr1-165845549-2	2.72571118608766	0	1.33520045780025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145830073-4	7.4166038190432	0	1.33135123580741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-101555869-2	2.43671067636205	0	1.43991375740356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51234637-2	3.5588573020701	0	1.37046437642045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71228414-1	3.00771986357211	0	1.31525721290008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-8683234-3	4.64890688805199	0	1.31056147508449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152140659-4	4.63261249079879	0	1.30644457377652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32146658-2	7.0558580895519	0	1.31363667685047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43404655-2	3.42168811038483	0	1.32337211915185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14815236-7	11.935197895004	0.633601632399883	0.554471484563562	1.14271274545093	0.253157876234128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3142735811291	3.93255404292541
Merged-chr6-145750711-2	3.04575891278722	0	1.35525236894897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35580039-3	11.2249413676056	0.326326538109077	0.581526781329854	0.561154788714672	0.574692020848764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82879105168804	3.19912636813704
Merged-chr8-25972782-2	8.61570591971813	0.216886000349516	0.591194234584494	0.36686081775129	0.713722839589653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53409319959954	2.49244636588382
Merged-chr10-14209583-2	3.32041344651965	0	1.32964492660179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101982213-2	3.06581602863362	0	1.35509686757333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48923822-1	2.25807734492373	0	1.43193330501809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13640457-1	5.81713064391029	0.27720438715828	0.635716734721507	0.436050165141109	0.662800333162375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06732725382147	2.37528155229931
Merged-chr3-93362092-1	2.13847515432307	0	1.3434557661458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127123633-1	5.06899227764045	0.911637588901083	1.24389141066337	0.732891618260233	0.463624535657631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.73596151290311
Merged-chr7-16228297-1	4.82017203530851	2.12594270259449	0.864531351034008	2.45906952946448	0.0139297637190107	0.141850450363483	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09428733769552	2.26085595654656
Merged-chr4-137076194-2	6.15369879245685	-2.03882215828645	0.910698932785364	-2.23874442462641	0.025172550204961	0.223825855396625	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1482857363723	1.14490468848716
Merged-chr12-73633873-2	5.45844618868167	-0.141110651208249	0.735382512587759	-0.191887417490648	0.847830393682808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52615544574467	2.38099347700105
Merged-chr9-69441126-2	3.28037799683396	0	1.34728898082457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33191869-1	3.2980976899177	0	1.32167659584346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70682365-2	7.11022390711348	-0.600824763695687	0.766390535892668	-0.783966836171672	0.433059570157908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69561661428462	2.14836790296005
Merged-chr11-53788502-2	2.67438952913828	0	1.34605856920784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72580403-2	3.11651442216883	0	1.3421737378652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33497151-3	4.05543926471664	0	1.32487265790919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6570634-3	4.71301890516514	0	1.31879348066452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79399611-1	3.33864091323465	1.23119534923531	1.01986638903069	1.20721239809213	0.227350356975525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	1.34805514843284
Merged-chr3-34033979-3	4.1733715308201	0	1.32021153726397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133475572-1	7.16275309258769	-0.926553494256241	0.627219506327115	-1.47723960257865	0.139611421506735	0.787806807024196	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59387418779975	2.17343914874612
Merged-chr1-183657267-2	11.8298340307401	0.760864450970497	0.496491940600633	1.53248097048673	0.125403789959875	0.732383238780768	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81617492703959	3.0390451837193
Merged-chr11-72466471-3	4.47263091748517	0	1.32272336233541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19875014-5	13.392531303672	-1.06847989104698	0.406204592403268	-2.63039835351301	0.00852848692244349	0.0979614179001569	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.98615495063785	3.85603478869005
Merged-chr16-12089849-2	3.33622326357632	0	1.33063964844781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35903520-1	5.30398362940851	0	1.29933978055487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89015095-1	4.32227853636228	-0.368097268014551	0.820707612033859	-0.448512067656277	0.65378367890011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17016120194226	2.6585960826409
Merged-chr6-3475144-1	1.7564833324493	-0.437247089887281	1.36338336168547	-0.320707368283224	0.748432162938092	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr8-117471412-4	4.906249606386	0	1.30807127533481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107321738-2	4.01366971091111	0	1.34224899848533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129472114-1	2.16685164762192	0	1.40792615782642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29902494-1	2.40879655567467	0	1.45843657134534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103702772-1	1.99054054477534	0	1.41119857745769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112387496-3	4.06562797773736	-2.03018422871589	1.13724745151017	-1.78517368934965	0.074233148236155	0.497355922640979	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72833056711884	0.382164212378408
Merged-chr19-21510323-3	6.52118107092293	-0.943959785675063	0.643222129241234	-1.46754867838361	0.142226857372361	0.798175560104284	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13788828108979	2.05066483796074
Merged-chr17-79584663-1	2.24054246287707	0	1.35663763232977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40963062-1	0.992187869528834	0	1.55054197974376	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157808060-1	1.27437090334519	0	1.79360819706631	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97463010-1	4.46469882488359	0.572570122657544	1.00745030885208	0.568335845079988	0.569806943858874	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72296548970819	2.53350380922037
Merged-chr18-75501793-1	4.44476632429273	0.0427078945298327	0.993818101466132	0.0429735526720914	0.965722616281917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38805374936605	0.793480537552656
Merged-chr4-75259536-1	2.19085268617982	0	1.44234010479154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10920420-1	2.11720785204069	0	1.37978669350665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12814025-1	1.88053835461997	3.44480667834709	1.38748889094002	2.48276343028105	0.0130367634476646	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.40264952818025
Merged-chr11-46833520-3	7.39130861530379	-0.973500846934882	0.699608456551781	-1.39149382460735	0.164075730975336	0.882655974371974	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16784612455143	1.45063110846411
Merged-chr16-31355106-1	2.64818293329122	0	1.3545031879304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79123582-1	2.90062051296431	-1.17396470971818	1.21199157046022	-0.968624484139269	0.332732582695145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39579223258405	1.28311275482176
Merged-chr1-82879434-1	1.70156460744195	0	1.48279079604431	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-77983617-2	4.16568692060745	3.13861887343989	1.11995002705592	2.80246332212748	0.00507139826307145	0.0658969160665474	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	2.73293320956166
Merged-chr8-8013555-1	1.89623346021552	3.33179820848939	1.2756908098134	2.61175998357843	0.00900774691940357	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr6-49973706-1	1.93001543841323	0	1.37161229588887	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84313720-1	2.33466590925482	0	1.39184291610188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129669298-1	3.42669105291036	-4.84009288871704	1.30298191869173	-3.71462782352098	0.000203502983831014	0.00553626393897646	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44573855414372	0
Merged-chr3-146154946-2	5.06480028796989	-0.710632802343213	0.842562922768725	-0.843418079694297	0.398994663917848	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59951703852539	1.86737052669785
Merged-chr10-96298758-1	1.83149444962306	0	1.45285700996812	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120821082-1	1.37943566324012	0	1.50617440731249	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37026613-1	3.20184651221318	2.01384574033125	1.15149178195187	1.74890153094938	0.0803080419193031	0.526412810438236	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.817773273751962	2.44636763492635
Merged-chr3-101552803-1	2.53581711675323	0	1.40897579177025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15988361-1	2.85401014301926	2.50001586020764	1.62265049131399	1.54069892043306	0.123390079688005	0.723467756598685	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.963545719069792
Merged-chr10-68147054-1	3.8817306110562	-0.147338053964663	0.783195092291547	-0.18812433251282	0.850779187042846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32946581390367	1.99834080004871
Merged-chr10-127617501-1	1.93691341314748	0	1.42635068576292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124640179-1	2.29474473217051	0	1.35714954635959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32195458-1	6.36400815437063	0.836413414136882	0.769741842087443	1.08661549678608	0.277206773457043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38600283409653	2.10134524129244
Merged-chr4-140539477-1	4.37096011576552	0.529545445215003	1.01510238808722	0.521667027316165	0.601902186005698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04434902953287	1.96073424694151
Merged-chr10-84146328-1	1.59050179325335	0	1.42090935338863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61029381-1	2.49005152499892	-1.86674092911343	1.219140444302	-1.53119432452445	0.125721373065235	0.733647869648228	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4234758114579	0.82780788634396
Merged-chr14-59397147-2	2.84847075055406	0	1.38587954110523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42436971-1	1.27652657198926	0	1.62915767781293	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83645352-2	3.34025200194921	0	1.3418279778587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120749611-4	4.71216906195678	0	1.30339516736139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75588762-3	4.41246294894719	0	1.3120605344908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157285550-4	4.66223183512333	0	1.32250780510674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34193544-2	5.68111286416247	1.99105851642652	0.949781691639244	2.09633280358365	0.0360526787267073	0.293241018680037	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.86728154592049
Merged-chr1-16505120-3	5.24694455578704	0	1.31894367151469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38335584-3	4.36518668879376	0	1.30541034579282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16079244-2	3.66276265950335	0	1.31926476893007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50436632-1	3.06561083763383	-2.30798208469113	0.969946359658306	-2.37949455834257	0.0173363989839251	0.167633076058533	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51056972181958	1.19380919831911
Merged-chr14-25607462-1	2.91638563819865	0	1.36899403227209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70005294-4	4.30511816841545	0	1.31650767830827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113308920-1	2.45208155316438	0	1.35040739677064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50865554-2	6.50421213227556	-0.830238487082085	0.620984584256392	-1.33697117147645	0.181232047172951	0.949245700109302	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91911136373784	2.6224243831678
Merged-chr13-49321644-3	3.83084459892012	0	1.32549876561418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4521119-3	3.97222221485438	0	1.32312977742123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59064134-2	3.35280185627085	0	1.34707136244376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145301287-2	12.2107168664738	1.48984924685951	0.538221145713897	2.76809868717323	0.00563843792228641	0.0713505476667077	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2896120833762	4.64948622626823
Merged-chr8-56896148-1	3.02612722613036	-0.0320081976110531	1.06181230984439	-0.0301448733587804	0.975951513211812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03510717223312	0.918668513615376
Merged-chr1-172468667-1	4.28992791781546	0.154174593135033	0.837107762418123	0.184175323723763	0.853875917144217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79020264746422	3.39508237167053
Merged-chr16-3239511-1	2.65951976506586	0	1.32135061678005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18927527-5	10.1969661870408	0.841628966349951	0.481952439778325	1.74629049857505	0.0807604860481103	0.528742082085945	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77796803585727	4.0225639444915
Merged-chr16-21392913-3	5.06172178574355	0	1.30046266368125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126928871-1	3.8342604023484	0	1.33719040037946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152592632-1	2.37102196567969	0	1.36749049874741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150213422-3	5.15394785116364	-0.845521991204849	0.718150026178251	-1.17736122033502	0.239051361262029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07088234663332	2.1552264446993
Merged-chr3-31089199-2	3.13000816371106	0	1.40393609893214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43352753-2	4.50278267501752	0	1.30058770093617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167980565-2	3.83260862334184	0	1.36088064953622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37120429-2	3.03650243635039	0	1.35204082946852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100697622-2	4.09706033181792	0	1.34444076622138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69545227-5	12.0395302626754	0.0448213551189102	0.431350792061689	0.103909291332657	0.917241333608143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02680318577267	4.0224084544899
Merged-chr16-65453978-5	10.1064253379912	-1.31562781427556	0.657857810318094	-1.99986652684022	0.0455146785099946	0.346280379778101	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14154220845666	1.37038362634479
Merged-chr5-5243794-2	3.98340500459449	0	1.32272470559494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95425086-2	2.79259495503126	0	1.33398726727053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119836117-1	2.72141760205113	0	1.51779225268804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54129840-2	4.71617176096546	-1.36406696807118	0.747442783639489	-1.82497844374012	0.0680042823540428	0.465417661783335	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95221864893308	1.31470332505763
Merged-chr3-108878559-4	9.6860048011489	-2.02517524285914	0.712700413456152	-2.84155194051075	0.00448945382036283	0.0599076678263078	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53288634377136	1.47190689055611
Merged-chr10-42637396-2	3.2007870535236	0	1.33431483297808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143471755-2	2.6910318350814	0	1.35455974666395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73408455-1	2.82878741839568	0	1.37553202168148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55475163-1	4.4094777621572	-0.105803743185959	0.84822677768157	-0.124735207576385	0.900733183447602	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26713755847526	2.52193773039031
Merged-chr7-97076748-1	4.07433487603168	0	1.33260346625221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60707245-1	1.8398675189836	0	1.38955471937294	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87190547-1	5.0126199150907	0.439298067572979	1.03073104582214	0.426200481060103	0.669961766988197	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91707472901975	1.99834080004871
Merged-chr12-12267236-2	2.28271623659532	0	1.48501677857695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107963870-2	3.6153236646913	0	1.35651914371744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113663088-2	4.38813728373485	0	1.33714273915143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22649779-1	2.1828642680043	0	1.34475169388724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43903027-1	2.22061905257637	0	1.36076747015141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129301476-3	7.59385437270337	0	1.34588805429431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184023291-3	6.91350919355835	2.85886889303344	1.07469931082971	2.66015699854341	0.00781042350154653	0.0912207210244968	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.60572551668653
Merged-chr9-55244265-3	5.1670874118386	0	1.30398944862767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75639625-2	3.9809220521684	0	1.32518536104559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10005422-4	5.72916259605688	0	1.30886393831473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129630727-2	4.29558398131928	1.72534639747935	0.982662946841451	1.75578656244757	0.079124859687326	0.521061481520508	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.80132158588404	1.22548804685604
Merged-chr16-50000977-2	3.76628161077244	0	1.33669916890429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23975313-2	3.37752584127844	0	1.3644077500461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63827631-3	8.6095894938727	-1.13028373412521	0.631999024161234	-1.78842639136236	0.0737072415783819	0.494910954395904	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7095768025683	2.00266078024517
Merged-chr2-70838697-3	4.23707014804896	0	1.31660882424658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92411607-1	3.49128236492623	1.53308360208175	0.942087228435231	1.62732659546626	0.10366775232526	0.638480013519929	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.814777624442019	2.00098049458557
Merged-chr17-22410952-4	4.41164819578689	0	1.32541365464534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114079995-1	3.19237562674865	0	1.42213400907787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59212491-2	3.78610121744531	1.77212061491147	0.79816521453717	2.22024285528286	0.0264022866705448	0.232080148610898	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10450937279159	2.26028312783496
Merged-chr11-102456235-5	14.4801836780831	-0.283141567422444	0.440804425636181	-0.642329230278954	0.520659439138148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85876802923751	3.54134420641385
Merged-chr14-57372574-3	3.97178936922907	0	1.32265703008945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97939040-2	3.26879730225003	0	1.35222133728271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135467426-3	4.99383372081326	0	1.30511485406368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38494885-2	3.12460751624118	0	1.31344932812154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32646179-2	3.31861555697212	0	1.3342592968287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6142724-2	8.74555078213219	2.18772217041373	0.861965510746894	2.53806230427719	0.0111468138039939	0.12039664377451	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860429154817231	2.22392366263603
Merged-chr13-30834538-2	6.12090790840882	-0.402969045055217	0.836237613703023	-0.481883424581671	0.629888761598394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85402297106514	1.20997209872237
Merged-chr10-80596268-2	3.88185376986975	0	1.30376865164677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123525353-3	3.41118753088887	0	1.3220144200194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42391429-3	4.56970061182552	0	1.32934125656201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12416458-3	8.73953049748993	-0.452786918738952	0.507265035971899	-0.892604233744262	0.372069151114478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14348338652977	3.33873882906569
Merged-chr13-23772753-5	12.944848661838	0.562985465110496	0.437767995104401	1.2860361456443	0.198430447218066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65587309120356	4.33340331129168
Merged-chrX-99066762-3	7.32309175748902	-0.831375539655396	0.546834021311016	-1.52034348130389	0.128424671264329	0.743672033851859	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6898601183361	2.86347454477436
Merged-chr10-75289622-1	2.89188471245016	0	1.36631043350806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138089724-1	4.66746242345856	0.0277760947670957	1.01638894922416	0.0273282140545685	0.978197953707018	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16944489465408	1.19380919831911
Merged-chr1-36088004-1	2.15072299119324	0	1.42530357088111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23794148-1	2.32802086424853	0	1.33981402583027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30679093-1	1.85891255172893	0	1.48518638704794	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46550164-1	1.55236167694756	0	1.454388148759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-39182933-2	3.21932115587508	0	1.38333824752479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68136214-1	5.02249573750492	-0.661501888291345	0.774311891996401	-0.854309348892732	0.392933608532925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98989884192425	1.23021119707292
Merged-chr5-115174742-1	2.07701513900953	-3.95622227488848	1.33305820761623	-2.9677790904292	0.00299959827846458	0.0443524253711322	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38246421887267	0
Merged-chr4-48075687-1	2.42432539451999	0	1.42381885231076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135066948-1	2.07668381508162	0	1.39092574216432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113062449-1	2.84305321761048	0	1.34579394859383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123489258-1	2.30004862321844	0	1.50002483101426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123016175-1	3.31223087297986	0	1.37244991753161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53948765-1	2.02345298005165	0	1.38240791259371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37342454-1	1.59606633034472	0	1.4330586856539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20215467-1	4.91673552474746	2.41611163447695	0.880745433219839	2.74325763534657	0.00608329363433556	0.0756170640725303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	2.31480678761111
Merged-chrX-140492472-1	2.22268754426104	0	1.47022026116637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181529269-1	2.08124998049304	0	1.36761276350208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99994188-1	2.89940603486894	0	1.32563959938733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22090100-1	2.48280846252832	0	1.35462648531806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-13271991-1	1.16923914258516	0	1.49654210498493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128804327-1	1.97728158082527	0	1.48446487243529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33246597-1	3.19862070365617	0	1.38470497844757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55850073-1	1.6625735093675	0	1.45543076992422	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72383490-2	3.27702441623159	0	1.34530256252017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133083955-1	2.38846039457243	0	1.37839026250444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87137185-1	3.49811222176991	0.555341215484275	1.29405779484754	0.429147150687889	0.667816140672916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.363775732101	1.04181016172925
Merged-chr4-138930683-1	1.5597955606579	-1.1252696554987	1.4311473457127	-0.786271000585428	0.431708738014702	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76561596842564	0.735627456805112
Merged-chr4-82619755-1	2.9752503993885	0	1.33207983660409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22297164-1	2.56027375793475	0	1.44539592274088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99338052-1	8.49514679725658	-0.345347391061011	0.662859036639285	-0.520996730785979	0.602369048778692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27760697988235	2.08364730863447
Merged-chr13-49267845-1	2.63369560543483	0	1.37399079255444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97335641-1	3.4046434559402	-1.32660235477064	1.03880609804072	-1.27704521303131	0.201586285425275	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9190029542577	0.733321818366247
Merged-chr6-115803706-2	3.45421347199284	0	1.3278177653156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65547055-1	4.240606882883	1.65972747227494	1.09076613346599	1.52161624875631	0.128105263748639	0.742387953611082	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12000521415173	2.6206607351343
Merged-chr5-143626424-1	2.12002997009617	0	1.36338445842612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43689299-1	3.79931437257827	0	1.31640452921134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7077373-4	3.74898344056102	0	1.3258257224916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56075442-4	5.30113389741063	0	1.30400085473095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103592972-1	2.05521891965995	0	1.37090512220245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48149434-2	2.30778230145228	0	1.40086784502733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80195532-4	8.20712711913175	-0.545129093655596	0.883807625709814	-0.616796096568849	0.537369226979435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70831110523036	1.29835464915396
Merged-chr10-13048850-1	1.54007591300334	1.26705743353388	1.43985471153464	0.87998978187418	0.378864845022599	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr16-78306568-1	1.66947816412695	0	1.48016796186097	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19930361-1	2.25028232904163	3.83604003957702	1.18586081360442	3.23481474011893	0.00121721681629511	0.0220883782498252	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.21225560339436
Merged-chr15-9955163-1	1.45175611267913	0	1.49985784666184	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25226655-3	4.48915078408741	0	1.34068651081098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159334428-4	9.06886177248405	-0.510994043929214	0.552217549952661	-0.925349156275492	0.354784316928788	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49394654624571	3.03824771725394
Merged-chr6-134082590-3	7.60961590771979	-1.38037844240322	0.705985371338875	-1.95525077210223	0.0505534785211009	0.373779996315893	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34948750607191	1.93871841517079
Merged-chr18-26740450-3	4.93248777873367	0	1.30083515424871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-55098499-2	4.29313282880346	0	1.3078631482429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21818685-1	8.1010513917989	-1.14313609298361	0.574717494022039	-1.98904001509266	0.0466967863891404	0.352850162278535	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00014591645292	2.47759419528723
Merged-chr16-45630536-3	6.03692522492188	1.48775684211534	0.888734954712698	1.67401634674794	0.094127386735311	0.592738577007385	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.700451271595348	1.78807244155879
Merged-chr13-59856519-5	14.8312767699248	-0.148746194449128	0.50132099201212	-0.296708489808326	0.766689074847699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18038875482717	4.06561517578777
Merged-chr5-101840596-2	3.1971888061435	0	1.35250242258387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-190944469-2	3.23587254586172	0	1.3373301969459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37867065-2	3.09282377882331	0	1.35456544762649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43847993-3	5.00628444895496	0	1.31608526476101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135773321-3	3.78780064077618	0	1.32921443151579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53461548-1	3.70584434790899	0	1.31566943564153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112999059-3	4.60053315850919	0	1.31129584389416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160062697-2	4.67998180677184	2.44218992279162	1.22276514464409	1.99726818636335	0.0457960573629157	0.347611704546067	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.11145969726662
Merged-chr1-134075778-2	4.25404050295371	0	1.4174772318299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141568533-2	2.92697656426853	0	1.37384117391729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11823241-4	8.34495531543822	-0.607720139595667	0.753518303978859	-0.806510122430573	0.419948773820255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13630952604471	2.15961505864417
Merged-chr9-124013462-4	4.51205185976849	0	1.32039943975086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154076198-1	2.47208306356359	0	1.38457422015798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157381471-2	4.70451747681919	-5.29091531532082	1.15904507798751	-4.56489175080889	4.99752145604907e-06	0.000288742738343928	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96929027135158	0
Merged-chr19-24992356-3	10.2842120146634	2.03016105911171	0.511536762384285	3.96874908784479	7.22509085448121e-05	0.00245450647768679	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28606174251929	5.08947189191756
Merged-chr15-74970542-7	11.8584386568481	1.31643801290823	0.443738889965147	2.9666951504107	0.0030101926069778	0.0444830497728565	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15824481028259	4.196382758693
Merged-chr14-121919934-4	12.9842229052856	-0.430609912017004	0.408486510311656	-1.05415944259327	0.291809925081833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.45499713825556	3.73263375540945
Merged-chr6-52401635-3	5.45975224230603	0	1.32321716459472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5860088-1	1.75520316843967	0	1.37762927218841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122922966-2	3.22599666208033	0	1.34655234325201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8992857-1	3.30150147780828	0	1.33748314224814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120198117-2	3.44744746929888	0	1.34286596391087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56369320-2	4.957608281554	0	1.30872321897857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52129949-2	2.89712936183724	0	1.40287650285154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94435143-1	1.28143103355402	0	1.49713987236669	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80776049-2	3.17236594137097	0	1.32396408213639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137072795-2	3.83290103646475	3.45408389565728	1.06538430224355	3.24210136040437	0.00118651814195136	0.0216636531165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.3022060396979
Merged-chr7-139949983-3	4.60310906236725	0.957180886436709	1.14421514210842	0.836539258406365	0.40285160073388	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	0.733321818366247
Merged-chr11-94129835-2	3.92633312522595	0	1.31221164842128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3833847-1	4.13186044700114	0	1.30017873783906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78792633-2	3.42843730129024	0	1.3260168363677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-31972203-3	4.40075012528721	0	1.31312788920877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108736355-5	8.68564418534429	-0.528880542347491	0.574198369334883	-0.921076357218003	0.357010562947687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91142062471809	2.32131143445014
Merged-chr9-104270140-3	5.08655970586657	0	1.35161912242244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26705675-4	8.97737726556214	-0.556246307230704	0.538711765516525	-1.03254902312625	0.30181499468051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65163697920919	2.71401670368601
Merged-chr18-76034712-2	5.2791141754579	0.753988025501907	0.902793137431541	0.835172526507028	0.403620575981726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90291182009043	1.35032549026822
Merged-chr2-36276736-3	4.610578276323	0	1.3111083577383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9989565-10	30.7421793930841	0.685155398112642	0.372264388935656	1.84050749541629	0.0656937648559954	0.453471942947867	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42866437171585	5.12199365541361
Merged-chr16-4960606-3	4.57047408487696	0	1.30891758494853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134367959-2	4.88203544612083	-0.388743154211325	0.753201425331192	-0.51612110802949	0.605769826299186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53401215780056	2.24553328998514
Merged-chr18-50099206-2	5.30002424715283	-0.240251809819848	0.919453646825125	-0.261298446799833	0.793862364250431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5176002356128	0.989878296978726
Merged-chr3-19629266-1	4.47315697492351	0	1.30963070638542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24608144-1	1.88246765399846	0	1.4651889224989	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97469041-3	10.5562900756515	1.03974184061584	0.488392958744024	2.12890423991716	0.0332621839257773	0.276940514269531	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15617772365638	4.28961364609949
Merged-chr2-38944173-3	4.50411693555488	0	1.36111128835292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22744500-4	7.42566577776518	0	1.29427177759893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122070233-4	9.88192647198444	1.12654612641097	0.573925948556919	1.96287714337287	0.0496604512192559	0.368846538460275	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38328073902884	3.54022323804313
Merged-chr18-83938369-3	4.75433719236069	0	1.32561715548075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-177191804-2	2.95379817476414	0	1.34511762164396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64052205-4	6.50413068744789	0	1.3206005307847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136670642-2	4.15485646267135	0	1.32135166680804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47121251-3	6.63112711356527	-0.837913443628113	0.808218106291988	-1.03674173729213	0.299856234985826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40114435556684	1.34574950999398
Merged-chr12-34672895-2	3.40599561827288	0	1.34658135921577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147825802-2	3.14478455100333	0	1.35455964412714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106908468-4	13.7874192574637	-0.743048867178202	0.437575277346018	-1.69810523045301	0.089487902581357	0.569837895349966	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98480220096333	3.19090291045955
Merged-chr8-86870927-2	3.28807804362349	0	1.32667076555234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94373023-1	2.22107422131236	0	1.37064855478439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8061969-2	5.34563543883204	0.0724955481193467	0.662086962379804	0.109495507748361	0.912809484644898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77912173564219	2.48211543439749
Merged-chr13-73508968-1	1.33864947260397	0	1.47828583134049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152266558-1	1.82810462781415	0	1.40447684320792	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125459329-2	2.858313327826	0	1.36314696301013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76244774-1	1.68177527492507	0	1.61233800843829	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35209557-4	3.88755453785956	0	1.32976472395397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44980545-2	6.89621459295966	0	1.3278033685033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72367403-1	1.46454751081218	0	1.47743784017923	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29240075-1	2.71738115072401	0	1.37488218362602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96474854-2	3.65185824728547	0	1.32320779363592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146752960-1	1.64736218729976	0	1.57799322432525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24606250-1	1.74461853192502	0	1.51223375683312	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74077527-1	1.8351261826434	0	1.41531302940109	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67610464-2	4.95643078878503	-1.2760253528802	0.794341673168544	-1.60639356586979	0.108187463687063	0.658142189899705	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46781895707765	1.57403368136583
Merged-chr11-74532551-1	2.16069707454283	0	1.42887779641517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6002039-1	1.34081263809869	0	1.59399607169259	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25578369-1	1.78881420744524	0	1.53214019308485	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50866662-1	6.88077630253447	3.51135562409992	0.759671470335921	4.622202835322	3.79686488544064e-06	0.000232913859137154	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.543422078079461	3.84579281518448
Merged-chr8-126687303-2	3.7723424363143	-2.21500385092118	0.980619242370792	-2.25878073284191	0.0238970276050883	0.215211571924214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2272739759319	1.03295826569721
Merged-chr6-38939945-3	3.87316891783804	0	1.33398450233473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-10589871-2	3.2435278494354	0	1.32037900500589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8437324-4	10.3007007574543	0.549954100438612	0.562947905280387	0.976918281922903	0.328609610161111	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24948830804085	3.85168047873376
Merged-chr14-100026205-1	2.18917428430125	0	1.39073400635042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105947411-1	5.21627403212779	0.694649096355517	0.709601652048851	0.978928240020071	0.327615437553105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63199423481983	3.50097278683654
Merged-chr10-8011240-1	2.62481665163022	0	1.39392628874963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8883262-1	1.79906196981622	0	1.43126784972122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105965820-1	4.88452201577982	0.0895926122437718	0.763030588505019	0.11741680293487	0.906529769357374	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42613251896906	2.388633508238
Merged-chr11-32560892-1	8.13378220422843	2.95774992052228	0.662927821042782	4.46164699479613	8.13321266289626e-06	0.000429299607972229	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32064508794532	4.30103022501261
Merged-chr1-149948575-1	2.57566985592584	0	1.35699675193127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99192798-1	1.29777376040836	0	1.49266025275533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74841049-1	2.20804739258723	0	1.42314716673386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81406057-1	3.4691207578886	0	1.32043789575203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11434451-1	1.33216861941175	0	1.44330060092508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122466254-1	2.09937882831073	0	1.37945466214116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73505863-1	2.74162095027903	0	1.37105872852711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99374538-1	2.18115883539999	0	1.38698641455233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156261765-1	1.58033823630788	-1.06529773157547	1.3920622355345	-0.765265879916956	0.444113237146668	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92257230176248	1.31470332505763
Merged-chr1-106822138-1	2.52228325716603	0	1.4041444273084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62491027-1	2.88932947235844	0	1.32761868595799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-72240224-1	1.55881014264193	0	1.45333907381034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14439301-1	2.12898782324702	0	1.40104437190662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114887830-1	2.21154615503131	0	1.36956375921272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113470359-2	3.54286167990808	0	1.34553310815561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64957135-1	5.43956500575361	0.8810211583446	0.799720089605256	1.10166190620455	0.27060868391537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58270194477873	2.95419319797526
Merged-chr13-52651565-1	2.11552894859071	0	1.46116643523905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91455563-1	2.3788479040159	0	1.45131657994128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23446828-4	4.9769630563636	0	1.30169976803404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88285064-4	6.05007516636308	0	1.3083185514199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174477351-5	7.7692919596031	-1.5528287593647	0.631521146409716	-2.45887056703128	0.01393748559884	0.14190697007507	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6444882928314	1.85111348754977
Merged-chr11-77404187-3	4.36037002725024	0	1.31130843465319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99238895-4	4.51421783487128	0	1.32793326760183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21962827-2	5.29839162785506	0.73883870455797	0.613070131849051	1.20514549017352	0.228147141206837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52348822098696	3.35772346007919
Merged-chr18-39138048-4	5.76097844266902	0	1.31145543792963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107607534-2	2.79290358297962	0.747141365141701	1.39186024474512	0.536793379911873	0.5914103450055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.382164212378408
Merged-chr18-82843762-2	3.45341186593405	0	1.34976474571048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57688149-3	4.00179364957334	0	1.33521415512116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92067357-3	5.15456001820138	0	1.29772069907523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131431618-5	7.35216682508115	-0.961243055937891	0.731535088587138	-1.31400813294466	0.188843467322547	0.977671146859387	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71101430311795	1.26309897836414
Merged-chr19-5151499-3	8.20656575189137	0.960807999666302	0.687021071856885	1.39851314468336	0.161959028193232	0.875165356513266	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75324624593098	2.16975473850456
Merged-chr10-19171227-3	4.53415336942933	0	1.3179548784629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89335499-2	4.77755129815158	0	1.30663795148107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122454624-2	3.31962002584436	0	1.31225394453657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109028460-2	2.63034518344414	0	1.39331667036362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46628877-4	5.01665861077129	0	1.31648329691047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125617910-3	8.16861924815966	0.978432283676676	0.53474972006403	1.82970134806152	0.0672946092227978	0.461769771529239	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72586445272629	3.66971831928825
Merged-chr2-90486600-4	7.41790458321656	5.03223151564605	0.994886202682256	5.05809760159397	4.23459698206753e-07	4.08735560399091e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.95066592442779
Merged-chr17-48192751-4	8.856439880528	0	1.3031725963922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116456009-3	7.28273574866594	0	1.30371934504895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49236502-1	2.6374173030223	0	1.35834506001746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78770794-2	5.63350957967498	-3.41925945803033	0.913647089955145	-3.7424291015891	0.000182249961298394	0.0050764305076747	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.03249812182703	0.73596151290311
Merged-chr13-6471828-4	4.28835538804969	0	1.32590888044106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39524742-3	8.07890858938598	-1.55591871319757	0.631998599895983	-2.46190215208333	0.0138202364738418	0.141130984938219	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20265091256739	2.68623598131437
Merged-chr1-74437572-2	3.29662508315501	0	1.37247405345507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101214292-3	5.06502105335618	0	1.30673352949807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13467216-2	10.5573649252641	0.045612871147198	0.497777005172991	0.0916331422970138	0.926989518470766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99662083411624	3.85290465971105
Merged-chr11-88234171-2	3.58838918160014	0	1.31210191051053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5494478-2	3.52825892608305	0	1.33914613523175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57868828-1	2.68809542865744	3.06920382928616	1.18642409234615	2.58693653398155	0.00968334259789472	0.108350634486649	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.76628008406346
Merged-chr17-67317108-2	3.44858953320876	-2.09680092762614	0.9923804101071	-2.11290036186813	0.034609296900143	0.284798834703344	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49509249295041	0.851599296279844
Merged-chr3-61306714-2	2.77278359883741	0	1.34718817694066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98002821-2	3.28906999190388	0	1.367356802945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118637602-1	2.69548267004599	0	1.39205106478237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90708892-2	2.13035229584593	0	1.52486509406886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106458200-1	2.79378505897853	-0.968817057004309	0.870096872369405	-1.11345884322751	0.265511414979878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7668249429818	1.84016081186083
Merged-chr10-21383114-1	1.93865115913247	0	1.49184572050188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11084899-2	3.92489142151494	0	1.33439912593908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82902832-2	3.62168169583847	0	1.3096213009528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45458242-1	2.1606563129222	0	1.37422308354114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33909196-1	2.10943139876347	0	1.41670052590993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36598524-2	2.04476460154311	0	1.4342465700205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8431190-2	4.77501493604588	-0.60475611011767	0.810307599955426	-0.746329060903461	0.455468660468663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48244257391627	1.96491903277391
Merged-chr12-42187319-1	1.98133855193823	0	1.50386049374952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97523720-2	4.30670214158009	-1.51848321257416	0.737198429616399	-2.05980256003028	0.0394174197508847	0.313163612284658	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52970445684054	1.30806904914164
Merged-chr2-93943227-1	2.54271426169021	0	1.45620670077767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6513146-4	5.38264676925209	0	1.31631946462599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123361474-3	4.49851765594848	0	1.31872251305466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87543471-3	4.01670046176916	0	1.32445662051549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117378830-4	12.4825588143092	1.40479396458305	0.571409076365268	2.45847331218282	0.013952914660281	0.141975577918206	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60133199913867	4.41371418376334
Merged-chr14-64809929-2	3.20514585070262	0	1.3665716798445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91380662-2	4.01152661748795	0	1.30321872712794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102816470-5	14.684264852711	0.273341842479932	0.448365536353301	0.609640617570895	0.542099899130185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08691696008257	3.44236899879702
Merged-chr14-25749379-2	3.41674533534448	0	1.35038778885995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8767682-3	5.84287377207324	0	1.30038103409088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90857088-4	10.5769530847072	-0.197307306999851	0.593492983387604	-0.332450951439457	0.739548770484277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42552682399088	2.16523349939429
Merged-chr8-68203663-5	7.86525385493264	-4.16510436044918	1.05685429418987	-3.94103934983956	8.11293145836828e-05	0.00268973931546694	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66795610373312	0
Merged-chr11-70897868-2	4.65453795924319	0	1.29939891877406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132631022-2	3.36835711714324	0	1.36443963729868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58306626-3	3.41992702689947	0	1.31882151545681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145243255-3	5.00865378047861	2.44468963524526	1.19591922120701	2.04419294538798	0.0409344898408991	0.321503025618196	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.735627456805112
Merged-chr12-4159391-1	3.50875049953314	0	1.40099435975005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11110398-2	3.20576466587693	0	1.3616634912603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90527176-2	3.73938861064847	0	1.33591824208386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52223105-2	3.87980436725199	0	1.3387547524087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59692648-3	4.76329378599646	0	1.30346153967378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112930300-3	3.89172018521774	0	1.31724081339534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80867236-3	4.28460756262486	0	1.31182069403224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5600444-2	6.27348445282152	-2.14862977096126	0.747171884345209	-2.8756833815344	0.00403153885086418	0.0553223304805903	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42718033125978	1.34591112769102
Merged-chr8-26681338-5	8.29276936315228	-1.38426685842933	0.664654974728991	-2.08268486818105	0.0372799576253427	0.300122719106276	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89163321874161	1.87496859647037
Merged-chr6-26297566-2	3.46144219092235	0	1.33781232498713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87212510-2	3.14521398024131	0	1.33917224066354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125430985-2	4.25699073560182	0	1.31784948724798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113899312-4	6.24663366846724	0	1.30046644434495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113819600-1	5.12082655593004	0.708812691063859	0.882654042715103	0.803047011356231	0.421947562905725	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69666452028646	2.34988471442079
Merged-chr14-122876373-4	4.30249989216658	0	1.32420880804841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166655891-2	2.99333065150145	0	1.39185563340343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51235066-1	3.25883986514198	-3.84138996924392	1.10054185418396	-3.49045332046209	0.000482201843424479	0.0106994776436048	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71800778006011	0
Merged-chr17-86788505-1	1.90806326698553	0	1.4266393328068	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32135219-3	8.58049885984472	2.23012026555638	0.708678138354271	3.14687323463269	0.00165026491440536	0.0279373603877545	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15349869815446	3.2618610394913
Merged-chr9-90239315-1	2.12690263925631	0	1.43000716573575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67384477-2	2.05882453568919	0	1.4197634708089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-158948174-1	3.45789466913665	-1.34514273479785	1.0891527377911	-1.2350359027935	0.216817142484001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55381103454351	1.34574950999398
Merged-chr2-18687947-2	2.75101769445097	0	1.40052375641325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156633359-1	2.6102066117676	0.416938966934236	1.28327058559613	0.324903392639169	0.745254189123659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0.729295484888209
Merged-chr4-135203906-1	2.73970128381362	0	1.34136188171659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101278779-1	2.51168036559158	0	1.48029905219705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11092295-2	3.53331018976554	0	1.39476148505495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32172256-2	3.14175884359647	0	1.33859300066357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25301824-1	1.88117416666749	0	1.43163602557253	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87007939-1	1.93876261712969	0	1.40004292264078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110558517-4	7.7953029188005	0.450240855694002	0.822724889522352	0.547255663986776	0.584203098832272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35970108214366	1.578845274708
Merged-chr5-92262758-1	2.63686634296239	-4.14250346476532	1.23810780183553	-3.34583423077049	0.000820354238707433	0.0162839817990814	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62619543659084	0
Merged-chr7-80780319-1	5.57848560237706	2.7870181329185	0.78170817698194	3.56529228551601	0.000363450915256208	0.00862319156061024	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53801272452425	4.06813872837081
Merged-chr4-55638558-3	7.62983407555187	0.848708874231622	0.570828525729732	1.48680179068952	0.137067168442513	0.778057048938527	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06469088532308	3.77350744446272
Merged-chr6-97972029-1	2.20775411680242	0	1.40031781465187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142399059-2	4.09461563946271	0	1.3351110180055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90511497-1	3.26323128304684	0.0751070431963315	1.14921033921487	0.065355349350271	0.947891074089615	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21675445404127	0.900948542443349
Merged-chr2-150919512-1	1.56328204885965	0	2.40476205155267	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35480280-1	1.98587035708483	0	1.43267122965019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69835473-2	3.2725901688924	0	1.32664220393974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136666481-1	3.01053978709267	2.10145118500063	1.06157012571913	1.97956888017836	0.0477519926956649	0.358914390923731	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.69686753743604
Merged-chr10-78295236-1	3.47044050041513	0	1.32883250514817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135242556-2	3.18899410064519	0	1.34498409115918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26446938-1	2.80015728694514	0.771491662006876	1.54793329911617	0.49840110193855	0.618201360251979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0.688405034366054
Merged-chr4-9648233-1	4.69902813125719	0.780608705041904	0.662687263776556	1.17794433017066	0.238818800579931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29589023220977	3.3192152751395
Merged-chr10-20763438-1	1.9905598309916	0	1.38062820085347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67958645-1	1.09655281640384	0	1.89655206456454	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42962359-1	2.79792510557658	0	1.42501368623375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20182411-2	3.83145871806112	2.73356551367336	1.19909117458806	2.27969780080523	0.0226256178362388	0.20640887331144	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr4-77221592-1	3.95575315763664	0.700468966138095	0.999088432401047	0.7011080735413	0.483235572250498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34478529767881	2.33904733505278
Merged-chr8-119123075-1	1.80620224588649	-0.778474872296595	1.06363840648088	-0.731898046886281	0.464230798383542	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8924145345494	0.666688015277142
Merged-chr2-88860506-1	1.95136909804303	-1.42080074711015	1.508509131426	-0.94185757149979	0.346265565080725	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57448248256324	0.469435083901436
Merged-chr3-96489711-1	0.800601695168379	0	2.01841957477208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56324375-1	4.41724880275487	1.56535134123164	0.82304535256111	1.90190168301256	0.0571840091354169	0.409641116088901	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02928942523154	2.31776252764976
Merged-chr3-146146286-1	1.43625776572227	0	1.69235662670833	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103341571-1	2.20691751058371	0	1.47975539501258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43058360-1	1.50232962098012	0	1.52596242328556	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34617011-4	3.90414910926767	0	1.31321356557418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101075151-4	7.54394028117181	3.81538434409347	1.04737486539612	3.64280685946238	0.00026968119030433	0.00685173422069281	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.428339764855
Merged-chr14-87452299-4	9.82153011259606	1.0022727549776	0.63909085356161	1.5682789847359	0.116816038178557	0.696406419098556	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85233699230959	3.50205079112018
Merged-chr1-92249056-2	6.22955146286709	-1.15922645750811	0.83520627930865	-1.38795227745135	0.165151577413591	0.886843206316747	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78639526847171	1.69641995825753
Merged-chrX-106165272-3	3.97443491973277	0	1.35545142363254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83067097-6	10.3178165006004	-0.845726861118614	0.57617880121444	-1.46782016161656	0.1421530793968	0.797898567794479	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49967068877474	2.35950768455674
Merged-chr5-117314009-2	4.44510278007278	2.28760531729561	1.15566033137784	1.97947896556093	0.0477621055942085	0.358923138418254	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	1.64538595732494
Merged-chr6-129113466-3	7.17188705138618	-0.198032773099786	0.729415279787411	-0.271495235413087	0.78601016373504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50896369391654	1.7751319800955
Merged-chr15-80258898-4	15.7261141427113	2.31113165005791	0.576375426178115	4.00976784416848	6.07784750969358e-05	0.00213758354880752	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21764215773097	5.38879992462358
Merged-chr15-31627410-3	6.12558660985939	0	1.3129665776532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134263099-3	6.59748295987186	0	1.33038947707844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99090722-2	3.79995852638167	3.6184736543338	1.16322778638842	3.11071803534577	0.00186633055971844	0.0307838701037099	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.36759862365701
Merged-chr8-122923662-4	8.41807198586564	-1.20244740895458	0.606754529150891	-1.98176915240718	0.0475050834770758	0.357428576268624	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73632483037689	2.30039026721351
Merged-chr11-97793348-2	4.8494131115129	-0.873391868019935	0.885805601649609	-0.985985939119648	0.324140012807287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02152833600612	1.04220233489076
Merged-chr2-103672793-4	6.1198276061225	0	1.29363836969568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117385026-2	3.36038080172873	0	1.37529035387716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118740137-2	3.02434708144377	0	1.37991097522753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91095567-4	5.59181459438748	0	1.30672960352419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33109244-4	5.86076448178373	0	1.30156608009093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66805632-3	4.11529022106003	0	1.31969100876717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15033839-3	6.26636832045415	0	1.30279942136016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32485519-3	4.62844249140557	0	1.33713047998552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111944991-3	4.49700545544589	0	1.30390623858153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17656060-1	4.5482178251651	0	1.3127010285959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69119036-5	12.6706440698155	0.789445866119977	0.467532383968692	1.68853729322168	0.0913081363899192	0.578723776968342	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71378889076042	4.59608053572817
Merged-chr3-55787618-1	2.09338608484055	0	1.34747889764105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120578880-1	3.14640564763674	0	1.33770741588927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122019405-2	5.00591234936183	0.713802272566127	0.834440818878062	0.855425880922103	0.392315420870631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63049640880704	1.628416560482
Merged-chr5-147437666-4	10.4406274957677	0.531078737369646	0.507187587290659	1.04710515532648	0.295051081883938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39620914916416	4.07148516135709
Merged-chr8-94397516-5	9.58634937044956	-0.966222509990085	0.679366870297686	-1.42223966494967	0.154956687571694	0.848981278281205	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04317141497238	2.0295486026821
Merged-chr2-29664268-3	4.63252508250634	0	1.30447445486771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164586322-3	5.93106325736976	0	1.31866619044595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68623637-2	3.92905543450744	0	1.32789031324812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57103235-1	1.65268124756274	0	1.41106522869778	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34586578-3	3.61989895932934	0	1.32538520567391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74134083-2	3.17988575338444	0	1.39416537746252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81372390-2	2.9357723071395	0	1.4008341693568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67051053-1	1.79076631939009	0	1.44966238895366	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4674253-1	1.58226200248345	0	1.48023285014122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96776872-2	2.92815387856161	0	1.36738311548611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-63936876-4	6.61238436382989	-2.9424396076102	0.885280762128546	-3.32373607728183	0.000888202101123217	0.017343069732447	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5289144285873	0.581381506691384
Merged-chr7-16931018-3	4.14556441094152	0	1.32921962804415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35104866-4	10.057613201592	-0.736865006277848	0.507823662002189	-1.4510253487847	0.146772801794312	0.816187176074471	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86809168813673	2.74700001162876
Merged-chr10-96132346-2	3.44735646444766	0	1.32999577799337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63985856-2	4.13010040954298	0	1.33488200854952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35215667-2	5.22625575267137	-2.67760638133312	0.875865049766633	-3.05709924382363	0.00223490267304731	0.0352705378398575	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20195709577556	0.843323834477631
Merged-chr10-88228803-2	4.1986123773597	0	1.31872503513596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61907344-3	3.55026780868318	0	1.33143575478029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27227619-1	2.44997261802123	0	1.39927427771739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103874528-3	3.96228134270143	0	1.34189317565991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70817361-3	8.23290679014021	-0.948740018655159	0.707232505332006	-1.34148248490046	0.179763852683311	0.943446206525068	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08935397545957	1.72597142609953
Merged-chr6-125448646-1	7.30118392223202	-0.96129009753814	0.700482274363782	-1.37232608549765	0.169961948596467	0.905822969002293	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45427396042877	2.14003775127292
Merged-chr15-76472688-5	13.0664977934839	0.703511328653919	0.443861096744486	1.58498082804248	0.112970690293712	0.679373307853771	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18819710816133	4.99110768757042
Merged-chr5-3195616-4	3.48847011703252	0	1.34495482799512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75639766-1	2.81118337165874	0	1.38451787318645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6055032-2	8.4277166314912	0.542634310776309	0.440138363301329	1.23287210573101	0.217623483994998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73929956200282	4.17438177026974
Merged-chr4-141471942-2	6.86407001637363	-2.06298821101997	0.853517503810611	-2.41704265209507	0.0156471835108141	0.154710372779188	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20486643898321	1.15307255889252
Merged-chr3-104012156-2	5.64838009996256	-4.04370624460976	1.06280071424512	-3.80476432731972	0.000141939267547029	0.0041780015212289	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51022616834873	0.306240821987646
Merged-chr16-88372231-8	12.8489499530554	-0.251610904741962	0.502931563630758	-0.500288554024201	0.616871912377531	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57377761400476	3.8032867911207
Merged-chr7-105726574-3	4.64016634761413	0	1.31373579530852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32698420-4	4.35825684757205	0	1.3201268390607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109480766-4	8.61155909358178	-3.51700794584853	1.03053487349746	-3.41279857314522	0.000642994485637588	0.0133897761817954	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19242490244062	0
Merged-chr18-21700120-1	3.28362297859318	-1.29600690464663	0.995480745106634	-1.30189047956704	0.192953827454579	0.992659487391507	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12747904257509	2.12164305972745
Merged-chr2-30246709-2	2.72448314718799	0	1.36132927085788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-42762079-2	3.95477928661	0	1.30548902867649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39539851-2	3.56647891937761	0	1.33034235402327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90965007-2	2.80900457296985	0	1.36854618527314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55792627-4	3.20923075564719	0	1.35009854641776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-85374238-3	6.86014751490357	2.57333129897435	1.11922859621181	2.29920081356407	0.0214935388453337	0.198166112406859	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.19133112147929
Merged-chr12-8320246-3	3.85616949075939	0	1.32212364893334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122548820-3	3.65776625640023	0	1.33187089522221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61868246-3	4.82184953545752	0	1.31497407721156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61817887-2	3.28086789876693	0	1.34465974846578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88091818-1	2.9685608990027	-3.38616248324972	1.24055484692608	-2.72955483720865	0.00634199003991256	0.0782374327257176	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92377038824176	0.306240821987646
Merged-chr18-67209934-1	2.08401098697333	-0.711260608304572	1.03805478233131	-0.685186004063474	0.49322655453858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52594941085541	0.961728545204858
Merged-chr6-34035504-1	1.5181946296	0	1.56880802060465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24828630-1	1.60005629610745	0	1.80370794385553	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12729193-2	3.16692935658458	0	1.35839023097913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72373068-1	1.06627126504801	0	1.47576821294189	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159697101-1	1.0458848668024	0	1.72278058118083	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83414721-4	9.15535413223517	0.527207833271352	0.64418312290986	0.81841298618611	0.413121408998604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45226600826709	2.83209945520084
Merged-chr9-66916681-3	4.84978471142192	0	1.34403106331667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93518513-1	1.92346517270733	0	1.38200159490855	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127532609-1	3.99952935804126	-0.0770285929348949	1.18377272602085	-0.0650704237745194	0.948117928918405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.576613669504516	0.581381506691384
Merged-chr12-8520729-3	23.6930005055894	0.256757529399689	0.398944705256445	0.643591771031633	0.519840187779754	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.30479630955325	4.4219347674513
Merged-chr2-6791785-3	3.32001111487673	0	1.3180705413169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111122705-1	1.70212477166976	-1.7287718023113	1.4361549517307	-1.20375019438395	0.22868614525902	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27336586657335	0.733321818366247
Merged-chr7-56013674-1	2.08189136884753	0	1.48185351677479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128703691-1	1.14321052691149	0	1.70752328701096	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83282340-1	4.91833482154186	1.97390372859892	0.987372093451674	1.99914879272971	0.0455922571748356	0.346749492242412	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13464865754287	4.51204335593952
Merged-chr16-57535816-2	3.21359966911954	0	1.37513165930428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45592448-1	2.50664789005186	0	1.42783881115416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127542586-1	4.1925906959667	1.44018172705621	1.24048322483668	1.16098444398216	0.245648225677069	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0.73596151290311
Merged-chr2-45274207-1	1.30715025745314	0	1.79500672385032	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91112638-4	10.7625711726971	0.854994803545925	0.609987422713777	1.40165972560899	0.161016882663842	0.871587907103329	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26094989607286	3.63197117363898
Merged-chr2-4381106-1	1.48700077143656	0	1.59717859478508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59043190-1	3.11732690439745	3.69207544919624	1.12108834784538	3.29329571241378	0.00099020270157737	0.0188866858544293	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.16022678139939
Merged-chr8-106970978-2	2.3201652101013	0	1.54692428322589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123024662-2	3.34504706933914	0	1.33075248805583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-86329484-1	3.49556741796733	3.5961961462031	1.21294870896983	2.96483777064027	0.00302842584998244	0.0446414427234271	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.814777624442019	3.46769659198498
Merged-chr1-154103147-1	2.13758527414455	0	1.40015239913764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95046614-1	1.18952248208395	0	1.65741129065336	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29734482-1	2.01630647295407	0	1.37591625283816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73034199-1	3.44703461610585	0	1.35782472390643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70850871-1	1.77736829585762	0	1.46339825994379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66711395-2	7.86909234000806	-1.39645499616094	0.785708913926987	-1.77731850995738	0.0755158498754578	0.50369079574989	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74315077801145	1.27911570690487
Merged-chr1-173936865-1	3.54466122905041	-0.668564903383111	0.912703991018544	-0.732510112766153	0.463857272554432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07120676334978	2.18907334447161
Merged-chr12-59052629-1	2.64588935543946	2.31581365984371	1.31985451581523	1.75459767125417	0.0793281500810632	0.521931319013228	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr16-25008246-1	1.60064684068239	0	1.55446334964476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104133952-1	3.32542152759879	-1.09441082446225	1.22088941723011	-0.896404546568346	0.370036739936624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76661564045667	0.735627456805112
Merged-chr17-35434916-1	2.23783467018123	0	1.45801020016667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108956693-1	2.62924309942244	0.566335222376507	1.0339554796296	0.547736564614356	0.58387280148658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26796860891412	1.57272540080272
Merged-chr13-63038045-1	1.18748963045147	0	1.68590659260398	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105408617-1	2.81564115511475	0.757710117161832	1.48494727944342	0.510260618441506	0.60986888888381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.918668513615376
Merged-chr11-100695119-1	3.22504118124741	3.81607678410359	1.06260621735294	3.59124266523662	0.000329105027901692	0.00804251950383844	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.88903407179563
Merged-chr5-17982972-1	1.05192022471894	0	1.65560630276298	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19938522-1	1.70441727120805	0	1.39942589815619	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119596477-3	4.4494867010485	0	1.33641760176173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44825084-6	10.81879096573	0.43314169411359	0.534564374267713	0.810270408885628	0.417784778557734	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83102889838212	2.76139440711178
Merged-chr3-123103411-3	5.45491705652122	3.69422151386666	1.0034737312654	3.68143320424358	0.000231926553783908	0.00611847904059882	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.57270279668386
Merged-chr2-16359545-2	2.93876200967142	0	1.36154897887551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103957083-2	3.58869171009119	0	1.35014567217329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145861755-2	7.33257300521652	0.0419199730319399	0.681855817541013	0.0614792335176028	0.950977552369234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83274765418681	2.86542081238282
Merged-chr5-24043170-2	5.80183377361733	0.0386114924739617	0.78701243235865	0.0490608418449559	0.960870809487744	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10365587347514	2.61823775429303
Merged-chr17-84112246-4	4.6266386600089	0	1.30563903299969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59245033-3	4.59373329268139	0	1.35915254473595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170632566-4	4.63226672235819	0	1.30324901369784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66121210-4	4.21289502876582	0	1.29879095798948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91208725-3	3.63155234666514	0	1.3794791480466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129614876-2	6.33689378159956	-0.396905556155279	0.8217163545752	-0.483020149161405	0.629081429607252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90376728627297	0.793480537552656
Merged-chr3-75297651-2	3.84971522837977	0	1.33470982076345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113469696-4	8.72745756031666	0.37480182733849	0.543666259035701	0.689396888457405	0.490573540977001	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23128631924546	3.45912896501731
Merged-chr9-89204424-2	5.05251554943287	1.30986714691266	1.32476106492283	0.988757279780837	0.322781910330187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr8-46151688-3	8.8295714502574	0	1.3048985915441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43653938-1	2.94074902296819	0	1.33617841494086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105216631-2	3.40259187455909	2.50112472251604	1.2461419613458	2.00709453665687	0.0447395978529984	0.342416697271262	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr2-24316954-4	4.57106004422278	0	1.30509539087926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59680157-2	4.99583272138505	0	1.34130119182302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86191992-3	8.67337517858533	-1.78207401735428	0.594896893191799	-2.99560148615489	0.00273904139256177	0.0414030531663987	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94894383402135	1.57664565284388
Merged-chr15-97449158-3	4.34213302751367	0	1.3089058644853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122811894-3	7.46666199010859	1.26575595735786	0.69209305630564	1.82888116825561	0.0674174119287913	0.462466743638337	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71911744162738	3.43926325819881
Merged-chr17-17589129-2	4.0371210138653	0	1.32551562731419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114439941-2	3.21182131789897	0	1.34699810179447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104431857-1	3.0280598281085	2.43613766301417	1.36923023407397	1.7792023593912	0.075206591710335	0.502062889955251	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr17-10444748-1	1.45831937179342	0	1.40038037131741	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36162551-2	3.2391203438309	0	1.35916346612459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170286190-2	2.56310707580187	0	1.38464400426482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10771438-2	2.3061584661168	0	1.52799192661673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4826807-2	2.19927411340616	0	1.62229956944485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-43218949-3	4.26176865409059	0	1.33621997469692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-110470085-2	4.82827889638618	3.87211329005294	1.2603535488128	3.07224373168965	0.00212456172623564	0.0339612799437928	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	3.18637731361239
Merged-chr14-120326614-3	5.34828651112608	0	1.29705202538063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32170289-2	6.5828007937919	-0.21104956096168	0.771113677782925	-0.273694485057614	0.78431941627804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14771249531142	1.91160626283417
Merged-chr15-82882087-1	3.05487422486212	0	1.35254629041349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35479684-2	5.40010156438929	0.52655804610271	0.569260874996163	0.924985484214524	0.35497345814116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59958643574255	3.479270142157
Merged-chr12-77000277-1	2.85566628448397	0	1.35156371105144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86906304-2	3.3831853592528	0	1.32372515271078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58225838-3	5.25940488682478	0.11164099979979	1.30926496312882	0.0852699819698796	0.93204675551145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr4-11481253-3	4.06675727216608	0	1.31564086916769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148958924-4	7.15045698031402	-0.590057033217136	0.717258632877382	-0.822655881951591	0.410703710574441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7440378296436	1.80363332130919
Merged-chr16-38789181-2	2.96964373189035	0	1.36696081262129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75684246-2	3.40379669398727	0	1.3852468578517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27631719-3	3.63710702678084	0	1.34848459110145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101856727-1	3.23091273922547	-2.52884368589029	1.23403063886213	-2.04925518561037	0.0404371683159671	0.318669464637625	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06010594835573	0
Merged-chr6-145245431-2	5.7961615775251	-0.897402225901996	0.65011512694918	-1.38037431941212	0.167471422930444	0.895913843865151	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40268706915752	2.54521574930737
Merged-chr17-24360037-3	8.8202227646284	-0.697666519335414	0.692184048170492	-1.0079205396013	0.313492610313347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80755801068796	2.64660126549176
Merged-chr3-79861146-3	3.53762348257742	0	1.36130643968656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79757798-2	7.71654226323851	-0.410491508502128	0.626364328010409	-0.655355821117747	0.512238688620024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99964899536052	2.42002161374056
Merged-chr18-62183866-3	7.82106687277161	0.308002580353616	0.653190298736904	0.47153575451015	0.63725819308174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08600603960406	2.21307952544685
Merged-chr19-11497455-4	4.36974999300458	0	1.35812865294027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129213742-2	3.3726146835624	0	1.37034948817545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118587836-2	3.04749750924242	0	1.32757922999448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85577953-2	4.12028863409094	0	1.32210127440103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36127797-4	3.9559086242494	0	1.36491799812409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73574677-4	4.79890817303212	0	1.33513164309238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34621100-2	7.28565121768104	0.209356002579097	0.561795438714061	0.372655219590798	0.709405069030225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26123896405828	3.45468391198349
Merged-chr16-38130712-5	12.2293286510907	0.56230018283338	0.453131860948953	1.24091954526395	0.214635471628216	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48363367877285	4.33579404716024
Merged-chr2-118487159-5	15.5416781910289	0.505061294359692	0.467985405988254	1.07922445421806	0.280487680780122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85213592746826	4.10198491879375
Merged-chr2-118295664-4	8.62964318969884	1.27980287672441	0.701937872593094	1.8232423789823	0.0682666890934935	0.46672474006104	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52567343188366	2.35204052049844
Merged-chr15-50751245-3	6.01590296528983	-1.1398468479803	1.06629041288936	-1.06898349099063	0.285077108457957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56905550713771	0.581381506691384
Merged-chr9-94512087-2	4.70761046870439	-1.19598772944243	0.87746652733203	-1.36300097176228	0.172882204351778	0.917945927161067	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70337888089062	1.77128661274154
Merged-chr6-37448084-2	4.30052606711173	0	1.33136181836316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55711138-3	8.88504755529053	1.92492091583603	0.711207834773816	2.70655189906367	0.00679859548055696	0.0823315456398212	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31383758962217	3.84822737271812
Merged-chr11-84290866-4	8.85825793921917	0	1.30180542919763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36117166-4	6.18799510696177	-1.75170518859754	0.784085130965708	-2.23407525460925	0.0254781218918056	0.225687048006226	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97592026213794	1.04885222765555
Merged-chr12-71808234-3	4.13450311979329	0	1.31068796766044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82067189-1	1.51574597036953	0	2.43324661737931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87327120-1	6.18230731726566	0.609557528761138	0.688689347666432	0.88509794848225	0.376103805838912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14197043655296	2.32972687237742
Merged-chr16-22043985-1	1.44995622151645	0	1.54893611210213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166001596-1	2.50420723614493	0	1.40386083266445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99175344-1	2.73097916293432	2.2147218267525	1.23793096410002	1.7890511595391	0.0736065767826144	0.494387436163709	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	2.41564793337539
Merged-chr2-75650592-1	1.75255881994923	1.93214024661375	1.46215313690036	1.32143494265568	0.186356381428933	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr10-44527331-3	6.36866776808824	0	1.3012159195398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122105607-1	2.79334397543485	0	1.35314896764345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118702267-1	8.45552410341271	1.06120405060589	0.78205699731329	1.3569395251901	0.17480042668562	0.924600022842686	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38580247689162	3.7590793604206
Merged-chr5-4912097-2	3.69011595987188	0	1.3164946114756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41193751-2	6.50537777543855	0.63096112154377	0.809087812560253	0.779842573017106	0.435483543966289	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01604015808476	2.50075654150023
Merged-chr5-18013842-1	3.65338591739482	0	1.33902781999088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12240564-1	2.51571669674144	0	1.3590049506869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55937952-1	3.09647283282453	0	1.37174159022792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76053321-1	1.82477793257986	0	1.3949587364277	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112813164-1	2.50577446818508	-2.31561486891717	1.41939121525495	-1.63141411897582	0.102802967701842	0.634556895734233	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11972447289861	0.581381506691384
Merged-chr15-53687353-1	2.30735463363366	0	1.34085330005023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37082413-1	1.33203773152113	0	1.46372141370397	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-35897882-2	3.51320983247102	0	1.33840941533662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8438813-2	3.91961525326888	0.266941539706877	0.987665855045854	0.270275152616756	0.786948579593799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60966811945331	2.43282905033915
Merged-chr10-21224445-1	2.02741460280435	0	1.41892651308129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104823369-1	1.95064793733758	0	1.47486378041084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103111288-1	1.56850296347661	0.577957109142028	2.36598930839375	0.244277143219383	0.807016184419758	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	0.563523181795778
Merged-chr2-136914545-2	2.9964428394797	0	1.35136172084441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134614936-2	4.9021565898653	1.53528887759787	0.823085591650929	1.86528459879661	0.0621415227622402	0.434997316167258	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09428733769552	2.05066483796074
Merged-chr9-109894947-3	3.8206084958975	0	1.3233825471793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31347329-3	6.29288650410035	0	1.31097620935619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79628195-2	1.99130704575568	0	1.41215417665543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79302598-1	2.82215167972352	0	1.37566910293051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171567016-1	2.5907344859214	0	1.34136536450754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45610470-4	4.64869501728716	0	1.32194169890765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32762661-3	3.4299222949889	0	1.35781754631784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136121537-1	3.75378811095667	2.8649058840187	0.867453408090235	3.3026625491345	0.000957715627107372	0.0184392708806595	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	3.10721250591398
Merged-chr5-122044751-1	1.02604317332715	1.57708150848997	1.67051870734019	0.944066954509607	0.345135434701897	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.581381506691384
Merged-chr12-25150881-2	6.19118590896188	-1.36176099322418	0.732832897283181	-1.85821487855228	0.0631385059700378	0.440419386327721	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37561567537545	1.85297260998396
Merged-chr10-78455573-1	2.16555170192641	0	1.37457914293729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91087187-3	6.21373579705882	1.49039588571886	0.573534023933678	2.59861808284142	0.00935998463505414	0.105382073735742	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07282788938398	3.82463011700247
Merged-chr1-33892979-2	2.91999233426699	0	1.37209376233783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36958121-3	6.6500439233077	-0.163664708960152	0.88336318388795	-0.185274541598863	0.853013705186027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17789877512918	1.0023426291647
Merged-chr6-140763753-2	5.46571167120657	0	1.32671797770996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116619536-4	13.3653441120842	-0.638866434155783	0.409464724624871	-1.56024779604904	0.118701334685074	0.705278906740391	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11773389428956	3.53962748431946
Merged-chr1-161748301-4	10.3291956680347	-0.36157900910666	0.47892631687299	-0.754978368003423	0.450261961806366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.93304770655087	2.89762895552055
Merged-chr1-13531688-3	3.95135663824021	0	1.32222641803827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101753822-3	5.94658792344439	0.769019997327004	1.30184944562335	0.590713465303036	0.554712424233817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.306240821987646
Merged-chr15-74962288-2	5.75994952446513	-2.23319342398243	0.724994708540813	-3.08028927338952	0.00206799635018119	0.0332222280414528	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64791328384836	1.56586581096048
Merged-chr2-164360441-3	3.07355113426744	0	1.38943112717146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41973971-3	7.11020298876303	0.104571208342721	0.802498414151858	0.130307059177481	0.896323495275467	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66533962555719	1.76628008406346
Merged-chr12-105972492-1	4.21269195690843	-0.85233299127482	1.20324769536486	-0.708360377134455	0.47872149164294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.655578355042913	0.306240821987646
Merged-chr6-34754664-3	3.96107101611814	0	1.3041632289887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39345672-4	8.32114645089144	-1.24945323334287	0.621132789544678	-2.01157184804039	0.0442650894850904	0.340094139327736	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43476300841205	2.37870777569119
Merged-chr15-67434487-2	3.652895832895	0	1.35989917510481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105025495-2	3.26822103166698	0	1.32221632390808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11060557-2	3.74317309358042	0	1.40735802831202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116615350-1	3.60658024044035	0	1.31799825454599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87331300-2	3.85480587633409	0	1.33698435847868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119782913-4	5.38183638770773	0	1.29549799019129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6300595-3	5.11762810702648	0	1.31754219219671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78331712-3	3.8302244327144	0	1.30909023516661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64195461-3	3.97990644120591	0	1.33130884966709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103316628-2	3.90847410297066	0	1.38264175296837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86140489-5	12.5287256263508	1.2943227320287	0.51475127002025	2.51446243537735	0.011921400190973	0.126648645241314	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96513824269073	4.36262901807605
Merged-chr7-19590058-2	3.78353537269395	0	1.3167176963385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96373683-3	5.01382565462333	0	1.30936175704222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125177194-2	6.79170442838555	-0.0476044688894469	0.638356088381756	-0.0745735331045797	0.940554032993404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98929706876306	3.76270646759858
Merged-chr18-12218697-2	3.29517549858651	-4.0876066551249	1.10794886064882	-3.68934596198888	0.000224831308210566	0.00597471600907997	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83251836296859	0
Merged-chr6-59178192-3	5.22908256300231	0	1.32036864552645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96504281-2	2.7453146144499	0	1.39424382644772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5236724-2	3.62295307842681	0	1.32101127721871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53265797-2	2.87622432802917	0	1.32947651948651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76337293-3	3.28408659845934	0	1.33634356335771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56378076-3	3.88213919243308	0	1.31124539081763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114883473-2	2.74528780851961	0	1.358696812848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54815127-1	5.02029722468029	-1.43518228578979	0.819382285536154	-1.7515417542261	0.0798526355614227	0.524398684605222	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22746158885653	1.45063110846411
Merged-chr4-58952126-1	2.65809426099463	3.78820080212763	1.11595577364649	3.39457968818006	0.000687340336825785	0.0140887520860156	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.87822650685341
Merged-chr13-54758567-3	3.85681189092597	0	1.326368345528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53318692-1	2.61210189466067	0	1.46135402599124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23466416-3	4.85247938654368	0	1.32155208847246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38519591-1	2.41328740747554	0	1.39144570886133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91502184-3	10.8109874383242	-2.03283626691409	0.588250428678991	-3.45573274205537	0.000548799170250502	0.0118044208621426	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.5082764601772	2.59719856194818
Merged-chr15-78623618-3	4.2214078003573	0	1.30881703517976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157142184-3	4.56659404704973	0	1.30289350338939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108170660-2	2.9251224522347	0	1.34408622912353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99460216-2	3.80312986437578	0	1.32284577016429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101494030-4	6.41526437420365	2.46387683680107	0.974476790697386	2.52840997376427	0.0114580467573764	0.122976540542451	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	1.64254215594465
Merged-chr10-19103221-2	5.69287679723183	1.06338199232395	0.937337817716772	1.13447038220884	0.256597290604604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20071055075273	1.64500873683875
Merged-chr11-79083728-1	2.54519071150989	0	1.41219096917086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41228863-5	11.9905177857929	0.50057426652905	0.491716881188601	1.01801318132304	0.308671691939733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40101248319041	3.13476220989799
Merged-chr8-61575323-3	6.33959834520939	1.31411063717172	1.05650317707594	1.24383027489681	0.21356203541908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.633507577814654	1.15637648126681
Merged-chr14-105505218-1	2.69302547811164	0	1.36115633360389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8468973-1	2.89771963784789	-0.932232221049697	1.14318065895737	-0.815472352287637	0.414801984062767	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31537514610051	0.688405034366054
Merged-chr2-59670505-3	3.18324003485636	0	1.34064722929725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30614687-1	6.46281148348603	-0.542288404315088	0.674546406234911	-0.803930462459889	0.421437135968678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27248243212815	2.98459585107782
Merged-chr3-9398458-4	7.89117180353303	-3.43113174885806	0.991386863624685	-3.4609413083337	0.000538290155285928	0.0116396785199584	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49319474198661	0.688405034366054
Merged-chr7-145090260-4	6.21864099196561	1.28409043999942	0.723136054773619	1.77572454246029	0.0757783301612366	0.504874669934356	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1926101768423	2.28417914267792
Merged-chr14-45652863-4	16.0169599536196	-1.57454879198432	0.617991344723726	-2.54784926265954	0.0108389293980019	0.117987786180548	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5320999102539	1.31996877971892
Merged-chr2-90488489-2	8.58401832345898	-3.3792974112707	1.00562133742206	-3.36040742724656	0.000778276076012986	0.0155955929049815	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99694968428024	0.423054662900563
Merged-chr14-104299306-4	3.5664704982425	0	1.35991068809694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92038221-2	4.58011765490545	0	1.33596012985563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43332678-2	8.56339082972527	0.402172790639976	0.550909170474991	0.730016511239457	0.465380092087915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23547422197144	2.91649491165338
Merged-chr9-64793093-2	3.51215056287852	0	1.38011829969258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94159696-4	4.79518481334568	0	1.35326420069192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71149708-2	3.63213458304556	0	1.31543819864495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126681249-2	4.96056413992342	-2.0720510969202	0.794745195869654	-2.60718920691662	0.00912889011615395	0.103367952439819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88881271353656	1.35700371934843
Merged-chr2-44345597-2	3.1127752006627	0	1.34268181077186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54822086-1	3.48187615689138	1.94947023350701	1.29668821805827	1.50342249305407	0.132730129878035	0.761290535154046	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr1-95604017-2	3.16643113267835	0	1.35756277271226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24823480-3	8.81393853562054	-3.17994254898432	0.792196465744934	-4.01408323122736	5.96772873129918e-05	0.0021033829648084	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.18834295303398	0.989878296978726
Merged-chr17-23982312-4	7.55895237391415	3.63193231505468	0.928806633101657	3.91032125053436	9.21734499585007e-05	0.00296269860353575	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	2.62234012822677
Merged-chr8-84277136-4	11.963279793744	1.3351442684808	0.470578035634225	2.83724306571458	0.00455049551205905	0.0604760464815337	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33102730309451	4.66926647231772
Merged-chr4-94999369-2	5.05536956484591	-1.35556468380945	0.783718148801126	-1.72965840574585	0.0836913242847253	0.542495117221472	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12710186713774	1.50871668602081
Merged-chr5-64299818-2	9.20453613519858	0.313560947991158	0.543992032039379	0.576407244083421	0.564339949131639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06718040356992	3.56779666681302
Merged-chr3-69404001-2	5.3672104090425	-3.12227726230429	0.897979230253946	-3.47700387393294	0.000507050491414545	0.0110963568024028	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82381760845775	0.733321818366247
Merged-chr13-81135703-2	3.11510732104779	0	1.35843381830132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140684575-5	15.0910269080573	-0.228085571705453	0.404328282765306	-0.564109861782403	0.572679366928832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95927211382748	3.59798975858165
Merged-chr9-70651120-2	4.796523563221	0	1.34801327582828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149549421-4	11.3395573398832	-1.06475674629973	0.478456613266357	-2.22539874416363	0.0260544817772862	0.229664434104763	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17526996767753	2.67177396938878
Merged-chr12-26206981-2	4.66475306529295	-0.593130517171305	1.0275348932504	-0.577236375199927	0.563779787576701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77297654923403	0.905469781553611
Merged-chr7-97425018-5	11.439425799781	-0.783107648614988	0.521311217003043	-1.50218837246009	0.133048466877573	0.762781638584129	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99411771714885	2.58643281934517
Merged-chr11-104448683-1	3.0145153489696	0.334800843831782	1.09936203016227	0.304541028929628	0.760715739609469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	0.73596151290311
Merged-chr8-60865793-1	2.64088166257701	0	1.37763434515572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165015083-2	3.26178172229905	0	1.33615531914219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108132958-1	3.88523247719071	2.95710728540698	1.15399948264942	2.56248579818934	0.0103925837893839	0.114271206512045	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	2.75385952640166
Merged-chr15-67321708-3	12.2577898479607	0.41913994956441	0.500447291341312	0.837530658705376	0.40229435113003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95935152670547	4.45171100068592
Merged-chr2-70842403-1	2.2265045248108	0	1.36557451609466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144586863-2	4.48858687116108	0	1.36119132352521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9711261-1	1.31105589773183	0	1.48304882042603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21011014-1	2.27025890144997	0	1.37559879930434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76366818-1	1.99900563476653	-3.09891192082704	1.31318241117228	-2.35984878754249	0.0182823854999518	0.174865451241196	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98014480423936	0
Merged-chr3-68744515-1	1.87199567231334	0	1.4065410130873	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92245646-2	3.06765592743279	0	1.3739111712929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124710292-1	12.630475515955	0.726181235530166	0.443131428493986	1.63874911332321	0.101265520939278	0.626816020772765	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19377198380823	3.83288744651021
Merged-chr6-94574813-1	2.50463658086247	-1.41224063829576	1.06423620567464	-1.32699924205314	0.184508933390686	0.96140026802869	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53870187464011	1.26501898168246
Merged-chr14-61588594-2	2.66447832378054	0	1.49145165338803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37960075-1	1.31920910194055	0	1.51435407635252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34874427-1	1.88519170349764	0	1.40092402175627	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58734829-1	2.16741537746722	0	1.36444553854179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-103367262-1	1.14557770653751	0	1.6320049307848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-11338413-2	4.013344136764	0	1.34693572248142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159189895-1	4.25390044276539	-0.522750590627146	0.725948116902228	-0.720093596850738	0.471467369683353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18929591068757	2.37705875126183
Merged-chr13-107995541-1	2.76298472239837	-1.53206827548141	1.08512279357689	-1.41188470516895	0.157983911922051	0.860240637598924	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14803934901686	0.905469781553611
Merged-chr6-124262899-2	3.54399321714237	0	1.36316208526819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31938708-1	2.15933727276761	0	1.3974168965159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108384705-2	2.82408533253865	0	1.37964167582877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21431192-1	2.92024576023649	0	1.33024380909071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42608486-1	1.51921215402959	0	1.50317996533553	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124627293-1	2.38231085424415	0	1.36334098387611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95841480-1	5.57817108532266	0.195327270067224	1.02072583397601	0.191361150629813	0.848242654882042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40125985091894	2.07188952960158
Merged-chr9-46119209-2	3.43401469327749	0	1.35117622245701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96465690-1	1.62177857110401	0	1.38930043254107	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17898496-1	3.13230779474106	-3.74025299285584	1.24396011916332	-3.0067306300555	0.00264073651571718	0.0402710777960454	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01990365636931	0
Merged-chr3-94425934-1	1.15288906320505	0	1.81060426177848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46547774-2	2.8260178288022	0	1.34925103391102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57132454-1	5.04393474273015	-1.08807828281607	0.835851016649062	-1.30176103293885	0.192998088376172	0.992740831941442	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87407373052538	1.81534621159246
Merged-chr6-54667945-1	4.76896533038248	0	1.3078957512127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49495871-1	1.41976288989741	0	2.42899227784504	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-93962506-1	1.71073116197245	0	1.45055640512566	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62654093-1	2.77746897947646	0	1.33839135062448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148580737-2	4.20116920518965	0	1.30261322063155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24785941-1	5.08571824315464	0	1.32224339901764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45024271-1	2.02649275250346	0	1.45437963100827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71251917-1	2.45641068073547	0	1.48156808439491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14464338-1	2.75113536999638	-1.82792595690129	1.09784007662776	-1.6650202482279	0.0959087162198679	0.600690021749951	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45624294853588	0.733321818366247
Merged-chr13-118421057-1	4.40757152215378	1.84498545710256	1.035046798788	1.78251404599577	0.0746654427641391	0.499701763914936	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	1.31470332505763
Merged-chr15-97878915-1	1.96351472404134	0	1.55846598986816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77468892-2	3.38381402605657	0	1.32734068920998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44392989-2	5.44638342269129	-0.373588043022822	0.721203305996039	-0.518006559200208	0.604453692926308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85691768596178	2.43716890480691
Merged-chr1-4967195-1	1.59919151009556	0	1.54004666613111	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5443748-1	1.66311569833644	0	1.55415252297066	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95974143-1	6.48586633471723	0.675152425927672	0.643511923310852	1.04916847920087	0.294100583212962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1885860673341	2.45349577151173
Merged-chr4-119707989-1	3.12804514841275	0	1.35579789565706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131246837-1	1.43529825086514	0	1.46212335050432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24979250-6	15.5838241473668	0.784992278413744	0.446946005531334	1.75634700545212	0.079029175701204	0.520798761130585	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50862592653156	4.16029942234968
Merged-chr19-16033467-4	8.79073810396804	1.09151103904462	0.542054111853122	2.01365696740694	0.0440455609541359	0.339090625130651	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40115010463711	3.54686005535586
Merged-chr9-44477835-5	10.6991257354726	-0.510643230144562	0.938275617210749	-0.54423585221427	0.586279183330242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.966217637789985	0.581381506691384
Merged-chr12-3409186-2	2.91568156886386	0	1.35815227673462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65598478-4	4.26266385080465	0	1.3224790841203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71439645-2	3.41560231945852	0	1.35433621749575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126114188-2	3.47357898150931	0	1.33431841675596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72946141-3	4.33417894163922	0	1.32298221384575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119359800-4	18.3130972734012	1.37915317569152	0.356049393800871	3.87348834095429	0.000107288541619759	0.00335127965615906	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8420510504012	4.95700226492672
Merged-chr11-100295515-3	4.24188189418807	0	1.39743509143852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8455861-1	3.84111747252558	-0.408240449040969	1.22317798571246	-0.333753921186851	0.738565257020761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760552225909557	0.469435083901436
Merged-chr6-108773137-3	5.01940634526593	3.13902310597565	1.10225683295508	2.84781460375268	0.00440205606589743	0.058994412568116	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20539659680455
Merged-chr6-97334746-3	11.8070269508434	0.415517290449067	0.502561890732684	0.826798247362697	0.408351423605689	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57965988570859	3.94361456547693
Merged-chr3-105928374-2	3.31840359913183	0	1.31316185218251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33263849-2	3.00573796875805	0	1.35442908153277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56069105-2	3.22846362331073	0	1.33964289921307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143844634-2	2.6132811980918	0	1.35080267138401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48655848-4	4.29982084346228	0	1.34072876472258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98387787-3	4.57001473862904	0	1.35956846557541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34533217-2	3.39104397252922	0	1.3086518224544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125574421-5	8.99267781828341	0.324048104526655	0.522590476877942	0.62008038581679	0.535204864813711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92349084580667	3.3575037581034
Merged-chr13-44679421-1	1.46138255748149	0	1.64207472041558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84411468-1	2.05173597184462	0	1.36731775360936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70703328-1	4.10454109258587	-3.99181884787636	1.0579078356859	-3.7733143788355	0.000161093084999812	0.00461903849600602	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97849463411859	0.469435083901436
Merged-chr3-105865296-1	2.22241914800904	0	1.47793628915972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34238121-1	2.79509742553191	0	1.39846418205933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16149426-2	4.04438508843235	0	1.35839315603549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-75034347-2	4.0353249752442	0	1.32938311221292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122782319-4	8.15322390746412	-1.11183051354305	1.03689126453915	-1.07227300640555	0.28359742741436	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1873034657488	0.609949614787909
Merged-chr1-156046181-1	6.77450945395675	-0.149680772742903	0.716720882976189	-0.208841093231933	0.834572290812973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01352649514934	2.19361279780801
Merged-chr12-112670862-4	4.75332233626608	0	1.31231028204078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-7405280-3	4.52132745759481	0	1.31846146074813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4796187-2	4.20169475382219	0	1.30359527578862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85071102-2	9.10589042982624	-0.102186607637402	0.719912042525279	-0.14194318416866	0.887124883596288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26879431644558	3.67680357671556
Merged-chr1-193060359-2	6.91820313450306	1.71387776124115	0.736717858705989	2.32636923482688	0.0199988614068761	0.187307667692952	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75448787967442	3.19702738253442
Merged-chr11-80178455-1	1.87097811041262	0	1.3948440748019	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88226342-2	3.8367087739205	0	1.31952257111349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-38478757-1	1.29290552770072	0	1.48546332365657	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68579917-1	3.14603690873748	0	1.36340796599611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47901881-2	8.87174556514415	-0.0962339292370874	0.637270852359573	-0.151009463057615	0.879968251065723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55622837124285	3.73279563801136
Merged-chr7-111014384-1	3.21565458959261	0	1.35823879646715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65001639-1	2.66881935974331	0	1.39480768804328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156241909-1	5.32563061427325	0.687155787075824	0.671911551913869	1.02268785991033	0.306455453191784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98359537354192	2.70275322934241
Merged-chr1-64573378-1	1.81488783992698	0	1.40929531039977	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64836780-3	8.21154743743371	1.19297114098628	0.611573700126456	1.95065801675187	0.0510977407147535	0.376599474966884	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07150489739201	2.79420875551841
Merged-chr2-22806478-1	4.02485366892692	0	1.31631951541588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122419004-2	6.00016080456059	-2.78594228115787	0.974299138576664	-2.85943215061013	0.00424400194333215	0.0574060341521388	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25360634926168	0.581381506691384
Merged-chr1-86600011-2	4.12898348420317	0	1.3342386056531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93235575-2	8.75100266415799	0.140755827740921	0.690245515061646	0.203921394155455	0.838414926232147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98936544518508	3.18726813820844
Merged-chr8-90861730-2	6.70011550304177	-0.755140252424768	0.55484590707009	-1.36099093965088	0.173516552717551	0.920419047150656	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37816742206926	2.22392366263603
Merged-chr5-148473193-3	6.16602934420347	0	1.31768221825192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128731146-3	4.86232162830192	0	1.30144419002072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169807934-2	3.49209492589869	0	1.39030968710851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89039082-2	6.03847251551627	-1.96887106368865	0.907376343445429	-2.16985055639932	0.0300181689905785	0.256716041206432	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66228729203641	1.15307255889252
Merged-chr18-75610731-4	12.3404631973346	0.698842916847686	0.626140001048746	1.1161128751991	0.264373821617766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64668396979594	4.11032358187291
Merged-chr6-31340143-2	3.2551659639104	0	1.32769994060377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108726292-2	3.87378400432804	0.105375202317432	1.32209022502027	0.0797034879490289	0.93647308529954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr14-86679064-3	8.08807502269288	1.67672427714702	0.642388560301075	2.61014031190277	0.00905050925409418	0.102765347996184	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25066348395204	3.91460186843461
Merged-chr3-58376940-3	4.39541048774833	0	1.35362137973532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99168614-1	2.19460742385102	-4.32486036107989	1.38872012884068	-3.11427786726929	0.00184395744289374	0.0304974039643974	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00812426709665	0
Merged-chr17-45708395-3	4.08406050656458	1.29607310369464	1.32773480161673	0.976153597929696	0.328988354001219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr9-114748568-3	4.28258416332714	0	1.33897242396772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71959708-1	2.42386384230907	0	1.32755408637142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34097540-2	8.1163399636074	0.251740237759245	0.513834407922213	0.489924835468307	0.624187088096493	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59717160476091	3.78846936301897
Merged-chr13-17028792-3	5.69112216835931	-3.04714554362469	0.992953611546393	-3.06876928407478	0.00214942516905251	0.0342492897090723	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26881136824547	0.803125334851723
Merged-chr11-31719588-3	8.51449549250864	-2.9347688866407	0.849958473806155	-3.45283796454039	0.000554722106706711	0.0119161310929838	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.872158472064	1.04220233489076
Merged-chr6-146907259-1	3.47605313611596	-1.77068052080719	1.18701374484827	-1.49171020848923	0.135775131751893	0.77298847878195	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28322822149285	0.382164212378408
Merged-chr3-60511509-4	7.85245353669987	2.71490834068945	1.11308171831639	2.43909166417352	0.0147242328081311	0.147617323884648	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.793480537552656
Merged-chr15-19856083-3	6.06543052248723	3.20340772964065	1.14011186419299	2.80973107135249	0.00495829118513355	0.0647361629937536	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.53908684775483
Merged-chr15-59391974-3	7.545315731958	0	1.30308410090413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21908173-3	4.96025679461386	0	1.30873462107231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115323466-2	3.75904252667816	0	1.32454393402828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45236006-2	4.27269107843767	0	1.31201888861024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44762092-4	5.53455906349386	0	1.30306466046786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20309669-4	7.30536149737099	0	1.30040606728896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28242191-1	2.22136626109541	0	1.36655219849727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67986700-1	2.97556015541815	0	1.38587470827352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-90593038-1	2.6320737394675	0	1.36576733151673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88242269-1	1.77446084225052	0	1.49477082812996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102516926-2	2.88273737072378	0	1.35430841024334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54737902-1	3.19782480973727	0	1.31735769206305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52906682-2	3.66634482612763	0	1.34683045874555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111556203-1	1.21793168272662	0	1.77440442925105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133153827-3	9.09017328646252	1.23552502865885	0.661024302228831	1.86910681572966	0.061607954967278	0.432141844707144	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67433821304635	4.10822011249922
Merged-chr17-51041069-1	1.50905096372562	0	1.49397530400301	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137661094-1	3.14096810706223	2.8756578060121	1.17617095603766	2.44493182836257	0.014487952414919	0.145996364076686	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.948462285078776	3.79408472100818
Merged-chr10-80666640-1	1.61217124759208	0	1.75705944077054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90084485-2	3.12717830182253	0	1.34659695665143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21200546-1	2.16386302299678	0	1.3607292555721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-44598738-1	2.00677423412419	0	1.53613804904571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34204161-1	5.85953379803806	0.161628309594471	0.782936578649504	0.206438572423408	0.836448343228336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0300789427912	2.40120643282281
Merged-chr2-73004013-1	2.41353719200293	0	1.42563582773633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77823040-2	2.73113997698985	0	1.35408679889052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4621206-1	1.60743366282642	0	1.53331230359343	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123815981-1	3.35265692186976	0	1.36125485296029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114076123-1	2.07654539508085	0	1.45547114355498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9500026-1	2.4269050533413	0	1.37611006027465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125476434-3	3.89813236560329	0	1.35025197270724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42939587-2	5.27570581311678	0	1.32160412745303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53634984-1	2.74007479930202	0	1.33473872039816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80176109-1	2.32907279487882	0	1.36504773415079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-84065326-2	2.44268802812172	1.26770600151995	1.45835801163383	0.869269405322298	0.384699792941444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr13-14036401-1	1.48840973024038	0	1.52563459182734	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101720745-2	3.76936406606735	0	1.342260251448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-68219284-1	3.01850312635787	3.64795520885925	1.17184872518292	3.11299157516242	0.00185201304433725	0.0305764639705058	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.786034639139
Merged-chr4-150459540-1	1.93889281810729	0	1.7067482267666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20810477-1	3.39394383597921	0	1.32039267325004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20220539-1	4.30566586894019	-2.59511096809829	1.13034289906222	-2.29586169847336	0.021683790331215	0.199615463953803	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59044884359741	0
Merged-chr2-167623169-1	2.45792970063259	0	1.35089536698735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101722854-1	2.78037263163359	0	1.42839826801637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113188038-1	3.98344629936791	1.95998302291114	0.824440764346972	2.37734851025182	0.017437604005509	0.168362540092198	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16202697745482	2.51075943690061
Merged-chr7-58396933-1	8.65990348765021	1.20370348337514	0.6418480885764	1.8753712985964	0.0607416608129718	0.427533882753604	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8935823254963	4.20222364918441
Merged-chr17-81016020-3	5.06417698377625	0	1.30287968214139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143231055-3	5.44906246741582	0	1.35397507711651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55970492-4	8.59848104169812	0.969649361095892	0.523517898882511	1.85217996016121	0.0639999854452228	0.44457776644026	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75800866203728	3.21875905320638
Merged-chr1-51805294-2	5.74521928859436	3.54211502526573	0.869972095571499	4.07152717115468	4.67059129335059e-05	0.00171971578395081	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	3.46712716631625
Merged-chr5-17839357-2	3.02388724550849	0	1.33283485626575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16751721-2	4.007402102871	0	1.32690220903746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21959085-3	4.3747200110319	0	1.3079962855781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47168361-3	6.65539219105315	3.99597112192514	1.03748779883587	3.85158372600514	0.000117356392003772	0.00359141840141815	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.15292080626044
Merged-chr13-41520964-4	6.17740112880803	0	1.30645964768146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148707550-3	4.35779855567445	0	1.32839693493587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135400480-4	5.0842071903329	0	1.31131735706221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33698305-3	8.76170690690339	0.59749394742169	0.778832946354428	0.767165732033356	0.442982984369561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43920788412704	1.90259970934752
Merged-chr8-116264634-2	2.86370983435136	0	1.34370799927278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52242690-2	3.42332089056753	2.48776434684108	1.20785524704976	2.0596543773913	0.0394315938108077	0.313238138726118	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr5-114747679-2	1.93694254834291	0	1.41938888290245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64341830-3	11.9344820440373	0.234645759424605	0.567401900482272	0.413544190150164	0.679207953128429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81289742644677	2.56075331917792
Merged-chr17-28515949-1	3.75678704715179	0	1.35636873054384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55229444-1	2.61566585718025	1.3097757492674	1.4011561156879	0.934782166385767	0.349900571989354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.469435083901436
Merged-chr5-107944976-3	4.57157450858221	-0.426756223274053	1.30554191741229	-0.326880521860167	0.743758253835418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0
Merged-chr15-101237075-3	3.87687067439824	0	1.32495407079181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34267889-1	6.42505379120725	2.28969226377253	1.32198844434803	1.73200626190174	0.0832724475286025	0.540476892749708	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74211167931253	4.2050568966159
Merged-chr8-95166086-4	9.33929433965114	0.708138101824287	0.531230066509319	1.33301585596881	0.182526600466801	0.953961707918388	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49623036344488	3.52433053254582
Merged-chr13-100795681-4	9.34312681146869	0	1.2854850204214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119806719-4	11.8524004643884	-0.522018744747873	0.545014999750829	-0.957806197969835	0.338160493257474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63038699758276	3.02889460529794
Merged-chr9-123856972-2	3.75826876691025	0	1.30933326082668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13415652-2	3.39556946117156	0	1.34839393295259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5824393-3	4.24421720224434	0	1.35247411186885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53448730-4	5.10485813823547	0	1.31863744621152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66279832-4	4.81109733204969	0	1.31151980843857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102809333-1	8.38879290971874	0.2750514005396	0.82764053928842	0.332331957513924	0.739638611269731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6187365563294	3.35127792357304
Merged-chr4-56059538-2	2.82423937840277	0	1.40571142132087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157399860-1	7.84409158997862	0.662291358789394	0.57800056100001	1.14583168854292	0.251864800705823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47075957335933	3.04598781603299
Merged-chr15-76534141-2	3.49207602418418	0	1.33646027603616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33736938-2	3.67251970735601	0	1.33480924886882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93176266-2	3.95737860806107	-0.785749535352633	0.826198718414891	-0.951041823037608	0.341583145437132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62335822611351	1.57928534738074
Merged-chr2-27760448-1	3.39931726620408	0	1.43311992975385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122102287-3	7.54242678908584	0.00292494778082697	0.54801164070943	0.00533738257282357	0.995741405069618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14180429788001	2.62606662475342
Merged-chr8-123021961-1	1.6689199641273	0	1.51464160203765	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68092623-2	1.91698450032503	0	1.50893167906378	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-93743354-2	4.27123576546253	-1.04813548872935	0.851857692448958	-1.23041148541621	0.218543054555581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67867166155677	1.88903407179563
Merged-chr17-84698909-1	2.17231394091898	0	1.34567576768949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107277058-2	3.7725076654608	0	1.32277066564974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133424269-4	15.7247820275613	0.836621132763579	0.39259753084761	2.13098928808169	0.0330900246769529	0.276063369672504	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05245524187639	4.90530131729962
Merged-chr5-74312064-4	10.6734629714362	0.617720506599821	0.496496559465637	1.24415868513702	0.213441165964444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65346033899102	4.36269442308226
Merged-chr10-52376635-3	3.8039880967975	0	1.31238691173603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106901771-2	6.38127090545225	1.18129411831845	0.692042493042101	1.70696760704055	0.0878280733927261	0.561928313189472	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31590567543113	4.5115652409689
Merged-chr3-127640035-5	9.77281243062815	0.247106655761817	0.48683712799158	0.507575617293697	0.611750993739932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92143267867209	3.33322067991586
Merged-chr7-67479391-4	7.13972180277668	1.17766757119607	0.728140757580372	1.61736252082562	0.105800050928433	0.647430532585744	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01502436350874	2.00523365194985
Merged-chr17-34336505-3	14.6848420008715	0.76192791434728	0.641567820270656	1.18760307215198	0.234989826917165	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77972235362304	3.20023722099316
Merged-chr7-81162566-2	3.85281339283234	0.275547849130074	1.00410064229992	0.274422540452643	0.78375992287879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04790655584953	1.15637648126681
Merged-chr8-120766788-2	3.33435625736403	0	1.37617473395375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3873644-2	6.96178670568749	0	1.29326149718377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34269423-2	4.89405990647799	0	1.3589243992131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61469049-3	3.98926681301876	0	1.32359124530753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70543263-1	5.60932708177922	4.38646917411406	0.976353722962348	4.49270491928387	7.0324195417137e-06	0.000382950406144019	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	3.10171321013009
Merged-chr1-34164801-1	3.17216774959382	0	1.36718900966122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23517707-3	4.87072387061101	0	1.3024135182746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49772666-3	3.65750741597977	0	1.3863302425268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54934494-1	3.00835537230136	0	1.35612429449518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61325989-2	6.38969614597586	-2.61614616906035	0.767053950950493	-3.41064167105659	0.000648102046005032	0.0134832461949204	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09621859032059	1.46928333126936
Merged-chr15-12380733-4	5.79591789279951	0	1.30023349184733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-94681007-2	2.99163989379122	0	1.43949543088785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5929161-2	4.40086000757636	0	1.31649308337885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149072811-1	2.39703122285099	0	1.40424444733014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99175358-3	9.53869085957973	-0.826347672151847	0.598519911965558	-1.38065193092423	0.16738600781305	0.895530216681805	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52340684810897	2.46922541264697
Merged-chr3-21951822-3	3.68651867414783	0	1.32642838047968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125368644-5	7.92021204203708	0	1.3058284193105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70702832-4	18.4413734071511	0.957517267389551	0.525495385839893	1.82212307318201	0.0684363134898673	0.467688699153824	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08907976315207	4.17424826605042
Merged-chr14-69088678-1	3.11159306559991	0	1.33504693573201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34025266-3	5.60255290130751	0	1.31227535035735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79511690-2	4.01367975737681	0	1.30461725348248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23840699-2	4.51547454368714	0	1.37491078572633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42074621-2	4.74659762111185	0	1.3078513368047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89317010-3	4.30660701970467	0	1.31770026645381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54078423-5	10.6095811565745	-0.125950282598102	0.546091862825482	-0.230639368890125	0.817594980097642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18155759822507	3.39633142321475
Merged-chr11-53748196-2	3.2368340778213	0	1.3689412749498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30727695-4	8.65470806660884	-1.68017824884571	0.676925714681663	-2.48207183211505	0.0130620940996762	0.135485016037689	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43273368950624	1.50690972966086
Merged-chr19-17350577-3	8.63583120857727	1.86737420266222	0.551979915299098	3.38304737347256	0.00071686265477282	0.0145886350167501	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85056974380493	4.77940983111544
Merged-chr2-51089922-4	4.45167604846228	0	1.32828619704653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94340386-4	4.279509518461	0	1.30736778649488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127480626-1	4.84500295724636	4.58785550658588	1.12343080880156	4.08379000348054	4.43070736513094e-05	0.00165919199703064	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.25293502696286
Merged-chr1-55552679-2	8.34635637121615	-0.117571566028132	0.605907374548347	-0.194042144008846	0.846142882842558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80593662056905	2.38097024974186
Merged-chr5-21355164-2	2.53073577745354	0	1.3615738677921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44072320-1	1.33741322469227	0	1.69691056107191	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28419069-1	1.96299184345338	0	1.37222979814069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-10438222-1	2.48630551151961	0	1.35201357066164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108596195-1	1.69179158014971	0	1.41376781053049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72297539-1	6.51915026390088	0.515943393027685	0.720470475750968	0.716120105393496	0.473917190222112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78511492024588	2.73330667186518
Merged-chr4-136879224-1	6.24852214648098	1.87745102299644	0.752493762621626	2.4949722060892	0.012596699654864	0.132017167460019	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12187254971657	4.36411933557284
Merged-chr7-125511610-1	3.4794478687065	1.35723892411074	1.40016733818198	0.969340511736993	0.332375322692322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.688405034366054
Merged-chr1-166342770-1	2.19168718117254	0	1.41071747126937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-71917871-1	2.31785802082253	0	1.37121210651708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101253059-1	1.88604702646763	0	1.43656626860171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3343814-1	6.25879395406121	-0.197526596947814	0.655015700581454	-0.301560095082409	0.762987432027987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68607378691883	2.31447273151311
Merged-chr10-117805330-1	1.87478690985084	0	1.40545276688311	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116141435-1	1.81392849002998	0	1.44831196644762	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67808997-1	1.71774127773415	0	1.49261727942248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80855489-1	1.82808394699012	0	1.39667986950334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145391790-1	2.04725667245104	0	1.49768127406666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144343487-2	2.19028926219702	0	1.4012835035314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60901067-1	1.2705215940805	0	1.75793599884753	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-9684232-3	3.66072589935016	0	1.34260059290276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139725201-1	6.80885544421747	1.5688847945183	0.709998514883678	2.20970151574941	0.0271258844939997	0.237006023284517	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73053575931996	2.81517765864336
Merged-chr3-136756298-4	6.06565104494908	0	1.32113778932072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99417190-1	1.54950961508333	0	1.47283574354961	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129153982-1	1.72837660275052	0	1.59209502868803	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25340199-1	2.88424963183991	-2.02386617904432	1.03559420456476	-1.95430427297043	0.0506652438309208	0.37443689474953	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43465557305325	0.733321818366247
Merged-chr12-77791473-1	2.8218705025083	0	1.41842625159705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112308854-3	4.53919252664876	0	1.3177141502771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129366349-2	7.64160502104929	1.16069133495033	0.795200320319205	1.45962131212977	0.144394178658774	0.805840122865848	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66460427944591	3.75374246883657
Merged-chr10-20818715-1	1.56529974434897	0	1.60503003251637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61707218-1	4.57607476600803	2.73067783569869	0.877709820438007	3.11113966383102	0.0018636677173347	0.0307533410749881	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.670820021473405	2.43491183200938
Merged-chr10-21603618-2	8.59381287777111	1.12667507340212	0.645386125836464	1.74573798273378	0.0808564917816535	0.529211569707925	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77461132258104	4.50264640475577
Merged-chr7-101027088-1	1.65117259901263	0	1.65260201563842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41322419-1	1.90411981555136	0	1.43934836018051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36915215-2	5.41717609011235	-0.71595094641899	0.769322441724559	-0.930625323777209	0.352047410314619	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22770103392425	2.17022068149009
Merged-chr18-35081650-1	0.555730735897554	-1.73873879234952	2.43459963166667	-0.714178532574252	0.475116789627928	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3540832179149	0
Merged-chr12-39200124-1	3.24081223613206	0.822860696221053	1.03266716789643	0.796830500476976	0.4255494786618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.791340754184682	1.66398411766936
Merged-chr4-156034942-1	4.54043603714174	0.474357717075524	0.916880752803065	0.517360317168104	0.604904655639324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23640945382637	1.41083941945204
Merged-chr15-51448516-3	5.9455970391545	3.00076975573404	1.01823673385598	2.94702563358755	0.00320846605339453	0.0466726519015895	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	2.45258850348856
Merged-chr2-68825179-3	6.58696282240721	0	1.3027789444292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166483856-1	2.45699265637865	0	1.49128091759694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111653703-3	4.05443607776484	0	1.34662709993799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37492548-1	2.44503603310211	0	1.39213886081215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20791960-1	2.57162771711326	0	1.37941730916039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-7277258-1	1.4010536157919	0	2.43093179929818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35210502-1	3.04853984589996	-1.34576901871373	0.775801838365387	-1.73468139950437	0.0827972526809166	0.538408724618089	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25737900888823	1.56112970471021
Merged-chr7-125564051-1	2.97174507926439	0.00751808084132573	1.24190904345422	0.00605364851874749	0.995169916811452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02632403472909	1.88772579123251
Merged-chr13-5867301-1	3.26673635343315	0	1.34668526605673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23815300-1	1.44174892038355	0	1.50632130491089	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72116905-1	2.83137830243397	0	1.39336811849751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95763109-4	4.60042549622137	0	1.30012271980665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56033070-4	4.83433115571144	0	1.29988381133268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73096698-2	3.99699425199842	0	1.39808201894219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137611376-2	2.44470636864239	0	1.34806698873336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153115900-5	10.616469529937	-0.26895633826145	0.454073208253386	-0.59231932951077	0.553636774575719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65396532318542	3.48762807179304
Merged-chr12-54448401-2	2.57307553773308	0	1.40744157757206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81027827-3	3.43452526451566	0	1.33696785445445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189873527-3	5.34706829327008	-1.32216673170836	0.801759563572304	-1.64908133532869	0.0991309728642559	0.616758312176299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31879162796044	1.52944205045577
Merged-chr15-51803444-4	5.53060982664849	0	1.29656105529662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39735881-5	6.41852257157535	0	1.30772846365928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9377585-4	10.2925357760721	-0.00212670781208714	0.549330342640044	-0.00387145520101133	0.996911033383599	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1395270528958	2.50217563705456
Merged-chrX-155249435-2	2.80302337196859	0.0482107981970875	1.05956463474769	0.0455005731751022	0.963708318045677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.866220529060937	0.989878296978726
Merged-chr15-59249043-2	2.97443701178053	0	1.3249306120666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51153041-1	3.18543276758431	-3.03882543823555	1.12461802562983	-2.70209561733966	0.00689039438650612	0.0831658129997467	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57320528657625	0.733321818366247
Merged-chr5-118614752-1	2.36906642779654	0	1.41702758893527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148597139-2	3.19825012142797	0	1.33449525868566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123125797-1	3.10729812477088	0	1.3283802857331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21326685-1	3.57166292791192	0	1.31562094497832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93697846-4	10.7221046923489	1.0636752259641	0.529567614403374	2.00857302643491	0.0445824342843038	0.341894584056111	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95710530724523	3.75720780768535
Merged-chr8-4213610-3	9.59422798481945	-3.2802002905611	1.07783191314828	-3.0433319430855	0.00233974087093345	0.0365684541860839	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89205944085251	0.382164212378408
Merged-chr11-72520079-3	3.20437375990784	0	1.35663731484415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126869109-1	2.93172800329919	-2.84713788682898	1.11728779811297	-2.54825828370956	0.0108262283273669	0.117908452713353	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13087984335392	0.420961122473315
Merged-chr10-82767337-3	7.85334952403601	0.948718210403939	0.659335851605142	1.43889977785115	0.150178920489292	0.829747011212393	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35646881933343	4.23781019361977
Merged-chr3-30515157-1	2.88424116136512	0	1.35045599216723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114966778-1	8.91714329133284	1.99754436513719	0.683117795270721	2.92415799876149	0.00345389385696655	0.0492360706756841	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52644119641036	4.61315567616502
Merged-chr11-48859243-2	3.17482814501711	0	1.33806456073897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-24142497-2	3.5085477389445	0	1.39871670070423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-109932334-2	7.06898944676936	-0.37507297087373	0.650229494066614	-0.576831679116827	0.564053167060871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05644163154692	2.10015108892538
Merged-chr9-115486283-2	11.2287133637856	2.1211461914394	0.650973222825895	3.25842310722312	0.00112033232662246	0.020715686535221	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94250148639145	4.07684717794855
Merged-chr5-123897991-2	5.94310854045515	0.407041904029572	0.737574366558541	0.551865577879007	0.581040453620926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14337594933834	3.06445407952407
Merged-chr2-84488105-2	7.50339767920834	-0.0041586746156202	0.912637987190604	-0.00455676256521159	0.996364242084175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.810661139835435	0.963545719069792
Merged-chr17-45630137-3	6.44803890866402	0.674538078175445	0.966578897255123	0.697861374887232	0.485263891845744	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.878893210046761	1.17595087342351
Merged-chr14-117716544-3	9.45108430870761	1.01283266539804	0.718330376813018	1.40998167151392	0.158545094957251	0.862477934109595	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70539534810129	2.54596323017769
Merged-chr15-99415946-2	3.48558464377187	0	1.35173416533143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125660176-1	2.1745279763181	0	1.37513749320237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84183015-1	1.73696462787294	0	1.40818363394404	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28573570-2	3.08028786778551	0	1.37343158112218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44395839-2	2.74280992822611	0	1.36070109877636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83686466-2	3.05236798351508	0	1.33738177299738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49001705-1	2.09217979388782	0	1.35679046155535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80435827-2	4.37266385320519	-1.82732864004237	1.01687977913272	-1.79699574870184	0.0723362946756754	0.487659910438119	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33782501682138	1.03338881410105
Merged-chr3-61401175-2	2.06218289419379	0	1.42956745586124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85142967-2	2.98758812615502	0	1.35169604305026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31949608-3	6.88694835346315	-3.04003093998618	0.985118507249637	-3.08595455025373	0.00202899833681845	0.0327536870844215	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20393992779586	0.727201944460961
Merged-chr19-9053213-2	3.007797217283	0	1.3497500445618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94158605-2	2.2976071902694	0	1.51003802027114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78600235-2	3.29526345807746	0	1.34389058890387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122898179-1	2.90172689478528	0	1.37005288621431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54604110-2	1.58066633853154	0	1.67763813664289	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94332032-2	3.22005379526465	0	1.34419696092158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20227719-3	4.12044181745583	0	1.32207979743916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84354223-3	4.53996290380727	0	1.31055658599213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83808203-2	3.3317725760452	0	1.31002891515899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85841073-4	5.60039408461483	0	1.30219851448638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76705930-2	3.12620243409392	0	1.35163897582998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102500201-2	4.07293690827669	0	1.31964152173789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20860773-2	4.77598763834773	0	1.33751499810348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46815708-3	8.41806789594847	0.90002336978373	0.909116947072058	0.989997351476491	0.322175413570539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31439787184409	1.53823966306787
Merged-chr19-32792817-1	2.53837331585344	0	1.36061262896535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75920060-1	4.21762107213517	-0.702695022605563	1.04685284068248	-0.671245274691572	0.502064290879904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55363828222544	1.74879361603124
Merged-chr17-47598176-1	2.1225661369692	0	1.45315222355113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117089406-1	2.79736575682197	0	1.33248093428277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104822620-3	4.40206049771677	0	1.33430671586203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-65744645-1	3.11927309499995	0	1.32692903431045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122061075-1	2.95385684989054	0	1.32818605008021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25796552-2	2.98528380416508	0	1.39497341071969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37502746-4	4.42518180651048	0	1.34069586911953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4570492-4	4.45587442834525	0	1.32545898954888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108485428-3	3.73219219352993	0	1.31148776088645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70806129-3	4.83467777252311	0	1.31855824996037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59326814-2	3.04808572770546	0	1.44848205122336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103233284-4	10.8691061961701	2.41617714036433	0.696757136770956	3.4677465258007	0.000524842088531592	0.0114017058235324	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01693474075419	3.058873647238
Merged-chr15-93287805-1	2.21553293823072	0	1.35614023043474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93777291-1	3.96446913132144	0.185875842739483	0.747491337932709	0.24866621632506	0.803618983559594	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20735630655276	2.81960882153758
Merged-chr1-120251387-1	1.68536232691518	0	1.39448849408209	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106901996-1	2.63139805898273	0	1.41141077699181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-107336813-1	1.72285135606704	0	1.42941735343901	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-10177912-1	2.69411236358449	0	1.37197207171416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32370411-1	2.08617598479323	0	1.36335093570528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9507954-1	1.7548721520398	0	1.5868454337967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129998394-1	3.74947255031613	0.624435985864953	1.18746071971522	0.525858224611176	0.598986716373168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28812527298501	2.20491078807447
Merged-chr15-77830885-2	3.44611742277428	0	1.35025925445522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111179164-1	4.81869981762234	-1.032469803221	0.743525152525909	-1.38861449369062	0.164950007672125	0.885979220889586	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88728454095753	1.8405601103675
Merged-chr18-11835175-3	9.06668988734715	0.457183255711467	0.588921023582039	0.776306563027259	0.437567998892994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86350303958772	2.85256114530448
Merged-chr6-120145292-1	4.09198747354329	-0.557954485537928	0.963368419324418	-0.579170413256026	0.562474192368151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55780984337627	0.666688015277142
Merged-chr19-40693964-1	5.2912747351186	0.343084439699748	0.895481032952412	0.383128650495918	0.701624377401335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54898121434193	2.36645504233657
Merged-chr10-17038088-1	2.40553726191818	0	1.39366152125565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104296093-2	2.98899866249386	-4.04413182025444	1.16230290697423	-3.47941297917111	0.000502513540920965	0.011008129347979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61176249928424	0
Merged-chr18-40459120-1	1.54973876358947	0	1.46641635682608	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135793890-1	2.85957560053399	0	1.34780091670189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34817238-1	3.67648009691278	2.35145043455109	1.13583598103795	2.07023766970499	0.0384300932853901	0.307111761749676	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.879261964366974	2.34751231442233
Merged-chr18-39368134-1	2.78571651936323	0.50290993725512	1.28732104496889	0.390663960028148	0.69604564171833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.851599296279844
Merged-chr10-99485814-1	1.95497453293266	0	1.36601526071831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128464902-1	1.1742684242659	0	1.60515782551714	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55415584-1	1.11775281685628	0	1.72743838223151	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57697300-1	2.98055598000597	0	1.37894322486578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63990082-1	3.42432674449965	0	1.33513642831657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71297894-1	3.9061374500896	-0.237611660362077	1.15783329574159	-0.205220959905016	0.837399494304394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26292784011254	0.82780788634396
Merged-chr15-84312686-1	5.76981596948596	1.9979612117624	0.849663913141517	2.35147236555594	0.0186992785451305	0.177915412901878	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10152674919239	2.27569420235585
Merged-chr12-17707359-1	5.65987259472273	0.360289552701096	0.879478807297323	0.409662574824608	0.682053487395977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56573748966158	1.65199033198162
Merged-chr14-90235166-1	4.30185305515301	1.73050448906013	1.47569102526682	1.17267399437307	0.240926563914996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09438939399008	2.82574572435485
Merged-chr11-19823707-1	3.90824356312364	2.38471214151722	0.982364498695185	2.42752272164221	0.015202334550886	0.151158209610803	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.30999519426894
Merged-chr8-66914315-1	2.25656725671953	0	1.36253158909625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32902717-3	3.71432776472004	0	1.34195942415455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119372256-1	3.21189878442252	0	1.36212994351265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30673178-1	1.39788895357171	0	1.45512841415835	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121985292-1	2.61703891071961	0	1.34653187240853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-81745676-1	1.03366074095977	0	1.48540248610198	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51334196-1	1.99948188079907	0	1.39192267869138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28777043-3	4.53627105444611	0	1.3265315359373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142779536-2	3.14095628096801	0	1.37737110176566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115160150-1	7.08688839154564	1.45784078806959	0.596125644273761	2.44552604316432	0.0144641001943276	0.145886226462683	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83081907034878	3.39381651296295
Merged-chr6-117881477-2	3.62150612302655	0	1.3207299642673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138848269-2	3.21243132229972	0	1.33856199323272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32194981-3	6.17386108879361	-1.37906715633411	1.0425980501557	-1.3227217872968	0.185927915345209	0.967328467846181	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60558979614188	0.469435083901436
Merged-chr10-26753337-2	3.19443466802002	0	1.37664508249475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52793726-4	13.1541031916387	0.422745721750848	0.498802195504772	0.847521774283779	0.396704355621204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66555340791604	4.17571759051381
Merged-chr9-41059189-4	18.3303999991531	-1.55674668810336	0.53235627678238	-2.92425722396383	0.00345279298164399	0.0492311172111081	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15505789217285	1.74448586799323
Merged-chr4-83567874-2	8.4679996701447	1.05392615505249	0.70352993502261	1.49805445736807	0.134119102305455	0.766177245164646	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59045413157041	2.05891966522476
Merged-chr13-3779307-1	3.77403861180259	-1.28919355507719	0.825001281063062	-1.56265642814031	0.118133428115974	0.702287754154515	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99218853759388	1.88508609669565
Merged-chr1-156465319-3	7.5397883556231	1.04159521734847	0.63612182478063	1.63741468500577	0.10154385188852	0.628360278930609	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37110126619719	4.54890790413456
Merged-chr11-117721960-2	3.86237602254654	0	1.31029331647488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37014461-2	3.24486869077812	0	1.39016681643416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28182118-3	5.59829196569723	0	1.33022024864267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68044225-1	3.32680169643973	-4.32192869892267	1.11867996392896	-3.86341834866108	0.000111811278119095	0.00346275818955942	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61469827830827	0
Merged-chr1-59341007-1	2.79318715552248	-4.58253201999507	1.24047624535892	-3.69417152254226	0.000220604860823169	0.0058935589678458	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28298630838544	0
Merged-chr8-125311404-1	7.83400701514986	-0.157972697082279	0.676871030021652	-0.233386701565918	0.815461138695825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21451294890086	2.87231699783625
Merged-chr10-44453995-1	2.07438350465963	0	1.37753806155486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116678312-1	2.29800656173365	0	1.4516052511983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148754580-1	2.07400824876091	-1.71158077412029	1.16181425925277	-1.47319656346886	0.14069804145819	0.792249393979051	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07850740261891	0.73596151290311
Merged-chr4-11031910-2	2.87711248400378	0	1.37521904080791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73395696-3	3.90372943872495	0	1.32753548944078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70587195-6	13.2109153742753	-1.06078691359368	0.711593032280737	-1.49072133294186	0.136034672819478	0.774128862671914	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93708270120377	1.47954504644696
Merged-chr13-44832314-2	1.89840417928787	0	1.42005136680317	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86444706-2	7.37574326530635	0.174581486511874	0.755920194514778	0.230952272182565	0.817351880929106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94352526694426	3.33322067991586
Merged-chr12-56241952-2	3.36935992439415	0	1.33849729786322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125349890-2	4.84434098108664	-2.12957459251623	1.13519842232621	-1.875949217893	0.0606622533612794	0.427112984392432	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11459295742963	0
Merged-chr6-37722042-1	2.52575380602521	0	1.41349560800547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-75622088-1	2.19398934511897	0	1.3884713208084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91108276-2	5.46047236877569	-1.12197329519266	0.843795852046293	-1.32967386894799	0.183625748079594	0.958250130491069	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49750245023463	1.2679693671925
Merged-chr6-122577068-1	1.31950807695292	0	1.51810951179864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80639926-2	2.81453064324116	0	1.47308081270799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34666242-1	1.46225893177166	0	1.60156342989472	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41647186-2	7.46452398036094	0.259265076189752	0.575570129946091	0.450449150677842	0.652386611454507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48171897373112	3.19355958357094
Merged-chr13-75871410-2	7.23921242883705	-1.95880455979983	0.716608246469279	-2.73343848532421	0.00626768298273784	0.0775557202810239	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43320004879664	1.24302299519605
Merged-chr3-38130297-1	2.79480941879793	0	1.34720163505634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95861518-1	2.70511892847363	0	1.34965477467162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131270438-1	2.19607245420018	0	1.45375339287502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-30872159-1	3.52779921277274	0	1.31698629672392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-19954555-2	2.89085821496973	0	1.34881039227664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90731655-2	6.61449713930935	0.962960275760255	0.75977323301626	1.26743116750422	0.205001161241827	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25453686935675	3.25040649316846
Merged-chr2-153562502-3	4.42875193440469	0	1.32778612481874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51738282-1	4.69584061511838	-0.872803060955312	0.852272791901477	-1.02408884719648	0.305793311703524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.94249050246329	2.63415770276585
Merged-chr15-96722472-3	4.23576272053573	0	1.32701188218797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60289430-3	3.10099457542135	0	1.39152938454822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86599510-1	2.07106581253328	0	1.41669358946599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27708118-4	5.54904542973822	1.95906934825432	1.27680021442439	1.53435856770866	0.124941464585525	0.73032274015087	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr6-108536660-3	11.5609281675802	0.267684786219995	0.459390347589531	0.582695713187194	0.56009815955461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97828505568714	3.57505325997083
Merged-chr1-74245111-2	4.20869508348057	0	1.32827635187151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92630359-2	5.97998413779201	-0.708288046550123	0.614549040550376	-1.15253299543971	0.249102119149848	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22390009250592	2.10209846903774
Merged-chr11-110972826-2	8.55318310783225	1.9707374102664	0.70431084326233	2.79810743951924	0.00514030110906669	0.0665803996576952	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42477749187768	2.98799385843465
Merged-chr1-149833144-3	4.4626688024562	0	1.30079360436509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31252541-2	4.19683504794197	0	1.32403461923794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54786130-5	10.4560430493583	0.811650316231846	0.491351410806035	1.65187338100928	0.0985603655384713	0.613734100102625	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43456957237968	3.87111517104428
Merged-chr5-129999692-1	6.44898094977918	-0.386883078675916	0.790395273289768	-0.4894805064631	0.624501552089163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40012452315661	1.3480509837169
Merged-chr11-75032013-2	3.81196965876372	0	1.31924210689406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81402601-2	3.90556291400043	0	1.34018136405929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80951924-2	7.73871827019731	-0.561397728231483	0.554797966153415	-1.01189579356937	0.311587880733999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59595009808015	2.2037485121767
Merged-chr3-105948522-2	9.25988741309983	0.923653104835489	0.56179467557658	1.64411153218483	0.100153166285121	0.621675319460229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53133134922302	3.77501073527537
Merged-chr14-25608313-2	3.94342694012687	0	1.36457480343776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129200119-2	4.55505662157195	0	1.3655635487879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67215317-3	3.57046602713411	0	1.32998288438604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70166916-6	16.4622278370511	0.379919529980112	0.380374235063265	0.998804584955452	0.317889364532003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04593073022118	4.50750187608427
Merged-chr13-102958721-1	1.9212223148273	0	1.51554327079802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86343629-1	1.83650442128748	0	1.40330091864743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54610142-2	3.01292482592278	0	1.41391521525553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148649706-1	1.82348331132527	0	1.48779900212821	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89638218-1	2.06168989312446	0	1.37687822157562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-42987150-2	5.65231668189463	-0.784711223596883	0.922979474607401	-0.850193579798368	0.395217470583579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43542835020749	1.00443616959195
Merged-chr8-110384927-1	0.934782012874088	0	1.57739255855071	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82812290-1	3.28516629408615	0.56951560257143	1.12023311513909	0.508390258130084	0.611179683368936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69399575752036	2.80193137221517
Merged-chr18-53529003-1	2.09810548581513	0	1.34978136110199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146078399-1	3.21475542514786	0.787411867427343	1.59083385134221	0.494968011123847	0.62062270113508	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30396406040213	2.26084277246375
Merged-chr5-101932161-1	1.65877722826594	0	1.45045469667116	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105720794-1	3.25749837804822	-1.38394016972253	0.934488171568081	-1.48096060691733	0.138617071099418	0.784316488705741	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84782605468791	1.15868211970568
Merged-chr4-52892702-1	3.69580969086085	-0.922710798931189	0.929691395849438	-0.992491490241371	0.320957828584713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83475045332053	2.04828035860944
Merged-chr1-177478755-1	2.5982530967097	0	1.38427363607501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110622047-1	2.53981867388383	0	1.37539730362355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125364131-1	4.48929551321635	1.92794195691152	1.05566505684892	1.82628187264839	0.0678078143147798	0.464510895713765	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.933762630890042	2.50745359125981
Merged-chr11-102209921-1	2.50680697820924	0	1.37959414373015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134143555-1	1.85675291924237	0	1.46436855896935	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151491111-1	1.13170417957006	0	1.72333517902329	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23194387-1	0.983570843784536	0	1.55902524251372	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74964753-1	2.30515102055673	0	1.37386650704715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134259090-1	3.92669432630907	0.210583257342871	0.94394530263851	0.223088410688893	0.823466698011437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53685722930694	2.43918820551122
Merged-chr11-59549572-1	3.50649105610895	0	1.34436867782509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104524658-1	2.83458310544646	0.889868662831988	0.9395364940319	0.947135814824213	0.343569576765228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14772670188719	2.03933265466087
Merged-chr14-63164947-2	3.63044904868497	0	1.36811531487511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129431512-1	2.95499341700108	1.84687657321807	1.38389548310671	1.33454917351996	0.18202394256331	0.952019893608294	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr5-45580575-1	2.4965200128419	0	1.42181366739907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117841096-1	1.55221674015144	0	1.46047189452091	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117885126-1	1.84708153839193	-0.318603005692983	1.13115154144775	-0.281662530632462	0.778202287888158	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02091985741777	1.51144536133504
Merged-chr6-24109331-2	2.11943323207663	0	1.53868343717053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30740910-3	3.79199585643634	0	1.38336423231779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70605321-1	2.87969889384597	0	1.3323817963982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81800983-1	2.41134120904735	-2.3804757402892	1.14041897241813	-2.08736946496222	0.0368547499529455	0.297772562734555	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94658690706201	0.306240821987646
Merged-chr8-61967218-1	2.27321045946858	0	1.44529739825916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134127827-1	1.98927036879547	-4.26552300280563	1.53290380412623	-2.78264232323242	0.00539182110369704	0.0690309447182968	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46827270450802	0
Merged-chr7-16190131-1	3.45414875126719	1.88797741515493	1.31383749952378	1.43699461755297	0.150719522940023	0.831693797165916	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr5-49439476-1	2.9199913979652	-0.135169871577245	2.15775976902111	-0.0626436146960726	0.950050298092629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.543422078079461	0.609949614787909
Merged-chr4-58739376-3	7.5480068647064	-1.11513139056025	0.693903091998606	-1.60704196799067	0.108045162087677	0.657589631514244	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89236646847562	2.09973317021014
Merged-chr2-3050234-3	4.28068008902923	0	1.34681194055963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134607486-3	4.11462089461217	0	1.30229047969404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47600130-2	3.39110145928308	0	1.36300607211344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115077540-2	3.35814280888058	0	1.36010802571489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3746288-2	3.33299534285385	0	1.32055459931174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71448769-3	3.50063917654664	0	1.33067476503804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128535365-2	3.41971640294612	0	1.32581410357575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145304255-3	9.16855914362626	1.87029182762995	0.622683732818133	3.00359834223613	0.00266807305070079	0.0406121364013728	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65472140813974	3.7437452164478
Merged-chr18-9731624-4	7.80778037002504	0.354448733236341	0.510128720713635	0.694822147516986	0.487166766756502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00522600554514	3.79065801562785
Merged-chr11-116095758-2	5.49600423907314	0	1.32668649524343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143219569-2	3.70521598907294	0	1.30830142778412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36286268-2	5.35131007562286	0	1.29870411821464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148878921-2	3.02293933236608	0	1.32687799069439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14619596-1	4.10632874390472	0.955689323304502	0.866949994982821	1.10235807005621	0.270306032803416	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83241559773483	2.61960051891651
Merged-chr7-47054795-2	3.19291805578754	0	1.38698891110478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80150797-4	4.90655843180898	0	1.31604424678082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152043671-1	2.34756691464718	0	1.48001692743627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83639232-2	4.60711526859204	0	1.31796021525688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86804822-2	7.03819360481148	-2.53891401632962	0.696285257509379	-3.64637049104176	0.000265970428285606	0.0067891029713872	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.35051949710539	1.46894927517136
Merged-chr6-67168506-2	4.52349329712496	0	1.32539751753399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83838394-2	4.39592472026084	1.63386693163065	1.07112492441593	1.52537476664691	0.12716564883539	0.739105798167518	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.608998403723376	1.29606516661881
Merged-chr11-61843678-1	2.69981113966498	0	1.35070214030659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59264928-2	2.70930511422869	0	1.33371779168692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86836125-1	3.19911733534504	0	1.34398179996468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79826073-2	2.06491091091169	0	1.40783388739461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9509120-2	2.60774565201581	0	1.44791927503503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19000607-2	3.0798046182476	-3.07978132761279	1.42960172761245	-2.15429323295255	0.0312171832312097	0.264443616207756	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72524791034082	0.306240821987646
Merged-chr5-100635833-4	3.99237045784308	0	1.32232646745348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135691653-2	2.71329086419555	0	1.37865931238712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36658000-4	13.6980736264659	-1.37616975896085	0.592054390847594	-2.32439752197549	0.0201041982604845	0.188024751614373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79255950416843	2.18395292683035
Merged-chr9-95783830-4	4.60989926155892	0	1.32690970548902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80174347-4	9.45913740145573	-0.393550746591628	0.655659131683969	-0.600236811437138	0.548348423919163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86051091446737	1.7465031213341
Merged-chr1-91523929-2	7.86676318998324	-1.02030775915295	0.597185779709849	-1.70852654872104	0.0875386845499554	0.560264728756257	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34154761030415	2.47498222380918
Merged-chr4-150862892-2	3.70434483153706	0	1.30965197101263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112998566-3	6.69264406954295	-0.338474732411439	0.775622037685135	-0.436391329753375	0.662552828488073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06181137190927	1.21171060354126
Merged-chr2-46662057-3	3.64858128583567	0	1.36811911880828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111746203-1	2.9699251897239	0	1.36551193953229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27285909-3	3.11218489676487	0	1.35483603165442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-62832651-3	4.44871174669112	0	1.3195312305666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97547245-2	8.71661142796512	-0.449581165213853	0.53406389601848	-0.841811567053199	0.399893436282706	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11859905065679	2.82628705061779
Merged-chr11-50018961-4	4.2289569938545	0	1.31420046210355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45612345-4	9.13282517899728	0.485514418990262	0.577510177149793	0.840702793129013	0.4005144554346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5641335405251	2.96697885690605
Merged-chr11-21179252-2	3.338420954392	-0.838443230559088	1.31683452174503	-0.636711155968186	0.524313005541138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0
Merged-chr17-45579054-2	3.22116393804666	0	1.35710972634896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105813479-3	3.23975336438424	0	1.32317487550196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124605549-3	3.96438776477796	0	1.30832257060031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136464397-3	8.8295181752388	0.547253794762964	0.52195789135437	1.04846349452243	0.294425112969675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10071158665758	3.79622340258653
Merged-chr6-145417155-2	7.91010444817894	-0.00528107009314939	0.614402861433114	-0.00859545165663964	0.993141906278183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74250970370803	3.85298836086041
Merged-chr11-119395464-1	4.30161999434251	-1.54609013098342	0.73803761946438	-2.09486629164713	0.0361828800960755	0.293736076521072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59895420160281	1.97634481356229
Merged-chr14-31391880-3	5.38289323611719	0	1.29701534903034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24809032-3	7.82920349880194	0.128717261153955	0.710549332029715	0.181151758719227	0.856248459003236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23104632831171	2.25838937565246
Merged-chr1-106174885-3	4.36579714444508	0	1.33375424734324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124257612-2	4.81798652049564	0	1.35473439115391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40189831-2	3.17342285215415	0	1.35758553811157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19222677-2	5.86152153215039	-0.745601314967373	0.875285963316515	-0.851837395109413	0.394304347974183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74668138961211	1.03956264035389
Merged-chr8-14523247-2	3.80692283004926	1.29098580672229	1.38890931147338	0.929496113286756	0.352632038553777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-180925375-4	10.7156249440925	1.30485166184301	0.492768681237537	2.64800039354371	0.00809694309543133	0.0939291396261416	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08287355208384	4.16489774762151
Merged-chr5-43921778-5	16.0580072663449	0.348333378233698	0.363379636893208	0.958593555797042	0.337763540227717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21887927552234	4.5347767149077
Merged-chr7-110669595-2	4.20022344647887	0	1.32536999942784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-81954569-3	5.15084696457246	0	1.31147636385257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132011653-3	3.6898030903723	0	1.34438025657438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26501046-1	5.34761117413021	0	1.40299792541362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36203558-3	4.51066162322837	0	1.31358350833464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35708629-1	6.03807691586019	0.0115354476370871	1.03165473454449	0.0111815002159422	0.991078639511731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.928670148753437	0.73596151290311
Merged-chr3-105796893-1	1.97533781353529	0	1.36809065390384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81049695-1	1.69021382121164	0	1.50955301272117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87954831-1	1.81281394554309	0	1.52260332795415	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22873550-2	3.60605579097625	0	1.39581330977705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32421234-2	3.60881798791265	0	1.34478303101596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4805842-1	1.2433067756067	0	1.90308390859033	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-132430200-1	0.998653271668561	0	1.81906158862614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40485463-1	1.9166327402752	0	1.40435230345804	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145802857-1	2.04437018331533	0	1.41604478215121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52292148-3	4.76831301348268	0	1.39640293116835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85473537-1	2.05287435893459	0	1.4038071595811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61703274-2	2.97731224735064	0	1.34051021609442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33207188-1	3.02286257949023	0	1.34832497366367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17906167-2	2.87881518769523	0	1.35040296648134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82767245-2	3.46272996241669	0	1.32440615148222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153802658-1	1.85075721961034	0	1.39169463934055	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55818013-1	2.82320611407367	0	1.347408883184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60710117-1	1.99798283172419	0	1.38034038023659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64396374-1	2.29024451347214	0	1.38068258822702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109294601-1	2.88432781533899	0	1.37077919018249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130485197-1	3.68166802858058	2.86877862633719	0.934177560485417	3.07091365462313	0.00213404854749127	0.0340760791815544	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3753580625788	3.73286936392936
Merged-chr4-104193686-1	1.41886780754252	-1.79627212983812	1.44229665082861	-1.24542487761179	0.212975613395917	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78184273776633	0.666688015277142
Merged-chr8-103919516-1	2.40095410841424	0	1.36794138953279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72162747-1	3.82864994059822	0	1.31331264038189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47064384-2	11.3622560684986	-0.0583519066398715	0.607178658850096	-0.096103355724625	0.923438486162973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21550733845653	4.02980949136655
Merged-chr8-47917230-1	1.63397156515394	0	1.52409744639681	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45378893-1	1.52701895811993	0	1.43088036762346	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24655338-1	1.85794862566467	0	1.46999917238194	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84744967-1	2.54252738165358	1.95218262474244	1.24451997249918	1.56862297743778	0.116735815210696	0.696005344959687	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.41959898789419
Merged-chr11-46775399-1	3.37368562956788	1.32640356850483	1.04046721690015	1.27481533964767	0.202374609940657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.679533914075134	1.34805514843284
Merged-chr12-24786032-2	4.88007970818321	-0.782616806485003	0.841257808489163	-0.930293660977157	0.352219059024441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45158685998695	1.84022605426951
Merged-chr8-40998871-2	5.2460220871969	-0.819540945538471	0.765091397900006	-1.07116737658784	0.284094177469707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42399437241698	1.775524153257
Merged-chr8-94953843-1	2.62965995404765	-1.798943762	1.04303299760881	-1.72472372985721	0.0845772724465998	0.546935818435973	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42217892100862	0.984484304269093
Merged-chr8-38096406-1	3.66474279554886	2.94084892049145	1.46434287389859	2.00830623272123	0.0446107599847464	0.341991403327457	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.958904680953568
Merged-chr8-126589299-1	2.8651583502327	0	1.33768777125771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101362623-1	10.7950785516028	2.32351701916043	0.533425953343129	4.35583796513518	1.32558812781368e-05	0.000634127978038894	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75935572082529	4.07802754406892
Merged-chr15-44625002-2	3.65508609622423	0	1.32982464940572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16525102-1	1.83231370030479	0	1.39968813046039	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146583678-1	3.9758291694234	0	1.33947445469421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48333256-1	1.67678595922274	0	1.46362602213456	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101776071-1	2.68547041048781	-4.6733067188428	1.19470270379266	-3.91169008323754	9.16524781169416e-05	0.00295030681528555	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49197824656127	0
Merged-chr3-136080187-2	3.35444554284209	0	1.35501352209571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25043629-3	5.50397951267437	0	1.3144827375353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39695522-5	10.4919985309068	-0.519136306637259	0.498909393517055	-1.04054225753822	0.298088042094675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07620332018761	3.71571771627948
Merged-chr6-120471462-1	4.16421687599835	-2.67490975382534	1.15073819586182	-2.32451635258534	0.0200978361659291	0.187992156040482	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35342016810828	0
Merged-chr1-136175354-3	4.26889458457834	0	1.3102256936654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60037207-3	4.92141731330209	0	1.29789879709656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72161144-1	2.0063074272637	0	1.36080407247643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54078752-1	3.07616196088564	-3.10860979395018	1.31477642991411	-2.3643637984545	0.0180610671084769	0.173128721031323	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30803285295011	0.609949614787909
Merged-chr11-40857674-2	3.14482966372988	0	1.35290937383954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72934324-2	8.32371684619637	-0.365845450986804	0.525237260783624	-0.696533696868694	0.486094662070662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52667674940529	3.20213796229157
Merged-chr8-34744374-3	9.00021959656206	-0.319924465816852	0.595913552311474	-0.536863886676021	0.591361637905645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08366197582296	2.52234002410264
Merged-chr3-136790368-2	3.5332960375674	0	1.35410921922387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106571000-2	4.44439726679395	1.4510116741408	0.767047676748569	1.89168381330803	0.0585331212765341	0.416520237714951	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35232236214693	3.81458991729633
Merged-chr4-42960147-2	10.8773107100861	1.41645891425441	0.685964531117746	2.06491567712161	0.0389309794805571	0.309939544972768	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19798100442448	3.51791840140237
Merged-chr9-56506568-2	3.93639997843676	0	1.31120120067469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121628054-1	6.99168031458421	-0.951525465611084	0.773559339799433	-1.23006137558599	0.218674122351888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09556822487584	1.86449426151314
Merged-chr6-38531411-3	5.81458662886614	0	1.29357985769905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74679309-2	3.24583801466144	0	1.32495230589892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16675201-2	2.81001690533506	0	1.36968918047289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40384009-2	2.47578030065362	0	1.38223618081504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28713384-1	2.5459973692388	1.78548868702393	1.38802535289942	1.28635163853042	0.198320368313838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.03956264035389
Merged-chr7-122308096-1	2.38043224280991	0	1.38744106478633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35105537-3	6.42852218667703	0	1.30859631179735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151422376-3	3.93196996093828	0	1.30500131738879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30287208-6	16.0918080735187	0.71170508443048	0.384925981664991	1.84894010363242	0.0644664620266817	0.446773298079917	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7507832361812	4.44947080783995
Merged-chr14-54448122-3	8.59029688891749	-0.346853799559671	0.650332074772881	-0.533348750606842	0.593792186836532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8693436198339	2.38143979781795
Merged-chr3-141862982-3	3.8676216319117	0	1.33376432580016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25130117-3	12.0983635215516	-0.236262562452624	0.542017940039124	-0.435894358839064	0.662913378202234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07210325225175	3.18069912612627
Merged-chr9-56209006-4	4.0439255759617	0	1.34625116041503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111994025-3	4.53019565630817	0	1.3125598241694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-23565745-2	2.53890938321271	0	1.34392594708539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22747314-2	6.83464731322532	0	1.29677179138014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43223729-2	8.05478125389358	-0.0375191340456517	0.60594403011118	-0.0619184812147875	0.950627749855315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29787727185808	2.83260079823897
Merged-chr11-48913803-3	4.11571437256716	0	1.34601177114527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52116044-1	3.12598197854352	0	1.32255416951559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-18892411-4	3.97494640034418	0	1.31208887448454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-81462864-1	1.98460667717795	0	1.43159577093047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123591421-3	3.31476036152854	0	1.34164384410717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102819699-7	26.1405667692106	-0.145487737210419	0.437138559738548	-0.332818356947131	0.739271400610638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.2051382338051	5.01515703735024
Merged-chr4-138464082-3	3.65673479858976	0	1.34189747351143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59333630-3	3.93193845612182	0	1.32027629335792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118663154-2	7.49689760403112	0.961241112862968	0.719447290924644	1.3360827471149	0.181522228510725	0.950302586038624	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32371959563924	1.68041597300842
Merged-chr14-118986857-4	7.57515675632945	-1.19971584601397	0.66802517649226	-1.79591411855699	0.0725081766709127	0.488566643920134	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39485952096929	1.62268962798352
Merged-chr15-78447847-2	3.30048592359574	0	1.34925670425559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151536069-2	4.38779667089208	0	1.31167560115266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36050469-2	3.08647445616636	0	1.3521110248326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100525395-2	3.10955086747987	2.50786684043088	1.27636509103343	1.96485069832202	0.049431520344875	0.367522144550711	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr8-85007911-3	5.02790501235599	-0.2197027668333	1.01218684352616	-0.21705752079124	0.828163518219984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02130086876397	1.0023426291647
Merged-chr5-30840002-3	5.10110749350781	0	1.31454253668404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26408446-1	4.54271379053702	-0.938889513258906	0.791199189875546	-1.18666642392113	0.235359223936361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69700009019071	1.79958479173889
Merged-chr9-40506646-3	8.91003782770326	-1.7965251817297	0.644428924150292	-2.78777862756315	0.00530707951633199	0.0682274093996651	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.64573011409507	3.02779196282874
Merged-chr10-5600317-3	6.00003992356649	4.28845916099064	1.00964759453556	4.247481184723	2.16187314358235e-05	0.000936802138199817	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.31480678761111
Merged-chr11-18877670-2	3.28996480888557	0	1.33331681133034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79863637-2	3.66959125176904	0	1.35045264714272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11611660-3	7.32794641645095	-1.35425001764846	0.676700684105076	-2.00125409868535	0.0453650136196838	0.345382987299529	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2108260443355	1.5122114716189
Merged-chr11-121176434-4	12.9991028502516	0.123676882825469	0.489451687501968	0.252684556992096	0.800511982441964	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11386548334088	4.18460610118915
Merged-chr5-77229181-3	4.36702615377494	0	1.32746636588588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5747218-2	4.66855033822413	0	1.31254155108254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44356549-4	5.11174508974479	0	1.30185181244379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117390467-4	5.31747079605495	0	1.30326660068484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-75245035-4	5.06486511635083	0	1.32895454253648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146833670-4	10.2737450309836	0.749758128769147	0.537029836969574	1.39612006103792	0.162678343697882	0.877745772213838	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51701555344164	3.24988086403977
Merged-chr3-144401450-1	2.4895464945391	0	1.35253190350956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126602093-2	2.43790685619607	0	1.41637714803772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62006759-2	4.17638508262624	-2.75977989117202	0.874999076238021	-3.15403749114506	0.00161028397576284	0.0273953701328296	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71475162339256	0.989878296978726
Merged-chr16-76130181-2	3.40405290750149	0	1.32702139409833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44121068-1	2.27913371667178	0	1.42874756163069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120887367-1	1.43230883049757	0	1.56304883404798	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34057084-2	6.01784116275513	2.85189570456102	1.16138547955157	2.45559786545822	0.0140650449800133	0.142694368772543	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.33962963608869
Merged-chr2-135488499-1	2.30427771806055	0	1.39315525447245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76220579-1	2.24423891508024	0	1.37501562666815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118821460-2	4.27996292957288	1.844613986738	1.2397593301686	1.48788070543268	0.136782356913581	0.776962786411236	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.581381506691384
Merged-chr12-84752830-1	3.75126016702259	0	1.34121360991939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84120154-1	1.87893149951433	0	1.39245363705051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51575781-1	3.94132597542881	0.754229062736286	1.38809065754577	0.54335720699238	0.586883883345498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.306240821987646
Merged-chr16-73650569-2	3.54813202792019	0	1.35037354208282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31196570-1	2.85383309861817	0	1.38108512121304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77355526-1	1.25438984967351	0	1.57639492423883	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-127776746-1	1.89515164800149	0	1.49927866031254	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120967631-1	2.22833232970714	1.76935243893717	1.18904909123636	1.48803985636743	0.136740382980823	0.776859421514945	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	1.34574950999398
Merged-chr7-67546477-1	4.99556492391379	0.734619110335377	0.855566782774204	0.858634445756941	0.390542227778369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01611574568131	2.46812004905329
Merged-chr3-144669172-2	4.5189058660103	-1.48647745579666	1.01030705670187	-1.47131255387766	0.141206609809132	0.794633751686836	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55302663389551	0.905469781553611
Merged-chr15-35664200-1	1.15205384325193	0	1.56558005373668	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166105672-1	1.99744657984806	0	1.41026732156747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16121296-2	2.68346195049368	0	1.38879606254055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118172579-1	2.01624800563342	0	1.40130091003552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25543752-1	1.63970531478373	0	1.62001715073449	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95206889-1	1.98921466454895	0	1.46727100130206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12225036-1	7.91817883234011	0.212271798582906	0.643144355866928	0.330053115830852	0.741359828076792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92030190723532	2.68288590984957
Merged-chr13-94476409-1	1.99683248376377	0	1.36994303812564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130851671-1	4.40773935187935	0.918615057493121	0.681931940556415	1.34707732965783	0.17795532865226	0.936339164960162	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74097906506012	3.55373189562152
Merged-chr5-104963440-2	4.95994731679678	-1.15335098494672	1.22482506405499	-0.941645479664136	0.346374176879627	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55550197064561	1.11779166918352
Merged-chr1-84251420-2	3.38970360476873	0	1.35686497032314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49193223-1	1.65108854334	0	1.5035733085443	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129314526-1	4.69716989355221	1.82047186010773	0.872187347778931	2.08724864530959	0.036865664298864	0.297772562734555	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29426787717726	3.03992838736715
Merged-chr2-101835096-1	6.43411290544156	-0.621946367638047	0.833456216232716	-0.74622560312681	0.455531144266806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3874645198534	1.75485430327507
Merged-chr2-28681830-1	1.70391368824986	0	1.43636611127241	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164670464-1	2.82774781180931	-1.47362625394329	1.10626755213962	-1.33207039390532	0.182837057915392	0.955049591250137	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62897233374201	0.61242769162773
Merged-chr13-75542763-1	7.59196800937606	1.21990457689145	0.798018879979306	1.52866631040494	0.126347188163139	0.735985323382822	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53647566013297	2.37073167707971
Merged-chr6-72022075-1	2.56955614392139	0	1.42289723497311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58980088-1	2.41094475911565	0	1.43150682589035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46938278-1	4.03789166693728	-0.626160636291067	0.822162714949307	-0.761601839764376	0.446297676463932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2550028708336	1.56343534314907
Merged-chr6-87513575-3	3.98051996663077	0	1.31842746256477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33372787-1	2.70828463758615	0	1.3647834496424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105656375-1	1.34453054408493	0	1.49076102135136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67089265-1	3.17398883290287	-1.91652226219905	0.939000860702262	-2.04102290254102	0.0412485507023093	0.323076566486049	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40742403498206	0.666688015277142
Merged-chr13-9430155-1	1.94871207167416	0	1.45378251776925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21145415-1	1.73976218111295	0	1.39821867314929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54563648-1	4.40643991723955	0.410604453661819	0.785170351796577	0.522949513723105	0.601009386881287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79359072995269	2.30923017122179
Merged-chr7-33876100-1	1.02519289481237	0	1.60015293812318	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148999064-1	3.97695219016279	-2.52736334792457	0.926460644405378	-2.72797702005646	0.00637240471396165	0.0784201804968998	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53078798347541	1.08186277552917
Merged-chr6-53375602-2	3.50261167996413	0	1.36018253422498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156446730-1	4.02599350124782	1.42583018767364	0.736952862191709	1.9347644345029	0.0530192093111979	0.386673353978743	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73184018946212	3.9498920872449
Merged-chr6-121109870-1	6.21029513533153	0.0439503376537549	0.585881262347511	0.0750157761961094	0.940202159671173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.872479608078	2.31651078275156
Merged-chr13-90051882-1	1.85839805888818	0	1.41663319040276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10766939-1	2.48574818213855	0	1.3922786322535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-161514576-1	1.47467582178443	0	1.46327791127391	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4993141-2	1.82633839353423	0	1.54231693940385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27315583-1	2.2744994303313	2.32680504784985	1.31596049226767	1.76814202365626	0.0770371635800728	0.511181373781493	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr6-125366326-4	10.8612216693188	-1.39740449094039	0.559590718698956	-2.49719025753204	0.0125181773029021	0.13138657469249	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42036059217259	2.88511004002347
Merged-chr16-87623875-3	7.94693708411706	1.84771362998308	0.679873875952004	2.71773000160625	0.00657314523761189	0.0803458190604165	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71697781054183	3.70810593662281
Merged-chr11-86894404-4	5.44355169752285	0	1.30182732079173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43248034-4	5.708330786697	0	1.35320234210212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59412912-4	4.42698051449863	0	1.31309659496211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79034672-3	11.1448875399077	0.959388522670666	0.640127645016025	1.4987456488411	0.133939629410498	0.765606982457871	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53375689235685	4.52418764160629
Merged-chr11-118490919-2	4.86376852147041	0	1.31442466204895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47396139-6	10.8663653253292	1.52277079181074	0.514886104369639	2.95749055740207	0.00310154248355211	0.0455270368243325	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73430473038816	3.81564172833144
Merged-chr6-115268084-2	3.21868007513069	0	1.34249981219086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155163396-2	3.80602773105748	0	1.31589777188821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101503992-2	5.77939583451296	2.81510370333938	0.947675197587393	2.97053643538009	0.00297280139119159	0.0441582550213479	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	2.55529857184098
Merged-chr1-151614730-2	2.93696524196369	0	1.34416472452133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84555701-2	4.47026494614928	1.14084733303399	1.06437922229434	1.07184291945762	0.28379059186526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	1.08764913775046
Merged-chr13-99126227-4	9.34921475717605	-0.405582655830825	0.541235695964495	-0.749364202795358	0.45363772071601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88624670515946	3.68653857923763
Merged-chr14-74989506-2	3.95458824986919	0	1.32256346617994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68898059-3	8.34765469415163	1.7452581877194	0.642554234659082	2.71612588258075	0.00660507985485395	0.0806305899860426	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82838528943139	4.75036176337397
Merged-chr3-138198346-4	10.3697706788565	-0.297536323763715	0.562032877753202	-0.529393093431036	0.596532788281555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59600074757272	3.54334878169928
Merged-chr8-88692131-5	12.5171874893847	-0.78508067541341	0.508372549697539	-1.54430186264089	0.122515221558887	0.720071147821353	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.25084776336439	3.19381362772217
Merged-chr11-6586832-3	7.28400636514555	0.768006445043031	0.625584550437009	1.22766210339838	0.219573838117533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25511338449409	2.63079492276566
Merged-chr2-102685833-5	12.7393668010299	0.0700009108496912	0.441637510124763	0.158503091890713	0.874060384485478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08890210529262	4.24432708825173
Merged-chr4-125059242-3	3.5427838234106	0	1.31841027905185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96413409-1	4.09251075669804	1.98157687265323	0.998660043188652	1.98423566274484	0.0472295746334595	0.355806292828919	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.75261347666835	2.46681435340383
Merged-chr7-46838297-3	4.58348536818218	0	1.3307881065002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25074525-1	2.82023795349033	0	1.35385815813022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116490733-3	4.39719091504133	0	1.33371568339726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22143319-2	6.89394987702682	0	1.29362450228837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135292935-3	6.77825792257383	0	1.30995586866971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5956872-2	3.21677636629503	0	1.33296905438855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127924681-2	6.18885606195931	-5.06125302419294	1.02628943945446	-4.93160392148568	8.15571588996794e-07	6.85898855271358e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92755294614307	0
Merged-chr17-50571224-4	4.99821690267884	0	1.30641908307377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80097718-4	7.10641670442434	0	1.30075589727255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-143058996-2	4.02680072310563	0	1.31460794825378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120280331-3	6.66776686938063	1.01286536024314	0.757425067274337	1.33724826917603	0.181141610704525	0.949071024783828	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15519945680882	2.11829389722409
Merged-chr1-161975244-1	4.54425152429125	-3.80750136319983	1.03876470455383	-3.66541272196502	0.00024694001848453	0.00642634107841104	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73171763714819	0
Merged-chr12-111309404-2	2.74800649240701	0	1.42437758554258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90186388-4	4.28447140365254	0	1.3118022130139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67870195-2	7.13309566633523	1.11253653382641	0.816331050294803	1.36284970836849	0.172929881325679	0.91804988423981	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8235108536521	3.08885994231555
Merged-chr19-40682794-1	2.25256376890607	0	1.40893999143951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137838931-1	4.89083856853504	0.22488756775695	1.11812571380716	0.201129054613385	0.840597663883993	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94319832870379	2.34682751451015
Merged-chr5-32053707-2	3.92618083981457	0.0390572520866758	1.21756994558833	0.0320780356218494	0.974409819429232	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	0.469435083901436
Merged-chr11-118015567-2	3.0920590421339	0	1.38173664008856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-104206362-2	3.60977202596229	-0.909544007178085	1.26733739796979	-0.717681028457874	0.472953983532457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0
Merged-chr1-184536996-2	4.32162062901646	0	1.31140939465288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-72299887-2	2.74727620850393	0	1.47489013900896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70716039-1	3.41228929424356	-2.89843368566284	1.24007757596477	-2.33730029623983	0.019423575158969	0.183259160025699	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44231619965621	0.733321818366247
Merged-chr15-30616535-2	5.412772257353	0	1.35560418285692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25006900-7	15.810274906225	-1.05978461032916	0.488326977086381	-2.17023564139832	0.0299889993275665	0.256567314749825	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87807875596372	3.53806776684042
Merged-chr5-114620438-4	4.90557959382736	1.90757230576937	1.28443970514401	1.48513962790919	0.137506840543927	0.779790159002296	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr4-9610275-3	8.7399836784308	0.767191811804008	0.635631310733169	1.20697611783644	0.227441341460685	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7926147050571	2.68333779073552
Merged-chr5-143039014-4	5.32919714741743	0	1.31906726426273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73593053-3	5.06813235747933	0	1.30204443065902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141431228-2	3.51607883664347	0	1.39875417181697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128839324-2	3.09253051783657	0	1.32270334287611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-11215743-2	2.50812981771486	0	1.36252800021527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17531062-3	6.39978935383758	-1.29710883507721	0.934973294618324	-1.3873218011074	0.165343658195275	0.887626489851067	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89245001639852	0.683637474991079
Merged-chr7-24385111-3	7.44243442933883	2.24626798274339	0.608569310741386	3.6910635207794	0.000223318354355456	0.00594799052912846	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81860242798539	3.00664719854652
Merged-chr7-80052369-1	4.99651038979168	0.787526173327743	0.809562827653516	0.972779562532971	0.330662872299068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79503789753687	2.03872093190566
Merged-chr5-90596350-2	4.36845316977068	-0.267054062577722	0.837840894897009	-0.318740782652474	0.749923086274894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90209042153155	2.42512484922428
Merged-chr8-106656278-2	2.33956864701351	0	1.49753563319627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43637426-2	5.64172551042142	0	1.29924032548582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84391002-2	3.51997251854183	-0.496490347793979	0.935295425114874	-0.530837994565193	0.595531048530168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96388148277107	2.31957511265084
Merged-chr16-3893011-2	3.62484270995968	0	1.32502714353568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67383819-4	8.68830731937395	-2.02996670188555	0.852951992867408	-2.37993078023221	0.0173158904000275	0.167509130137705	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81167412866227	0.683637474991079
Merged-chr19-5433201-6	18.1168088439279	1.26534245055643	0.418772125007854	3.02155366843651	0.00251481055589781	0.0387212089033219	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60513376788452	4.86447639012583
Merged-chr13-54080238-1	4.41620533613988	0.777953653662955	0.969514244543881	0.80241590883376	0.422312413547224	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90313952612728	1.4944959016211
Merged-chr18-61459534-3	3.48023005671703	0	1.32013787140395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38468355-3	4.05516772332903	0	1.31620149593604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77835950-2	4.31064729261757	0	1.3235070674799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33253318-4	4.44018275327915	0	1.31770511380918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4997770-2	2.6919467634318	0	1.34854869430335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126797852-3	4.69169464835657	0	1.38250026427001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-7535307-3	7.83548274960196	1.87131653613714	0.613808570841069	3.04869730569741	0.00229835931503236	0.0360943493871917	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80651553603977	3.90803660717736
Merged-chr7-102231478-1	3.11254303061169	-1.85740490453778	1.13589882235482	-1.6351851661288	0.10201023683686	0.630828138198304	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13404025919306	0.683637474991079
Merged-chr9-3004788-3	6.66703581145364	0	1.33799049849432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118532681-1	3.84370075922786	-0.0135122369901728	0.950329067201294	-0.0142184822673752	0.988655674760135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00958535062852	2.38047913892896
Merged-chr12-41378131-1	1.38621953697822	0	1.58382819600285	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8953922-1	1.74484539302958	0	1.41737531677058	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-7974986-1	4.61928082291189	-0.845643983943939	0.62916320874249	-1.34407729535573	0.17892339323328	0.940092309578028	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37563140948334	2.18923496216865
Merged-chr9-111289259-1	6.46715927985241	0.855236433661641	0.606475335971143	1.41017512656497	0.158487978442815	0.862255885382085	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28421626605452	2.63600110697839
Merged-chr14-54482699-3	8.81750561754169	1.21755441829746	0.473446356851109	2.57168399477274	0.0101205221541725	0.111957955084908	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8404772229957	4.14120598635862
Merged-chr11-77680274-1	2.1998989661839	0	1.34200710926828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62173400-2	3.32711092937989	0	1.36886117135079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69196562-1	1.78236795735388	0	1.38886860429705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46070340-1	1.66951641443211	0	1.50789872176027	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171101384-1	4.31338993836586	1.67094352583618	0.639468492504503	2.61301932061088	0.0089746228602228	0.102116612471551	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9961446456468	3.19386702538097
Merged-chr7-100700024-3	3.73771600054202	0	1.37033112250348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39688825-2	2.00219665333027	0	1.47327660239761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65569934-1	2.76166050881793	0	1.35190447089195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11781802-1	3.80359151380562	-3.26960997029746	1.11342316833837	-2.93653847276855	0.00331897648348964	0.0478767852737558	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88928367654443	0
Merged-chr17-43333595-1	3.90494431638135	-0.887184918956785	0.963874679668528	-0.920435962963447	0.357344982617608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41540560768725	2.19316068746724
Merged-chr15-52510353-1	2.07264613501734	0	1.41130941377013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-25499450-1	2.84090244299627	0.830577466410027	1.44935682254041	0.573066241171862	0.566599843808558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.576613669504516	1.26501898168246
Merged-chr12-57185685-1	4.68115944270602	-0.520231302301617	0.835954171419817	-0.622320361674893	0.533731234945813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69566875138133	2.58707500045288
Merged-chr6-134266287-2	5.85295516357784	0.226691380660684	0.822672611880192	0.275554792255194	0.782890036252011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78228084086262	3.11180945331266
Merged-chr3-127201315-1	2.66803197625016	-0.439810255479273	1.40026692844743	-0.314090297031381	0.753452458757983	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr7-47150850-1	1.90601427615908	0	1.3771244397918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52064567-2	2.51658070956183	0	1.40074257166396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34118619-2	2.58159864646494	0	1.34320462425093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-23587991-1	2.14907930897369	0	1.40042034375353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58932050-2	3.7163666825409	0	1.34151875678968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27200895-1	1.77024926317152	0	1.45031782004456	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125459914-1	3.36747277590865	2.90549546509865	1.30938479862569	2.21897754437672	0.0264882522808647	0.232679302802175	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.735627456805112
Merged-chr19-55644361-2	2.8092020922517	0	1.49030011068511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82908224-1	0.956322477904108	0	2.3021050848532	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74192791-1	2.02415304802793	0	1.42781151399238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75366636-1	1.66479199345454	0	1.45626652664017	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58723275-2	3.14723585147353	0	1.3627248210943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32167157-1	2.38654606096297	0	1.34991754076605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36642929-1	1.85346746116853	0	1.42979483905758	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105647065-1	2.37189940551784	0.998634919911371	1.5048126988264	0.663627387441777	0.506928824009695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	1.10669213789164
Merged-chr13-112751979-3	5.18497527480163	0	1.30359494983704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184015508-1	1.99475094848334	2.77544587329868	1.25414827896683	2.2130125439275	0.0268967808453023	0.235348418762343	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.576613669504516	2.93837187257181
Merged-chr2-6295337-2	4.82931356181505	0	1.30759408815289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117883062-1	2.13877487894833	0	1.49226542852099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-118403694-1	2.30154647609738	2.51404146857981	1.36408741397988	1.84302079383961	0.0653259745419317	0.451628346637438	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chrX-169216395-3	3.30680786480758	0	1.35295552027452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62137953-1	2.04213501966922	0	1.47450309948351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-73540385-2	5.59275179042606	-1.03244875695784	0.772946570357572	-1.33573107967892	0.181637186983359	0.950529640475259	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69770875367044	1.81579024618537
Merged-chr15-64079120-2	3.3032532446097	0	1.34325797683781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74521537-2	1.96190606677173	0	1.52766322850978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57363022-2	4.54325435337828	0	1.31348436187846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61413425-3	6.61601446146432	0	1.30264480909373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6568754-3	4.69202132131628	0	1.31310371686572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137757399-3	4.07462626794858	0	1.31330118852858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131237944-2	3.42462008324468	0	1.32467496026079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27817400-2	7.24856064727156	0.379120968438151	0.662524763028185	0.572236676415402	0.567161643269358	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20281367238402	3.03635178011663
Merged-chr18-35745415-4	4.89510581817758	0	1.32009847980578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20401018-4	4.22439679807246	0	1.31391963091277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46078086-1	2.37812092473026	0	1.39834586575679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55874351-3	8.13768999647343	-1.20480075057543	0.563821674903996	-2.13684717030536	0.0326104240905921	0.273270168328267	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99687471579125	2.25821626200969
Merged-chr13-44412381-2	11.2611802239741	-0.380275842792772	0.48971318848473	-0.776527673206884	0.437437487829158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.92063474178357	3.00294160613826
Merged-chr6-124981951-4	9.46534994445749	-1.31268177038139	0.558574655873374	-2.3500560875411	0.0187705824002084	0.178437951341871	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76584266874567	2.17813337661218
Merged-chr19-23520807-2	5.82533664121828	-2.35916191701623	1.14071129849953	-2.06814986414129	0.0386259330200926	0.308096603208543	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61759462850565	0
Merged-chr15-13391132-1	4.0064963789601	0	1.33112729577425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63611184-2	3.56941199843172	0	1.36536195079047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90924851-4	6.25068009814906	0	1.30507853641077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59004744-4	3.49136602475101	0	1.32766711865043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20446058-2	6.36808141562829	-0.211507431237915	0.824541348191392	-0.256515251420502	0.797553005385396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65375466129697	0.845523456341755
Merged-chr1-173737528-1	6.0854396692592	-2.13454288488259	1.01457388704212	-2.10388115852815	0.0353888149264279	0.289661440601345	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36266906761298	0.916190436775555
Merged-chr8-73677742-2	2.18250814182327	0	1.42157933663685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101132409-2	3.73398198455478	0	1.40388940478289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70603995-3	9.72420787502489	0.257488492096592	0.545781338494875	0.471779582656086	0.637084125813346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.27077557267126	4.33497262370379
Merged-chr4-9779779-1	2.8584199055443	-3.01041362130908	1.01201391616703	-2.97467611187693	0.00293298044194755	0.0437277070407265	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66958854867348	0.733321818366247
Merged-chr3-109438764-1	4.62093830740434	-0.00953287866286156	0.755186054295112	-0.0126232186209523	0.989928396233119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27169411935881	3.46588773797744
Merged-chr13-54301881-3	6.24747110069041	0	1.32896893958973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132333780-2	3.32083445232591	0	1.32796928734442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112665633-2	3.40509226065795	0	1.33077286643407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20539817-2	3.50742966646432	0	1.33379062883211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70568778-3	7.58172987272633	-4.63345221844728	0.926714001149872	-4.99987289789306	5.73681194237682e-07	5.19221209399662e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	5.05965265197925	0.581381506691384
Merged-chr10-34111440-1	1.73790507082579	0	1.40480292548977	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7968939-2	2.46013512477273	0	1.49426187293492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161963188-2	3.13466819570181	0	1.35889788045957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66788398-1	3.17027375114743	0	1.37189402684679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139007704-2	4.32913392176425	0	1.33012545400699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93292023-1	1.68264567226637	0	1.48383817479448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106351236-2	4.16137439837048	0	1.34010815018067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69103194-2	4.93064241873526	-0.211237057211594	0.734511098322847	-0.287588652770426	0.773661631872989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33435473735646	2.12463916324663
Merged-chr10-18139101-1	1.18155906206129	0	1.89119525709747	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-25715180-1	0.868499479301294	0.0758385707585966	1.67804972827002	0.045194471582664	0.963952300787572	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr10-89383658-2	2.51668452322575	0	1.36038771704539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-3890085-3	4.28167806723918	0	1.31795903183108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34184687-1	3.8898215259647	-0.278704542514488	0.897542964110095	-0.310519444370912	0.756165975296739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81251856727932	1.20539659680455
Merged-chr18-39612172-3	3.63826616263709	0	1.34841085260524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127154974-5	6.99575623007397	0	1.29179958408822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90412822-3	7.8862910790415	-3.12345111852956	0.769107473090398	-4.0611373934244	4.88342205038417e-05	0.00178474327351456	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05602814306876	1.0023426291647
Merged-chr3-103871954-4	8.324047258101	-0.325533176146766	0.649149532594998	-0.501476408440803	0.616035877007553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30332754227259	1.96144955975915
Merged-chr1-88252961-4	9.33889165835893	0	1.31668936256495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74646339-2	2.93020979874386	0	1.35715109146688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27213110-1	2.95263169762343	0	1.35614792792073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128039624-5	11.9993077393765	1.54973600705415	0.489287659457952	3.16733107221832	0.0015384506260558	0.0264556827921689	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7351772024114	4.18809046204171
Merged-chr3-65991189-1	4.66115961784726	0.152841671370537	0.858790670981732	0.177973138897533	0.858744070998174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59098947048291	1.60308582214967
Merged-chr1-160915558-1	3.84545869516394	-4.48408121784708	1.13783343406508	-3.94089423249502	8.11784164479243e-05	0.00269000243468867	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24905419455829	0
Merged-chr16-89774000-4	4.42267754478606	0	1.32297068242313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125795317-3	5.86937392507217	0.959534665020388	0.869745981623656	1.10323552542216	0.269924897532162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	1.41959898789419
Merged-chr6-17615975-3	5.76790927476364	2.7543553866087	1.03829081314055	2.65277834663443	0.00798322756514616	0.0928737739846967	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.54821291061891	1.58458601743443
Merged-chr3-37762451-1	2.36997074848048	0	1.41354326613098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115060255-3	3.92309215559819	0	1.31993255430333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36711002-2	3.89018407755474	0	1.32924348707131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92445587-4	4.45799975048363	0	1.30400016337288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70241644-2	3.10915636481288	0	1.41644959731733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22102587-2	3.24583297335692	0	1.36937513200019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-106802612-4	4.12770094802922	0	1.3196235655843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124712977-2	3.38677206353193	0	1.32607596411369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83583110-3	4.03001996876863	0	1.32065354609077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127104736-3	4.66643866041101	0	1.29811051329054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119373434-3	5.50951371476528	0	1.30773225070041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134689672-3	5.39074616661976	2.48303379811707	1.05743309689345	2.34817106199133	0.0188658546591884	0.179083111353766	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.65326585997348
Merged-chr13-100854405-4	4.88001339083683	0	1.30151244729951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99560803-2	3.10543475725675	0	1.34251980532935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84654259-4	6.44104595986301	0	1.30470157682036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87215363-4	10.6154347074727	0.932467236950076	0.49431529915526	1.88638150294676	0.0592435633295395	0.419795870468944	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4274467536712	4.3556112735648
Merged-chr13-59835327-3	8.59204150559839	0.867710300945978	0.498994649030104	1.73891704576902	0.0820493554466771	0.534669629444445	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73429301830304	3.68768008848678
Merged-chr16-84814704-5	10.4061693774923	1.30179326538063	0.584439445747137	2.22742197648286	0.0259190850153338	0.228663227948158	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73892572848215	2.78603968057466
Merged-chr1-136582775-2	3.61233002759884	0	1.30924915300405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95720002-4	10.8181395794998	-0.0139561058365438	0.501930344325741	-0.0278048657434558	0.97781778516234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35401858932408	3.31433370529175
Merged-chr13-91681693-2	4.23655743053939	0	1.33722163652991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116697589-1	2.68734008721982	0	1.33198688907026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130952691-1	1.71153527311824	0	1.445639291716	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14203973-1	1.64289823482818	0	1.4044195639181	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-35726795-1	3.74458943756993	2.57247906501254	1.61754982600643	1.59035537802488	0.111754722471468	0.674554230059168	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26988389850645	3.05120729760743
Merged-chr2-140795115-1	1.49162880835117	0	1.47714429120107	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135306711-1	3.78655137857278	0	1.36215506461548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84190262-1	2.60917297568541	0	1.4432881929513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43786443-1	8.11221966640225	0.278443641234376	0.636778133478969	0.437269476753432	0.661915928762558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77061375236458	2.90012233499004
Merged-chr11-23681221-1	1.41863253558526	0	1.53503960540707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-21999132-2	2.67178129433464	0	1.46106463718006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96622476-1	1.96772986519229	0	1.45943004911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173965574-1	2.91248627076839	-0.486385246752846	0.824229976107867	-0.590108660024265	0.555117803293381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37909088410386	2.30944904015933
Merged-chr6-146777176-1	1.92156075903657	1.88540379636919	1.676368560692	1.12469527321062	0.260718185388016	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr7-80215582-1	2.9199471801129	0	1.34382163881349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44113899-1	2.53215388604817	0	1.37028990792513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70129293-1	3.22384874178683	3.37376439998891	1.12520101259882	2.99836594725123	0.00271431536384429	0.0410958414656555	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr10-67210112-2	2.53870840444976	0	1.37694069371174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17777565-2	4.70078093790279	-1.67286784473284	0.856457086149954	-1.95324187491157	0.0507909413173999	0.375196117038979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99180595738824	1.26501898168246
Merged-chr5-106574415-1	4.9435337878328	-2.44677135986377	1.06662346415668	-2.29394105988311	0.0217938845068744	0.200442389442113	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9687179782942	0.609949614787909
Merged-chr1-177521307-1	3.09612649413313	0	1.34764997029421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26534592-1	6.74790832303015	2.15475975561696	0.567394313422977	3.79764073174742	0.000146079842359417	0.00427484701245789	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26112309759252	4.00685254775269
Merged-chr7-72669291-1	1.45061034589877	0	1.49905882548153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147073146-2	5.87078324395547	1.75901620081463	0.638861812798826	2.75335943638336	0.00589870945535523	0.0738292577385922	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91153591912098	3.73151481978811
Merged-chr12-25382732-1	3.27800981131828	-3.89365647901847	1.16956805519056	-3.32914058462727	0.000871144200260447	0.0170794446175275	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62174454133842	0
Merged-chr6-128411255-2	3.52543506599708	0	1.32185617399659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77381782-1	3.14641624670003	0	1.38370178749903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34424125-1	3.13656205107365	0	1.5097323339486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80351985-1	3.55465389638253	-1.18070298172531	0.980458479047261	-1.20423557647503	0.228498538959579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56455781609826	1.15307255889252
Merged-chr16-10656671-1	0.943533753692168	0	1.83048731804207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149950902-1	2.08357835786059	0	1.4193036514449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20472152-1	1.15446958812732	0	1.77733773441654	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16865574-1	5.87164176495856	3.14231006749319	0.877140181180207	3.58244911693038	0.000340387932785305	0.00824425124380599	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925679556471107	3.0818020120308
Merged-chr18-75901180-1	3.22423578499259	-0.925227642997274	1.33313521335642	-0.694023857240885	0.487667247571481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.899323202389902	0.382164212378408
Merged-chr2-16172223-1	1.70042222994478	0	1.5659941379663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156660528-1	6.09549907370719	2.12400581670634	0.818660072784565	2.59449054292072	0.00947312196851891	0.106344378655701	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.984600738149972	2.6847444908354
Merged-chr14-44086775-1	2.34866836151863	0	1.37191757404267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114822007-2	2.87635730058308	0	1.36741779184057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74921314-1	1.94715174219967	0	1.45087021229055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-138153216-1	1.92014608470404	0	1.49610063178168	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5733671-1	2.16668382831673	0	1.34779976651082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102220215-1	4.23435297805203	-0.367422729434105	0.822340130258807	-0.446801409677611	0.655018453386598	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75765638468427	2.48834673140933
Merged-chr4-129702253-5	12.5786568505683	0.426430801608587	0.545499758323622	0.781725005560139	0.434376202825429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96323185034439	4.36917825153706
Merged-chr8-25063258-2	4.96172303971917	-3.45932001810852	1.05964051522869	-3.26461660194441	0.00109612336325294	0.0203834027590001	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61164970935127	0.469435083901436
Merged-chr12-54879759-2	6.23809565354945	-0.397347283440726	0.771755243720995	-0.514861786393479	0.606649605839405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1415643252612	2.41037501137447
Merged-chr5-107868467-4	5.94796154260733	0	1.31470235828329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38028037-2	7.58168664334159	-1.56397131932775	0.612354220295684	-2.55403044102899	0.0106483946546423	0.116437415847098	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67227664226252	2.15292080626044
Merged-chr11-61749415-3	4.03067571852706	0	1.35089784313872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98278460-3	4.55741222504576	0	1.33360999632784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122801588-2	3.96481781708445	0	1.30710080399273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32638664-2	4.02823081658365	0	1.30994932679411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129058211-4	4.67024351587345	0	1.30930793801868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94607585-2	2.91592634463191	0	1.3901746692105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38505220-1	5.92567179130924	-2.77620625187858	1.09400024196281	-2.53766511687203	0.0111594711884838	0.120493523510023	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09353891708556	0.420961122473315
Merged-chr6-133985649-3	6.08345509362165	-3.62174629407814	1.01615056573149	-3.564182726672	0.000364991635937325	0.00864157371085522	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64673431237045	0.61242769162773
Merged-chr1-89466494-1	2.87331480609265	0	1.32850758190178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135144414-2	3.86645921887007	0	1.32879328699415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121260212-1	3.09872930609118	2.58870139626989	0.960545382360508	2.69503288840787	0.00703816837193791	0.08445764757586	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	2.22737944647028
Merged-chr13-37432955-1	2.78541540033081	0	1.35918614891823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70055364-2	4.41204467831521	0	1.33715893618084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81305031-4	5.50530598492119	0	1.3066261862646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99009012-2	4.2435845370717	0	1.31110635067326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155879219-2	3.99804809088634	-0.720318695743006	0.975641595474242	-0.738302568365663	0.460330606110275	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14156935452167	1.46928333126936
Merged-chr9-82980534-2	2.85801582465095	0	1.34754251291557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97270510-2	3.13599596227201	0	1.32999653442281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37855200-1	1.73568014162909	0	1.46706167506339	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23493417-2	4.18790571672013	-0.791501774667044	1.18477951825363	-0.668058286349955	0.50409638741837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.981953565221666	0.844015785373878
Merged-chr9-99385221-1	3.8873527295521	0	1.31186969325092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43514039-1	7.60437716254993	0.58365567565747	0.505480847973532	1.15465438106575	0.248231987726162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24761761387157	3.83987752656571
Merged-chr2-73492133-2	4.10754896382089	0	1.32355231348995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83145651-2	5.5469165432111	1.60609690789665	0.540795368280501	2.96987918554731	0.00297916888387395	0.0441989447476128	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46331704008908	3.72071179817798
Merged-chr17-40824774-1	2.79963491602457	0	1.33329691360131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27650354-2	4.16618634383402	0	1.31200039297023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46563162-3	3.80769330641422	2.3855160774956	1.29803746309109	1.83778677066441	0.0660938317909081	0.455443164843265	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.890396206374751
Merged-chr5-147051055-3	12.2880599143171	1.31649135858976	0.4637277139606	2.83893181053573	0.00452648287694216	0.0602295968390678	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04505429437174	4.43814987583919
Merged-chr7-90023667-7	14.2925634444428	0.263971853020911	0.416050241499442	0.634471096734756	0.525773423680887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70424097334862	4.00300165362213
Merged-chr16-44989257-2	5.65181697608382	0	1.3384527722815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136929205-6	15.0030787011016	1.07612541258285	0.459800668884788	2.34041724035094	0.0192622069707841	0.182010357702091	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13766648694941	4.08830518476356
Merged-chr2-170401621-2	3.25966311993324	0	1.35230379197781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120795672-4	5.79377442870518	0	1.3102576368736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161809125-1	3.36557445694095	2.19637841433128	0.966428629396598	2.27267523697287	0.0230457579891157	0.209378960579533	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	2.27471430455995
Merged-chr9-70290916-1	3.65229585618891	-2.64504247430451	0.990445450428059	-2.67055845747119	0.00757251845933966	0.089103610488786	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20716042112651	0.683637474991079
Merged-chr11-70589672-1	5.33569022292307	-2.58912516056401	0.879725440979076	-2.94310592823425	0.00324937214936505	0.0471119308791676	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54638601308659	1.31345086927531
Merged-chr14-64185577-2	3.72404926815246	0	1.32578127755945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26345233-4	10.8435058557909	0.815900789898885	0.521804754334782	1.56361317738285	0.117908438369666	0.701232343885845	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41807706485453	4.3318823645705
Merged-chr4-56685379-5	9.92783918100972	1.81346563121828	0.484811824191662	3.740555697547	0.000183613850408608	0.00511006416899527	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53002492405337	3.81863386094158
Merged-chr9-99195222-3	5.5855228521556	0	1.29970530606424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-39510138-4	4.74277162814472	0	1.31970847894753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69384638-3	7.78296690305267	-1.01396908367129	0.656225717636811	-1.54515291982579	0.122309279130439	0.719584240034	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67446921417132	2.311378010734
Merged-chr12-103493007-2	3.29528829234657	0	1.32296840179959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43873342-2	6.66931333605946	-1.6397781986177	0.801316662338564	-2.04635480040084	0.0407214756912	0.320369076633416	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27860719090578	1.41695929335733
Merged-chr6-97291556-6	10.5216305209009	0.892268158661112	0.505012055978453	1.76682546109193	0.0772574632844758	0.512066760907532	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29028535108214	3.89125881698478
Merged-chr5-3461059-2	3.75205745562801	0	1.3296058408947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103383018-3	4.81613055945952	0	1.32025143844267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124277598-1	5.21963138326062	-1.2064244442038	0.705752963111735	-1.70941463551857	0.0873741718202744	0.559430214130565	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99317632008684	2.43884655774859
Merged-chr17-28015171-1	2.19747117931558	0	1.34890287848882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97343058-1	2.4381580605287	0	1.3429772902594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123342491-3	3.66989766851346	0	1.33653351404563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32507592-2	5.78390010098903	0.635421696565526	0.629477647881572	1.00944282724567	0.312762307842895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18454763829076	2.56805956097596
Merged-chr10-8766740-1	4.39202671781342	-1.36942516822674	0.879532943700773	-1.55699133049488	0.119472543757881	0.708186941618513	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15503477553364	1.08186277552917
Merged-chr14-70977393-1	4.95861873352229	0.532801504423981	0.753795743973021	0.706824771410556	0.479675378592866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45524432028113	2.66658412415176
Merged-chr16-35921865-1	2.27009478018633	0	1.34911984009092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14535898-1	2.24078052480538	0	1.48809127023431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-29876463-1	3.49404695050081	2.06234665146836	1.21873656355834	1.69220052399752	0.0906077466685541	0.575615946313965	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.772096888724258	2.22258626807024
Merged-chr2-165453133-2	2.18134311939349	0	1.41958904260143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140815224-1	1.23564912804435	0	1.76434231377326	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37648656-1	1.87098414687023	0	1.40012214961334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73160812-1	1.94667596181348	0	1.36950064425152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103914486-1	2.56580325452491	0	1.36655447509247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30932062-2	2.76627803314469	0	1.35872193179932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106708478-1	2.71384438376347	0	1.36609390263444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115260763-1	2.0465466558371	2.44052290483447	1.51865746981809	1.607026570071	0.108048539674478	0.657589631514244	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07644043560683	2.68418793172922
Merged-chrX-120440355-1	2.58088379942708	5.4027703683415	1.41866067905638	3.80835984820215	0.000139891597467445	0.00412773984044829	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.49420006741644
Merged-chr17-87275890-1	4.63887823406589	-1.026164539833	0.794431567201837	-1.29169658180551	0.196462241690733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5701237494341	1.775524153257
Merged-chr17-63857285-1	1.23117157068411	0	1.57214787108048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-103762403-1	2.28611035916139	0	1.46384576033756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101998731-2	2.79479687032479	0	1.31743953363842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137740574-1	3.46888914865445	-1.57090329604828	1.0842488240777	-1.44884021191772	0.147382211064121	0.818461626939409	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71528232026187	0.61242769162773
Merged-chr1-55383379-1	2.4773648234294	0	1.36026704210928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76021805-1	4.89800346448397	0.476908743333033	0.87496498739138	0.545060374078383	0.585711994941664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42719297395337	3.29061620323927
Merged-chr10-121756860-1	3.31925120968253	-2.6934701231433	1.05981975566096	-2.54144170153113	0.0110396355077113	0.119773538417218	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21253846431671	0.581381506691384
Merged-chr5-34233079-2	2.87899042822369	0	1.34624645285736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161311535-1	3.84601042862216	-1.51168394745785	0.785725514173363	-1.92393389318437	0.0543628702034694	0.393704545751514	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51472366747671	1.96739710961373
Merged-chr10-40529875-1	2.1704266022287	0	1.35384234687667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55812742-1	5.73240538980052	-0.270510495286885	0.746423263418328	-0.362408982335374	0.717046428148346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97226150543801	2.60666171676197
Merged-chr1-181861277-1	2.05220538646209	0	1.45995585672997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62197613-3	6.03819718711065	0	1.32617337077378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44824572-1	4.27634778986642	-0.261770337776237	0.878238269963457	-0.298063004914519	0.765655076713762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16852085780337	1.58458601743443
Merged-chr6-97214139-1	2.41945419222908	0	1.42345183164569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40239200-1	1.79263669494264	0	1.50465396644874	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38066409-2	4.11205744054545	0	1.32344803853956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140847404-1	1.48392671084489	0	1.46738284028186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167696614-1	2.42277141482734	0	1.41594629299364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69505297-1	2.53776325006241	0	1.34839365837657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95710298-1	2.1700881103334	0	1.52903766650329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8370147-4	6.00669337958692	0	1.31834147972304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7185955-1	1.48829091142923	0	1.45267197455689	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95820735-1	1.8530114429132	0	1.39877584090266	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104129970-1	2.02487776834412	0	1.43597090904672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111748113-1	1.97339831668322	-1.03273199263729	1.38059241622831	-0.748035394442226	0.454438808685244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr2-37389781-1	1.44850197244036	0	1.46607711081349	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118569657-1	1.95348114999499	0	1.4630046860815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87690575-1	2.35436966616068	0	1.3513423787007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157798509-2	1.96336042589296	0	1.45009184035024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123565861-2	3.50799999190307	0	1.34610450536615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83205364-1	3.03399263371291	0	1.33254178621676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21143655-1	2.82020481540963	-1.24530950270814	1.28617385456602	-0.96822797189291	0.332930528027656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.659012160579651	0
Merged-chr18-6501493-4	10.1663511750004	-1.70534928425746	0.901389316422068	-1.89191202201796	0.0585027037316288	0.416394475334605	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20364055144884	0.581381506691384
Merged-chr19-5613176-2	5.29059791732655	1.63444056005298	0.809068930390463	2.02014995096177	0.0433678359043642	0.335176180367426	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	2.09093093088911
Merged-chr2-26498801-2	4.22386160896556	0	1.32411912255389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136116356-2	3.27980503413348	0	1.32581109594665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34290306-2	2.82675609861617	0	1.35877086295415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70971241-4	5.20695716815239	0	1.30564719662965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116151499-4	7.33840233211119	-1.02277361928866	0.596781710215045	-1.71381528921205	0.0865626545324616	0.556087615324246	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91368702392405	2.5105281013973
Merged-chr2-154712396-3	3.32197192980169	0	1.32387358446437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131492615-3	3.73635298953754	0	1.33044976818788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13132152-2	2.82569817914429	0	1.39515762520404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77921469-2	2.18364791407517	0	1.51013750496344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11548042-2	2.84523662449764	0	1.39026253151369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52594597-2	3.31751940771844	0	1.34794512343797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4106150-2	5.70935179823596	-0.256788035923533	0.756437799627051	-0.339470127021862	0.734255597590391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29468464650104	2.40172972476452
Merged-chr1-33739436-2	4.96778881823266	2.35581593597201	1.20944136624142	1.94785460604276	0.0514323627177929	0.378351815170201	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.15637648126681
Merged-chr9-35057099-1	5.99831935011713	-2.31801864304702	0.749473561707101	-3.09286245904017	0.00198235988174407	0.0321916721750617	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82456764614024	1.26501898168246
Merged-chr17-73393583-2	4.04405970008641	0	1.47272247452466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127764786-2	6.52014465647665	-2.05823272842499	0.756620858211884	-2.72029604535248	0.00652234936599744	0.0798893049054299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98560858458906	1.88086620139027
Merged-chr8-88691561-3	8.37896935882758	-1.54719047229181	0.593212032463037	-2.60815760238009	0.0091031031514087	0.103183239988196	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.31523329890082	1.89961628724531
Merged-chr14-47515769-4	11.3017749244935	0.0889855282746027	0.589958543039859	0.150833527752798	0.880107037504283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24028986023738	2.95139221855044
Merged-chr1-151353153-1	2.6377683436306	0	1.32117652190878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12513201-1	2.6336938475235	-1.96343918574334	1.11544784063289	-1.76022500938216	0.078369663175135	0.517705621698582	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51801256304684	0.683637474991079
Merged-chr17-48119853-1	3.61293259621458	0	1.31721530375968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53870864-2	7.21990260883335	-0.834141413693893	0.633544244702408	-1.31662692964042	0.187963707477616	0.974660881513435	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37720132053559	3.10287621859297
Merged-chr4-43498864-2	4.19547570925307	0	1.3043100654134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133005434-3	5.21178164327993	0	1.3071082612118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83570380-2	3.47231937347309	0	1.31937829464311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107572720-3	4.46846148527048	0	1.30255010835585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20157797-3	4.54216906831862	0	1.31671366358655	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61331447-6	11.2271831586124	-1.54765813181288	0.515794316837193	-3.00053350975829	0.00269507097706244	0.0408778507812515	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99892458481616	2.66722862650681
Merged-chr19-57482976-4	11.4965702051008	0.25820412215883	0.484644417487536	0.53277023904948	0.59419263765132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09484074014339	4.34159730236544
Merged-chr10-66853717-1	4.53643126100197	0	1.30616554530566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55433217-1	2.96616877872074	0	1.32905691688802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78740525-3	7.56023133189182	1.70668830224615	0.717498274205731	2.37866537607418	0.0173754409855755	0.167911204768326	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94444999633486	4.50380979740782
Merged-chr2-140718407-2	3.00492231494659	0	1.3544072441395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84169693-2	5.13430016376057	-1.19884067103884	0.65444288572635	-1.83184919140541	0.0669738920743859	0.460148875143815	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37539125261601	2.33904733505278
Merged-chr14-121372672-1	5.19431509680496	-1.10149630785367	0.780750985837091	-1.41081641629013	0.158298752673682	0.861441563308995	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5779018047754	2.17727924666045
Merged-chr1-171492060-1	3.2918918856985	-0.325741280443734	0.752717943921766	-0.432753441145001	0.665193900980196	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71915549095089	2.14242223062423
Merged-chr16-23235517-2	2.43575917118696	0	1.36152587844123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68364646-1	3.35402641038669	0	1.34270715230445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155177873-1	5.26025490265122	0.926822043166053	0.669001790565471	1.38538051203519	0.165936146734101	0.889667168074053	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5320874035891	3.9172860580229
Merged-chr7-30283972-1	6.15756879239012	3.69829923046762	0.953655608851756	3.87802388633832	0.000105308379825277	0.00329730780453406	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.848621293923477	3.947269414042
Merged-chr16-11317552-2	3.70820004968989	0	1.34019795266262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50889668-1	2.30530612098419	0	1.35893881998911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74699472-2	1.93585007607348	0	1.82354996192185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20125203-2	8.09725321478551	0.768082787352126	0.634294842364422	1.21092390486574	0.22592456996752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59471606941762	1.80018199085412
Merged-chr1-162229006-1	4.67294056935829	3.19485637925941	0.906094046273992	3.52596553569377	0.000421941874300838	0.0096710675966547	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08782272904134	3.13406065291507
Merged-chr17-47428937-2	3.99202148597708	0	1.32693848274307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138980980-3	5.63960102395625	-1.85301524542139	1.16137553025551	-1.59553494726527	0.110592661515361	0.669085090212274	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03510717223312	0
Merged-chr18-76202798-1	3.50626869998149	-0.877671906932675	1.33161407357449	-0.659103808190246	0.509829110410396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	0
Merged-chr4-117139441-3	5.03378422718883	0	1.31059941479597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91239315-4	3.4962099010001	0	1.31929755045882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74057463-2	2.82096283314615	0	1.32697995346955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58953926-3	3.9081926143009	0	1.32504573773752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6162841-1	1.78786280991437	0	1.39016880461678	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4161496-1	3.89343271524805	0	1.34441870909939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126778048-1	3.59459957225778	-0.953115992620671	0.954936284963275	-0.998093807543742	0.318233872619297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72091279987924	1.07938469868934
Merged-chr16-87579113-3	7.77864993474625	0.200416901433972	0.796342647521234	0.251671691900223	0.801294839421806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44352653481396	2.61584026570355
Merged-chr11-79703662-3	8.44837423280665	0.38481835346054	0.637183289180767	0.603936669392735	0.54588574809845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00531463803105	2.66613800347615
Merged-chr4-59464447-2	4.41281978283077	0	1.34547929460254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55976470-2	3.70042841438063	0	1.33890589480639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97432184-2	2.65390874678273	0	1.35466083775255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56259985-4	4.83003536981658	0	1.30621984935211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62697639-3	3.8037909068806	0	1.3301783599364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85111909-1	5.17251663935121	-4.65794029310747	1.12817040568055	-4.12875596599047	3.64731254683024e-05	0.00141530454682404	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98929927645707	0.306240821987646
Merged-chr12-84337483-2	2.66257583637717	0	1.34658534048968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108315344-2	3.88401493016337	0	1.31651453344822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121928542-5	10.9170641111025	3.00098776642905	0.63482191535856	4.72729074693969	2.27535350447315e-06	0.000154440192268969	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59708602080932	4.33629207244909
Merged-chr4-3875149-3	5.96471040269042	0	1.31142639170124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116176589-3	5.09731516478647	0	1.31807048241109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45333845-3	6.04505297852927	-2.79721205215482	0.956636865198618	-2.924006123864	0.00345557948437395	0.0492434846938298	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38572382230439	0.683637474991079
Merged-chr9-94361321-1	1.45154019110977	0	1.5975784294257	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66881907-2	3.74004621578712	0	1.39115122030069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173460369-1	2.55739307922248	0.806997460181423	0.97220151339325	0.830072211433596	0.40649795733202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35477443920863	3.1819016518161
Merged-chr11-95520114-1	4.07516722900584	0.804997834717816	0.973981166699672	0.826502464565661	0.408519120580917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28161642130248	2.03464639206371
Merged-chr10-67265036-1	1.28239794538455	0	1.49414104348878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131002756-1	1.7707347257941	0	1.69154517081022	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-19733113-2	3.22752435708989	0	1.33794423388848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130946306-1	2.29499600685448	0	1.38298259582957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73351236-1	2.61310777538931	0	1.34617006136492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59875394-1	5.40340531095501	-0.130254133346726	0.786274525683003	-0.165659866995665	0.868424631069586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5526745067896	2.03996640867281
Merged-chr17-84347637-1	1.56096884624475	0	1.46319763013763	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121992185-2	5.92479994781353	1.08962273179527	1.00757749487805	1.08142821503486	0.279506676494102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56965654905479	2.36466117824571
Merged-chr5-139558562-1	2.3649463812326	0	1.39456182814059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31413107-1	2.49179740460178	0	1.36750820496483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81774189-1	5.75598534654443	-0.672893926566467	0.83066983342177	-0.810061831419376	0.417904639779544	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33555773258475	1.43393032742955
Merged-chr4-12483182-2	2.96353443191373	0	1.41086649756154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121437748-1	3.102221778207	0	1.52560746564474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65608902-1	2.91331856328159	0	1.39395485799617	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83675062-1	2.25220631187799	-1.21008533660886	1.22086490769482	-0.991170545555027	0.321602310455727	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8336611515506	0.733321818366247
Merged-chr6-54282527-1	1.28284351681823	0	1.50426817607374	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62844975-2	3.27328090198549	0	1.32737717855471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117398456-1	3.58793718683065	-0.0896798655088454	1.27774568221909	-0.070186005522708	0.94404561283057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86150351373516	2.43227213747251
Merged-chr8-108981648-2	4.61182333845268	-1.26822364855199	0.974081781631363	-1.30196834851793	0.192927205776617	0.992628855800202	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78486125783143	0.581381506691384
Merged-chr8-84289099-2	3.15374704564311	-3.49702575049539	1.25356490524487	-2.78966468817367	0.00527626545849782	0.0679508952800549	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20054093573821	0.423054662900563
Merged-chr6-52060768-1	2.04072271929814	0	1.42073419414054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52431314-2	2.39130731808913	0	1.39574429880277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117661105-1	1.56142870111028	0	1.48529719246276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54944836-1	2.23441138173355	0	1.4269662274751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55647138-2	2.47480612546407	0	1.37376141735728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-72380310-1	2.67803078915033	0	1.34191422789627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43544215-1	1.50427188716812	0	1.43242391360164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105821594-1	1.71840427947021	-2.77135070662121	1.22405623446558	-2.26407139524203	0.0235697239795996	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81042853757735	0.688405034366054
Merged-chr4-7392649-1	1.96830186520668	0	1.50653855989937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88468737-1	1.73134444497206	0	1.63117898623252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92483444-1	5.0831337150991	0	1.33408158470083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120819556-1	1.62414524977864	0	1.43396003977418	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148601103-2	6.20666914880769	0.162509159575089	0.684867965379185	0.237285386074546	0.812435398624909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62606581940677	3.15293271650622
Merged-chr3-149323455-2	2.6572424535694	0	1.44654547011714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102649190-1	4.42770806914144	0.281817896463252	0.557185917790508	0.505787902143663	0.613005552214464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00621640595412	3.27620127671797
Merged-chr4-123083045-1	3.07442560305403	0	1.35999662116419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142744212-1	1.97835337304743	0	1.45530073535945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95803380-1	1.84747606732337	0	1.53729149821618	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88450714-1	2.19803234113819	0	1.53962838147018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-178058445-1	2.41230715024186	0	1.44098939170124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56615263-2	4.02999077368843	0	1.32015384441931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55364101-3	9.97397318789472	0.541713065559915	0.55558019458333	0.975040274727908	0.329540282579564	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02817264542617	3.62200326657944
Merged-chr4-6514969-4	4.58012299492221	0	1.3094648105195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60660014-3	4.72329048442753	0	1.31142149313301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88989664-2	7.06374153701903	-0.866740673842809	0.798773255896191	-1.08508975162214	0.277881905915094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68746444613322	1.67453645373796
Merged-chr4-34429703-2	4.17709612107489	0	1.31623416031264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35220242-2	4.90591150081215	0	1.30787414656142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111226682-2	3.31730447419575	0	1.32973725231777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63309175-4	4.45542746039206	0	1.31595844322973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4843664-4	8.85793336166733	0.249527990470451	0.560388486179731	0.445276797479421	0.656119733464344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27599444501954	2.81289813690589
Merged-chr3-50390543-1	3.87979591758465	-4.23216252570398	1.15639843760943	-3.65977883406079	0.000252433027531327	0.00652769632649866	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66964403908093	0.423054662900563
Merged-chr6-136653428-3	7.5495292642472	0.299104389488708	0.650258367438233	0.459977763403589	0.645532181579441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74442777237226	3.22855085816634
Merged-chr14-106194275-3	2.8954793164065	0	1.34705020009546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37602704-3	10.9883821285965	-0.897246275358346	0.52032228453893	-1.72440485833394	0.0846347811285453	0.547065892752498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51996260687029	2.59719856194818
Merged-chr7-24564862-2	3.50068161327287	0	1.32124102933037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124672374-2	2.8309003442362	0	1.36948514760304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94949961-1	3.01439716109147	0	1.32190912752506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33969131-1	7.78820320069423	1.44102769355344	0.589984424132584	2.44248430061876	0.0145865640291415	0.146626053123019	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1894038049595	3.80425001585269
Merged-chr15-8722647-2	2.8996881048203	0	1.36894476539187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45306943-2	2.93613776070769	0	1.31924668543013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75324590-3	9.83273101096615	0.982888223350247	0.500196595225628	1.96500382595945	0.0494137947278543	0.367473976361257	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28123734723457	3.48910686631238
Merged-chr4-141274802-3	5.6364301432249	0	1.30154733116712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100855436-3	4.2425977972171	0	1.35486865645565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59633257-2	3.86543625760539	0	1.31338844789536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99216917-2	4.22160286010664	0	1.32310809464523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31211463-3	9.26202826584923	-0.483874794108267	0.613109437405616	-0.789214395648178	0.429986709560997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95035665811879	2.82422868307434
Merged-chr15-64163372-6	10.4243381726226	0.0899678978343265	0.623311914119764	0.144338485750555	0.88523318924758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17619669489072	2.51142487429322
Merged-chr3-51797027-2	3.38981722431559	0	1.33332434577272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-53796854-1	4.43559514636459	1.70005959904548	1.65515804289054	1.02712825904922	0.30436007367168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.735627456805112
Merged-chr2-18892976-2	3.64547249117695	0	1.33362740183283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119978357-4	4.59846480630281	0	1.31317386766157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-33921136-1	4.33171530728288	-0.743620897758607	1.00528374908841	-0.739712442813205	0.459474496430753	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61364264631233	0.73596151290311
Merged-chr18-56716429-1	2.38778612550912	0	1.39210186597337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103247746-2	3.80602170610271	0	1.40732805370504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87724463-1	2.46880654303835	3.36881114302751	1.30954218145997	2.57251060005697	0.0100963864113044	0.111804518968497	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.905469781553611
Merged-chr11-118244057-2	3.67094189717431	0	1.33825993545323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69471892-2	3.59437049566108	-0.893286830584034	0.840644459371371	-1.06262144551815	0.287953657616121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71039362417866	1.775524153257
Merged-chr1-105932636-2	3.94999128191952	0	1.34591486518576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146909826-1	3.50105255397559	-2.78657674965913	1.13948439396075	-2.44547162245305	0.0144662832403959	0.145886226462683	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15922490559569	0.306240821987646
Merged-chr11-98075550-2	3.44291922418252	0	1.36175341506243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40806574-2	3.40457665749826	0	1.32663115957582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97298002-2	4.6606648388502	0	1.32554001675219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55519787-1	2.04218175653838	0	1.33430840432015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26570328-2	9.59617690223773	1.06884740398206	0.654099338567926	1.63407504175463	0.102243094710178	0.631969094488392	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92562511005282	3.2886417368088
Merged-chr10-118476625-1	3.35131853244961	-2.29288981705961	1.11178634401246	-2.06234752693987	0.0391746612117456	0.311689688486878	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39821587961386	1.57597341069752
Merged-chr15-30611501-8	21.1264096618693	1.1293739818705	0.408834014665903	2.76242666059335	0.00573734496867831	0.0722514057281274	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40065767360891	4.74736480881053
Merged-chr11-8621848-3	3.83898160934003	0	1.31222711433248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118609321-3	7.44107687496875	0.442919987536342	0.53186977049535	0.832760220840967	0.404979973520456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77951295621969	3.5057140949869
Merged-chr8-3337143-5	11.0556859201222	0.417698311172895	0.450202311916148	0.927801346454865	0.35351062547648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75198820206967	4.21660792566273
Merged-chr10-78028285-3	3.51964663438251	0	1.32544722588853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21380862-3	4.12486112090852	0	1.32818270420791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89146510-1	2.57405021770006	0	1.32830832479784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119602066-1	3.6589563504207	0	1.38709051001196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104714426-3	3.7517026269709	0	1.32298351156326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63790403-4	9.94323514729348	2.17863518148441	0.637513130451852	3.41739656395823	0.000632231133467896	0.0132035077173516	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84735812893248	3.58981628343739
Merged-chr8-83858149-3	7.4261015697069	1.30224652475915	0.860818104310984	1.51280104151793	0.130330204199508	0.751350465251086	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	1.7913447488181
Merged-chr17-81501164-2	3.45604362325504	0	1.34092462728998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62360821-4	8.87228342209769	-0.262699201056587	0.54327385786643	-0.483548393232598	0.628706407405835	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56155981633168	3.42497807257935
Merged-chr3-137823510-2	3.09626515475823	0	1.3284552559235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46467248-4	5.10351622173243	0	1.30676585659513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25084793-2	3.45791533377872	0	1.33083056097312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152838216-3	4.11913997357883	0	1.35974065950925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-23384499-3	5.16710116167059	0	1.3389026133083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59426960-3	4.032025474381	0	1.31071770509358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40473883-3	2.9778677484557	0	1.41105329824496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65656954-1	3.13203046006464	0	1.35414080299887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28429554-1	3.21623026188354	1.83207560175061	1.27402383539382	1.43802301876423	0.150427523014733	0.830503288181881	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.635744023561357	2.388633508238
Merged-chr6-22343375-2	3.01638657826051	0	1.33174721539019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31649842-1	2.05270854301575	0	1.43472210788895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73537473-1	5.47304084962046	0	1.31233886022943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97519360-1	1.24388963972414	0	1.58520946087256	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113875021-2	3.08503834990702	3.13529308203453	1.14500980989141	2.73822377323725	0.00617720284784737	0.0765804396310822	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46402698790757
Merged-chr2-72132341-1	1.32112301864931	-0.804929027703502	1.30566693894721	-0.616488787218994	0.537571970064936	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71744626096877	1.38450684154311
Merged-chr7-114090421-1	2.25460884791491	0	1.36565946990989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64279419-1	2.22079788796905	0	1.35335445844682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-37320266-1	2.18235251510156	-3.39998855110622	1.22798471253954	-2.76875478691821	0.00562709687899185	0.0712474854978883	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09671830727395	0
Merged-chr15-76782890-1	1.39593968095067	0.0971225675020162	1.61953980609505	0.0599692376417675	0.952180135384161	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr2-112392917-1	2.07551494985867	0	1.38045325266898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52815860-1	1.45847679628599	0	1.74948810513794	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23048309-1	2.91523847945211	0	1.32433169485332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82081060-1	3.4231708996815	0	1.36216117105081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60861948-1	1.44120514674592	0	1.54528735854315	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3350209-1	2.67679571380687	0.233913039800196	1.02452320904181	0.228314046705651	0.81940210522951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75623817686948	1.47954504644696
Merged-chr9-104257860-1	1.20167134767311	0	1.91528686209551	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24687536-2	3.31237719073946	0	1.33268206813154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33142589-1	4.95338083261469	1.09582041171254	1.01558730909607	1.07900167902638	0.280586979164057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84380970944162	2.5040884607806
Merged-chr1-105735450-1	4.72637277656102	-1.6117885829312	0.85318756271893	-1.88913745741296	0.0588734124735385	0.418258535713834	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54430914528694	1.20539659680455
Merged-chr11-77028780-1	3.05250749582513	0	1.3611868888151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73572613-3	4.06300013042811	0	1.32078739586451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96684400-1	3.87585521843541	0	1.34254425791193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68063440-1	2.03668099790986	0	1.42965330630415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108295346-3	4.35017427137304	0	1.33046907053238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90266184-4	6.38550675735488	0	1.30367113467087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60431693-1	2.12132173062666	0	1.54648993216028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106171341-1	3.49083204898445	0	1.32738271194975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105046047-2	3.13039469180576	0	1.33461992029461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56269919-1	2.6714434702543	0	1.37126791334995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19447825-2	6.13416438285742	-1.14125632661663	0.760899345036752	-1.49987818239153	0.133645960468302	0.7645302401087	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06331874051536	1.26514550294121
Merged-chr5-88727931-2	2.79857692017734	0	1.35700431330965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113605477-1	4.25573659300272	0	1.38555347466733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86216673-1	1.41638641640585	0	1.48837204469773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29147312-1	2.91050609057259	0.827074894444819	1.3254379501699	0.62400121736276	0.532626785587704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.469435083901436
Merged-chr10-23835311-1	2.55471316518638	-2.11497401070722	1.21995507841107	-1.73364908932702	0.0829803648021096	0.539374781987916	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29871227921438	0.793480537552656
Merged-chr15-58273144-2	3.67321328238029	0	1.32116756478494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6067590-1	3.0138380651463	0	1.34780968286044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21556575-1	2.93851440559154	0	1.35388961048433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98955800-2	3.08820254771383	1.2818027966224	1.40671200508922	0.911204846468275	0.362187450930897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr14-47163380-1	2.9864917340875	-0.293510722909306	0.988048768144352	-0.297060967406038	0.766419963442594	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82252158143529	1.6924856131816
Merged-chr8-31097183-5	11.5214844644353	1.30079832108338	0.449640803172622	2.89297215000301	0.00381615133199944	0.0531592890515531	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84856734567907	4.01914329131449
Merged-chr13-37893770-3	3.22661157073928	0	1.33886691852766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48681138-2	3.80036187740367	0	1.32849313951383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71286934-2	6.73681063761174	-1.02745828017286	0.899180697209825	-1.14266051680278	0.253179568882935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96005211650031	1.03295826569721
Merged-chr4-101682735-2	5.53948183757292	-0.821100294105403	0.829878745964755	-0.989422006646108	0.322456711847082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96317021355232	1.34574950999398
Merged-chr11-120064130-2	3.89670323965684	0	1.32774304520145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115469565-2	9.46771429365594	0.975993387226568	0.665115811076153	1.46740367763535	0.142266274655743	0.798259658565531	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53193525089964	3.65443278894413
Merged-chr7-101548345-2	8.75466492588121	2.45288823672005	0.903321101379773	2.71541120092667	0.00661935252601784	0.0807746424211319	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993642064779401	2.60033597541029
Merged-chr10-18049721-4	10.082169336303	-0.976898307844827	0.479085918986602	-2.03908791540197	0.0414412540723387	0.32408092252406	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.4864631603589	3.41755044293178
Merged-chr4-82622652-2	4.59055285337265	0	1.30794058615403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60631524-2	6.3131833643994	-1.23774999021629	0.839249181956527	-1.4748301420214	0.140258215361457	0.790522109799014	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24574154445753	0.735627456805112
Merged-chrX-159963441-3	4.59250361617092	0	1.31923938968632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30442691-2	4.65678723105144	0	1.30435086677289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41738131-4	4.2286819927363	0	1.30695056426451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43465176-3	4.97525656322554	0	1.30812482487825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70967853-1	2.51973701865377	0	1.40828353301233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4414647-1	5.13303867012334	-0.156530627706242	0.821022078598542	-0.190653371920807	0.84879717230496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8006474198408	1.40000983364339
Merged-chr1-152556209-2	3.69713445726824	0	1.32817403661549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33996329-4	4.91779692542298	0	1.30385722585119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16584828-4	3.9230256108505	0	1.32496336440014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66250251-3	5.09864947054542	0	1.31033191115947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110611551-2	3.78226275476984	0	1.3427315125977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106032099-2	2.5772006539935	0	2.06934826637426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103887832-2	9.41531058490818	0.688160646171653	0.483974125919174	1.42189552977586	0.155056581115197	0.84931494966921	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49446195341263	4.03585270657918
Merged-chrX-42033306-1	3.18197945075957	0	1.31130087364393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167953136-2	2.45189348982174	0	1.51846848090546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50984008-3	3.76043725140989	0	1.33870462941361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3661044-3	3.79948832940497	0	1.31383630593209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-56270622-2	2.43576353954658	0	1.39931846088408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62405018-1	2.00255226679834	0	1.42605754664678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30619902-2	2.1794482215386	0	1.47330271039549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49258032-3	7.55036772026786	0.402597092678603	0.738867137854477	0.544884285756252	0.585833104663376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97300001192854	1.96353301543917
Merged-chr19-43606624-2	8.89641960270396	0.906818697146985	0.527586929206166	1.71880432768005	0.0856500072623152	0.55168904628519	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74648842924217	4.05471975307275
Merged-chr6-47176187-3	6.74270273259343	0.354612209065538	0.72600836337659	0.488440942217626	0.625237547753389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04572913346944	1.97957216467336
Merged-chr8-106106395-4	5.18543512129381	0	1.31076708267377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51914074-2	3.85931061842459	0	1.31812153029827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155093564-2	6.39171894420512	-2.14489412998461	0.723145422839123	-2.96606195965894	0.00301639713675243	0.044521557030198	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50497532606701	1.34574950999398
Merged-chr3-89354981-3	4.42556846230748	0	1.33052081314987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132617347-3	9.04725192571291	1.09603522039261	0.642731666385195	1.7052765216266	0.0881428642535335	0.563248934824115	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13533857216734	3.54227520340946
Merged-chr17-24583835-1	3.84656657818593	0.982464222689531	0.820152153209427	1.1979048263727	0.23095407062163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40685209581508	1.7414873742332
Merged-chr18-9731098-1	3.2234189357568	0.270808021447401	0.72969347828804	0.3711257253974	0.710543891024506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90847349945043	2.03169262342392
Merged-chr13-57022925-3	4.83704163624384	0	1.36819961822089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90150502-4	3.95966966556723	0	1.34151599792261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143058503-2	3.97621043485358	0	1.32305707146182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94828084-2	3.75230864869726	0	1.30810337684012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92698516-2	6.61122800855685	-0.373158712629722	0.667747260468566	-0.558832262925156	0.576276201626836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44474200079071	2.63840556523641
Merged-chr18-12808909-2	3.54781253766726	0	1.35686274297082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37555756-4	4.55247788240414	0	1.33040342233571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105186897-3	5.37606921399786	0.046807149792824	0.818488207628246	0.05718732335614	0.954395976131121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55269571588216	1.41959898789419
Merged-chr9-37177302-3	3.6000261731899	0	1.33014627202881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131366080-4	7.84197247886684	-0.770776758575725	0.585124520620834	-1.31728671660847	0.187742536063375	0.974055082302289	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26844948381769	1.75520908275751
Merged-chr10-60081253-2	2.74756971677917	0	1.33047304423874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43994774-2	2.91795146143408	0	1.33540721553176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96244717-3	4.4698460596043	0	1.30218058900255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7775211-4	4.16457294391011	0	1.31205034257398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39242864-2	2.6671438430507	0	1.38519400601992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21077614-1	2.84187670592078	0	1.38328557629588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131668895-1	1.59858982584352	3.64001848649722	1.52133015507235	2.39265518688421	0.0167269526876098	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.79135360541375
Merged-chr11-104331619-1	1.46276839296403	0	1.4527204385439	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53097224-1	1.9235635742528	0	1.58235125346651	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64315191-1	6.71314142699035	1.37180100007804	0.892129765413183	1.53766980237757	0.12412937075314	0.72669394922368	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20566787876413	2.54053031365018
Merged-chr4-59832984-2	4.71836522240098	-1.84556795309764	1.1371466296748	-1.62298150910004	0.104593357721805	0.642847775930123	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19197720480268	0.423054662900563
Merged-chr2-7653722-1	1.02191681336567	0	1.65585718031352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125483977-3	12.124951637802	-0.521427246822514	0.649001509422675	-0.803429944695129	0.421726273019789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61161634889129	2.84542199182619
Merged-chr1-54477388-1	4.29386686552938	-3.68175579503986	1.06302275805949	-3.46347786736079	0.00053324046099229	0.0115573490171265	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47915325019682	0
Merged-chr2-83759867-1	2.31579094170752	0	1.4906746975565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48860689-2	3.82229200032685	-0.272659184671524	0.848092005878401	-0.321497175756445	0.747833652179674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16780611512941	2.08954570417147
Merged-chr13-107646406-1	3.61320809680136	1.94585478944751	1.12315574155503	1.7324888414437	0.0831865621467975	0.540098540005742	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.81534621159246
Merged-chr14-17812637-1	3.08152486755311	0	1.35994742155915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7089022-1	2.23229289374392	0	1.34900483528552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95605499-1	2.80672439940617	0	1.38551235137841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105921258-2	4.61112975461661	-0.66718307526985	0.828686505240153	-0.805109134818721	0.420756704888918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69653078690206	1.58458601743443
Merged-chr9-110710821-1	1.87484157297905	0	1.37906547128584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148790550-3	5.13828072536517	-1.19198234942885	0.859350589020628	-1.38707340712632	0.165419380000914	0.887785717508604	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27635573169674	1.15307255889252
Merged-chr1-43895945-2	2.67384253072461	0	1.38564321987955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108032786-1	1.69323101906669	0	1.38085156810038	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136437263-1	2.74505817971211	-0.743316446673446	0.931749158253602	-0.797764548633089	0.425007137659745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61721560941774	1.43116362910629
Merged-chr10-80774417-2	2.73260476164656	0	1.44275134105068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86613175-1	1.96172744112146	0	1.41507719228099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152674024-3	4.43382945582143	0	1.3653207215835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-123250040-1	2.68930095925226	-0.114282862880242	1.24422436913807	-0.0918506868334455	0.926816671965004	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0730178500895	1.87744667331019
Merged-chr10-120846991-1	2.10715875213609	0	1.41176750002726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63948217-1	2.64650657936286	0	1.3710196290127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22802861-1	1.64327895865294	0	1.58830052052946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132903708-1	1.35404182704193	0	1.42099601288424	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27527431-1	2.16415124703825	0	1.39698809142125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57338257-1	1.79939815607052	0	1.37938101789168	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54684568-1	3.84064567644572	1.51539978423463	0.975707875889662	1.55312857637115	0.120392420340086	0.712089686614738	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	1.29451429493117
Merged-chr13-24487230-2	2.16864125509888	0	1.51153196685324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142924698-1	2.31248962477406	0	1.40545901562177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167201553-1	2.63822589687307	0	1.40564806063029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14021623-1	1.7643535094539	0	1.5550380840314	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59125767-1	1.23906450513687	0	1.44751170233124	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63446106-1	2.22732040747877	0	1.36697514712189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54019513-1	3.44610233269519	-0.360633899284989	1.20272029335884	-0.299848519457376	0.764292703913603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	0.469435083901436
Merged-chr6-129922844-2	7.25221818662149	-0.98031807630814	0.582707081637593	-1.6823514029607	0.0925007189702278	0.584409937332351	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11314253269419	2.66393867450529
Merged-chr7-67234930-2	1.95920747038355	0	1.44602542588006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5537414-1	1.63323345574599	0	1.51768412255011	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61518157-1	2.83635094918114	0	1.35164495256421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3429939-2	2.88977869944185	0	1.33915169165471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36940926-2	2.44373990348314	0	1.39963470104746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77423380-1	3.50193671233578	-0.556288405298494	1.21676704620583	-0.457185627300749	0.647537628093662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28401269025248	0.735627456805112
Merged-chr11-102438455-2	3.19589826132108	0	1.38339737096814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50083591-1	5.84302318760914	0	1.31334508500059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90505435-2	6.3420943047006	-1.89174465554638	0.714028068955532	-2.64939816485589	0.00806352693833105	0.0936412353495968	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83010937410327	1.88903407179563
Merged-chr6-108468105-3	7.22631088486558	0.514049273305927	0.67806300931148	0.758114314225612	0.448382551157959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28729851995195	3.09247499969
Merged-chr15-84133712-3	4.44189436944267	0	1.34947502873474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20533410-3	5.24772134711852	-0.571244863790852	0.979668945275901	-0.583099899762541	0.559826051211299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57963375818439	0.581381506691384
Merged-chr7-142284086-3	7.71012872416781	-0.375659697360745	0.590217873184608	-0.636476315659195	0.524466013295269	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83848695102092	2.48246463423721
Merged-chr5-104032629-2	3.58051875254149	0	1.33788765903587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112180343-4	4.124683370402	0	1.32586586308207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132048377-3	4.17898207076592	0	1.33355605494301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115711115-2	7.50879504675334	-0.888483591885376	0.541611116178583	-1.64044563589131	0.100912543211339	0.625223385672529	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84142521575991	3.20213796229157
Merged-chr7-123240273-4	4.56056995899977	0	1.32389650401962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-138840923-4	4.11610645213538	0	1.31015068408616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62009001-2	4.26674561580846	-4.38372575684311	1.10814267935061	-3.9559217766182	7.62401067255829e-05	0.00256011614290336	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1129809800589	0
Merged-chr16-7455751-2	5.98422014450402	-0.950017159730745	0.711795546732198	-1.33467702079931	0.181982077611281	0.951953317610214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80416426977246	2.3959115977886
Merged-chr12-34712129-2	7.16582604934256	-1.02724197493069	0.606332067034341	-1.69419041278004	0.0902291060435468	0.57390773442036	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76422589120547	2.44823763137854
Merged-chr15-93252632-2	4.60125469498071	0	1.34680241069028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67451099-3	5.05862109450428	0	1.31783730837774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-103443963-2	3.59289227194213	0.550066372982789	1.09949684049593	0.500289180216908	0.616871471519749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.809132918793411	0.683637474991079
Merged-chr7-31019379-4	9.27747392803515	0.54834100629691	0.569789372904737	0.962357376904934	0.335870116409278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84589781609627	3.15436071963416
Merged-chr14-25614098-2	2.85107958851485	0	1.34251150036307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32859251-2	3.40934952863959	0	1.3444651066282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88234237-2	1.62198993046943	0	1.61390945017473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95797714-1	6.28451469379969	0.987362388183913	0.814905229210433	1.21162848487373	0.225654625695215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17514715678456	2.27416815045033
Merged-chr2-68826488-2	4.30365137483028	0	1.31924349999402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130690957-2	2.9678665877075	0	1.318249232361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-16956302-1	3.23020075168582	0	1.32209027063467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58145457-3	9.05672325057259	1.3919581275398	0.7613849152551	1.82819241575522	0.0675206788686302	0.463029308568529	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2086765618732	2.62100587342732
Merged-chr11-61104487-4	4.54925589341135	0	1.31666811142064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58100122-1	4.42938313839048	-0.387077899356972	0.930776466836509	-0.415865584432489	0.67750836426192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26922239349455	1.88737785686289
Merged-chr19-34826422-1	2.38325730803702	0	1.34610194855349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77861567-2	2.00935553326819	0	1.4523946890134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89939664-1	2.47595112778731	0	1.39976923417274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46375141-4	6.75182998296863	0	1.29479441654953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116085660-2	2.6870047022365	0	1.39149191474748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29650268-2	3.30770875199405	0	1.3949578320255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55023857-2	4.35637576952676	-0.342721200033117	0.862410524855259	-0.397399138989679	0.691073150324061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90816735437719	1.26648457881507
Merged-chr2-152763613-2	3.29797072071768	0	1.36788015463776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-71307663-2	2.80666434373796	0	1.34676431337711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58983712-2	3.41456076428131	0	1.34141382348883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101231208-1	3.07053713957984	0	1.33590675323789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191734014-4	4.65896547250037	0	1.34407457319615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101673370-3	4.35791890214496	0	1.31786172752883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16950362-3	5.51247303601275	0	1.30276884764211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-14387607-2	3.17991076817188	-2.37010314066063	0.978029713497195	-2.42334471841937	0.0153783262002348	0.1527454178265	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08231462070971	0.73596151290311
Merged-chr7-109480987-3	6.45787444363389	0	1.32689602065634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70021588-4	4.09112426620612	0	1.32023185412083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32384937-5	12.4120730011305	1.04535920709094	0.423910132059616	2.46599250178792	0.0136634194432861	0.140076844515371	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41073770609241	4.42998654975951
Merged-chr3-9647207-3	5.00435280331974	0	1.30321015450399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29870387-3	4.75225826355927	0	1.31758920861272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173802063-2	6.16003452900599	-1.53443934006589	0.657769503522364	-2.33279185466786	0.0196590723897007	0.184867138347587	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41114571909838	1.77338015316878
Merged-chr11-83562479-2	2.96267800919952	0	1.33415209714498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148900854-4	10.8773796436001	1.2942656931542	0.627395305527571	2.06291899501203	0.0391203250850747	0.3113331826829	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62163168489464	2.34574658350842
Merged-chr8-88209914-2	3.95135291656266	0	1.36581850840326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108070479-3	3.62904808999504	0	1.31352496091134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73968312-3	3.81613276829259	0	1.3079513335881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5474567-3	11.0225705666185	0.93269925984739	0.5093975947792	1.83098481305486	0.0671028098987946	0.460937686917548	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62594107113845	3.74213223057347
Merged-chr15-38452841-1	1.76477648692862	0	1.40881060928698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74824803-1	1.95829346409228	0	1.37642025742721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114673059-1	2.19226674113523	0	1.3539244959969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44020201-2	3.22178944236688	0	1.38528591638226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84420353-2	6.56685329845293	2.3173408693302	0.739463517364079	3.13381365667733	0.00172550395318477	0.0289188974928987	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79713440135896	4.48904553775198
Merged-chr4-101660746-1	5.20010669027049	0.180911740086803	0.737513601855556	0.245299530248169	0.806224515449156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8489323688197	3.01292578228943
Merged-chr2-18928400-1	1.67832309129013	0	1.41452198429311	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63130213-1	2.12709473129787	0	1.46168733950259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79686935-1	3.14205698627419	0	1.32614231546172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-70718320-1	4.60476497436218	4.51751492855563	1.00127210647405	4.51177546977105	6.42872213142558e-06	0.000355708108721538	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	4.44912687009306
Merged-chr11-68408340-3	4.21214599099707	0	1.31332119703256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32480980-2	2.78252871749777	0	1.43988995773642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173083820-2	2.69417255271879	0	1.34494220931075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162186809-1	2.36149808929618	-2.61093077830345	1.32141383257913	-1.97586154611947	0.0481704604754728	0.361228702115015	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37331776431736	0
Merged-chr4-137676300-1	3.76953738182925	-0.233677393086477	0.983019702196183	-0.237713844966091	0.812103044711902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52638371361314	1.20275690226768
Merged-chr3-89887800-1	2.10210340135518	2.89685111426225	1.2804227243954	2.26241776178263	0.0236716045601425	0.213558356907776	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.11548603074465
Merged-chr1-166731038-1	3.10220457962483	0	1.36959965241901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3000980-1	2.68304405749437	0	1.41236368286303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-84548683-1	1.59134377187292	0	1.59229885825911	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131050701-1	1.96662658626349	0	1.42103090979757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89226283-1	2.12031424126194	0	1.40959531078497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53196012-1	2.11431935769045	0	1.39818020856661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128762727-1	2.25247332533163	0	1.35675199504849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-35065721-1	1.67803070490478	0	1.42642778193727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152692782-1	1.78418852867881	0	1.52942179157858	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25061487-1	3.14897648337013	0.39521953239185	1.3263835954036	0.297967747611949	0.765727779793304	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19875040137061	1.97978184934906
Merged-chr1-134556396-2	2.82856192555914	0	1.34867151602824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50074092-1	2.28778855517758	0	1.40165050689872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79946153-1	1.92571352154001	0	1.40741123036421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106552073-3	5.9950905959358	-3.06263438707528	0.870459405574884	-3.51841150484508	0.000434138585809255	0.00988687112637221	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74174338665253	0.683637474991079
Merged-chr2-58035785-1	1.61342956543697	0	1.37944644261483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53579003-2	2.91888464635363	0	1.34902544849174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70783072-2	2.69114233223498	0	1.34588852743913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159946321-1	1.98368047052285	0	1.38139475450184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40968213-1	1.39245756856319	0	1.48011680430622	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7238786-2	3.32421117919848	0	1.84566426430256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148533106-1	2.86798688536584	0	1.33319497598167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66772329-1	4.95954235544629	-1.30492000119526	0.908318558305636	-1.43663254401566	0.150822431348357	0.832191387223656	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70058291950629	1.88639437725876
Merged-chr2-13279326-2	3.18158976464505	0	1.36740247084112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121658475-3	5.30314936059609	0	1.29988292633687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-81137294-3	4.79006601864151	0	1.34382877202368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22519752-3	4.24084363872245	0	1.34780100386117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11807449-3	4.39563217819037	1.30337491613213	1.30871175925065	0.995922063754065	0.319288014095352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr12-17033295-3	7.32958034496287	0.381582411119138	0.649822356325433	0.587210346650555	0.557062444296349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95909420580861	3.44080092439194
Merged-chr11-8546008-5	12.5514320582971	2.23706825491064	0.62781010871102	3.56328804501674	0.000366238425689994	0.00866481396275827	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19247195431279	4.28069623471308
Merged-chr5-105405181-5	11.7013241842398	1.85540129649692	0.610403736253983	3.03962965214371	0.0023686922465193	0.036941423279487	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60458638733656	4.18657025155022
Merged-chr4-135067329-2	3.63552863631172	0	1.31705473913405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45241566-3	3.75352701785346	0	1.34460529407817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100731991-3	4.704553114569	2.28420832275673	1.17101492830747	1.95062271841249	0.0511019426519047	0.376599474966884	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.07938469868934
Merged-chr2-84783501-2	3.96235792558601	0	1.322954212814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91971048-2	5.31365989195961	1.62678824726848	1.1595766083831	1.40291571553591	0.160641973932868	0.870568123123005	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	1.13404870833161
Merged-chr2-128765839-5	12.8388975184785	-0.0558567165972753	0.427916254392019	-0.130531888013079	0.896145626972093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.50792991031417	4.47431195582478
Merged-chr3-88292150-3	4.45870108054559	0	1.31205906757622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-123209681-1	4.38477398456805	2.3525833254529	0.749246256742964	3.13993337207954	0.00168986263490866	0.0284236200104869	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16903949172938	3.17091477531552
Merged-chr11-88599531-3	7.42252603386476	1.26968423053302	0.895414508848702	1.41798487514519	0.156195180606021	0.853262855031017	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27951327172882	2.04904474316647
Merged-chr10-94008800-1	6.89410106796194	0.754556031086244	0.737174203250744	1.02357899633336	0.306034170042575	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72096598880425	2.2786782253812
Merged-chr15-8411377-2	3.14636356029564	0	1.37460007081489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132019147-2	2.76502229890366	0	1.37315681146365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97540328-2	5.37370549625468	2.0989963307292	0.786510536219011	2.6687453429673	0.00761351510369341	0.0894324569415693	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.912753244509864	2.57151361581017
Merged-chr2-91085786-2	6.6786962277133	0.419296035488211	0.626242755287898	0.669542333141165	0.503149585765698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02887696457697	3.34578659902288
Merged-chr11-50099082-3	5.89024390874883	0	1.32913784686583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145219855-1	3.57536825467264	0	1.32499916318569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45571901-1	3.47484414066959	0	1.33700356514808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56447126-2	3.36946246253751	0	1.3263501092502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99891885-1	2.38380917912043	0	1.35404695573545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126483491-2	2.69459520161196	0	1.3612540611905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16637712-1	2.69250158998162	-0.88504425196393	1.31092409896091	-0.675130049608098	0.49959314358448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	0
Merged-chrX-85865074-3	7.13766413941672	-0.681204830965625	0.558660346958164	-1.21935418304646	0.222709791720401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75109204738024	2.8057511416468
Merged-chr14-93701284-2	5.51086818783652	-1.62566618031926	1.16717155010827	-1.3928253992898	0.163672595764379	0.881073353885748	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41959861910694	0.306240821987646
Merged-chr6-70874587-2	3.76744058511563	0	1.3161199419381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10860343-2	5.28375825496216	0	1.32834146819135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85488112-1	2.20186243355427	0	1.45427886968692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97453292-2	3.68677076966735	0	1.33152705762914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25401136-2	3.20465548718056	0	1.3952106636747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83137936-2	3.81994651965701	0	1.32765104697569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3025151-1	1.82589910464596	0	1.65615444324111	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97425789-2	2.31425463578115	0	1.4569987407966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15035045-1	1.88719597196641	0	1.35477856616654	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38695560-4	4.97307844359677	0	1.31567779294178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14449966-2	3.86602170885254	0	1.3346443934875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40408141-1	1.81278905114676	0	1.46428601466777	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161650143-1	4.1975039062903	-0.288944663927563	0.888246936065529	-0.325297675900169	0.744955789666127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20807791701038	2.33289557416955
Merged-chr17-44252880-4	9.98841209910822	0.521155255878497	0.607295260384091	0.858157950300627	0.390805251655592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82739437918194	4.26988956036782
Merged-chr11-70792616-4	6.00916282536725	0	1.30961720697281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37222837-2	7.01610937959443	0	1.35129371590959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138889396-2	3.78305439609988	0	1.31622999854333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56485252-2	3.51123323641377	0	1.33917704126593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-66141059-3	3.45997303717414	0	1.41919590297456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78830140-4	8.02446159946236	-0.131385166227471	0.54505740976036	-0.24104830770989	0.809517676005442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40499417880593	3.30469973617289
Merged-chr3-149101255-4	12.8249936911392	0.869729862469911	0.426122451970802	2.04103270890196	0.0412475760333103	0.323076566486049	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21425677044231	4.07466180698264
Merged-chr5-92096944-2	5.07875284666652	-2.39009098604101	0.811034205205447	-2.94696693518069	0.00320907515370247	0.0466726519015895	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6829546729334	1.07982873328226
Merged-chr18-84784873-2	3.91600142573137	0	1.32293595338448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139298651-3	4.50250908663507	0	1.32995915022739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47627027-3	6.63930380328199	-0.845886388075359	0.550711211347064	-1.53598904588538	0.124541066966941	0.728581966161299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78536585408043	2.87069511350217
Merged-chr4-109649452-1	3.59130859687568	-0.801003017403081	0.832132803481684	-0.962590363042589	0.335753135631506	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58673437433018	1.41926493179619
Merged-chr13-6002669-3	3.17016574802314	0	1.36483329562782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24053535-3	10.6551700675477	0.215998881077464	0.595435768486091	0.362757651638305	0.716785929094532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51248373345561	2.73562029706227
Merged-chr1-7908030-1	2.04177645879625	3.86978582864605	1.93435108692682	2.00056021618813	0.0454398045492451	0.345831524350684	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	2.95710352170887
Merged-chr5-5336635-4	13.4101147903786	0.150638616626395	0.467965486652496	0.321901125025182	0.7475276008698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62108894313386	3.69301842408876
Merged-chr5-92091848-1	3.38037144787267	0	1.32287924840218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92376136-2	9.06136926228593	-0.0884800434196872	0.799781989591492	-0.110630202444144	0.911909596401553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67814151054582	1.88300575199072
Merged-chr15-6339960-1	1.13308603338453	0	1.49830886312838	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55473553-1	7.78402353752029	0	1.29055770493844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67451199-1	1.6376633372156	0	1.41993281523215	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88274532-3	4.34209525907837	0	1.32249638307594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84494277-1	2.34843498369822	0	1.45592335458757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83396372-2	3.60418653994509	0	1.31920620091219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11579645-1	3.28615047067857	-3.94280972228666	1.1306895648255	-3.48708420502239	0.000488317582956053	0.0108021668164679	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68398253635042	0
Merged-chr14-20378470-1	2.36473532822197	0	1.37879844691236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66932040-1	1.47685419413733	0	1.76017159736866	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97396331-1	2.3645116423054	0	1.35668221860344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89458956-1	3.95123782551177	-3.00191634375246	1.01603604833058	-2.95453724174925	0.00313138356870955	0.0458434928158907	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12308125421454	0.469435083901436
Merged-chr3-48308627-1	1.62186952766739	1.30522351250952	1.42884976235279	0.913478482412526	0.360990945410017	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.869764003783424
Merged-chr8-105780498-1	1.16126236915537	0	1.53199900245552	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83721109-1	2.16429606423821	0	1.53317771944071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13429926-2	2.56442410836074	0	1.37254097231833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42847733-1	2.01898996776889	0	1.55992837650869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53087555-1	2.34898900305812	0	1.40542297054502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86630219-1	1.91833715385915	0	1.50141665984947	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106749748-1	4.46264566505579	1.27864740470489	1.08915439747498	1.17398176757052	0.240402328611182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02608626732503	2.91568416616513
Merged-chr7-125607569-1	4.78343486769021	-1.03229925959278	0.958116472139004	-1.07742564668382	0.281290151570019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14727007442268	0.735627456805112
Merged-chr1-57430918-1	1.62404449734946	0	1.39961492672829	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-70333287-1	2.26480970399086	0	1.5025530138891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127541247-1	5.73429978195952	1.20462606887134	0.787529929348605	1.52962576275385	0.126109388742033	0.734927683647273	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16929499271095	3.34292797565683
Merged-chr2-5529036-1	2.66254147449093	0	1.34859617031895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-52077939-1	2.73170301011565	-1.72140503284621	1.01738071571844	-1.69199691546209	0.0906465617480617	0.575615946313965	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48571936195783	0.733321818366247
Merged-chr16-43506436-1	3.27436032685089	0	1.35220450346724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-61649937-2	2.34314503082511	0	1.37867536932664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9790699-3	3.65984647416087	0	1.33778567720847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31364183-1	1.22017674457531	0	1.54545840832662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86627966-1	2.03523886919579	0	1.44224330515292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59931924-1	3.29412928296983	-0.236022926278774	0.712249931437346	-0.331376551770909	0.740360074275177	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43914228213005	2.68850931460485
Merged-chr9-102981005-1	2.18927783940491	0	1.38035550470087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144587289-1	1.51181314509871	0	1.46513255874404	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19992045-1	4.76565066551554	2.39406614786985	0.920161406831289	2.60178934923403	0.00927387961978883	0.104701267732329	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	2.21565186750098
Merged-chr10-83101615-1	1.98259497447746	0	1.42164453677733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105744478-1	4.30274127893534	-2.64419772869364	1.07436916987834	-2.46116307394885	0.0138487403762758	0.141261895936618	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88943146172125	0.918668513615376
Merged-chr6-82125348-2	2.69626189303315	-1.32459492030275	1.42441728531053	-0.929920560472546	0.352412216706451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.68348383313306	0
Merged-chr4-141672973-1	4.94277417931765	0.90592729291467	0.666968389377573	1.35827620520382	0.174376057681619	0.923551456091998	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66633944942245	3.32989721775821
Merged-chr6-3427288-2	4.14808197347651	0	1.34355681420251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120157653-2	4.77032234095904	0	1.31808297463976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46493321-3	5.04678629727478	0	1.30857013707351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133153243-2	6.50351565244715	-3.07271310654446	0.818563845265665	-3.75378551632366	0.000174183921733121	0.00490824603258842	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04086742762267	1.03956264035389
Merged-chr2-58732459-3	4.13791917203263	0	1.30599611343372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162510106-1	3.04890340895784	0.289926302767754	1.08945417026849	0.266120696657027	0.790146255926477	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850239143718389	1.04220233489076
Merged-chr15-95885300-2	4.01495950753991	0	1.34707164043738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43224365-2	3.53842948314105	0	1.36125088194611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-100420077-1	3.05358735890321	0	1.35138612168626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28015962-3	3.23366809301416	0	1.38561210122854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129884236-1	5.44373298822625	-0.187209295084597	0.956219368316161	-0.19578069770147	0.844781818699861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18294433497504	1.00443616959195
Merged-chr17-86300864-2	5.85911343045915	0.788575404792345	0.658071768848457	1.19831216308254	0.230795513200184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75532275099479	2.2484890300238
Merged-chr5-34210453-3	4.1260960428157	0	1.3104963875731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4756995-2	11.858781454792	-0.00950103135846384	0.535045374869917	-0.0177574310604475	0.985832364492744	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93872431277889	3.16123167027831
Merged-chr1-55822812-2	7.65710427787956	0.172604793062427	0.675509397961716	0.255517974410489	0.798323062687581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59700023142748	2.34310688897156
Merged-chr19-43723312-2	11.0351534628278	0.300021420018557	0.559236693292962	0.536483788736996	0.591624236915895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70494459111751	3.83350369146227
Merged-chr2-48930486-2	1.94372338151727	0	1.40540464725686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34913588-2	4.75302192434893	-0.253686818765044	0.93798984271959	-0.270457959362875	0.786807955662754	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17531955015706	1.58148496924487
Merged-chr11-69052966-1	2.73246567458978	0	1.33147220947631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-9132970-2	3.1427702650927	0	1.35835684450008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21272894-2	4.9198126284297	-4.77614074203467	1.06395878121231	-4.48902798338914	7.1548899002112e-06	0.000386080458645087	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38835219817476	0
Merged-chr8-105715268-3	4.50562443857772	0	1.33616427291349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165924805-2	9.45620573321677	0.67150315251388	0.642182441896215	1.04565791386493	0.295719000330991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13537608130555	2.95017138255053
Merged-chr15-61989329-2	3.5257896785719	0	1.32169851653914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-5739808-1	2.96548812301822	0	1.39953522953289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128454909-1	2.00346413035211	0	1.42545246209507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143059055-2	6.18743465604202	0	1.31928193857343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119360734-2	4.52016207992895	-0.210675024257878	0.793558069803816	-0.265481547317591	0.790638523121513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68033710071717	2.21897058092141
Merged-chr12-102182083-1	2.02542659915921	0	1.38391620811048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37073124-3	7.80197022280389	-0.569098065742493	0.646172677600983	-0.880721338846078	0.378468664177283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.33734837946076	3.65849629823118
Merged-chr18-84294256-3	4.62419609541027	0	1.3012064219799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99009772-3	3.95223151002458	0	1.31609219784456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10846254-4	5.54167064430633	0	1.29993956557851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71804265-4	4.39870880585037	0	1.32001412061565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55118006-2	4.71800617898742	-1.37796955186935	0.776029957149842	-1.77566540978686	0.0757880819033284	0.50488816393668	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52943461669475	1.57664565284388
Merged-chr1-88695278-2	3.49845032269612	0	1.31573388780356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38028816-2	6.33802421229605	0.832691027397069	0.76117960160212	1.0939481636718	0.273977713316249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.881635912423707	1.57664565284388
Merged-chr16-33832833-3	4.72931966697985	0	1.30551691453339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94086955-2	3.27404049725057	0	1.32268231764295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100568282-4	5.2381181455125	0	1.3215318609994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133056700-2	9.50923295155308	1.20058876426411	0.535318669939191	2.24275526276805	0.0249126008241527	0.222244206615028	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16073752587247	3.14689525443886
Merged-chr11-119363768-6	13.7176713061864	-0.621245873978464	0.464170080552316	-1.33840137485648	0.180765630972812	0.947410243948456	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08874420036074	3.46390418225941
Merged-chr2-31596694-2	2.71248287739669	0	1.35856510861607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61098374-2	3.15165307759898	0	1.33590974200569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44239084-1	3.90532915935665	-4.1075675913111	1.17798730444617	-3.48693706274048	0.000488586322421102	0.0108044540862705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49150210296491	0.423054662900563
Merged-chr2-156439830-4	8.60207091477286	-1.05806249250944	0.721485735518007	-1.46650507476739	0.142510739693396	0.799082443453289	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68727926567289	1.31734301959449
Merged-chr8-109681664-3	3.7192541750409	0	1.33483948826375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141856500-3	10.5123303810576	2.21303027959453	0.734964018629724	3.01107295527274	0.00260326297048138	0.0397774144490703	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14007479629539	4.77578270445089
Merged-chr5-137760276-3	4.52973439718828	0	1.29856416631975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-175936595-2	3.40442821859447	0	1.32740435699011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68013339-3	3.93242275422197	0	1.33185503724997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129307143-3	4.05327419895347	0	1.31124948325255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101465481-2	7.35512106619331	-0.67379348718692	0.636373892541772	-1.05880127246529	0.28969029404104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66683032658279	2.98372818195955
Merged-chr10-39770705-1	2.48108383151003	0	1.39431592986883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30985443-4	4.16414864526291	0	1.31670565571209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94992335-4	3.68503606567764	0	1.33868791748314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136124802-4	8.33854575506402	1.50660150202092	0.783807047392742	1.9221586575835	0.0545857971088119	0.394968829351392	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16202697745482	2.19193974227778
Merged-chr3-96938914-3	3.51601202567871	0	1.31754438240548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111144731-2	6.26657081288596	-1.82640449827238	0.813005713033679	-2.246484211602	0.0246730097137452	0.220498152728992	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48898701812887	1.26637849737819
Merged-chr4-134119908-4	11.2415718008737	-0.356301943105868	0.543579822882608	-0.655473084369461	0.512163210258221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78447802417703	3.34478687181899
Merged-chr4-143389416-2	3.40683287173707	0	1.33982976578565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21363501-4	4.82971869987238	0	1.32392892132868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84458758-2	4.74583936242855	0	1.34029970448377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150589562-1	1.54035002921772	0	1.51515870285599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127410726-1	2.14457778797267	0	1.34487863120658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103059459-1	1.93916857210027	0	1.40329895795984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-91697816-1	2.75127555398156	0.457537729057299	1.32455335784569	0.345427933383869	0.729772680252724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12208762964035	1.57215779683075
Merged-chr14-7851924-2	3.57072687745265	0	1.34469685571721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127507302-1	2.80796156525055	0	1.37080702747536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146828182-1	4.82019520514001	1.12056683955924	0.603856512212489	1.85568395288735	0.063498619421515	0.442317533814979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74036064597295	3.58185980315915
Merged-chr6-129747873-1	2.09579667623008	-1.41106062957647	1.0129261270566	-1.39305383866124	0.163603510662818	0.881000534287247	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80389482971063	1.15868211970568
Merged-chr6-28949462-1	2.14346509527817	0	1.37996075983479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24027585-2	5.16861493580733	0	1.32150265282514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108784297-1	3.86451422983499	0.179024041808652	0.931021924983271	0.192287675515126	0.847516871778289	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2466467558077	2.4150019944704
Merged-chr2-122753979-4	9.95654545971127	-0.508037600886209	0.491265167442929	-1.03414130403461	0.301070109309756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81588674506669	2.84403867716045
Merged-chr17-24674352-1	5.23222703195486	0.104312507359049	0.722571243470776	0.14436293763643	0.885213881674081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61593320172556	2.30811930973386
Merged-chr13-9826415-1	1.57343779345469	0	1.45679095504378	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43264646-3	4.28674923452577	0	1.3217217213503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5095596-1	7.39864921597237	3.78174351273458	0.951719537251408	3.97359029074507	7.07973027530598e-05	0.0024170953739297	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	3.91056167177361
Merged-chr12-17235576-1	2.06591911167367	0	1.46038641230993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45539662-3	7.78079172275824	0.749678126565699	0.575168393683424	1.3034063324737	0.192436075739182	0.990775906496424	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26948662469194	3.28226228333929
Merged-chr17-87142451-1	3.47271540681438	0.0837981407714999	0.900433751042753	0.0930641934228441	0.925852563452964	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47734662623269	1.59691199589682
Merged-chr16-31285367-1	2.32803840834356	0	1.43235088756343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-44064826-1	2.911599752559	0	1.3576388830423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139331878-1	2.81187735924011	0	1.37441033653069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83724786-2	2.84572595535583	0	1.33682010002373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39402764-2	3.24436139325762	0	1.33263715100783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27735353-1	1.92512060813586	0	1.48338553225787	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124301714-1	3.16796522095452	-0.920974235343005	1.08281427222654	-0.850537584298039	0.395026273915873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39955168887681	1.84022605426951
Merged-chr17-80252922-1	1.69636791424548	0	1.39618614741097	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31321718-3	3.31538790025793	0	1.3584453790608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30646999-1	2.28028063825069	0	1.48389677072123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111412207-1	1.72070417767556	0	1.42306781936022	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85393697-1	2.25521230336832	0	1.39975555045799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65625984-2	6.40064101170675	-4.586273074773	1.09593843778132	-4.18479078446936	2.8542886077756e-05	0.00116572714602315	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3423776655701	0
Merged-chr12-16592788-1	5.93983078621205	1.14841542099798	0.849198710751275	1.35235181878926	0.17626279482614	0.930254226819484	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83710959621866	2.67442379569422
Merged-chr1-64308174-1	4.38264972989913	0	1.3299412058129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64667178-1	0.904329986836248	0	1.68015203783423	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102181649-1	3.21588420322934	-1.6076955964943	1.25942794862521	-1.27652844154305	0.201768779395823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.830238426310563	0
Merged-chr9-40821523-1	3.70453222511729	0.12337472893045	0.86989160275141	0.141827704210759	0.887216100469879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27506149139998	2.46812004905329
Merged-chr10-127558025-1	2.35996014651218	0	1.36616068138663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80439238-1	3.56713544059358	2.0195800447357	1.20376825083864	1.67771499483286	0.0934027507392628	0.589083693640369	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.46402698790757
Merged-chr5-77173794-1	1.38938744427206	0	1.52752626402643	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87656289-2	2.50896827467629	0	1.36788838346948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-81312874-1	1.66477711474869	0.702469513714342	2.05918915902976	0.341138894711999	0.732999021782653	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736070423127282	1.45391938817053
Merged-chr15-78859202-1	3.78451354906144	1.63748010196205	1.16108769973188	1.41029837999332	0.158451596687311	0.862129728320488	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45271260926821	2.96929568164761
Merged-chr5-110479352-1	3.28106596357108	0	1.33137179278006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123364559-1	3.73557658864785	0	1.34047463288143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31074567-1	6.95929769569971	0.488883914710147	0.678455881341434	0.720583206889638	0.471165989006985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59488879808018	2.32198339548792
Merged-chr2-27690485-1	2.8515257390396	0	1.34070797762321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130896600-4	4.68912612531506	0	1.30164677112145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145339075-1	4.99728010489569	0.888128483491825	0.852340629105619	1.04198773725448	0.297417364332567	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90066300958273	2.73990696123344
Merged-chr1-181316800-1	2.89284069183574	0	1.34602450460786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19462693-1	2.74126325109747	0	1.35445939257374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95402924-2	2.48888689201799	0	1.40225661681708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51977968-3	5.38085184849064	-3.47946760218096	1.08031931149679	-3.22077701023424	0.00127843577039569	0.0230122679153899	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64434137762289	0.423054662900563
Merged-chr16-30262270-2	3.652782047384	0	1.32484142893345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150388746-3	9.57732702999889	0.21962026510427	0.636700995013604	0.344934697486342	0.730143464786252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61935587193264	2.58209634937421
Merged-chr7-112240970-3	5.50763680520007	-1.5249702052828	0.787701387047935	-1.93597501585966	0.0528707610019494	0.385892186801451	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06240237635867	1.35032549026822
Merged-chr2-166750804-3	4.68075032682983	0	1.32978182178829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58198710-2	3.25811936893215	0	1.31744997283976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150178398-2	3.92608718149296	-0.226718630057454	1.06577423309393	-0.212726694845392	0.831540143815797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21190027973509	0.890396206374751
Merged-chr16-76321696-2	3.34164614390889	0	1.3308134841767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80833176-3	8.77413844650348	0.311166279118689	0.677104896462585	0.459554022935475	0.645836367004863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80749691775851	3.03916278098946
Merged-chr17-45629341-2	4.29727964776666	0	1.32209921171684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12796138-2	3.14357246247217	0	1.32821953003529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34690981-2	2.78313765186579	0	1.41738193397822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101260678-2	4.26693699664729	0	1.33905660924094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64298819-1	7.25955006562026	2.49956626632557	1.02538755342417	2.43767954660513	0.0147818714124058	0.148081583522163	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.40264952818025
Merged-chr8-91343308-1	5.09855817153432	0.195441242158748	0.901697026554761	0.216748238491478	0.828404552620792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72486348881348	1.21171060354126
Merged-chr2-31024834-3	3.56057653111197	0	1.34020004367137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151039406-3	3.26890535941987	0	1.3215373745182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78277517-3	6.41263570582673	0	1.31176498663628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25834647-1	2.41795167833605	0	1.47481296308347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46588039-3	6.80574325561531	-1.17954958020857	0.644643166291169	-1.82977132449085	0.0672841404209749	0.46174642301502	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46758298967704	1.59510946442266
Merged-chr11-116095241-2	3.91017326741328	3.35128418046277	1.11233146156021	3.01284670646831	0.00258809614366382	0.0395698948534993	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26501898168246
Merged-chr4-119004423-2	4.21330775440644	0	1.36480050232313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41121206-2	4.84620899901402	3.21020789012105	1.01219712343778	3.17152441534119	0.00151641120449055	0.0261731131982671	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.68884729081939
Merged-chr15-82138736-2	4.28746006106753	0	1.33918858534073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63343411-2	4.851749995307	-3.11193249207444	1.03075751542146	-3.01907329853621	0.00253549179449999	0.0389204244311478	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10417146965136	0.61242769162773
Merged-chr16-91534675-3	6.23741164745107	-0.674665831413527	1.12320195897257	-0.600662976078375	0.548064483518749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752351597074039	0.469435083901436
Merged-chr13-12589192-2	4.004284697067	0	1.34313451684063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33101521-4	6.26990973197747	0	1.30128170625991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84895692-3	4.20111229564588	0	1.30804212594331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58990609-1	1.67065611532202	0	1.47348686665759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166149569-1	1.40328394187124	0	1.52267842390371	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171628093-2	3.94102235887963	-2.64390403712988	1.11949372340335	-2.36169616841818	0.0181915445546537	0.174124017938832	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47632542958245	0.563523181795778
Merged-chr12-55506140-2	3.35611983843113	0	1.35469586710315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91180819-1	2.55850954319273	0	1.36330408561979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-161177902-1	2.16446168215964	0	1.35495435136098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97125544-2	6.47950463294691	1.52029107790192	0.686730563450797	2.21381012993292	0.0268418429401554	0.234964108341245	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09125621803308	3.39324960017626
Merged-chrX-77638235-2	2.67142961812145	0	1.33216875914415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6331858-2	3.34953712396455	0	1.31867868211441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169719553-2	4.14732397135598	-1.17686976063049	0.82561276736435	-1.42545005013365	0.154027149093192	0.845234975196818	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91048434665494	2.01259914296816
Merged-chr5-122763637-2	3.13331467443244	0	1.36321028987307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9032832-2	2.37441122902881	0	1.4002682498905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48913066-1	2.35632598785127	0	1.36712069497046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100129381-2	2.26684195219856	0	1.41267742871702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34054918-1	4.30894612041257	1.13372047508235	1.03097904296146	1.09965423916452	0.271482800043664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6521894365044	1.9046899025295
Merged-chr12-104069856-2	3.33737772857771	-0.14586902762094	1.02735613359422	-0.141984870534248	0.887091956172321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68833514701275	1.34557707159302
Merged-chr14-76073331-2	3.28485645686429	0	1.37518407974602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61068595-1	3.22266784669586	0	1.34603555018302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26750997-3	6.50926151993919	-0.509946203062844	0.754622513204593	-0.675763304353719	0.49919093641032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10701288378417	1.36759862365701
Merged-chr4-150626555-3	4.96002524905768	0	1.32032113487239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86363902-2	3.03770220074537	0	1.35498948304361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36064776-1	2.88971141109096	-0.944844293902264	0.965277833551482	-0.978831442162058	0.327663271264095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15745507009536	1.13404870833161
Merged-chr19-17318928-4	10.9555434423042	1.16684693596094	0.444387121447937	2.62574426585323	0.00864597486984097	0.09901504974494	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5024679035729	4.6470815216468
Merged-chr8-94186827-2	2.99819682506393	0	1.34569961241183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96464779-2	3.29920509434231	0	1.33140722389959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8925466-4	5.76934190402323	0	1.31377036932686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4934838-4	11.1602000414998	0.537339735431976	0.535200437248179	1.00399719065028	0.315379967712505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08831221773197	4.13566975801695
Merged-chr8-108574295-2	3.10264375096038	0	1.32592180540731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58542982-2	3.10553386265971	0	1.37336238519162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24851067-2	4.44372053312067	0	1.32969889826733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117139290-2	3.3000569540906	0	1.32336032813444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98878849-1	3.45578663445214	0	1.33271648768362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25782896-3	3.16094625492419	0	1.3795613863342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43530676-1	5.15239804050577	0	1.33403915908422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24130006-1	2.79781032494448	-0.693450229727953	1.14291519965321	-0.606738128899118	0.544024714018076	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54653937835888	1.52525172700064
Merged-chr4-133092774-5	9.59765184534709	-0.703771977692133	0.629375284389258	-1.11820720506219	0.263478507772579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14327057175606	1.57132087663558
Merged-chr8-94801919-3	8.2119954021413	-2.96338035146225	0.857108299564017	-3.45741646997191	0.000545381286582252	0.0117541179264524	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60716670294321	0.581381506691384
Merged-chr7-67384366-2	4.42716454723083	-2.21268597432057	0.884267601334058	-2.50228095090489	0.0123395958899544	0.130181342109293	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05255873864132	1.04220233489076
Merged-chr4-6445289-4	4.15701472631171	0	1.31239778513809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94199670-2	2.91635888913093	0	1.34624394893968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20585521-2	6.71530552539553	-0.747722223207563	0.610632011813921	-1.22450544475454	0.220761613608915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64178856613208	2.95613461951435
Merged-chr10-44149054-1	3.30618603568578	0	1.35737424671367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136489188-3	3.35971678682724	0	1.32419106993188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158348119-3	4.03314968413236	0	1.33136891901216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98042480-3	4.29635660338903	0	1.31117365332573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34190705-3	2.99239535390008	0	1.33927622779487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165624781-2	3.01907295142	0	1.38915236450881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80260863-3	4.48083454974733	2.44564069117208	1.19748598194232	2.04231258490831	0.0411205345406156	0.322615253942979	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.869764003783424
Merged-chr8-7964910-3	9.25567422671785	-1.09044400365216	0.742334514907821	-1.46893884327548	0.141849377776643	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1161816284959	1.54723293661753
Merged-chr10-117144267-1	2.3100140037088	0	1.41722151598391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27119370-1	2.29204438277215	0	1.4836332663633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110718731-1	2.98157846452456	0	1.34836130272199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30596091-5	11.0688463191354	0.894059251211087	0.801336025407907	1.11571079155711	0.264545949752819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17433619252548	1.34805514843284
Merged-chrX-42540871-2	2.94103907804885	0	1.37085447873368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55792999-1	1.97293589047999	0	1.37857452388011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77497727-1	2.07155281332734	0	1.42922915771601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101780310-1	4.21534762648042	1.17960063012802	0.886294455227762	1.33093536033111	0.183210280970259	0.956481130949667	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73795038057429	3.2731134202425
Merged-chr11-5895338-1	2.41403059427383	-3.56897708120795	1.20717042079046	-2.95648155367406	0.00311170843887876	0.0456263886272795	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55172172340457	0
Merged-chr6-73711724-1	0.966213702032484	0	1.66328198528735	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111426642-1	2.10465952875788	0	1.37633014612208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3259742-1	1.60260393533747	0	1.39268692569369	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3213930-2	3.5439305753447	0	1.33125492914762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64312184-1	1.45228044793514	0	1.40683838329462	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11475188-1	2.09001155902622	0	1.34786065106733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60848939-1	1.09835281348204	0	2.27248954337579	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17838659-2	3.26380205181446	0	1.35577923136918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24927203-1	2.78485535190343	0	1.34079959499695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78184340-1	3.60347357907505	-0.471160610719636	0.927300279196096	-0.508099287027175	0.611383715243568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00563158386852	2.12367293725842
Merged-chr14-33371385-1	2.60123180335537	0	1.35876395094146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49529169-2	2.68700646607802	0	1.40632444644282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34363313-1	2.07086983864981	0	1.38705358829038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113664493-1	2.75400950935915	0	1.42038540364581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56076020-1	1.92816605827116	0	1.41210066981985	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61385595-1	1.68394142432574	1.93005076024832	1.56368720717054	1.23429465394214	0.217093127309814	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr1-156469451-3	10.0846075189632	0.387940777509283	0.660189513286129	0.587620326742676	0.556787164270169	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14161838597074	2.37475311282297
Merged-chr7-31100985-1	3.30648476578987	-1.77291063949185	0.951532773528904	-1.86321552847491	0.0624319489927902	0.436515957509401	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72526372884034	1.10669213789164
Merged-chr4-11454546-1	1.98011563811523	0	1.36875916569052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12210504-2	4.2443093885347	0	1.30454666780455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103358386-2	2.12409315090566	0	1.41459333557285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8790615-1	2.89373568503104	-0.19819944567702	1.08123520018565	-0.183308354780708	0.854556079304217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91623362358306	1.59510946442266
Merged-chr2-104132915-1	3.22008184059206	0.146238229101585	0.912561410420915	0.160250288289237	0.872683916890109	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35182618971292	2.7767501314117
Merged-chr7-102142189-1	2.16668566934815	4.04915652137412	1.23982334361467	3.26591408544455	0.00109111348135765	0.0203017942917987	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.92049674076937
Merged-chr1-161736978-1	8.47716593807035	1.36137846308757	0.574659118756619	2.36901916049495	0.0178353294585273	0.171392270411313	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09585072138983	4.32545758459001
Merged-chr10-84055913-1	1.95271468064916	0	1.39547445266193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51821018-2	2.80915458831512	0	1.32690522882985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34842399-2	4.98116695187293	-0.39710644748284	0.77447231889595	-0.512744533011761	0.608130033995301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25059452659604	1.62042974503458
Merged-chr11-95704251-1	1.50516711076042	0	1.55159183191807	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120837595-1	0.842796649956115	0	2.20496242101332	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125578606-1	2.87379048078634	0.00739909808118478	1.16417667776383	0.00635564877952811	0.994928960105112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31273148969025	1.14490468848716
Merged-chr1-52366844-1	2.50969491967354	-4.02019953142428	1.15437949723719	-3.48256317878646	0.000496638016371852	0.0109380882432878	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29039384493616	0.382164212378408
Merged-chr2-28418253-3	3.28881135619183	0	1.35312863960346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112635370-2	4.37117351116753	0	1.32127034261095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20003257-2	3.54590954535308	0	1.33075066113258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30380697-2	3.09920870281278	0	1.38998977330452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9782498-1	5.89917660857356	1.06785531730183	0.733996107561534	1.45485147169164	0.145710384999791	0.811790817334912	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31747991449933	2.06205865679497
Merged-chr3-51636855-3	7.97989118127746	0	1.30986505063772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12247291-6	12.6325519340563	1.32574969422959	0.47786255552637	2.77433265883172	0.00553150837037091	0.0704329590744851	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27435776749408	4.69831556690915
Merged-chr6-127251805-3	6.71727157270246	0	1.29204707001326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19319781-2	12.7083399793216	0	1.29869668352715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16153711-2	7.46271953818334	-0.149652647414728	0.499386359579203	-0.299673077856651	0.764426536090807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3719547836798	3.26702399068743
Merged-chr10-95867748-1	2.52898648818182	0	1.34701292941234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129284562-2	5.26903061034413	-0.576816139654391	0.885485875991024	-0.65141201604015	0.514780556042071	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13537746202475	1.46894927517136
Merged-chr17-81424556-2	3.46595318418258	0	1.35057674273328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169159699-2	2.19713513744971	0	1.37132765663181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111626092-5	9.80863353799209	-3.52034449265472	0.940881813014418	-3.74153740029916	0.000182897951925362	0.00509230914636332	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62090065913443	0.61242769162773
Merged-chr11-30800277-3	4.56965641359727	-1.72533657031976	0.848110843051819	-2.03432910268115	0.041918424792268	0.326639802823223	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75627997120951	1.15637648126681
Merged-chr7-19327996-3	3.69679040438693	0	1.33587883628391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47353014-4	9.1919549224314	-0.383746233870532	0.636183866911893	-0.603200197033097	0.5463755166384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53964392611052	3.30483543417642
Merged-chr8-47867274-2	3.43325220476671	0	1.32328784568585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191314093-4	8.75225732144376	-0.374751566755794	0.586156198528483	-0.639337377471379	0.522603477869644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09478624764189	2.77917504929676
Merged-chr6-116074027-2	4.03697697227335	0	1.32205749582751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55398485-2	3.17854192158931	0	1.37395718847387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106033569-2	2.64466426865642	0	1.94668552659324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3595364-3	4.77511354953352	0	1.30528334566671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8756778-4	11.1240695882821	-1.49317293698978	0.561082940141548	-2.66123389282357	0.00778548543720337	0.091043366388599	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6284503524602	1.99834080004871
Merged-chr13-58687077-1	1.65262171267819	0	1.42103875937029	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120941094-2	2.76614138789316	0	1.3430877866517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90324331-2	4.35698146283411	0	1.31743158608671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87201640-1	2.54480340324876	0	1.37169854589119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-160751012-1	2.64854988822702	0	1.3207765906511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63609018-1	3.28087651452437	0	1.39084348683985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47736946-1	4.13053363208541	0.93401810327269	0.843323827503403	1.10754383169486	0.268058872534105	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44603679751233	2.43918820551122
Merged-chrX-106030314-2	4.30043922015248	0	1.32113760321434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68144463-1	2.97013276448548	0	1.3442748016506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49817050-2	2.34401126203586	0	1.36701925356407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133829970-2	7.11839812950347	0.333042525894831	0.66801801772958	0.498553208230455	0.618094176092157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95959237270708	3.27013095979932
Merged-chr4-88738660-2	3.0705145464257	0	1.316824646991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63424932-1	2.27671459421028	0	1.3939955982911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34624899-1	2.82033063707516	0	1.34048266110829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139263336-1	2.17991386126224	0	1.3892487248562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87539738-1	1.55681752644891	0	1.44329195135908	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135956498-3	9.78143473650067	-0.38638037235641	0.584641020267713	-0.66088481471841	0.5086861851463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40785859338213	3.05750724623645
Merged-chr9-24510673-4	7.42934123913588	0	1.31552227860629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102619926-2	3.66985721640009	0	1.3649035670044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100198837-1	4.28955793208924	1.09958281145423	1.03890000404024	1.05841063353355	0.289868273661402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04328208259895	1.26514550294121
Merged-chr2-126495997-1	3.79968377378734	2.59813728918164	1.133974114342	2.29117865771497	0.0219530828042329	0.201622789729502	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.20275690226768
Merged-chr9-123498072-3	4.5371928509277	0	1.33444397314353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141713809-4	11.5080049160567	2.31780154774742	0.586992643251922	3.94860408284995	7.86082367711619e-05	0.00262078257145324	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92748420440788	4.24824619493465
Merged-chr7-92848475-4	4.68045634120497	0	1.31161452908372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64110175-1	2.48488461530086	1.61962639837533	1.18768020057171	1.36368897755111	0.172665474608163	0.917093237726168	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.20275690226768
Merged-chr8-70863443-4	10.4700971020511	-0.582895737501564	0.520148822260342	-1.12063262004238	0.262444273960199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45937459500623	2.98445054292691
Merged-chr10-127508427-1	3.13757319029301	0	1.34841849204026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63250249-2	2.7879821167835	0	1.34624460048571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103036875-1	5.87375818110468	0.452887395813351	0.572519699993911	0.791042466867372	0.428919210529833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70025006166409	3.09928038700072
Merged-chr5-135870707-3	4.44533832849578	0	1.34006600043736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60874111-2	3.7082685554726	0	1.30889426647897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103387616-2	3.45073738095794	0	1.31609418656783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75099971-2	3.22063953711455	0	1.39750392700439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33435971-2	3.17759176989939	0	1.34780101337703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34101169-5	11.1295828641431	0.536142755217863	0.451454224270015	1.18759051614765	0.234994776060799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77933187814933	3.8203591044281
Merged-chr2-27565547-1	2.98366854655671	0	1.3760888623523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133613049-2	6.7382361913826	-2.20756897588157	0.929506709093374	-2.37498982447884	0.0175494339802825	0.169242224450345	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85135781866295	1.14490468848716
Merged-chr6-47841053-4	7.13152411871801	2.16026453400647	0.75187271803566	2.87317850772717	0.00406364435725703	0.0555994355463396	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53323502905656	3.08206008520384
Merged-chr5-136395807-2	4.97896130248856	-0.355555225879623	0.837768268056363	-0.42440760701586	0.671268573934525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09726102371446	1.91160626283417
Merged-chr16-91386142-1	3.03221823181258	0	1.33216528860432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72318641-1	1.80310790732243	0	1.40170462082179	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80847671-1	1.61112292506	0	1.44197576833505	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9992462-1	5.22668532304563	2.41576340371084	1.01262274129369	2.3856499614304	0.0170489698700015	0.165399527371571	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33019848002871	3.82024390243511
Merged-chr11-4976584-1	2.49752875646966	0	1.41755544996512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120620452-1	2.56710871353689	0.80032699467107	1.05701410981762	0.75715828884173	0.448955036260489	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850037882615877	1.59982791176663
Merged-chr10-94338091-1	2.57247870392427	-2.95089576758509	1.17813925914728	-2.50470879794033	0.0122552246320122	0.129521253243323	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57686714427562	0.729295484888209
Merged-chr6-72869872-2	3.38860041920533	-2.85099197161253	1.15454786126611	-2.46935797749089	0.0135355736107051	0.139049770973925	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49905999866396	0
Merged-chr6-31813977-1	2.32882372651722	0	1.52101013863926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32343880-1	1.91855283069403	0	1.38634470365143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141635581-1	1.92862495302262	-0.872541730462293	1.41435627186608	-0.616917920766227	0.537288865788263	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0
Merged-chr12-54710715-2	4.90658690275438	-0.587410966805298	0.834739589578364	-0.703705651605677	0.481616100037325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00145100064929	2.59767077172848
Merged-chr1-153543214-1	1.61283619335381	0	1.40698623100201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-85695690-1	1.14473853627735	0	1.81087655106409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38187989-1	4.21801011448952	-0.910174118790645	1.37425921955511	-0.662301628280359	0.507777933518243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	0
Merged-chr1-162631275-1	1.0467463201866	2.07036916447955	1.68861458644532	1.22607561316751	0.220170221998895	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr3-58449691-1	2.80943236919878	0	1.41005678092674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75109125-1	2.04161198045066	0	1.40996148810985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73667167-2	2.56457842589928	0	1.35702877591551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91064809-1	1.32877860803959	0	1.48122066676086	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10888083-1	1.98724704641152	0	1.39722738632382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106574507-1	2.55874198342338	0	1.36664860587011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145275657-2	5.28743192005352	-2.30227278985556	0.910112793557857	-2.52965655043196	0.0114174226859262	0.122610173021288	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63151156824312	0.73596151290311
Merged-chr4-139197675-2	8.51147118980684	0.0439537518370801	0.660919513329315	0.0665039402690164	0.946976620775667	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8800382917006	2.69347364329618
Merged-chr4-55765531-1	2.74442535192634	0	1.35555046291876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49055904-1	2.87803159130335	0	1.35942379280195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16253568-1	1.57519479451306	0	1.47013545216684	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79552972-2	3.39849811551916	0	1.34174319879166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-42188228-1	1.94499912117341	0	1.35285316540538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31851257-1	3.41940162199972	-0.640554811859785	0.883361323485811	-0.725133413507519	0.468370187557268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1746641591527	1.46928333126936
Merged-chr10-24059108-1	2.2229300187143	0	1.36856163463827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60928566-1	2.17666158624691	0	1.44743967278608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99705773-3	4.37352846341965	0	1.33353381264235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55204838-1	1.788299499712	0	1.50119757811218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89267804-1	1.27406971710344	0	1.55734021634093	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45588726-2	4.1395205889833	-1.2277275484075	0.981580211010008	-1.25076640160076	0.211019716319011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08056060172409	0.963545719069792
Merged-chr3-149441439-1	1.59403404993083	0	1.40664216201648	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28316075-1	1.65713904415035	0	1.40102287647305	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82276370-1	1.46395119809158	0	1.42094875614944	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-117769577-3	5.72025203389163	0.963608691336114	0.581925174672803	1.6558979285918	0.0977424911867211	0.609978113751072	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92413571494397	3.85374986918418
Merged-chr14-75064775-3	4.58638759621508	0	1.33226209007369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65401770-3	5.12229808603554	0	1.34551608835377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128837728-3	5.38131027266897	0	1.29947510643865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32786217-4	6.21918191826734	0	1.30239722078908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106561285-3	3.92983002151069	0	1.33460739779363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5175491-2	3.69688145163097	-4.21121277984393	1.27773495069907	-3.2958422069772	0.000981271133230765	0.0187784939204791	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18521168297967	0.306240821987646
Merged-chr10-45051305-4	4.02677686357776	0	1.3107628597345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130933048-1	5.71063963128766	0.0179361160952025	0.536478312620149	0.0334330683520138	0.973329239663758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6127263832395	3.60233872278206
Merged-chr8-122913382-3	6.8096020368895	1.51446430333119	0.738456352138764	2.05085148085585	0.0402814123588859	0.317863684579611	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17435924253564	2.2472067585338
Merged-chr1-89943412-2	3.79674590886109	0	1.31263543916484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58074991-3	4.08982393988801	0	1.35733828776161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4528166-3	4.20919450059808	0	1.30082506564788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78239685-3	4.17762027423751	0	1.32285381051654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39356914-1	5.78918891415989	-0.96231011091314	0.867799073523891	-1.10890889408935	0.267469486575869	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32811970490828	1.29948469469889
Merged-chr2-93646086-3	6.82814784492748	-0.578373477000079	0.640752961411919	-0.902646592105661	0.366713490162839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85863208023282	2.09032553771468
Merged-chr4-141652013-4	13.8806825387036	0.633167077935324	0.545837253288814	1.15999242287023	0.246051891089897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.97107816260891	4.46373146916575
Merged-chr2-153704426-3	2.77659291834502	0	1.38712441311645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21908674-2	4.50971182801059	0	1.32092398963045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127971072-2	6.41308810983309	-0.292956017393591	0.811288377493125	-0.361099734102961	0.718024892016609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.82393566206134	3.3040854270693
Merged-chr7-89243990-2	5.45096789635037	0	1.33343466618667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162313835-2	6.93638051655268	-0.822163527075997	0.584370512480401	-1.40692165247399	0.159450622239362	0.865835163773755	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6271167032907	2.39582461268914
Merged-chr7-125565808-3	9.32237534674426	-0.403116134606536	0.685369470649152	-0.588173462446062	0.556415867884823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34586542325187	2.59202657767585
Merged-chr8-126567085-3	8.25209795629626	-1.90391428077151	0.743292440761498	-2.56146057239726	0.0104233071636675	0.114551199111507	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80994006734898	0.926147595614233
Merged-chr3-9067267-2	3.36862334612355	0	1.31895767830147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64969557-1	2.87353577665535	-1.89288597660654	1.00666050528976	-1.88036181677922	0.0600587837194953	0.424052002261928	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1094484979397	1.20539659680455
Merged-chr4-3784771-1	4.37023972615736	-1.39515431727501	0.843159437307499	-1.65467437775496	0.0979905671651315	0.611292754364934	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82891444285311	0.898163539755574
Merged-chr9-72030716-3	6.6759404150053	1.51153864774817	0.778178500423133	1.94240607640313	0.0520879602800932	0.38187881843828	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46313491983884	2.38409874358372
Merged-chr1-36914042-1	2.09275107401866	0	1.34116500523978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54257185-2	3.2774729957199	0	1.31973611368609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79339239-2	3.33373328358297	0	1.33996770388404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53415545-2	2.46855128610796	0	1.3585338773744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47455046-2	7.37587337662416	-4.19965231759399	0.997680516642472	-4.20941598792289	2.56031619787079e-05	0.0010717900209229	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.3193545730753	0.727201944460961
Merged-chr10-57721710-2	3.26337901464363	0	1.37419466018898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136652796-2	7.50565289597935	2.82314376861022	0.801510736304906	3.52227816888064	0.000427854946833521	0.00977573753698715	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49922338476114	4.40372984641911
Merged-chr18-21593964-2	1.81746613021274	0	1.4836467554868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157408480-1	4.64754377645887	-1.77732182707946	0.903754798433891	-1.96659738920265	0.0492296447067748	0.366538632215794	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3877179490295	1.65199033198162
Merged-chr3-37693114-1	1.52478857177688	0	1.40436115939785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57820243-1	3.5805569709986	2.8796874468645	0.971843780304836	2.96311763806446	0.00304540157421179	0.044810810913858	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	2.18395292683035
Merged-chr2-126594018-2	10.1192726188006	0.609484723605559	0.544853004305351	1.11862230507953	0.263301303639228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84660316419218	3.70246904678033
Merged-chr6-119500105-2	2.38358244015646	0	1.38138121635974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86769196-4	4.27864244048603	0	1.32568932253871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103402401-2	3.67596184836043	3.4000974662133	1.12434142110714	3.02407916526391	0.00249391170136121	0.0384810281079456	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.58492111464609
Merged-chr12-35329928-6	13.0903399858685	1.0786141167436	0.518303875597444	2.08104582567571	0.0374297117636382	0.300994578501933	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59720434607857	3.34032013840784
Merged-chr4-99484367-3	3.87841790276937	0	1.32951943755245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11324258-3	5.11956785982814	2.26351137051026	0.942649108324655	2.40122369025855	0.0163403443285042	0.159944220406098	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785754803793435	2.4360226934973
Merged-chr17-63198877-4	5.62812352494554	0	1.31475188039835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45278344-2	3.83363950087339	0	1.32505911343787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160010542-1	3.12737019041671	0	1.36720059587966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23074912-1	4.46180505854764	-0.549293447592	0.896488394570912	-0.612716741140759	0.540063651057556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58822220379215	1.486851288245
Merged-chr6-29912885-3	3.81340552942207	0	1.33543484558623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45115149-2	4.1104638739896	0	1.33127359650916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-78805241-3	4.24136718349745	0	1.32167851980466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97965580-2	3.06813653508893	0	1.32429861481677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130473125-2	8.87796067724065	0.147533659760237	0.458751338576897	0.321598319948024	0.747757016764573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71423764964504	3.91287286455926
Merged-chr4-108339546-1	3.65713294034706	0	1.31601226591174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25264423-2	2.98536362225162	0	1.33330862197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10466651-3	6.48926672064469	2.61368320287942	0.968280422573609	2.69930398461684	0.0069484675057111	0.0837275599535676	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	2.311378010734
Merged-chr10-20040335-3	4.72831701642262	0	1.3073171882842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103348745-3	4.13969430714842	0	1.30106071009378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28601255-3	9.02834327759948	-0.526436880860378	0.48684627606882	-1.08132054559653	0.279554551288333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56461606124921	3.16823365037562
Merged-chr5-44255994-3	8.15118962819977	-0.331133109660767	0.654301347239432	-0.50608654721231	0.612795894092422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41718399552702	2.63486423736552
Merged-chr15-81989921-6	14.1304196665355	1.58173534356774	0.419171654601626	3.773478779406	0.000160986918456719	0.00461903849600602	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27273200212888	4.75469103636898
Merged-chr15-38323402-1	1.66357187324744	0	1.44619450176815	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54527861-1	3.93266691995213	-2.54235817672942	1.11654648096155	-2.27698373518672	0.0227871969068171	0.20759126851706	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19197720480268	0
Merged-chr8-95099182-1	3.53725822584939	0.445167679079753	0.823363326097355	0.540669792993811	0.588735202627156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60761975824888	2.08628700317133
Merged-chr6-4797026-1	4.265757803261	0.344895190486228	1.10216216601184	0.312925993217701	0.754336888891297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	1.03300427768847
Merged-chr13-70043045-2	4.2889896143835	0	1.32837112971014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82815873-2	2.77367194415997	0	1.34250153013097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140611804-1	2.19684166729518	0	1.35334088068413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7845035-1	3.39059552903171	-0.402961225753415	1.1716558876938	-0.343924551556321	0.730903027439452	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02591514145915	0.733321818366247
Merged-chr1-39906226-1	2.42102024370114	0	1.35276279221548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24457499-1	4.63176000642112	-1.41446264221269	0.81749198564943	-1.73024649420755	0.0835862446679191	0.541921494599647	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11048848118795	1.46928333126936
Merged-chr1-128618093-1	2.55086784537344	-1.12091168885304	1.19016497164519	-0.941812030733508	0.346288884585801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49178126060026	1.41959898789419
Merged-chr12-100492805-1	1.01985240681293	0	1.6694966212939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48779629-1	2.22626409249956	0	1.4582785461295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62336802-2	2.73361741874842	0	1.35706084696432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104936915-1	0.984355592377556	0	1.50925553936528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191488631-1	3.13246894638034	-1.76917836504925	1.35732115368027	-1.30343387064459	0.192426679310013	0.990775906496424	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776169176876646	0
Merged-chr8-121851893-1	3.71561118841033	-1.33275382894397	1.16929332550429	-1.13979426707939	0.254372022717044	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89252416581712	0.733321818366247
Merged-chr2-52606193-2	2.96895315059377	0	1.37458795779361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86568629-1	2.7034920073805	0	1.34552999396625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7145935-1	2.12931498326594	0	1.55888736228736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19498479-1	2.70265354127185	0	1.35038747768464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110919431-2	2.14359294553654	0	1.39583053455102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98580513-1	2.17384099108577	0	1.40745119508879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45770193-1	3.13523411518295	-1.61944369050613	1.19287773848773	-1.35759402515062	0.174592539898688	0.924248550892714	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55350241583775	0.82780788634396
Merged-chr1-133135043-1	4.15161355932818	0.135233479373045	0.956299174183766	0.141413359985876	0.887543400587938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56576053967173	1.41695929335733
Merged-chr1-174239954-3	5.57035354257556	1.31004212515484	0.561495025601265	2.33313220139752	0.0196412078513924	0.184752320175196	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21709235222005	4.50695243859919
Merged-chr2-43794126-1	2.70272526978686	0	1.38883403423088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16326853-1	1.66724081950736	0	1.45526239689912	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85462966-1	2.88259988060315	0	1.38115239615686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33992538-1	4.35835734666208	2.63199910398306	0.803918808136542	3.27396134702204	0.00106051116812699	0.0198966875660139	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26385474378306	4.02459586351641
Merged-chr4-141680179-1	6.62701621819779	0.730807069387199	0.680682292134536	1.07363902048264	0.282984501726787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28284648389585	4.00242619524776
Merged-chr1-194999675-1	1.96428324027965	0	1.39721783890171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89200923-1	2.30093216349145	0	1.36002639976623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44046697-1	1.68488064133413	0	1.48310592678036	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17568626-1	3.51739969503467	3.70921785261709	1.27000225461133	2.92063879347384	0.00349314563793482	0.0496008463399585	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656505258713436	3.12575163045538
Merged-chr18-47998129-1	1.55879102333868	0	1.45952764580468	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-14408320-1	2.80185379758624	2.29543713126006	1.34842225694138	1.70231329202975	0.0886966544087724	0.566123420491858	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	1.99186294665078
Merged-chr15-84975872-1	1.48116632548628	0	1.6179278389112	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41199089-1	1.4155955713839	1.27043304140249	1.41679332309561	0.896696095819163	0.369881104495667	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr17-42898214-1	4.17641671978289	-0.780793863977441	1.14597526026452	-0.681335706843454	0.495659094504824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40420540130137	0.733321818366247
Merged-chr16-16473567-1	2.37963472356002	0	1.38081034196314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99113871-2	2.50976358938679	0	1.34789487484003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128941399-1	2.34080912470409	0	1.36435205930578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99229719-1	1.04619791261149	0	1.65241987880893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73419463-2	3.66136690518749	0	1.31082009094359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105507509-1	1.26526318017065	0	1.68986572872894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56479562-2	3.30961024837162	0	1.31531782967265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104410435-2	8.36648718739225	0.619371397576051	0.635466684143545	0.974671706685635	0.329723131801055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39300625485287	2.35651348678689
Merged-chr19-29370701-1	1.86811360474294	0	1.37259827120596	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10701329-1	2.53130252000959	0	1.43708310542891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80417840-1	1.57492029701407	0	1.55301970295669	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45652238-1	4.87382435077074	4.34504012038955	1.09868657904371	3.95475853010916	7.66119888660227e-05	0.0025699625382131	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.68622000886725
Merged-chr19-42100479-2	6.15906296860935	1.3989415032226	0.574166495409494	2.43647359155793	0.014831252373511	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60422182866215	4.31049639136878
Merged-chr7-82816440-3	8.45306520243491	-0.123380637159034	0.69080456619667	-0.178604258275715	0.858248450636012	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01595142515685	2.80505986605703
Merged-chr11-120612856-3	4.64166479750819	0	1.32271462380478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9575771-2	3.8559328753045	2.49306023854141	1.22366649006945	2.03736905339291	0.0416130726409734	0.324763865376453	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr11-11667708-4	5.21756074211943	0	1.34175521461204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90632208-3	9.53319712193935	0.861681458035043	0.60198816135582	1.43139269731539	0.152317700163264	0.838600761215657	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1223096545862	3.22636190170969
Merged-chr19-9916135-5	9.617365567824	1.57543324908589	0.52619260086188	2.9940239496059	0.00275324331912907	0.0415568395360883	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92482939956895	3.45339834539575
Merged-chr15-5457653-2	3.21784418223836	0	1.39139369979213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84387432-1	2.10503349660622	0	1.35834446495705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66175875-4	4.62594670284314	0	1.32206820128364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101239619-4	8.52471569670297	0.697426329525248	0.624068031106272	1.11754856003269	0.263759848900347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2079919354321	2.32275364653448
Merged-chr14-41033560-2	2.78581835781111	0	1.36243756818958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80953110-3	5.26547330978795	0	1.33467066817382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5705171-3	3.53321080191372	0	1.34364360271844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105296335-1	2.97988787561321	0	1.32234997590414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17411224-1	4.93276722621003	-2.63974972369788	1.11996351347973	-2.3569961806132	0.0184234363486852	0.175828519299136	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42987342172154	0.733321818366247
Merged-chr14-17873803-3	3.94774902256447	0	1.34715008645205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114965094-3	11.9237001732691	1.01823824494535	0.486845105866382	2.09150350424764	0.0364829526297478	0.295413570292592	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71203200762077	4.70437415491731
Merged-chr3-81061447-4	8.03605934957466	-2.52740483886874	0.868500519084982	-2.91007867390974	0.00361337786509957	0.0507967334436695	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57520915248892	1.03956264035389
Merged-chr17-17392025-4	8.63269255539342	3.45068101521188	0.907418378955913	3.80274534353413	0.00014310143307393	0.00420463410325945	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	2.42084011709702
Merged-chr11-44410677-4	3.89776773099903	0	1.35972816302561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32707558-1	2.25067307753633	0	1.3712994652992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79293594-1	5.39721411860106	2.11121466282738	0.977226670841377	2.16041449320008	0.0307405964711793	0.261559247005949	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883077698702854	1.6950503635711
Merged-chr5-64615030-1	4.15183407137398	1.63914928607598	0.883705522007276	1.85485916434331	0.0636163406644487	0.443043098908565	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911512212923865	1.58115091314687
Merged-chr18-36707725-2	2.73043897104306	0	1.34338279710075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83330475-2	2.84009173371701	0	1.34935765465347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116146385-2	9.57710742446045	0.518015358365373	0.522196889328124	0.991992424604193	0.321201220805807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52094016780873	3.97010300994756
Merged-chr7-66661773-2	3.91306433091518	0	1.36202076209406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98542780-2	3.52200806701146	0	1.3506281264311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137938703-1	2.42826732923209	0	1.36388527305043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189927840-1	4.25303261767544	1.90999550020839	0.838919804846395	2.27673192261579	0.0228022390065177	0.207699346267062	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45850082230453	2.63394510410042
Merged-chr1-193839030-2	2.97249514495523	1.86796606210886	1.34727096806787	1.38648134368079	0.165599973151974	0.888302072368158	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr12-85758999-1	1.93207114246736	0	1.40670471286056	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58232835-2	2.48633201467047	0	1.39800090798044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155168086-1	3.05428303640138	0.412331987347514	0.771890231459488	0.534184746149564	0.593213721608857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27740086581985	2.31711242604998
Merged-chrX-48425481-3	5.17648240237263	0	1.30376610988237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90262731-3	4.89882495872669	0	1.31476400292401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157764009-2	3.66204975305608	0	1.32654331134224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-51090775-2	3.2263765686858	0	1.36059233389502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135811511-2	4.07033303433084	0	1.3099611271295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61650487-4	5.88954466547103	0	1.30077123956319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97386310-1	3.54914477474419	-1.91481960382676	0.978778926475734	-1.95633513557694	0.0504256877684707	0.372969018504771	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93464547132778	1.03956264035389
Merged-chr9-69518447-1	1.73611658704511	0	1.40362852584018	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120577095-2	5.16037035538696	-3.06401126311004	1.0558513112872	-2.90193442045799	0.00370866168886013	0.051916496726704	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91915960483828	0.469435083901436
Merged-chr17-27037787-2	5.95455126964011	3.04557150378119	1.06873982300695	2.84968468304318	0.00437625905756529	0.0587450748512041	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.40000983364339
Merged-chr5-113667565-2	2.34454531359288	0	1.40103149715424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104173144-2	8.03605252018246	-0.0495086860501616	0.544400566965539	-0.0909416504213443	0.927538955041011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32919841093223	2.85971213640217
Merged-chr10-77509818-3	3.82542666249811	0	1.32364316923173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114982768-5	9.54743963188918	-1.31879175854206	0.592898110107474	-2.22431432325363	0.026127303692503	0.230065326383277	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50939410542118	2.00098049458557
Merged-chr8-68092862-2	4.75296907964793	-0.00911492418297942	0.897325013257762	-0.0101578848781752	0.99189531986256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31752018117671	1.15307255889252
Merged-chr10-39771862-2	3.41516630829054	0	1.35278858199665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99469260-4	7.44940887441316	-1.4020278839934	0.696056679802724	-2.01424384633556	0.0439839383277461	0.338696020971588	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12141173368431	1.35032549026822
Merged-chr14-61804005-2	9.90663572572928	-0.300651834341747	0.599336877480687	-0.501640806094791	0.615920209895645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30408106977355	3.31390960203194
Merged-chr15-78754338-3	9.56804014561942	1.11643406202903	0.484787601721	2.30293443575223	0.0212825322959361	0.196541599125246	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55113443128929	3.91189992775539
Merged-chr3-96066274-4	9.49072709386416	-1.22443231324695	0.656910338241165	-1.86392608240157	0.0623320853712896	0.436029440424775	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02192137587173	2.43067782037622
Merged-chr6-47779544-1	1.67965797282366	0	1.58515262116111	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112501316-1	2.34466315198566	0	1.35108081856239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4981469-1	1.91293548288538	0	1.42289496734202	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76035036-1	6.55118874889896	1.78159846264133	0.867607907138565	2.0534603799511	0.0400279485149246	0.316436767923574	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59117843231626	3.69807084469279
Merged-chr14-16373979-1	2.09355876840833	0	1.39788276247077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23350661-1	2.95437944398208	0	1.43264993279876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43398386-2	2.04840218236075	0	1.45752695175615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53883394-1	1.73137163165942	0	1.37779903153486	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87213278-1	3.31543828398842	0.171511003554056	0.908179691326411	0.18885139713217	0.850209287475856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35123568318153	2.73752739441368
Merged-chr2-71660850-3	3.1640371286126	0	1.32379402717983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40446014-1	1.15632417709732	0	1.57886702345567	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60871091-1	1.80840661487852	0	1.45808476612449	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124278394-1	2.31808094146769	0	1.3808585830449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73442236-1	1.78191566964794	0	1.4307343119869	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-59984132-1	3.36247271904895	0	1.36070145314687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128553557-1	1.86357873126462	2.44870356676599	1.3358046019086	1.8331300575453	0.0667832321202514	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr3-116082672-1	2.25008772092139	-0.888733880599201	1.2396401902916	-0.716928902079356	0.473417967405701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974378703053907	0.382164212378408
Merged-chr3-109360959-1	2.01728839126109	0	1.41066601708097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90115279-1	2.3556907947975	0	1.35698511483052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50684862-1	1.9700971438833	0	1.53707752497716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20767385-1	2.32731373720448	0	1.43676460399628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107448144-1	2.00437133948019	0	1.43945819262918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153048311-1	2.74715108446684	0	1.41168823085836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-48624653-1	4.00097160292017	3.63293313936322	1.2893688799633	2.81760572619576	0.0048383182445082	0.0634948132563933	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	3.01972438135018
Merged-chr6-72936029-2	6.04727427193714	2.69238738878079	1.01882818927187	2.64263142415108	0.00822645320857602	0.0950770801852862	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46960599311243	3.22584882463049
Merged-chr12-12244052-1	5.17837612289356	1.23078811640992	0.906775392523499	1.35732412520008	0.174678245005762	0.924402704741375	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92314589045896	2.47008794786848
Merged-chr9-50907146-1	1.76680307130623	0	1.51734543773448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-87885487-1	2.33117844737833	-0.963615330553725	1.79060757204808	-0.538149924972979	0.590473547589041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98183794677996	1.49176722630688
Merged-chr12-117403847-2	3.56340985806873	0	1.33953789592067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116311630-1	2.61362123336213	0	1.36815727816172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-13498898-1	1.2996775216911	0	1.4358568382537	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150497887-1	2.2083765009465	0	1.42443110819868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80356844-1	4.07117319376191	0.43992327411596	0.82433586280691	0.533669944454432	0.593569906945148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90353387564711	2.24434414282593
Merged-chr18-84199397-1	1.73767567293682	0	1.43673441542643	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81303955-1	2.70729976957539	0	1.34517505797115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47011005-1	1.65532572032316	-1.39544388387206	1.64425821384387	-0.848676851435553	0.396061130464874	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18548116023368	0.563523181795778
Merged-chr9-117927208-2	2.53365038071374	0	1.3618157739425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-151742499-2	8.44798336841271	-1.67298919183384	0.700951934743718	-2.38673881747045	0.0169985628744196	0.165050236194922	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81035133299677	1.64054795287913
Merged-chr15-30605961-3	6.08849517077824	-1.15031698037389	0.667813930841372	-1.72251120746255	0.0849769543378836	0.548326657269018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08970214717144	1.44027592657175
Merged-chr5-44457919-1	1.89753186157938	1.80953175202794	1.45687267644697	1.24206581761217	0.214212279128266	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.03956264035389
Merged-chr9-109908278-3	3.65379529104552	0	1.32332146220932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69132146-1	3.28172454897269	1.96070898800808	1.33789016763542	1.46552313144915	0.142778246123609	0.799896028051555	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr16-33261764-1	1.94582378153908	0	1.3675838385081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133679681-1	1.90964833936973	0	1.35665200652784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40866600-1	1.78953058569794	0	1.37203728014685	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160213273-1	2.28250627359691	0	1.34272526880068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139288579-3	4.1891178808996	0	1.32185942254417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78942924-7	16.3710998879345	0.979744327013717	0.529159395087683	1.85151078504686	0.0640961046206188	0.445008930359005	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38488203889619	4.32746081551923
Merged-chr7-25205998-3	4.34971954273187	0	1.2987264187879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85064979-2	4.15728654169686	0	1.34728588253786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43460732-4	11.5039881177158	-0.720677654853541	0.46074789710798	-1.56414746410583	0.117782941543965	0.700650350307867	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23347862270536	2.93621765520635
Merged-chr17-29514594-3	4.24637222574647	0	1.31321953937451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83159610-2	4.17761211983328	4.0162113859188	1.08810806842373	3.69100414055086	0.00022337050100207	0.00594799052912846	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.33578942466974
Merged-chr14-103343463-3	3.96270626372519	0	1.33049214768991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88244472-6	13.0479476833757	-0.171537527144003	0.383743259342403	-0.447011179917417	0.654866987737091	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04110887925065	3.82997882121795
Merged-chr3-105824406-2	7.0769790379348	1.84916468115362	0.600651403030349	3.07859878762355	0.00207976563423105	0.0333612970930439	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63924154107617	3.13387427998699
Merged-chr2-168117361-2	3.94798259477111	0	1.31265262256381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8983313-2	8.48574427161109	0.374888929808035	0.500527092154179	0.748988287915805	0.453864264640916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1129905280902	3.63175124708093
Merged-chr19-37610243-2	4.24120235913829	1.08068095569679	0.914891936530935	1.18121158635903	0.237518679643469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8428110171315	3.87110181758271
Merged-chr13-111824358-4	8.77501518430346	0.476798920874996	0.580130547768257	0.821882113791845	0.411143993608949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93401029659059	3.40594141276558
Merged-chr5-77289867-3	4.85515316090565	0	1.33996421077858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34216759-3	3.99156997148154	0	1.31114167355968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151062119-1	2.39218033341487	0	1.34959491662226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139287647-1	3.57367891074827	0	1.34115644182186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45029653-3	4.2834815142632	0	1.37042208648458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-48812200-1	3.8043038677742	0	1.33428908776467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86339625-1	2.9302123238918	0	1.32140798961946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113007162-2	2.96857153732631	0	1.32715056407141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125587277-1	2.40005843901111	0	1.38120932994744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-161537486-1	2.56067903526881	0	1.34357516985679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47737389-2	4.60793407078867	-0.817217532867405	0.810177018508853	-1.00869009389023	0.313123284084089	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92733790400108	1.56706844884727
Merged-chr3-146914996-1	2.89449591643926	0	1.36547317945976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119430525-3	2.88056463408676	0	1.38180188531006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99947601-1	3.26915798637166	-1.48133794648879	1.24975560161471	-1.18530210592765	0.235898021156325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	0
Merged-chr13-110953468-2	2.9164616012327	0	1.33351331402251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94190346-1	4.37890137422778	0.725276881244721	0.924751125329026	0.784294132095993	0.432867541798462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67683566621493	3.26008002381647
Merged-chr2-148575660-2	3.80018229461222	0	1.33124983490235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142901584-3	6.19948700344626	0	1.33538881858912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69421772-3	3.54960069303897	0	1.32869549021099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22952877-2	3.2527487281474	0	1.35832582763966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-13739020-2	6.58435475819192	5.0712566372565	1.01769339814613	4.98308886202319	6.25771944330784e-07	5.55593661334775e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.06764662187442
Merged-chr11-3998150-2	3.76109344955038	0	1.32091420640667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44465605-2	3.4320806341969	0	1.35656800350648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68090361-2	5.32969801162712	0.453026034722398	0.93829818663863	0.482816700675213	0.629225891589918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61599525206877	2.63456068607048
Merged-chr2-145744333-3	2.84622115931992	0	1.38087998292346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125282522-3	5.45106059493642	0.380403235198488	0.891754041468566	0.426578650063675	0.669686250959643	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52797820328297	1.69453213775868
Merged-chr8-115626596-3	4.43339064719874	0	1.31933195998983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134083115-2	3.92267183663838	0	1.33657184479939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20256337-2	4.31009380442098	0	1.31114650528157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42860576-4	7.97205786287462	-0.395966228826762	0.603977453327132	-0.655597699294075	0.51208300623316	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27600751242427	2.80825258413206
Merged-chrX-94142580-2	3.82345646094848	0	1.32341286253757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20220575-4	9.8488214615333	-0.270141594584879	0.722405029306252	-0.373947555216087	0.70844333489376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08971149569258	2.33215491628936
Merged-chr18-35745890-4	6.01543827223508	0.244754373543526	1.28396120455007	0.190624430610653	0.848819848303761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.306240821987646
Merged-chr2-16228293-2	3.98906576087828	0	1.32923717617165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23283196-2	3.23006313391795	0	1.33255968465816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44657662-4	6.08229893560571	0	1.29564469882161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73762526-2	3.51214176718304	0	1.32480215770488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108709717-4	5.05894073843234	0	1.29435195407297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-98348825-1	1.5984216035859	0	1.42671281748913	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88230289-1	1.70106125466211	0	1.43367681417754	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164952904-1	3.20025935226954	0	1.34328724283238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103557458-2	2.48475707975008	0	1.39544669359458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125566292-1	3.32390460836345	-0.84405252721629	1.09104581922418	-0.773617855771152	0.43915680970306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54480481512711	1.54311005189624
Merged-chr1-177742284-1	1.27600641782743	0	1.51410777514842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58188079-2	3.34431428683758	-4.36371251194562	1.11428021581024	-3.91617157877346	8.99662309483407e-05	0.00291036303344073	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08346956629305	0
Merged-chr14-70432527-1	2.3865038304919	0	1.38863411251308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132589752-1	1.73658135611215	0	1.38677132757647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124331264-1	3.56034222429174	-0.214781551907688	1.20131735205277	-0.178788353918868	0.858103890168056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92881075868472	2.03415454436003
Merged-chr6-97284557-1	3.90289412325773	2.61668562009901	0.936892765173182	2.79294036347407	0.0052231320382351	0.0674260739175249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	2.58701083057496
Merged-chr4-99019700-1	1.82870716510752	0	1.39397579653373	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127709765-1	2.46823625188795	1.50549902155557	1.83503576376557	0.820419444287138	0.411977034550439	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36910874782637	2.8343012990665
Merged-chr13-52825102-1	2.07981776689632	0	1.41836857532545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8807756-1	1.72410394193553	0	1.4171120366522	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62243072-1	2.72830847819557	0	1.33940942373326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122280322-1	1.79427182862082	0	1.42247295390549	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144701951-1	2.26306282645798	0	1.35230089902241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99217521-1	2.37379008590571	0	1.37140131665123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13278277-1	1.85042890910496	0	1.37468841065275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-163294073-1	3.12838337210466	0	1.3144795122557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145131472-2	3.18556543165455	0	1.35749698814074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40015465-2	6.85786608815395	0.259381612470574	0.731374389326706	0.354649569708555	0.722852135612104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35710017652296	3.44005968409874
Merged-chr5-123372339-1	2.41278995409989	0	1.37204951809704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130544718-1	3.36333992846225	2.2562720482778	1.08056757296963	2.08804345486427	0.036793914987805	0.297418996634476	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16202697745482	2.60416142635113
Merged-chr2-73372184-1	2.56275671752818	0	1.35446926607056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-102716057-1	1.47220180285814	0	1.44394211167662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50452158-1	3.13190800575573	0	1.36312098515237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40767294-1	2.64482246193312	-1.11511658416841	0.876737713282062	-1.2718930271563	0.20341112966476	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49494557806921	1.51621292071001
Merged-chr3-28103773-1	2.14755453231327	0	1.39995774447633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67463214-2	6.32186915121294	-0.44376002011089	0.698479124498261	-0.635323239516509	0.525217619789192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86575896966159	2.47008794786848
Merged-chr1-136255350-1	1.56060859739279	0	1.44445841719255	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106146499-2	2.56037386111687	0	1.3785518295166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57653109-1	3.0206339556926	-1.3948040448618	1.04371486610972	-1.33638418896985	0.181423731533979	0.950021248563137	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98729389242269	1.61477032079243
Merged-chr9-111677312-1	2.92550938114324	-2.13555687100836	1.2623724421265	-1.69170111746971	0.090702975269415	0.575891626695996	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03102469712402	0.469435083901436
Merged-chr2-122666491-1	7.41828964763048	0.570925622881715	0.758015653083175	0.753184476546778	0.451339066338484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45443911247074	2.62425180415541
Merged-chr2-45238583-2	3.61487288833409	0	1.3177386673095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181077555-1	1.04929579567381	0	1.45981921331726	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62971370-3	4.22292108806758	0	1.35907343028885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99224916-1	3.69605917285434	0	1.39515479426065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65432463-2	2.50844605346298	0	1.37398270982456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22701728-3	4.78491111694097	0	1.30921600458163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9924734-2	5.86748944865716	2.27232017209774	1.15286985824059	1.97101186734602	0.0487225184215567	0.364031750374462	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.989878296978726
Merged-chr2-69707200-2	5.29241711969784	0.85279156468435	1.26954787869408	0.671728557068342	0.501756517904996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.688405034366054
Merged-chr2-164470423-4	6.85115894794755	-0.0942301211805838	0.593126975081895	-0.158870065161971	0.873771245658822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83891014741151	2.315908400302
Merged-chr13-107825867-4	8.28959343646271	0.478062185316813	0.870852672773757	0.548958739248207	0.583033765944595	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75893524070593	1.54311005189624
Merged-chr9-100520748-2	3.27362475654353	0	1.3509046662321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17628411-3	5.03085567419238	0	1.33458950278098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67457756-3	5.69550085265264	1.47781247643788	0.949760850874477	1.55598377747115	0.119711950002232	0.709284348975053	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	1.65215194967867
Merged-chr16-39193467-4	8.81200889599294	0.623943824325505	0.524567960217938	1.1894432592991	0.23426528645858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72250482516096	3.94646460166749
Merged-chr3-79060222-2	8.3213635139227	-1.40132746053987	0.599741424569764	-2.33655272611049	0.0194624529868708	0.183467030132726	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12955900625259	1.85419949900662
Merged-chr12-85395887-3	3.62315193618275	0	1.31569258496442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121469553-3	5.48462174840013	1.41681125035293	0.553454138686385	2.55994336534497	0.0104689222431248	0.114917217016501	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79960810755828	4.25238463739553
Merged-chrX-47992847-1	3.12644018744659	0	1.35315453427434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24913191-2	3.69265609546013	0	1.3301057528391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119264011-2	4.595915300635	-4.98452726603327	1.14487059761238	-4.35379096679439	1.33803298211562e-05	0.000638678621251476	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78546741468889	0
Merged-chr17-24006398-1	9.63318299177773	0.262062247572252	0.494319196435953	0.530147826468654	0.596009441475014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81691391556234	4.03215378445536
Merged-chr8-127443763-1	3.57270771266309	0.345124852508055	0.905029202074726	0.381341123266383	0.702950142874303	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39603802479763	1.73830414206781
Merged-chr15-98417383-3	6.13543138877404	0	1.29841536416322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-46022760-3	3.6554268208785	0	1.30967581896932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79443638-4	4.67560451190476	0	1.30676080554773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95834728-1	2.04149007028535	1.51540508536905	1.23158214574032	1.23045392514855	0.218527170571148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	1.40590822918039
Merged-chr1-105978405-3	8.56374552021428	-1.69508827064923	0.649016069552361	-2.61178166484902	0.00900717571947332	0.102380049498122	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26896614310174	1.40264952818025
Merged-chr18-24050064-2	2.85955871149517	0	1.36238322703104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173186520-2	3.85669768036931	0	1.33750529880724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45039632-2	6.76581489093163	0	1.30816513274724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30806136-4	7.84065508373657	0.416105037844269	0.61628572085495	0.675182019903078	0.499560128547735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17958928869557	2.55996558715718
Merged-chr13-93778291-5	13.7557161976968	0.450417029574354	0.412857115629585	1.0909755761082	0.275283629769136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.32829721973424	4.67077172720535
Merged-chr7-102242249-2	7.74386197802988	-0.681778022055943	0.626878619370987	-1.08757580971583	0.276782414635523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38551600156552	2.31873226455329
Merged-chr11-117109341-2	2.54676911436117	0	1.3469634864804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68377930-2	5.61400486018478	2.65493037711454	0.765840702298571	3.46668748363219	0.000526914126083023	0.0114391131172828	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14855119822055	3.52133424668802
Merged-chr3-132070951-2	6.55576670158765	0.870070468148131	0.858692709137079	1.01325009388106	0.310940718577799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76254167165567	2.78734291970211
Merged-chr5-150116385-1	3.4441508382893	-0.0908335958962267	0.905207769635005	-0.100345576941802	0.920069974897096	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70508404210849	1.27911570690487
Merged-chr2-166675608-2	3.10259640877124	0	1.34377363573989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52190862-2	2.05691237568928	0	1.40798751657341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172399449-1	2.63851549664748	0	1.36346460851727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32502657-1	2.15578740158114	0	1.37178083273504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127889613-2	3.97909925763326	1.4101320395637	1.1706618186585	1.20455969186696	0.228373325316994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.825079211029734
Merged-chr13-41597681-1	2.96718363969949	0	1.38818760434456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41356953-2	3.4202132416204	0	1.32762485695002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58907339-2	4.13460776237632	0	1.30550294265165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77287027-1	2.62054911028063	0	1.39056076176357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150438822-3	8.04979312990839	0.303186640920784	0.693657617018658	0.437083992854978	0.662050435592093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78723170761803	2.36809407398891
Merged-chr12-82189989-3	4.75246189190825	0	1.31646509796116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26451354-3	7.76506455425382	-1.37894727646203	0.574089762309216	-2.40197155043379	0.0163069765999335	0.15973552584309	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68260590278137	2.08628700317133
Merged-chr14-61697267-3	12.3798113459718	1.02538838998754	0.544373077751523	1.8836133377918	0.0596172963920252	0.421755099061738	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22441867198496	3.57248311365864
Merged-chr1-33982168-2	3.61471830565839	0	1.34534305930303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91357714-6	11.7074398739218	-0.132674488154894	0.491712628913427	-0.269821193016893	0.787297817663774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65997540093381	3.2519504323942
Merged-chr17-49936005-3	6.27029897909864	-1.36151305387318	0.753665777325415	-1.80652100020366	0.0708369969066485	0.47998669879814	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83309256472541	0.793480537552656
Merged-chr8-30718210-2	8.88617432002251	0.582052580240432	0.528325946368131	1.10169221148731	0.270595504126339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98102543800532	3.51526178553468
Merged-chr15-59568007-2	3.09764196448861	0	1.33148452112647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46552665-2	6.07450274963379	0.285773242455445	0.726584064159515	0.393310638853629	0.694090061454657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24632048383769	3.46457184829104
Merged-chr3-115861006-2	5.62125676087585	-2.07817870582933	0.627491602347638	-3.31188289700488	0.000926703278610119	0.0179852546611395	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.04432011749556	1.85545068682378
Merged-chr10-61536576-2	2.67761606298439	0	1.3427537337505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114305629-2	2.38118096676065	0	1.46073138897435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47335037-1	5.28906009827997	0.571067900481669	0.659868868537793	0.865426341065462	0.386804828501825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71143652795493	2.21565186750098
Merged-chr13-37946963-3	4.24451475983525	0	1.3174104482419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119067808-1	2.50457296469237	0	1.35899855642424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134133048-1	4.3406665033359	0.590470722646248	0.94354080889967	0.625803057034531	0.531444126452902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23553092496926	2.03415454436003
Merged-chr18-84092704-1	2.52482358418155	0	1.33720318093196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-158209313-2	3.80871416190789	0	1.31614262138705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37502705-4	7.24147269421322	-1.04503531863727	0.658085405137402	-1.58799345871997	0.112287818283666	0.676584580319448	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13719374450179	1.91157833022862
Merged-chr6-39778093-1	2.62572686603801	0	1.32857059773909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172412485-3	8.5758019955817	-0.811035670939537	0.570866459339377	-1.42070997108166	0.15540109257925	0.850631579467557	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70110913951769	2.25530669400333
Merged-chr4-3774182-4	13.7211535656818	0.345970429904205	0.43050390504532	0.803640631013054	0.421604550436294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39112468546012	3.5379075462172
Merged-chr4-122859285-3	4.56594870983176	0	1.31712664402318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76329178-2	4.22914095441239	0	1.323953815359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56064320-2	3.75147155367711	0	1.33526680891325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20651237-2	2.47320308521823	0	1.38257013887425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47311666-3	4.35938501565866	0	1.32177353770132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116052878-1	4.1996179924246	2.77378876971033	1.12070856345389	2.47503129730877	0.0133224500549895	0.137417575442477	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	2.15554725514874
Merged-chr18-25505261-1	2.3017868038268	0	1.43229493277973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131029891-2	2.69880039924075	0	1.40465464199405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111157776-1	2.30568282779541	0	1.40747996625787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31890832-1	4.21372078387889	-1.80274120948802	0.736335060041087	-2.44826208518094	0.0143547197021193	0.145092577518127	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31710924156535	1.31470332505763
Merged-chr5-122343112-1	1.86337255347409	0	1.42327214386697	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169874124-1	1.40880040108455	0	1.54180391307882	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120472874-1	2.07616631759657	0	1.3823870177313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47287883-1	6.19983902628813	0.270209639381945	0.778301852109098	0.347178461222612	0.728457251122256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.735320214938	1.93167434475395
Merged-chr16-58453935-1	0.971152053498586	0	2.30460959176671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160617416-2	2.87271725864267	0	1.3278530480694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-77045505-1	2.67990892544348	0	1.36367722020481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17377262-1	2.32950485297572	-1.51700434903008	1.19742578646897	-1.26688799103241	0.205195343310334	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16357249386676	1.41695929335733
Merged-chr18-11695619-1	2.40182350575472	0	1.37637409761862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8363458-1	1.71700577182892	0	1.59575181109057	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101800478-1	2.54349026530566	0	1.36903503814607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-87938526-1	1.56185289699757	0	1.58351361443691	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8206420-1	2.55710027759759	0	1.43614376911086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-66890903-1	3.20727738501801	0	1.3093196644353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136547314-2	5.23045162920576	1.02478993783392	0.599661099551745	1.70894850207887	0.0874604890987039	0.559873934232358	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56931688006735	3.59267025540811
Merged-chr10-95678406-2	2.93563463809372	0	1.37233570245594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88047535-1	1.44931591206481	0	1.40494618124715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-63471732-1	3.27336409159165	1.33190820335723	1.08076069820526	1.23238030913692	0.217807052913255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67220781850767	2.79141544974979
Merged-chr2-45581173-1	1.80645711913174	0	1.40578910022561	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9758530-2	3.9923234935007	0.178358430299917	0.84495497639797	0.211086312622545	0.832819920547681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77142929362381	3.36985748385833
Merged-chr2-117303558-2	3.34180703241661	0	1.32688471822077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-82947148-3	6.4592154594029	-0.850724161447686	0.689482519356599	-1.23385892689716	0.217255476886778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89470693404541	1.99834080004871
Merged-chr6-143073549-1	2.40465652496308	0	1.3914355697481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117554379-1	2.51944869314529	0.0090179618449958	1.29529613806369	0.00696208502441501	0.994445104722936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	0.581381506691384
Merged-chr17-29495194-1	2.03517839578473	0	1.47495147318989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88845566-1	4.39048815544099	0.282412429123056	0.74107263268093	0.381086032149631	0.703139411546391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90189919342487	2.58347586254265
Merged-chr15-59517022-2	2.81195652823497	0	1.37712768631084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124623036-1	1.35448546714664	0	1.55980715119624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54649214-1	1.82491840737728	0	1.58135320433383	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107628520-1	4.14224838116762	2.19755654032375	1.12330749846276	1.95632677902631	0.0504266715405634	0.372969018504771	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42345010417536	3.33594757742411
Merged-chr5-21130536-1	1.44831174849294	0	1.4393680527984	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83764733-1	1.48920939826306	0	1.63748077491066	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14183346-1	1.9696858428312	-1.00056184930002	1.09634720465113	-0.91263228022587	0.361435971050731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37886272015276	1.40000983364339
Merged-chr1-24688366-1	1.52372169185814	0	1.50016584784352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55641648-1	2.08710191122637	-0.443382537164011	1.53873798166565	-0.288146872597541	0.773234314264188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr6-37355590-1	2.61268335391609	0	1.38296665988053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19724148-2	3.53125774955261	0	1.3249119135579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122312255-1	3.04408179631377	0	1.38513994640261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5054304-1	1.52348388070605	0	1.44302519608315	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99317604-2	3.92094672210225	-2.02006774404782	0.876505772943824	-2.30468276011832	0.0211843471175408	0.195745524143498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08475115079927	1.10669213789164
Merged-chr17-67583607-1	2.71746677734827	0	1.38989860892358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118295688-3	4.64389500378233	-3.26108869627185	1.02741360216488	-3.17407584384747	0.00150314407571599	0.025992181204482	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27532688506674	0.563523181795778
Merged-chr5-143817202-2	2.85723182084802	-1.26132956102714	1.25345037609203	-1.00628599670589	0.314278014617357	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784769569710081	0
Merged-chr4-54526291-1	3.91111946066514	1.15884210218703	0.865796104318121	1.33846998895855	0.180743277052897	0.947369068925851	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47011636758316	3.0560776536823
Merged-chr12-102065122-1	1.59823246404092	0	1.45515431680784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150031538-2	6.54020604627457	0.764723894845798	0.858912784434569	0.89033940197924	0.373283670076916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70356407631785	2.13882690918841
Merged-chr1-171871934-2	4.37431141481698	0.0328773578497049	1.02583853607971	0.032049252093168	0.974432773560028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.838977036854949	0.683637474991079
Merged-chr1-138239779-3	4.20652331079162	0	1.34833595921926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146095947-2	6.10585758173251	-2.80304426875509	0.841616811120277	-3.33054690890021	0.000866755581823985	0.0170087117867478	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.06675836997792	0.793480537552656
Merged-chr1-171619823-5	12.8960917822441	0.944230481785285	0.516236244714255	1.82906661718015	0.0673896291765467	0.462324693771194	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99440529073201	3.75604463995231
Merged-chr9-62373935-4	4.66099207358296	0	1.31270718485513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61314184-4	9.36750526435531	0.177033842738928	0.536517477154517	0.329968454481384	0.741423798079304	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65529518337549	3.14282195505218
Merged-chr14-65336987-2	4.96905720700104	2.96380417221193	0.903997918825237	3.27855198611901	0.00104341143508157	0.0196718879506176	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	3.00982473409987
Merged-chr15-68066827-3	4.88518968763006	0	1.34935445957674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70979797-2	3.96493641940757	0	1.31722831140117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32770090-1	2.32286666701479	2.45956176494966	1.26285136745121	1.94762568924778	0.0514597676062662	0.378483310978325	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr2-11254127-2	3.01052077724939	0	1.33236683026034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5200102-2	3.27081562197167	0	1.32897291564868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66240549-3	3.21756388642483	0	1.33504154049525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38633727-3	3.37604188752681	0	1.31619447464106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113619305-4	4.38067166847203	0	1.3484736357356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86063682-4	4.71499964060508	1.91530772507296	1.27310471728859	1.50443847946154	0.132468502702172	0.76033877064278	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr19-16009849-3	3.97008392621667	0	1.3061090928086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106631184-4	11.8982786098226	1.44488779051142	0.741140638845615	1.94954603051041	0.051230251354533	0.377374817383983	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84095608069772	3.78354948518999
Merged-chr15-53585319-4	4.19950950824757	0	1.30843380426284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171634651-3	7.79075537008689	-2.36219997092804	0.949649194905785	-2.48744482025533	0.0128664411578494	0.133987324924435	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3283836965895	1.00443616959195
Merged-chr15-87083123-2	2.52916517714937	-2.5748001540657	1.19458163961524	-2.15539906916284	0.0311306191515682	0.263949842880288	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78887403526362	0.609949614787909
Merged-chr2-52605558-1	2.44623735793201	0	1.35759145710892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-115368513-1	3.53770440347029	0	1.36071741803941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-18968549-2	3.84050033710731	2.12468396907225	1.1488997278061	1.84932063055622	0.0644115284895631	0.446582041451351	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.29684500016202
Merged-chr9-113782375-2	2.76578889656857	0	1.3448089564432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95479104-2	1.81100114318388	0	1.49027403176876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6769676-1	4.98775007799363	1.14384869523716	0.729786628732685	1.56737414773344	0.117027263079252	0.697361255989129	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98065054026598	2.27331056990106
Merged-chr1-170844662-1	3.54191055520782	0	1.33258706009297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107788773-1	3.34699316568018	1.62321559759359	1.00643270587415	1.61284066795477	0.106779128185509	0.652415980403016	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752351597074039	1.69442907999601
Merged-chr17-33562127-1	4.21563270326175	-3.43909834479158	1.20310759590459	-2.85851270202131	0.00425632067942781	0.057477481115497	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84704269689474	0
Merged-chr1-182376362-1	2.12315953512239	0	1.39922094419701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127027487-2	3.90881996674518	0	1.33754076381029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54733675-1	2.30635597930285	0	1.3557720907704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43849458-1	1.82681037914274	0	1.51749800442977	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51838696-1	2.51695879971721	-1.43671085644202	0.978380617979584	-1.46845801116637	0.141979853774726	0.797200165386086	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08473962141296	1.2972429702454
Merged-chr13-91132971-1	1.72803279048236	0	1.4540896686359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-105849467-2	3.57047450156788	0.802137341693358	0.943636226231683	0.850049329810719	0.395297660936745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.97930085042475	1.42690496303314
Merged-chr14-65069490-2	5.69680063777721	-1.06923275582623	0.793729089970824	-1.3471003763583	0.177947906960205	0.936339164960162	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31468296221336	1.31470332505763
Merged-chr8-126643753-1	5.30791002145696	2.23899957091399	0.877549948731723	2.55142123152067	0.0107284572042001	0.117097338310616	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23914791689217	2.7333888787925
Merged-chr3-84868228-2	4.66747652343672	3.73292929442357	1.05053093253958	3.55337399290043	0.000380323349903455	0.00890455378817311	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.05271282077275
Merged-chr17-64771547-1	2.81769481488836	0	1.39621618607754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-21272314-1	2.00516824548781	0	1.41798081241799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128705871-2	2.82497492573795	0	1.40358039197323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10284769-2	4.0343352175996	-1.00047139261162	0.99342940190316	-1.0070885668322	0.313892214948526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46159083012986	0.73596151290311
Merged-chr1-92775545-1	2.38359308912415	0	1.42207403693811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26127660-1	3.34233790531115	0.033594056990597	0.955884204544849	0.0351444838515697	0.971964530319997	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68949732595694	0.887107926668329
Merged-chr13-42061055-2	2.43815413029046	0	1.41846820071278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119445344-4	8.8783047503033	-0.791172589170596	0.663042319308998	-1.19324599068598	0.232773047741839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77398803494993	2.34406092952584
Merged-chr6-47781268-4	11.5206174103992	0.710769595246762	0.47337953724282	1.50147934020683	0.133231626353104	0.763253706616659	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40343740495077	3.96334521664347
Merged-chr4-141644383-4	16.4859074425692	0.861575968973623	0.534905972018933	1.61070545860933	0.107243935397638	0.65427711721539	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96179737228418	4.90606374911554
Merged-chrX-167195557-3	4.54536554431185	0	1.33866321615991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55235687-3	5.32320142395769	0	1.31775863060538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24643176-2	3.42074171949089	0	1.34199196994868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3728992-5	12.6556867826333	-2.1322587300306	0.811620307394834	-2.62716286249022	0.00861001141219052	0.0987044018795547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16032779086637	1.07938469868934
Merged-chr12-102398693-2	2.58496560711135	0	1.40965810075057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51247605-2	4.01010702093694	-0.463886907864391	0.908122616547821	-0.510819683830617	0.609477324695724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60723339648827	2.37868783856218
Merged-chrX-166923240-2	3.86794332841752	0	1.37853138061904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127318241-1	2.83142927705455	0	1.33718386595838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25826644-3	3.64325832768544	0	1.34158551490008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-112034845-5	8.85766695284909	-0.0690449417394985	0.600976032025318	-0.114888012267001	0.908533886999545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53234752040422	2.38501482800057
Merged-chr7-6241068-1	3.16423991021071	0	1.33675228683467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43290078-1	2.18264197779023	0	1.40039240659374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82835827-2	4.09292078523083	0	1.31959304859559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99497260-2	3.44342479918558	0	1.4014595034981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112973815-4	4.71147720523831	1.3026858968592	1.29791656078918	1.00367460914985	0.31553547944972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr14-21973282-3	3.99994489610183	0	1.36599540750861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74252885-2	2.90395421827561	0	1.3579392655991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107160232-2	5.66794352776419	-3.25914763168357	1.02331973058175	-3.18487715450454	0.0014481546841506	0.02526191030179	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83861057698579	0.306240821987646
Merged-chr6-134277129-2	6.01742928960932	-1.17185195981325	0.621529425897037	-1.88543279044584	0.0593714304576935	0.420379834726237	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61403341871279	2.14118653495162
Merged-chr1-173441272-2	6.60743046561745	0.0908132510707972	0.455847638479135	0.199218430468965	0.842091882945694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5918170951905	3.62542156834978
Merged-chr12-104178509-2	6.88690947068385	-0.59849028556315	0.698441699421621	-0.85689369070999	0.391503639981758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28840415944868	1.83258608720076
Merged-chr5-99602937-2	3.90197515394729	0	1.36118097061631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94277922-2	5.34607406933696	-0.755607229176195	0.63189992123328	-1.19577041203214	0.23178616524182	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60117068889367	2.34738686477001
Merged-chr12-111878406-4	5.52669985417442	0	1.31715490703559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37100407-2	3.91169050086312	0	1.31517811962603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55920891-4	6.17060857799312	-2.0451112999422	1.19053448470843	-1.71780937571335	0.085831390834248	0.552693936288409	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84364512579647	0
Merged-chr12-17259550-3	9.37638964184049	0.432111185371862	0.545788664249596	0.791718871563539	0.428524616083897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86576123883182	4.25076571746007
Merged-chr18-78161540-3	3.63194610025708	0	1.32976064232486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135631966-2	3.26982981473448	0	1.37250783849017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3279237-1	1.5321979162204	0	1.67476945056149	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58660719-1	0.905592857764265	0	1.95225724943908	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46639445-1	2.93669600499469	0	1.3500007482009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94811358-1	3.75324358640238	-0.155539789840673	1.01286373362734	-0.153564378579973	0.877953225489955	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03332992114037	1.47711801254374
Merged-chr9-5303135-1	2.55441550083069	0	1.45132513553306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11564456-1	3.30574213571454	1.39553381088523	1.30789588533179	1.06700680576818	0.285968762705393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.683637474991079
Merged-chr8-109039984-1	2.19723948454879	0	1.38966710412849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36318469-1	1.61842448709648	0	1.50622642676825	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117821042-1	5.29989451085613	-1.80859923465897	0.955565676259866	-1.89270008288485	0.0583977653910396	0.415964723920086	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50245378878707	0.733321818366247
Merged-chr16-15986766-1	2.77513212104656	0	1.36621330287098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123084615-1	2.51838509628195	0	1.40136655147201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101812135-1	3.12119098296685	0	1.38091033030116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130087641-1	6.36825022988388	1.08231123758109	0.621228623591859	1.74221083266143	0.0814715591581739	0.532330817393264	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68123592413592	3.65104858140409
Merged-chr4-53352893-1	2.2799084263682	0	1.41000747743551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105978110-2	5.176969638361	0.0310578089166579	0.796979580792264	0.0389693910172502	0.968914792498131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97107017314248	1.87273782600692
Merged-chr10-120812206-1	2.79541458971764	0	1.38754286246628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8362788-1	2.53585133411759	0	1.5217826792616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16491930-1	2.95083601614627	0	1.34577208046684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103421213-1	1.7208419716228	0	1.54913169049132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118478369-1	6.8375862741197	0.784243579041529	0.618977230670829	1.26699907554207	0.205155620446016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62099220422227	3.59073590770748
Merged-chr2-29670851-1	3.64150146348807	0	1.33519479598564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78477436-1	2.35662999736078	0	1.34153375152657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97790247-2	2.49867325549778	0	1.39998144544931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122553279-3	3.64787958795803	0	1.31011040610658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136628951-2	1.99521022702636	0	1.54269610950426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133836795-1	1.89905387470985	2.31766089112642	1.33295431811659	1.73873992501197	0.0820805199004265	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr8-127939382-1	4.96927842496914	-1.6104395783543	0.794426886565426	-2.02717154415149	0.0426448722021281	0.330924545011976	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1298553380063	1.31470332505763
Merged-chr11-50108250-2	3.63469937824465	0	1.33134449388647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50171895-1	1.26269908412386	0	2.42929713193549	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170173981-1	2.54738962228366	0	1.36566897032432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153526833-1	1.70230040109348	0	1.44058671069463	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83847228-2	4.16573168651889	0	1.34446906900113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61133923-1	2.30878865962034	0	1.39912573353244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9793852-1	2.22624679500308	0.103825197079884	1.4570359600786	0.0712578137565546	0.943192569584696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr1-4768518-2	2.5722451485398	0	1.38395589485606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-60566384-1	3.8549546076185	5.29518444793484	1.10832143815024	4.77766130444286	1.77345771566122e-06	0.00012759892041931	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.97271790757793
Merged-chr17-29796341-1	6.76889565731733	0.445997983263367	0.668088373184816	0.667573334852797	0.504405983518006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60873897948116	3.22840787878693
Merged-chr17-52560231-1	5.76995796127192	-0.673201877162612	0.732573310537517	-0.918954959836931	0.358119131096013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52795174707729	1.95001597236927
Merged-chr8-70544030-1	9.12352767241066	0.598872818585648	0.615633940012213	0.972774208279952	0.330665533965527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45603313110524	2.4627422823031
Merged-chr5-74809196-1	1.36373628177729	0	1.49781246237778	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147913598-1	5.66440930423563	0.642248675278022	0.76936869806427	0.834773596708467	0.403845194636472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15443861658091	2.53834308931409
Merged-chr4-149838971-1	1.94988084998362	0	1.4152922109822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97534069-1	1.78180749158641	0	1.41436854126316	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61208872-1	2.0876648445536	2.76808375783184	1.91879060680981	1.44261898510858	0.149127832285076	0.826049616724638	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656505258713436	2.53986243698381
Merged-chr10-87777276-1	2.07467756682296	0	1.40409199905233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152653172-2	9.76601859129991	-0.372303969623342	0.471250200927457	-0.790034611954793	0.429507554960398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76805606977851	3.3172217657422
Merged-chr15-79756533-1	3.86571873739055	0.831214765353824	0.886968417760792	0.937141333005157	0.348685862615805	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97199939758784	1.84647978065702
Merged-chr11-34102021-1	3.86221102426842	-0.526827879157398	0.827079786909644	-0.63697346676295	0.524142126726119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04904055786703	1.64500873683875
Merged-chr1-13153556-1	3.9489035976619	1.30942492764444	0.805132002186385	1.62634813184499	0.103875618070813	0.639338432556782	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68712656023226	3.0228459360188
Merged-chr7-127185847-1	3.13052491577881	0	1.36637472636685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35698627-3	9.89227900075716	-0.013296228781057	0.539942792972764	-0.0246252546642061	0.980353875096383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47216434814933	3.31103015307393
Merged-chr2-18872999-2	4.23689741331323	0	1.30726861233283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33119207-3	8.53422149895403	0.0371132118416957	0.555868636160511	0.0667661555759713	0.946767867202981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37613864429037	2.82174406728113
Merged-chr18-52473559-1	5.35579663838323	-0.46549946652763	1.00751572616623	-0.462026998128292	0.644061959696077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78195187487758	2.77190077035616
Merged-chr3-109353220-2	4.3787231473693	-2.865094170055	0.979602649932725	-2.92475134714239	0.00344731557964093	0.0491959562933427	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48643331616797	0.581381506691384
Merged-chr12-102494339-2	4.84334003949392	-1.62269102312389	0.819499722808112	-1.98009953873267	0.0476923449876656	0.358548547579843	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53146808872864	1.88639437725876
Merged-chr9-64703717-2	3.32512191323861	0	1.33477179990187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80761360-2	3.10921066667001	0	1.35174876618732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73417976-2	3.69474615899056	0	1.33185423886705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17954232-3	4.79477106943425	0	1.34472358713288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-77781555-3	5.07541793835184	0	1.30446226278164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75394447-1	2.3186757792115	0	1.33455289176757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24539157-1	4.05240784560552	-1.15991635854006	0.825442762364147	-1.40520507468979	0.159960305565418	0.868097842992926	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22739704038585	1.54311005189624
Merged-chr6-47562640-2	2.97416061489574	0	1.35340339825512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47348793-4	10.5730660586364	0.435901259114824	0.57049091338211	0.764080985147717	0.444818982964415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54206080319226	3.18687214103025
Merged-chr3-108883749-2	2.60931870338954	0	1.41457089393814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55702543-1	6.84750550415613	0.476360656884334	0.820495015630332	0.58057714892805	0.561525476867852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34304358242116	2.65333376094957
Merged-chr14-103547876-2	3.81617617291033	0	1.33475289644514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45824620-2	5.04144074193189	0	1.34296295729124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67250023-2	3.42546545270756	2.40207003799409	1.24732117348501	1.92578310146273	0.0541314623427958	0.392420073025553	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.851599296279844
Merged-chr4-133490771-2	5.22192377972473	5.97618495647237	1.18045425734171	5.0626145988327	4.13545324045666e-07	4.01538376598634e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.97343951655824
Merged-chr2-84541639-3	4.74892550808924	0	1.31236886300733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90182227-1	2.7049123061883	0.0113723785929497	1.26726100151576	0.00897398292802136	0.99283989367634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	0.469435083901436
Merged-chr3-79248922-1	8.05970715102399	0.310341031515322	0.791415465013509	0.392134151068206	0.694959095224257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62829478112767	3.40362431306977
Merged-chr4-106970941-2	2.65956323786315	0	1.36740232635959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5425552-2	3.40124867464617	0	1.39408054563453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3129869-1	3.01872699822607	0	1.43217936555099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77807513-2	5.07707031456107	-0.784817019590696	0.923551912745303	-0.849781164177105	0.395446763663316	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81654482346225	1.31470332505763
Merged-chr16-95732437-2	4.53494259508222	0	1.33077955068651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82010797-1	3.3522622125922	0	1.33123201134557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135150647-2	2.97373723358439	0	1.36611177154125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20307501-2	4.2071615556726	0	1.31595081646991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18388855-1	5.37045331145692	-2.08659239286613	0.966756305724299	-2.15834371134807	0.0309011185939074	0.262463669459257	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67327573316951	0.733321818366247
Merged-chr3-142474619-2	3.64774040119994	3.17235018418345	1.16874908774698	2.71431243664014	0.00664134967980569	0.0809674694359296	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.13132003301738
Merged-chr14-121865346-4	4.99382444006363	0	1.2972697194265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51266301-3	4.93730558573292	2.35687040158461	1.26078101596804	1.86937332632264	0.0615708929213747	0.431935111997136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr7-64349859-2	5.08502523095936	0	1.34008254642182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148375800-2	4.32477372393019	0	1.30740783679732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149120089-1	3.04118775587699	0	1.34975194938393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80230181-2	3.65598110609195	0	1.40081434390137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19940008-4	4.46598595941267	0	1.30585736561409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84592180-4	9.0114674015582	1.01034403410945	0.634010361307216	1.59357653402746	0.111030913801655	0.671312549345754	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94882778250317	3.73686805410276
Merged-chr9-41052235-4	11.2758914606258	0.0690887963267822	0.581477812880611	0.11881587705732	0.905421229718141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25963126009362	3.34911577852713
Merged-chr7-132690899-2	2.41013283520859	0	1.451136904786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6836938-2	2.94872603904559	0	1.36306462217416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20691168-3	9.04488185394987	1.41041927544805	0.63486787222981	2.22159497612363	0.026310689703183	0.231399505968264	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09172428092816	3.1936022353569
Merged-chrX-57309449-3	3.95440391252903	0	1.36438254503506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193905927-2	5.35764865473734	0	1.35141708426413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189701201-3	8.14620064695954	-0.378285790368775	0.619229703412004	-0.610897358903152	0.541267533425913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29344651860211	2.57151361581017
Merged-chr4-133609916-3	3.82125401203946	0	1.35129193100631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68145825-2	4.59158588859819	0	1.3039102933765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92697044-2	3.97631305850271	0	1.3013999032625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117081862-2	3.60040226953721	0	1.31352715623781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28310450-2	8.9211152552909	1.93100557710614	0.727997315497322	2.65248996939913	0.00799005018914188	0.0929232055865133	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58294849549501	2.78836296612388
Merged-chr7-113759389-3	3.68212630135202	0	1.33304002867266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6098079-3	4.00194516979853	-1.12326131463394	1.16527451661895	-0.963945661399244	0.33507316955554	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0.420961122473315
Merged-chr9-50834112-3	8.51661241796839	3.94757225573369	0.81487528306322	4.84438826134751	1.27002366678147e-06	9.80980691838086e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	3.93301441110323
Merged-chr6-6548240-3	8.96026133535671	-1.07489295228951	0.534366076083312	-2.01152917522019	0.0442695918514021	0.340094139327736	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84718097446641	2.65406131798662
Merged-chr13-110972755-2	2.07194710019249	0	1.45988777470573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114081739-1	2.40898825730094	0	1.34719116877764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166746695-1	2.28655019448584	0	1.35836911121056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167982702-1	2.44751202626666	0	1.3948802213644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3368319-1	2.15439521099139	0	1.41559782323859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21015760-1	1.70005796405191	0	1.58608189669624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58199605-2	3.44668768175403	0	1.32329917879975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154318009-1	2.09509828915266	0	1.35917732109056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10399361-1	2.01098871254701	0	1.43335068820145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46452646-1	2.61158704195007	0	1.37607359465823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140742069-2	3.97540415374919	0	1.30417653937938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20475029-1	1.60850242742674	0	1.45810482089549	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79475002-1	1.53905261575559	0	1.4840162381276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22853557-1	1.59262989989192	0	1.50845646368605	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51911407-1	1.36596120101726	0	1.46176985523185	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-104613205-1	2.99873324121939	-1.62161025870956	1.4641226895686	-1.10756446181936	0.268049958535521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1651994364789	1.14490468848716
Merged-chr17-87154621-1	1.41533520303306	-0.114465348783114	1.27159561544379	-0.0900170992986367	0.928273626717217	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25890695673474	0.735627456805112
Merged-chr11-75570448-1	4.61139465436473	2.93912225552492	0.825980848257893	3.55834189342759	0.000373203331101881	0.00878190308757058	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.070069993895	3.73147877784577
Merged-chr6-113477355-1	3.1918306828322	0	1.32104621077351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6982578-1	2.11795442912686	0	1.37489421591656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-28202310-1	2.53905363214306	0	1.38223938022174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31027635-1	3.38230463485973	-0.032669203274432	0.984550401363028	-0.0331818495317296	0.973529572127397	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60093006747469	1.72583980988184
Merged-chr8-39952230-1	1.93092216848345	2.95646473788336	2.0698494415081	1.42834772355677	0.153191797906516	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.40264952818025
Merged-chr10-40067349-1	1.88792977801979	0	1.56054471780714	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-7703651-1	1.34339227166463	0	1.48853843584709	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24910991-2	3.12492799431327	0	1.38151645755759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3788518-1	1.58353707317189	0	1.6337007344447	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32486031-1	1.75969466437834	2.84307682141354	1.19044844343525	2.38824019393006	0.0169292733574174	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.31470332505763
Merged-chr9-123270191-1	3.00195361756308	0	1.34100439629245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64759228-2	3.08751136130738	0	1.35080033867711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120854901-1	1.16093061622455	0	1.62073207039351	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39608679-1	1.99605053255551	0	1.4253906732446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77327948-2	3.77859929499921	0	1.34559180714149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75833094-1	1.49212254139779	0	1.40206655160335	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72821248-1	1.77939268465428	0	1.47936087337139	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37761147-1	2.96706829531655	0	1.428118816547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37880734-1	2.46356934554899	0	1.3727851994238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3512723-1	2.7509592825177	0	1.3410553094226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143834273-1	2.04797511687376	0	1.38231919008137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52066461-1	2.13536877210963	0	1.43740974423757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44437766-1	2.72215462839167	0	1.40965189952511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91258016-1	1.42174636882589	0	1.54880330857603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38773022-1	2.61073094823162	0	1.36587201458677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138178110-1	1.66333456572594	-1.4017925716376	1.31912857328033	-1.06266561124645	0.287933621185981	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66157036073427	0.609949614787909
Merged-chr4-141675733-3	11.8862122483334	0.0377501639479076	0.542482827319075	0.0695877584447551	0.944521780665669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4758860991019	4.10935919273017
Merged-chr17-27053888-2	2.90587533509377	0	1.3799912029186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76805230-1	2.1845943646339	0	1.36322493982749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12369162-2	4.24568395296808	0	1.32993332811378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53372855-1	3.96991398288512	-0.802973357174657	0.829600713815442	-0.967903406786716	0.333092612755369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63341043694485	2.03247245696714
Merged-chr16-32880787-1	4.60581120704333	2.23544270540347	0.94915588671548	2.35519026609964	0.0185132236922763	0.176530733313218	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50234129761474	3.10412509212469
Merged-chr5-100579023-1	3.05491764457448	0	1.33334319192374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58766001-2	5.10201345152158	-3.54372378200943	0.997019502265357	-3.55431741701906	0.000378961538990727	0.0088822169034749	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6027714634848	0.469435083901436
Merged-chr8-67515977-2	3.34820929242922	0	1.32512126935928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79303441-4	8.16425535334513	-0.660119157416587	0.940960663384196	-0.701537463896149	0.482967663013895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17435924253564	0.581381506691384
Merged-chr6-99096239-4	5.1607019231052	0	1.31816585837959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-31766923-3	4.31287912357023	0	1.34140132852169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107947849-5	11.5463572450665	1.00080908415653	0.437905519289445	2.28544523891926	0.0222867339400686	0.203970436421249	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11087410739392	4.01859142748117
Merged-chr1-64318163-2	3.86518329034807	0	1.36405701804984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55800800-2	3.40156807604228	0	1.33042728756454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3328092-4	9.90550194957218	-0.646731530754516	0.580004012596495	-1.11504664917627	0.26483043186084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27700819157006	2.73430231295182
Merged-chr16-50841873-3	3.60387687456374	0	1.37148837654507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83064621-2	9.48951922171898	0.824927231293935	0.654519993846765	1.26035451788974	0.207541501196379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48098820675119	3.41751376042665
Merged-chrX-20798356-2	3.38166601811993	0	1.38810318620722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98691048-3	8.36718823109938	-1.66484587260894	0.870040329833802	-1.9135272418084	0.0556805894639941	0.401246559231822	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82581694631325	1.04220233489076
Merged-chr8-11473920-1	1.56953842396076	0	1.43877769178747	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15201366-2	3.18139500645493	0	1.34720173376621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104370276-2	3.33866083170962	0	1.38455242634634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38392323-1	2.42891857399328	0	1.34676202236782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25488280-1	5.65524042750337	-1.29651308833769	1.08554093669957	-1.1943474856688	0.232342069780859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76266444580975	0.61242769162773
Merged-chr4-155549024-1	1.85309347438843	0	1.50554610936264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147389181-2	3.70513041423354	0	1.36556917080653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151011180-2	2.89981757701802	0	1.33039402551472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77823850-2	1.92476991660779	0	1.4001980893924	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90627568-1	2.19177661073484	1.94165325796471	1.39369013350625	1.39317428694131	0.163567093298532	0.880948469210997	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr1-173414001-1	6.18085206344555	3.27154294958034	0.948334675158473	3.44977678796111	0.000561050245915911	0.0120165156898136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	3.1143152953673
Merged-chr14-45691012-4	14.0766874474285	1.80443183264085	0.463738148721642	3.8910575668942	9.98082475411436e-05	0.00316298241698524	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22397540265689	4.28686997468324
Merged-chr15-5738323-3	3.69298738309292	0	1.32199396232553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127376189-3	11.6764674482047	-0.292309293264641	0.498844788202368	-0.585972431060176	0.557894041460119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73367986494153	3.14053924827089
Merged-chr17-47795607-3	5.50005144784712	-0.198592203083127	0.952798384037146	-0.208430457492658	0.834892876867003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30471971769484	0.905469781553611
Merged-chr13-23598126-1	3.03105238025369	0	1.31881745814828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-8051388-2	2.48774965854905	0	1.35970373474633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85867873-2	9.11468407022805	-0.658329966377102	0.553418700550111	-1.18956942676983	0.234215668336336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6945678561844	2.5063626915779
Merged-chr7-29144140-2	4.82957487918418	-1.19735056777312	1.01763026284109	-1.1766066826966	0.239352529249699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71013792004289	0.666688015277142
Merged-chr16-43805837-1	3.48673808753292	0	1.34528764638644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3472668-1	2.97130393531617	0	1.33709499369839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131110553-4	17.2323710920179	0.471877515167022	0.4266854724851	1.10591418174777	0.268763665884208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40662603336322	3.98390604826975
Merged-chr15-36540951-1	2.08696923749721	0	1.44788781092212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70604681-2	7.99578900497407	1.80693700890366	0.784470204485843	2.30338513632645	0.0212571832932487	0.196335250809983	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892597230197813	2.34310688897156
Merged-chr2-121309279-3	4.90238900644916	0	1.30202828593036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-16894629-2	2.58787488688628	0	1.4839495301433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36510398-2	9.72227926512715	0.987724301214886	0.789607576264132	1.25090529891836	0.210969030385654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89845656004806	1.77743761853437
Merged-chr3-89319714-2	2.84046523521198	0	1.37339901703658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32187435-2	3.32495224721219	0	1.33071585824478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75791224-2	2.60855755002686	0	1.41126390680478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97368286-2	2.85120341953764	0	1.37989317565448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9493480-3	6.93626655101041	0	1.30898690042825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128769211-3	7.40051822049088	1.65273198120003	0.624526478639182	2.64637615494104	0.00813592902734299	0.0941807649638184	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81737247320113	3.43358550291271
Merged-chr19-42477889-3	6.93669138813858	-2.35598153440876	0.756586225518283	-3.11396302886012	0.0018459261856047	0.0305068013466173	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66350036506264	1.15307255889252
Merged-chr1-155425966-3	3.4631400352062	0	1.38032638407581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72199075-2	2.96175598928106	0	1.3435557094615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142071758-2	2.60012435775138	0	1.36684360539694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94020810-5	10.6720508278239	0.427574310924411	0.637664104615965	0.670532193719637	0.502518590877718	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98602746860986	2.95069994624477
Merged-chr5-43883155-3	4.89907967099499	0	1.32188661225308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44982989-3	3.78595273110229	0	1.32138443551677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127506241-3	3.37902171242679	0	1.33723524179067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106362169-4	8.77751027015139	0.0745224966719409	0.661996403342002	0.112572358846247	0.910369600165246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88765892626095	1.93112180545279
Merged-chr5-136428079-1	4.62018893907219	0.744503388014284	0.831889403418235	0.894954767971702	0.370811267879339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28194574232531	1.37490486545505
Merged-chr16-30365697-3	5.83545226585559	-0.557213891908109	0.780350439175803	-0.714055972719938	0.475192569024228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94933091875801	2.32267539517565
Merged-chr1-131293836-1	6.57458771114004	-0.204098479748589	0.634526820243968	-0.321654614489134	0.747714364327023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88021830472836	2.85587295448269
Merged-chr1-85758178-1	1.94225256523063	0	1.52344172684171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75699303-1	1.10596273198585	0	1.81530885478481	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7222113-1	4.0619048360621	0	1.33273537682367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43361515-2	2.55988989639146	0	1.35503639784987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184048104-1	2.28960202258211	0	1.3935196417881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11145240-1	1.32239343566525	0	1.66714275566743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-124630844-1	4.6095137114784	1.67860886112465	1.53192784609485	1.09574929746445	0.273188502536455	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29260809278633	3.05919858138889
Merged-chr5-75039471-1	1.06926789571372	0	1.78077696726468	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100406285-3	4.91277824716193	0.407519284154958	0.884199484507366	0.460890660190792	0.644877052938634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26353188638628	1.43750690265746
Merged-chr10-111564343-1	1.15439923276124	0	1.55896193047491	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97007847-1	1.57401076835711	0	1.52361773762721	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25080461-1	2.32589054904318	0	1.36694358445118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122575598-1	1.72479781118496	-1.69362567046038	1.33750345939579	-1.26625890838852	0.205420403335008	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.856023420615499	0
Merged-chr1-6410164-1	2.28206422825928	0	1.49659748688095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24155086-1	1.41215695160947	0	1.62303262617585	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125350548-1	1.83416004308013	0	1.37903488817314	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34223258-1	0.927346970489696	0	1.76997234938212	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67875938-1	4.47456693043509	3.79371099871636	1.03446996039782	3.66729933584291	0.000245125779423898	0.00639440685917526	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.42139820021751
Merged-chr13-94106086-1	1.5627950548706	0	1.43453124528639	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138885867-1	1.33036247176201	0	1.72642722871023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27273388-1	1.36400786596774	0	1.80030862095393	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75127209-1	4.51510011344249	1.85151731781711	0.982374765997544	1.88473623499174	0.0594654576760376	0.420908773537517	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5742380332286	3.63828889185066
Merged-chr8-108692443-2	3.56714189562161	0	1.32645465008868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-110794714-1	6.728815560951	0.53483288288873	0.586070211846869	0.912574759947828	0.361466233982878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98029338805487	2.91972914370967
Merged-chr8-11163644-1	1.16604188610395	0	1.53069631610463	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8648146-1	2.09909727918913	0	1.50539914376848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105622858-1	2.61057388633957	2.77579902262948	1.17725930826442	2.3578484392888	0.0183811958729434	0.175502283096634	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.26501898168246
Merged-chrX-159995951-1	4.28802960701471	0.736995989090909	0.649114157339848	1.13538732864988	0.256213066507784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35604182660943	3.40942895253235
Merged-chr7-97822062-1	1.52673375431848	0	1.47017330353141	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116985125-1	4.90451441071803	0.735422132415436	0.814732870870785	0.902654303894009	0.366709395968956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41137811769054	2.50670197153503
Merged-chr13-94941380-1	2.79049926749477	0	1.34790881797241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-119027880-1	2.62234714444375	-0.307035292769038	0.812403341141512	-0.377934551989436	0.705479213982604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2834482612025	2.30944904015933
Merged-chr4-123995730-1	5.40210257841949	-0.93042694942074	0.787291228570292	-1.18180784397964	0.237281954704341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73207616718064	1.96353301543917
Merged-chr10-20948548-1	3.23314675846063	0	1.34715433461021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41181718-1	3.1098552320877	1.2887783570819	1.35891461301737	0.948388033167334	0.342931949275874	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr4-120851161-2	8.26707780945976	1.07063440204722	0.554965472897123	1.92919101157431	0.0537071536257033	0.390557273628445	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78022790099599	3.81338123068191
Merged-chr16-57532385-1	1.47247447271001	0	1.5751592202469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67859694-1	1.85999500158122	-2.13908771042748	1.4312475263156	-1.49456168209704	0.135028872708321	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38596446448878	0.683637474991079
Merged-chr16-33190947-3	6.55644062087449	0	1.29855593471959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-109525774-2	3.37504487099525	0	1.35673328179323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74976897-2	3.28156189072444	0	1.35420792230489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81564102-1	2.76194013941092	0	1.33175222340916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92526125-3	3.75225597980262	0	1.31529382984407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23534440-1	2.82934002293114	-0.249385980542326	1.10554431439466	-0.22557755242844	0.821530001433049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46082476840094	1.29684500016202
Merged-chr13-89885347-2	2.76271877141615	0	1.40207453009988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103102583-2	5.32281710958728	0	1.30774656455727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31664943-3	3.76345569814005	0	1.32743364884463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104426070-2	6.73403734775311	2.46288697785997	0.634467578217001	3.88181691613186	0.000103678923675652	0.0032603479049611	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72385105167503	4.53193558978663
Merged-chr3-62496068-2	3.21023297341215	0	1.38206001634433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171051619-1	6.78059969390084	0.0535155426338581	0.700815047028942	0.0763618630346674	0.939131209870685	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84876612198318	2.43884655774859
Merged-chr14-70963185-2	6.81499652411954	-1.99353778281918	0.740611736658782	-2.69174478899414	0.00710793143851866	0.0849806183033992	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83053204250239	1.46894927517136
Merged-chr6-82985220-2	3.00023180893634	0	1.31705619694331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72768406-2	3.93513562733614	0	1.36038415538747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58296491-2	5.1268649104488	-3.2868604869448	1.08946187512763	-3.01695778620959	0.00255325365605434	0.039147093713873	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03482172465153	0
Merged-chrX-133927001-2	3.7942174618907	0	1.36327710827542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8913040-2	3.56030409354309	0	1.34964748729156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180863812-1	2.10551139122312	0	1.39416721556155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73517600-2	3.00007197131568	0	1.40364859682962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33778780-3	3.78049269139624	0	1.35539713902465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-18876186-3	13.0533501416622	1.55475371733383	0.47821120301596	3.25118631167229	0.001149245187745	0.0211633814824072	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96636555722354	4.53677871952196
Merged-chr16-64865568-2	3.69026448104243	0	1.33078347669315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59723287-2	3.20076142923031	0	1.36541432479441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146399835-2	5.34469969501143	-1.64692192992559	0.720407381409621	-2.28609807787236	0.022248521422083	0.203734848773464	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8984117105865	2.08364730863447
Merged-chr6-41191117-2	4.68103100841625	0	1.35082447380946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66646428-2	3.50563847904147	0	1.34642794696957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46202347-2	4.00722379461006	0	1.34263744797943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46835792-2	2.9906677858476	0	1.34225235989087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22137955-3	3.52394882948702	0	1.32826790404827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61690355-1	2.94856956010151	0	1.41225996302027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46850743-1	2.44273906857308	0	1.39935184464984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105811305-3	3.61866039770291	0	1.30750766298717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127457960-1	2.1184681293463	-0.438947008557339	1.47592266962287	-0.297405153800842	0.766157209437484	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	0
Merged-chr10-67696492-2	4.23502741144623	0	1.31269201729667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67088290-2	2.91615767194736	0	1.34926139725025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93240953-2	10.1402777285228	0.781624671905669	0.545007984379548	1.43415269924071	0.151528691867276	0.835241999051792	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75032557897734	2.98597488410793
Merged-chr11-60305765-1	2.56718544640538	0	1.35997749799973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70383523-2	5.64644076813079	-1.0049827738905	0.756744852208356	-1.32803384252662	0.184166927072357	0.960171659925506	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57168593163081	1.41695929335733
Merged-chr5-107961569-3	7.85472522629997	-2.02495881024733	0.746025617946176	-2.71432878648602	0.0066410218763506	0.0809674694359296	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88780760641436	1.19380919831911
Merged-chr13-62620932-2	3.50274294482298	0	1.33268756885553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46231339-4	7.34083735512187	-2.93511097973598	0.839373132051634	-3.49678929150597	0.000470893612748894	0.0105128165420872	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.23436933520623	1.20539659680455
Merged-chr10-88678257-3	8.60361493957732	-0.0760423117252074	0.768954266121338	-0.0988905518513739	0.921225170664728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7683396094248	2.47281662318271
Merged-chr4-148102267-3	4.87296064116445	0	1.30536990469227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95503849-2	4.61231552710891	0	1.30391344394957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77413292-2	3.01308218518003	0	1.34169234638797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128753608-3	6.71420791748452	-0.36654980850128	0.662987782450735	-0.552875661066224	0.580348554658287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65755582032114	2.00098049458557
Merged-chr1-155210645-2	3.59919007566771	0	1.3452620645917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84156897-1	2.39174713875788	0	1.3765970922791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67856043-1	4.9732969502413	1.79007880024136	1.00092047142557	1.7884325991373	0.073706240806937	0.494910954395904	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35564321590327	2.41715323525411
Merged-chr19-34228618-1	3.46572029923434	1.76400555040594	0.75616542499894	2.33283021424633	0.0196570582155764	0.184867138347587	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85402297106514	3.61023077888958
Merged-chr4-99296933-1	2.811907644392	1.80944900129153	0.981649107334539	1.84327473816455	0.0652889075503064	0.451419844755298	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39441067922825	2.81622161625481
Merged-chr2-35231223-1	2.23111500638179	0	1.38744907440813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110841086-1	2.56130094332382	0	1.3585162575842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40744773-1	4.70546285438054	-0.266592751920313	0.769809456798316	-0.346310050579384	0.729109716139457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63946210921813	1.94794910654401
Merged-chr12-34651197-1	3.17059018720455	-0.594719251136832	1.17136896896683	-0.507712998118251	0.611654631532472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15896867560127	1.64254215594465
Merged-chr15-67187500-2	2.73252299452645	0	1.3478462943425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33243410-1	3.96365189856887	0	1.31681744583106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70290504-1	2.97953301061096	-0.449418243418228	0.968368975067252	-0.464098143362159	0.642577431895769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21695428317771	1.68820016584178
Merged-chr19-55928992-1	1.04563360070995	0	1.60640402191455	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43884866-2	3.80263398074812	0	1.3497210387575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73427089-1	1.49739385428226	0	1.47467549335462	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59118474-1	1.77125527057128	0	1.49681948494566	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76479975-1	2.586410610878	0.285800732851046	1.17643665049157	0.242937630965191	0.808053713348439	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.844994844608266	1.15692263537643
Merged-chr17-31072107-2	5.97761545303367	-0.682273180298408	0.744627095348758	-0.916261555025546	0.359529727032287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07452428947498	1.90336541133098
Merged-chr9-35043199-1	3.74934141129634	-0.216187112120844	1.27204003008448	-0.169953073022778	0.865047041956603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	0.382164212378408
Merged-chr13-35395787-1	4.65794443525731	-4.40467668180009	1.17598417196037	-3.74552378069636	0.000180017792775741	0.00502926151634185	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21625296022336	0
Merged-chrX-152207898-1	2.50160439544855	0	1.41433906968436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-139591454-1	2.66858366928658	0	1.35580905040484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-152322968-1	2.15654103167226	0	1.35893355586295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93605329-1	3.71781700643964	-0.984852798000276	1.12287046645196	-0.877084959863815	0.380440493200995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39340579604024	0.581381506691384
Merged-chr10-103453423-1	3.16820240064025	4.14398960830506	1.94278256718369	2.13301770270273	0.0329232740249176	0.275186014892846	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.94283950978213
Merged-chr6-54954462-2	2.45219612845381	0	1.39742669012452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-88895382-1	3.54481274765337	3.34699461425341	0.984460126501101	3.39982750357708	0.000674283762833648	0.0138908407207212	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	3.03473044346842
Merged-chr11-52346454-1	2.75797285681509	0	1.34339308896787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43630621-1	5.7410554195577	1.69148965363669	0.869677096412473	1.94496286105993	0.0517794483537833	0.380344771512368	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52949153279514	3.11913782298333
Merged-chr15-53730234-1	1.66132667968351	0	1.51959103078173	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123548314-1	1.98156016971762	0	1.3733295069175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54933525-1	2.59973053450551	0	1.38165902847507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33340797-1	2.34909687014101	0	1.37575590709711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45230359-1	2.08276582601967	0	1.49419575856081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27867823-1	1.34311932302906	0	1.61428768735612	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49270124-1	2.23862270489132	0	1.41781895315519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116570071-1	2.19963779096244	0	1.41592679665324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123566441-1	1.67446154060206	0	1.36243733599176	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6922456-1	1.89723450474201	0	1.41724926253489	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-53168831-1	0.947020264918729	0	2.01702748348172	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121354928-1	2.19729006856907	0	1.34111612699772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22325824-3	4.18812467346612	0	1.32625976432492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134711768-1	5.12154955415997	-1.57482617732731	0.816760026321782	-1.92813816368979	0.0538379431399804	0.391160132580071	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1891895829626	1.2679693671925
Merged-chr14-98870073-1	1.52617745039118	0	1.52518724942425	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62865341-1	1.51186128298702	0	1.41879511335982	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40781987-1	2.22495257164886	0	1.39484031245959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35499157-2	4.66164376411765	0	1.31258314397744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97064243-2	2.9654230690606	0	1.33163513417184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76088707-1	2.3912396149598	0	1.48655898033101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70751371-5	13.2009020077835	0.313963308471121	0.46172851329319	0.679973836209156	0.496521027595751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20098501539655	3.53291164498462
Merged-chr11-111327097-2	3.27746262759876	0	1.33926415885017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169299779-2	2.60444277902163	0	1.41224228561049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59828247-2	9.64709225829962	-0.75327125248588	0.540688836358278	-1.39316960483116	0.163568508813654	0.880948469210997	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54449273420127	2.44862538268337
Merged-chr19-45177130-2	8.48561145239195	0.556515729003188	0.636978765504317	0.873680190206303	0.382292442014116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38724495687902	2.92547448468369
Merged-chr7-120871541-2	3.950741023875	0	1.35029718646593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50160066-2	3.52876141731664	-0.184235581928188	0.773615400413081	-0.238148803436195	0.811765683723953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53697963366615	2.51945196365219
Merged-chr17-33897999-2	6.73089743431269	-1.10357412709751	0.917608343638547	-1.20266357073603	0.229106536525875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31332264405546	2.16430127775811
Merged-chr16-93691514-5	12.6225466378143	0.106971732076121	0.649712868184831	0.164644625825218	0.86922370417917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77188786003353	3.29482089062162
Merged-chr14-57378309-1	2.07854388759157	0	1.34957140088231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32333183-3	3.29300452152759	0	1.33926149346454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137719533-1	5.9559646032953	-0.935340986209053	0.729850223040057	-1.28155196324126	0.199999860409836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14220057523477	1.82413829516899
Merged-chr7-102313336-3	6.26294040452354	-1.02729631054023	0.900568125523646	-1.14072026471389	0.253986350811657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63026980311606	0.989878296978726
Merged-chr11-78349873-2	4.00208369976264	0	1.32418497529571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119152723-2	6.83310716087106	-0.14153062946605	0.833797325648935	-0.169742244442795	0.865212849861375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56404752622341	1.50078985575557
Merged-chr8-36267469-3	9.92960708823489	0.350567033918883	0.518497462478125	0.676121021390097	0.498963811072663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33921156204782	3.75592392544034
Merged-chr14-76699003-2	3.46214532543931	-1.97580528252823	1.32272487834801	-1.49373865636811	0.13524394060582	0.770635729231593	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22428337985691	0
Merged-chr8-14605679-2	5.70468096139821	0.157701444270539	0.570879317228047	0.276243050871543	0.782361393337121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14606090353799	3.1018582262475
Merged-chr4-62667408-2	4.17171135305402	0	1.30227768972012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35212938-4	10.9381983706195	-1.14251218573186	0.531244736423847	-2.15063248141121	0.0315052194536835	0.265918376442832	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.84856695365623	3.17431496269062
Merged-chr3-109169337-3	3.6143409528315	0	1.3182933934267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99200542-1	4.12817199785078	1.53438976395965	0.94841689441296	1.61784313733613	0.105696407246292	0.64725306231058	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03118561254787	2.26192334845542
Merged-chr9-94689816-1	6.84663869047068	2.84708373602473	1.00919876844646	2.82113278874436	0.00478543897356026	0.0628940658017435	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.881635912423707	4.07299891955197
Merged-chr17-88102771-2	3.0919701076365	0	1.31476887168975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89942223-1	2.69443570413144	0	1.38576622786192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40830189-2	1.85374135014585	0	1.46327772121641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43735654-1	3.79829289577287	0.473247717873049	0.845372990133541	0.55980936627546	0.575609474296015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9307040423345	2.47964850900044
Merged-chrX-96158068-1	1.81711219248554	0	1.39861334831476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29372273-1	2.71903112816965	0	1.36372582738419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102272479-1	2.09876642152458	0	1.38123871323145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145026924-1	2.63126712159992	0	1.32290714201636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46868865-4	4.42434591479359	0	1.30877174840803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46901581-2	5.98528135127303	-1.34664857510727	0.720622655142646	-1.86872916844489	0.0616605037578636	0.43241760877456	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06057330127402	1.35032549026822
Merged-chr10-91142924-1	2.6301571960036	0	1.36004383648823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43939495-2	3.93308425464249	0	1.34487047003645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134053428-3	5.04630137133292	0	1.30785634085086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106611317-5	8.40388795404285	0	1.29637177267515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31801375-3	3.88644181443531	0	1.31928006589507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136468585-4	9.58263979158126	1.60925792689807	0.60776913167813	2.6478112214332	0.00810147509528982	0.0939650322287555	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52932494806354	4.41669633008393
Merged-chr10-23979520-2	3.42674045952758	0	1.32549007887308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122562672-2	8.18273517910979	0.117530173546608	0.578122173832645	0.203296429139615	0.838903346388138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32735712283437	2.83098930992088
Merged-chr9-47772832-3	6.35647410129498	1.95790323525151	1.26818841478609	1.54385831980791	0.122622659283221	0.720454980535997	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr11-106627926-3	3.56444176351492	0	1.32435607303196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25633132-1	2.87950289260798	0	1.33542148648602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50905479-1	2.87205272137328	0	1.33017082099349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16156139-3	2.93620109697692	0	1.34093268332274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45201639-1	4.84607462826567	-4.64767598714741	1.0460762337376	-4.44296107420528	8.87292232047896e-06	0.000459073619916087	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52057002986019	0
Merged-chr2-170154350-3	3.43558530374495	0	1.32062973906291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69475520-3	4.63993638944268	0	1.32944088336044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97645054-3	3.47679556681055	0	1.38738243472253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55640680-3	3.32937122539899	3.40469609053109	1.14379858421326	2.97665702469194	0.00291409809986669	0.0435057469577083	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.29451429493117
Merged-chr18-67187344-2	5.37521893094684	-2.45526495582956	0.87557825759405	-2.80416391628573	0.00504472507619901	0.0656286292712125	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49213520237599	1.04885222765555
Merged-chr12-25146370-2	5.47854808748855	-1.254916416002	0.793396613364808	-1.58170125113073	0.113717786974087	0.682682821094048	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42612784391001	1.87757319456894
Merged-chr6-91677570-3	4.19304509662211	0	1.31416103844683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40548026-3	8.89948532229755	0.024111153317566	0.54963487715854	0.0438675824980648	0.965009955832986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82626701258044	2.4044790941682
Merged-chr2-125777203-3	3.30267254286782	0	1.4118311643378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71988250-1	1.91871079877413	0	1.36992472622143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73444486-1	3.4626845322776	-0.44940214569042	0.879021703986854	-0.511252616007239	0.609174179844513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54508574024083	2.17813337661218
Merged-chr8-122983355-1	1.10865901263017	0	1.59717925568808	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-22919164-1	1.61753432615792	1.6200837677576	1.39995551621552	1.15723946153457	0.247174539433248	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	1.00443616959195
Merged-chr17-28259328-1	2.17898997997838	0	1.47420867340913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105925035-2	1.92571531360971	0	1.42528529645099	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59027922-1	2.7148517773249	0	1.3292592262132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67253432-1	4.21371612094928	-1.22959034939984	1.00959839948885	-1.2179004543018	0.223261803563998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54527987944189	1.21444166002597
Merged-chr18-69585408-1	2.25827308186742	0	1.37273448569399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11690940-1	1.41583667566455	0	2.40656518810671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88385884-1	1.16345143528055	0	1.67046611654948	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47196605-2	6.69025633283088	1.98844160824083	0.812291371063237	2.44794131647378	0.0143675054106352	0.1451768994222	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74449209457463	3.98443010783851
Merged-chr5-82484768-1	4.19985377929483	0.915910436207338	1.15597318473789	0.792328445244179	0.428169189848451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87205693292052	2.66034808549024
Merged-chr15-25805466-1	3.51036625702875	0	1.31596680138336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53802243-1	1.87213665445807	0	1.51880958488442	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101678217-1	5.81116326476686	-0.0522816940139911	0.749717842016368	-0.0697351604616736	0.944404455889962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93654174475504	2.74199059449359
Merged-chr1-184573560-1	1.93120890159134	0	1.4210612944764	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66821954-2	2.6011120819908	0	1.4204424432943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150113074-1	3.49202194869385	2.39837402832749	1.11369081238304	2.15353669228494	0.0312765236214045	0.264728536178745	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.38860239282551
Merged-chr13-41263496-3	3.87468519335094	0	1.32088290555292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90451071-1	4.49609360042687	0.856912023174493	0.831272409791748	1.03084381615549	0.302614067177922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62394163930991	1.63412505265868
Merged-chr10-7825452-1	5.78490277234385	-0.302066235984693	0.663005997067863	-0.455601061409064	0.648676879751755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8032248636957	2.16596752412581
Merged-chr10-83857980-2	2.4770183323067	0	1.49885866872017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82774544-1	1.93637225767516	0	1.42632835605441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64470891-1	1.55535742785124	-0.730723407743806	1.40850564383317	-0.518793382861558	0.603904832859028	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36935319716101	0.581381506691384
Merged-chr3-146682564-1	1.9898344019647	0	1.38160684934417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108764640-1	2.29026545527689	0	1.33394919211898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180116210-1	4.18067807150634	0	1.3288024891694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85056399-1	1.98896839444982	0	1.39967683425793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88483918-1	3.2071602252337	0	1.32929362937614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-147272919-1	3.62623984905432	0.0498816729378293	0.962011420558114	0.0518514353071716	0.95864707119257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1440461141545	2.81951441047668
Merged-chr6-54056754-2	3.36725709339921	0	1.31850316075201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95598837-1	2.75768565178988	0	1.38207291838138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29474206-2	3.31723327936769	0	1.31941416222981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191151280-1	3.88173379672773	0	1.32097913332412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137042656-1	3.0092730119404	1.1361144372731	1.25521143357906	0.90511798003117	0.365402887717763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84364512579647	1.57215779683075
Merged-chr9-42138640-2	10.4003491045526	0.142354491938022	0.673000444705777	0.21152213651249	0.832479860524179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3834666986555	2.44857545836358
Merged-chr17-48274303-1	2.00957817535388	0	1.35456257521082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48510304-2	5.34951169329522	-3.9721654569471	1.08740059162851	-3.65289984898603	0.00025929538300453	0.00665772734688174	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3738596643217	0.306240821987646
Merged-chr4-139586611-1	5.36566931662418	-1.62880820904589	1.03613032490223	-1.57201094292805	0.115948013406607	0.692255722619294	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14024890199973	0.735627456805112
Merged-chr19-10580925-1	2.59242179392504	0	1.38693738894041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145113002-1	5.0406217608845	-0.722888283102054	0.658416483519952	-1.09791947983658	0.272239651009188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92730979013592	2.30945684676081
Merged-chr11-119253480-1	5.64330238394898	-2.39735350313931	0.891143526307668	-2.69019908955903	0.00714094030066796	0.0852607134820845	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90467218423058	0.733321818366247
Merged-chr8-81765512-1	1.65261857098438	0	1.93087070470995	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104422413-3	3.71059537132494	0	1.32145569320597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46423064-1	2.75338326115351	0.756823363104248	1.35791245514704	0.557343266302315	0.577292919932248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.306240821987646
Merged-chr13-80898663-1	1.5238435411832	0	1.46421845027196	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54382408-1	2.92769489048083	0	1.36918758670917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17368197-1	1.83621415025123	0	1.37652228502037	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77848533-1	1.48162601875801	0	1.43092847710252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29819415-1	5.25033438139634	0.965296391273989	0.830793541943962	1.16189684023699	0.245277370783906	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7439009384798	3.12570519757736
Merged-chr10-75551311-1	1.50225037847341	0	1.42676560411703	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22050301-1	3.55848985195697	0.162115622824906	0.834282497670848	0.194317420391176	0.845927346105193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58091213214652	1.40000983364339
Merged-chr15-7858159-1	1.61986049017452	0	1.8374365511113	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46446671-2	3.42224704478624	0	1.34359822496388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105748395-1	7.80348013405468	1.17137949988722	0.570117281973875	2.05462899814515	0.0399148525916303	0.315963168679912	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00336179910924	4.036690813534
Merged-chr4-156077059-1	2.02397074499211	0	1.47660367232253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48582208-3	7.76937628850525	-1.51575784014324	0.698348719108116	-2.17048846610481	0.0299698614531764	0.256456410602208	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72176892048869	1.47126464988938
Merged-chr4-41388705-2	3.30616655513445	0	1.3378908455966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181305129-3	3.73873576954508	0	1.34698342418989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180736761-4	4.4600118090188	0	1.31479084720395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179561270-2	2.93604639618177	0	1.37561524709587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-13787093-3	5.07830704279818	-0.204132508516855	1.26587069931445	-0.16125857769471	0.871889746426211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.306240821987646
Merged-chr5-64202480-3	4.34387564975601	0	1.30011146161499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144825358-4	3.76611669032347	0	1.33104060718843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117093192-3	5.33520924467675	0	1.30025506974674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100892313-1	3.30733043796788	0	1.3447149490165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156681989-3	8.54177537587689	-0.165061848021729	0.453324692132909	-0.364113958242838	0.715772914064636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64115590912963	3.45982731625878
Merged-chr7-142345893-3	11.7400408033058	-0.635003586096476	0.616826045280705	-1.02946947677525	0.303259115826403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11628611442511	2.65841191292647
Merged-chr14-13901786-4	8.80451430852582	-0.410679964626994	0.533244234295128	-0.77015359607189	0.441208786494661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17170813051471	2.58321587565435
Merged-chr8-42226361-2	7.13869661314699	1.58589197367028	0.66703785752068	2.37751419321971	0.0174297721859433	0.168336667641539	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16756002139024	4.58367290605364
Merged-chr18-61466196-1	3.83152807105094	2.89615540633404	1.14170608143489	2.53669088167959	0.0111905717385967	0.120769463390643	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.41695929335733
Merged-chr18-56439940-2	3.78241989154051	0	1.34249409483838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154881782-2	7.02718118159654	1.16322239912239	0.841481789588688	1.3823500561919	0.166864243281708	0.893678201605618	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37742441069769	1.75520908275751
Merged-chr6-134121560-1	4.68869949065964	-0.509820687608245	0.786372095856726	-0.648319911520782	0.516778058172279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24532036594192	2.08401249662001
Merged-chr5-107926709-2	6.32617389900533	2.33062735752496	0.751067932324305	3.10308463085681	0.00191514864922944	0.0314282530468475	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15739180407335	3.27612071477265
Merged-chr5-107967048-6	9.58752660571843	-1.03200661386304	0.559690941107395	-1.8438865775121	0.0651996716339884	0.450945993077329	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74800871275742	2.86122364749948
Merged-chr8-125061096-2	6.11164784225393	0.981798527130303	1.04098920657844	0.943139968143674	0.345609314526541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.10669213789164
Merged-chr18-65687260-3	7.27030124335811	4.46755133991949	1.02359671164091	4.36456202829888	1.27377703298398e-05	0.000613384185684385	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.31193049927473
Merged-chr2-122462179-1	3.10084775565841	-4.12076953561068	1.13751282418339	-3.62261369542707	0.000291641205056045	0.0073101596415774	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56980366326828	0
Merged-chr6-3394366-1	5.44286650141217	-0.480213855108834	0.759013474174065	-0.632681594528197	0.526941591504749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3118843003605	1.63879159991986
Merged-chr6-135156722-3	9.6368188027135	0.455370113124759	0.727739718853566	0.625732114556177	0.531490665212083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67328682788068	3.45574789017098
Merged-chr1-165660939-1	3.06989431013938	0	1.34772128217501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105286096-1	1.97343783647589	-1.09984800195106	1.49246041785298	-0.736936128284911	0.461161192226816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr6-91669481-1	2.50343728629883	0	1.38856352152218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114857940-3	5.91779013688174	-1.10871489840002	0.777181654817575	-1.42658398011243	0.153699844513323	0.844289680528546	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81662184557217	2.08153858449613
Merged-chr10-66909380-2	3.39077616334105	0	1.3297929361749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10973857-5	11.3866688842597	0.432437853716725	0.48030589977961	0.90033841748592	0.367940182317955	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2146473002221	3.82459919457377
Merged-chr14-73059879-2	2.77679603404914	0	1.34146490350212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-65108832-2	5.87864081970147	0.193395833903621	0.7957914497755	0.243023261883726	0.80798737717743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34207557893596	2.30492589888769
Merged-chr8-14546881-1	3.37230000391337	-3.29703078184959	1.12880842738227	-2.92080631387158	0.00349126802048386	0.0496008463399585	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48534050901253	0.844015785373878
Merged-chr1-23792955-3	3.70704527726022	0	1.33680160813302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102577668-3	9.17699881760854	-0.624208838501983	0.673997056549226	-0.926129917685172	0.354378467831742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79461151593875	2.05066483796074
Merged-chr10-67100376-2	3.24896790176823	0	1.36615748403818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66042950-1	5.06625281258417	-1.96372618898637	0.792950507163054	-2.47648014755928	0.0132685003896991	0.136991890859059	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48847774866942	1.207189364431
Merged-chr10-120840153-1	1.28821518598255	0	1.50239901423769	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73489458-2	3.53569528891113	0	1.34314896317223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31996438-2	2.5210655568164	0	1.35980776104256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13213468-2	5.77752490939022	0	1.33692499697393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115635500-1	2.1037385081282	0	1.40542232843605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53735330-1	2.87278385568599	0	1.42288742890761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116963478-1	4.34975575993458	-0.862796324888251	0.782394467027449	-1.10276383748759	0.270129736083021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16946921287135	2.62367387427232
Merged-chr4-134160241-1	2.33763072774098	0	1.49192135304046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186123894-2	2.84661020610754	0	1.34450318266046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-32401333-4	4.65354441477391	0	1.30076092085355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50421553-3	6.59603083520567	-5.03694207908959	1.09226088874325	-4.6114825963283	3.99807135653614e-06	0.000243256956111928	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85425809890719	0
Merged-chr12-100398036-3	3.39885765063991	0	1.37476552798165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86873657-1	5.58791631975483	-1.58742468095097	0.841171941333327	-1.8871583833797	0.0591390259445958	0.419324955444396	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61539653075438	1.27256041875316
Merged-chr3-101779100-3	2.85468457544986	0	1.35897793779766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48962109-1	3.15842084753785	0	1.3576426006628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88467292-3	4.83734155277485	0	1.30768705383997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118049519-2	7.88935103907919	1.62983687489026	0.805310992143133	2.02386021151016	0.0429845368419045	0.332843647881395	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44582885501996	2.25821626200969
Merged-chr19-22915977-2	4.01620896386152	0	1.32340528756029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34165272-2	5.92094231311165	5.47770397760891	0.984661742085874	5.56303118470423	2.6512848855216e-08	4.10547066657096e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.51187542435926
Merged-chr11-82078216-3	4.70243203037744	0	1.31246335796935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74386089-3	8.27890972621484	1.04296202643934	0.868850276939165	1.20039327156981	0.229986640772295	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00967833035899	1.40000983364339
Merged-chr1-176819475-2	3.53698717475302	0	1.31800957625706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-54058546-2	2.6641341475118	0	1.38820563726787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8306689-2	3.5287735762271	0	1.31052473433233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94525992-3	3.8940572874991	0	1.35582004760455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35984074-3	3.60846813519342	0	1.34288875278467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46976198-5	12.3567803899663	-0.146927539425827	0.554641418885668	-0.264905458595248	0.79108229316943	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80836845708611	3.40315496738222
Merged-chr8-70543769-1	3.67971384160814	2.01299330926698	1.00501398854137	2.00295053821943	0.0451825977455036	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.21653520045322
Merged-chr9-47621903-1	2.54760679214244	0	1.34843141113481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-42520909-1	2.5720520164473	0	1.38328771249625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32832358-1	3.44608420749039	0.942167132193231	0.966066671543582	0.97526098347626	0.329430818853656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.928670148753437	1.41959898789419
Merged-chr18-77708018-2	1.91477230577553	0	1.52679078208377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38484515-1	2.04407937273611	0	1.38039686839185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116246132-1	2.82341721660831	0	1.40733371831636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59310347-1	2.12985285736913	0	1.37255453445828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34693527-1	5.48938224781323	-3.29275698018079	0.99641021009597	-3.30461987123119	0.000951052958154566	0.0183488357258838	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20414303524885	0.805218875278971
Merged-chr15-91169182-2	4.17249086980292	0	1.31473623312496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-10480921-1	3.91904835624369	-0.289378249875802	0.941684636437424	-0.307298471992255	0.758616198635363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71550207866621	2.30810693946836
Merged-chr7-122980880-1	1.71416628411465	0	1.51557553002011	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70544912-1	5.2847400118975	-0.0510299456993198	0.628521319092537	-0.0811904769960663	0.935290472770347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56833582766131	2.45990924072161
Merged-chr19-14668059-1	1.89839024987885	0	1.39284096713034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171171847-1	3.64601778378234	-1.72921984759266	1.1394766541784	-1.51755618796726	0.129126318696251	0.746649714319547	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56975108225298	0.469435083901436
Merged-chr9-50499077-4	3.82387280428338	0	1.32617642194623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23054875-2	9.3988246682483	0.477698118024189	0.549538429880628	0.869271541442436	0.384698624834743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5077911578463	3.95494884104543
Merged-chr12-99975282-1	2.01472725240778	0	1.40697703559517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25151067-1	3.11063312396854	0	1.3207283912841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77453837-1	2.60791425761547	0	1.4953043432494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31214617-1	2.07301012429887	0	1.44777048627221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3692654-1	1.96480795532967	0	1.42392634414392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14053785-1	2.37099321431647	0	1.43251483775942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95645073-2	7.51294821039602	0.0102315505683264	0.66129689930927	0.0154719469863134	0.987655664876201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76050805765914	2.24040030834546
Merged-chr5-8356568-1	1.7401655631315	0	1.50495935458032	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3872755-1	4.71853541129925	0	1.30791276258879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80323382-1	0.996598492228366	0	1.65862058183089	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120032310-1	2.0035735177447	0	1.47763825579949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136459169-2	4.309356480391	0	1.33706119445913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167257364-3	3.87778240160643	0	1.3116697335357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97412696-2	2.7797217661547	0	1.33024423133925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95345195-1	3.68610351132111	1.27488470911351	0.850140004987476	1.49961735906345	0.133713548453749	0.764828049410161	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80469894986663	3.44650928871844
Merged-chr5-17882081-2	2.36422273952558	0	1.37871357687222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72290112-1	2.618002600181	0	1.38547575349275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35993143-1	2.19413300768532	0	1.37203231799751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90039086-1	4.09396897612435	0	1.33216052707711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179832959-2	4.10875957096681	0	1.3166180787782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59491829-1	2.76096033167167	0.252061106184976	0.903304864581149	0.279043229000935	0.780211649860004	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50200329760273	1.60572551668653
Merged-chr12-12222747-2	5.90699440415506	1.91251271161181	0.936756880874309	2.0416318797966	0.0411880605332366	0.322935926722422	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	1.82951538062168
Merged-chr16-36770354-1	2.04659259366535	0	2.37816087526771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31459623-1	2.56267145087966	0	1.37250641563111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32363996-1	1.95110299658399	0	1.44092200225094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150248236-4	4.10130109131555	-1.32341119832424	1.22425954539166	-1.0809890789137	0.279701971646363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	0
Merged-chr1-156491386-1	1.63959747584249	0	1.43892935629937	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15467850-1	3.03935274466228	0	1.32026948404977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172366634-1	3.83883979321709	-0.604782335331793	0.96973613686271	-0.623656593110354	0.532853135501462	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49472444115551	2.45916162824808
Merged-chr7-35093828-1	1.53638575224709	0	1.49586884133881	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68127792-1	2.3235741930857	0.969654710915374	1.10965074847294	0.873837747822703	0.382206620262567	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64972017024361	2.98700836604974
Merged-chr17-84035104-1	1.80646140795494	0	1.49130376802409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53063082-1	1.1273258470588	0	1.6016961535903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-9714806-4	4.45245517378543	0	1.33446223163784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69559985-2	2.91376104082176	-0.918654667161214	0.810856227050609	-1.13294396283138	0.257237786487931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67670196556971	2.29802325937094
Merged-chr7-101564301-2	3.97859705377022	-1.26803152925716	1.04156342588331	-1.21743092906877	0.22344030128348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88068755090639	0.683637474991079
Merged-chr12-112633791-2	4.0199304707875	0	1.36276483829623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109747786-2	2.93956032423592	0	1.35928238642344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78278486-1	5.50358154905421	-1.57691881269388	0.786093002288691	-2.00602067198502	0.0448540425082979	0.343051528762551	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81772175379593	0.993458951033742
Merged-chr12-40471608-2	2.86494307633771	0	1.33233407477075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26960188-4	5.66359488980278	0	1.30627030206373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79248288-5	11.4598698300086	0.780523305065194	0.45328539419058	1.72192467498088	0.0850831644589052	0.548795228973608	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61465362151333	4.20001260783489
Merged-chr4-59360905-3	4.35476273597263	0.0430752325787136	1.16630391304494	0.0369331115988924	0.970538338511514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.82311671115848	0.61242769162773
Merged-chr9-98334422-1	6.1948289907541	1.31023035082035	0.876401013820352	1.49501236324325	0.134911215588206	0.769343598379168	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55629907133197	3.76417489900294
Merged-chr19-47394959-5	8.95025483193615	-1.15379348488977	0.575452783845361	-2.00501851286522	0.0449610679337471	0.343427930473248	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5013269236201	2.0968009030329
Merged-chr8-105218152-1	2.80498153291217	0	1.34966706499964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148221662-2	3.07816865903442	0	1.32707432472642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52374515-1	2.61383615678373	0	1.36239017741471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141742089-3	5.91073960110561	-0.831515841056142	0.740040317717524	-1.12360883744922	0.261179005342377	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54832850447449	1.89999310574352
Merged-chr7-98963083-4	4.15693404757675	0	1.36756798514192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157443808-1	2.84824848384798	0	1.37233176867519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120947883-2	2.7043413263694	0	1.38610885268984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36015881-2	1.77454408963496	0	1.62509614332038	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-101481345-2	1.9755814192039	0	1.38110487848814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108931919-2	3.00579096939614	0	1.40224458976811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134279736-1	5.21586546129505	-0.370189976683482	0.940526501055262	-0.393598666564028	0.693877365850583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.775888957876	1.31734301959449
Merged-chr11-97771609-3	4.20045744604361	0	1.31298366654281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103013840-2	3.24592694048953	0	1.44180186085212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79565573-1	5.67404743861654	3.8485980156008	1.21794674983966	3.15990663475841	0.00157819703159396	0.026982957411444	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.2758756212311
Merged-chr4-56070220-3	4.06401409315305	0	1.32760045244433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31091330-2	3.69189473616827	0	1.3418447683728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36242273-2	3.49135876094859	0	1.3187268512632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62006537-4	4.26936984763082	0	1.29723574156837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4369314-4	3.5754239212288	0	1.33155050559058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133202422-2	8.98929372561203	3.60520290925958	0.732842412751824	4.91947906743284	8.67748473871801e-07	7.22049038535228e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.854675866246237	3.47133639125901
Merged-chr4-124646758-3	3.37312159944915	0	1.35042108452683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134491922-1	2.86270794839651	0	1.32123622011243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118539963-3	8.06195820095716	0.656032288013454	0.641802790906286	1.02217113622562	0.306699909325657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9227350384307	3.43404351967021
Merged-chr15-90275970-3	5.70602123328248	-3.60962051734577	1.06288667241345	-3.39605398301736	0.000683648749733704	0.0140306881909857	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6903595633563	0.306240821987646
Merged-chr7-16880892-1	2.81802397657928	0	1.34959660401056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150603723-3	10.2779881636112	-0.601640562277213	0.553279833582526	-1.08740735837334	0.276856820637803	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44016761676556	2.3020211711022
Merged-chr16-91365951-2	3.50129737551398	0	1.33277331303321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124049043-7	11.944459920902	1.40100367673024	0.489523747464672	2.86197285420019	0.00421012964569466	0.0570304999642544	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97760851655871	4.15953922972142
Merged-chr8-120499131-2	2.55615179851346	0	1.37233189822535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89256158-2	3.38577531495039	0	1.32340652512517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91290707-1	3.00825416824136	0	1.37630219127374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-40204300-1	1.88943292768145	-0.872683141383819	2.20144289426093	-0.396414162574404	0.69179951984372	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48262897499107	0.898163539755574
Merged-chr1-144294158-1	2.69427558301629	0	1.38823229041175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64702419-1	2.51802871674904	2.51734992899988	1.34745467959651	1.86822604657375	0.0617305696992233	0.432818845463397	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr4-59467307-1	2.36029446033971	0	1.35003868348178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-10636975-1	1.07840076119064	0	1.66890666554722	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17795335-1	2.28309740565537	0	1.39404630855118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-89149316-2	2.98630460961632	0	1.38102565518516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80873052-1	1.95313114736106	0	1.40284994093269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100449969-1	4.10390026995972	1.69091113845527	1.00423998063472	1.6837719778758	0.0922257447322967	0.583067290564693	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	2.45916162824808
Merged-chr4-133445943-1	5.26382987418086	-0.173801906315784	0.684355180552974	-0.253964478175424	0.799523000861183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42396931690586	3.28614646367484
Merged-chr10-12548619-2	2.71480895468867	0	1.3616772637126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61656588-1	1.13827946463089	0	1.56942622305453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67955782-1	4.66690589758392	-0.0172444549485125	0.814244482646838	-0.0211784731932803	0.983103286334574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7308217513188	2.37882470607712
Merged-chr14-78678136-2	2.60505268847092	0	1.42991491058374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43338068-1	2.09594843339508	0	1.59079004375707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151684271-1	1.6681083747566	0	1.40606688204693	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83131446-1	2.24309469055368	0	1.37251064122144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8519136-1	2.72920883668371	-0.959532640192304	1.05812233286822	-0.906825808686342	0.36449891955714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76012057387604	0.73596151290311
Merged-chr11-4336459-1	1.52757104387311	0	2.40180950647988	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25836987-1	1.20599201924595	0	2.1701909647418	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78807582-1	2.82501094731418	0	1.35315412761648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101779591-1	2.59022470647903	0	1.35211904364547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-92841209-1	2.70556484779043	-0.768487336620373	1.10000944725191	-0.698618851447357	0.484790259395033	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28436902346956	1.47711801254374
Merged-chr5-99246136-1	2.13376384954154	0	1.39942240067778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77905438-2	3.14481520652928	0	1.338171082446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26981309-1	1.81231604784086	0	1.40088301911683	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143135102-1	2.3463149342568	0	1.52098439053949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154934142-1	1.64310678963657	0	1.39311769624144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83665275-2	2.79624986177528	0	1.33733479400739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40524580-1	1.73011539050107	0	1.38507833694508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129533405-1	2.81342491644619	-0.00230681537893887	1.01138043503059	-0.00228085822015046	0.998180140018676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90681142033759	1.54028618764495
Merged-chr3-69453712-1	1.62355634292982	0	1.78180192490367	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-114467655-1	3.39374300305582	2.18356880172291	1.15615850976479	1.88864137856594	0.0589398985092869	0.418459861076192	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45423742634785	3.90746750172548
Merged-chr10-40489552-1	2.81488228125676	0	1.34666694758497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15060872-2	2.59901592826969	0	1.40002100258337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161477252-1	1.42673826170893	1.68840409165423	1.47676716088311	1.14331096761697	0.252909502948153	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.581381506691384
Merged-chr2-70945091-1	2.37797141868661	0	1.40668130336995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52577329-1	2.68063884364596	0	1.37296115118166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31087108-1	2.50168660462995	0	1.38489124678356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125541096-1	3.58740407816227	1.63739972896993	1.05357402255464	1.55413828921073	0.120151433690069	0.711307808109373	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37129738284915	3.47184148756515
Merged-chr5-90652933-1	2.53553200493693	0	1.35259380773226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99245596-5	12.7104693918099	-1.52797852672827	0.745448778325615	-2.04974314957002	0.0403895019129682	0.318409023043168	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.854421899166	1.47971361857133
Merged-chr16-58481967-2	3.95208639015341	0	1.30605474853775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86250487-2	3.21675223725788	0	1.31556368980557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36967300-2	4.5109462434893	0	1.33250295199101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30789705-2	3.3685448180651	0	1.31578584979756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59352636-3	6.44640482151631	-0.173261938636564	0.858474614282453	-0.201825349001593	0.840053263683521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92500570454126	1.89082683942207
Merged-chr14-45687363-3	5.48997582220954	-0.429822661936385	0.764978783599146	-0.561875271774354	0.574201002758308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18490176082595	1.73775798795819
Merged-chr14-25858186-3	3.55553923625041	0	1.36275538411065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44537871-5	12.9011538928575	-0.801030300561332	0.414595259408999	-1.93207780933914	0.0533499028072153	0.388391571840496	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.21200760551218	3.36793544212227
Merged-chr5-101969315-3	7.65394293340666	2.0602560450685	0.682841964425889	3.01717842839478	0.00255139584117773	0.039127789870359	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90634249455101	4.22722780130609
Merged-chr5-23416005-2	6.73182360233892	-0.0131320832835471	0.708373357836873	-0.0185383641807873	0.985209372627279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51049404223503	1.74427237692098
Merged-chr4-139293818-4	10.0456003064712	1.04764680284589	0.60470596921081	1.73248960021538	0.0831864271636256	0.540098540005742	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20590893718954	4.11365905378018
Merged-chr6-71476944-3	5.05592271765951	0	1.30200388268074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19936201-3	5.15329107093756	0	1.33192285117719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120934843-3	3.52643571834518	0	1.3334464477829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103065159-3	4.24340551007102	0	1.32794030992426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43678716-3	4.19463946786472	0	1.31242552692344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24024863-1	5.72988710113531	-1.01204629393393	0.878582878490027	-1.15190759882925	0.249359045346565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53202622615103	2.18911587802649
Merged-chr6-30326266-2	3.05793459842894	0	1.37494729756022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126848250-2	5.49679765877677	-1.21563290398245	0.753346006685284	-1.61364485003541	0.106604482668443	0.651653557011422	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57475436042972	1.61177918077585
Merged-chr6-136989984-3	6.86892512847037	-0.128000819472531	0.725117595409478	-0.176524222116342	0.859882120968116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15220616398466	2.16680051662379
Merged-chr7-99818542-2	8.00241416720207	-0.377663301001274	0.642089329037021	-0.588178753208183	0.556412317005092	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15815795160668	2.81733431498626
Merged-chr15-101983748-1	2.16826788025892	0	1.38577930445647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78996799-2	2.67965150474221	0	1.43776837753452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79182072-1	2.26186138263936	0	1.38156656665312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-3009973-1	2.0224225127466	0	1.38953336226732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-59020521-2	3.51746797075686	0	1.32557490003875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57546019-4	4.44494224517228	0	1.34197449206216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59515067-1	2.90440820203052	0	1.35388287325486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124873320-1	1.93306725751747	0	1.3902023663287	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57905985-2	3.15134753657098	0	1.33864035348401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126629767-2	6.81385896489727	2.74341291524257	0.763124837728927	3.59497264354154	0.00032442566513351	0.00794599681927075	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19128990969556	3.91884181450402
Merged-chr12-38860327-1	1.68840461113925	0	1.4331855293904	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4345500-1	2.50809208490887	0	1.40398158017925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78612267-2	6.49886833539886	-0.475271322927661	0.671952642881856	-0.707298837146213	0.479380788038766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46490214353933	2.5459572792821
Merged-chr19-43993574-2	7.65107660785461	-0.444534717030795	0.655816518405097	-0.677833974221744	0.497876967165351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74895957450283	2.61681377988095
Merged-chr14-21279201-1	1.84941123783932	-4.10298693390422	1.20752230801929	-3.39785601198076	0.000679161558449648	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89061331077799	0
Merged-chr1-52703292-4	9.33115249579392	1.38448513182068	0.557473189678587	2.4835008345763	0.0130098029571109	0.135092735425929	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56456237996624	4.22601980067284
Merged-chr17-24015818-6	20.0281758001557	0.00288998252998071	0.454263584810245	0.00636190666964404	0.99492396713215	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.96237360454629	3.97511283129314
Merged-chr6-5102507-3	4.5555128271346	0	1.40200964615725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69938486-3	6.16533495494307	1.50955264258842	0.807501642999036	1.86941123361928	0.0615656228784035	0.431935111997136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708251031414953	1.96027510505613
Merged-chr6-135995440-2	2.66367523667413	0	1.51001196525811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5522215-1	3.11723734309661	0	1.35100360339665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47438160-3	3.72207411974198	0	1.31661863394579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27761013-1	3.4099534201367	0	1.36431198536693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95746655-1	4.52834716204047	-0.557044287242517	0.647673477801369	-0.860069628192115	0.389750662052248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26999619828927	2.23921600458732
Merged-chr18-10776507-1	2.73331319720335	0	1.33608628861282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60857772-2	6.18991929674122	0.981444598437911	0.865409389508172	1.1340812918562	0.256760450291849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4913103726991	1.61691174577224
Merged-chr2-164009178-2	4.80604319139682	-1.28389272931497	1.04398701307615	-1.2297976059414	0.218772904957887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27951327172882	0.563523181795778
Merged-chr19-21943623-3	7.16488596247829	2.00242936935188	0.686591954888949	2.91647659879114	0.0035400927805343	0.0501161611636622	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08582593428369	2.55771059403982
Merged-chr15-97789207-3	4.2675303163108	0	1.32697022899258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84356809-4	3.93607430922	0	1.35893487985751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117385900-4	4.25476794247117	0	1.3103918206656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43269184-4	4.05569451825432	0	1.33075395485493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16211124-2	5.55038474661675	-2.0912951818688	1.06268461243785	-1.96793588369674	0.0490754153843234	0.365957103013123	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74870217115406	0.469435083901436
Merged-chr11-100816319-2	3.57595508250186	0	1.32959832256248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51424879-2	3.19710230753045	0	1.33214012751171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164336082-4	4.52936128217093	0	1.30213284090995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-118107788-1	6.69316252119478	-1.15754610562097	0.617525354181103	-1.87449162659238	0.0608626950975442	0.428201299940151	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84604485583645	2.22299259577626
Merged-chr5-67739442-3	7.72052207522643	-2.24996911532672	0.705006183394925	-3.19141756245611	0.00141576506379232	0.0248336697306486	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.15727842960904	1.87744667331019
Merged-chr7-125579635-2	7.41672488635573	0.870283984534341	0.672727141789519	1.29366563421137	0.195780940676797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.669313377453	3.24742463732395
Merged-chr9-22151140-3	3.70662366767128	0	1.31113668990518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33997075-3	16.1708801433328	1.93926494877054	0.437057462464046	4.43709378130128	9.11815748882745e-06	0.00046953122085494	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0862257542575	5.02778832913393
Merged-chr16-18108404-4	4.72769759967414	0	1.30347879787144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105970965-1	3.49468085533998	1.69616835037018	1.13864265676983	1.48964061752436	0.136318756135584	0.775272884111043	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35163611079865	2.27510078813581
Merged-chr3-105039073-1	2.45211325082353	0	1.35943045380434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76857402-1	1.70061195789026	0	1.44209826507694	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83881188-1	4.48186000109627	-0.272183626482664	0.933671789929075	-0.291519599733586	0.770653956088469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28520926215722	2.21312207999876
Merged-chr5-76244594-1	2.00538076380131	0	1.40999694829027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181483966-1	6.95780894939534	1.03041526366305	0.693046888617384	1.48679011562798	0.137070252921071	0.778057048938527	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74144744810689	2.75703864874546
Merged-chr17-79569836-2	3.26510986621633	0	1.35363951430262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167842550-2	3.61330256704414	0	1.34577513648104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84783019-1	2.99480333160849	1.39107712036287	0.756161906607105	1.83965511646127	0.0658188869889832	0.454123217102956	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76202992743303	2.70317705787455
Merged-chr8-39625432-1	5.10199188005844	-1.03402299802056	0.926128410889593	-1.11650067729521	0.264207880437892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22060162248178	1.31734301959449
Merged-chr16-10987647-1	2.28202115526436	0	1.34101690763606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6415594-1	2.160572589335	0	1.36226145346641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26547953-1	2.73800669580483	0	1.36513624285041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13593326-1	4.63094434943768	3.34841495960926	1.12781563806567	2.96893822588961	0.00298830664289668	0.0442702981762511	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr1-151575354-2	2.82425721175917	0	1.3382282811229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39257768-1	2.08494352103055	0	1.3778525968227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33993476-2	6.81485063982149	0.805592242627711	0.592421012963665	1.35983063564479	0.173883525346035	0.921689880537152	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.055729413622	3.76766942137763
Merged-chr8-105609360-1	2.15562805503013	0	1.41484588750196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91968178-1	1.97958133456516	0	1.43874894363211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13417321-1	3.82258970028012	0	1.37777159171149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121592272-1	2.85424000809181	-0.71961652234962	0.965433817257014	-0.745381516046528	0.456041114737987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53842679403808	1.14490468848716
Merged-chr4-119104983-1	2.65859482259543	-4.54891323250637	1.22319138827738	-3.71888919109592	0.000200100802285222	0.00547104059670715	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30220382481832	0
Merged-chr15-100714706-1	1.91412475666838	0	1.38794189303663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44164381-1	2.93641297880414	0	1.33435932694989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22872509-2	3.65153961113395	0	1.32228028313438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79030767-2	3.68551719130586	0	1.33933871259321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69060884-2	2.72111651548783	0	1.37016746475772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150375529-1	0.791358258818338	0	2.42076661231534	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44058896-2	3.5227121943203	0	1.32469501328937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89488035-1	1.71440925731721	0	1.39610038398244	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32947313-1	2.40930331321881	0	1.37666724291721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73041714-1	1.54397644052427	0	1.44296805762616	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115899847-2	2.03956437384087	0	1.40159479459611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99336056-1	3.25426409911869	0	1.34302611087192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49198012-1	1.77581309539337	0	1.55316285661535	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76894281-1	2.74135790917728	0	1.33981020942241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145157053-1	1.91302231708056	0	1.37705792290629	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33697094-1	4.17304411637339	0.661147985457741	1.02158318291696	0.647179785761492	0.517515592426238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30335444385595	1.38195934385413
Merged-chr9-77689385-1	2.86697038866879	-0.306209803847429	1.02623626866208	-0.298381389547495	0.765412091499803	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25221160159353	0.73596151290311
Merged-chr8-110075633-1	1.61182120436967	0	1.39055997353201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93485492-1	7.35900301714374	1.74100248054064	0.657602484001181	2.64749985423947	0.00810893946989893	0.0939679337435918	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32117355068748	4.18868224432605
Merged-chr12-35292528-1	3.17978018616793	-3.84301108115463	1.16384695848345	-3.30199005388325	0.000960014742376433	0.0184655295527214	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33490271888588	0
Merged-chr10-108190218-3	3.64977041753043	0	1.35024712814112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124146138-1	2.18748731124266	0	1.61584560480876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59822315-1	2.447649114358	0	1.41726833244085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115712393-1	1.73601261528252	0	1.4078458914486	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-30779771-1	1.42931295664875	0	1.42793380173374	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116211035-2	3.07471485028929	0	1.32780599761718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81065443-3	7.18790054986485	-2.28073469506335	1.04582110033227	-2.18080768722178	0.0291976437582549	0.250946893203594	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61962995612071	0.733321818366247
Merged-chr2-49734124-2	3.43844523905269	0	1.3507238108535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37097571-3	3.45336037730038	0	1.33987255425398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161053263-2	7.5054614812802	2.01971292631067	0.901524022546037	2.24033178905949	0.0250693909526039	0.22335410914476	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87133905602135	3.42467233926184
Merged-chr15-81057899-2	2.26729696791194	0	1.38117797070175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135460979-2	4.07094093821892	0	1.4026953466189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4450203-2	2.61689741063119	0	1.36993771473533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74341221-4	8.04752457221617	-0.516002829364988	0.664457775811899	-0.776577305810719	0.437408195088799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12604963236161	2.44230805569002
Merged-chr6-117802244-2	3.10397047609809	0	1.44714913420821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16256188-1	6.27678131276656	1.81618594720257	0.738348426101159	2.45979524435763	0.013901630187594	0.141630172472485	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14661142738816	2.54204578080207
Merged-chr17-87247858-3	15.23427539078	1.25459965392017	0.47245643880316	2.65548217968698	0.00791951177237888	0.0923133100745398	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74259526307728	4.66921776648676
Merged-chr9-22814981-1	5.54118557989182	0	1.33374030893095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59244562-2	3.17039455185319	0	1.33585222494508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9541430-2	3.67736447480924	0	1.38083888390899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115710022-5	11.0911948000097	-0.0199514608101946	0.451867204779716	-0.0441533720508018	0.96478214949043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72687894293116	3.02074820190239
Merged-chr8-123202432-4	11.5563400660238	-0.269890339203597	0.428287575793	-0.630161495354797	0.528588928694334	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.07844318829524	3.84968850430915
Merged-chr2-126712743-2	3.32375480920759	0	1.34754123493228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84714016-1	1.58670212839514	0	1.51264008290588	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-7073465-2	2.68363106396761	0	1.40666155978824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117094303-2	3.51185978938114	0	1.33923399655202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55673414-1	2.13014282454117	0	1.36000045889668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57759533-2	2.81157894809648	0	1.33862977042782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128302375-3	3.63187985076314	0	1.32949334768708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109907785-1	1.9567048658336	0	1.45883600897738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107605537-2	7.75319729481056	0.469806803122291	0.510686185636947	0.91995204948873	0.357597817404909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06320431085579	3.49120428477706
Merged-chr6-59219953-1	2.40915146214032	0	1.37492894234254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117786069-1	2.19047548745813	0	1.36746206250395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24984388-2	6.36450058263735	-0.679985213301803	0.677136363402159	-1.00420720264576	0.315278751121405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75211092809927	1.5268023559189
Merged-chr10-93078547-5	13.0014076124048	-1.09849526011502	0.575907992522508	-1.90741450783406	0.0564669321638026	0.405615933733741	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89232130336917	2.05997137679559
Merged-chr11-32682530-3	4.12815233882523	0	1.33728090211544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31024455-4	10.508511337025	-0.714168352886618	0.487656003454037	-1.46449207602943	0.143059546567799	0.801059908313572	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91345307187957	3.26720816040186
Merged-chr1-4769997-2	2.68723910143594	0	1.33304376585438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81787555-3	3.51434977878012	0	1.34424169147819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34294502-1	6.21500889344391	3.30534554016154	0.670130518125403	4.93239070712341	8.12292316473485e-07	6.84021310725211e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30415454164596	4.49998132607461
Merged-chr4-145295797-3	3.82721039902602	0	1.31060069790313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76473647-3	12.3588569360245	-0.0883815737380353	0.479090952577172	-0.184477651399186	0.853638757868751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12757486605554	3.94217339429598
Merged-chr18-82479819-3	4.16107374114051	0	1.36332043161052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-14658051-1	3.67999629122508	-0.865820821357029	1.19609956946827	-0.723870188952524	0.469145433316095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27627544538518	0.581381506691384
Merged-chr2-4551257-3	4.0471356830181	0	1.33000332597841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133297963-3	8.90825669620976	-0.642803342738212	0.591513425323578	-1.08670964211265	0.277165151389634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3940932771903	2.31474998843974
Merged-chr12-55863238-2	3.2791991996893	0	1.33098839432656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130621477-3	4.2349739848999	0	1.33666489250594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14010414-1	1.44819995912694	0	1.52462856497872	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-92406849-1	3.78905361394259	0.909001962918486	0.884221854866943	1.02802476314643	0.30393817938827	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46390214524733	2.67122493558876
Merged-chr1-171699209-2	6.50712315499986	0.03612300331898	0.626325499480388	0.0576744893014069	0.95400791445034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66434720508037	2.37528155229931
Merged-chr13-48842013-1	2.66689572576593	0	1.35749135711271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83827733-1	1.95367381461551	0	1.56548528372834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18652764-1	0.934913340729409	0	1.83117493372867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-84343863-2	3.18605529813009	0	1.35512412711791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42603590-3	8.79288564984056	0.0439781038140488	0.586540406547828	0.0749788136044856	0.940231568728939	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91494326753057	2.69153606396365
Merged-chr1-170854422-1	1.80535439316438	0	1.41519247964513	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-79706987-1	2.84505094019527	0.46534563412914	1.10669396877144	0.420482669337875	0.674132887263038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3762458884723	1.81518459389541
Merged-chr17-88341204-1	7.46391708701614	2.32602432090782	0.749119086816561	3.10501275677334	0.00190270818230642	0.0312790865109422	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29315420321512	3.14431762525547
Merged-chr9-106303188-1	5.21495075798121	0.344806483793945	0.676981618632531	0.50932916685454	0.610521516969479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17344086654543	2.5473977117727
Merged-chr16-97778828-1	2.34099109593179	0	1.36380123895753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82083593-1	2.94090629443146	0	1.3417652108147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30244625-1	4.62454625235375	2.33353025480117	0.805515309886696	2.89694090994919	0.00376820722931852	0.0526035611209246	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03337619474158	2.37868653224879
Merged-chrY-90800413-1	1.70281649070634	0	1.44779877286198	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126645862-1	2.53918828351548	0	1.367370675058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105584172-1	1.1638354457189	0	1.49478930657736	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86801833-1	2.58148159211489	0	1.37542596197683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135662064-1	1.50954294436354	0	1.6240150047323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121942911-1	4.59503215819689	1.64248496425244	0.873256315032966	1.88087384651829	0.0599890816737414	0.423743004113318	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85341508118712	3.93471588347247
Merged-chr1-165700595-1	2.67398372841455	0	1.36277417032673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35726262-1	4.27878874397008	1.86849166175411	0.985493715038774	1.89599551295017	0.0579606378589679	0.413888738010285	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708251031414953	2.16318252143804
Merged-chr1-120083427-2	5.42044846714518	0.663331413381344	0.785472012220637	0.844500380740512	0.398389850691168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56715307358762	2.15768836563541
Merged-chr14-9401045-1	2.48197053696525	0	1.37384621062187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153910031-1	3.46100214421981	0	1.33470393034507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9217997-1	1.05342160366024	0	1.7906242458482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118887311-1	3.07196953615191	0	1.33869484434201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19707282-1	2.82449348489459	0	1.38492430960105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88192442-1	1.65495194757384	0	1.4897118639707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29603438-1	2.3077829354094	0	1.39176252420477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103214417-3	3.75572077614607	0	1.32564325188766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121736661-1	2.42856135191048	0	1.36903661713055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156705656-1	2.14118403968318	0	1.35783419803878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42583669-1	1.37313660327404	0	1.46626658190407	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169213947-1	3.01944866906917	0	1.35891693174089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115616148-2	3.53210242893441	0	1.33851785681734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155510459-1	1.29422006845473	0	1.52479117367445	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18687726-1	2.36254405523796	0	1.34953584113586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27381449-1	1.88907328139372	0	1.37629362583528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55203470-1	2.6061872877594	0	1.35398951784117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-74999671-1	0.923677277407109	0	1.94990345233361	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74121414-1	2.41114250521368	-0.71991524108515	1.09957394175127	-0.654721991627552	0.512646763476253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18774197462428	1.26501898168246
Merged-chr11-76777830-1	2.11346549762314	0	1.40472684304775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143058459-1	2.4167464293479	0	1.37551141288725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34080728-2	2.96456297142423	0	1.39268371019316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32934868-2	6.09710507347829	0.340285262600448	0.783166572673081	0.434499216991599	0.663925963288598	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56838124654659	1.93987555334551
Merged-chr17-84291474-2	2.67632834395767	0	1.39509854801335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136981454-1	4.69503558499196	0.556053661400464	0.904049530374119	0.615069907917937	0.53850855396536	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43459361143186	1.57664565284388
Merged-chr7-89670155-1	1.92793959331259	4.13421105351892	1.46593848808438	2.82018044216938	0.00479966518383139	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	3.24389189810066
Merged-chr16-57499596-3	4.51938473594578	0	1.32707556154568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65769627-5	8.25451400177154	-2.49667190290838	0.770787327176382	-3.23911903437024	0.00119899522700532	0.0218385600272429	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43347704503419	0.989878296978726
Merged-chr1-92753943-3	5.54767751874241	0	1.3429632885877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129880144-2	7.35970495285597	-0.0899235604839239	0.58074776602744	-0.154840992500133	0.876946673574633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70487951786644	2.54285623109253
Merged-chr4-124843695-2	6.46196003908322	-0.696773153004648	0.599430405059686	-1.16239207608308	0.245076240498142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48524888464658	2.22687404814607
Merged-chr9-50670876-2	3.52199661583812	0	1.31691001826103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88344336-2	4.25688271218705	-1.91098116498544	0.98676765694576	-1.9366070133473	0.0527934000106341	0.385629054001218	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57020383716388	0.887107926668329
Merged-chr7-123084954-2	4.29382822281212	0	1.32380695284142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128355555-4	4.25591817093275	0	1.42807920614437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61389615-2	3.35867031152064	0	1.36618501986781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83896090-3	4.43063159226967	0.845122991184492	1.25237593094387	0.674815740468241	0.499792838636694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.733321818366247
Merged-chr15-77799628-4	5.47949010337387	0	1.32784116732779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41393614-3	3.95221753365487	0	1.31796165403074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174106782-1	2.97263452937336	0	1.35301311544194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21859738-1	3.24189502904722	0	1.33048870915401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41788247-2	5.95487621853246	0	1.33703270379452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45297459-2	2.85987390694691	0	1.3729492061292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149791732-2	4.10261732869872	0	1.36486212354321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100503656-7	18.7160381979646	0.612685997125133	0.473035486030023	1.29522206096446	0.195243636587618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71456219590561	4.37294042980751
Merged-chr2-181072319-3	3.46645004627497	0	1.32700203910271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4337258-3	3.29174172340606	0	1.39090232221064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122199480-3	3.66287784875256	0	1.32509114625841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9188794-3	3.83316430005229	0	1.34825480898932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-163910514-3	4.24534663925663	0	1.30467323059973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80684390-4	4.83270696848832	0	1.32187410265809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122715947-1	2.56223455580465	-0.414796088403079	1.34072580408844	-0.309381744677539	0.757031155318665	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr11-99194759-4	9.93586561258801	0.969768380477641	0.512337613694142	1.89283073222997	0.0583803832172765	0.41590558319565	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46074791146485	4.35269597941206
Merged-chr1-39782084-2	3.19167774679961	0	1.37554324334718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31082152-2	3.16752569026692	0	1.36672153466983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24573370-2	2.35013529193573	0	1.40123778582823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84528926-2	2.78662740275964	0	1.34267601785707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84837970-2	3.0232220768471	0	1.31900683499561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84620629-2	2.99379382083982	0	1.34776664707881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131862262-2	4.93309381788336	2.05271233472345	0.837716730708473	2.45036568982863	0.0142711193309042	0.144493424821393	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925723919317708	2.55100800168893
Merged-chr9-90277977-2	6.9371987071318	-0.10557799299595	1.01063392547718	-0.104467097664568	0.916798677640629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64753773079647	1.98095685408011
Merged-chr17-30550180-1	4.17261431184957	2.20873573141213	0.918845001824565	2.40381753943941	0.0162248691555115	0.159241559002111	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	2.22017310661124
Merged-chr1-156982109-1	4.70366053022197	0.391047264098311	0.93365069825471	0.418836792849085	0.675335413416094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73890503117431	2.2225961074789
Merged-chr2-150875630-2	5.18091682951339	0	1.32041607101195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91041072-1	2.91530393441552	-2.72912357757082	1.25213633615409	-2.17957382017463	0.029289067159926	0.251567216434349	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97783374217336	0.581381506691384
Merged-chr1-135685145-3	4.3561219507354	0	1.30152453983036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35182894-7	13.7796847565345	-0.1029713883926	0.482725955320495	-0.213312309515726	0.831083372896882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75625417465322	3.08908924330361
Merged-chr8-119836899-3	5.89422009542026	0	1.29699585466454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127732913-1	4.77620432910223	0.65045192028832	0.941324567697883	0.690996434820643	0.489567781512963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43459361143186	1.92049674076937
Merged-chr3-67564922-5	9.12776022896542	-4.11410327946766	1.03852694074783	-3.96147959002889	7.44867501073042e-05	0.00251156407250356	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00581135685751	0
Merged-chr13-34279176-2	4.20090552531393	0	1.31990433545696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134551133-1	2.95136148929906	-0.239186065374035	0.861769766608035	-0.27755216606807	0.781356155743485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69019777312752	1.27663763006505
Merged-chr7-104231398-1	1.78107199359355	0	1.41480498057659	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118279165-3	3.56894797383623	0	1.34413867315232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104146453-1	4.02180704773135	0	1.33329156478425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83643593-3	4.05294200511022	0	1.33981566885308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54888238-1	1.97934254337324	0	1.42558614219632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80056086-5	12.8481866822877	0.325098084744645	0.45138596331432	0.720221963389376	0.471388343060987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74619962040631	4.07611070287923
Merged-chr11-115579192-3	9.75708681773349	0.339595266978929	0.696311841479207	0.487705718543449	0.625758300635055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86732191137563	0.993458951033742
Merged-chr6-72428204-3	3.62261113436504	0	1.33002758554461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53951101-2	3.28348893929593	0	1.34685458933167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101988364-2	3.48657202534363	0	1.38179735135584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11954425-3	8.83553047684067	1.96012993634597	0.507400205094621	3.86308463549091	0.000111964194279121	0.00346398712759736	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6711971356263	4.95786256041652
Merged-chr5-105650923-3	9.76989732605773	0.280804683705315	0.590744556507481	0.47534028136535	0.634544452324162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09281127455492	3.56170723725796
Merged-chr12-54830759-3	4.47181323837334	0	1.31442658478944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121488298-5	10.8153706023902	1.81052929759505	0.566286089224646	3.197198963644	0.00138769172923327	0.0244436870419503	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53126094133664	4.43114946799354
Merged-chr15-94688288-2	3.93184940890401	0	1.31641998758094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121641410-2	3.96112607948945	0	1.33158283657826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12077375-3	7.14703020322493	0	1.29284604887623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61907148-3	4.2238280561922	0	1.3282563674293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165873950-4	9.95259317521397	-1.26780197635186	0.565670420449709	-2.24123788432132	0.0250106701008957	0.222966882457453	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.08229008066249	2.42844712608471
Merged-chr5-134187537-3	4.13667290506404	0	1.31829639177463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120745005-1	2.49274504368086	0	1.40042989342652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35462400-1	4.66882908549294	-0.90503948172527	0.806592613608662	-1.12205277665036	0.261840000782137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43787532728782	2.55996558715718
Merged-chr14-47504494-1	4.85447433438619	-3.75740887127591	1.06615676265231	-3.52425553436296	0.000424674484652659	0.00972346842120275	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32490741288461	0.306240821987646
Merged-chr13-87039344-1	3.61083044107308	3.2708198494086	1.05052908154138	3.11349767167751	0.00184883968710948	0.0305472258391546	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13678924317249	3.99778999098554
Merged-chr1-34184443-1	1.47724925720601	0	1.64844949634798	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103719350-3	3.98187095607673	0	1.32082111055812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101974027-1	4.40937124519169	3.29349130567377	1.00489160532998	3.27745926844746	0.00104745841876763	0.0197197400843531	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.879261964366974	3.33585072537423
Merged-chr3-55307701-1	1.84324729720527	0	1.70950091834749	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34178559-1	1.64186685310585	0	1.52879846214217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75262544-1	2.43644054110307	0	1.37203904804782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103026399-1	2.38927171116295	0	1.38539557747585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45229606-1	2.8324416025492	0	1.33113498079946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129657894-1	4.51587941448243	-1.98183968243435	1.01107560197241	-1.9601300620529	0.0499805903355786	0.370550448839201	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44414963727959	1.03338881410105
Merged-chr1-154058057-2	3.71388783574491	0	1.3660360303222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115846422-2	5.12559191016772	-4.72546723616711	1.1599568258867	-4.07383027601467	4.62461896232291e-05	0.00171121376394084	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40661839444776	0
Merged-chr9-44194110-1	2.31738232176469	1.17156832521773	1.20588892221435	0.971539172170519	0.331279856331099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	1.34591112769102
Merged-chr2-52286675-1	1.31347527716168	0	1.50454007569606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67743086-1	2.81892597011687	0	1.36059984611619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38118952-1	2.55364059450759	0	1.37145559493845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-6389792-2	4.29608687346082	0	1.3123768495997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119058866-2	4.50132071570569	0	1.32276987307045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139289071-1	3.00400675727811	0	1.365830520832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90819961-2	2.86396544396673	-2.72101000103734	1.14001464861576	-2.38682020826773	0.0169948002652749	0.165038225313516	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84631694410035	0.61242769162773
Merged-chr12-98239108-1	1.72049300244374	0	1.41730416088362	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8916745-1	3.85804429999236	-0.0494836492952226	0.982922620198698	-0.0503433823562016	0.959848753457602	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1323455741316	1.47954504644696
Merged-chr10-12592135-1	2.91122068140332	0	1.41813030465194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95711514-2	2.79819792681868	0	1.47887042211963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92551112-1	2.07204139865282	0	1.3788382619128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56513393-1	2.24499951794562	1.04608410397291	1.49753708054418	0.698536361846064	0.484841826065954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	1.31495854024319
Merged-chr11-8609379-1	2.27001557843023	0	1.35588750801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44348772-2	3.44748011474602	0	1.34654613053583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144724831-1	1.60127662071438	0	1.55175423393311	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72270345-2	5.44190989474874	-0.94800079804403	0.764252231237715	-1.24042921864779	0.214816679334954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41105378131432	1.35032549026822
Merged-chr14-8176424-1	2.29306423906562	0	1.38257956962297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73812184-1	2.96727666128693	0.551307816200772	1.02506369131305	0.537827864622324	0.590695892887332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23172330808469	1.21653520045322
Merged-chr11-98362519-1	1.75138162394504	0	1.43898439552241	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72216737-1	2.04215782645516	0	1.41629223060388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12795034-1	1.92300617549883	0	1.48175599420229	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79323822-1	1.63011482774176	0	1.41056439611676	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53870086-1	6.30942672427495	1.43817774057415	0.574278446232058	2.50432129224122	0.0122686566523094	0.129612000028515	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22832333597801	3.69900421551142
Merged-chr12-3377395-1	1.97906015766631	0	1.38065200721133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93586267-1	2.08692477551239	0	1.39745531962181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83574847-2	6.43767984982986	1.3253733061705	0.769215546917392	1.72301939486519	0.0848850177746213	0.54789573009684	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40679061316474	2.62606662475342
Merged-chr10-75486671-1	2.56401466174046	0	1.34623436566945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138517564-1	2.60442994840277	0	1.3735320822076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34282498-1	5.11817058715959	4.56566011656575	1.50724008394994	3.02915253195814	0.00245240829229786	0.0380021513560579	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	3.59691053465216
Merged-chr15-57977041-1	3.18292444862054	0	1.32924308946952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67972762-1	2.36503724597244	0	1.3611281767807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37236848-1	1.4075852460205	0	1.41581520693732	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65524251-1	2.71631705779005	0	1.36968598552283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100070394-1	5.05951694163228	-1.52527109743318	0.807300502056038	-1.8893473911494	0.0588452952556944	0.418104236574819	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79989783301668	1.34591112769102
Merged-chr5-45677870-2	4.61793893866895	0	1.31979670280488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24830484-2	4.51639402431951	-2.45063352424829	0.762975048625601	-3.21194451727194	0.00131839834272792	0.0234938800392415	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70189246526019	1.15307255889252
Merged-chr2-167920142-4	7.15041330923699	0	1.30513433849462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16698828-2	5.52630149451311	-1.47167527189242	1.00046736717878	-1.47098778048343	0.141294421525529	0.795059439335852	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08597076740639	0.845523456341755
Merged-chr9-107306331-3	5.80118440618858	-1.4822991449559	0.851843717003668	-1.74010691793306	0.081840245755067	0.533866546019498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26006820209669	2.08137696679909
Merged-chr1-53909296-2	3.40726893012106	0	1.32987150460981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121136969-2	3.05712772449965	1.83158492636082	1.41254731920095	1.29665385468071	0.194750313458146	0.998991599280634	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr11-113787393-5	8.27446713624722	0	1.29474103503765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29486060-3	3.93354960281774	2.4907503923995	1.21843341460266	2.04422364205413	0.0409314586095357	0.321503025618196	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr17-69218592-2	3.49765781443274	0	1.31936622226614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23491003-1	2.94770604015637	1.91469282439381	1.2979929292558	1.47511806978147	0.14018080319478	0.790222115732066	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.688405034366054
Merged-chr5-104948138-2	5.44670969735411	-0.532483787357256	0.725457051906543	-0.733997672167991	0.46295015682307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2434438667136	2.31653289104558
Merged-chr13-113914433-2	2.80976116039632	0	1.34483538760348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79650765-3	7.23281482076629	2.97149326559534	0.725757917410174	4.09433117340138	4.23388784229621e-05	0.00160108585036278	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.984600738149972	2.92326567439373
Merged-chr17-15724098-1	3.87592011323313	1.55666087687	0.936141007809991	1.66284872031367	0.0963427213339357	0.602623860274467	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	2.01927470790114
Merged-chr3-38235554-1	2.60418876442233	0	1.38927773229464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72155332-2	2.92603189941437	0	1.40206360265004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120197074-1	2.41679600540433	0	1.36395617365905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24227845-2	3.47584015376488	0	1.34275945033208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113645310-3	7.70114912993284	-1.77428365526327	0.648697580716392	-2.73514763736876	0.00623523030985272	0.0772412056545281	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.09337664895709	1.88169983067447
Merged-chr10-99128096-4	7.68203899538516	0	1.31845162537515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79812425-3	3.5008454611552	0	1.33346808334705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79368427-2	3.7821348672168	2.51125161406907	1.30598633955099	1.92287739773179	0.054495448934739	0.394358760364281	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr5-140835733-1	1.26236927573844	0	1.61378902351707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182412999-2	3.08018672027855	0	1.3600500530826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-77049646-1	2.27893287981634	0	1.39304331613282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3795286-1	6.1084132945332	1.19432975740453	0.88549670792178	1.34876815093708	0.177411447614866	0.934326922617748	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.776413893355052	1.40646071772112
Merged-chr16-44777625-2	3.00008824363769	0	1.36692779635126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21935978-1	2.78238695008764	-0.619781636184337	0.888019956566586	-0.697936607844538	0.485216839226062	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54198975169782	2.08137696679909
Merged-chr2-181890172-1	2.85911954006737	0	1.38136893048744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74693220-3	8.67960126824316	-0.945871447826425	0.786434366162686	-1.20273412318143	0.229079224619749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72484741576384	1.45547307112966
Merged-chr3-51727935-1	1.95123557059944	0	1.3969134832582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130163902-1	2.28091336420658	0	1.37854854916001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77871665-2	6.27715694189464	-1.14383057304306	1.20319735392754	-0.950659149398322	0.341777431734801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14549025614049	0.306240821987646
Merged-chr1-6499041-2	3.77467907614409	0	1.35241921587774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50149652-4	10.127029517907	0	1.29566249958917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61152413-2	9.77988660671353	0.613038478583816	0.544060899067214	1.12678282823644	0.259834312459063	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73806652673817	2.63474810522905
Merged-chr9-120434040-2	3.23854644463939	0	1.32052921863731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-33169212-3	8.18201294934424	-0.892796317463115	0.648720932387838	-1.37624095799849	0.168747045426827	0.901291394204494	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.28690255662484	3.13634941273677
Merged-chr10-29206915-3	3.86507109668712	0	1.33376170548675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192745232-3	6.70615572231954	-1.52859057635716	1.15601509223832	-1.32229292387303	0.186070628158043	0.967698278575691	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.674898740693665	0
Merged-chr11-24049457-2	3.54039782983821	0	1.35768710562337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38025096-2	3.94912518157343	0	1.33088302746066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-7187718-5	11.8048190520845	0.116533572769705	0.387446347276113	0.300773445378896	0.763587258834631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.16536134593225	4.28016880277167
Merged-chr15-80006379-2	6.25979928675462	-0.808872716915801	0.677921696686421	-1.19316540666783	0.232804599807884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99295685550257	2.01585784396829
Merged-chr6-134469386-4	8.44601440801125	-0.355260723566434	0.592502156200772	-0.599593975901166	0.548776862893944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91691547888194	2.25496984757238
Merged-chr15-19855547-1	7.12664208584957	2.94291742091819	0.944092483980015	3.11719187564307	0.00182582695937325	0.0302588101666763	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10987490261069	3.96957983505352
Merged-chr4-45819249-1	3.36342607337569	0	1.33106758211896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139116506-3	10.8990667427439	2.70376127504645	0.534419003398976	5.05925361532836	4.20900743724049e-07	4.06866568038339e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03150113387705	4.92412230323714
Merged-chr6-124260755-2	2.91034743710834	0	1.40878255308808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130886486-1	1.71535666301095	0	1.57995565606409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101628606-1	1.00730573736355	0	1.57718404067084	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-61138606-1	0.881872646850327	0	1.57542890213121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129427972-1	3.36262727093	-0.0394388933948775	0.745559834892215	-0.0528983611363388	0.957812890193648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08337589240111	2.20584205260395
Merged-chr6-91510424-3	3.73121626530536	0	1.33961894497316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133139125-1	5.83459469853324	0.759894888748729	0.912631619953864	0.832641420847487	0.405046991080195	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76956838203344	2.0532959332
Merged-chr7-88315910-1	3.07736100024063	1.32821998883379	1.05924667070084	1.25392887754368	0.209867857702431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913467560099968	1.47158896970822
Merged-chr7-24850402-1	1.4615839309277	0	1.42190287586357	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56753861-1	1.96742931769562	0	1.38625354915034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100497283-1	1.7983859503467	0	1.41857004767693	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50112599-1	1.09794380335818	0	1.60836278949129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8098469-1	2.42172941213479	0	1.34533458862775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34593677-1	2.7590039338357	0	1.42258907614557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80775038-1	4.23701862551177	0	1.31447491849303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117348470-1	2.5113935493755	0	1.34637814945156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-12440615-3	7.79382381417918	-2.42669827136397	0.786830398620315	-3.08414402343773	0.00204138745349751	0.0328967952000613	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51065784176441	1.03956264035389
Merged-chr2-68451249-1	2.30912006322741	0	1.36773571921282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120367112-1	1.13653039797886	0	1.66691075114546	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135748550-1	4.06461747853026	0.916048121152116	1.1348528069946	0.807195537171083	0.419553836522797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99226540376539	1.84977299032034
Merged-chr18-66041355-2	3.39251755239639	0	1.34343597799937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78306232-1	2.39770182327237	0	1.41054367528607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29243293-1	3.01694092050141	0	1.36695648468049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45967675-2	2.8830232091737	0	1.3169687926848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134589191-1	3.40754374838813	0	1.33972216490515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83875401-1	4.39472619469346	0.943804995531784	1.14508536869526	0.824222386674258	0.40981320912032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0.733321818366247
Merged-chr3-136152497-1	2.74959109389954	-1.16511764408737	0.90718236610416	-1.28432571842297	0.199028011682404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73849552183471	1.60308582214967
Merged-chr5-90977450-3	3.76153617019619	0	1.34926530759908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98782795-2	3.97508372772634	0	1.33518876436014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12226648-1	4.59974902106636	1.60794441156166	0.76553982853166	2.10040595098203	0.0356931459758175	0.291368434345505	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06730713601254	2.84007006085556
Merged-chr12-55480769-1	1.62090310348244	0	1.6266362902737	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90803111-1	1.6325716215734	0	1.65125975880565	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117268710-1	2.0195840620218	0	1.38911165874613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150197862-1	1.27789989708306	0	2.16977261979234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-14056326-1	1.79733642961265	0	1.35417783552616	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152816449-1	1.17089978225432	0	1.54535244647421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-33308466-1	1.48846080465627	0	1.60882837738946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94603623-1	1.84110490520918	0	1.54771537985539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116333433-1	2.18444322261011	0	1.3638053932833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99007708-1	1.38819632786602	0	1.44483656027772	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137033803-1	1.40504558467978	0	1.59195887555894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104672219-1	2.06968247924434	0	1.44662108739319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46908722-1	1.66197012076099	0	1.50433781244713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32931385-2	2.03979406510607	0	1.45504700432882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8609720-1	4.2609970628309	0	1.31568365692837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38091234-3	7.96053581148536	-1.85984656723943	0.667445511935627	-2.78651445545836	0.00532782417708387	0.0683946196066603	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84455283296765	1.63267172601457
Merged-chr8-122702364-2	3.21067271301095	0	1.37936139924215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36029788-3	10.3560058978707	0.874788845027587	0.494933425390757	1.76748790877668	0.0771465521933018	0.511643012242312	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14555034169355	4.06995268231939
Merged-chr11-107326384-2	3.53645034873594	0	1.35143274221511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71189283-3	4.72681315977118	0	1.31958360463918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34602547-2	2.93801822705641	0	1.34294339709481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-49688777-2	2.93538072097516	0	1.33245170329861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127261280-2	3.52594618078706	0	1.3150997810562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149426559-7	13.6723820354515	0.938692765527868	0.39821844269399	2.35723076806165	0.0184118010307144	0.175743142003077	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6436781091455	4.51587914695551
Merged-chr10-128612822-3	3.44390413947028	0	1.31130040473091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15774977-2	5.05299881423191	1.70685995556353	0.90488012325235	1.88628295804385	0.0592568345301248	0.419795870468944	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	2.02938698498506
Merged-chr4-136454939-2	4.55623207629319	0.444871028740574	0.909009862159356	0.489401762576901	0.624557288463514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26615546658367	1.86449426151314
Merged-chr1-181950895-3	3.8029631711495	0	1.3414415827937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153586703-5	13.8433444515241	1.27992324092308	0.446329563006039	2.86766404694946	0.00413514366862046	0.0563770286187509	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02006332749117	3.37442501174292
Merged-chr19-37546979-4	10.4041453900444	0.0499510687402111	0.518417846709732	0.0963529111839763	0.923240289479125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36927196770612	2.13344196072648
Merged-chr4-133094083-2	4.30845487603126	-0.857015719541473	0.834763384545299	-1.02665705684767	0.304581976968475	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80988533903419	2.01966053530494
Merged-chr13-23427071-1	1.91690777892367	0	1.38788377116154	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10970794-2	2.77194071607243	0	1.44316353677067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41473705-2	2.45241131762281	0	1.4084308776505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92690788-1	2.30902307820053	0	1.35114009962154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65906602-1	1.86899988453795	0	1.47014552195199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60684278-1	3.24899160393711	1.87941149567672	1.32839714575072	1.41479639706287	0.15712820080331	0.856641032011771	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr13-46838807-2	4.51259437318508	-0.853906349032261	0.737985473579562	-1.1570774488154	0.247240719257582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01380187721942	1.99468681090207
Merged-chr16-73435107-2	1.74061103444296	0	1.51584694999411	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43299652-2	3.19482837018764	0	1.31990542834008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48320438-1	2.62651752599029	0	1.33134985397197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102057217-2	3.17110468380002	0	1.33786862242553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99328515-3	3.10003476367159	0	1.36523998977038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81658215-2	3.32269531584017	0	1.32522940530158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25326104-1	4.3415082773646	0.551694770005024	0.893819654749889	0.617232757271824	0.537081212224555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49717830762124	1.52696130946871
Merged-chr16-94599497-2	2.43375469366594	0	1.382912266927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191272884-1	1.39755716065542	0	1.45485413643851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75365690-1	1.88827711710356	0	1.4628217429237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28311069-1	2.03323358233821	0	1.43608585143999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60813670-1	2.22183849367664	0	1.36845115229203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77371939-1	2.04791000205337	0	1.40772561276298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113061370-3	4.85603110605771	0	1.31202652311301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152520999-3	3.95928295392944	0	1.30965579928706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87637422-3	6.09107053928715	0.470636968242417	0.801489190847635	0.5872031383788	0.557067284863963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32986794227724	3.39472255525023
Merged-chr18-5141547-3	3.58187545982806	0	1.32511599328972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133085491-3	7.37704572923982	-0.0138172142481296	0.559839099009718	-0.0246806882058977	0.980309658967961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80875447831909	2.77917504929676
Merged-chr14-12993841-3	4.39789783385333	0	1.36125554783836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62213698-4	3.73657587740735	0	1.3178755833786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98814123-2	3.34907507411728	0	1.35390124037736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38248055-2	4.18992400270515	0	1.32363095206848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69457367-3	8.50877454608385	0.79512989291401	0.693920456625406	1.14585163951038	0.251856544131883	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07300799856902	3.93355916516178
Merged-chr18-16252150-1	5.20286865543737	0	1.3323160588166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31124470-1	2.43248290030098	0	1.34036665018107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107116220-3	3.72669474412597	0	1.33781367495623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83289421-1	4.19951613897116	0.782681601840668	0.768902681941955	1.01792023909178	0.308715862506927	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43088467128195	2.08153858449613
Merged-chr15-80038027-3	9.36700853719067	-0.297504152099216	0.548525554571186	-0.542370632726114	0.587563206272275	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36111794453852	3.1819016518161
Merged-chr8-106198959-2	2.79142972621027	0	1.37934749285227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74508819-3	4.16253535803521	0	1.32365562763717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98153848-2	2.73331334258189	0	1.38011049080271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38451184-2	2.78529180639962	0	1.34506083680276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122849542-5	10.2068559035407	0.562156231290175	0.553611900120888	1.01543379245898	0.309899091593376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6488534607403	2.9338379668399
Merged-chr19-55545731-4	4.28938307862345	0	1.31799861233569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66212985-3	4.68103024112406	0	1.36620980993501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105504809-1	3.94217541344436	0	1.33566304629067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6238398-2	3.37770209148181	0	1.32453248067347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97223029-2	3.93935580541561	-4.83347096031643	1.15205820184568	-4.19550935236853	2.72259051490934e-05	0.00112459165478676	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49975490246046	0
Merged-chr3-126793598-2	6.23074153977546	-4.32574986797573	1.06861564231353	-4.04799414933753	5.1658437406465e-05	0.00186707535993521	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62512390912262	0.423054662900563
Merged-chr8-86903295-7	20.2580333906337	0.522978044615825	0.367644004783298	1.42251209814801	0.15487764192304	0.84876168979394	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.42554807004711	5.00099867613939
Merged-chr4-53395073-1	1.60731753386865	0	1.43885993099631	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95229627-1	2.25221271663946	0	1.47252370541882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76611048-3	4.05644249966891	0	1.32717098766679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-93651201-1	3.72501838403017	0.492859721571853	1.15221666311082	0.427749170230887	0.668833747204532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.709714069046076	0.890396206374751
Merged-chr4-154906318-1	1.85348804294163	0	1.47319771024219	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43092193-1	2.95843757112312	-0.592749657315033	0.993089722028564	-0.596874224117671	0.550591357636702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05568350297265	1.34557707159302
Merged-chr4-155835797-1	3.29319502405049	-0.0304844715945503	1.25932329594425	-0.024207025862801	0.980687473945528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34219002218307	1.65013357957091
Merged-chrX-159237457-1	2.034476540523	0	1.39724071345625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62557939-1	2.23687307976937	0	1.40949355034137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21452034-1	1.63644789788728	0	1.39710012218877	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69332136-1	3.87289525295547	0	1.32172932802306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60037373-1	3.2229114183214	-2.53120282547916	1.2083509312847	-2.09475803754131	0.0361925070892489	0.293756746771092	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50053253611789	0.563523181795778
Merged-chr12-3698989-1	1.52993040353728	0	1.47307153286606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119026493-3	3.60218918242478	0	1.36848321542314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4620314-1	2.42380472090066	0	1.40923427550011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49323160-1	2.51520452409887	-1.2125057575211	1.25826175337504	-0.963635550606855	0.335228676767451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53277528327777	0.733321818366247
Merged-chr8-33593954-1	5.61456850802311	-0.418128471572342	1.04007164607429	-0.40201891201491	0.687670108033818	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.947437291748982	0.733321818366247
Merged-chr5-135101244-1	1.37828848638314	0	1.56835698426508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159510341-1	3.14293532531233	0	1.43423942451303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114015538-1	2.84489308875353	1.84753453053461	0.96845276877742	1.90771774328959	0.0564277071762817	0.4053787327552	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.878893210046761	1.64143129445672
Merged-chr1-88745435-2	3.95624676662483	0	1.30160206113936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104793533-1	1.68460060196764	0	1.51460198520282	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57216618-1	3.30311620470695	0	1.36156705775739	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60668154-1	2.36728360677098	3.69220053928298	1.20035483859295	3.07592423554603	0.00209851161113034	0.0336018965304884	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.47158896970822
Merged-chr1-156522347-1	5.51310707687661	1.16296272320704	0.823699225562038	1.41187788833176	0.157985919441507	0.860240637598924	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82207432646442	2.97817938885471
Merged-chr16-64748435-1	2.49443121906437	0	1.38941313971656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55335176-1	1.80025929337892	1.27795461642184	1.39526158503839	0.915924748538595	0.359706365282652	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr5-66138225-1	2.43994252088601	0	1.3892939368345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63278293-1	3.19604874706444	0	1.39656600015458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-114119481-1	1.97017173855451	0.224935257220588	1.52081958070853	0.147903972354034	0.8824185532041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67440742498675	1.86719832675847
Merged-chr16-50415478-1	1.85079368467587	0	1.49597859493545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152464419-1	2.23359236201488	-1.00639209528878	1.25843275782978	-0.799718609538059	0.423873848396081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.856023420615499	0.423054662900563
Merged-chr3-159528641-1	1.70598050571408	0	1.42416828083935	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121102213-1	4.68520033445638	0.0945360032466503	0.826478664839786	0.114384081850408	0.908933332014667	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04896145576073	2.63489024549046
Merged-chr8-25362872-1	2.432694822956	0	1.36305314449087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17386343-3	5.09836968185145	-0.409329367677355	0.729015756162187	-0.56148219598465	0.574468864132256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27891886865871	1.69757189012738
Merged-chrX-137019479-1	2.3560061673566	0	1.35713168900717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160181383-1	3.91335512232903	-4.77707760190566	1.10882671453443	-4.30822737158838	1.645681630069e-05	0.000755187582854558	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34138924226433	0
Merged-chr18-27022087-2	3.72606116759895	0	1.34960557191477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99208156-1	4.48880393968853	-2.88665397261404	1.07605998699662	-2.6826143593267	0.00730491716218599	0.0867746076859127	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70069255907859	0.688405034366054
Merged-chr2-122573856-3	5.95061715075021	1.68134336255162	0.547734809039345	3.06963029335395	0.00214323897206716	0.0341757183671793	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82920644795851	4.35476561952894
Merged-chr11-72940322-1	2.17797607079409	0	1.43351395620284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97746423-1	1.71789040848694	0	1.75052679750054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82861910-1	3.64923789588303	0	1.35259696564548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79588415-1	1.24921487177127	0	1.5095622586864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146453863-1	2.1452363704868	-1.64897078099965	1.48658669789913	-1.10923283743223	0.267329750120269	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0
Merged-chrX-42450507-3	3.82393623748443	0	1.32886302149026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117114612-2	2.6859445837596	0	1.36031078493871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3661408-2	3.00634904980736	0	1.34122344769909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138258844-2	3.26896841465334	0	1.37918786780147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170908026-4	5.09739719755045	0	1.31672085550998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-84466943-2	5.88695874598005	1.23737236857477	1.08988589822663	1.13532285406034	0.256240069947137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0.898163539755574
Merged-chr3-8957846-2	3.53878242051794	0	1.30946929626614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112383427-1	5.38299611395435	-0.929144457075186	0.708086630201713	-1.31219036971578	0.189455910369947	0.979987803295701	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56189559156156	2.87613034754277
Merged-chr11-118469987-2	3.95486192533991	0	1.32058863304576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49753393-2	4.90470286878209	0	1.31836745072743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130932315-3	8.07528105556653	-3.0201214588933	0.841481544730625	-3.58905252029039	0.00033188198056103	0.00809826732701309	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89137901216631	0.773587911294612
Merged-chr3-97231478-3	4.19450304369581	0	1.35023958144125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4044707-3	2.93153045691	0	1.34938794771242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64882838-3	3.49973518020138	0	1.35269105265066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65905694-3	11.9939354970642	-0.03996018217623	0.445425621945114	-0.0897123564686944	0.928515796496939	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78562048975195	3.39223617595758
Merged-chr12-72104717-2	3.18191715238133	0	1.35763752903324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149990516-2	3.0213389743235	0	1.36143424705141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15990321-3	3.71429206379506	0	1.30053829500337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120342122-1	2.98168959868046	0	1.36260900946481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109124831-2	2.8001305857931	0	1.3715593575397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8846447-1	2.50348129441197	1.87522360540183	1.33510484543514	1.40455156897484	0.16015466678673	0.868647647397548	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr2-72202394-2	5.97849230124951	0.989336300537312	0.819355261710249	1.20745706626971	0.227256169898458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.991619407088926	1.93177134892138
Merged-chr11-94611604-2	2.9067565060102	0	1.42702407956287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-74980887-1	2.08991354191264	0	1.38293525862043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25420797-2	3.09430496532036	0	1.37533362493316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-9972117-2	2.23043610638777	0	1.37463980661712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77831061-2	2.33910862451805	0	1.44475172022513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26233083-1	2.09804379595144	0	1.3669011711436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52799046-2	3.78471277616059	-1.66008355715929	0.934252202335734	-1.77691158020168	0.075582788777976	0.503982950559757	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76653873083216	1.10459859746439
Merged-chr8-106964860-1	2.6758083506553	0	1.38828128717391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37452275-1	4.2980379635454	2.30672006281232	0.882571949180934	2.61363401018247	0.00895849435869983	0.101950848548171	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.659012160579651	2.13939166524368
Merged-chr11-80094695-3	3.57089617874903	0	1.32651958641296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52390465-3	4.13770410544312	0	1.32617854786556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155163764-3	6.92892094436008	-0.534680489876974	0.57043079188997	-0.937327538202229	0.348590101785756	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.20349732714994	3.76322113178887
Merged-chr1-184174615-2	2.84730323570238	0	1.36060954743669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75229967-2	3.51566230141328	0	1.33435039753848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119772966-2	2.59746623673008	0	1.35187145938926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6360338-2	3.39336400892533	0	1.3170443851425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82236742-1	2.37543096299723	0	1.35141343141158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39313845-2	2.37532468595026	0	1.34893499196649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57563066-2	2.81437884719586	0	1.3514580578261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-112752729-2	4.48921061067894	0	1.33636145752743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32572696-3	3.33358949251342	0	1.31367173507906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181277010-2	3.06782200573189	0	1.3687378882773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-55980272-1	3.26772290510272	0	1.33112637172555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142314252-1	2.07574409691926	0	1.44359693908462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26350797-1	1.89597905969436	2.42964467985651	1.40012326320081	1.73530770019642	0.0826863185920756	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr9-104724531-2	4.8088588170231	-0.915522540960337	1.03514306672518	-0.884440586417414	0.376458421752375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06326522502853	2.11539020246932
Merged-chr19-14641933-1	1.86834131896114	0	1.45233060461769	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127055573-1	2.26620063213459	0	1.39410558535134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61301498-1	2.40266088971918	0	1.34875546748977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41366679-1	2.38791166813257	-0.189156373774864	0.937136663393051	-0.201845025559019	0.840037880608588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17561467557161	1.26514550294121
Merged-chr11-45627297-1	1.50777961923265	0	1.40481343880792	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119087848-1	2.31933624433865	3.64362477805241	1.18904491073511	3.06432897963442	0.0021815886598394	0.0346519427724514	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.02326711107977
Merged-chr2-179937261-1	2.51983882008439	0	1.41409656308008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49355647-1	1.4533281704841	0	1.42902816258897	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137865265-1	5.13064252839236	5.19479435617161	0.981280217134354	5.29389491957969	1.19738253100117e-07	1.44361916735798e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	3.80085851684469
Merged-chr18-32894426-2	2.15833603022863	0	1.47230946360012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95656836-1	3.59538115552403	0	1.37714693252038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6231162-1	3.12235401629283	-2.18570464662065	1.2044326907731	-1.8147171389193	0.0695673898200573	0.473150732497337	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2488973256029	0
Merged-chr8-27677338-1	1.33883996590766	0	1.50048156464594	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-111328206-1	2.75435892662748	0	1.35359162995624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35706197-1	5.8555255483191	2.02122343480892	0.683612908883417	2.95667827295757	0.00310972406383799	0.0456237154637533	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27710902400056	4.4837335648192
Merged-chr8-117338387-2	4.25293655305003	0	1.31999938423109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-61846533-1	3.0372380133946	-0.472646895385566	1.00469972391791	-0.470435976176485	0.638043566022779	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.634922737593	1.34574950999398
Merged-chr2-156416544-1	3.72234322981841	1.26246243932025	0.978285774950616	1.29048430596262	0.196882557415675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1339288555862	2.62104760959876
Merged-chr5-36574328-1	3.41919112123176	0	1.31725923615499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119598236-1	2.16524300107354	0	1.42500235477095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52860080-1	1.49511650749863	0	1.59538243579875	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110558020-2	4.35255903058693	2.50387845073288	1.26996031503685	1.97161944439203	0.0486530657888739	0.363720768452094	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr13-107953940-1	1.37830184775831	0	1.50107121665037	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19080240-1	1.06107980708198	0	2.03290967101684	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122258134-1	1.42770364961375	0	1.49293253780586	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23899811-1	2.92432200101892	-1.87567152425656	1.23584953522888	-1.51771835550287	0.129085414724147	0.746611392331751	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01232198676925	0
Merged-chr16-32598284-1	1.68668381268888	-0.352108352022476	1.41992641894528	-0.247976477741729	0.804152606531314	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.306240821987646
Merged-chr13-97959329-1	1.02970740135418	0	1.48780988475358	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25825903-1	1.8522181437048	0	1.39313916878218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67917282-1	2.46580613023392	0	1.33022611720155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83661764-1	1.68290024885925	-0.828287463336307	1.40202088293201	-0.590781117043088	0.554667088726932	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15569384263315	1.31734301959449
Merged-chr7-110552492-1	1.8676050434367	0	1.38671127852476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66894235-1	2.20737889588151	0	1.38804328754545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73948752-1	3.22217661152015	0	1.35517381964629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99150682-1	1.81551163439603	0	1.51437950329324	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73793285-2	2.25111235236684	0	1.39180660238073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116477661-1	2.01741979500895	0	1.41380460439396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56339108-1	2.46689320315687	0	1.46492577091952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54064642-2	2.76600490809144	0	1.33657437896075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33965823-2	3.22755751970546	0	1.32948189449869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95966596-1	3.15480347506053	1.79930116035634	0.959019601003047	1.87618809717177	0.0606294559311034	0.426974073421046	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850726719819399	2.30945684676081
Merged-chr6-87400123-1	2.33060496034964	0	1.37098399968388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5714223-2	5.69686279280861	1.26171622354845	0.665405255042598	1.8961620966875	0.0579386134939084	0.413776681680102	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76984803426827	2.89839702698199
Merged-chr16-22615989-2	2.44949293425233	0	1.37940148575689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46924152-1	4.05832997242422	-1.33038637462539	1.0646351726859	-1.24961715408016	0.211439433713661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71801246036273	0.73596151290311
Merged-chr10-80163093-1	1.70843132016598	0	1.600036429173	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152885620-1	5.3842510026498	0.920050032721237	0.742336120085488	1.23939817533772	0.2151980768486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04761873595841	3.57210272055944
Merged-chr2-52869771-1	2.09691864181552	0	1.44646019762834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7227497-2	3.27046531324512	0	1.33371240081522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-81330747-3	3.34904142157127	0	1.32649791409427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-25798411-3	5.40824180571837	0	1.30139489083954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106793726-2	4.45612556973976	0	1.3222961854271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15264619-2	3.05953653888471	0	1.323372009351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129393758-4	9.88050133833067	-0.200247722852586	0.594285768042331	-0.336955272397373	0.73615061778896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9699000884017	2.65841191292647
Merged-chr2-170308114-2	3.54399192720392	0	1.34826610474734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79107884-4	5.24165723185909	0	1.34685734708381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106329345-2	2.41333243138715	0	1.42174707256379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108244437-3	3.67380759916422	0	1.33498477014253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63737597-2	2.89294765851012	0	1.32341182529305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72858376-3	3.6305275245189	0	1.33792128760888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142393940-1	3.56883856097699	-0.862943976289862	1.33009262622606	-0.648784873530451	0.516477435997851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0
Merged-chr2-126713156-3	3.91847499511538	0	1.30767385186066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84325181-3	4.08965296062486	0	1.31176124202475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-70038485-4	8.87499924332112	2.07666667042623	0.799262022353559	2.59823013273062	0.00937056692149105	0.10544621466747	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974378703053907	1.65423785335698
Merged-chr19-21033128-2	6.3092358981632	1.56483875904051	0.817641888738443	1.91384367727897	0.0556401327757504	0.401043471913102	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12439460683037	2.99522001049864
Merged-chr6-114250488-2	3.31904659359403	0	1.32900394954935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117470519-2	2.36158685268695	0	1.36252182525105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58292922-1	2.82130443321207	-1.44682804938762	0.816555313544102	-1.77186777844594	0.0764165082247359	0.507987095264862	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40869071551006	1.87822650685341
Merged-chr2-144280178-1	3.17093566177315	0	1.34290623398142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73186295-3	5.38464341359969	0	1.30511067120864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173411168-1	3.95867246241686	0.50313624700253	0.764393377180317	0.658216387036858	0.510399096378312	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71589524459276	1.62306943957144
Merged-chr13-107784141-1	1.79679417303649	0	1.42275489656162	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126628137-1	1.5683820170103	0	1.41422900801872	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103234398-2	2.6022336612591	0	1.40691166890561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-118772976-2	2.49613688493919	0	1.36539309873699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31066712-2	6.947269613106	0.511635524536914	0.981206169215418	0.521435291164163	0.60206357221186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42643137882782	3.67156849457626
Merged-chr5-96806103-1	7.4342989671841	-0.967019028363156	0.614766096506132	-1.57298691951128	0.11572184704201	0.691094847085283	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.91035888596071	2.9490277927014
Merged-chr17-47282312-1	3.31087872198363	-0.218736264697699	1.02820203489357	-0.21273665804439	0.831532372189331	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78286732234394	1.2972429702454
Merged-chr13-20038573-2	5.04272871224776	-0.739565449141771	0.905030474153993	-0.817171874607984	0.413830213030421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32868804999189	1.428339764855
Merged-chr9-118922112-2	2.41786998701499	0	1.35827227618368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52141648-3	3.91211741744068	0	1.31973711540557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76806017-3	3.47834427740718	0	1.31531976487052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63467776-1	2.61032274422544	0	1.3641541350989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40934380-1	2.73218292479609	0	1.34919245952374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104403735-1	2.46679023665663	0	1.3943981236236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88260501-2	4.05209855766704	0	1.37214217704949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33118537-1	1.68020187074436	0	1.37737528059712	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89086536-2	3.0962876269885	0	1.35292943431926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134245079-4	18.3429658430424	-0.501632191470867	0.380775236372376	-1.31739709821964	0.187705553100207	0.973940533022561	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.97403260887229	4.49630143769503
Merged-chr4-108870201-6	12.9094916599429	0.145806326419901	0.385292434613094	0.378430286507747	0.705110972765183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.99162945790454	4.08553393766015
Merged-chr10-85968276-2	3.83975977320332	0	1.30916185546138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16149269-3	4.67676641491666	0	1.30435796752541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31847896-4	11.2313823071199	1.63827899159949	0.489305731008245	3.34817045413246	0.000813469621146057	0.0161965222009172	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60103321301711	4.1925728244613
Merged-chr8-15043038-2	3.48681519870136	1.89732538237958	1.29977752159256	1.45973087767734	0.144364052180106	0.80576710012875	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr8-56530539-2	7.88878302223959	-1.10957440047333	0.583856817323761	-1.90042210273284	0.0573777486107943	0.410756566450544	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69508582361103	1.60340856582165
Merged-chr16-43930284-2	4.1323519602989	0	1.33550362452235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45274763-2	4.43415434102371	0	1.39821299466825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123357884-1	2.79598203534524	0	1.37023101445414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-19967205-3	3.50793879547375	0	1.33515694502136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140153755-1	3.64405440110392	0.754535346054396	0.993002705982277	0.759852255697542	0.447342903223458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08655280051393	1.88903407179563
Merged-chr13-98820737-3	4.46597205903853	0	1.35064009737584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133938660-1	5.11090469385513	4.41685767080414	1.08444449278268	4.07292185095661	4.64270057389963e-05	0.00171499102149262	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	4.11497644931582
Merged-chr1-182494747-1	2.18226899363698	0	1.37247339982779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134060706-2	7.00209230058021	-1.49082296414027	0.636876788352041	-2.34083419494353	0.0192407097936603	0.181927857354439	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42605363340278	1.41926493179619
Merged-chr16-21198723-1	3.37911522274034	0	1.39447114205809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127111683-4	4.49838790109352	0	1.32993076723824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79388996-2	5.05833997825918	-2.8029133460641	0.907990788499415	-3.08694028790349	0.00202228215103875	0.0326838786587153	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33113807716626	0.869764003783424
Merged-chr1-63668999-3	3.90754586941377	0	1.314501981258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58205187-3	4.17959980727973	0	1.31876697393011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97999988-3	3.47848889087423	0	1.32619517895524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64375528-3	3.70124344886943	0	1.31690878172874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23812331-2	3.47063233006199	0	1.39919606695358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135801684-2	3.73723536938474	0	1.31186292944321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42783125-2	7.17754808372912	-1.23116585283419	0.610211415706776	-2.01760540878803	0.0436323731229452	0.336583762730726	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61747042043947	2.16430127775811
Merged-chr11-110611039-2	7.11165100507568	1.08054456755601	0.661448341526958	1.63360386551362	0.102342055646676	0.632461128077143	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0482444321711	1.88513399620689
Merged-chr13-64448168-3	8.3801772085334	0.232188392876293	0.578321780482069	0.401486509262628	0.688061968676524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46551232573817	3.60081222212817
Merged-chr5-118473717-1	2.0046359331292	0	1.3983716293592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51941889-1	2.01411569844278	0	1.34529907658968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110462968-2	3.97911556197497	0	1.38916102554621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51494721-1	1.63282696661072	0	1.48478459576228	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132039970-1	2.34476587922559	0	1.36876175637583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45414986-1	1.64722819261896	0	1.60609996573669	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109585844-1	2.21525830177692	0	1.37995866832496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7547624-1	2.60697104121346	0	1.48382378743609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61336377-1	2.99036958115002	0	1.33694943513243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88482576-1	2.14486012447704	0	1.36672841814748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104940078-1	1.2832127576327	0	1.54191859881715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83652549-1	2.53701470891989	0	1.39317068023893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117025880-1	2.08143459839438	0	1.41157438238952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148695665-1	3.81268475277762	-3.0998270884281	1.10145415070045	-2.81430424176695	0.00488829400170634	0.0640012942968348	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65390508929701	0.306240821987646
Merged-chr4-145354062-1	3.01115182693791	0	1.41422002169745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30738822-2	2.37013919123677	0	1.3638991967077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45239965-1	3.1361080294619	0	1.32788437270824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-10418343-1	1.22794754276814	0	1.5773063818183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31297843-1	4.91646030201494	0.366765415498016	0.872713668403383	0.420258589703319	0.674296557624278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41650321691023	2.07921614574025
Merged-chr4-154825936-2	6.52354833269513	-0.768225468290458	0.608087411302026	-1.26334710111092	0.206464465972036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14322874682077	2.12216108640681
Merged-chr16-5474170-1	2.63033027804268	0	1.41764191281851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-44127672-2	7.36682514895103	0.522522043301098	0.683428958528477	0.764559412914204	0.444533945335928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33997186845725	2.45521893024669
Merged-chr4-134120358-2	4.96518229800123	-0.484765145887487	0.852995393461581	-0.568309219021968	0.569825020196296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41645395680914	1.44027592657175
Merged-chr8-58555894-1	2.50831831323942	1.1105290665485	1.45804978245484	0.761653737692524	0.446266693141541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	1.29684500016202
Merged-chrX-72023733-1	2.45736227320868	0	1.37969856273368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-91961793-1	3.79304113074986	1.1810531051118	1.15890569340005	1.01911062465038	0.308150450693183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892005523365874	1.8763281121661
Merged-chr17-88345111-1	4.71895491007109	-0.88572699713833	0.704463897319032	-1.25730644325299	0.208642691742218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06442111437269	2.24621868818842
Merged-chr15-103317305-1	1.40057134150942	0	1.59752547809659	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11492606-1	2.04593191265063	0	1.38490121960761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68820083-2	1.64167170259839	0	1.57521388206354	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63400912-1	2.42033688432806	0	1.37991817465381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3796093-1	5.44097044039285	0.0651198607410454	0.864277826502614	0.0753459810539851	0.939939437838007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38894578872264	1.31734301959449
Merged-chr3-75910435-3	3.98454098601757	0	1.37008417385179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145068555-1	1.37452830498529	0	1.71757515912458	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87028929-1	2.25247384077554	0	1.43262915141112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148050583-1	2.83429229790945	0	1.34625881622851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118621772-2	4.19027219452163	-1.7976399496172	0.835385668901732	-2.15186831248916	0.0314077276116178	0.265521846185207	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24775670611505	0.900948542443349
Merged-chr11-54485192-2	2.93768954582707	0	1.37616554687984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115276142-1	3.69551509588677	0.0634070967565863	0.909696906935164	0.0697013436818307	0.944431372281566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28249381214969	2.786034639139
Merged-chr3-126632206-1	1.441565449358	5.15672246391823	2.42707166186664	2.12466839975884	0.0336142920248455	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.19067769298368
Merged-chr12-52474615-2	3.58565551427093	0	1.33661785138117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-118529092-1	3.51072530719662	3.8677497681589	1.13535114007321	3.40665511456614	0.000657641696494462	0.0136166838717133	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	3.78660616627993
Merged-chr13-101680349-2	3.7749174545122	0	1.35220462815365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40744363-1	2.40525939510701	0	1.38478676214442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47917740-1	1.79418323737936	0	1.44402180698822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46740793-1	3.31304216648114	2.98769619429218	1.05713911594083	2.82620910459188	0.00471025046726208	0.0621935799219455	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	2.01628926503709
Merged-chr7-80696581-1	3.26329967786449	0.0186697336203624	1.07764185664556	0.0173246181050138	0.986177646141388	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19796599212061	0.733321818366247
Merged-chr8-40965315-1	1.70202261067105	-0.548048999460272	1.41349066457295	-0.387727356958421	0.698217808545147	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15091088377474	0.958904680953568
Merged-chr8-31271213-1	2.71125461112232	1.2983416235741	1.37369184344225	0.945147654309914	0.344583499177476	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862965511447223	1.95160684218358
Merged-chr6-119430735-2	2.98978503335619	0	1.35407936725676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59584868-3	4.02663321018595	0	1.31272677917003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124481727-3	3.704176117184	0	1.30576178356233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34469884-3	3.99390869312018	0	1.32334608061612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72310291-3	3.47067685841482	0	1.35323575306389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93181989-2	6.38783708433089	-0.168180933401981	0.596762895527613	-0.281822034617766	0.778079974293156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66526792158517	3.53319909339695
Merged-chr13-8744725-3	4.00786146150941	0	1.31075664877096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110287043-4	4.77459110839724	0	1.30019236557554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55858672-3	3.93974718823947	0	1.32504403312679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80326175-2	2.68081387473214	0	1.36756733230872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84708590-2	3.99494195268246	0.29495879219523	0.812592818985843	0.362984738855253	0.71661628459765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32197107161314	1.66127991928328
Merged-chr15-66034093-1	3.19683420306289	0	1.34595353009571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65404550-3	9.26114485421975	-2.27878854586158	0.741234756558941	-3.07431421111508	0.00210987089162128	0.0337507033742679	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65959127884488	1.41293295987929
Merged-chr3-84942391-2	3.08907852133869	0	1.36806929017179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75625495-1	1.70799403998718	0	1.45307324619847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56200836-3	3.19315479566975	0	1.32510759532156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130832756-4	8.47624745202815	-3.48885444064985	1.05088774926398	-3.31991161101018	0.000900459529320929	0.0175488900694916	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03872980205977	0.420961122473315
Merged-chr2-93497407-4	8.37827876327612	-0.332238196250239	0.594537071889019	-0.558818300757294	0.576285731364365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19157454102348	2.83342967427503
Merged-chr7-35144584-3	8.95907403854966	0.948342636560125	0.516262662827707	1.83693825806771	0.0662190105945621	0.456078805600488	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80159995640594	4.04349672251429
Merged-chr15-25144410-2	2.74461213711579	0	1.33697640536063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40991138-4	6.33291454724945	1.11249780650027	0.705064850095952	1.57786593155065	0.114596413137094	0.686192358916572	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62327331808541	2.62311798988456
Merged-chr10-12699140-2	5.13012716714139	-1.80792173682776	1.06464419845404	-1.6981464224884	0.089480129723463	0.569837895349966	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91204229765623	0.727201944460961
Merged-chr11-117166601-2	3.38925963679633	0	1.37665665428236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-68048956-2	3.01053672651858	0	1.36468569566219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-109853618-2	3.20785563193312	0	1.31381657342877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85293686-1	1.25798648758792	0	1.50914504930562	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127570498-2	6.46991535612152	-0.159823307960195	0.884084660943908	-0.180778284049807	0.856541609071137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53706414285886	1.45391938817053
Merged-chr16-15984995-2	4.29089214038208	0	1.3210462563014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62749681-1	2.20701355437368	0	1.34664870523699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24407478-1	1.598779872673	0	1.53601301508575	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100894772-1	4.37819276570287	-0.255329435005298	0.88993763408383	-0.28690711037089	0.774183445987026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87209287083483	1.41695929335733
Merged-chr11-80932546-1	2.33263393612915	0	1.34885893750332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19589473-2	3.50170804259139	0	1.31965361675298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60290544-4	4.257965338528	1.94921395650961	1.27996493065291	1.52286512687134	0.127792452084801	0.741429954180363	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr15-88537364-3	3.04937525880131	0	1.33313296999195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115643532-2	4.63815928851719	0	1.30418624580325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102946254-2	3.42849595813963	0	1.32348475939493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124615085-1	2.26966480246935	0	1.34828663378167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110380226-2	6.47678288229836	0	1.30391759844664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6314210-1	1.84030712376066	0	1.38530069712322	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54317360-2	6.38692532326116	1.95690369692618	0.858118821695843	2.28045772619098	0.0225805552784978	0.206197451820671	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05508994349271	2.34258099779799
Merged-chr8-122682644-2	3.24961190886795	0	1.33369745681273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34455897-3	3.8625012425052	0	1.30589038047792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-134339292-1	1.39954390761023	0	1.52410854326593	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75782112-1	1.13326631769167	0	1.70764534596124	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-37046867-1	1.82830538766493	1.93619747659108	1.38018828146348	1.40285025064699	0.160661498670681	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr15-5456799-1	1.60509428392565	0	1.45242885687025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40466820-1	2.66917064612788	2.17128212884437	1.01236159422801	2.14476936029968	0.0319712921174474	0.269191606069671	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19877363246116	2.7666106890699
Merged-chr2-147177799-1	6.01921695811251	-0.220224476211256	0.660237359036115	-0.333553491327367	0.738716518593136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92039844016	2.35422199170889
Merged-chr4-150869943-1	1.92874189553849	0	1.36806685275021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123159671-1	3.11361316927368	-1.83799834163696	1.39241878987938	-1.32000397796713	0.186833689850301	0.97041843231522	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752776503073505	0
Merged-chr4-119005170-3	4.26641587278191	0	1.3163737792942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155442563-1	3.36440522787786	0	1.41081921377704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77834625-1	1.64580457764896	0	1.40482977406413	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84436112-1	3.88732603291685	0.883685086952434	0.840133705747169	1.05183863105044	0.292873591806817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27155932835187	2.5421157536329
Merged-chr10-128284222-1	2.50112772670904	0.447942782625585	1.30046711457668	0.344447604714248	0.730509693209468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.563523181795778
Merged-chr3-67062858-1	2.16580870567189	0	1.43437638976205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102066293-1	2.38050672556633	0	1.37867785659227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62854865-1	2.2759599086946	0	1.35204893804668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105186774-1	1.68852733371157	0	1.59941524601773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90260317-1	1.94002934721771	0	1.37171280646241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97879454-2	3.31761616728258	0	1.33089271067669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35617806-1	3.579274658821	-0.419844996852052	1.19525463203861	-0.351259878521424	0.72539339182712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57750434091482	0.958904680953568
Merged-chr7-142538108-1	1.6740548156819	0	1.40777529865285	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121391792-1	4.91108725180653	1.31297893434072	0.912593201549774	1.43873407352916	0.150225881447641	0.829810688848481	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57479552415282	3.37797818469986
Merged-chr2-79194017-2	4.13742929718247	0	1.35639687366761	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167909987-1	1.8397368175602	0	1.45899229806477	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21856555-1	1.19510823382468	0	1.51050114517381	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5291737-2	3.14198781242817	2.67655457686347	1.26809204361166	2.11069424364524	0.0347986010944457	0.2858378664547	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr4-102393922-1	1.24838645606865	-2.87383965449649	1.51153702290912	-1.90126977436879	0.0572666859644502	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46985173345421	0
Merged-chr19-12465665-2	9.58887600350317	0.0392289186346401	0.673545560274022	0.0582424129092031	0.953555537424867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85347129600492	3.15018890295148
Merged-chr10-52421735-1	2.04566466299273	0	1.4222406725422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102161424-1	1.89654271255279	0	1.44957838862922	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33246098-1	1.4121564736446	0	1.46580235859198	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121472619-1	1.38216987231952	0	1.52523860256601	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5044584-1	1.50263081140376	0	1.4042106106083	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99239623-1	1.75096069393741	0	1.41125383281555	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69378137-1	3.97478946094997	0.0514177462105969	1.00996340142607	0.0509105044182739	0.959396835050682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.288948126371	1.04220233489076
Merged-chr11-19972133-1	2.44468550518414	0	1.34831775409659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27186323-1	1.47984289310012	0	1.46774130466058	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95623046-1	1.69341509528932	0	1.45187358017347	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117190302-1	2.16300852578973	0	1.43902481794142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37659665-1	5.58275080392792	0.506279681784752	0.704170462494091	0.718973187247257	0.472157440403853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90986393661603	2.71651275211031
Merged-chr11-40688696-2	2.63710076729449	0	1.45216721476351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-63504102-1	2.72160047077077	0	1.44069699593088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38944650-1	1.94196340929127	0	1.37309253743188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83635365-1	1.92313403589862	0	1.52125294904926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129432677-1	1.38142738747982	0	1.48277205595653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26657475-1	1.77095576762617	0	1.44865208461312	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130827527-1	2.15144870370715	0	1.61257573702049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87675868-1	1.47098076987171	0	1.47692979755456	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77741588-1	2.78755542373488	0	1.37512295430331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108868087-4	11.9000424526984	1.60582875359926	0.580972966762974	2.76403351871346	0.00570916742970697	0.0719712550461995	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26617708089239	3.49559273336076
Merged-chr18-53845607-3	3.03040049820908	0	1.37771620135532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106528202-2	3.06983623105288	0	1.44819655084252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46392284-2	3.53911726555667	0	1.33357912849678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114523477-2	3.3697940152503	0	1.33254883168048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96902934-3	3.50272257264559	0	1.34148680358609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53064308-3	4.40417731225511	0	1.33975548634919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84515763-2	3.94299711593616	0	1.34558195183054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24305460-3	3.99921752420474	0	1.32112483203376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121059702-2	5.13818474583196	0	1.31903579849186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25516944-1	2.24814138731787	0	1.35453376967701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8459375-1	3.12913222364378	0	1.33073407226188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100048607-1	3.51783097994064	-0.689044263501682	0.790547676109268	-0.871603679733597	0.383424622558638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36577307455798	2.39401765632919
Merged-chr19-44487460-2	3.06884286243245	1.95664138136208	1.40021617652672	1.39738521391432	0.162297763094466	0.876426742205934	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr1-173398772-4	10.1149665122682	0.740031286406075	0.504020584433481	1.46825607775101	0.14203467681017	0.797370961412146	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01723609794652	3.63248838935967
Merged-chr2-120037981-2	2.38534970288598	0	1.39297339493621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31079412-2	8.04570294388211	-2.41327231364512	0.87643971087022	-2.75349494519021	0.00589626807246186	0.0738259309183929	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97091999621098	0.851599296279844
Merged-chr12-105807692-2	6.65575162695703	0.533276298056659	0.635962916016609	0.83853363871728	0.401731063405729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01171566177819	3.74427526168983
Merged-chr7-43922611-1	4.87870769945049	-1.19896840413704	0.746852919707864	-1.60536080464949	0.108414424924148	0.659263820127806	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69196188451249	2.1506673546956
Merged-chr3-90628256-2	10.151977784145	1.24567400062063	0.685118020810234	1.81818892918256	0.0690352615041012	0.470404400234306	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87200155094747	2.4525440695086
Merged-chr2-38072223-2	2.61555439184753	0	1.35876909583924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-66838607-1	2.04940067061642	0	1.48900045677449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17623146-1	2.04219804086358	0	1.39953182441032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144665846-1	6.13470966234698	-0.20315882938049	0.707197195422288	-0.287273239621911	0.773903111167204	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67224388697051	3.22449065982335
Merged-chr7-97387968-2	5.82999624387486	-0.310203067042299	0.747206839003789	-0.415150197843313	0.678031953932764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41526469748598	1.88903407179563
Merged-chr19-4301919-3	3.23598129420716	0	1.36368913971449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10277998-2	2.54105506464246	0	1.37771797617751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47598015-2	7.50304234173351	-0.401279249425513	0.609918656039172	-0.657922569595479	0.510587887183833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27426925202048	2.72315056385711
Merged-chr1-170987155-2	2.73207045989107	0	1.49872896415813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90062065-2	7.04042034750725	-0.692019804487504	0.652060831855308	-1.0612810502948	0.288562194924572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50822897726979	2.7767501314117
Merged-chr6-127420008-3	6.10487383870342	-1.32534663828926	0.561079141681369	-2.3621384931859	0.0181698529278008	0.173967356691586	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73271290705394	2.15258675016244
Merged-chr2-126599169-2	8.52165648610867	-0.609477223252308	0.564631621387353	-1.079424531263	0.280398520068994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66255335863523	2.60524550487833
Merged-chr6-113226924-2	3.54886767623823	0	1.3158507414614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73117128-2	3.02159002965223	0	1.34530531967895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151307259-2	3.01688592399725	0	1.37689733745396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120678623-3	3.38804882516809	0	1.34090044886455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110182027-1	3.99146600139659	-0.234436541072604	0.682350691431814	-0.343571925721469	0.731168240831209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41921154048035	3.13595722895852
Merged-chr2-59688897-1	3.71402046485622	0	1.33555779689665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84782742-1	2.65220362288199	0.436836206626905	0.795449041232018	0.549169316931124	0.582889258992522	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99881551027747	2.56035012356975
Merged-chr7-39523578-3	6.90562843515992	0.11877740263037	0.800660973359065	0.148349184714293	0.882067200954608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80585038105967	2.12318498838608
Merged-chr9-106411350-3	9.91886506409982	0.383411949965962	0.630730215097785	0.60788581359864	0.543263209135064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41239749914576	3.14715751818681
Merged-chr13-44483610-2	3.19484627517111	0	1.32691710233522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55734124-3	3.47870881529823	0	1.32365163661184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120869041-2	4.24199707066749	0	1.31879498600837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-145185349-2	3.31888579027287	0	1.36274253732355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46371937-4	4.32210147171457	0	1.33430655847353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138856624-4	10.6096338256524	-0.358871442913646	0.59931321999708	-0.59880448309716	0.549303272427878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77050251051845	2.00143883346923
Merged-chr6-5163849-1	2.50486573254272	0	1.39042227989964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117676535-1	2.03423324775079	0	1.40149575191824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105556963-3	3.73646841331749	2.36332004965957	1.1997927967705	1.9697734942408	0.0488643356292395	0.364757696599073	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.825079211029734
Merged-chr17-26518557-1	1.83234638218108	0	1.35405522573825	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41910904-1	1.81902448069618	0	1.48706804839259	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111061819-3	3.13758345668137	0	1.34203048468551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132983841-1	3.85836826898009	-2.13998088970338	1.10029325328573	-1.94491866901201	0.0517847677309329	0.380344771512368	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1593718730059	0.805218875278971
Merged-chr6-38954873-1	2.06927971352267	0	1.40463409782034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4487637-1	2.38821595695571	0	1.3468044510102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61526908-1	1.21721382274309	0	1.6104356827893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43286994-1	2.65045762266188	-1.64534283929364	1.25408656697677	-1.31198505958011	0.189525175614307	0.980113336949389	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36935319716101	0.306240821987646
Merged-chr18-53135584-1	4.17402856993106	2.62937476287931	1.06838882691745	2.46106538802512	0.0138525116940876	0.141261895936618	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	2.01927470790114
Merged-chr3-94566241-1	2.37171185288054	-0.42730368156661	1.36416880182863	-0.313233729574977	0.754103094378871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr9-47730507-1	4.1955000548694	-0.359146681687455	0.717886980276154	-0.500283041140125	0.616875793613377	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72769818300654	2.09296523225154
Merged-chr5-100643464-3	7.46816308038586	0.153269184387204	0.69234599620616	0.22137657360203	0.824799231494378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40897261588704	2.12695852494485
Merged-chr3-9036869-1	4.10519204832572	0.620764290940142	1.06249209375865	0.584253091939854	0.559050046441201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00027027317926	1.40264952818025
Merged-chr17-81545417-2	2.04941019443261	0	1.43741078607989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5755245-1	1.80065685815969	0	1.45574604721595	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123323613-1	2.17062030632674	0	1.42153042027668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115250430-1	3.27309009707968	2.51645899482599	1.04074045475773	2.41795058827784	0.0156081961328317	0.154394971918864	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.62306943957144
Merged-chr13-70847165-1	0.796774980082187	0	1.94296372734529	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32509209-1	7.11773259800261	0	1.31222342278433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120598932-1	3.50310689818472	0	1.32635435431712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78424785-1	2.16628189568738	0	1.35530746474393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62686918-2	7.4919290237798	-0.575505455529775	0.598365115414347	-0.961796469587397	0.336151851807351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.85078653132736	2.63486423736552
Merged-chr8-125850016-1	1.26013611044021	0	1.49660090473548	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70637834-1	2.34450977202986	-0.0951953892129016	1.52936105231836	-0.0622452030333809	0.950367565440708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672706393429129	0.735627456805112
Merged-chr1-180987948-3	3.01193646535696	0	1.32560073094416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157634572-1	2.08242902531256	0	1.41439287484602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9903171-3	3.80325550660737	-2.34286594608239	0.982081356698217	-2.38561289256031	0.0170506882251621	0.165399527371571	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58099083206451	0.581381506691384
Merged-chr14-66153916-1	1.24822476928531	-3.40027474533338	1.30239738787596	-2.61078129992167	0.0090335643574971	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03735993278147	0
Merged-chr13-107856816-1	1.87218804190655	0	1.41895960670136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96409818-2	5.99331865113387	0.0379372573804532	0.674773474679992	0.0562222120518961	0.955164786488116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12134363789491	2.57078032519388
Merged-chr6-32780874-1	2.69359957570321	0.771778597221089	1.38091118764525	0.558890828118451	0.576236229352077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	0.73596151290311
Merged-chr3-144232601-1	1.90856586378436	0	1.42670783235769	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62554971-1	1.20593710170459	0	1.5011749001388	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129502477-1	6.91925448647565	0.860147674779463	0.705718091247109	1.21882616507599	0.222910178329249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47259340964457	2.95715003738506
Merged-chr3-58978470-1	1.71120511474378	0	1.42826976719645	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119249388-1	3.73800569429943	-0.779220188517982	0.962704537520212	-0.809407412294057	0.418280840026339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12884659018273	0.845523456341755
Merged-chr4-155216834-2	6.43352713035303	-3.06598552460267	1.07721014419461	-2.84622786104097	0.0044240525588383	0.0591812909371322	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65459890542874	0.306240821987646
Merged-chr1-39615597-1	2.04769673776451	0	1.38640757194981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118477143-1	2.74424006383432	0	1.35868390060528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155532942-1	2.40140391202131	0	1.35338865864808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80353990-1	2.60690123147635	3.34636309737867	1.25353795158495	2.6695347301991	0.00759564174027378	0.0892867071703418	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.81960882153758
Merged-chr9-57935895-1	1.89367261275296	0	1.44413478001203	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13311264-1	2.83029831027999	0.469062181506671	1.10462031872977	0.424636568378585	0.671101630938716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12964398892587	0.845523456341755
Merged-chr2-27704159-1	1.44203034221225	0	1.42815015277855	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71142932-1	4.47374435750315	-1.67426257292443	0.715902284539612	-2.33867471732002	0.0193522746050096	0.182771171605572	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46793027170737	1.354969417986
Merged-chr15-81948769-2	4.30313931978761	1.16958715569112	1.1850678628925	0.986936860169683	0.323673592748824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	1.0023426291647
Merged-chr3-115704402-5	10.7968331007074	-0.369712024313434	0.488064584783193	-0.757506354364282	0.448746560397858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50768393711768	3.07370578505094
Merged-chr9-47711119-2	8.53008203322652	1.74969427538979	0.577438839782056	3.0300945396229	0.00244477199394736	0.0378928061471737	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90669564743718	3.56779666681302
Merged-chrX-96019753-4	4.61210314203675	0	1.30500724872346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85050580-3	3.68365428099274	0	1.34594155268231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67021130-2	3.58523162323592	0	1.33186652499856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21174213-3	4.29726389928723	0	1.30564075669889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37515263-2	8.04829905692299	-1.82277845458296	1.10801053581961	-1.64509126552179	0.0999509915670544	0.620737264297732	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59348530480906	0.423054662900563
Merged-chrX-103521440-2	3.35373471830719	0	1.32969588591825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136690722-1	9.26324408045686	-1.72579149352066	0.700810264727492	-2.46256594742049	0.0137946801611756	0.141041006056752	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.12743760838133	2.14280852917652
Merged-chr5-149242625-2	3.43297830901294	0	1.32565701535325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-141012150-1	3.03970618528385	0	1.38124333324143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67102314-2	4.6257998433815	0	1.31723395827546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47015328-1	7.54304974468213	-0.30047619890487	0.594328016501726	-0.505573001039902	0.613156439065669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21779245442302	2.4360226934973
Merged-chr7-102193949-1	3.10722516910223	0.853890146765636	1.18316849970646	0.721697836764148	0.47048027237185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.683637474991079
Merged-chr5-32726357-1	1.68371632923341	0	1.55988484329856	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125490102-1	5.61480440713321	-3.51650290435285	1.10455091995443	-3.1836494278579	0.00145431028485505	0.0253557523676995	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66665215794365	0
Merged-chr14-13917844-3	3.56054994950236	0	1.32209851900207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103865823-1	7.0710993625337	-1.24717252802594	0.851456694462155	-1.46475156768102	0.142988710051052	0.800731874796128	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50869022006431	1.5105912313833
Merged-chr19-36909841-1	2.74882112877923	0	1.34240423072072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34766517-2	5.36498882420385	-1.8644205476879	0.85276336125297	-2.18632815667466	0.0287916055847649	0.248109753203487	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8749330394905	1.41695929335733
Merged-chr10-44371985-2	3.41357961367462	0	1.33099212511393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5730046-1	6.00543547849164	0	1.35810166037153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129687266-1	4.84754145220443	-3.1627122697576	0.902831317092959	-3.5031043007472	0.00045986935548872	0.0103458946041823	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7881395363328	0.683637474991079
Merged-chr2-22758691-2	5.00321078967145	0	1.31888188875844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104758613-3	4.30620135334583	0	1.31373436012069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128672481-2	1.76048344522443	0	1.61036202051935	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9780367-2	2.7690575411758	0	1.41759635958073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73574157-2	3.47125291578879	0	1.31475178672039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85410855-2	3.03963019712664	0	1.35564848231183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62464687-2	4.60008624777616	-2.20836830415222	1.20220931449089	-1.83692496600512	0.0662209730899739	0.456078805600488	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11527139032343	0
Merged-chr6-38943205-2	2.79197028734392	0	1.35689458167337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30867244-2	3.60834364514878	0	1.31372565326987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77531234-2	3.38474806568529	0	1.3230520856319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5097250-2	2.36371663139781	0	1.37343172676776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49192748-2	3.89210089790628	0	1.31682792032293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36931847-2	3.41955947868991	1.77679587641699	1.20241220691877	1.4776928129914	0.139490018946839	0.787467608508645	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.03956264035389
Merged-chr16-49902953-2	3.12768569649603	0	1.49996175654207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135296872-1	5.25484477203698	-0.0361172333978945	0.85067830120265	-0.0424569820892735	0.966134404125695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50371497038316	2.41152608579808
Merged-chr5-151344980-2	3.22715838803776	0	1.44486535896883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25764887-1	1.91063477778482	0	1.51822380102557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94891649-1	2.28714891164867	0	1.35858205978544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103146297-1	1.67969786366366	1.27963154694449	1.37445055755279	0.931013152792396	0.351846760538822	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr5-24652249-3	4.77360673031551	0	1.31150653214538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67564867-3	5.5595800214894	-2.03312838937908	1.02046505734399	-1.99235473546815	0.0463321500478884	0.350703194373835	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27111269259144	0.727201944460961
Merged-chr18-53144945-3	6.41438022732833	0.23319054029137	0.946151171253835	0.24646224343024	0.80532442847892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17099483890549	1.03956264035389
Merged-chr12-25213586-4	16.0185334584194	0.608937420058486	0.338356823849738	1.79969008199731	0.0719095880279258	0.485685161681947	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14453580880112	4.77907326541154
Merged-chr11-119485094-2	7.36859455917442	-0.0551869304378056	0.708117045344039	-0.0779347578209941	0.937879950740396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10845859213642	2.48372707563089
Merged-chr9-120591652-2	2.71470931662828	0	1.3232491324981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3122988-1	3.53896507136584	0	1.33504420789845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33625700-1	3.30210456470517	0	1.31885220190658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78249765-1	2.69108779410844	0	1.37351487294439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16294524-3	8.20483461250146	0.956542910445868	0.547982204583669	1.74557294460429	0.0808851869479181	0.529346362173125	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15704651592209	2.7635850447605
Merged-chr9-23597491-2	2.61125603320423	0	1.33180622029505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55476997-2	2.5993932600838	0	1.37249387883943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130411959-2	3.37011818221875	0	1.34263905038342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-144265854-4	3.90526604299875	0	1.35544165611341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43335767-2	3.91192998081062	0	1.33080090704195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84026368-2	2.80214633998259	0	1.34329379412843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15999480-2	4.99315339909742	4.28100699865632	1.07128008370992	3.99616035409793	6.43781351995727e-05	0.00223887899028807	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.55091902091157
Merged-chr6-147116755-4	9.14932376690349	0.0922455775801154	0.466354780854205	0.197801290706515	0.843200536287355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93773568806816	3.30457403055127
Merged-chr12-84589899-3	4.37028395477105	0	1.31154468297481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90535332-3	12.9391432412925	1.38661567641002	0.49717449567247	2.78899197058471	0.00528723758521512	0.0680187120331819	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.440106171645	4.03195119006635
Merged-chr2-128419182-3	7.30570758467994	-1.55039773966831	0.826810506200644	-1.87515486080685	0.0607714220270026	0.427697290659829	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24905782787969	1.51144536133504
Merged-chr8-128060026-3	9.58582928729366	3.21837747796395	0.903964541221765	3.56029172738801	0.000370443024070467	0.00873582455824927	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	2.97400306278741
Merged-chr19-57031520-1	2.49673613662716	5.08742516505027	1.4222693384229	3.57697731900169	0.000347590320189043	0.00835912170062209	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	3.21050514855816
Merged-chr15-67092469-2	3.43315416624185	0	1.37269543559987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122020262-1	4.81340674158539	-1.54526130593126	1.18529068068769	-1.30369818231822	0.192336509430126	0.9904193495052	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.944499486387119	0
Merged-chr8-14072678-1	3.08615157070196	0.230588061346879	1.03822117160448	0.222099170825544	0.824236683327154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.926429655374748	0.793480537552656
Merged-chr3-9696771-3	4.29251491635478	0	1.32561659292622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25964077-1	2.03460115849791	0	1.40885770127057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127630099-1	2.23568854322561	0	1.39138052100025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43481001-1	1.3532806768631	0	1.59543351002981	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40155043-1	2.08074963583458	0	1.44413538258612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12381603-1	2.24761560652457	-4.05170407850008	1.22395058080912	-3.31034940628209	0.000931795766405927	0.0180533835242977	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43694451260099	0
Merged-chr7-80755673-1	1.12258242763482	1.23192728835139	1.58306069572739	0.778193338812788	0.436455043176195	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr4-72231038-1	1.91885347204288	0	1.43677735846051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120085846-1	4.31164710076135	-0.696354156069446	0.880797559309364	-0.790595010975575	0.429180359098075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62014199571916	1.52696130946871
Merged-chr6-129067169-1	1.83445861832202	0	1.41862429477634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136698645-1	2.95719112943063	3.26573404940693	1.21435984024702	2.68926387481871	0.00716097883874156	0.0854063375061884	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760552225909557	3.22587140279999
Merged-chr12-85666738-1	1.99028118373981	0	1.39910688802487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27704417-1	1.97335371822402	0	1.41565861516652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121635761-1	1.87325714494979	0	1.4752844152698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75399332-1	1.58859593211212	0	1.44798079620301	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126683690-1	3.61614686728289	3.73527855862003	1.04167463518348	3.58583998540207	0.000335994944955268	0.0081772535095147	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.47188117561962
Merged-chr1-37457782-1	1.25752255755568	0	1.52733809786891	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44275506-1	2.0232897670571	0	1.41898430368829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-69522286-1	2.03510872813583	0	1.45888832529975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35810905-1	4.56619497742206	-1.25665320906527	0.79583733175795	-1.57903274817407	0.114328545743612	0.68512132194061	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34998539360964	1.94287088021325
Merged-chr18-57597761-1	2.05277414847729	0	1.39314272172388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34827939-1	2.28904896956195	-2.77259535359315	1.3403009371273	-2.06863643588561	0.0385802161248163	0.30793487271189	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54140344106489	0
Merged-chr3-107113400-1	1.55144459353725	0	1.42014420324429	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74247225-1	1.63269113715217	0	1.36916714721025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79843291-1	2.86971488599393	0	1.32489019733649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83528445-1	1.28324182378254	0	1.60061557614056	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16210661-1	2.06396678069141	0	1.39643133765528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135705712-1	1.24983629150771	0	1.68211685850414	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111551971-1	1.75238140960126	0	1.45151922644399	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156003803-1	4.68919586955196	-0.429784214407376	0.840238977520325	-0.511502353384909	0.608999340930982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79564606427624	1.61691174577224
Merged-chr12-72361052-1	2.92897909132867	0	1.36810862320796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67012716-1	1.89334421267122	0	1.37178659026252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93919687-1	2.13718459260751	0.630889903299467	1.23471668578211	0.510959243172326	0.609379596068836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.719438056733391	0.986577844696341
Merged-chr16-70414881-2	5.5095692332406	-1.59762032416349	0.919874182320566	-1.73678134995938	0.0824257721912158	0.536687376405658	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44466173417021	0.73596151290311
Merged-chr8-23014504-1	2.3458901185674	1.8698298218611	1.43555395192021	1.30251448882154	0.192740568281104	0.991970267735788	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.659012160579651	1.52944205045577
Merged-chr4-129832598-1	1.58871234951298	0	1.43672749487078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29820374-1	2.7709824696086	0	1.356680513638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-33225297-1	2.03256631469381	-0.436583576789814	1.29213960470504	-0.337876476504621	0.735456275183586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41147055400548	1.26514550294121
Merged-chr5-44063924-1	2.66622789536732	3.81773389672467	1.54712448609418	2.46763200443087	0.0136010062877426	0.139590286929296	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.62128842389662
Merged-chr8-128436317-1	2.45654901818005	-1.53077799337137	1.26278719132708	-1.21222166639388	0.225427539895875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.531725110705892	0
Merged-chr1-173487047-1	4.17917826724311	-0.84006364065861	1.31368833001503	-0.639469516067786	0.522517538537461	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1200679017798	0.683637474991079
Merged-chr11-118423451-3	4.52087350907971	0	1.31905428990325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144679759-1	5.07744579300112	0	1.30580489676067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105676609-1	2.37073660310236	0	1.41312300166805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-3776506-2	3.81548844322332	0	1.3047681590928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150894746-2	3.16436323102745	0	1.39349680991962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128769579-3	10.2254292505449	0.677239253211344	0.495526478438467	1.36670648831017	0.171717323327219	0.913393586499021	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40876070962069	4.09876068799569
Merged-chr11-23974253-2	2.72739680150987	0	1.40470575360906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65726034-2	5.31433946965373	2.81133450483629	1.18312975016894	2.37618444167672	0.0174927164756597	0.168819827325131	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr10-93178000-2	4.68083303887627	-3.1244575897052	1.1028338717304	-2.83311718092479	0.00460964844913644	0.0611644253869814	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15435722204587	0
Merged-chr11-107676804-2	3.71236528388153	0	1.33604866312232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71812877-4	11.6739336870756	-0.288525231048587	0.501925950470482	-0.574836249805647	0.565402048087943	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87070552993911	3.32386601991198
Merged-chr5-73401716-1	5.47061547306552	-2.01483972593808	0.766940911081447	-2.62711207190265	0.00861129671464729	0.0987044018795547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66907456065667	1.71989966306259
Merged-chr5-66169287-3	6.92085074923462	-1.01084005928168	0.635181056792653	-1.59142034931885	0.111515007704382	0.673620190907605	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23172749561922	1.98733255708278
Merged-chr8-64417150-2	2.56252405831937	0	1.41705222288124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72535352-2	3.38521502858946	0	1.32178710481334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102760527-4	6.21398657980347	0	1.34312232839646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134526371-6	10.7110268383746	0.136658545847776	0.556273507773546	0.24566790245817	0.805939320955393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22214048138465	3.32661066584029
Merged-chr11-106289629-1	1.92990017390881	0	1.43440402800986	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25279345-1	3.32430908244073	0	1.32387836166026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80063684-1	2.23849477519992	0	1.43750102671773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40637616-2	3.07813931945028	0	1.3406167051539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99387065-1	2.31081446758809	0	1.36153484656245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64388897-2	3.30232588414861	0	1.32866415771055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65965440-1	3.19835756276485	0	1.32645007519888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-41837841-1	1.72491137160184	0	1.42015570713396	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80815656-4	3.76559664666315	0	1.34521764831601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36904923-1	1.95290477900477	1.28022902089282	1.37562668350499	0.930651488695244	0.352033871181618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr10-120365755-2	4.09745616233236	-1.65547594569777	1.11847699192033	-1.48011622738475	0.138842231661534	0.785022309849837	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68466056884961	0.563523181795778
Merged-chr7-81727970-1	4.56609676863991	-3.70645517504524	1.11187849602841	-3.33350738258232	0.000857583957099128	0.0168692598617097	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09692293206561	0.306240821987646
Merged-chr5-120130372-2	2.9331161700061	0	1.34207676723903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136688158-3	4.21023814485413	0	1.31379738553719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139609186-4	7.72668018220715	-3.47268092748869	1.02021021625503	-3.40388762252956	0.000664340790332126	0.0137249488729191	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92363820311947	0.423054662900563
Merged-chr6-53216849-2	2.53725668266738	0	1.36647940929778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111429171-2	4.37342800553584	-0.91419700565245	0.820513726226903	-1.11417637076755	0.265203530344632	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76894031956361	2.15292080626044
Merged-chr12-87330477-2	3.00206034306245	0	1.37275905321373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-3284249-1	2.63150939773189	-1.29703473222959	1.26644401983232	-1.02415480820173	0.305762160289877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	0
Merged-chr5-90500961-1	7.85301464256403	0.137528380404654	0.503420226119504	0.273188031130094	0.784708679949925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23180825189293	3.31048433186102
Merged-chr10-59252143-3	3.68446873516917	0	1.32536894794029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27754287-3	7.27209929734877	0.102158141179394	0.6052443141183	0.168788270779899	0.865963184514249	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33448413377904	3.60437795295367
Merged-chr15-19332480-1	6.07224849903255	3.49691239975244	1.34091677493572	2.60785193019909	0.00911123572528342	0.103206881274423	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913105633848431	4.12566187312478
Merged-chr13-112100827-1	2.56616026226775	0	1.44925607869899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-71867293-2	6.21961601331957	-1.47460862317766	0.60534483481362	-2.43598117696285	0.0148514573270267	0.148414639928412	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.95453827479673	2.26276386882201
Merged-chr3-9853270-2	8.79942089994276	-0.120694658293493	0.686710284969822	-0.175757755395781	0.860484259223859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49035548053162	1.62042974503458
Merged-chr11-95047177-4	4.78359713311569	0	1.31236046278881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20719378-3	3.93149626344679	0	1.34379215735896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11240677-2	9.18364555779418	-0.37920871256367	0.613410931755385	-0.618196861080542	0.536445578937179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26825539765165	2.56757889007095
Merged-chr10-91180137-3	7.55358060445512	0	1.29424501825602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64377922-3	4.16633623701057	0	1.31149436601202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-5459646-1	3.75153223908577	-2.81054858933729	1.03116680360307	-2.72560033887512	0.00641846643425337	0.0788978757736496	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89881288949352	0.469435083901436
Merged-chr2-72881713-1	1.51244587653976	0	1.60643885716434	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48894335-1	2.32910374564378	0	1.40061704659443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91680927-2	8.79463369623654	-0.746565740103402	0.6125305707321	-1.21882200787318	0.222911756529345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47666616944371	2.30670691456252
Merged-chr9-65831428-2	2.233090570233	0	1.40297651147752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32801563-1	2.16823948592708	0	1.38968824406047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141976292-1	2.55913057916123	0	1.33451793815144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83123125-1	1.98848838794981	0	1.40055441607849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59852868-1	1.60080827766975	3.06497878177744	1.49373589344473	2.05188801797435	0.0401805465902819	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.50954942419772
Merged-chr11-119477308-1	3.44417275593584	-2.25414174095279	0.914557539897468	-2.46473474069823	0.01371147167577	0.140449796037916	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08805801710466	0.666688015277142
Merged-chr5-142795159-1	2.05561470424067	0	1.44149025965294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75617094-1	2.98855497954244	-0.698169431312029	1.25309717083933	-0.557155061521999	0.577421490247878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37112030808195	1.96334085054552
Merged-chr4-11235702-4	9.95471697461668	2.20222027473399	0.632923685125585	3.47944045465296	0.000502462016657829	0.011008129347979	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68545684001813	3.83707195948824
Merged-chr5-114929039-1	4.96299137098128	-0.0235145589751789	0.94883100585726	-0.0247826629083792	0.980228319806881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50359199937282	1.97058611410777
Merged-chr9-66280633-1	1.9636113120977	-1.17602344457792	1.4596942683752	-0.805664220280155	0.420436485330968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0
Merged-chr13-102025673-1	2.9380263385799	0	1.33547129529416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21357521-1	3.07244048364332	0	1.34931096121543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41187478-1	2.29697534770426	0	1.44892339357098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149794603-1	3.64227260652726	3.0615278872504	1.13777222522948	2.69080912625803	0.00712789638641248	0.0851516484947915	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	2.84007006085556
Merged-chr14-51252330-1	1.82444992942415	0	1.53616111205338	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178146693-1	1.33469829595401	0	1.62956248222996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100028313-1	1.46457967072675	0	1.39000621665773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-141132587-1	0.956995858964266	0	1.96263509889076	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25044982-1	5.69066802216367	1.05021901510251	0.708276500681665	1.48278110891968	0.138132576754029	0.782320277393725	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28407691713259	3.57485958356969
Merged-chr3-49496260-1	4.18152909023318	-0.0502443056280182	1.51311969965601	-0.0332057705939858	0.973510496393139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90439373312524	3.12758358736382
Merged-chr6-31211292-1	2.11109241979497	0	1.40842420838685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38632253-2	2.8672960308471	0	1.32926750200239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107763342-1	1.32450588725313	0	1.47907261360113	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64263199-1	3.08962283475258	0	1.35428441308581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105483534-1	2.44255373269463	0	1.33742412312892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24448950-1	2.12394822238137	0.764809692340574	1.11736313551482	0.6844772912507	0.493673824265403	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02341579043436	1.31470332505763
Merged-chr12-24674509-1	5.25743155009911	0.957138650124056	1.03238745756665	0.927111854283898	0.353868461953631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41641521763457	4.07451950572158
Merged-chr11-11724628-1	1.53485493008818	0	1.56090693052087	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44481593-1	1.70597885328976	0	1.47793156920344	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24712655-1	1.19780642466993	0	1.67615161659029	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-32934757-1	2.55619512235736	0	1.37919958071701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111678289-2	3.08491069600897	0	1.32161369743308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29045172-1	4.82241341388558	0	1.3196066540467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48827575-1	2.47576343561322	0	1.38010667217534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24653870-1	2.29539947517811	0	1.38096771947924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129231709-1	2.81058924141493	0	1.32818133085801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75830383-1	2.18110051418243	0	1.37663160250485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41778868-1	1.96417168167672	0	1.40474489135419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93988688-1	1.10050783960835	0	1.63659183290378	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130900061-1	2.36391847360326	0	1.37745230354434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34876845-1	3.69105749940155	-0.717336252733667	0.909573231240051	-0.788651455535581	0.430315747911999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1209998016245	1.38450684154311
Merged-chr15-81528326-1	3.09437569369966	0.596731078617155	1.42492931605126	0.418779424281063	0.675377343564026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63880174969683	1.54311005189624
Merged-chr12-70139986-2	7.41824828901045	-1.3113226956351	0.705909289821624	-1.8576362636713	0.0632206851577222	0.440804405923657	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98754423127988	2.09872908654163
Merged-chr12-24534361-3	7.81514589135442	-2.36885384234315	0.923749580072174	-2.5643896283645	0.0103357445994481	0.113780250437254	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88215764801112	0.581381506691384
Merged-chr3-148220750-3	10.4068276237313	1.40316602357427	0.56451475773627	2.48561442255474	0.0129328004060902	0.134528299162109	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13444705905346	4.21296297314976
Merged-chr2-153118372-3	3.73622579160982	0	1.31333472195934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124013988-2	3.60101455103334	0	1.35654579267569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11970174-2	5.13118622757331	-1.83943631235731	0.806534168202915	-2.28066755864276	0.0225681262463821	0.206112757190228	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07997527130059	1.07982873328226
Merged-chr3-68717498-1	2.90824721383121	0	1.3510708683121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150404000-3	2.77602248591213	0	1.39934724438482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82321304-1	3.80630490914065	2.26475863706418	1.04723297128961	2.16261204445774	0.0305710310979348	0.260455619051584	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.88086620139027
Merged-chr1-133120152-2	5.97482718913763	-3.84159312871715	1.12201269628546	-3.42384105049358	0.000617427229971188	0.0129647814169978	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66390067685774	0
Merged-chr4-109987827-1	2.37168926350417	0	1.3442986543359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139297824-1	8.04955349387351	1.05758711277702	0.762464446546809	1.38706416747275	0.165422197171744	0.887785717508604	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74468828450766	3.708310591257
Merged-chr14-26565071-2	2.80291534510316	0	1.42988851330876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4447485-2	3.97126920394475	0	1.31197094261149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170116894-1	3.03741757722929	1.1768546795645	1.09123837531991	1.07845793016535	0.28082944653329	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.823918105197374	0.793480537552656
Merged-chr14-51904901-1	3.80502119238421	-1.0862713479589	0.82752567102861	-1.31267389760692	0.189292856831958	0.97945451124722	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44091581513818	1.60978507060531
Merged-chr12-103368016-1	3.83722277583692	0	1.31013812338321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24621788-2	5.38918440689449	2.0468053485885	0.73526917690719	2.78374969721715	0.00537344840698389	0.0688361810630796	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24014495816986	2.65197290288771
Merged-chr1-148993793-2	2.96742841364111	0	1.34208371123224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41973468-3	3.90557501927582	0	1.30961634114326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82984680-2	9.1613830277051	0.365689608988722	0.601295309378449	0.608169735045382	0.543074905194596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69969340644339	3.09282950292299
Merged-chr11-114679343-1	3.05092037243761	0	1.33473292599184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122406750-1	2.78649933009965	0	1.33809798748141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97746071-3	5.90239799123136	0	1.31357867309424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57549065-2	12.0599411458802	-0.0588551745410985	0.570986304395435	-0.103076333159015	0.917902388359059	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.77360930574356	3.69360857578346
Merged-chr4-132573929-3	5.38820201368045	0	1.30986112400442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89696481-1	2.8568915716777	-1.82494330342024	1.03174317248967	-1.76879610360447	0.0769279072405756	0.510659389124609	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52537784809776	1.19454903376793
Merged-chr12-5410577-6	15.1709891696219	0.204139263174296	0.404749470695341	0.504359555612499	0.614008733616007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17396779026055	4.49462198597256
Merged-chr19-10318003-2	2.6383718453892	0	1.37736674273284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46802599-1	3.59456182186628	-4.99851526843538	1.04442862609551	-4.78588497437287	1.70235537816056e-06	0.000123739838199421	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73859321317545	0
Merged-chr17-84270291-2	2.594203494966	0	1.34841433080767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83790156-4	6.55903499050663	0	1.29738999452711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20794802-2	3.1597708595812	0	1.3386898934767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75964239-2	3.48652455522744	0	1.34859177433204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20640128-2	2.81564363630885	0	1.40332144272833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49751363-2	3.24117382071565	0	1.32544483047071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50593750-1	3.20396345950717	0	1.32827449209141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88823264-3	8.90452339976747	0.134066394754726	0.665030502861273	0.201594354210686	0.840233859300811	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67344312217613	3.60498618384376
Merged-chr10-37280055-3	3.93946461409612	0	1.30772198726567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56168045-3	3.7377356460287	0	1.30829351332691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141015465-2	2.9804709150446	0	1.41213262431323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107511049-2	3.93490537329917	0	1.3046409081657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130467644-3	8.69226640991355	-0.153857747527347	0.728034873611912	-0.211332936242506	0.832627483849152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81942845921145	1.86688937275899
Merged-chr7-112514697-1	5.74603972188253	0.417159257642392	0.790351586858404	0.527814791010382	0.59762789011862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13959267301409	1.60340856582165
Merged-chr1-161500242-1	3.61397767605959	-0.805759088941555	1.02945405017023	-0.782705249261314	0.433800218991355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83743809464842	1.07982873328226
Merged-chrX-48277485-1	2.05809200594983	0	1.36076490932949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10771517-1	1.46770119341493	0	1.67399862108374	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79610346-1	1.95925447812002	0	1.40479226359863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107105132-1	1.70842367183497	0	1.4427299051467	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98831252-3	7.23417107702292	-2.75089501475323	0.954069356004374	-2.88332813274072	0.0039349730862653	0.0544549899259385	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24810854137156	0.581381506691384
Merged-chr11-22763255-1	1.96528803563618	0	1.6185502377585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60373086-1	1.5847867697916	0	1.44429623939342	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64039016-1	2.22090827182526	0	1.3586569920365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37797767-1	3.30567844167768	0.0688131333174073	1.08231737695966	0.0635794405433188	0.949305102684273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1043747452153	0.73596151290311
Merged-chr6-89257589-2	4.21079947048547	0	1.32821513564095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14620730-1	1.4038358085222	0	1.55916137485231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112416605-2	2.80674283151144	0	1.33637831204422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104931970-1	2.10984148965718	0	1.37112764980029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92733523-1	2.5726874100969	0	1.3919329312449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75029672-1	1.43045902058519	0	1.73798269145576	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149053045-1	2.65011445262665	1.89044732061423	1.18586483973992	1.59415074742315	0.110902274919891	0.670709861815383	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	1.01372795773128
Merged-chr1-54910967-1	3.72636185826891	0	1.3154189058328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-72911823-1	2.08613455877957	0	1.41741921360104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55465750-1	3.65050845004916	1.45562464134358	1.01897092719425	1.42852421251278	0.153141030614283	0.84221122593174	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7824474018443	2.90807235199705
Merged-chr5-99235745-1	1.66945364504587	0	1.57134049340334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100599898-1	4.20234871261907	-1.55269304787617	0.999556687166734	-1.55338168191072	0.120331976512916	0.711860704075049	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85269357790005	0.845523456341755
Merged-chr12-79638106-1	1.72508493784412	0	1.40860140756636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-88948113-1	3.60561503397319	0.296441452517351	0.757951271920739	0.391108852903081	0.695716777132871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48319724008371	3.04256828795291
Merged-chr15-57859488-1	1.72442446810027	0	1.44664612464918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4509408-1	3.09880031735565	0	1.43832608491857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51373156-1	1.54007883932842	0	1.37161696712276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120783225-1	2.93415966414953	2.33703280636847	1.29698601886015	1.80189514180142	0.0715619047321612	0.483836960851299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr3-79169972-1	2.05471373788396	0	1.49123612107724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68473772-1	1.50182532505216	0	1.44761744630048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4297605-1	2.23124245111795	0	1.37720510057065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-15976101-3	4.03924435243165	0	1.3175870933317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54157670-1	2.0164920640145	0	1.44272331264432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22848752-1	2.25052897359733	0	1.37532053438576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64120945-3	7.82027716883421	0.0438773895858744	0.615033675861464	0.0713414424412067	0.943126012938493	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82349766067282	2.56868975155888
Merged-chr7-106811008-1	1.96880661130774	0	1.49066573876434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45063639-1	2.66473482105109	0	1.35540923508728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47087462-1	3.98319617638751	1.77118557696992	0.779819144405898	2.27127737203642	0.0231301921549571	0.209923669839958	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17603029711683	2.63777742201255
Merged-chr2-150678573-2	3.10634694917102	0	1.33942656794982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34199792-1	2.44087597712315	0	1.35792819644245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-97758114-2	6.4720011714855	0	1.3138150420379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80777664-1	1.322730196829	0	1.44776516240357	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103346273-1	2.4210332449606	0	1.39060036961366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88723578-1	1.6299040999496	0	1.40206296515201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-76835924-1	1.84386720983492	0	1.38678523396597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45820234-1	1.93241940372059	0	1.47588000516425	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107241924-1	1.67329543898162	0	1.41511467977302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127550901-1	2.59506367332579	4.40593358905022	1.04532494732819	4.21489375175786	2.49895806799206e-05	0.00104946602770571	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	3.60222811815308
Merged-chr17-86438122-2	3.50721011845681	-0.539749893832514	0.859203221192053	-0.628198173051153	0.529874126973868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50488315767007	1.63412505265868
Merged-chr8-95014313-1	1.76203456378146	0	1.42693399563315	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9444912-2	3.22409651745858	0.254143035200252	1.10407738813053	0.230185889080273	0.817947326361875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81654482346225	2.22221276223304
Merged-chr4-21712403-1	5.14810073915673	0.569889518187905	0.843562632757144	0.675574635549287	0.499310750044668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55585476137236	2.25495835162666
Merged-chr10-120954516-1	2.22597631224445	0.754389863904639	1.36708333287087	0.551824344402198	0.581068706424298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.306240821987646
Merged-chr6-140712996-1	3.07410840176743	0	1.33981973767352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106463216-3	3.09084021857783	0	1.33473390780176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46449049-1	1.03575187747276	0	1.4996846236811	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98040786-1	4.80728113353745	-0.46397173896238	0.731097450805431	-0.634623658516706	0.525673894278579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02181323726622	2.26276386882201
Merged-chr6-145125577-1	3.93135687414883	1.21212501789273	1.06225272419714	1.14108911211205	0.253832841704017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15739180407335	1.84725436275124
Merged-chr19-25036950-5	11.0600645817993	0.322908368055295	0.617697235052246	0.522761556522076	0.601140195322708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81263349494639	2.93838820002239
Merged-chr17-72927144-5	8.46936634217523	-0.0555315191540011	0.621427614043645	-0.089361202976894	0.928794855614773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13762516993615	2.5421157536329
Merged-chr15-99596428-4	10.8485638248374	0.774259379109137	0.512482009846821	1.51080304134102	0.130838639617607	0.753749602790459	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68010413144224	3.50761025920532
Merged-chr1-107516071-2	2.48643236911755	0	1.36410768424993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70644259-3	8.6385762794898	1.09102263897188	0.597763985530454	1.82517292005089	0.0679749389323261	0.465322191978371	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17117523177253	3.52908746205369
Merged-chr2-173300934-2	3.9824497576833	0	1.31717790888329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115608520-2	5.66847592402363	-0.105806316237577	0.890601663979559	-0.118803187235012	0.905431283522178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80532975355165	1.79795952835561
Merged-chr2-70742769-2	2.27775962608341	0	1.41204917102286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27685863-2	3.45566282183157	0	1.3146372265962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25476114-1	3.57446269873569	1.07637298506872	0.928016803987333	1.15986367967041	0.246104312328538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24742471775159	1.58148496924487
Merged-chr17-22431863-3	3.39115980783888	0	1.34096201923431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126502149-1	6.10771075736201	0.614018170000972	0.791386192515362	0.775876779008945	0.437821744521562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50029502077048	2.92820688000235
Merged-chr13-48572353-3	3.92276169853366	0	1.32058135318273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38237829-2	3.62823408300698	0	1.33268968283685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122154755-2	5.74946115542628	-0.423554377409476	0.836143693305287	-0.50655692412767	0.612465739135267	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78027155485052	1.71664175267955
Merged-chr11-106122157-2	2.60366135058368	0	1.33308796409204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24627840-3	3.48021113612741	0	1.35606032159154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110418953-2	2.82433639471007	0	1.32692388661336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34570506-1	1.68851487733408	0	1.51067500166708	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111429159-2	3.61772559538897	0	1.34368338358388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31162270-1	2.20707953878024	0	1.35146034979966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77368933-1	2.16420429671131	0	1.41321717790382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148279216-1	3.49101317117776	2.89834289328448	1.20371574714591	2.40783000484678	0.016047651442427	0.157777834296765	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.41695929335733
Merged-chr5-146904606-3	2.99129368781273	0	1.33331027875661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8844130-1	1.71238860068162	0	1.47003325949513	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94990952-2	6.32710938934916	0.482104981456499	0.654813336917167	0.736247956900555	0.461579811826877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46652342511597	3.02193084825737
Merged-chrX-151949370-2	2.18481297538695	0	1.51202845675897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62458997-1	1.524943150748	0	1.38110031134123	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33303223-1	2.2085447790354	0	1.35338791734627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92893708-4	3.8900039146865	0	1.3279111771156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11456140-2	3.05960170375354	0	1.32127186924736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72945428-1	1.60547600253878	0	1.56038438873449	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119745953-2	2.32986335397167	0	1.45151777804023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44256742-1	3.03962344413792	1.05285493796088	1.1828730924972	0.890082752443175	0.373421453388771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.666688015277142
Merged-chr6-82749855-3	6.73384930094153	-0.93027178890048	0.665941682221493	-1.39692680866171	0.162435581900085	0.876870345711935	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82475562405063	2.49081581617818
Merged-chr2-75683484-3	10.7790230491792	-0.204325551523207	0.455603119137431	-0.448472679269723	0.653812099293317	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62603881175973	3.49806240130519
Merged-chr3-138482154-2	6.87599708882213	0.959210182866485	0.92534467086599	1.0365977273839	0.299923372883927	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0018156979048	0.905469781553611
Merged-chr3-57740061-2	4.72817602287187	0	1.35068522274299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23245374-3	5.91819121678911	0	1.31984347673682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84879300-2	5.94828778737305	-0.203793150652693	0.690586444264655	-0.295101579744581	0.767916282975017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49911224068334	2.311378010734
Merged-chr5-147899064-2	8.76571707742844	2.158473428042	0.635047946378366	3.39891411404701	0.00067653957597881	0.013915377756346	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61653305827193	3.27549233758429
Merged-chr10-118086489-1	5.34311767438037	-0.104505461991488	0.617714016627473	-0.169180978864711	0.865654290788376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26560930265062	3.14722338365679
Merged-chr2-170195720-1	2.17184684571417	0	1.33114748538277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117133931-1	2.58188414298287	0	1.40183134694927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3856910-1	2.15630543049504	0	1.39046173575344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87020925-3	3.14437961710112	0	1.40665231354909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33092535-3	4.97471168789144	0	1.31646802283226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120898347-6	9.68365277839163	0.446556131554543	0.482789333566498	0.924950284745749	0.354991768314847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72747110118959	3.55212181296637
Merged-chr9-106295472-3	4.14275374722516	0	1.31940825374796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84514320-3	3.95207439954429	0	1.33543252721408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54740304-2	5.64491856215923	-0.999128342862039	0.630179568891151	-1.58546609916295	0.112860473454227	0.678908266440203	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3634795234692	2.0509200531463
Merged-chr15-84245985-3	3.65995197935199	0	1.31382153424331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91969537-3	8.22364821445966	-0.777523445587805	0.665620263701586	-1.1681186526142	0.242758907412625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47187835386595	2.31669796319085
Merged-chr17-79580444-3	3.79681416549595	0	1.3153920308706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17769000-2	5.29927583884807	-1.64424682387749	0.749217804886235	-2.19461792439271	0.0281910166808913	0.244093040417321	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27658541854641	1.46928333126936
Merged-chr8-109014934-2	2.72780718038941	0	1.35273251172718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76766885-2	6.43857856345267	0.898326143324524	0.650488479272774	1.38100238812657	0.167278226378307	0.895100145833348	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90594316755505	2.4044790941682
Merged-chr12-13215083-4	4.71382136220355	0.805046576238975	1.15426421922388	0.697454328767362	0.485518511759867	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.581381506691384
Merged-chr13-3776654-4	4.46033115547029	0	1.31287025255501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53421927-1	1.88020930507903	0	1.39970895640524	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172411363-2	1.71099254526127	0	1.60169037635755	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50472607-1	2.42363905796295	1.70499340395552	1.2645725928004	1.34827641660319	0.177569494397145	0.934933218989272	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	1.26428495695095
Merged-chr1-127850236-4	7.0224347789027	-1.53675312291877	0.932355431204935	-1.64824815889444	0.0993017580252956	0.617526901400929	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82774034224014	0.683637474991079
Merged-chr11-111954947-1	1.26402008443285	0	1.90441069797335	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86823361-1	2.5339057258857	0	1.37800332549661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32730946-1	1.74955749359575	0	1.48590066627218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34951452-1	1.25203477661121	0	2.00399957470774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118661547-1	4.35808408439463	0.137604598747601	0.82259732654131	0.167280629668677	0.86714924466717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5288881745083	2.44445968990951
Merged-chr4-141645178-1	4.65576027007555	0.209791883109662	0.797260427724987	0.26314097102287	0.792441926044713	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26690024091282	2.64492808120042
Merged-chr13-75778372-1	3.5726624628225	2.71417200365577	1.06913997067293	2.53864982893439	0.0111281142218185	0.120326498809459	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	2.16286647593625
Merged-chr19-25018503-1	2.30772611632854	-0.696256757718788	1.23257059924298	-0.564881847860412	0.572154131098914	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10620032636003	1.41926493179619
Merged-chr5-105844529-1	2.60134563701713	0	1.3544919288735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36507945-1	1.67903353212889	2.52359878190384	1.32424953746285	1.90568220755345	0.0566914490907953	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.15307255889252
Merged-chr5-9073419-1	3.2890915388527	0	1.32883209618358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148557413-1	4.14142653110753	2.04911664673625	1.13738925440453	1.80159662912329	0.0716088920129016	0.484054253042125	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	2.035112151504
Merged-chr15-63978196-1	2.17879659278524	0	1.37874938410066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122369774-1	3.20285989102411	0	1.33885809886306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68391428-1	1.27149968624046	0	1.41611773591964	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34457531-1	2.0470859114618	0	1.48929344418454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62926687-1	2.13161238497496	0	1.45145473392507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121369431-1	3.26194706342917	0	1.35624827538405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59748989-1	1.44993362939693	0	1.3836100717282	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-143216465-1	2.10148586473623	0	1.36820524419648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5793063-1	2.06340602988309	0.33019887060031	1.22039735943977	0.270566687191038	0.786724320172163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.832882082720823	0.683637474991079
Merged-chr4-11602647-2	2.73044069614397	0	1.38592022348557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105660784-1	3.33975982178131	2.14335560935181	1.06755270329109	2.00772814564021	0.0446721880420481	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4275215240199	2.87613732694396
Merged-chr2-78419094-1	1.212777596558	0	1.66179960556831	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56430311-1	1.96116480875957	1.27248650948395	1.39547119738649	0.911868702032062	0.361837839059517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr10-43846371-2	2.89651079354959	0	1.3380767228375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157427840-1	1.70395414495568	0	1.62239633870823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34639442-3	3.64722636096757	0	1.3364083900975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34203645-1	1.96997878986594	0	1.44661051255997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116483899-1	1.9143735646077	0	1.38320056844641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54223698-1	3.25616645006644	-0.94654905586114	1.23086712528864	-0.769009941377035	0.441887408895361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.990201747101619	1.22617999775229
Merged-chr2-167345219-2	3.63076058183167	0	1.42463608313707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-41602774-2	2.56838696638346	0	1.40682917475101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121248180-6	11.4296095337271	0.325472520941441	0.559759502197365	0.581450640254933	0.560936775962562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36063073211571	3.69937793024466
Merged-chr16-9515913-2	2.59083235405893	0	1.43859461379879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30079881-2	4.23041388942246	-0.841658640210623	0.975276567380525	-0.86299483486127	0.388140306818427	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4152472872351	1.37038362634479
Merged-chr2-36217802-2	2.74196201851999	0	1.3560037498099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100429148-3	5.14301482712199	0	1.33005858008719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110352499-2	3.04206224404339	0	1.37856584101545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36016532-2	4.24428931174377	1.11413924490187	0.996496437489265	1.11805642547907	0.263542895195991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56523429538055	2.25624284013603
Merged-chr6-134246208-2	4.61036693635951	-3.83216220799084	1.07365013735775	-3.56928395447495	0.00035795827602558	0.00852841033467675	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33607255521063	0.423054662900563
Merged-chr8-83328194-1	3.14311148038635	-3.97213305150919	1.28406996620271	-3.09339300509902	0.00197881892860137	0.0321581451649801	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4678554777757	0.306240821987646
Merged-chr1-161649575-1	3.42557023661982	0.511393277938254	1.28376797826063	0.398353352473505	0.690369737968075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	0.666688015277142
Merged-chr6-114836984-2	3.86363177711509	0	1.31800536038158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106981620-2	3.36575254054128	0	1.34262425385687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32754082-4	8.66704549828127	-0.054262798040309	0.564781565508983	-0.096077495007131	0.923459024989683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01856388823312	2.41932240981715
Merged-chr13-35947737-5	8.60044839068196	-4.09306217014127	1.02587798107879	-3.98981384300413	6.61251722679464e-05	0.00228625159101652	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01586223401583	0
Merged-chr16-92674964-1	4.87050924899923	0	1.31333218885548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123171783-6	12.971936285147	0.158086317467251	0.446907627790351	0.353733764287887	0.723538416270831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59373882127413	3.598187258206
Merged-chrUn_JH584304-106828-1	1.25904141680761	0	2.4332532392295	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26502835-2	2.72126274024488	0	1.33238176918888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47628284-2	5.67322935977248	1.56406543852556	0.849113450289961	1.84199818998445	0.0654754146339759	0.452278693939936	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23493194191394	2.25838937565246
Merged-chr11-44528664-2	4.13027768138837	0	1.29895375638553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35205283-1	4.27199719357259	1.32145788204214	0.863552317893908	1.53025804535503	0.125952868709879	0.734291828992987	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11459295742963	1.57074540165941
Merged-chr14-46145852-1	1.18197133174575	2.39685679708529	1.48572799895851	1.6132541075927	0.106689312534585	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.15692263537643
Merged-chr1-55804118-2	2.39368129771452	0	1.39132565801204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180289055-2	1.37991887153751	0	1.56998551170647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99465034-3	3.22005544418052	0	1.40067873003126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54088337-2	3.50131028841595	0	1.324610978239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86920527-1	2.19664428772233	0	1.41210683169935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28502298-2	3.02470702474212	0	1.34969971686221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81814452-2	5.02662755415134	-2.77010547086365	1.00103167042761	-2.76725058027418	0.00565312846737979	0.0714398694091962	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90919065426713	0.563523181795778
Merged-chr6-108331453-2	6.37588525501972	0.392752139384317	0.550252475078642	0.713767147213984	0.475371177568588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68958866371785	3.5253428955762
Merged-chr4-128796607-2	2.77020833670182	0	1.34097637365786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50676277-2	6.2862789696802	-0.299154106475374	0.701594126695792	-0.42639197663222	0.669822246829865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47454456461345	2.74516728405425
Merged-chr8-90001122-2	3.96786131191499	-3.46314394315988	1.09148857662696	-3.17286320472731	0.00150943626549598	0.0260733867843246	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47586607988089	0.563523181795778
Merged-chr3-15160086-1	1.48633297012334	0	1.39869957944995	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33260020-2	5.61009255294676	-4.65801062428368	1.05391840709369	-4.41970705979861	9.88347840747253e-06	0.000501822672894095	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47321160647147	0
Merged-chr2-4890601-3	3.42918140722091	0	1.35842800339002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8989061-5	9.81194376399189	0.556380963936649	0.659292677322203	0.8439058753033	0.398722004799981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90920283306514	2.89762895552055
Merged-chr17-66750899-1	5.22148586165776	-2.81468068947628	0.866973907600068	-3.24655755473402	0.00116809826951141	0.0214110938343598	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80423143561179	0.989878296978726
Merged-chr2-22816432-4	4.30298476748438	0	1.31427555658267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89022583-3	10.9166341775117	1.77717108828565	0.674615620403102	2.63434618846172	0.00842994882941344	0.0970855544953914	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57891980683229	3.80082899014313
Merged-chr3-59229328-2	9.60488810358956	-0.161732673189642	0.510186559260928	-0.317006926689587	0.751238346386448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47473687882948	3.36706866445826
Merged-chr2-23097221-2	3.01591758132642	0	1.43247479393997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80822227-1	3.41748880881058	0	1.34815057259822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3825756-1	1.65784910761342	0	1.54891932060384	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46342480-3	4.68175857904588	0	1.34362713947497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53179512-1	2.76797403991272	-3.78573094202161	1.20547569102231	-3.14044569311149	0.00168690980193958	0.0283958804527418	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98004665673142	0.423054662900563
Merged-chr1-62328966-1	2.68353503524497	0	1.36126493496654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99974589-3	3.64672874567893	0	1.36642545360993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34786208-1	3.91869553264364	-0.650168610336538	0.857929003121925	-0.757834981648404	0.448549777622258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67545529254958	2.55093367249462
Merged-chr13-21771641-1	1.84009684722586	0	1.67357395682232	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50946536-2	3.11832980207144	0	1.35417745742849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43788564-2	4.20173374757945	0	1.32794412996852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-33170683-2	3.17126482232257	0	1.334730958832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55789345-3	3.83320302197919	0	1.38846510648487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115040636-4	9.35909221943497	-0.639677544322326	0.560898133417335	-1.14045226077865	0.254097930809268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.34119724323849	3.75992885595473
Merged-chr13-58319406-3	3.40501521462279	0	1.31712054945225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41461927-4	11.8323505459251	0.317348653007624	0.480656426851775	0.660240111811692	0.509099755174374	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79972987875766	4.01238056998785
Merged-chr16-20047536-1	1.2749578076202	0	1.50286257425729	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75783952-1	3.20940870589397	0	1.33944931126999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76304879-1	1.43440499843716	1.82905607512966	1.56956128820886	1.1653295024987	0.243885641386535	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.622125941405109	0.961728545204858
Merged-chr11-118178428-1	2.85868827857647	0	1.37006560422921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47107601-1	2.95800171361332	-1.62618544564843	0.998667910007035	-1.62835456046342	0.10344972669141	0.637497721650024	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10761273193948	1.31470332505763
Merged-chr13-117203022-1	5.34741775365135	-0.165941584283584	0.659529488883091	-0.251606011680547	0.801345611441077	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47087849797351	2.18395292683035
Merged-chr4-150099163-4	9.23834230335477	1.37768642306976	0.563784641850225	2.44363950487987	0.0145399470119592	0.146345896608576	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94844887340304	4.16342327197556
Merged-chr7-24642655-1	1.9799467331543	0	1.45694432068144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117675790-2	2.68374815070732	0	1.34040017692875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141913723-1	5.21700944215729	0.180756027253843	0.687927980852741	0.262754288653561	0.792739970161491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1179568679404	2.26276386882201
Merged-chr7-16014109-1	1.97809038783511	0	1.47024567875596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-104486459-1	1.87661613272688	-0.758460129609783	1.98198096254199	-0.382677807680363	0.701958671103104	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6317193105452	0.843323834477631
Merged-chr10-67711119-3	3.0199942103278	0	1.36836405851624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45338340-2	4.51562291588523	0	1.33850295456842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97850732-1	4.9002428752126	-1.70963895750142	0.875521627196945	-1.95270899586453	0.0508540871354948	0.375577664778034	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66460427944591	1.15637648126681
Merged-chr1-180237640-1	1.67181480512399	0	1.53122433669415	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41299582-2	2.63284101352004	0	1.34417095677237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20468931-1	2.08731623641033	0	1.43130322772447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52047781-1	2.19993031820208	0	1.36799667108882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47013044-1	3.25489117588606	-0.47340298861798	0.853281260835877	-0.554802982728383	0.57902942675079	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89532666598153	1.21653520045322
Merged-chr2-180346870-1	1.74158178778866	2.44891370783714	1.71919577016133	1.42445307878307	0.154315358477098	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.845523456341755
Merged-chr11-97821032-1	3.49885462259857	-2.28609659258768	0.956618420186667	-2.38976852666248	0.016858994508014	0.164036309577231	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87888614167132	0.890396206374751
Merged-chr10-100030939-2	2.91239034272891	0	1.34972055206843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27399226-1	1.76744024500783	0	1.58058636340333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183116739-1	1.38791127524479	0	1.54588555851241	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173762686-1	1.52982915501762	0	1.60245393495239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55815010-2	2.55931896488745	0	1.36478784907957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181930349-1	1.82697400532466	0	2.30089631190653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16885936-1	4.08730233662317	-0.865476718515599	1.16335941670875	-0.743946115091509	0.456909075067537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961706022068083	0.469435083901436
Merged-chr7-75633484-2	6.05814915267337	-0.375371935145854	0.742359420124205	-0.505647163584251	0.613104366038652	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85816864539842	2.46595320137633
Merged-chr9-96438761-1	2.59676757795064	0	1.35095030930553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4199393-1	1.9794612025758	0	1.44148241074685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106500858-1	1.9269237458561	0	1.40217894288002	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65013681-1	1.89113065813245	0	1.42739479827824	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128458233-1	1.11235105743516	0	1.60772326299663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55684787-1	3.49612734170075	-0.549336560877327	0.911297379454755	-0.602807133282886	0.546637000808362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97316972243822	2.12643658929939
Merged-chr11-107466594-1	2.4816556843322	0	1.38002892345393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14883683-1	1.28587027276157	0	1.64107214379987	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133126608-1	2.09937133513918	0	1.36416224980611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30628770-1	3.0070933048332	-1.22134482362522	0.906683962869629	-1.34704579946434	0.177965482643241	0.936339164960162	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64588302992114	1.29606516661881
Merged-chr4-155506635-1	3.87756323651293	-1.06086294658706	0.676595205617462	-1.56794334009345	0.116894356011919	0.696696332356335	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23120545068616	2.08364730863447
Merged-chr3-133549599-1	1.13049729391884	0	1.53476382713322	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-175175450-1	2.44074841448224	0.826651772308884	1.54749751399735	0.534186171435943	0.593212735605622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	1.10459859746439
Merged-chr11-93972430-2	10.8422751631178	0.552021277660417	0.447107056634405	1.23465123054812	0.216960333711838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62737097787231	4.23140286551876
Merged-chr9-48448126-1	4.16505703424244	-0.44249330668021	0.826263054755895	-0.535535631338299	0.592279525638829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05017907268871	2.0894787037384
Merged-chr4-105222847-1	2.82290973070013	-0.818888914879138	1.14190511084129	-0.717125185888543	0.473296856539753	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96036547371637	1.54084633208408
Merged-chr7-130117342-1	1.81264376223129	0	1.40816431419164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53914383-1	2.41916140054012	0	1.37854795733824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84759243-1	2.49416811285056	0	1.40423528082259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166575154-3	3.98380316873875	0	1.31966764497406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43802230-1	2.60439466635431	0.868511724597335	1.24081297748413	0.699953772532531	0.483956174330331	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.733321818366247
Merged-chr17-34052032-1	5.08440080829027	1.98621883203975	0.898440110960745	2.21074149273655	0.0270537434506896	0.236533839915542	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74788055951643	3.49000549845662
Merged-chr13-56421400-1	2.42843184346132	-1.59658916518345	1.33164225547362	-1.19896252812704	0.230542516429617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36006734970013	0.306240821987646
Merged-chr1-165683529-2	3.7265453049179	0	1.32035155659893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101132719-3	3.94827834218018	0	1.32784307872516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98316073-4	3.59695581684992	0	1.32135334673059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101232373-2	3.41557073538726	0	1.32377450360097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69092925-2	3.57000045951964	0	1.33894820322045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155044714-3	3.89432873222656	0	1.32630042929733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117825586-3	4.34227473804263	0	1.32126669767688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32963986-3	5.84387060009643	-1.77717922545183	0.724010897801864	-2.45463049084957	0.0141029469027468	0.143012285584558	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15846383803699	1.76901627090616
Merged-chr7-106810273-3	3.10867151789584	0	1.37736946577792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11788000-2	3.88741281373042	0	1.31299683745415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20430517-2	5.7004710431268	-1.67715185339956	0.856288620862648	-1.95862914972518	0.0501562332633196	0.37155755796677	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56315929005761	1.47158896970822
Merged-chr14-121000363-1	4.60145989368922	-1.02445931382039	1.2201057870308	-0.839647942588215	0.40110580994013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53601963382306	0.869764003783424
Merged-chr18-6470795-2	6.57637198622308	-0.0361081432376296	0.640180107525694	-0.0564031009604283	0.955020686680753	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27521313364206	2.6132745855972
Merged-chr12-111894207-2	2.72647748157112	0	1.33209353386817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184908797-1	3.76372917545399	0	1.34520087596267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38002279-1	3.168979502003	0.798720704887968	0.925040327693176	0.863444199108358	0.387893287022825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18231512369823	1.42690496303314
Merged-chr2-167227642-1	2.29004684222024	0	1.41315469804078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49164519-1	3.52052180538053	0	1.34946646639238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51995379-2	5.13754313912564	-4.1491882076524	1.03138053957907	-4.02294599173432	5.74746796743809e-05	0.00203784070428763	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53799361573483	0.420961122473315
Merged-chr8-105453433-2	4.17779559002282	0	1.31974466301337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141403524-4	3.94978588333854	0	1.31616411059383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107455465-2	4.58989707867937	-2.66261963583806	1.06890850193497	-2.49097058449634	0.0127394666496249	0.133089238638911	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80232497412955	0.581381506691384
Merged-chr5-67764973-1	1.84722849348391	0	1.3715133403878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84622541-2	3.92721685236135	-1.61370791262626	1.1521291962752	-1.40063103846629	0.161324434347016	0.87289115565456	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71722438768031	0.61242769162773
Merged-chr9-104272343-3	5.10236780522514	0	1.32184008728433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113475449-2	5.46192095449561	1.70448216475737	0.799988392943893	2.13063361892666	0.0331193376709773	0.276186996256856	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92552965452797	2.93952175590133
Merged-chr12-111524998-1	2.58379503059838	0	1.45434941136394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46458637-2	3.32894502224392	0	1.32119363679934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164706222-2	2.61943896370737	0	1.40406233934317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59778693-2	3.1116400629172	0	1.32557566058016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153895150-3	4.16576034170922	0	1.32658959173635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9485774-2	7.82539165641997	-0.0413190386147565	0.619297881545862	-0.0667191667305851	0.946805275465283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9253140993887	3.35441732747624
Merged-chr8-79391607-2	2.97260855870527	0	1.36235883451832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36698784-1	3.39283308049393	0.356538029980889	0.660423017012131	0.539863119238226	0.589291433821347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82113723934306	3.01944155124387
Merged-chr15-97140224-2	2.41958878192317	0	1.39044138025585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15914426-1	2.23488528339306	0	1.38154171508246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113245753-2	2.72014700670538	0	1.35976004103371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87838818-1	5.46277524515832	-2.18024887076531	0.774327204371734	-2.81566869723285	0.00486758340526462	0.0637812522960542	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46644224792298	1.20275690226768
Merged-chr17-12029506-4	10.357046266948	-0.396028780374878	0.577309573463844	-0.685990322313061	0.492719211138516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1053803996829	2.777595139262
Merged-chr9-105121970-2	10.6040999584412	0.594195342779737	0.510451639123992	1.16405805611568	0.244400485049376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11887678028847	3.67601824743674
Merged-chr11-89020156-4	12.5838867195141	-0.142018738416599	0.534725828378989	-0.265591693685578	0.790553683395704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79460674065894	3.6460552043594
Merged-chr4-48380784-2	3.27082748604118	0	1.32772163509493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98829588-2	3.62878372076074	0	1.30833597718932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96999111-2	3.23301008242674	0	1.33003506389336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-117779201-3	3.87406430559576	0	1.33222380906534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61860835-3	3.52816456621261	0	1.34489722644703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105199511-3	3.7733171587854	0	1.33861483294931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88559332-1	4.30330977283605	-0.41599989051893	1.00954905022894	-0.412065060558072	0.680291737044459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18703110448508	0.851599296279844
Merged-chr1-191333585-2	3.37828591759676	0	1.32604046424179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27725894-2	4.0138636020248	2.49062115283787	1.22042057114138	2.04078922605225	0.041271781932563	0.323137542688443	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-81517441-2	2.99059413310216	0	1.33761958975101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64829885-2	3.41455673072272	0	1.32746836560636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57517310-3	2.74336637982303	0	1.35213953224824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53496374-1	2.23637288658336	0	1.3680255544723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93820925-2	3.61366714172471	2.85218881632205	1.22178070683322	2.33445232877735	0.019572049466126	0.184314043005255	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr8-71741972-2	5.99179367845304	-0.824120771306359	0.841630828390364	-0.979195085905428	0.327483596235426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81876064136227	2.62703785442709
Merged-chr9-13492997-1	2.02130257603777	0	1.39908360053626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129747567-1	7.16277853460225	0.769991011716412	0.666089019070609	1.15598814823697	0.247686004782353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13101528620692	3.53339859656585
Merged-chr11-58235435-6	11.3819074385972	0.0258309339813	0.469101328834309	0.0550647214014262	0.956086901725985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.05557517139669	4.16930775921503
Merged-chr8-70503246-3	5.20837651198208	0.907431172783472	1.13529489728571	0.799291157700946	0.424121604853085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.733321818366247
Merged-chr10-40192702-1	2.66563308434161	0	1.35536084359273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56799844-1	1.70919100993509	0	1.50103550675957	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43916217-1	1.6099286774759	0	1.64582315895376	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114665866-1	3.38694254123568	2.50100131964472	1.25649015692059	1.99046630478521	0.0465395922163996	0.35194725066229	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr10-43829158-1	1.90401483105299	0	1.43663836282761	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13087398-2	3.03121476468455	0	1.34442575931454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110193269-1	1.28323714148388	0	1.47766861651359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102138552-2	3.41578657407822	0	1.32119545087357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83598231-1	2.6381856207855	0.0938343465493306	1.40606280277709	0.0667355301370606	0.946792248389981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41462080138558	1.69486619385668
Merged-chr2-155033620-1	3.37367281177733	0.982807563884388	1.05713761333285	0.929687442286613	0.35253293823391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.705103018524376	1.20539659680455
Merged-chr2-102829316-1	5.63011106272302	1.57499732149864	0.886639646796392	1.77636690079157	0.0756724629295128	0.504321422788833	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00438675778585	1.7464719987851
Merged-chr10-121533472-1	2.13166191413656	0	1.42168770249239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82834671-1	1.51023597060378	0	1.48485417963759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10314628-1	2.03130986761973	0	1.4127603303132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124508552-2	3.86055607570699	0	1.31406105808214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148675952-2	8.36979236410216	1.57547719067186	0.676070043424297	2.33034610244238	0.0197878659500869	0.185757490069585	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60533640573841	4.02420982313703
Merged-chr1-39736457-1	2.20016364403472	0	1.47933896668791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116004180-1	2.62474766130888	0	1.34277829346777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129904863-1	1.28419403653884	0	1.73344834016704	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119761922-2	2.57173306273452	0	1.38572578608679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73692477-2	3.28364898985687	0	1.33033804483843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86493314-2	4.71137462835311	-0.351633639036927	0.618370098916348	-0.568645928470897	0.569596449476711	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25461263911088	3.23403801052056
Merged-chr8-83877066-1	2.74389587515164	-1.70114054264591	1.10999910086412	-1.53256028885211	0.125384232269022	0.732339059959405	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45694900931177	0.73596151290311
Merged-chr14-40914936-1	2.15302256701938	0	1.40999161545641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87740716-1	4.45912189727999	0.674029860689399	0.855432188328626	0.787940727372374	0.430731377022777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.964582177197551	1.87496859647037
Merged-chr2-166108527-1	4.72426784053587	0.501959731754132	0.842094701460412	0.596084657561202	0.551118673062882	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17514715678456	1.31495854024319
Merged-chr7-45731245-1	2.89438184682621	0	1.35476833539114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8975080-1	3.99313789859527	1.78067959993016	0.909713961501602	1.95740603671831	0.050299749318123	0.372409632782921	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11783078377328	2.34310688897156
Merged-chr12-108763726-2	2.17847686050188	0	1.37114548646792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70111965-1	1.92449297131879	0	1.43580754793327	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47535586-1	3.86500179164596	1.07580929541719	0.934838144768815	1.15079738822942	0.249815599530737	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19074409479464	2.12465288650598
Merged-chr9-116140628-1	2.95400494924717	1.83238680337554	0.966975916212272	1.89496633024032	0.058096862470716	0.414363411374308	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.79695861841345	2.25838937565246
Merged-chr10-127129646-1	1.65758546649058	0	1.56248030818507	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70930321-2	5.77300203154249	-0.651316630270427	0.817679496699054	-0.796542695395654	0.425716669738209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19710081200935	2.31260716574699
Merged-chr4-153514202-1	1.70904094404802	3.35817203930544	1.47460115486863	2.27734260767252	0.0227657744501712	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.38601560292234
Merged-chr5-139584027-1	3.03256374608202	-2.64627401269531	0.982337401372694	-2.69385448319231	0.00706309939446691	0.0846250995656096	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26343620345776	0.683637474991079
Merged-chr8-69985324-2	3.00572686619048	0	1.32524062444097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79813995-5	7.65261532801144	-0.54987197942847	0.641057762586061	-0.85775730600353	0.391026489201746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28045884247373	1.99834080004871
Merged-chr4-105495831-2	9.15106179499908	-0.296137240339919	0.554749998476689	-0.53382107463379	0.593465331571268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72987723369336	3.18700239381742
Merged-chr6-113837964-4	4.81633632561831	0	1.34453714865782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37302884-2	3.23769365690855	0	1.35414625765697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123940028-1	2.45665839325495	0	1.35925737213603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120189977-3	7.719511574971	0.343086730090474	0.659241929206699	0.520426136279482	0.602766597402279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90614646718748	2.10061834270669
Merged-chr6-3590521-3	2.87012300002908	0	1.4039749058211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114190950-3	3.60340491487136	0	1.31868233880647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105559327-3	4.19385332095098	0	1.30533645399863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76783796-3	4.89340997585703	0	1.31500262061689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36061391-1	2.87363540523876	0	1.35776059560636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28180252-3	3.39838299097921	0	1.36226320201669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85480181-2	6.45213565570747	0	1.37704213828349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116171141-3	10.6272219083818	1.89843123541444	0.614016158825354	3.09182618100188	0.00198929295438347	0.0322721790956163	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47719780673461	3.71474137709687
Merged-chr13-75795422-2	7.1718524499852	-1.80850548829066	0.702145271808268	-2.57568563216716	0.0100041556714096	0.110990077504912	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60240380213215	1.69757189012738
Merged-chr6-72051935-3	3.44034848997622	0	1.36229122853614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90240413-3	3.63892155962828	0	1.33129742044988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57674078-2	9.39042545229841	1.17570098319116	0.668564227775407	1.75854605189274	0.078654643034401	0.519007643650851	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09859133665708	3.35979880313945
Merged-chr4-3418898-2	4.80862417859444	-2.34515727984146	0.922943174850524	-2.54095522210375	0.0110550076742067	0.119900503149993	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01880578990538	0.73596151290311
Merged-chr18-84846682-2	2.26670537057227	0	1.36634896259119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57788166-2	7.65719176763563	0.296793668627387	0.740691751772118	0.400697952849216	0.688642518186369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36214047597265	3.12402404955102
Merged-chr5-65577025-1	2.10566963193629	0	1.34402272612174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70289498-2	2.82815882945721	0	1.357911316653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9555557-2	2.9412938447719	0	1.34450935126487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17676612-2	2.32048542049539	0	1.42760233541229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44692062-1	1.8502903080453	0	1.43805393362469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83625418-2	3.48489609959142	0	1.32298636985937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35478187-2	1.56523892261235	0	1.58739092504848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98584745-2	3.08227108794017	0	1.36232284028652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54995379-1	2.74377879652139	0	1.34136927189748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142294012-1	5.22724896282853	0.163711845967378	0.854352184836788	0.191621030381813	0.848039067917558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03158044388347	2.42763579811059
Merged-chr13-37482774-3	8.45319273622917	0.930889191274407	0.586327198947257	1.58766162126848	0.112362875878581	0.676974413347016	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90269114469607	3.83073178516983
Merged-chr12-111738955-4	4.92774135997674	3.42651403397841	1.09874278221145	3.11857705866503	0.00181726614669208	0.030139866401457	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr9-47732109-2	7.04147721727834	0.225543442653184	0.710096646123614	0.317623585302671	0.750770481422028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42701689959124	3.3194495740227
Merged-chr2-122143948-4	4.49378548594993	0	1.32046781728701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80099921-2	2.46644774247907	0	1.37238431733246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46923589-2	3.53265784569198	0	1.31667951717107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24395015-2	3.06150279721333	0	1.32984302802576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101381724-3	4.80687201267503	0	1.32823568938197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61919316-2	5.20160223532506	-1.48256680775496	0.830186197098624	-1.78582444870356	0.0741276868222502	0.49707006906996	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30044991389547	1.31016258956889
Merged-chr2-142883040-3	4.7711844137313	0	1.31843342005273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49983056-3	3.44755016081514	0	1.33004717867864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-17166852-2	2.48503145796	0	1.33743017773189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31018493-3	3.76503035282322	0	1.31154849475018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68128074-1	4.28053873464305	-0.663503008360082	0.990137553698064	-0.670111951498017	0.50278642666695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39588836943915	2.77917504929676
Merged-chr2-4591158-1	2.70362666187886	0	1.39204905988315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44985147-1	2.19255011694534	0	1.37772742463985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56874721-2	2.9839217689579	0	1.42235481121613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42795687-1	2.92989070737643	-1.47100956211826	1.08197205244119	-1.35956336284224	0.173968138568998	0.922063588525405	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59560427451065	1.40264952818025
Merged-chrX-10721519-1	1.94049579690934	0	1.41029189322941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62937900-1	3.28898978801436	-0.668740275921912	1.02456397522081	-0.652707192616044	0.513945064637463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54578881129552	1.88508609669565
Merged-chr13-92702767-1	1.53166006397892	0	1.49681703411774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-73087365-1	2.56111539873354	0.386220803096054	1.1569483151519	0.333827188334984	0.738509965868269	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11273554118581	1.29948469469889
Merged-chr16-93835341-1	2.61563715651434	0	1.36981324788444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-51750549-2	2.30221332696249	0	1.44743548825016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109212975-1	1.49979211971759	0	1.49886641209553	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29444902-1	2.43578367920355	0	1.32633678282392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67273021-2	4.4256884503178	-1.66780329878819	0.96726441989676	-1.72424754232787	0.0846631648214493	0.547065892752498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56591846126477	1.51541939634152
Merged-chr8-122415774-2	2.67780195074757	0	1.38517437810626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29501703-1	3.41829779187207	0	1.3266446647703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81124080-2	4.04256042520071	-1.44039092131419	1.15607891338247	-1.2459278554782	0.212790882525007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06530600001239	0.382164212378408
Merged-chr14-33231637-1	1.7378565318773	0	1.45688602601669	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132168669-1	1.72460981699391	0	1.51612346717269	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73428589-1	2.19168773755222	0	1.37863268790509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125120207-1	1.62360542030129	0	1.40274919144083	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63556550-2	2.90428410093616	0	1.3410871477146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62557225-1	1.25941190150443	0	1.71773024244981	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42302556-1	3.26410174271515	-0.00123995736218164	1.12299770384932	-0.00110414950799224	0.999119016333763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	0.683637474991079
Merged-chr2-21056390-1	1.88727351293288	0	1.43848932237818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123642607-1	2.47868132289151	1.91775048910858	1.50883018586882	1.27101810864441	0.20372220645299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.705103018524376	1.62354617165363
Merged-chr14-22023696-1	2.33568613450384	0	1.39808655132662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-187586780-1	1.34702741408282	0	1.51678749456952	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89511061-1	2.08915610585989	0	1.46804214147484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124720442-1	1.25219149588928	0	1.55240136746266	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171110380-1	2.24598793598019	3.76498363222594	1.45725756020324	2.58360892065014	0.00977725893367535	0.10908396146149	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.8499596259337
Merged-chr5-48838992-1	2.15136093721687	4.11323613645858	1.51817550166097	2.70932848801635	0.00674195527414598	0.0818878187406091	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	2.30166531184945
Merged-chr9-32137993-1	1.59404005044183	0	1.52241913258744	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73996681-1	1.54236261639999	0	1.53761575042814	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8038013-2	2.52564231289466	0	1.38996284291251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52914143-1	2.21275687231272	0	1.34562684607685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76622299-1	2.66412610469791	0	1.33828658982393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109707604-1	1.8374160396213	0	1.41741759180725	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65038866-1	1.75965365264635	0	1.41323732600689	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122466396-1	2.79698685453501	0	1.33403289320801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66231735-3	2.54340478328723	0	1.3896305358272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-112801746-1	2.41494956828658	0	1.37981213652648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110630726-1	1.63695147478384	0	1.50058121501493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75098518-2	4.39684962521754	0	1.37962563794857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90868345-1	1.82030989032507	0	1.37535124734041	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60091243-2	2.9080811449576	0	1.4172608788918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95529233-1	4.27819297103962	0.242251450797356	1.10755861735069	0.218725624993851	0.826863786411881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4573873676855	1.26927213904674
Merged-chr19-61111180-1	2.23603640252396	-2.24552289944482	1.16709215816556	-1.92403220579798	0.0543505467331824	0.393658925607021	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63035642963927	0.733321818366247
Merged-chr17-84037969-1	1.74303078285478	0	1.41019576221887	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145107063-1	2.18536721360539	0	1.38879984748669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14678092-1	2.01620461340069	0	1.35159855083109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84194471-1	1.25637187534095	0	1.45812926940617	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24318859-1	3.36489186058311	0	1.34104797886857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88628723-1	2.84539888056746	0	1.41184991524299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70650164-1	2.36685160133137	0	1.35858829223241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-43416067-4	5.33896707744593	0	1.31473260802539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55622251-3	10.1112845004758	1.0670801892107	0.599121300041843	1.78107536676825	0.0749001393170751	0.500657171012028	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70129454465357	4.04105997869936
Merged-chr6-108566331-2	9.96037837789825	-1.31756001375205	0.594960438330308	-2.21453382253389	0.0267920786988381	0.234717143672647	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87219025545842	1.69733277475078
Merged-chr6-116670331-4	6.75131279259284	0	1.30144794411745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80877869-3	4.80468271305504	0	1.34910126540751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101772877-2	3.11599212631204	1.90390396948524	1.28989023293431	1.4760201456477	0.139938484151904	0.789060331813819	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr4-136570229-3	7.19074150043628	-1.48570889638748	1.18184311825111	-1.25711177181117	0.208713165083609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	0
Merged-chr10-88120743-1	6.66239499965173	-0.837158964529424	0.732440301152747	-1.14297228485634	0.253050098328181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7152204830018	2.41013160564203
Merged-chr6-83600067-3	4.73774390340078	0	1.33796014184145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43804331-3	3.59838269444356	0	1.31498022201992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34420172-1	3.72485950662112	-0.632963162716177	1.11926435838854	-0.565517125576556	0.571722079225855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860868482386745	0.61242769162773
Merged-chr4-128680682-2	3.85393428903094	0	1.32630602584256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103915871-1	2.2078032126212	0	1.33828403202673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36311635-3	3.76144689572671	0	1.34857365905448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24021509-1	4.63502721195775	0.139203426960175	0.873337927063115	0.159392398573932	0.87335972741008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74789195416179	1.26501898168246
Merged-chr4-129787285-1	4.13363351085424	2.51045296504768	1.28880768008486	1.94788796174956	0.0514283705425564	0.378351815170201	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	1.69442907999601
Merged-chr7-107611048-3	3.36226792681865	0	1.31879243422139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98036181-2	4.5571211606121	0	1.31502913941326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121674311-3	3.0552153716732	0	1.37323013829038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83271274-3	4.96591320856168	0	1.30445692827577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33802378-2	6.38459325794495	1.28956715177304	0.810491477763699	1.59109279635019	0.111588693473777	0.673806550107646	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.817773273751962	1.50921536809972
Merged-chr13-91452467-2	2.46518303744018	0	1.34709256809813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132871503-2	2.93077001326122	0	1.45932597801816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73367810-4	4.26258098399121	0	1.30584758818529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41992797-2	5.70735866976661	0.376230521246648	0.626260327687429	0.6007573921151	0.548001586848583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01255375764703	2.20119714125484
Merged-chr1-188980267-3	3.75032866995419	0	1.31412166051003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23979531-4	8.31518579727354	-1.0197187016088	0.527213925327895	-1.93416496154686	0.0530928488959209	0.387037628731911	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38173428409176	2.79125192100576
Merged-chr2-127080870-2	6.0250486122534	-0.988704139581484	1.0119448709325	-0.977033599340641	0.328552518610328	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33236987469431	1.15025660736152
Merged-chr2-127087469-1	2.51908379094427	0	1.35290301143357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-130106808-1	2.00619661753553	0	1.34348590625532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79831795-1	2.65538837707749	0	1.33995574224537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118865258-2	6.89334176901179	-0.123842479158573	0.589278659544073	-0.210159450291972	0.833543226756532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42318115147068	3.21212669873896
Merged-chr1-43478072-1	2.75980644619125	0	1.36744105048719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66542908-2	3.98670823082997	0	1.3169369937243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35129357-1	3.66131782475515	-1.27390272643785	1.07387909344016	-1.18626271264572	0.235518567001757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47969070366747	1.97898450809916
Merged-chr16-89833759-1	1.49530035049312	0	1.46068211422242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100849589-4	5.30532367127542	0	1.31616384973959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108082565-2	3.73028422111884	0	1.31958462408461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19561454-2	3.9729443621508	-1.16176582794533	0.987829998169537	-1.17607870797415	0.239563425433353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89677430854111	0.845523456341755
Merged-chr19-34241423-2	3.21733755884941	0	1.33570226567418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134016347-3	14.1683028274722	1.06618347812784	0.557922271520316	1.91098927673659	0.0560059589515628	0.403235499520584	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81777296032303	4.08601581051897
Merged-chr7-59163096-1	4.51176553663843	1.4670381724967	0.846947160520722	1.7321484041516	0.0832471428065433	0.540420007335225	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06010594835573	2.94640134381309
Merged-chr6-55182562-3	4.58247622210044	0	1.3262880936138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-71306358-2	3.61680429365258	0	1.32385119195014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33190880-4	4.87660298319811	0	1.3401599207226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16533582-2	7.5005788103964	-0.869329306061765	0.693671140050614	-1.25322974514744	0.210122107756207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.8751214459107	2.60000191931229
Merged-chr5-100618172-4	8.04896920913777	-0.900927156484531	0.689928254195562	-1.30582731031213	0.191611290450373	0.987544597344402	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45118111647612	2.35950768455674
Merged-chr14-121937826-4	11.3853305194024	1.90912023834514	0.553213805219371	3.45096275677376	0.000558590645789787	0.01198741029221	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25848445916315	4.11019498436226
Merged-chr10-121256649-3	10.9601282063336	0.465527385109886	0.570649981254355	0.81578445702671	0.414623424428245	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44150416472652	4.15625035542923
Merged-chr5-132437148-2	1.96125473504981	0	1.56964182610544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54770037-2	3.10050559760407	0	1.37352895361821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100352279-2	3.15023595563172	0	1.38316433562959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-100397247-1	3.69115057713213	0	1.33721401151913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126982454-1	3.39107250387257	4.67621203177838	1.2153206686067	3.84771867423221	0.000119222846097717	0.00364223286634007	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.30878529292621
Merged-chr7-92654085-1	2.78450757739631	-0.196342233957832	1.05397533892114	-0.186287313096727	0.852219456007651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49900598108001	2.15292080626044
Merged-chr6-6307789-1	1.18149692002409	0	1.58954025916903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34230814-1	1.40472723604802	0	1.45104595574159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84938129-1	1.39134048786291	0	1.61102606291703	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34269778-1	6.53052065611641	3.05155833656224	0.708849893408905	4.30494292929509	1.67028789380659e-05	0.000763797289773865	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28815185520248	3.85627742079238
Merged-chr4-134638529-1	1.5801992128672	0	1.44500421144482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57842002-1	3.15858444609402	0	1.37579703605409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142831467-1	2.45309399167513	0	1.34914382494142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10320535-1	1.23059460758379	0	1.46899239231071	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10153069-2	2.25779858628839	0	1.39090130116897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103439842-3	6.58342549357314	-0.846395347069671	0.810243607361295	-1.04461835845408	0.296199391256628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92202795376013	0.926147595614233
Merged-chr14-76613983-1	2.03179290508216	-0.563086076121263	1.36336168056695	-0.413012984116662	0.679597100842279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	0.306240821987646
Merged-chr6-115375072-2	3.25707364673795	0	1.34304071042167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44660489-1	2.8796167702218	0	1.37797730949896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102002536-1	4.37147552554756	-1.55932416806044	1.17926600020955	-1.32228366440087	0.186073710323822	0.967698278575691	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.89544522622072	0
Merged-chr4-132063216-1	1.41808361381645	0	1.54361186313436	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36237279-1	2.31951843430573	0	1.38970846480872	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121831086-1	6.40862090029167	-0.208199560874775	0.817707872143566	-0.254613619322257	0.799021539104117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69824688492622	1.67800608098903
Merged-chr18-75353555-1	1.54241217553189	0	1.4909597801167	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43492842-2	4.05947145192664	0	1.3256391739229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90710525-1	2.61920991690128	0	1.33870073991726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62896081-2	2.43135540987926	0	1.41215743455425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90132945-1	2.47178986439348	0	1.4491950732364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103025989-1	2.58350434872411	0	1.39796698698971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-91576094-1	3.49052084065126	0	1.30863380661149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17297175-1	2.78072377816874	4.76079254446329	1.15182652818594	4.13325481568935	3.57661812770226e-05	0.00139449694613862	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	3.85259595149253
Merged-chr14-21877581-1	2.98540342772624	-1.6476229063353	1.01240707691253	-1.62743124174908	0.103645540751271	0.638403384478517	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13981229101093	1.27256041875316
Merged-chr17-13146496-1	1.47457092524518	0	1.54611256681123	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-8780654-2	2.84189065109567	0	1.34735307429017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76897469-1	1.11563383090597	0	1.54970662454416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39240054-1	2.42565048358567	0	1.34616714647055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92959185-1	2.7697849069418	0	1.3788074353422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173730242-1	2.91495420639558	0.178237420292364	1.0986296338713	0.162236130172732	0.871119908904588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73467303592413	2.21043983090998
Merged-chr15-36702048-1	2.77294023882955	0	1.34637859635186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3006851-2	2.52365003052947	0	2.41027565340822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11532358-1	2.01595376956789	0	1.37248052172029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94041617-2	5.32001897852513	-0.835544977575294	0.978062767110413	-0.854285640627981	0.392946741429267	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.846438389249	0.73596151290311
Merged-chr5-64300444-1	3.47188013793957	-1.19716531221135	1.18729733601386	-1.00831129313456	0.313305043183244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8296727007877	0.735627456805112
Merged-chr2-133442734-1	2.50399194854227	0	1.37262177255763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69655569-3	7.5870398437861	-0.668697968217635	0.624956692028926	-1.06999089176356	0.284623408530064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6781743706029	2.90466517893628
Merged-chr4-3089724-1	2.33144980063897	0	1.40254400637492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110961919-1	2.85294831730143	0.475677654834675	0.967596031897383	0.49160769489919	0.622996702621746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19359745190382	1.60308582214967
Merged-chr8-106343042-1	2.3510283294183	0	1.33937539213555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146706225-4	9.75862208551226	0.681815277567748	0.461927265557582	1.47602302008466	0.139937712525204	0.789060331813819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27188341073754	3.96247889612542
Merged-chr18-38425145-1	1.28954341392566	0	1.44360250377985	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-90639998-1	4.55314512237603	3.85549775017136	1.46753165296302	2.62719904022985	0.00860909600585109	0.0987044018795547	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	4.33222842662148
Merged-chr6-17516213-1	1.56499024615641	0	1.58257862080918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84943812-1	1.03837141818937	0	1.60952637239995	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74497510-2	3.49534099995653	0	1.32294907613905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24935475-1	2.33560903751317	0	1.37546131826019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67545335-2	2.90573690988929	0	1.35047066678008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-152920559-2	1.89188469599615	0	1.55170920554935	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54764660-1	1.66146145923035	0	1.6891379748281	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119955193-1	2.33586906236803	0	1.3734364752022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113518329-1	1.38174378323437	0	1.4516848885135	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24712385-3	2.3875258116538	0	1.41468999009214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76202436-1	5.04333997410442	0	1.30917552865927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32172524-1	2.53904723591837	0	1.3386724952854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108753699-1	2.63227871801234	0	1.34552309594103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115670726-1	1.09897983324356	0	1.47974796157251	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20757220-1	2.67371978964503	0	1.39569256766526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9985809-2	6.39887824089664	0.620310093498389	0.822055346576017	0.754584342869459	0.450498421058191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30780075666497	1.63412505265868
Merged-chr18-44400601-1	1.80959803940952	0	1.42502041970098	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35539208-1	3.80616698406142	2.40228649207502	1.12138735532674	2.1422450330511	0.0321737694456254	0.270547823728457	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.961728545204858
Merged-chr10-19121794-3	7.00405208638434	1.70363566159475	0.634850982096577	2.68352055779853	0.00728514961204013	0.086618520114333	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4598171609825	4.45987284771395
Merged-chr6-143349165-3	4.20474229113718	0	1.34560910863037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81123752-4	7.49203398490091	-0.968887853541148	0.580977606800145	-1.66768536721665	0.0953782017054459	0.598251484799776	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53358680197705	2.68584536307091
Merged-chr18-23763256-2	6.60373254878895	-0.991212037442785	0.739080485805598	-1.34114221181522	0.179874284438537	0.943794444228457	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14421890691516	2.0509200531463
Merged-chr4-47322607-3	4.97240020377611	0	1.30283362280557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127593655-1	6.33816281121911	1.17242740350162	0.67371408551609	1.74024475472188	0.0818160501024331	0.533855692008849	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75413978475362	2.59112047591875
Merged-chr11-101641481-3	2.81278678831069	0	1.34950092528573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65522972-2	3.59639531045155	0	1.33947504966192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76851659-2	8.8842573204806	-0.414174037685986	0.557973720672893	-0.742282337574086	0.457916290825565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84111438823617	3.35551030710686
Merged-chr15-39362255-2	3.93901975447388	0	1.33597618717603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37749257-2	9.83490481409241	1.44609971918649	0.521750412985284	2.77163119222539	0.00557761913338942	0.0708181897454789	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74889301746069	3.37095029208204
Merged-chr3-79059204-2	5.55606726372015	-1.51293909053683	0.940806806053108	-1.6081294063804	0.107806840025144	0.65673028510143	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59189163028065	1.62042974503458
Merged-chr19-46876018-3	3.70887626652151	0	1.31216722813489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59037706-1	2.10190551199647	0	1.4448323034988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83278398-2	3.4872501360579	0	1.33553482630807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85439975-1	3.55635501854632	-2.21588944782663	0.908239506971517	-2.43976333425025	0.0146968867404418	0.147388391795719	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19774522878404	1.00443616959195
Merged-chr15-53723844-2	2.65890853027638	0	1.40776704662652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96402045-2	5.74825161288957	0.810820323213953	0.785711839236308	1.03195635183765	0.302092565406408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83262013998806	2.4555271198677
Merged-chr12-85364626-1	4.16098493192854	0	1.34803909525198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25310404-1	2.70887027804815	-2.26575456850433	0.98463606410023	-2.30110865436845	0.021385490279395	0.19740870854603	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24554508737337	1.15307255889252
Merged-chr10-61344221-2	2.31604468123653	0	1.45280231745157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17137031-2	7.11727941972081	-1.61924345738349	0.740909105560292	-2.18548192380358	0.0288535299002066	0.24857782002095	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20809866415853	1.55500983080492
Merged-chr6-97363395-2	2.84828581174998	0	1.38322949953356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31918599-2	2.99211760148738	0	1.34187882251169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76699812-2	3.59999696224514	0	1.38550307965628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150156221-2	2.9735939133751	0	1.36529785982984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-57243824-1	2.79349354129482	0	1.32532908875091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135026382-3	6.92587053078961	-0.39536822350066	0.693924447040454	-0.569756873658049	0.568842609625118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59280621228721	2.25104685314663
Merged-chr6-134454140-3	11.0221274671411	1.14816017366806	0.447796565948414	2.56402183709538	0.0103467034646114	0.113881705339144	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59966289037481	4.72938612352914
Merged-chr10-94858875-2	2.57172206159573	0	1.41803633879254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3721266-2	4.52275070983325	-4.39501200718062	1.05378419011528	-4.17069457713141	3.03672638267997e-05	0.00122492544569509	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16408393475819	0
Merged-chr17-32275572-2	3.98735421105852	0	1.31207616720055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30222924-2	7.46181162287882	0.795881508722235	0.777926481904194	1.02308062167274	0.306269728432645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89074461685849	3.12740825825653
Merged-chr15-103552302-3	3.80526769099228	0	1.30771623267753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8869066-3	9.61785512678938	0.48356692388536	0.514499656613186	0.939878030373337	0.347280127679786	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98025070250617	2.85783341354092
Merged-chr4-43420534-2	3.74470106837984	0	1.30895217257441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88725597-2	2.83803510329094	0	1.45331492665059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-78736546-2	6.7734241546927	-3.16923844683673	0.934585689856198	-3.39106245819403	0.000696222327181847	0.0142440025648168	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87025062702193	0.733321818366247
Merged-chr19-33366816-2	3.65720075027063	0	1.3387033387833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126301404-2	7.16395039198677	-0.614431874619723	0.628081708445767	-0.978267423421992	0.327942077383742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85289831022484	1.486851288245
Merged-chr8-27192432-2	2.86092710173807	0	1.35399725700677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37702552-1	1.93495980955423	0	1.39706561090345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76804080-1	2.47896462538002	0	1.36817527115143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40815284-1	3.35192979888208	2.34475484742371	1.21729157090683	1.92620642700825	0.0540786036464821	0.392391086108303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.63879159991986
Merged-chr8-71616759-1	3.50397065731844	0.30061003533486	1.15312226783256	0.260692247232286	0.794329845200202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59044884359741	1.40264952818025
Merged-chr5-125158330-1	1.41158508017035	-0.789230104240794	1.62147636128177	-0.48673549802287	0.626445785657203	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0.306240821987646
Merged-chr18-35573549-1	2.56197030718878	0	1.39450513503922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86141864-1	2.68376680529789	2.71804873164169	1.13898288066053	2.38638242750884	0.0170150470093488	0.165112156500283	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	2.22017310661124
Merged-chr17-10315074-1	2.04280798506269	0	1.35934014818216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87248622-1	1.71570988042833	0	1.42989396700773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40986332-2	8.26906261835035	1.43884894549804	0.692875014478258	2.0766356347566	0.0378352013564701	0.303470915951458	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20071055075273	2.9298561631795
Merged-chr17-17617545-1	5.832850721379	2.13614564663075	0.616763566370389	3.46347573544563	0.000533244686539904	0.0115573490171265	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85986259384034	3.75032554325982
Merged-chr3-106552700-1	2.50482481306872	0	1.41555914994688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80109803-1	4.54138096765211	0	1.36980980639552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82876891-1	2.87700645693309	-2.81914383141044	1.17831735351452	-2.39251660259598	0.016733271010068	0.163080138318256	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65003482138855	0.469435083901436
Merged-chr1-105962723-1	4.31257763851438	-0.629822567986504	1.0020302509056	-0.628546460964918	0.529646020562631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18662387858727	1.96943141097616
Merged-chr4-139692251-1	2.6775657418312	-0.58813198444264	2.01203998249926	-0.292306310788163	0.770052434112448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789210977348248	0.735627456805112
Merged-chr16-11824257-1	2.677362556742	0	1.34976574891314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121550364-1	1.90024086523866	0	1.50189666062937	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50200879-1	1.35881244927846	0	1.80867917509323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65776791-1	2.55656674157148	3.81023403037512	1.25686216791178	3.03154484847424	0.00243305773082624	0.0377380941083721	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.43116362910629
Merged-chr3-105775844-1	2.38465704676806	0	1.60251212070228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130372249-1	2.38588573065153	0	1.37485301254968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124709491-2	3.95148356010267	0	1.30412237031798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20954189-2	3.40738314649871	-3.90064159136608	1.23152100876504	-3.16733662162824	0.0015384212654546	0.0264556827921689	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24992448450133	0
Merged-chr15-58595663-1	1.50083598871298	0	1.39291053912041	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129499238-1	3.69397058758126	-0.974944186980956	0.993803903972445	-0.981022697821871	0.32658154857989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89015407814294	1.69017997474274
Merged-chr5-140587930-1	1.83031410408887	0	1.47743159280225	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31449105-1	2.4421316275999	0	1.37706773565845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91045013-1	1.75504911186557	0	1.52336418372033	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58524254-1	1.74449147289869	0	1.39334528708655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62332179-1	1.79644984977732	0	1.49167905359683	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74273828-1	1.50801070685788	0	1.48218953495651	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56689096-1	1.63297480645615	0	1.52060853933705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159840164-1	2.63809679820576	-0.635700353788725	1.02979633495698	-0.617306871475011	0.537032335327831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35982245551704	1.38195934385413
Merged-chr15-5009787-1	1.15277979981598	0	1.52119373221868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-22276809-1	1.92450637362331	4.67364227083111	2.44114656963166	1.91452751300235	0.0555527871313815	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.2288065888411
Merged-chr2-5609627-1	3.70186134303446	-3.43984847715485	1.17468947366229	-2.92830450453477	0.00340816083252152	0.0488291334711579	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07137631966702	0
Merged-chr5-27652576-1	2.54178209278083	3.89972222000024	1.84139172957097	2.11781239014734	0.0341909595901405	0.282360669200877	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.25121929154759
Merged-chr3-121618788-2	3.59586597132614	0	1.34732114902507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-141477005-1	3.8069326613272	0	1.34812777548046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85494967-1	1.18125053178451	0	1.51817293275063	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74992152-1	2.56222701911881	-1.21996667189454	1.09324980529507	-1.11590842823454	0.264461333743209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68935847023674	1.21444166002597
Merged-chr15-89404668-1	1.54127186153889	0	1.42943406171036	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130798126-1	2.09063832274006	0	1.38502818093234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23020443-2	3.08169681811967	0	1.39705981825828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145271158-2	9.64547273343451	0.380610443005145	0.699121335104537	0.544412570313327	0.586157597549841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32249452443806	2.95988517553914
Merged-chr5-148535083-1	3.42014919471203	2.96467230369175	1.15949158075996	2.55687264391228	0.0105617878048411	0.115722767588052	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	2.08628700317133
Merged-chr17-88370760-1	4.07609204562296	-3.9318042888375	1.10009422329453	-3.57406138999861	0.000351486463777799	0.00842252822223104	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88481421036677	0
Merged-chr5-148594877-2	5.04974071815454	0.481611150736714	0.613654430268424	0.784824694455556	0.432556359345332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10420807341947	2.90955925784111
Merged-chr14-21843453-1	3.53360053331665	3.15124958959826	1.08605282089506	2.90156199493243	0.0037130730109858	0.0519448659764244	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.41041824439107
Merged-chr6-91718708-1	1.58435739207945	0	1.40682544990201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30223786-1	3.09287695978202	0.347855453601369	1.36339503241358	0.255139152873082	0.798615624954009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72271444638497	1.67709642602482
Merged-chr1-97650263-2	3.03244739071086	0	1.3525847783118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80749197-1	1.98329297847172	0	1.37743044424344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122259569-3	7.40341447532481	0.949709232334867	0.451773633927341	2.10217941246126	0.0355375625354676	0.290478488968756	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93166238232939	3.95980234072219
Merged-chr5-143066662-2	3.01536613985577	0	1.36328352090976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67582129-2	6.66819583719444	-2.02111968395928	0.758669156487309	-2.66403301976478	0.00772099834938296	0.0904187021754084	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9598573029078	1.87822650685341
Merged-chr17-88255880-3	5.06018555964972	0	1.29760622729438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88524195-2	5.26043926245561	0.789704541700125	0.736140463658092	1.0727633932468	0.283377289208854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30683609924059	2.80796006221898
Merged-chr5-127624720-3	10.1759651212879	0.656538098609921	0.486035553437273	1.35080261920521	0.176758668854666	0.931895215904099	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.74822176134314	4.17344440436088
Merged-chr6-83634809-2	3.90982749838028	0	1.32760034789912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26616933-2	3.67056647676977	0	1.3507943946621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104792196-2	2.90032635922372	0	1.32861126058873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62764198-2	9.76906368719048	1.92116856734262	0.642005337637706	2.99244952450343	0.00276748427255388	0.0417241053343256	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89180392126435	4.03087501846391
Merged-chr7-141070247-2	3.70084816165496	0	1.34486801772525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11253703-3	4.36611185119987	0	1.3083956610643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28702196-2	3.06854295413268	0	1.3243996113599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107313916-2	5.48871077454482	-1.96931032278573	0.806149545112771	-2.44285980774231	0.0145713964115108	0.146512151085796	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35420625131513	1.34591112769102
Merged-chr2-90539136-1	4.69908488015566	-0.320400139205517	0.962793692622115	-0.332781718098844	0.739299059296672	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44043987813593	1.63767395945907
Merged-chr16-57538243-1	4.53989939012832	3.35431920715033	0.901710516733631	3.71995129800755	0.000199261197809593	0.00545264750086503	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641446327055861	3.05750724623645
Merged-chr15-58244320-3	3.32767721561116	0	1.30727257168429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108733755-2	2.62074750532449	0	1.38574282154751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81243263-2	3.21868195816546	0	1.3366158291079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26464624-1	8.80816217429998	2.59606928445195	0.689332313747076	3.7660635265163	0.00016584161211357	0.00472410025508865	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23172330808469	3.45382264509587
Merged-chr10-93700460-1	3.23020097215347	-1.6483082472727	1.11624132523881	-1.47665940151433	0.139766960032368	0.788433336522371	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37069920624173	1.03956264035389
Merged-chr14-16302900-2	4.75746734924002	-0.881855227073769	0.818605386404991	-1.07726536096537	0.281361732589172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87831152795158	1.58756080918295
Merged-chr4-132786231-1	2.19487391614591	0	1.39286697254957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105880460-1	2.41726456751685	0	1.34656433121644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66311423-1	2.33134009734763	0	1.35671098326653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84409423-2	3.90167028804538	0	1.31131470864471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56776245-1	3.65269775846338	0	1.34514913916619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-88197029-2	5.68924806917955	2.48341467548824	1.41790006968095	1.75147369591925	0.0798643483792607	0.524398684605222	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	2.71352082728824
Merged-chr7-80787476-1	5.60030717844363	1.40519357454298	0.976961452625406	1.43833062273519	0.150340267085575	0.830161829725702	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974321679128649	1.46894927517136
Merged-chr3-137922427-1	5.62264522245499	-0.17820836361033	0.826398706832587	-0.2156445334884	0.829264839697859	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60824283665247	1.69442907999601
Merged-chr4-74222540-2	2.96773039449233	0	1.34090630051849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139764407-2	5.44508572894236	0.817855791911674	0.824967187660589	0.991379783517111	0.321500168088192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50947793706143	3.14074246228021
Merged-chr12-71320984-1	3.12940228036486	0.0589094059690182	1.12784047251837	0.0522320376014515	0.958343805451895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61347627080849	2.50201473284981
Merged-chr5-64811759-2	5.26154629306516	0	1.30037895428325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153710896-2	3.28371263984654	0	1.31446905760822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27497847-2	3.39335718094021	0	1.35581624083545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-138274760-1	1.6521879070973	0	1.49250102647906	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102636723-2	4.4755436391564	2.00087069586949	1.00679897970212	1.98735868451265	0.0468826626965794	0.353927273171289	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.73775798795819
Merged-chr10-42697197-2	3.43740055917411	0	1.31060759793196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8070267-2	5.68953018010414	0.941815360057466	0.823371968934005	1.14385161942883	0.252685178140819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03576903979052	1.77128661274154
Merged-chr2-128179946-2	7.47660735813101	0.220307620965511	0.512674682607502	0.429722060478995	0.667397834038251	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15422346396142	3.33322067991586
Merged-chr12-80154169-3	3.64682272212284	0	1.32605306419076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102808443-3	7.0461645198293	1.4020273771569	0.608009705776817	2.30592927026652	0.021114584795923	0.195321865525819	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11454204593236	3.46883776663038
Merged-chr9-48266807-1	6.37571197782673	-1.18545486176574	0.719776542977228	-1.64697623635012	0.0995629304016887	0.618621208522273	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87975311587451	1.72583980988184
Merged-chr7-98671670-3	3.89053018017667	0	1.32801284457072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97408399-4	7.25830810177876	0.915755302742696	0.517325944548161	1.770170841794	0.0766986851137754	0.509448290043176	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61713946521305	3.51409663842588
Merged-chr4-6248029-2	3.90577068184207	0	1.37021642889462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71308829-4	8.63747713506408	0.480352786327265	0.602328875158807	0.797492542924524	0.425165031995958	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17998161015435	3.29376108772029
Merged-chr13-98867466-2	4.09924713188422	0	1.30905240729426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-61157716-3	3.48030188276184	0	1.33929523402644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53386368-1	2.8652485211717	-1.62829214594993	0.935783656975917	-1.740030544252	0.0818536547695245	0.533866546019498	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27377262320309	1.41695929335733
Merged-chr10-14082538-3	3.58586559144723	0	1.31941321687938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32170921-1	3.54992636757775	1.06950548269462	1.09888711876716	0.97326237101996	0.330422919120815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.928670148753437	0.95685815637649
Merged-chr3-96098350-3	3.73863197597265	0	1.32460181088567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90572272-2	3.57110073470035	0	1.35282246503742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95693830-2	2.3683650087238	0	1.36522752218419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49420660-2	3.69492960939084	0	1.32208638313145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101905923-2	7.01697998160801	-0.389300043707835	0.582573647577436	-0.668241767073903	0.503979278312057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17072136902402	2.16743567880231
Merged-chr3-109008382-3	7.74844408069234	1.24634094398478	0.840037733302984	1.48367257156917	0.137895806258787	0.781250160897062	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33008381161066	3.07503266439455
Merged-chr14-27230897-3	4.03563111139085	0	1.33654910325088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91682971-3	3.65105861363814	0	1.3481427197716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36751769-2	3.41756735717366	0	1.33567304343717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146560609-2	4.03913110972128	-1.38824299686259	0.907691443974281	-1.52942170610779	0.126159934794696	0.735091136789497	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02223360026076	1.58656857412163
Merged-chr10-120872586-2	2.56253595465218	0.071535629557714	1.09792985360274	0.0651550090590736	0.948050582540302	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785754803793435	0.683637474991079
Merged-chr13-116957826-3	4.96422446945208	0	1.32517524571024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36402064-3	3.83608224693276	0	1.34250890894515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51384199-2	4.49137533771929	0	1.3022594941372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66568021-2	6.81944262733716	0.523800700917258	0.666149383417949	0.786311169770489	0.431685210231826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45959370609317	2.73301515794639
Merged-chr2-91975865-2	4.75483145640305	3.120176237339	1.11898674328328	2.78839428265605	0.00529700325185511	0.0681239863207487	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15307255889252
Merged-chr1-131482455-1	2.73480633423658	0	1.36692237606744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67446961-1	0.896176546724158	0	1.66186298501713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125183673-1	1.73050531547978	-1.81578568060178	1.23501513822353	-1.4702537842683	0.141493032856215	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16195789770646	0.420961122473315
Merged-chr16-25053678-1	1.35342327636104	0	1.45583952037541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83030034-1	4.86365545513607	0.37073008803216	0.702660627100501	0.527609024518653	0.597770728059613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87619204056119	3.33614760192983
Merged-chr2-104750768-1	2.55972617527404	0	1.37121981831532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50582860-2	3.88353286221925	-2.58004186980709	0.934606519017891	-2.76056481236431	0.00577015076437816	0.07255267882414	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26077619695973	0.986577844696341
Merged-chr8-125275965-1	1.76556796977879	-2.58127068552706	1.2701826126723	-2.03220439311195	0.0421329683537414	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77449299424599	0.563523181795778
Merged-chr7-106589279-1	3.23713943813853	0.715705615016564	1.07542642676942	0.665508673770033	0.505725197619729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51670747952193	2.97692878556689
Merged-chr10-127658322-1	2.19727761356282	0	1.43701775861338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32570635-1	1.96239383631637	0	1.62292325207522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30917364-2	3.20657272770021	0	1.34776711511579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114581566-1	2.32054039336019	0	1.41337427000646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57449713-1	2.46523913548565	0	1.63191967383897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102990051-1	1.97288958869588	0	1.37544330650079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120828436-1	2.52744850510077	0	1.37881604150817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97470986-1	2.38804513261196	1.33772787151287	1.34226334554029	0.996621025194134	0.318948496515135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.469435083901436
Merged-chr2-18773237-1	2.65430759324718	0	1.40823557225256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157535633-1	2.40968064906431	-3.93920698777029	1.17136722232787	-3.36291379226221	0.000771244442109876	0.0154926957621002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62381760393509	0
Merged-chr18-65007822-1	2.8330836339409	-0.625909095418204	1.28346604458905	-0.487670942333823	0.62578293696585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.782001200233288	0.420961122473315
Merged-chr9-118718562-1	2.22765472039697	0	1.38690701904247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65435300-1	1.04771990103086	0.189441442207065	1.50665041081332	0.12573682710165	0.899940249383774	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.382164212378408
Merged-chr14-121369345-1	5.26666702577961	1.28698312162846	0.86783079923919	1.48298853043328	0.138077458112778	0.78207589302571	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48167038804099	3.09829368205001
Merged-chr5-74809592-2	4.35395993129938	0.790362148924557	0.786461491952387	1.00495975583304	0.314916228694723	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85111269525397	3.34779426498257
Merged-chr10-94476290-1	1.99689364507553	0	1.41149190372905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-126468025-1	1.91433401555831	0	1.42058162151962	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63389499-2	4.3652993789105	0	1.32166242633603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69489210-1	3.86078407442179	0.0375543288396245	1.1179801549344	0.0335912302860404	0.973203115541252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0249853210817	1.89892873258735
Merged-chr19-12456275-1	3.04375595443734	3.89215600054425	1.93769733372182	2.00865012961978	0.0445742510046951	0.341871949078968	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	2.38434908732392
Merged-chr7-145049831-1	3.63814672598947	-1.36293408246577	0.979527858357184	-1.39141941787304	0.164098279718658	0.882655974371974	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98118818215092	0.773587911294612
Merged-chr10-17406660-1	3.55588808225891	3.56825287115681	0.998274632249876	3.57442006025417	0.000351005029817809	0.00842025502146642	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	3.27617804945878
Merged-chr16-35628325-2	9.22112549581734	0.637604137414973	0.671883152767953	0.948980689258599	0.342630433626229	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68000069086597	3.54612896583981
Merged-chr6-122593087-1	2.29225777667771	0	1.38380740861365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5596702-2	3.30288278822787	0	1.33891802441152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55486922-1	4.78050984173685	0.905657355220781	0.946949070146834	0.956394999237234	0.338872710264139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95784978219816	2.31199215555684
Merged-chr10-121266426-1	1.99801613199954	0	1.38499891757067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44655882-2	6.41249547651702	-0.84380745127115	0.737079632256661	-1.14479822036016	0.252292752723691	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16384302630381	2.54911206455162
Merged-chr2-132131469-1	1.6271835502588	0	1.41421544061412	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55970019-1	2.88273500883913	0	1.34234811454959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36983252-1	2.54305659291989	-2.93526836015225	1.84199993416594	-1.59352251089051	0.111043022463169	0.671312549345754	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77312563563958	0
Merged-chr6-83661177-1	3.0767591838776	-1.0288084735413	0.871265029720025	-1.18082149340011	0.237673643775367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20507567186425	2.03169262342392
Merged-chr8-31418605-1	2.03900097115256	3.41120033707265	1.50036682935451	2.27357754805884	0.0229913986552106	0.208989141075705	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.01927470790114
Merged-chrX-159968776-1	2.13069294429605	0	1.40830697523161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80827862-1	2.38662314042115	0	1.35890732508339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48436453-2	3.86380715622191	-1.02385257314841	1.06685820211211	-0.959689461187477	0.337211528899677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87055229731375	1.15868211970568
Merged-chr13-47152549-3	3.51553741324841	0	1.33010659000133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125432614-2	2.43013055097058	0	1.36523447303437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141473024-1	1.43855016729424	0	1.65115220949252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39170359-1	2.27902879639602	0	1.36858250435114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9171312-1	1.76505362295284	0	1.4164436867252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-70611217-1	2.05762728631409	0	1.37871338437264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137959675-2	5.54331707592333	-0.400151588480208	0.749419849749776	-0.533948478431435	0.59337718035371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80961288132788	2.87904398499205
Merged-chr2-153263237-3	4.32704269896557	0	1.326912156932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82201973-1	4.69288155857918	-3.57499559641635	0.90460807489339	-3.95198284830441	7.75062970233725e-05	0.00259065293365181	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.14367873544714	0.581381506691384
Merged-chr5-43846526-3	9.70913322858329	0.428184094870952	0.719262838132369	0.595309631153433	0.551636519212987	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79911473001159	3.46414961250053
Merged-chr11-5061931-2	3.51946235994788	0	1.36450402273942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11547813-2	3.85959069919361	0	1.3123654568808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80294117-2	2.46781147449094	0	1.39868152781864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19575481-1	2.20211951274741	0	1.33453295597553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105458017-1	3.96948296158359	-2.14196554264561	1.01624992066776	-2.10771533565105	0.0350556199801985	0.287384837940791	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4732109755306	0.683637474991079
Merged-chr3-100765546-3	2.88068213890344	0	1.38549964138671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37786904-1	2.76808032744829	0	1.37299726717948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-16538407-1	1.58622677171341	0	1.40163024781861	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115778635-2	3.29855810044644	0	1.34689654009404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133203560-2	7.60894177289268	1.92822091751357	0.629416577957821	3.06350513322956	0.00218760451873113	0.0347137457214678	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68342365641612	3.77070890639906
Merged-chr9-72458429-5	7.64038016195938	-0.761947945601636	0.624506184056186	-1.22008070545076	0.222434282069796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87910869648292	2.30999519426894
Merged-chr14-50897660-6	12.7779209474314	-0.19437955756451	0.488910755354657	-0.39757676720265	0.690942188876746	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72516495147233	3.32952036599259
Merged-chr1-105996226-3	5.45496677649707	0	1.31387683934799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29828987-3	3.79468804693612	0	1.31930950350916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170613417-3	3.97434217251677	0	1.31731015088753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92457847-3	3.92124800160816	0	1.30549214586199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37851699-1	3.77454542926186	1.56974569724411	0.786677972507097	1.99541076794285	0.0459980974804086	0.348699730621204	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91344211081725	2.81541700028525
Merged-chr4-106301573-2	5.41775944935792	-0.45447772652464	0.96125587811638	-0.472795784006239	0.636358882231201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70018286776842	1.10669213789164
Merged-chr7-19619679-1	2.31599528557947	0	1.3737855855008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55814328-1	5.11208041354209	0	1.44809392089618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-14513766-2	2.29114789099358	0	1.51124303190008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83965360-2	2.40098052702451	0	1.37975262856527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53809077-2	3.47751723852707	0	1.32453864834261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55862917-2	2.52441170237078	0	1.34527091167217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24991230-2	4.19004590449035	-0.0820275002871114	0.919200863141724	-0.0892378407987464	0.928892892717955	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34265240175892	2.18395292683035
Merged-chr5-108031995-3	4.09491380921119	0	1.35482365245468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17273172-1	4.92212888419235	0.749398262871229	1.01410834454174	0.738972583062484	0.459923645844974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84764282770442	1.79257770822194
Merged-chr17-84419851-1	2.40332178160133	0	1.38745242803181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117681577-1	2.63067749005672	0.749993666352652	1.45148197450936	0.516708908222005	0.605359376558099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.306240821987646
Merged-chr1-132130873-1	2.36843849669608	0	1.34371594281288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49436739-1	1.74752289616985	0	1.42893039518679	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125782623-3	4.23258163576713	0	1.34865724615829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118522479-4	7.91815189445671	-1.17917255714223	0.734054232206818	-1.60638343245735	0.108189688793539	0.658142189899705	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62594107113845	1.81518459389541
Merged-chr12-69501862-1	9.10659731260585	-0.732048178234527	0.526521925917774	-1.39034699639242	0.164423533284518	0.883805232048213	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52069944497278	2.46617644938846
Merged-chr2-31460419-3	4.85816400616024	0	1.31579520990744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128895627-4	4.81079383590432	0	1.30213945151832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85608247-2	3.77064529769545	0	1.33109462174977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30499222-1	1.7516498279102	0	1.37721960002552	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20798706-3	8.19004037505047	0.990671445096348	0.677466166819571	1.46231870109049	0.143653896178336	0.803333509440605	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93251770762053	2.41152608579808
Merged-chr11-46799036-3	4.24546375018199	0	1.32976279043879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55474829-1	2.17129746555629	0	1.34603099250996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151001589-1	2.51029169678259	0	1.34035213242901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51328000-3	5.14887765715944	0	1.29806378149195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4346445-2	3.84389018420829	0	1.32441704686162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87363925-4	9.55297090341114	0.261713287564534	0.513160203496173	0.510003086329523	0.610049299564408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44027190708715	3.14168789824199
Merged-chr15-78870013-4	9.41081706394313	1.14348850585374	0.572108676114418	1.99872603509521	0.04563800445427	0.346895549502004	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76544625789438	3.26883462865396
Merged-chr8-34180086-3	4.23453978060927	3.27181755516366	1.08024649709037	3.02876941880975	0.00245552020257392	0.0380323354248388	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.8131505516485
Merged-chr8-111555485-3	5.28171783579787	-1.49097131743326	0.843721444735311	-1.76713692266172	0.077205300288775	0.511824850631053	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90804427829385	1.4217268527323
Merged-chr9-114925624-5	12.8979777039588	0.443292969284574	0.523559029656461	0.846691479230996	0.397167109319583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38660057956553	3.63068143299972
Merged-chr12-39140588-1	1.51258891669813	0	1.60186447118237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25141106-3	6.62290309451431	0.00751397962732459	0.752015820943583	0.00999178397323677	0.992027842484148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30229706079139	2.48868985467357
Merged-chr13-91451924-1	2.25356285858105	0	1.39522073868945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127527712-1	3.26017689077736	0	1.36317830405452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43953244-2	2.27054052414594	0	1.41423789449743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44527730-1	2.55772153511614	0	1.33948117115406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95648083-2	3.06179525703287	0	1.31859390123371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-94901838-2	6.30533269821602	-0.130249068470806	0.673479636741377	-0.193397188816301	0.846647916876807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87300764498398	1.92027594280124
Merged-chrX-99199693-1	2.36347575667558	0	1.40554133898903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171657336-1	3.0873750831477	-0.551108237201372	1.39435406417954	-0.395242680004417	0.692663797353447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	0.563523181795778
Merged-chr11-96969232-1	2.29785792120592	0	1.37856680340646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64103830-1	2.02679961634876	0	1.42722651137818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149219329-1	1.17213670352954	0	1.45269394407264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34368217-1	1.94248648743733	-0.996999149066224	1.32001028660802	-0.755296499717568	0.450071098429833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58035359804623	0.581381506691384
Merged-chr7-130012267-1	1.65455532681633	0	1.42613784497962	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125684075-1	1.82324282938536	0	1.57626155819903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27667645-1	3.35601552396605	0	1.33601492352774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133591389-1	2.29261662763857	2.73158061607907	1.29120202638634	2.11553309262059	0.03438453753087	0.283483723125439	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	2.4150019944704
Merged-chr3-84693036-1	1.41396469214561	0	1.50671541098558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116448860-1	1.94014933781838	0	1.37886984267457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133307534-2	6.87061345022105	-0.165006719878275	0.651619816457736	-0.253225447892709	0.800094002638046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25077491682294	2.48698724575144
Merged-chr1-132157529-2	2.47950866502957	0	1.37371732721586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44247172-1	2.01501303235236	0	1.36085259931457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132707921-1	2.2391935484247	0	1.38511691940341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57746882-1	1.01780827798686	0	1.76617386389864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82744705-1	2.26377702796721	0	1.34428170345873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140166423-1	4.62002763597491	2.11089396841119	1.04477282281413	2.02043345913749	0.0433384457323801	0.334988653279881	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6150282893163	4.11803093432882
Merged-chr4-81744670-1	2.6608889864917	3.12176052869553	1.15277969134076	2.70802873449714	0.00676841619894039	0.0820573144593616	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.19380919831911
Merged-chr5-143059507-2	3.21566269454315	0	1.32934568275229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-65131845-1	2.2621219189369	0.468600095528689	1.946704651799	0.240714530114079	0.809776376656118	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.892489746801999
Merged-chr10-127744746-2	4.96584539216923	0	1.31262479822783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144522889-1	1.80774928879256	0	1.44176129413147	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122903961-1	2.3013924427745	0	1.41452661050898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60601861-1	2.83804357365331	0	1.3604456911606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-85592883-2	2.66820463281752	0	1.33286522326404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57914788-1	1.25548254610371	0	1.68495885820332	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137313716-1	3.04436963279771	1.0160417461671	0.90527128034228	1.1223616259901	0.261708713524176	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04753202573305	2.45916162824808
Merged-chr5-129063558-1	1.58159499062277	0	1.42484315565047	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95670666-2	2.94990975888512	0	1.34996185411376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141363320-1	2.96493446488617	0	1.34813420545653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53881179-1	1.91686337591681	0	1.38582971497738	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126958430-1	1.60492883785633	0	1.59152236699043	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-18556864-1	3.54378350606178	4.24649420661858	1.18389427204978	3.58688635199344	0.000334650087733518	0.00815059434701247	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	3.39033320492822
Merged-chr12-36051741-1	1.08470921279963	0	1.47337076472166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62560700-1	2.31284402559094	0	1.38525045818707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-16221381-1	2.44130223993869	0	1.38311572799155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184771200-1	0.853113835927962	0	1.56246477993601	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8838247-1	1.72055181797003	0	1.46159630073434	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71723173-1	2.0296901442652	0	1.38043184251649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89079969-1	2.19370052741791	0	1.45744704971717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29820665-1	1.3602524942083	0	1.58790491443279	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174344856-1	1.68257142102544	0	1.51658164046918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32464856-1	3.02457747159906	0	1.35907299387039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141016200-2	4.24496853375388	0	1.30302240966771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11195228-1	1.04470454667679	0	1.78486222845636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69949180-3	6.33358273372614	-1.2962847666542	0.663950698781666	-1.95238105635381	0.0508929804274831	0.375809299961427	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17126295818862	1.78481374055866
Merged-chr8-124349886-5	10.9408009435233	3.08715375870202	0.610458615354757	5.05710572518987	4.25667276562286e-07	4.10260381330961e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51391391094517	4.36494601512464
Merged-chr16-93938699-5	9.27612604962413	0.216452499159063	0.498853348317777	0.43390006279196	0.664361014157828	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1596832215498	3.2168041384613
Merged-chr8-94950257-3	4.01505985827266	0	1.34695110136578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16264118-2	9.42627186602223	-1.31141760974877	0.830086305455971	-1.57985693912684	0.114139632491823	0.684357121974577	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67500351508978	1.77802408088656
Merged-chr5-102027326-3	10.883044497078	0.0993879295867224	0.597658583479545	0.166295494340749	0.8679244116747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47124669577512	3.58248076098488
Merged-chr8-14931568-1	3.09775848619439	0	1.31413754770037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42487033-3	3.34759587162087	0	1.34506436201902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116338562-1	2.10126802964161	0	1.3332802763416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86329441-1	3.73345154153807	-0.345870620727182	1.1992089716893	-0.288415638051776	0.773028598653277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00967833035899	0.581381506691384
Merged-chr19-23057486-1	4.14327992511341	2.84847150401277	1.18348606368659	2.40684837060074	0.0160908491158685	0.158139964855699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chrY-90738965-2	3.49396468936201	0	1.34032528743799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44219262-2	2.70215900364938	0	1.3257493416322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-15974876-2	2.85575035813773	0	1.35484010832646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119436036-1	1.97355250795258	0	1.4054424011394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53628101-2	3.78974857343386	0	1.31212409953645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64512837-2	6.64490777692867	0.763193288340725	0.589999607380227	1.29354880714163	0.195821314984392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01006240982148	3.60182586066279
Merged-chr5-117419070-2	3.24904039774474	-1.78284993159893	1.00122999987283	-1.78065972036931	0.074968057171744	0.500854990690603	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23628421217371	0.73596151290311
Merged-chr17-35215219-2	2.67120891936226	0	1.37237040281067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43209819-2	4.58616034831912	0.168177720896905	0.857605365888004	0.196101525930597	0.844530701929445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4857537950666	2.60033597541029
Merged-chr1-162773815-2	3.47482914057025	-2.69162460803466	1.10300176216741	-2.44027226461143	0.014676196203105	0.147316546403702	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79607250433676	0.61242769162773
Merged-chr11-61751816-1	2.87595311688883	0	1.3396899827251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59526901-2	2.054959164385	0	1.53182585711168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99340632-1	3.39651608606816	0	1.32321404991903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7059143-1	1.93476049301797	-3.21706335075153	1.28870959704942	-2.49634468317548	0.0125480606392164	0.131615661401322	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42523894564238	0.306240821987646
Merged-chr17-7863942-1	2.55976783573869	0	1.35792605088484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58535976-1	2.40999038450602	0	1.49872113145288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71263818-2	6.49468075006953	1.32473866351663	0.828084199453884	1.59976324193879	0.109651116151572	0.665174696995976	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87191651948933	3.98612241891333
Merged-chr16-28593333-1	2.13096131330968	0	1.37715031400768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12483803-1	1.97344189234269	0	1.39808593952979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52062110-2	3.16969102080788	0	1.33054947372442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111469686-3	3.65244790409984	0	1.30832269361733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29432814-1	4.23373754967128	0.247153020652815	1.03875632723444	0.237931663252372	0.811934096879996	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.828298655478171	0.989878296978726
Merged-chr6-99300473-2	2.53230203735116	0	1.41803272054762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8868290-2	2.74209223943241	0	1.34596323656066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65882975-2	2.40695577104374	0	1.36312268529415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37057831-1	4.95080049862852	1.85058631165157	1.00300201599565	1.84504744969485	0.0650306365343795	0.44991974324781	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	1.31470332505763
Merged-chr13-69524623-1	4.2581382392534	-0.508692122824726	0.920997994004164	-0.552327069262244	0.580724287792799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19338664909222	1.92027594280124
Merged-chr4-136016046-1	3.02965846083049	-0.981260071813169	1.12056207649145	-0.875685597789953	0.381200976993763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24353116897845	0.469435083901436
Merged-chr2-167605392-3	3.40912262813444	0	1.33075620016856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131238644-1	2.54510001507844	0	1.33339025201465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155949383-1	6.60639508983834	1.70645285383819	0.775694740018069	2.19990257223923	0.0278138081881375	0.241788094966347	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38644416662568	2.3878400012132
Merged-chr15-84916775-3	3.62090634348239	0	1.34262137577701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111997497-3	6.94117591633433	-2.71371832166452	0.880527963746932	-3.08192179396185	0.00205668864465295	0.0330781137517824	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33340849004869	0.892489746801999
Merged-chr2-145810855-2	2.93577742920237	0	1.32323507615213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107120211-2	5.52357578332944	0	1.31368286430493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13913901-3	3.7049780043379	0	1.32524904859662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9885950-1	4.4160103905571	-1.5813457248418	0.932384007185092	-1.69602407662048	0.0898813205238008	0.572008645398158	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04835725079485	0.73596151290311
Merged-chr2-32834666-3	3.98985310979468	0	1.32578417421244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32962960-2	2.69451081564287	0	1.3825266352618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24923645-2	3.46864610407751	0	1.33507843056422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62426741-2	3.56551258098268	0	1.32899456162862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19108410-2	6.87090886012662	-0.963402602595059	0.594923491601633	-1.61937226583778	0.105367190411927	0.645963451042105	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52531974457052	2.30219722357347
Merged-chr11-107512088-2	3.47512556967657	1.29408067495618	1.33122338393022	0.972098815704107	0.331001391268778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chrX-140493834-1	1.65688210965999	0	1.41583645595691	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-43363026-1	1.37548354474991	0	1.45635185278272	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69413412-1	2.34425936346	-2.33274560729462	1.32848659644949	-1.75594214765065	0.0790982873069643	0.521061481520508	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71456171482721	0.73596151290311
Merged-chrX-103566606-1	2.35537284304206	0	1.40944061976373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43578738-1	1.63085858702265	0	1.40034178394713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5178815-2	4.34813959580224	0	1.36122350442766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-23813716-1	2.29549535989082	3.68774222425317	1.49216344325636	2.47140636028811	0.0134582792197697	0.138495230534657	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.48698724575144
Merged-chr16-55802649-1	1.87102771853527	0	1.36354627973601	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116427655-1	4.28255503666113	1.9943272096825	0.912067553273746	2.18660032639482	0.0287717135067626	0.248061277811408	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.848621293923477	2.43080472771627
Merged-chr1-36086795-1	2.28421380853963	0	1.34953677886815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109098484-1	1.66197272077672	2.31486186249304	1.45238164368458	1.59383855652459	0.110972199276188	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.890396206374751
Merged-chr6-143221296-1	2.55340077300406	0	1.35665620692509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127349278-1	3.98556867463255	-0.969575758162679	0.947897363759577	-1.0228699806877	0.306369324691845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89655948710081	0.773587911294612
Merged-chr8-36820722-3	7.49655898684223	0.344256143541121	0.830168802040901	0.414682101633783	0.678374636577494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54142316886035	2.56805956097596
Merged-chr2-103063099-1	2.18992686362755	0	1.36237705320215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24361122-1	2.14873349581286	0	1.34132896385432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3921734-3	3.14488979236097	0	1.33045377551882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38207971-1	2.11743581831742	0	1.39975676071605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113148545-1	5.48886653594229	0.801922951878867	0.71722776124021	1.11808688287833	0.263529888094237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38485248639551	3.39292586342759
Merged-chr4-35059067-1	1.13991430626315	0	1.87007599860739	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3664659-1	2.09588734301322	0.817539828549997	1.07798468667468	0.758396514028325	0.448213644144085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04790655584953	1.29915063860089
Merged-chr5-140752820-1	1.57461151204204	0	1.50199316053975	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32762065-1	3.82421341290313	-0.599405739510482	0.872372303573535	-0.68709854388443	0.492020631760817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00715007790544	1.23021119707292
Merged-chr13-45915174-1	1.46321466033382	0	1.47276590723925	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12943686-1	1.86390876416734	0	1.38181376872905	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59627132-1	1.81117065684264	0.097096915172999	1.41913656366875	0.0684197121396016	0.945451530579813	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr12-38622111-1	1.58044205806431	0	1.56216810999441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93552349-1	1.86060388444547	0	1.37314289510264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106535608-1	2.11719617642947	0	1.34964775603073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71476222-1	5.67062466008515	2.00694958865364	0.726440828013436	2.76271584864242	0.00573226458966691	0.072201341919116	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58499890165656	3.43795514163182
Merged-chr11-98942950-1	2.63680350348443	0	1.36584248680534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95667802-1	1.78533696532482	0	1.47126457691298	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31062699-2	4.73202563782307	0	1.34945503473591	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82689631-1	2.3541708922812	-0.940942429185689	1.04822311009061	-0.897654726486953	0.369369653048119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43355630191986	1.40000983364339
Merged-chr8-126915225-1	1.07781812556879	0	1.56282326295832	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91884347-2	2.57490182616233	0	1.38977497022827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159677525-4	5.73332110652278	0	1.3522190378431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-114140901-2	1.66422590786244	0	1.58194314530455	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36837308-2	4.51729932220953	1.57975201902095	1.18566715664393	1.3323739383087	0.182737341670186	0.954681350238243	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	1.19380919831911
Merged-chr17-7176660-1	1.61870965510748	0	1.4789849392487	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12085100-1	2.33483783743721	0	1.37636787616621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51427954-2	3.7669552943874	0	1.30853774274594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54038818-2	2.72475706747137	0	1.38807454093674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99386939-1	2.07444804104219	0	1.41463781455511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174487927-1	1.73947636039566	0	1.49073930901365	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91354366-1	6.17477952138572	0	1.31073727340443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86039013-1	2.49590054237477	-1.22955842189218	1.27235978943331	-0.966360641151512	0.333863751581225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0
Merged-chr17-80731642-1	2.13276333088963	0	1.39227138341248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57755418-1	2.05734053095841	0	1.42798673616633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68381962-1	2.03156172714301	0	1.41221256689746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-84538986-1	2.97172641759297	-2.8143452630646	1.41057013346769	-1.99518279615486	0.0460229466892333	0.348807176334335	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86292473022935	0.306240821987646
Merged-chr19-45944507-1	2.40448780293653	0	1.3482579686662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49411276-1	4.23991055104123	-1.87251207775625	0.978200626023162	-1.9142413406224	0.0555893257280908	0.400765675091331	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36860054523832	0.733321818366247
Merged-chr1-133039669-4	9.18525273769417	-0.00315986977526719	0.74387569690345	-0.00424784649965157	0.996610719054081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52985880824122	1.8526469837404
Merged-chr17-78248623-6	6.99806081885019	0	1.30826162781428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165968390-3	8.76995481164636	0.393551441251815	0.457551617721629	0.860124685410354	0.38972031504017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69481351888262	4.05890426605077
Merged-chr10-93998447-2	3.80636887482437	-0.0905722138338932	0.963904048405976	-0.0939639313515426	0.925137808540205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23776475451264	1.7864504728774
Merged-chr2-154215410-2	3.38809554879741	0	1.3327090612523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85844775-2	4.65279218840039	0	1.30716512489732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73069100-4	10.1988912766924	1.26159777056822	0.590243455932314	2.13741932737819	0.0325639008032216	0.27302035692678	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61690693516149	3.9932951841234
Merged-chr15-64031883-3	2.84803880088458	0	1.3851948469681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58462436-3	5.00422537880759	0	1.32148155393924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135487093-2	2.97819300961626	0	1.34727661429813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-89159478-2	3.1302305643178	0	1.34327664651357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64919034-2	4.23937864387193	0	1.33785527252904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53027305-2	2.82551537802327	0	1.45267110364613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181125340-2	2.85741183870312	0	1.33989898880259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97297342-2	3.33476000816876	0	1.34570728585703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71283659-1	3.76063916232762	0	1.32436083870785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120469135-1	6.615978614942	-0.312819372913441	0.757582720769569	-0.412917776946751	0.679666856162784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81962994973652	2.20505907921057
Merged-chr18-15265705-3	4.21949445993704	0	1.36189052009996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102806060-1	2.53407491779047	0	1.39668809690902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116007900-1	3.90498574504601	0	1.32277001791837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32391545-1	4.07274580819367	0	1.32887100827131	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51065555-2	9.33314272207175	-0.227563125159447	0.622808704644707	-0.365382056259578	0.714826233742526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81615791669439	2.40525971832851
Merged-chr2-6096529-2	3.43523473044971	0	1.34831077152703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50063649-2	8.11294764518822	0.273090233327664	0.485731488303905	0.562224685661723	0.573962944435413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30915002247513	3.62344383809729
Merged-chr13-44292594-6	6.82181079188699	0	1.31405801612793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31165155-2	3.19887012923124	0	1.33725413492758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99544703-2	3.76934633274519	0	1.37936543726153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34562677-3	3.89611438036261	0	1.312285108366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99267744-1	2.7205093843265	0	1.33601803779357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134828040-1	2.44517188074278	0	1.36386829593096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119141446-2	4.89833560391371	-1.63767872961471	0.827776870780812	-1.97840600217538	0.0478829231650153	0.359644386577609	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04806872315166	0.843323834477631
Merged-chr5-24918655-1	2.02712798020157	0	1.44305067467455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72902383-1	3.80275215207839	-0.920079668621247	0.797052377905105	-1.15435283066277	0.248355545214073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12922321767448	2.4873962880981
Merged-chr1-33904364-2	2.86423908054001	0	1.33166268252297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80220570-2	3.02508551507549	0.649960579050816	1.01073885188668	0.643054907642637	0.520188472339597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15770559050072	1.84001395625789
Merged-chr13-19830735-1	1.57846998536336	0	1.45277212408456	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40608556-2	3.58495032571411	0.759032253583594	1.40389676866012	0.540661016199939	0.588741253244371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.423054662900563
Merged-chr17-8857162-2	3.22566953431856	0	1.35624313279815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46374595-2	3.62052387376412	0	1.32063611991581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21137416-2	3.42371025176161	0	1.35550881017311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-53804461-2	7.53270123533928	0.885794805495221	0.703764141842009	1.25865293900421	0.208155716640209	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72684327313431	2.74371842151223
Merged-chr1-13297386-2	3.52059758444312	-0.169492264193019	1.07043231138984	-0.158340011217478	0.874188881408471	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4082169826974	1.08186277552917
Merged-chr4-141646808-1	2.35903258224515	0	1.40837058520253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-112042871-1	2.45855964774613	0	1.43761019655437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144605985-2	2.78841447152657	0	1.34072271228151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90547990-1	3.49497722775058	0.314208587981494	0.952608028105494	0.329840373701635	0.741520579142034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09990907556301	1.15307255889252
Merged-chr15-100612084-5	7.99419252454512	-1.7881102507732	0.73175158220079	-2.44360284865438	0.014541424213869	0.146345896608576	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15768058107538	1.38660038197036
Merged-chr16-85143687-3	9.12870766791019	0.843608671473323	0.508506018474275	1.65899446776361	0.0971169070912323	0.606943516716112	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65733543946996	4.460970497391
Merged-chr2-68349739-2	3.38345817844305	0	1.33653296063401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-144907983-2	5.45552156309963	-0.334675465464093	0.634036106626479	-0.527849221781395	0.597603990655273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40194157117576	2.55458865574395
Merged-chr10-40087827-2	3.82256276498236	0	1.3073074163363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117804769-1	4.45310955973138	1.55779925610379	0.904897933312382	1.72151929931087	0.0851566331671746	0.549052328657345	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.970635354461015	2.05066483796074
Merged-chr11-46488380-1	2.72202703027217	0	1.33230503444057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22326186-3	5.77587663392475	0	1.30880169408916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32204928-3	2.99130060085578	0	1.33682236536226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24163419-3	3.39253759881017	0	1.36142569432971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77840636-2	5.38334570205634	-2.88343028248638	1.06801677446239	-2.69979868428361	0.00693814454249245	0.083634014623448	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59650721850341	0.61242769162773
Merged-chr14-77841611-4	8.34480046034036	0.845553374694756	0.833948657675414	1.01391538545273	0.310623129270701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47949646024029	1.52944205045577
Merged-chr2-152692095-4	9.0451768599443	1.79673353504169	0.747656402000152	2.40315408285814	0.0162543370139669	0.159434990470531	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56224302237963	3.43232321664974
Merged-chr5-139750746-4	10.1123475924609	0.970955021432561	0.525679801862141	1.84704646819813	0.0647404058843801	0.448338974451113	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09264896850868	3.93913832257743
Merged-chr3-65952104-3	8.4955635607918	0.421589555352184	0.55267246733701	0.762819898345154	0.445570812412975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74757251144621	3.09500249642226
Merged-chr7-112213091-2	6.09934699490046	-0.549597479676183	0.720795292585394	-0.762487609630263	0.445769035378447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1762090194059	2.4644468692424
Merged-chr12-16864660-2	3.13361312388508	0	1.37462434394332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106138873-2	2.78108937721849	0	1.31854025451637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174434330-2	7.59974849993267	1.16583543282772	0.537862530345077	2.1675342063329	0.0301941443762878	0.257849785469538	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12263577664978	4.37653359823613
Merged-chr1-167269456-2	2.93565793859072	0	1.3573704694386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70914573-2	8.33582811534404	0.0685932837242648	0.509686718885752	0.134579303683289	0.892944505990825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2624861315846	3.4031241794979
Merged-chr3-81063940-2	8.70093750897538	0.274388760168312	0.602680056227465	0.455280969285553	0.648907115603314	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59617666043018	3.97715045765267
Merged-chr11-70872369-3	6.52111336360098	-1.81694266011718	0.650827698440735	-2.79174144626948	0.00524252284913417	0.0676096108347191	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.9100286608964	1.8499596259337
Merged-chr8-84069955-2	4.97108325387837	0.334116020137216	0.735795887039817	0.454087914899062	0.649765551182256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58087958252112	1.94559955552748
Merged-chr8-91059997-1	3.49488705822983	-4.13963853440315	1.13403142932756	-3.65037372628887	0.000261859020605879	0.00670510954565508	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99839372010801	0
Merged-chr5-64651683-1	2.74051017667026	0.102459112085723	1.38767564457223	0.0738350582763941	0.941141630677114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr10-6418346-1	1.43871408237211	0	2.069145900946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128609479-1	2.18709527320222	4.8572538215187	1.51035324243682	3.21597205543914	0.00130003490493296	0.0232977883301486	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.13763127686901
Merged-chr13-45929924-1	6.26897647533693	0.0187950250507696	0.754249219909018	0.0249188524888853	0.980119689791301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7548865666785	2.229184603865
Merged-chr19-40649170-1	5.21334226162948	1.62182683062621	0.839294333777787	1.93236956971475	0.0533139071860141	0.388172766459864	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15349446630114	3.21204401084942
Merged-chr15-73643332-1	1.98753437613308	0	1.44545424021272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-66814364-1	2.03846052353234	0	1.46488191477698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70231973-2	3.26621288213039	0	1.3434577825928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59493695-1	2.25583242716729	0	1.43526949361838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12466881-1	5.33328885858646	0.0945322379019854	0.918981179705176	0.102866348070711	0.918069046327187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.121691942552	1.72942046393685
Merged-chr12-29573969-1	3.75867708121552	2.33932827730151	1.09354010736845	2.13922494615309	0.0324174547715702	0.272001925976249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	1.7953101035406
Merged-chrX-20946210-2	3.78188754258561	0	1.33192897708762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44654394-1	1.78760906948265	0	1.54381041407459	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61430521-1	2.60132933875975	0	1.35992600580218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-37440699-1	2.08229698967163	0	1.3713720458838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-20232622-1	3.75865231729277	0	1.42036369463403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121872471-1	2.42984665201865	0	1.42683505162056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114583983-1	3.84885174507452	-1.07679492861862	0.917951920107214	-1.17304066262299	0.24077949975104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07137631966702	1.04885222765555
Merged-chr1-131005781-1	2.04631246196446	0	1.62419868849546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56133464-2	4.12435980001267	0	1.32175084598427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-175660097-1	1.3519078248571	0.731091657857482	1.51951073654593	0.481136223834364	0.630419684417789	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.382164212378408
Merged-chr12-5305686-1	4.9367233011132	-1.39066245224699	0.735626780127379	-1.89044565779156	0.0586983819323016	0.417332658660448	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20619722629505	1.72320011534497
Merged-chrX-143052795-1	2.36799003239685	0	1.43941333129173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54936715-1	2.76335565742	0	1.39045260712105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43385840-1	3.05120881997912	0	1.36413409220488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94546137-1	1.26555004724298	0	1.64340543555354	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76348540-1	3.8341067410547	0.183009295791422	1.07774185276686	0.169808099519924	0.865161056946092	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05115842818819	1.58492111464609
Merged-chr11-68451566-1	3.00338848351595	0	1.36947806384946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116985759-2	3.12611218649623	-0.831182476416959	1.25521217799738	-0.662184840927106	0.507852768121151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	0.420961122473315
Merged-chr19-46619068-1	3.25706366684204	0	1.39846882911422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106882517-1	3.71002094723361	0.030329795248396	1.00670891693783	0.0301276712047531	0.975965232313699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5262962241683	1.72011176107421
Merged-chr2-132601207-1	2.15890586015845	0	1.37124008113161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47219871-1	4.60380040951128	-2.74787013993015	1.17771546513732	-2.33322073223329	0.0196365632602182	0.184752320175196	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05967111789845	0.306240821987646
Merged-chr7-119861803-1	1.18766431858	0	1.61327393348783	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79663970-1	1.6264445768395	0	1.42807735313717	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101868926-2	6.38501065006414	-0.988135335401528	0.875509156597105	-1.12864077771862	0.259049401360759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85601674921006	1.11548603074465
Merged-chr10-117930066-1	2.88545599143903	0	1.37457126766504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131505076-1	1.55801133765366	0	1.64216098596298	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6212770-1	2.43530526351242	0	1.43347277400179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75853413-1	5.02040187743031	3.8593509691308	1.08540761346377	3.55566970533289	0.000377017489025748	0.00884617049833988	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.11066895928297
Merged-chr3-48415414-1	2.76721516851478	2.11353737886552	1.45810267224826	1.44951203992146	0.14719464046428	0.817628440647642	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.41442007350706
Merged-chr1-118759716-1	4.64836083031406	-2.22120691792746	0.903615049144378	-2.45813404727013	0.0139661033739165	0.142063581798588	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90827856554713	0.733321818366247
Merged-chr1-182375336-1	2.94907259033995	0	1.34117077852032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31370254-1	1.43328846532993	0	1.46199476433799	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101556723-1	2.96984728993646	0.263600497653835	1.33148328979915	0.197975070114172	0.84306456883951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10450937279159	1.03956264035389
Merged-chr17-66854620-1	2.96539688092185	0.286234583724555	1.10601889487458	0.25879719148651	0.795791724944344	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49779547218927	1.43116362910629
Merged-chr15-100131882-1	1.96819833393689	0	1.47094164431401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101072688-1	1.42847493043381	0	1.60321712390574	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105143172-1	2.41385305426442	0	1.45721948113377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59593148-1	2.0500636353493	0	1.43784869260051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56370812-1	2.42389746346931	0	1.40830988371879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33154937-1	1.92460977628903	0	1.40089397197968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148115697-3	3.63531936730011	0	1.31928994444475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64597710-2	4.0895198241879	0	1.30934327082755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102609795-2	6.31881018483939	-0.78839264612978	0.642109429495542	-1.22781664606477	0.219515805404011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94445616855536	2.39939947646286
Merged-chr15-81155413-1	2.56579420425243	0	1.33811897134361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103374258-3	4.54242159023145	1.95082541509816	1.27729497140199	1.52731002530831	0.126683937728216	0.737355357155786	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr17-84094531-1	2.52685255503221	0	1.3328992728867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10834309-1	2.00788587615922	0	1.42489987707492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-99206380-3	3.14303485336229	0	1.35454597161699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89953606-5	11.1770580236622	-0.431155606811725	0.396216548006568	-1.08818172532405	0.276514890641458	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.10075047021219	3.75704489795243
Merged-chr2-156402235-2	5.68905175938755	0.466992847306064	0.887074134239921	0.526441736130882	0.598581323793495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52722148531908	2.82793376242699
Merged-chr3-27281210-2	2.58778028952526	0	1.37228760072169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5989703-2	11.2464382546635	-0.808380242995243	0.581646730861526	-1.38981309462168	0.164585640714595	0.884531069835998	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28272680454072	2.23836617526991
Merged-chr16-84581331-2	7.39634978153918	-1.12935014072624	0.653463382564115	-1.72825313683958	0.0839428508816962	0.543909720745198	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06768807731278	1.45327344926554
Merged-chr13-31179617-1	3.76847928820548	-2.14889798568376	1.06049543557942	-2.02631516703292	0.0427324979837866	0.331367904868838	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43305858799262	0.793480537552656
Merged-chr4-138001947-3	7.80675066880306	1.7747195980669	0.765550387287587	2.31822702664274	0.0204369859330106	0.190455687789292	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40370771130139	2.47843137798393
Merged-chr8-124844696-2	4.91204018116243	-1.12491978233658	0.631136393856079	-1.78237191403845	0.0746886024494206	0.499798656458796	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.81739203576125	2.21353883069526
Merged-chr1-166153560-2	4.48197645637184	0	1.32657874776537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-70805491-3	3.94475375656076	0	1.32347160139373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83006261-1	1.33408667761313	0	1.40703702936863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-9990367-2	2.63978670291961	0	1.34584088435416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44717053-2	2.83774093255851	0	1.37886198084263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100360524-1	4.50331607644416	-1.97690036449648	0.937245466230305	-2.10926639362447	0.034921593865041	0.286645706909304	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56637604333352	0.581381506691384
Merged-chr19-45064084-2	6.27897447531479	1.04830017926895	0.654200802510069	1.60241347189851	0.109064207708081	0.662352204172144	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43563229610567	2.34001935796286
Merged-chr16-91411380-2	2.35095950970202	0	1.42040446503275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99163504-2	6.52928600613877	0.378265084857035	0.879695649330654	0.429995402551838	0.667198985503068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8971646345766	3.31832073710679
Merged-chr1-171843721-2	8.9109173197398	2.36194895764252	0.623764175099723	3.7866056627329	0.000152719171574859	0.00442946603893951	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51534837964061	3.96637134291957
Merged-chr5-21586963-1	2.47103563517775	0	1.35386310191133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24575910-1	2.95376340191818	0	1.32945177353127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32999398-2	5.77446952705817	-1.32205072644873	0.697403662966218	-1.89567505399347	0.0580030259374725	0.414053460652199	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2709740106495	1.88906532169278
Merged-chr17-34251806-3	6.47968006273934	0.533688001386713	0.682310904314191	0.782177154156927	0.434110468833478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46417406077178	2.32431194912896
Merged-chr14-31401522-4	4.49854929209854	0	1.33925007112948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122523450-1	4.87335055115051	0.100724423442071	0.83799670825844	0.120196681501769	0.904327346496687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57596523463956	1.93871841517079
Merged-chr7-101427897-3	4.24658697587986	0	1.31205203843899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46497111-1	2.54291941624131	0	1.35344543158281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53354100-1	3.30218943464746	0	1.35083756927504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6519608-2	3.153112452208	0	1.32040507558522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32057666-2	3.65299530912755	-2.10810906235191	0.863538863622424	-2.44124399162382	0.0146367619961694	0.14701104356005	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10045122675056	1.00443616959195
Merged-chr3-123515823-5	11.9786053387229	0.866733552152019	0.415761076452778	2.08469142793953	0.03709731926393	0.299002311746552	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47324734340792	4.34740322173668
Merged-chr11-32321373-3	3.0189236305255	0	1.34105463773987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120381619-4	4.50518980347703	0	1.32963430957148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141048984-3	3.55647714923503	0	1.30511950535627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118269112-4	7.27105750469831	2.30819261412875	0.812401406542735	2.84119721548923	0.00449445086587518	0.0599470515450251	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862965511447223	3.08775141619277
Merged-chr6-134923768-3	5.81023215249699	-0.442871340897826	0.732489927183849	-0.604610827346802	0.545437610784179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37521594663131	2.035112151504
Merged-chr13-56592122-1	2.71860434017267	0	1.37732757072725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37406699-1	1.46445978741707	0	1.44395556400173	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17240884-1	1.56382212994631	0	1.58936626302782	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184631501-1	1.26920067187123	0	1.4947088433533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14986116-1	1.8492382540049	4.35624436548529	1.30041551589396	3.34988648800505	0.000808446833588385	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.60944671944975
Merged-chr14-120531643-1	2.7794672669906	-2.22764578970266	1.13623667350175	-1.96054734163554	0.0499318502787516	0.370315138839553	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70760585989441	0.420961122473315
Merged-chr7-90135639-1	2.96457022886628	0	1.42833284939172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42831898-1	4.58974863481592	-2.34992314954465	0.901073487564625	-2.60791509457891	0.00910955467129123	0.103206881274423	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26964972070273	0.735627456805112
Merged-chr11-50255040-1	2.4470745633027	0	1.35990453085625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44493076-2	3.27235882726476	0	1.34380368170028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36474519-1	4.19902573427345	-1.54461351160568	1.21416217117615	-1.27216408835191	0.203314824212675	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918643588040654	0
Merged-chr4-3683876-1	3.610454994978	0.0552081369489303	0.918593209476936	0.0601007457701182	0.952075396000037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52922197670976	1.88903407179563
Merged-chr10-70225974-1	1.243627541925	0	1.53537912161437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60746376-1	1.59302302202416	0	1.38218854498916	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46143596-2	3.29150466138091	0	1.33967892776738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97800304-2	8.2117872873028	0.901209413621123	0.689587092144182	1.30688266049025	0.191252565866064	0.986119611705715	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47357776937917	3.28309010882377
Merged-chr6-83651268-1	3.54262483022599	2.87224611378184	1.10818024998897	2.59185824130183	0.00954590970374598	0.107106287002229	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	2.31205403547308
Merged-chr14-60290193-2	2.21938836445122	1.28336688790107	1.35857950701829	0.944638779895709	0.34484332157366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-148488125-1	2.06098067545991	0	1.36961094864586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25484664-1	5.4908066150907	0	1.31275751923712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132602816-3	4.47746416795104	0	1.33838045590859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150048742-3	10.8019679439817	-0.577443698418163	0.476011258823276	-1.21308832031753	0.225096054972897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73160010268415	2.69625503565829
Merged-chr8-120685342-1	1.98964793269183	0	1.41412196556176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85736439-1	2.29742332232114	0	1.38881572378772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7175402-1	2.08547308388572	0	1.53001085797885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40316651-1	2.17382815369379	0	1.39167763019789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143073225-2	3.31626413447937	0	1.32845121455982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135969575-1	2.97511174298069	0.587079978989688	1.48479107252924	0.395395682161288	0.692550895144379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.953107588689112	1.1517642783294
Merged-chr8-92885121-1	2.60809232455975	0.298821221418161	1.48394365443694	0.201369654787563	0.840409541162995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.898035116883015	1.15307255889252
Merged-chr10-36978526-2	3.56310756505208	0	1.33610853316054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23866109-1	1.65728118544554	0	1.55838637207588	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78044837-1	2.73705422471741	0	1.39525657096416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14885320-1	1.71377271629282	0	1.49014956161706	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54706295-1	4.52168487235612	2.425213326635	0.801458991531664	3.02599802642452	0.0024781392033969	0.038319230116615	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63544930519609	3.12575163045538
Merged-chr3-19369203-1	2.77324537299791	-1.80916436659953	1.06875015470288	-1.69278512722413	0.0904963746558407	0.57519004837261	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56624705410649	0.733321818366247
Merged-chr9-45313593-1	1.60041296161523	0	1.38807833720137	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57550647-1	1.80704780841403	0	1.4276640467417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44831396-3	4.11717351603044	0	1.32544845403587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24352948-1	1.95846734153382	0	1.45491440314263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11462085-1	2.80534100656041	0	1.36761101557253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164939482-1	5.08592038236588	-0.778101770803471	0.766469478594615	-1.01517645846797	0.310021720308696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58616690160666	1.72583980988184
Merged-chr11-103248945-1	1.68817563749522	0	1.42767250957362	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30192886-1	2.4524968801456	0	1.41439710472264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-122858096-2	5.5254732484454	-0.498351790633198	0.689563408468699	-0.722706258065345	0.469860369971234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50428712432252	1.92713101668536
Merged-chr6-3456095-1	1.37635028209485	0	1.54485305177155	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41434829-1	2.50476276512003	0.371443761431544	1.22268931674056	0.3037924322605	0.76128603261421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911455188998607	0.735627456805112
Merged-chr17-83397867-2	4.84576061249854	0	1.3234628840049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55621533-1	2.28858837317776	-0.186956594273551	1.28977424607658	-0.14495295966892	0.884748012174306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67351085755745	1.47158896970822
Merged-chr5-102640025-2	2.6253984866089	0	1.34915187167342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17772943-1	4.98444712554221	-2.10942164265281	0.778012956960173	-2.71129371790243	0.00670212285871156	0.0814955192269009	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45842025168936	1.50243936158991
Merged-chr9-116138706-1	2.04220934949241	0	1.3684211319772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118448445-1	1.69131643421597	0	1.46575004325026	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46867008-1	3.49864514500553	1.28434832667155	0.940054475839376	1.36624882885085	0.171860876201349	0.913971018505662	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72421191207704	2.69684040564681
Merged-chr5-74885622-1	1.74989138076641	-1.3788500849082	1.40760841930436	-0.979569364603281	0.327298733315532	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17693648965422	0.73596151290311
Merged-chr5-115544752-1	4.40839199629992	-0.584367567932679	0.840502088367111	-0.695260102289528	0.486892312883551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28135809001969	1.57403368136583
Merged-chr1-87607880-3	4.44911715269733	0	1.3128025715009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-97431634-2	3.42123689668109	0	1.32759929982209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58389535-2	3.79119344434713	0	1.32237604228221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76496421-1	3.3062230186088	0	1.31321607066234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151245416-2	3.69069953689926	0	1.33639273864133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-139874644-2	3.87716685922497	0	1.38092536687805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37224788-1	2.41302297367532	0	1.39673064160362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-89359799-3	3.68796587404413	0	1.32092114116166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141766049-1	6.16105183576054	0.869725430248677	0.570622002604457	1.52417086316167	0.127466034476566	0.740061793772159	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54890208341413	3.69948589012259
Merged-chr11-99150136-3	3.38777945157544	0	1.34268903265717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30025217-2	7.72287666852847	-2.63774135423489	0.880774858140752	-2.99479637713883	0.00274628108145188	0.0414836993870907	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39834107649429	0.733321818366247
Merged-chr2-35539676-1	2.9936763718461	0	1.33910941384007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38209334-1	2.1950980934173	0	1.34254165199679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47570197-2	6.47229737718285	-0.936357975694431	0.687247691045445	-1.36247525876739	0.17304794703731	0.918452822214107	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40279718153553	2.55100800168893
Merged-chr16-20540585-1	2.43811054028278	0	1.354116985367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66980650-2	3.07982738374067	0	1.33335471746096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142894860-1	1.84559703281175	0	1.39509864149846	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25554883-1	2.18805134389489	0	1.33496059827888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51478028-2	3.13042062582253	0	1.35544518221046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66344822-1	2.01659317891045	0	1.41695793967707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95794439-2	2.67726988430722	0	1.34829924930002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46478412-2	2.59826422232436	0	1.34779629152706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113668343-2	3.1771788825102	0	1.32227691041905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34887708-2	3.59067858354379	0	1.52912436170402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119098418-1	1.31653611391749	0	1.45126627539488	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-40430358-1	1.64549761428687	0	1.51452904386799	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-39276618-2	4.8737285528287	-0.283969351821048	1.06852570740393	-0.265758090660236	0.790425521609669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.95334236682741	0.683637474991079
Merged-chr1-172514627-1	6.65175479270565	1.24562695972103	0.779127468816281	1.59874604551358	0.109877041928796	0.66610757727751	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53692062126356	2.26276386882201
Merged-chr12-21322146-1	5.89054936556448	2.16419260059918	0.879543855841489	2.46058520700895	0.013871063020168	0.141406939799672	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66998701897625	4.05887775751644
Merged-chr13-41530853-2	1.85604595174674	0	1.60497429166415	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94239796-3	3.98163062518813	0	1.31213440125233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139042556-1	2.02810544309167	0	1.46151361030445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91167055-3	4.6501009077858	0	1.32078415873143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62726777-2	3.8178511977488	0	1.34133708218146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111269868-2	3.24736845839335	2.49898774787827	1.24514469296899	2.00698582420935	0.0447511724155433	0.34246517304908	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr3-65603792-2	5.84336108739402	-3.22391693905291	0.869989011461267	-3.70569845892408	0.00021080898659337	0.00569943071490705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.88405616177365	0.733321818366247
Merged-chr4-47050401-3	9.42750659806289	0.299860924689435	0.500079943901244	0.599625976499173	0.548755531131086	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32519632258447	3.58892063299716
Merged-chr1-15799845-3	7.59936203622402	-0.375342833771039	0.477042727530994	-0.786811772005585	0.431392061231453	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65678824252383	3.30983433996409
Merged-chr13-45311724-2	6.81845452059987	-1.04060918340716	0.849887694253565	-1.22440787229082	0.220798401064742	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2039771001548	1.7217938484671
Merged-chr7-45471163-2	4.18116227507733	0	1.31018276147281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101859932-3	9.30168113883115	-0.820553278412992	0.53566923773137	-1.53182826381471	0.125564819465609	0.732865192282931	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61340651237617	2.55828325774449
Merged-chr5-129016571-2	6.59092229250819	1.39434367756081	0.589248132550383	2.36630987955077	0.0179663993837006	0.172448932744903	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4628233857151	3.98170123151581
Merged-chr9-105302496-1	4.90931552492057	-0.436185204869545	0.574655614679589	-0.759037576118959	0.447830079112491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.83435913058508	3.33643563524482
Merged-chr12-110706401-2	3.14607214610576	0	1.32077547887373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130074073-2	2.89251306269276	0	1.34724328503325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132823750-1	4.06775906791177	1.4119446263206	0.866646302585968	1.62920515798374	0.10326959542375	0.636687893439036	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07325100146903	2.11539020246932
Merged-chr17-30215838-2	4.96050015379889	0	1.32087675752927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24297022-1	2.34684305594293	0	1.35088989240164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53376931-2	3.39213418713116	0	1.3377713637882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60082594-1	1.76212595712622	0	1.44054612409075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40233430-1	4.01277694074862	0	1.33963739328959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152555578-1	2.21356441360827	0	1.36610291296271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54711123-1	2.04298908673169	0	1.39152290687291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-125426538-1	2.85631805819212	0	1.34991577611441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-24575743-1	1.16179070771098	0	1.57779959818474	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145898684-1	1.38253357387854	0.467530550689331	1.33637236195278	0.349850508735566	0.726450890891257	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12667032622448	0.793480537552656
Merged-chr17-26231620-1	4.9842787583742	-0.585122432949289	0.838947908311596	-0.697447871497603	0.485522551564043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11660986051525	1.29948469469889
Merged-chr13-102722531-2	4.81323682078413	0.0963447157338051	0.664341104983152	0.145022963370976	0.884692741303577	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51649900647321	2.61418801975652
Merged-chr15-78330874-1	2.35037249380115	0	1.40407923931059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117680943-1	4.45615862699428	0.0205150128001185	0.972142827049858	0.0211028793602016	0.9831635880101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17267789052377	1.31734301959449
Merged-chr3-107076798-1	1.09943329561131	0	1.90716786348514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64285758-1	1.79008325395927	0	1.49331257714474	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104290031-5	9.95806473337295	1.49900244161675	0.548886642235648	2.73098728639346	0.00631449075122023	0.0779717899904076	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41758540921093	4.18165601450959
Merged-chr13-60671249-2	6.40472561793803	0.779151253990295	0.818522678963266	0.951899408550489	0.341147999537791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39744255332134	2.08364730863447
Merged-chr10-13443738-1	1.47302455338776	0	1.42761366866162	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5291012-2	2.82978146423175	0	1.3311717212114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10010166-1	4.39621759842265	-0.433042644682754	0.707624587348742	-0.611966645061382	0.540559826094884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33827406343512	2.8452237720862
Merged-chr14-63846053-1	1.32979374431805	0	1.55155528371359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165845173-1	1.80730642109808	0	1.42975267669476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100685828-2	2.71768276536345	1.29060860943143	1.33091748584016	0.969713466959761	0.332189335888927	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr3-115856578-1	2.16568831515991	-1.19188814935023	1.35758069369642	-0.877950132087514	0.379970781686131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0
Merged-chr17-29398775-1	6.09229790735679	2.30679723215982	0.818307429282469	2.81898605537839	0.00481756109748237	0.0632526316005792	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23115662099011	3.56126212538144
Merged-chr16-89986176-1	0.917384324719481	0	1.698977338711	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96365430-1	1.2209167529259	0	1.49975298553685	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84940595-1	2.6316582007062	0	1.33294783625541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37499520-1	3.83816948145371	0.221049979250926	1.32421230242506	0.166929410673887	0.867425591452103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.306240821987646
Merged-chr8-69013972-1	5.53632233992468	0.492396635055188	0.744152129133482	0.661688135769433	0.508171109807152	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87913062785994	2.40790914314352
Merged-chr6-8410249-1	2.27106141100427	0	1.35390193131159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93913570-1	3.22049217031475	3.48190065927615	1.36334147926373	2.55394610391855	0.0106509741727151	0.116446136571899	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.43775750113187
Merged-chr11-118490172-1	1.39734018696254	0	1.50128793684921	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76948364-1	4.09626638092618	1.53581437409251	1.01664585359008	1.51066801548355	0.130873055357917	0.753814955964603	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45326054927621	2.39912876297954
Merged-chr9-52154430-1	1.47716733537816	0	1.6547269097842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-54722589-1	2.55805645432071	0.125734682071703	1.52951170484125	0.0822057665029464	0.934483087962256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.838977036854949	0.666688015277142
Merged-chr8-75101923-1	2.18174676529877	0	1.41286121400584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-50613143-1	2.13777395975045	0	1.36147253252926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-97126182-1	1.43844106195598	0	1.40616017493632	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69795536-1	1.7938649936254	0	1.4162900576876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25155889-1	3.92654051918948	0.0188515729798795	0.832248470351568	0.0226513759429512	0.981928362247928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89005632358793	1.57664565284388
Merged-chr9-118645057-1	1.84445682282127	0	1.50093182976333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82032379-1	2.19894772539896	0	1.47964803943721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94728341-1	1.00423386938901	0	1.89758523643606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21567971-1	1.55759367570812	0	1.80017345135753	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35645964-1	3.50163234323598	2.92793679344406	1.04785349341609	2.79422344043415	0.00520245186265547	0.0672255130348199	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.90291182009043	3.64575952610471
Merged-chr7-144980002-1	5.30061281290108	-0.154480772006569	0.701584712949304	-0.220188338136911	0.825724478586287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79895791864611	3.00966469948822
Merged-chr14-60695358-1	2.85053714035762	2.28371420338528	1.31873837799426	1.73174167180809	0.083319567491251	0.540675318498837	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2545004106158	3.04505084447063
Merged-chr5-148711630-2	1.99025375406531	0	1.42566841476303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5139148-1	2.49513758121869	0	1.34770821259865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35267708-1	1.58638462718532	0	1.52467464935331	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26128949-1	3.3955709714576	-0.228796215902071	1.04594947734324	-0.218744997591301	0.82684869470101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50599425456572	1.04220233489076
Merged-chr2-157075862-1	2.20937431331927	0	1.36307543717407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-81588054-2	2.81513858805385	0	1.33564165576904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167228821-1	2.46779319930304	0	1.46606766255066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125607051-1	5.93807660129525	2.11900009849502	0.788246480327084	2.68824555691734	0.00718285539086928	0.0855891444879183	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90749025944551	4.11876479489371
Merged-chr9-100777263-1	1.83590273745766	-3.80390531029909	1.25461676253179	-3.03192610197785	0.00242998685373343	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28984216761421	0
Merged-chr10-82909477-3	6.8347308738374	1.66417638353782	0.610213850143145	2.72720191969984	0.00638739390230106	0.0785750455458895	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26392200615189	3.55517181224799
Merged-chr5-140396733-1	2.20906100191475	0	1.43118479828256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64403589-4	10.0204819891095	-1.32970408619632	0.515534754758085	-2.57927147282298	0.00990089443587323	0.110086957185905	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.24895894123284	2.89285035065765
Merged-chr2-90575857-4	5.30608990190244	0	1.32545769937499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21394027-3	8.55878589137273	0.311584051462998	0.644818643005762	0.48321191523027	0.628945275915544	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63032548200906	2.92526156064402
Merged-chr2-84064557-4	6.52981956638804	0.926569458574436	0.806608433607668	1.1487227506787	0.25067032159025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77088982507396	1.79479390299285
Merged-chr9-77596564-2	6.26513188249471	1.03574314204744	0.599804104416693	1.72680235833781	0.084203164818309	0.545055969115128	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11486076085358	3.30396375559138
Merged-chr17-31685690-2	7.58821819506158	-0.526471800034004	0.608212220103634	-0.865605429539541	0.386706577079672	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92353205362046	2.09032553771468
Merged-chr13-99939475-2	2.99418632673002	0	1.33932065513854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80043495-2	6.78576494630983	0.34688522370753	0.562102077888164	0.617121404373364	0.53715465153053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94746255804612	2.50862919626934
Merged-chr9-120098912-3	3.63983588050726	0	1.33994706296852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132755978-3	3.32021739654234	0	1.32754886312129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67260595-3	8.21205329831752	0.75694873515265	0.684741748607307	1.10545141535799	0.268964035510616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76168942681349	1.60340856582165
Merged-chr9-7814086-2	2.96830064023349	0	1.37366726876157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67307332-2	2.64763938883405	0	1.34239769321078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92563085-2	2.79718715736846	0	1.35704339359202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180276964-2	3.53524104920539	0	1.36040853182229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29170218-3	12.0086020131975	0.744141617170709	0.44634726896252	1.66718084530992	0.0954784503299868	0.598724997644539	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94820469021791	3.9362504161967
Merged-chr1-53781956-2	9.5559681311322	4.28573739456931	0.774133846109994	5.53617105892611	3.09155636216466e-08	4.64415728832211e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.741231840258805	4.59276362242601
Merged-chr13-41084657-2	2.94047862892842	0	1.34823735419141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86757517-2	3.43855640031354	0	1.31913225084541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146762490-2	4.52564487794888	4.59278268759623	1.0506272402284	4.37146735943927	1.23414302282254e-05	0.000596937897626658	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.34258099779799
Merged-chr6-125481249-2	2.77093597797382	0	1.34185013173684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107639158-1	4.87350787863636	2.25392730190564	0.760386941759365	2.96418465142308	0.00303486119275589	0.044695974645442	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01764940019219	4.19066760063031
Merged-chr9-105384786-2	5.13721574250216	-4.76615344196587	1.15197580579186	-4.13737286668937	3.51304980982089e-05	0.00137793369071162	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06289311399039	0
Merged-chr10-22017415-2	6.60832068935105	0.77946033664478	0.692481690487493	1.12560425402158	0.260333066670042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6554853829486	3.13607820003867
Merged-chr7-114577134-1	3.06202943953656	0	1.36946700973788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88495413-2	4.11109979900405	0	1.39744162366815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99583689-1	4.49471136833505	2.35259688847513	0.924536153879384	2.5446240026456	0.0109395462118845	0.118885013597507	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08202248547146	2.42123658252047
Merged-chr11-101971625-1	2.84688533396839	0	1.32814763514706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30967777-1	7.82670547181372	0.523754009214817	0.666718572242272	0.785569850639311	0.432119533278656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40726997781676	3.2334902315273
Merged-chr10-88304506-1	3.06317958945353	0	1.34301354125358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89101181-1	5.43367778464585	-2.75204866431156	0.888517007665019	-3.09735057468829	0.00195258807426227	0.031874549163313	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42597399871713	0.890396206374751
Merged-chr2-38296135-3	4.51469797701454	0	1.31782929838603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118640098-1	3.26710834133002	0	1.35222997453908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41624834-1	2.65025874065814	-1.42810088042707	1.15041308929708	-1.24138093847634	0.214465057363258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06331349391845	1.45547307112966
Merged-chr2-62639955-1	3.45543534798979	0	1.37114339187614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105849539-1	2.96530596808586	0.978349187312208	1.39389612900541	0.701880984496521	0.482753388534101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04778077059259	1.80499979717705
Merged-chr10-67113107-2	3.29694013209731	0	1.3452583238492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84337917-2	2.7005506396579	0	1.35793637410669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120133599-2	5.6551038053108	1.6472862270972	1.08605711051769	1.51675838327875	0.129327697832933	0.747391241325665	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.48219169541115
Merged-chr4-138042356-2	6.00713217350386	-3.37811185105942	1.07554066150896	-3.14084996686226	0.00168458306562775	0.0283713311872452	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79871224923257	0.382164212378408
Merged-chr9-54963782-1	2.50501562082652	0	1.37907352179756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58873144-2	2.88883889133013	0	1.35617605889152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-15294355-2	3.47403506572166	0	1.33161508993766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146099302-2	6.27774600329598	-0.265933808095787	0.656880739431316	-0.404843363691886	0.685592651600761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48871399888461	2.7945106220059
Merged-chr18-52598448-2	3.91664593756239	0	1.33887958103518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-74991366-3	6.32563994311947	0.903939092915509	0.90453177837244	0.99934475993978	0.317627709574716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05257464479105	2.19734880627382
Merged-chr3-8245356-3	5.86876305263799	-2.3173761586512	1.05752992480392	-2.19131024503242	0.0284293491834466	0.245798392662279	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55270725126473	0.844015785373878
Merged-chr8-64896958-2	3.5279283161234	0	1.34496012991501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48775654-2	3.65303784287628	0	1.35400526900137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71680631-3	11.9023729689847	0.566074047616484	0.555344437720323	1.01932063989009	0.308050768356854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62036921721244	3.24222873152439
Merged-chr19-12564350-4	10.5787097129666	2.21385670419712	0.464964455987949	4.76134611084015	1.92305911040064e-06	0.00013585321148999	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36330958767368	4.44576761387673
Merged-chr16-31907158-1	2.30869145135192	0	1.36804270464988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122797050-1	1.8748104566564	1.99127527748404	1.40837703881844	1.41387939635442	0.157397316418686	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.03300427768847
Merged-chr2-58574242-1	2.56991658891147	0	1.3567847415152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148886548-1	0.974410410471357	-2.90160671723929	1.89983610692192	-1.52729317369403	0.126688126175191	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33119961952346	0
Merged-chr1-155025961-1	2.41660699036673	0	1.36231062753027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34781238-2	3.49427986337255	0	1.32332594798372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31029283-1	5.76894791310887	1.16330874475089	0.843350825762235	1.37938887259578	0.167774888218981	0.897170036461337	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80068245759015	3.70834153734062
Merged-chr15-58147022-1	3.06592702565104	1.28888294928748	1.31899451018649	0.977170821662663	0.328484590721679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21066910011236	1.68041597300842
Merged-chr12-100538609-3	3.5620637639222	0	1.32733111654101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71104903-1	2.05547360356291	0	1.41747346480917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34022148-2	2.48413769714131	0	1.40699559085737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104227701-1	2.10274422923371	0	1.35485926166557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17727672-1	1.65053027611496	1.74550279400998	1.26965372140855	1.37478649853719	0.169197645109595	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0.989878296978726
Merged-chr17-31871087-1	3.52152450749794	-0.249460945929606	0.922254427771875	-0.270490374909116	0.786783020757488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81073529598922	1.69181239031707
Merged-chr8-124375124-1	3.64174628903383	2.77746935349053	1.25165246384679	2.21904197348388	0.0264838691117784	0.232672077302806	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23332264335096	2.43998711580515
Merged-chr4-48243922-1	1.31933135600657	0	1.71545037751616	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94055148-1	2.62818994567134	1.33064729476404	1.35600125280852	0.981302408097366	0.326443635586084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.469435083901436
Merged-chr3-86129959-1	2.39003928267221	0	1.40990026156014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137753092-1	2.04817798154312	0	1.46659084080878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156410833-2	6.40970470150669	0.393812840176324	0.753283166939222	0.52279522158511	0.601116765243815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35176233290246	1.92713101668536
Merged-chr14-54637226-1	10.2491846704908	2.2638937893331	0.644415030332645	3.51309898554739	0.000442912438211425	0.0100425247006814	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22086827539165	4.30426983780186
Merged-chr15-74896477-2	3.38938988670777	0	1.32918106614584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20290587-2	2.53546516560691	0	1.36576682133682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88869622-2	6.97340584288681	0.998837993466139	0.72286454061441	1.38177754938313	0.167040014474925	0.894299238574151	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3513602255812	2.73430231295182
Merged-chr2-144721989-1	1.56571303667428	0	1.52420062675007	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110711051-1	2.43005242686464	0	1.35975854698769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67318212-2	4.27134860648364	0	1.3334003190963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74909292-1	2.42254716645899	0	1.36392927033147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13992680-1	2.39506387104871	0	1.40346585309166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102492972-1	2.54584873024718	-4.18035595159463	1.20119859180403	-3.48015388972136	0.000501125848235747	0.0109887817714138	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7759574965647	0
Merged-chr5-115514475-1	6.92011783902794	1.45995224721374	0.616731424275728	2.36724154104563	0.0179212324741962	0.17209123545317	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35869553402155	3.8808117336549
Merged-chr19-56475038-2	3.15966102768258	0	1.33082579361439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25352360-2	9.09733439907025	0.202804324121916	0.693186377032356	0.292568248369442	0.7698521864126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57624153575909	3.14949198390242
Merged-chr12-110373573-1	1.87780442508099	0	1.35737865454312	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117199202-1	1.42017551659998	0	2.39985996717771	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3586775-1	3.61439705456183	-1.71680163808317	1.17991120191189	-1.45502613696803	0.145662025793038	0.811598800944051	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2005489260835	0.306240821987646
Merged-chr15-5288685-1	2.69254566566361	0	1.35144315763614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5799241-2	4.24591246652805	0	1.32820705430177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116028331-3	8.77194156277972	0.962080797543603	0.511892761764895	1.87945770951431	0.0601820228211251	0.424555161747732	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01487917482845	4.16850635525073
Merged-chr15-66979513-1	1.3425598233529	0	1.50243841683805	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79407426-2	2.57245462523782	0	1.37938665300926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53905864-2	4.30284404277473	4.2107471905381	1.07936663830199	3.9011277920932	9.57455879711062e-05	0.00305796245921794	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.91063189988333
Merged-chr16-64884117-4	4.73486451693751	0	1.3066063966924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-8760237-1	3.20956289738506	1.862684606583	1.23879738893105	1.50362329080327	0.132678390648538	0.761060578943062	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	2.42760559021134
Merged-chr8-122558930-1	4.52571997315867	0.0399015577982904	0.766121664573003	0.0520825342023575	0.958462929763617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07618435753128	1.9001726754443
Merged-chr4-148760348-1	3.59868120566114	0.520468685839097	0.882216343875866	0.589955841843178	0.555220254686639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21431182721156	1.86437446250718
Merged-chr12-40539069-1	2.28361313870536	0	1.434845514271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61477674-3	3.93439091509896	0	1.32869693478833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104856276-1	2.09242590045625	0	1.36305091265782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117485606-1	4.9605002221272	0.226852908484815	0.597583398962012	0.379617152817251	0.704229626252178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38644745379525	2.93342099941049
Merged-chr4-155511271-1	2.24337571486763	0	1.37521938958487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136702572-1	5.07286213611727	1.94656795431505	0.76805393129914	2.5344157161236	0.0112635019264737	0.121418271476075	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32683770408583	3.16636329215445
Merged-chr7-90822332-1	1.1940431919562	0	1.69266953957556	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38695417-1	3.47949609947191	0	1.31858241790123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24010016-1	7.38719737766217	0.802344917125118	0.781206792953429	1.02705829539932	0.304393014872123	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22788063703338	3.89166297673732
Merged-chr4-117544833-1	2.76594953475267	0	1.35340785179976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132054031-1	2.79369990745445	0	1.36617184350654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76944882-1	1.72188342633533	0	1.51662992482581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20023232-1	1.64541959717485	0	1.44423894812109	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167823604-4	5.0394837914067	0	1.31615156530088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44275247-1	3.59170996131072	-1.61980271728902	1.22021031252214	-1.32747830490052	0.184350511912006	0.960881275536569	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66470883260871	0.469435083901436
Merged-chr4-99169635-2	8.7037197443701	3.75118707218633	0.953505650559044	3.93410051632835	8.35088332199708e-05	0.00274771813473928	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	3.41751376042665
Merged-chr5-37971884-3	7.78730210987689	-0.779016724905656	0.559079027104537	-1.3933928606483	0.163501023457492	0.880809930658733	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69835511903946	2.38097024974186
Merged-chr1-192088088-2	3.80556431489575	0	1.31813749448713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43530801-2	3.46960915359456	0	1.3081077194319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99299470-3	4.01285499368401	-1.75665500135652	1.18070295046296	-1.48780436321238	0.136802494681955	0.776968245454774	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794807375335281	0
Merged-chr1-37308191-3	3.22785166046499	0	1.38426248700267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97760187-1	3.25342830229602	0	1.36895855766745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35888271-3	7.52512865921198	1.85339002981216	0.742982810319822	2.49452612371255	0.0126125442054368	0.13210118827512	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49961781270707	4.17737099179639
Merged-chr1-105650877-1	3.36248460767062	-1.66064481427882	0.822706584720134	-2.01851406700936	0.0435377506287927	0.336161975802218	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58307084866327	1.47158896970822
Merged-chr1-37531748-4	3.45333663205645	0	1.38033714734876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132039062-2	3.5578732764318	0	1.37608285921338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95256328-3	3.92777013728219	0	1.31198756403331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57778620-3	8.96021071881327	0.8278252386511	0.50461414187877	1.64051137284611	0.100898885763101	0.625198045616876	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08105255344934	3.62156610423494
Merged-chr19-43679319-3	5.70109458050733	-2.72437424789528	1.053560333703	-2.58587397488647	0.00971324379041074	0.108536530220277	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83906228643731	0.609949614787909
Merged-chr13-64110522-1	4.2201480644615	1.29426034217996	1.34755195070724	0.960453021125227	0.336827264107883	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr17-29022448-2	3.65086068641863	0	1.32313362097785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117882353-3	4.03859022688515	0	1.32189953126373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93906421-3	4.44597401103088	0	1.31810533957434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30046176-1	1.73172570651616	0	1.44123470158936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125313491-3	8.14647237311332	0.453229432983365	0.675845429152276	0.670611079743275	0.502468322331432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31793872798928	3.20213796229157
Merged-chr13-91464774-2	2.7256584035174	-0.658408128164043	1.24296881043955	-0.529706073582983	0.596315736263372	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74142736653217	0.773587911294612
Merged-chr6-124282906-2	3.07181619108616	0	1.31892028320969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-60897421-1	1.19227151301432	0	1.6610005967049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142735531-2	2.6751477364933	0	1.34497071270048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107671702-2	2.71138257508737	0	1.38166874712621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151820743-1	2.21794448124355	0	1.36159737744229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149207277-2	3.14813438512202	0	1.33363746473979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95154096-2	3.34850746977541	0	1.34926259420559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24407097-2	4.27000752928489	0.794207484043603	0.855648423033631	0.928193709780713	0.353307096740726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.94451236602085	1.76302217368042
Merged-chr19-34756750-2	3.50806835403605	-0.973000435183324	1.01434032478646	-0.959244556690734	0.337435558866003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88291081025536	2.15768836563541
Merged-chr2-167269936-2	2.7791225738942	0	1.33018252225791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-11369977-1	1.32999463434793	0	1.44072901382829	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105631182-1	3.9732446454885	-0.901464361408578	1.03700713794672	-0.869294268497978	0.384686197004257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58280831946285	0.666688015277142
Merged-chr5-92374249-2	7.98493269219037	-1.15418268793165	0.609256258011151	-1.8944125279884	0.0581702748327185	0.414762473982427	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4156040517036	1.62128842389662
Merged-chr4-128824401-1	1.71966034741478	0	1.45661894114154	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78353256-4	4.01064704213332	0	1.34053981646863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67315322-2	5.7411020306114	0	1.30859535321523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103272207-2	4.10832000406758	0	1.31629908960147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68077592-2	4.31536797415993	0	1.30677364348675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22368077-2	3.86373037892219	0	1.32032260107089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19562609-3	3.804969969112	0	1.32707727787117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167230012-3	5.78754986698563	0	1.30898796005523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133206078-1	5.8267097182518	1.38893050095424	0.749970283021632	1.85198071496678	0.0640285922340735	0.444729207921744	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74358978148879	2.58803346718389
Merged-chr11-72564518-1	2.32457956820538	0	1.41422086416123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55803774-1	2.43446898526386	0	1.35946211195926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-136294618-2	3.31996792745991	0	1.36766680549309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120102957-2	3.1576435073674	0	1.33240461264276	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61576137-2	12.5721560456562	-0.323020611859254	0.414069989727509	-0.780111140321537	0.435325459695777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.46358924489213	4.10090416753232
Merged-chr17-63430577-2	2.94013940986763	0	1.34875893706358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145877206-3	5.75610413229352	-2.37723135023833	1.04543406476112	-2.2739180120188	0.0229709165116775	0.208886377730598	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62462318797865	0.609949614787909
Merged-chr9-105779338-2	9.45079678944466	-1.27097860153256	0.518645333795848	-2.45057367475102	0.0142628770805077	0.144445899674642	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.87064144739908	3.46980391248742
Merged-chr5-141094399-2	2.62070534034242	0	1.37011456550856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80123879-1	2.14429957101841	0	1.35560606319877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94381516-1	2.0743070407794	3.50161223021841	1.31784965976067	2.65706501821635	0.00788242391524617	0.0919466035640265	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.961728545204858
Merged-chr6-38145827-1	1.20923056682713	0	1.4792855887271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96294717-1	1.94290714231997	0	1.37247484142687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13319450-2	2.47984793258885	0	1.38815036105223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132546090-1	2.07397605376183	0	1.34826978662508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85882228-1	1.10396182027956	0	1.86239474463749	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20750398-1	2.22617060619393	0	1.45309586839558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25167273-1	1.57316726261912	0	1.50157781864664	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34213089-1	2.20536894928422	2.32256229267282	1.09988894554315	2.11163345361734	0.0347179008630038	0.285334235548406	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	2.45916162824808
Merged-chr6-120181498-1	3.47025934946194	-1.00541351558927	1.20401096014034	-0.835053457878889	0.403687610107273	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31297766861246	0.609949614787909
Merged-chr3-127151531-1	4.26480224193415	1.00204835715446	1.13578621305694	0.882250854637045	0.377641166546578	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05691124815839	2.76859093112924
Merged-chr10-26806325-1	1.46982421227014	0	1.52909887671153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-55429430-1	1.99156458140598	0	1.49022198850353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111133316-1	4.39766488123769	1.95795827677378	1.29936970894695	1.50685233255174	0.131848512017611	0.758030341923529	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr10-84381718-1	1.3340988311106	0	1.43890889262785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92895256-2	3.57651762499075	0	1.34329101228632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10350712-1	3.0703062197065	0	1.33355686586722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106567666-2	2.42692890859348	0	1.43083286085467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96531268-1	2.70993772622158	3.27213742265953	1.74950426538773	1.87032263218538	0.0614390285301828	0.431474055816189	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	2.30110526804544
Merged-chr3-146157613-1	3.63971091720144	0	1.30671535330702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117431733-1	4.80506488646629	3.88880789625411	1.05911522575624	3.67175147867161	0.00024089387809399	0.00631426047249494	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	3.79609831033908
Merged-chr11-103418255-1	2.44941621305421	0	1.40427025348205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71278250-3	7.68765623890608	0.972702942689173	0.829131543419957	1.17315877125724	0.240732141928879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01815444192348	2.93400390053251
Merged-chr10-21429391-1	2.58088372190358	-0.82684701169985	1.4112047017365	-0.585915714908267	0.557932156252384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0
Merged-chr11-78885124-1	2.33271551476908	0	1.41794784460924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102043937-1	1.65469488369942	0	1.43391652010051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114785903-4	7.91730812627615	1.33414715469725	0.615422188170431	2.16785676620385	0.030169586182244	0.257724238078828	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46023368700741	3.19026700899049
Merged-chr5-64722340-2	3.17531220790081	-1.86130832396556	1.16152406256434	-1.60247073991414	0.109051552857679	0.662336906128627	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36196353701645	0.382164212378408
Merged-chr2-166046439-1	2.74949088866193	2.50799211933377	1.28962316324969	1.94474804020575	0.0518053105354733	0.380452890790182	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-25166517-1	2.31343237676649	0	1.38011525327853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121477866-1	4.96689780725941	-2.88219511106976	1.16369458446129	-2.47676250242585	0.013258009085499	0.136951922494628	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26559075112234	0.420961122473315
Merged-chr17-11637894-1	1.74857624112027	0	1.43325616803661	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50816488-1	3.32382675452801	2.2782796858638	1.17451845997705	1.93975638825491	0.0524093030954633	0.383380535103117	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17712904888865	3.73221591485062
Merged-chr10-95509496-1	2.29956960723032	0	1.36226341748615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58553134-1	3.63463172942547	0.0625978938791989	0.926647338719318	0.0675530930307456	0.946141396389648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42017635034554	1.69733277475078
Merged-chr19-45544281-2	4.41188060769826	0	1.32230512925884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84064673-2	2.39470823898491	0	1.3578355171612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108255481-1	2.88160445257736	2.50818632696411	1.27260355761866	1.97090941004244	0.0487342385986033	0.36407769011825	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr1-191131509-1	2.90068203393501	0	1.44704883631162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23872924-1	2.9079565686134	0.0108747250079758	0.873235282676181	0.0124533733619287	0.990063902491045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87668365143716	1.46894927517136
Merged-chr7-83482816-4	4.56542534398889	2.48929949150875	1.22038669627766	2.03976288753511	0.0413739478876973	0.323710728594829	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr1-171821052-1	6.7697429157554	-0.675565354857004	0.714214423907013	-0.945885902389672	0.344206784689042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66220346393307	2.74201053162259
Merged-chr15-99471205-1	2.32534331738843	0	1.34806472566483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111567773-1	1.52556770207491	0	1.49461549520195	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134698647-2	3.240860749842	0	1.33131342221027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27757734-1	2.25078259102378	0	1.34721816613943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59058150-1	4.48620588441813	-1.02801939241479	0.862786533535661	-1.19151070682804	0.233453155955238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43889550627108	1.29358708977899
Merged-chr10-59899757-3	3.48021955050713	0	1.3830484428267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79112975-2	4.01837913223869	0	1.33746042630939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-97116165-1	1.90402017094768	0	1.36962341364137	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173634434-3	6.91035117925179	0.715260799336942	0.800101706156923	0.893962347327702	0.371342037271487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3939482523783	1.87744667331019
Merged-chr3-107149208-1	2.5237486681496	0	1.33077224645597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143605509-2	2.5719128825363	0	1.42323225552812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74995100-2	2.46141640086453	0	1.34804704997521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64936679-3	2.75418050787586	0	1.35486059601212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72164608-1	2.01687608114959	0	1.45638749494253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-45026470-1	2.10851938361165	0	1.3920737560216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3512600-3	9.80664928252859	-1.51058959231768	0.65439638050168	-2.30837094661132	0.0209785134951532	0.194476087793202	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.87221714473617	1.80725200154661
Merged-chr11-79019491-3	4.37846887883333	0	1.31862768885524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45430572-2	3.37667477142306	0	1.33796810732678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25023405-1	4.4528560764359	-0.0019795522074002	0.909748888582104	-0.00217593253725811	0.998263858393186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63461734472901	2.72549481808021
Merged-chr11-11836896-4	5.67931278828042	-1.53658099732576	0.740039190251594	-2.07635084407268	0.0378615140387767	0.303533124325593	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10474540586983	1.69181239031707
Merged-chr11-96859832-2	5.77188681458891	-2.3585861669021	0.751626070143099	-3.13797812581601	0.0017011757184462	0.0285991840745011	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67332942390741	1.20539659680455
Merged-chr8-84726011-3	5.2558228193771	-0.883992403006364	0.870865656673173	-1.01507321621034	0.310070927888469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48456433406938	2.01913900782325
Merged-chr4-19870570-3	4.24930955064112	0.111190487018996	1.37059617498404	0.0811256364554578	0.935342037936321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr7-90243336-2	5.99856881346026	-3.38783369561763	0.85138485295013	-3.97920362792275	6.91464988414257e-05	0.00237438103693736	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.01514555024271	0.869764003783424
Merged-chr5-64410549-1	8.88928570661784	0.31436863861282	0.548664520805915	0.57297059804606	0.566664601819728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56589731776144	3.8203197719781
Merged-chr4-55342806-4	11.1219468139249	-1.04988625251305	0.597937634367549	-1.75584574739728	0.0791147506405397	0.521061481520508	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.00279844824248	2.77823742786405
Merged-chr4-100998269-6	17.3374505621216	0.645983540611564	0.504394471633078	1.28071098503531	0.200295199892809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.36347231262398	4.74173654466067
Merged-chr2-71336493-3	3.9487159017388	0	1.3199271370858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57761943-2	2.45399194445408	0	1.39483183792503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132114180-4	4.53409478307961	0	1.34450058301235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69051830-2	1.73304520282992	0	1.43802262109409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68662577-2	3.39987733408165	0	1.35550192623132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17709701-1	4.484003015366	-2.25649708849721	1.15624594933512	-1.95157188640944	0.0509890537440101	0.376234271223587	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34479217932933	0.803125334851723
Merged-chr13-23412558-1	1.95022117553591	0	1.49421238702057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109922414-2	3.15710109439209	0	1.32045791468909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113942783-1	6.82156472307786	-0.0699132844981481	0.712966033614513	-0.0980597689117246	0.921884833268045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13901606103796	3.0567288954595
Merged-chr4-149756579-2	2.22461268821801	0	1.34721511590967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73918216-2	2.35520736918649	0	1.38923703404613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58803098-2	3.48697326079303	0	1.34324540129256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58457139-1	4.4418664205658	-0.59504824286711	1.1708259303613	-0.508229470698077	0.61129242540947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.779615389831573	0.733321818366247
Merged-chr15-67095551-2	3.3085646524499	-0.513639900969665	1.16708404531195	-0.440105323205214	0.659860826675778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24691426681727	0.73596151290311
Merged-chr13-90886866-2	3.95063512006496	0	1.31238442217595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80684033-3	4.38769475475128	0	1.31036163364757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117842269-2	3.34190725974817	0	1.34107058391032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128973854-3	3.80102887826896	0	1.32717223183842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62511659-3	3.69538851296654	0	1.31352066088615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80242823-3	4.09780735297439	0	1.31696491638654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70873481-1	2.33452620132542	0	1.40587552325401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21220726-2	2.7064609497949	0	1.36914919768594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42139985-1	2.52499535453466	0	1.36338641767433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45032017-1	2.794375540662	0	1.32730586136063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129363284-3	8.46960196990983	-0.310118950129437	0.78176598587199	-0.396690257358188	0.691595885481558	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48840413224671	2.08315481461717
Merged-chr7-45709405-1	1.19889805177798	0	1.6585662572213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39085851-1	1.4871196014596	0	1.55754042496377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97338972-3	4.07471290510694	0	1.33121231966238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68362048-1	2.2787572507731	0	1.36149252253621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121330535-1	0.79776164659088	0	2.22748536767234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107446820-1	3.22846388622311	1.82716673624308	1.34472211317862	1.35876901133429	0.174219795902903	0.923097931003898	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	1.05916644618774
Merged-chr11-121475854-1	3.23824096410035	0	1.34860657022258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46115902-1	1.41111801612656	0	1.58930904010211	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146823988-1	2.2803082617343	0	1.34533926322841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72587127-1	6.28310127568754	1.48302411076833	0.679741727497521	2.18174646454044	0.0291282496305847	0.250581174349682	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97372327886153	3.07172379387659
Merged-chr13-23436419-2	3.2277217230003	0	1.33097713967441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41574006-1	1.83232620586601	0	1.44206396982951	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65950965-1	2.4954013683116	0	1.39889554229834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102616415-1	2.84581834862053	0	1.35605630234338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73629611-2	3.46229037748979	0	1.37599165104929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96131548-1	1.53144450141392	-1.07822179945332	2.16760265836336	-0.497425944415212	0.618888713740773	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr1-134244375-2	2.58613562627363	0	1.34792976378991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129430663-1	1.76689542506533	0	1.38792711267624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52071400-2	3.93172654558171	0	1.3272782616743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36621326-1	2.34391578824162	0	1.34168102053802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15709839-1	2.34761130198017	0	1.36824469936163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35099672-2	5.61563784819967	-0.0201155485410947	0.797362322629847	-0.0252276135580998	0.979873411527854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18018800410262	1.57664565284388
Merged-chr11-51356577-2	2.66808205490547	0	1.46374510882851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-131825977-1	3.39454915941282	0	1.34456252787443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24738902-1	3.71555789399903	-1.22887462805823	0.865379496315232	-1.42004130360235	0.155595656759832	0.851126216861543	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29008497993975	1.52944205045577
Merged-chr4-47010467-1	4.94521242461528	0.136571582296393	0.956271667890416	0.142816719225486	0.886434932408055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44089144253588	2.00433461556273
Merged-chr18-5133238-1	2.87091628855877	0	1.34775429500974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133906385-1	3.14099331301522	-0.162789479664204	0.895014995780508	-0.181884639287235	0.855673259495743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17561467557161	1.84016081186083
Merged-chr7-121275347-1	2.86677596975448	0	1.35553414753883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35800784-1	2.61844438538446	0	1.34154972179947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113814528-2	2.94838342066887	0	1.4426069528724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117111735-1	1.79656177102091	0	1.46128069311156	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38092073-1	1.3884013568469	2.49889954894082	1.5418663931227	1.62069785040185	0.10508245487949	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr12-54806322-1	2.94937794950191	0	1.32681325338158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48467054-2	6.63094092286498	1.09151977512939	0.673196653294309	1.62139810081942	0.104932287817423	0.644152939464359	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04862414738885	2.41046107166493
Merged-chr2-91136753-1	4.15129050416513	0.322433058448243	0.984445517231577	0.327527580556188	0.743268886014431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0477622476686	0.905469781553611
Merged-chr12-100528478-1	1.87050397278407	0	1.38708983293698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70891612-1	2.34930910614595	0	1.34470450721727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81011460-2	3.58602295912462	0	1.37950080086129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90259524-1	1.44627643925314	0	1.55018963888571	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67047082-2	2.48409768987752	0	1.45118410477925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21242393-2	6.51673860215394	-1.1426881911152	0.761713991524672	-1.50015386855105	0.133574549767556	0.764523301139589	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43052892712557	1.98859768019381
Merged-chr7-64227092-1	2.44228992444596	0	1.37528119666656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102493500-1	1.78857466962437	0	1.41304568809318	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90420880-1	6.00960723788654	0.49516610790201	0.774541177399292	0.639302495917195	0.522626165090604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64814656443867	2.48291042896862
Merged-chr5-125272789-1	1.61424420995282	0	1.67264159934343	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10849087-1	2.07096412607456	0	1.39270851587026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37997631-1	2.0519630289656	0	1.44925331331316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-147064560-1	1.64612032106535	0	1.41904364806161	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55446823-1	2.79605671225942	0	1.36283723249979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-110080957-2	3.54096991963968	0	1.33096646165894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34952820-1	1.17360214069169	0	1.66791836790251	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33962902-1	3.06240561193146	0	1.34712192692565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45931336-1	3.6916346549003	-0.208570447022817	0.931250431873121	-0.223968161392739	0.822782077459748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63513126856978	2.35544309136857
Merged-chr3-15580432-1	1.17183461929764	-0.663776452260446	1.3925174025708	-0.476673721301445	0.633594478379349	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73255398212476	1.52765326036496
Merged-chr17-56751639-1	1.63632995132353	0	1.46884909836929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58188645-2	2.99127761136955	0	1.32750648681306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105328636-1	3.71833017205291	0	1.32505799256921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55887973-2	1.88413536719301	0	1.38386407728256	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135377974-1	3.58343113417275	0.236201819560781	0.925755713654345	0.255144868216252	0.798611210808523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.964582177197551	1.27911570690487
Merged-chr5-3224039-1	2.63665148634521	0	1.32369662163064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3024405-3	5.39544264360178	0	1.43743964776326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79368876-2	3.03843649007286	0	1.3640132060553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102690016-3	3.94030102342671	0	1.30721052891423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53344938-3	3.95225533576318	0	1.32162810127695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78607002-2	3.45021120126501	0	1.33420203923164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51360340-1	2.36592298618781	0	1.38413260863889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117345375-3	4.2408230287522	0	1.32194994157567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56951035-1	2.45773237943559	0	1.3943343459769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117281953-2	3.23420199179131	0	1.35040688590933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52199170-1	3.47357067878352	0	1.32049150658007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77049493-2	3.40875557028955	0	1.35702225837743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19162253-4	16.9889816165122	1.16002004936059	0.466372733942405	2.4873239041111	0.0128708155407143	0.134011522040076	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49555180631203	4.82630986129691
Merged-chr2-32502058-2	3.46785841830781	0	1.35305729998783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89000488-1	2.04161593825028	0	1.38728793720004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9429542-1	2.07274545500847	-2.47712457026062	1.40103699874171	-1.76806506358173	0.0770500271637973	0.511181373781493	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79830780240274	0.918668513615376
Merged-chr14-75121845-1	3.39186703034181	0	1.36062479060804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31047819-1	4.8520287744769	1.70966843519153	0.724662171071331	2.35926270673682	0.0183112876134681	0.175065018345236	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32064508794532	3.09204907037813
Merged-chr19-47408852-3	7.45652428200389	0.682738011823691	0.614647401527388	1.11077995307082	0.266663077454321	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97374092850517	2.98459585107782
Merged-chr5-74253864-4	7.94957330985658	0.486363376971549	0.657408131053476	0.739819533707572	0.459409504719513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39824075212522	2.3060951186802
Merged-chr8-94486187-1	7.59146336766314	0.196506118942188	0.586215643731803	0.335211318639069	0.737465684446623	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58972263013532	3.16823365037562
Merged-chr11-69614186-3	3.31196416114903	0	1.33228689509086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78441033-3	5.09205663747623	0	1.36802923162992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55841854-1	2.53417530757083	0	1.35757404034247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47255833-3	3.64561591276395	0	1.3389591087522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30589876-2	3.3068319123375	0	1.34393199581035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12155823-2	2.73880702664823	0	1.43617513105902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83091587-3	9.84373503721819	1.10131916741918	0.442165940167987	2.49073722639235	0.0127478362511071	0.13311283280039	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67666823329395	4.57235412639696
Merged-chr17-71869563-1	5.70574329122691	0.74804774241523	0.633996523575143	1.1798924987742	0.238042973680469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79406272721054	2.88039562928176
Merged-chrX-135569657-2	2.60621155198557	0	1.3546404935086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121815292-3	4.41678775486339	0	1.32381165037532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91091715-1	2.11014512378198	0	1.4217640580337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32530630-2	2.76454980851585	0	1.36996711105493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95573419-1	2.06541159431376	0	1.39229251314242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21366547-1	2.34210285352501	0	1.43068851237783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100311376-2	1.27340563207149	0	1.65780110481117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99500171-1	2.34509061985762	0	1.40121625504253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70755837-2	3.51235068981175	0	1.32608552670493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95798742-1	1.44110739588931	0	1.43795609907448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85572399-1	1.65606368657517	0	1.41163912117554	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70832536-1	4.65315453980826	1.47358923815266	0.929134549838574	1.58598045719931	0.112743742809563	0.678497285949895	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23911956775372	3.067986562315
Merged-chr7-109541757-1	1.46975353700798	0	1.44068042345653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102456987-1	5.49953026750624	2.02423567490538	0.871367903379658	2.32305512637572	0.0201761911977515	0.188478292683054	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11479007664466	3.29330441206616
Merged-chr13-8745788-1	1.82812763602584	0	1.37004300467893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56299032-1	3.59220209984876	0	1.31666309718366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108287221-1	1.63842442812837	0	1.41971552857005	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67404619-3	8.26710054288682	0.812417508730782	0.608171330598623	1.33583657738539	0.181602694596032	0.950425250766645	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74197942701303	3.45977098888523
Merged-chr10-56427560-1	1.97590707868925	0	1.49249129960973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40457630-1	2.04304660158477	0	1.38066535454357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56726824-1	1.68023775254235	0	1.48088717748663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40656614-1	2.4101905628171	0	1.35322631970721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55963574-1	1.42278820835333	0	1.49335476170355	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50155041-1	1.72068415876511	0	1.48331900962653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35534179-1	0.847123224160031	0	2.20409383914909	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50991793-2	1.89039321879708	0	1.6002608270302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73726644-1	1.44775310681766	0	1.72403795678821	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165959944-2	4.33076456962663	1.95120811858905	1.28029767336062	1.52402691904248	0.127501986849792	0.740204764808681	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chrX-129765447-1	1.59583540999537	0	1.47730021077117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18373013-1	2.16018587205061	0	1.36582854868384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100002051-3	3.96864936120783	0	1.33272765711263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118237476-1	2.11775568866884	0	1.42997709140941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104025593-1	1.97683510135268	0	1.40490992912271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16226352-1	1.70697257486385	0	1.41742282741198	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-141064963-1	2.49266913384417	0	1.37171529315947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33540240-1	1.61639105360271	0	1.4133794878289	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3340458-1	1.9061960203015	0	1.43937257354218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30755055-1	3.27835375597841	-1.21852530168179	1.17299387151409	-1.03881642630317	0.298890120350686	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55852523739172	0.73596151290311
Merged-chr11-10064907-1	1.49251918391332	-0.00106512175985708	2.09634918388889	-0.000508084134095065	0.999594607531259	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24309350863098	0.958904680953568
Merged-chr19-10940575-2	3.01253220658567	0	1.32296275626149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136598657-2	4.61021376687066	-2.73800826202117	1.00210711934345	-2.7322510829132	0.00629031831528822	0.0777320613900953	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40146748436573	0.733321818366247
Merged-chr7-130041270-1	2.23706492176026	0	1.34414915734196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91051861-2	2.78536318066123	0	1.40871075635442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21983215-2	3.97705172193318	0	1.31719430257651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129472107-1	5.06202850305214	0.759067060666182	0.803025677657803	0.945258765423497	0.344526784399163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91794393466812	1.92797716160218
Merged-chr1-161403432-1	5.21444884866059	-0.856416566907728	0.798500706418669	-1.07253075673385	0.283481706990073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65258474715079	2.03933265466087
Merged-chr3-90445619-1	1.85076728952016	0	1.43095414656732	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125489684-3	4.39468994579116	-1.92416423116644	0.929178968199543	-2.07082198050055	0.0383754353263158	0.30671247515086	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10967069173289	0.735627456805112
Merged-chr2-102945282-1	2.19874354227454	0	1.38827825095859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-132022185-1	2.61640136851822	-0.50433462997385	1.14343616531233	-0.441069335808607	0.659162802046755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46509026701495	0.666688015277142
Merged-chr16-64876945-2	3.14462869509002	0	1.34527277845985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87481057-2	5.9827539669146	0.123862622529118	0.768520222806316	0.161170283947537	0.871959285088674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31748343022065	2.48853090112376
Merged-chr10-118131019-1	3.23328788491889	-0.416773943756538	0.981030765942977	-0.424832694575007	0.670958642010272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54166172609266	1.04220233489076
Merged-chr18-9357396-1	3.9291988876197	-0.72111435775897	0.756588838991286	-0.953112603036001	0.340533021210795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89396260444846	1.53823966306787
Merged-chr10-127229091-2	2.57592456687109	0	1.3362258645586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127289484-2	3.70755796694134	0	1.34232322458795	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100533907-4	8.71505593640138	-0.175836294876362	0.467326020437572	-0.376260441718442	0.706723285059896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.71357906832407	3.51388403976045
Merged-chr3-79045663-3	7.16134528028645	0.119147622996492	0.838484440684452	0.142098788260439	0.887001975293165	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22348308530804	2.30811930973386
Merged-chr11-32341312-3	5.61103297595198	0	1.29421268082254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91456822-2	4.33147073155287	-2.45665530766468	1.11809673319696	-2.19717599982641	0.0280078789630418	0.243022554603496	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18679417573672	0
Merged-chr6-119401735-2	2.91425384493139	0	1.33451572054302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3251121-2	2.93643156362278	0	1.37659552370323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-85937069-2	2.52782545998731	0	1.33223564416946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55002149-1	6.7587915419153	-0.436511200599409	0.709394748757316	-0.615329055316618	0.538337433043628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93910409258698	2.57618756717262
Merged-chr6-87504113-4	6.52268960989872	-0.616849506776755	0.87341669515201	-0.706248815943915	0.480033417572764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98142269332715	1.1517642783294
Merged-chr5-88572143-1	3.18069226858222	0	1.32238442369736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75598292-3	13.0964837590067	1.58495283385755	0.479990018455343	3.30205373636328	0.000959796806883252	0.0184655295527214	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33259551651844	4.8363576859086
Merged-chr13-60666130-3	3.76788670467508	0	1.35604943326252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94410074-1	2.36593370099442	0	1.45900593063196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45273978-1	3.54505198254508	0.320350558859988	1.21831904660252	0.262944718588563	0.792593188226961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800023534112536	0.683637474991079
Merged-chr7-102245377-4	8.37663002216224	1.46903147009473	0.703427628904668	2.08839034710963	0.0367626375202758	0.297202933490034	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31852602116399	3.03815873647658
Merged-chr4-137955299-3	5.76224692703533	0.253623572500016	0.778346388369483	0.325849231511588	0.744538428367843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12963760857804	1.77167105195599
Merged-chr6-134471094-1	8.13252070945516	1.40545528555009	0.742694888030534	1.89237237013581	0.0584413846788776	0.416150333137903	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43774057987861	4.30063697193663
Merged-chr3-19301450-2	4.70476077082217	0	1.3407812917206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76750849-2	4.38946770797179	0.447809831497538	1.28042336322786	0.349735754874575	0.726537017682277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0.609949614787909
Merged-chr1-40412625-2	2.26519854745118	0	1.50299252618572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47006228-2	2.30637215970294	0	1.4913327307716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30729469-2	3.36941789613776	0	1.34053607450071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95729110-2	3.43261942694149	0	1.35728169193588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84061501-2	2.36649938386668	0	1.33371451115779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60202336-2	2.68222135428236	0	1.36821235569191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45746525-2	2.89742072486472	0	1.38091315695243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97716640-1	2.08722989126679	0	1.39688392266408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75279846-1	3.5320670093565	0	1.34427463960649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34641722-1	3.52871133618033	-0.0929128603992588	1.12300306474408	-0.082736070199802	0.934061403310107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07325924084437	1.87791898198041
Merged-chr7-97944690-2	3.44815722524179	1.35101045932016	1.31817322930541	1.02491116439381	0.305405106248296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.469435083901436
Merged-chr13-35042273-2	3.91826536887601	-1.64619857738305	1.09689158208144	-1.50078513161643	0.13341114555123	0.763855666099243	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13718533024791	0.73596151290311
Merged-chr2-125789018-2	5.09633215883528	-2.30451759918506	0.788145357600312	-2.9239753517063	0.00345592110926305	0.0492434846938298	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47869137915238	0.735627456805112
Merged-chr12-69511088-2	1.80947826232486	0	1.59644956106845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-43830589-2	2.29488696734966	0	1.4353383707463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38440012-2	3.25358029545583	0	1.36726607601329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79398565-1	4.73587505618694	1.25424579231462	0.856702981880332	1.46403808419313	0.143183542872074	0.80168552759134	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892417252654248	1.63379099656069
Merged-chr6-125482395-2	9.65955034810788	0.827159919201384	0.530102338678911	1.56037779660203	0.118670628646195	0.705160580114053	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3718553911888	3.34876999111567
Merged-chr12-80725040-1	2.34328199130876	0	1.42157529032421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116649527-6	10.1697403614134	-0.0788497796863084	0.550289175869993	-0.143287898697351	0.88606281265381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.68133693376099	3.47765358356006
Merged-chr11-98859314-2	3.64134400970552	0	1.34100156306609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98884719-2	3.16672333644462	0	1.33582250186833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45496724-2	5.26023865915719	-0.174906046440727	1.08557409585139	-0.161118478332474	0.872000086775885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09593933824148	0.683637474991079
Merged-chr2-120007916-1	2.40577578034871	-2.27624460789256	1.2611218654303	-1.8049362795846	0.0710846538086522	0.481257541212203	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13459177597419	0
Merged-chr2-104444945-3	4.607230711943	0.393437459755388	1.23771709864488	0.317873494828621	0.750580898685459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	0.469435083901436
Merged-chr17-69178854-2	4.68323405250982	0	1.33747114076942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-61241741-2	3.14403623645735	0	1.31797481184658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74679073-4	10.565504791695	-0.75440538058131	0.616161697937343	-1.22436266828456	0.220815445686581	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54683081452791	2.47555738456387
Merged-chr8-4109053-2	4.03326712154213	0	1.34614004624938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70195945-4	6.80965190793497	0.21307784331343	0.583386070213873	0.365243282609257	0.714929811868087	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89924224623756	2.56493919553409
Merged-chr9-96143823-3	3.20269040625457	0	1.34894775566036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94265383-3	4.08487903776618	0	1.31945578648129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34743552-2	6.22230183032798	-1.01707704222954	0.713875264231529	-1.42472654984678	0.15423626136241	0.846098281983552	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34660667603772	1.60978507060531
Merged-chr18-64758762-2	3.31733432104724	0	1.34772178829557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88260554-5	9.58323867794809	0	1.32189357753434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150073296-2	3.87434822879504	0	1.32200552934387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-117190640-1	1.37923077450852	0	1.48758048993081	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90453552-1	1.91347829209819	0	1.40912673333901	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92848518-1	2.5608563252634	-0.545756367634392	0.860952304283479	-0.633898492307995	0.526147069591545	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77784887451712	1.9001726754443
Merged-chr10-41626413-1	1.27337424825978	0	1.60442607749607	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-137015575-1	1.8819178281144	0	1.40381188280239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17143488-1	1.14219239779816	0	1.89849882901571	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129603585-1	3.63909880371139	0.183539090562847	1.19164819447173	0.154021204760195	0.877593016101704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.872260231715655	1.03956264035389
Merged-chr18-57255199-1	1.20333309648098	0	1.48445541816202	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89416232-1	1.63989487827694	0	1.42239708169749	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66911919-1	1.42882055910841	0	1.72228633141693	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70300809-1	1.48207875827748	-2.51560555166891	1.60491125727536	-1.56744215000375	0.117011378233038	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3447636733827	0
Merged-chr2-45664441-1	1.80449433311533	0	1.52777041759625	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23495626-1	2.47501610580635	-0.581325007313943	1.23307155957543	-0.471444664179997	0.637323226989489	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	0.382164212378408
Merged-chrX-169794560-1	2.05864237718588	0	1.42341047105509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65781756-1	1.55051929652184	0	1.47057446574802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106443725-1	1.96709007255243	0	1.36381475428221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10922216-1	4.18787839977619	2.95194812825302	1.10322951455844	2.67573346189393	0.00745659196543898	0.0881041025764056	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	2.6842871404533
Merged-chr9-57580113-1	2.06124175302187	0	1.43458676635885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129780431-1	3.64685704638076	2.21228528666418	1.01007056943368	2.19022843909267	0.0285076737080757	0.246377786817605	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30118691799882	3.39205353263629
Merged-chr2-52602528-2	1.99408690003573	0	1.46201219199847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129611113-1	4.40067236374679	1.22952713789915	0.957682310709335	1.28385699949754	0.199191995315868	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31377946648193	2.80310538461141
Merged-chr16-35906036-1	3.90084471893024	-2.1184636347567	0.966440713177024	-2.19202648012683	0.0283775946474659	0.245419702960412	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87483117066726	0.683637474991079
Merged-chr13-59508766-1	2.09986235960024	0	1.38228229105949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65567374-1	2.8312037176319	0	1.3521915314605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147493404-2	1.88708269856373	0.142789618968254	1.38586023239194	0.103033203226998	0.91793661881386	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	0.563523181795778
Merged-chr17-35750535-1	5.121161158073	-1.40627744266178	0.930651041042847	-1.51106846781794	0.13077100749186	0.753426402359647	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67316095617183	0.825079211029734
Merged-chr17-16435316-1	2.85945116165716	-0.732663100527604	1.36199108208809	-0.537935314087629	0.5906217072183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82761405602449	1.1517642783294
Merged-chr9-120830687-1	0.949328567511811	0	1.78400840969178	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113032155-1	1.38565984272226	0	1.6101424938574	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-33176492-1	1.2932604458624	0	1.44402449827024	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25472135-1	1.60882552097388	0	1.51318426449134	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149783282-2	2.42116956422154	1.9445505292565	1.36790007224398	1.42155890529822	0.155154341801044	0.849636773596836	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.844015785373878
Merged-chr12-51844738-2	8.461420651117	1.8510585206559	0.608343592103873	3.04278461166044	0.00234400041200825	0.0366262675569324	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74548451505099	3.59670281116625
Merged-chr19-20994848-1	4.84002850925268	2.33794439792259	0.953576783020383	2.45176312967407	0.0142158207169472	0.144067465969236	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19197720480268	2.94612954451957
Merged-chr15-51407364-1	1.18123546424315	-3.17087625802185	1.77348749849644	-1.78793268106492	0.0737868694793042	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57232999641638	0
Merged-chrX-74062924-2	2.93289204305338	0	1.32570898279046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121848772-1	4.29925578461158	-0.569483327365928	0.976864721281651	-0.582970512660917	0.559913150813772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12921907483694	1.11779166918352
Merged-chrX-155212786-1	1.87079590685253	0	1.39203720651456	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42915238-1	2.20402039955436	0	1.43049970802908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-17490898-1	1.55671448358485	0	1.56800006556781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37789946-1	3.86940677823591	0.166985799239913	0.778284617617811	0.214556211776389	0.830113336732656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31917901007196	2.82905551530969
Merged-chr10-25313291-1	2.39198702616404	0.566300859408266	1.12441678495616	0.503639635217953	0.614514634858815	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.928670148753437	1.46402698790757
Merged-chr9-20857322-1	2.15015483152138	0	1.36406830466182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85698643-1	1.2533682301785	0	1.59341769506573	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52085242-2	3.52157339923372	0	1.31283850152779	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90810941-1	2.03235541843435	0	1.39086857058545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99550891-2	4.57286114926412	0	1.32210412146678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40299230-1	2.39031303018864	-0.53109564430661	1.41794794849089	-0.374552285132786	0.707993464704629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75689013802342	1.46928333126936
Merged-chr1-150761200-1	1.35876898870549	0	1.45907913881249	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109147760-1	2.54895406514092	0	1.38587697489223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49200210-2	2.8523300410083	0	1.43408396850643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184589507-1	1.86690401011029	0	1.42771710894385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145274887-1	4.9337898237776	1.23865288046743	0.728262917400439	1.70083200843021	0.0889745369098888	0.567398271583253	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09554825633248	3.77236700208554
Merged-chr13-28607831-1	1.9507830823433	0	1.45173792700506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166074331-1	2.13084871443356	0	1.51984702902604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15810729-2	3.01743380842316	0	1.39722564087517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-105835103-1	2.09881670146456	0	1.47144998786312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122029231-1	1.48689288914037	0	1.66413737893231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17506981-3	5.2079234469184	-2.08570193090493	0.762048160037076	-2.73696865930817	0.00620082002232711	0.0768586466576228	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62987343034339	1.26501898168246
Merged-chr14-70797665-2	5.2536981942809	-0.714294921729147	0.910055154951745	-0.784891902257311	0.432516950247016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63389745817477	1.07938469868934
Merged-chr1-95380700-1	1.22025257757906	0	1.69403176396046	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95067740-4	4.59969075207662	0	1.29657482158691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4225390-5	8.80795552343626	0.808971637852713	0.47790585043154	1.69274269633281	0.0905044544022155	0.57519004837261	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91373442302233	3.73113161366567
Merged-chr2-85007935-2	3.43885776969468	0	1.33593054339287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56771584-2	3.06460235049753	0	1.34030383092871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180919876-2	3.12667042726238	0	1.3510574727413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89091066-2	6.2003109626211	0.878690250920037	0.739631644654511	1.18801062295067	0.234829224527511	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59662761508517	2.47111615257247
Merged-chr5-32742295-3	5.95238983263031	-1.09033717332848	0.94843106268378	-1.14962195591016	0.250299611100685	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47916240245487	0.918668513615376
Merged-chr14-87443690-1	3.71061997866258	-4.47801145835784	1.09882597668991	-4.07526901743563	4.59611831601853e-05	0.00170450806905767	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19984045339067	0
Merged-chr5-96172031-1	3.12650379116974	0	1.35015408930093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57698488-1	3.82574195144896	0.104570982054195	0.643119803416449	0.162599536662815	0.870833751827445	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98015237842159	3.20119350150595
Merged-chr7-38084251-2	5.10847860582366	0.657991584159693	0.822354494672937	0.800131316144123	0.423634718807821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76726455210145	3.63821580913992
Merged-chrX-164962976-2	2.83148599656527	0	1.36359117988984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8196485-2	2.7686930442195	0	1.38671948812244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123626840-2	2.84156976400975	0	1.35209462724161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9082747-2	2.98223481891071	0	1.35737539222792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70971550-2	6.57089679977032	-0.203809702731657	0.804172276795419	-0.253440349304041	0.799927950929384	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76722684281275	2.8452237720862
Merged-chr2-163759993-1	4.22167503799247	0.699389671608068	0.949847473985567	0.73631787288271	0.461537271748673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34257673959279	1.99758327100279
Merged-chr9-115315589-1	2.79048844150993	-1.32006782548049	1.28948769935475	-1.02371494209758	0.305969935693351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.965778310220472	0.423054662900563
Merged-chr1-151927604-1	2.68275917195281	0	1.36359088358986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84983134-2	3.23571971906948	0	1.31771478086443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88632364-3	3.77000543901221	0	1.33279324676333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101966937-3	3.52629005455477	0	1.35098066198353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53249030-2	5.30463498920636	-1.99936993119448	0.828737525836223	-2.41254905065032	0.0158414057318845	0.156158168495357	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63964478597344	1.21653520045322
Merged-chr3-90005148-2	2.26904446823528	0	1.33807144798882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33667296-1	3.7655055944188	-1.22315630904416	1.05836394405552	-1.15570481771816	0.247801916892121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93139066828068	0.73596151290311
Merged-chr9-71616203-1	2.58356386117597	0	1.33555668407021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40296625-3	4.76703695670873	-0.7586208996644	1.02447636699412	-0.740496241890131	0.458998940678398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59098910307374	0.733321818366247
Merged-chr9-25559401-2	3.06025323411752	0	1.33653924963625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73964328-2	4.07672826195016	0	1.33943573559515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44306435-1	3.51044349314903	-2.51571420424199	1.0489462269556	-2.39832523307077	0.0164702340052776	0.16097276567587	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19199289295854	0.73596151290311
Merged-chr7-100979317-1	2.66945297986699	0	1.35331988280206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113634970-1	1.17864988716878	0	1.64444319844339	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95008385-1	3.03705632178635	0	1.33054046532328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170206492-1	3.26396976412783	0	1.3401698573909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46124535-1	3.2117087704602	-0.711167184193121	0.883477406310949	-0.804963634738179	0.420840665140954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70081179427784	2.14680093235515
Merged-chr13-107827834-1	2.44047365227549	0.099128309190124	1.15667126300414	0.0857013676752592	0.93170381488298	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75409117819183	1.47158896970822
Merged-chr6-137136284-1	2.14266187218757	4.50147480893501	1.19171336585926	3.77731335226682	0.000158529227266192	0.0045575234865537	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	3.21068215388718
Merged-chr4-8727239-1	1.48578621898554	0	1.54421899034635	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85529728-2	2.12158667329448	0	1.40463597910744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69205376-1	3.15187715881394	0	1.35209879954079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31169498-1	2.76619616575931	1.39212862484349	1.45317346573181	0.957992048211825	0.338066768302611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09274865947111	1.50521364448448
Merged-chr4-145361302-2	2.63088039668493	0	1.42950131436708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-56655178-1	3.24883369601676	0.377434196792153	1.00500212538402	0.375555620489791	0.707247289102892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84082143452086	2.00259395741298
Merged-chr10-87679688-1	1.76129919402739	0	1.59816276268873	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50027088-1	3.80024463294087	-0.330343863908531	1.09743193410765	-0.301015355614871	0.763402785180612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63029451511851	1.83514313210961
Merged-chr9-94615491-2	2.59977814390361	0	1.3767570928641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105534119-1	1.93360332160988	0	1.36943301293908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105757971-1	2.6144191929556	0	1.44868842149668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109063241-1	2.16931948488464	0	1.48976977185604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118649232-1	7.41467101630287	-1.41970527055754	0.680153791085852	-2.08732979094479	0.0368583336354833	0.297772562734555	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02655407836976	1.75733238011489
Merged-chrX-61664211-1	2.88443597897547	0	1.34178052255783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101685670-1	4.11594148844561	-3.27707106840639	1.14815973890453	-2.85419437502058	0.00431461238309429	0.0580965713549721	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93346164042086	0
Merged-chr18-64936223-2	2.41056709862281	-1.31809613373378	1.22463211223952	-1.07632008058594	0.281784130992687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.761354961697477	0
Merged-chr7-90142359-1	5.96436738587669	1.14034886628962	0.67202786502507	1.69687735529699	0.0897198500365837	0.5710922774684	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93209741673612	2.52863192190685
Merged-chr1-172346433-2	3.41116015949871	0	1.3316187775384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157313649-1	1.46688712022748	0	1.52392162685084	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121267097-1	2.90758758556223	0	1.36613612584068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114821451-1	2.93006071233206	0	1.34080359519811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140302778-1	5.08535389868813	1.35351925064996	1.34658809161607	1.00514720060057	0.314825974811004	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96434013447637	4.4042992837822
Merged-chr11-23565949-1	2.10178480379632	0	1.33566007533492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86452519-1	1.78138580469621	0	1.41857567140341	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-11230517-1	1.11359027904052	0	1.5729286570206	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90227418-1	1.94392188028246	0	1.37849633690736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77845594-2	5.68052666509271	0.440756961200706	0.691619074860838	0.637282829842991	0.52394063302726	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86777743437145	2.78602543656573
Merged-chr3-88244324-1	3.51742853595542	0	1.31241797830504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107782846-1	2.66135289953236	0	1.36282282712364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95799342-1	1.47372108303566	0	2.16579937919423	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80060062-1	4.69248219240137	-0.951134779787362	0.782365772226961	-1.21571624622587	0.224093033178241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83500348447334	2.02326711107977
Merged-chr13-4759834-1	2.25000057158971	2.29134381111997	1.14840864738076	1.99523385368612	0.0460173803724329	0.348805444590767	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.37544986530815
Merged-chr17-79092487-1	2.58452981445585	-0.17621228294673	0.878544361315825	-0.200573005423211	0.841032467655242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55536489166392	2.35422199170889
Merged-chr11-54966517-2	2.40405273441981	0	1.35820750705235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169008515-1	2.0081294301471	0	1.38663520553449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86110388-1	1.95830150445806	0	1.48941269229807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36074801-2	1.66546161512071	0	1.67342565077827	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63141038-1	2.11440600203712	0	1.43807084804923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69417117-1	2.71889494265678	1.91939159753685	1.40395280775495	1.36713398551204	0.171583312455359	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892597230197813	2.63718095058825
Merged-chr13-118190842-1	2.64430086905249	3.14385686446521	1.26490589281396	2.48544724340817	0.0129388763834828	0.134548665842627	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.792886178910224	3.05370079472873
Merged-chr18-35094155-2	6.39844341755336	0.617041642889609	0.59647945543079	1.03447258287206	0.300915287684255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9032012997026	3.49513901051627
Merged-chr12-3791336-1	2.18881250957854	0	1.33551709667468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26024244-1	2.9458555901381	-0.668521986587482	0.887278468025233	-0.753452282095129	0.45117817559752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76399289895805	1.56485155503272
Merged-chr14-44052717-1	1.91214467832613	0	1.4914938463216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148169847-1	1.97361844753326	0	1.37667770216552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-22108695-1	2.15710572678385	0	1.42736495884814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90634841-1	2.34475971988452	0	1.3452427983652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-63863952-1	1.53238005965428	0	1.46115553633863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3016040-1	2.59376349094589	0	1.37210101937938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7585110-1	1.98777754679309	-0.77880696113577	2.2564178744518	-0.34515191975466	0.729980162612629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	0.469435083901436
Merged-chr10-127480951-1	5.72462441701042	0.609435124646731	0.749739456757277	0.812862547320932	0.416296869729268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01833547959313	2.18210741161866
Merged-chr2-30469953-2	3.13152631778526	0	1.34143740284949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5123870-3	4.5293113514038	0	1.33330290348916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96575637-3	11.7304695407978	0.859333143068054	0.515943351756025	1.66555715883012	0.0958016500514302	0.600331283492593	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28708316974158	4.34631678286037
Merged-chr14-87464341-6	14.8897038579758	1.56291747800605	0.48873055613984	3.19791234325617	0.00138426350826451	0.0243948444474253	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57423578193587	4.80208123259411
Merged-chr2-129898337-2	2.79234198854148	0	1.33644844293652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83271627-2	3.21896674835489	-0.220725069585198	0.947108227835194	-0.233051580693908	0.815721352687591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8423372851399	1.34805514843284
Merged-chrX-71376292-2	2.78402455407687	0	1.3542253103247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90549149-2	6.91844087624835	0.519356916623641	0.601425065035865	0.863543850791569	0.387838520526863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94858933549472	3.9362504161967
Merged-chr5-95925667-1	1.7623669319755	0	1.38479343413841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162612742-2	4.94151834035584	-2.11064688404798	0.781536799811639	-2.70063659773497	0.00692069111596221	0.0834698194285099	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62697029883908	1.26501898168246
Merged-chr13-30696521-1	3.1136518223968	0	1.34106270185129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136605504-1	2.56350513009346	0	1.36748351196417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75298020-1	2.08003567605914	0	1.35804821009121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115479512-2	2.20724112579947	0	1.38621844866271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-28188186-2	3.6998400786443	0	1.3358004432944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61020169-1	3.45330842482491	0	1.36050422633752	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20576343-1	2.4640801194893	0	1.39116300538947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43407668-1	1.70053655244778	2.86473322843996	1.25572138303399	2.28134462560347	0.0225280619926955	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.04220233489076
Merged-chr2-150914298-1	4.63659809222548	0	1.31618000469031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92666847-2	3.58155005922316	2.03959731881666	1.18758050730616	1.71743920203201	0.0858989540955975	0.552970282558989	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.07982873328226
Merged-chr11-54072801-3	3.47224251022941	0	1.33877306517378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76227544-2	2.75943224797313	0	1.37451427284697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84449707-2	2.51373082361331	0	1.36829295201783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186932135-2	2.17152794705847	0	1.47176100856907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34871659-1	2.23470320169626	0	1.43251297642704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154305630-4	6.39797249427908	0	1.31745963673049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13559018-2	2.79807689935253	0	1.31598156289764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3676605-2	4.34473492856007	0	1.31302317058651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90077012-2	3.71776771606542	0	1.30726554676581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57079780-2	2.77835474627282	0	1.58996424252767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94094365-3	3.47361593487885	0	1.31306335333078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65517277-2	5.96489836814081	-1.05085508337701	0.87197963652859	-1.20513718366238	0.228150347339741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23443708695261	1.43750690265746
Merged-chr11-100841013-5	8.05341608399062	-0.775558854189551	0.648336346501568	-1.19622917699197	0.231607137834845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79881695788549	1.47158896970822
Merged-chr6-55511799-3	8.71931905359892	2.48257233965625	0.55548808975731	4.46917294075715	7.85226249237804e-06	0.000416150806834497	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84968058220486	4.53929296090467
Merged-chr1-85122017-2	2.40702175121037	0	1.36111974931201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134967802-2	3.26583071537961	0	1.34933464116577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78178562-4	3.95079447569377	0	1.3105040554562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128424277-2	8.11178575780013	-1.05224040999042	0.601203276954107	-1.75022400962518	0.0800796674037533	0.525337410517585	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10076820787809	2.15258675016244
Merged-chr5-137820966-3	4.23345953728866	0	1.34259527869965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31926792-1	2.26266255482144	0	1.40352856266418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35166312-3	3.23574192426516	0	1.32198885963061	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42387853-2	2.51819263423783	0	1.41805919190729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23144362-1	2.30943421418515	0	1.35288317221353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92880966-1	3.01774500012705	0	1.34762461525631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65681129-1	2.77710184164503	0	1.33299787064161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136608567-1	1.54221937814471	0	1.49754280506593	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41329020-1	2.66410726250546	0	1.45190850630771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120379413-1	2.69333321319785	5.03144694578193	1.86463607081598	2.6983533272421	0.00696834373571557	0.0838424515150392	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.93999571227277
Merged-chr1-106632139-1	1.77521805970211	0	1.43103748211021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94565565-1	1.65147366802918	0	1.42298874845406	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75541836-1	2.20549548408136	0	1.37399672197798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95229798-2	4.18896357510929	3.76248221240128	1.12949478634234	3.33111959249088	0.000864974328769668	0.0169839580792616	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.659012160579651	3.02133452738648
Merged-chr18-4248481-1	1.81030217909036	0	1.54409166030913	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81261761-1	2.26475539056073	0	1.41996409212383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15535999-2	5.53301261862096	0	1.30487116483475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86585811-1	2.43786224746513	0	1.39624192620284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25243280-1	1.57682212197806	0	1.408520117066	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53207512-1	1.31173762210104	0	1.53339540927581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180885884-1	1.27803466488683	0	1.44113407447326	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3771526-1	4.80386577643959	4.65401750230303	1.00295587401	4.64030135612588	3.47901459274374e-06	0.000218385867029234	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.87613034754277
Merged-chr8-82960413-1	1.29788092841814	-1.37485561485869	1.41125687922272	-0.974206492878832	0.329954021468612	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11158061552314	1.15307255889252
Merged-chr4-139234846-1	3.96772881951403	0.0378256156878742	0.856837534453781	0.044145610068293	0.964788336623585	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0382165126342	2.00098049458557
Merged-chr3-81264854-1	3.81729840515765	1.67856816323007	0.647034472853727	2.59424842671332	0.00947979617258562	0.10640102382236	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88606928228114	3.65707512103572
Merged-chr5-18038452-1	1.9306864868261	0	1.37180041158241	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121572000-1	1.57783890432856	0	1.46705751633447	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124667661-1	6.95645471301697	1.2373840109222	0.625677757149638	1.97766980971047	0.0479659682223733	0.360108474202574	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4580642838108	3.80425001585269
Merged-chr10-95662011-2	2.01763638753461	0	1.5475413341339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98945608-2	6.24378188715613	-0.470435715798818	0.732151361688601	-0.642538879821007	0.520523353391379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0099455139469	1.98465223817743
Merged-chr2-13237805-1	1.92838617408854	0	1.44607273879075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73637752-2	2.96618351059332	0	1.33999825679268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46153097-1	3.54045700016682	0.379532721724083	0.650007822127504	0.583889468409557	0.559294679186847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93430071576803	3.31324941431418
Merged-chr12-76580846-1	1.89280615330145	0	1.51793169628466	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-150689377-1	3.15280401315541	5.08441394882821	1.31400598469569	3.86939938481764	0.000109103794150641	0.00339338245243588	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	3.22077570854077
Merged-chr3-95065761-1	1.90811378200817	0	1.3944833891738	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115511791-1	2.78990686222137	0	1.34823576012959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96712906-1	1.76789800180134	0	1.4863970328644	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126197642-3	3.7013154478901	0	1.31751368663051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40359088-1	1.28090615278891	0	1.8506907877524	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-74988241-1	2.24713981276247	0	1.35514438449798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36534934-1	1.36904055856924	0	1.66308651313429	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95053892-2	3.52678723858833	0	1.31554051601323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45009491-2	5.61232381940379	2.39438790128283	0.723308635781276	3.3103267164736	0.000931871310064213	0.0180533835242977	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85991683129457	4.01285831174562
Merged-chr14-61669043-1	1.9932586745442	0	1.36994390520064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118237144-1	2.56520341487796	0	1.38212113743999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7927442-1	1.37578123713968	0	1.57326151271423	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143470162-1	3.07005295193755	0	1.3669117245203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118157245-1	3.00414641536528	0	1.31920303728338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135382522-2	2.56682677650592	0	1.40917681522085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107559368-1	1.73576223500975	0	1.35640556343469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-81398796-1	3.29113347116875	-3.05775078763152	1.16473435048819	-2.62527741742131	0.00865783947675143	0.0991335515065356	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30885176654003	0.420961122473315
Merged-chr2-21117354-1	1.64227667676747	0	1.44581981143725	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103676768-1	1.76781208888607	0	1.40527844151239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-103778231-1	2.86667120720134	1.41320857571727	1.25964714278148	1.12190829298171	0.261901434262464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860429154817231	1.40590822918039
Merged-chr1-194984281-1	2.18964281192261	0	1.43572561673512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129518197-3	4.54378664574471	0	1.3063767015724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156465000-2	7.65439079132505	0.167758046381105	0.847880983709843	0.197855653805433	0.84315800133314	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2642471533917	2.46442189296888
Merged-chr2-48988229-3	3.77093374685556	0	1.33330040943194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67070022-3	6.68077941192663	0	1.29404206691445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-62638817-2	2.7723579948592	0	1.35741628024939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135889502-1	2.73439542059195	0	1.35086492009354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84763756-3	5.28582008297457	0	1.38365821656827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191446167-3	5.13437800301215	-4.78152888774	1.06015680933565	-4.51020909891279	6.47637566942252e-06	0.000357739006334813	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57197332495471	0
Merged-chr6-85141226-1	2.9984054749119	0	1.33950939151638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76611666-3	5.51385938891252	-3.00410938890474	1.06932715659344	-2.8093454565158	0.00496423466679933	0.0648008147296582	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66968519572193	0
Merged-chr9-40241554-2	3.41106880151461	0	1.34164270277018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55365666-2	2.9528063046829	0	1.33246474384743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44292470-4	7.8732613436881	0.03401957826513	0.538059885409906	0.063226379047405	0.949586239356422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01819553980771	2.90870545105247
Merged-chr3-116601168-5	6.26385148724703	-0.261119427966341	0.626231056151289	-0.416969783598944	0.676700509431913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55446861146939	2.31742847155177
Merged-chr10-62594097-1	3.66803421015931	0	1.32743809882277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57749374-1	3.50133440440105	0	1.32223899236029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122806067-3	3.81532690243243	0	1.32797815240424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21826052-3	3.60967873575232	0	1.3359827325741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67882264-1	3.68663053601614	-3.9014017538471	1.12065132770473	-3.48136985822144	0.000498856134131785	0.0109610803433005	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30795240054759	0.423054662900563
Merged-chr9-66877226-1	2.64181033777531	0	1.36077772582982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72539424-1	3.13913113242083	-2.97459041161437	1.17956115327131	-2.52177719091956	0.0116763640406799	0.124755344114171	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76777147650534	0
Merged-chr1-172619423-2	3.92739296462103	0.226683953299819	1.30755959674078	0.173364146356962	0.86236520540515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.306240821987646
Merged-chr10-51497315-1	4.39059560605131	0	1.33932686715085	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-98367623-2	3.14091223181767	0	1.3686575737188	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32138816-2	2.97018121047937	0	1.34013836618808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60760510-1	5.32655782233309	3.34837047980809	0.946690683210308	3.53692133998138	0.000404820214698862	0.00938063182613896	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	2.83504774294774
Merged-chr15-91301563-3	3.23178781117844	0	1.33140652416193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169987461-1	1.43551309216492	0	2.43502254984943	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167219546-3	3.13946361619615	0	1.31851373749937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45590007-2	3.36373215315114	0	1.3244218636773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76801431-2	4.64517648350953	-4.06848534736652	1.10217463979846	-3.69132549457903	0.00022308843008104	0.0059477505312426	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49070915914592	0.382164212378408
Merged-chr1-162164010-2	4.05372250774816	-4.5572683694784	1.16219906554879	-3.92124594191309	8.80922946666838e-05	0.00285965180689971	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16691463810337	0
Merged-chr11-6411887-4	4.1156255449036	2.88441233620546	1.15670351475755	2.49364880404124	0.0126437574998637	0.13238567178114	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.825079211029734
Merged-chr1-65112206-3	3.69119566457156	0	1.31128465384151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123714842-2	3.33486882396616	0	1.32341045867896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142711299-2	3.16666639225951	0	1.31439428512001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107785415-4	4.44029477845106	0.0342708792901816	1.03541071983815	0.033098826034502	0.973595778927147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994303173147804	0.733321818366247
Merged-chr2-72235126-3	6.85819883018889	-0.566498927138196	0.598177567420113	-0.947041410431782	0.343617677999114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25237910694594	2.31260716574699
Merged-chr4-125962849-3	4.73594991624234	0	1.33192843506098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37322965-1	2.23710618753956	0	1.42990707990251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70281210-1	1.40719223605546	0	1.4707580684027	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-27457489-1	2.28732281180678	0	1.35523993112757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36992929-1	2.20129286233257	0	1.39539416715577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50841913-1	2.04945726542064	0	1.44125058903091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107228041-1	1.1772903230623	0	1.51548155954006	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-112431306-1	3.02658020237431	-0.481494598362478	1.3066600727457	-0.368492623602333	0.712505944323113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03062457639696	0.581381506691384
Merged-chr2-128775143-1	5.39052837420377	1.92406736038251	0.760596537880904	2.52968198585698	0.0114165951160785	0.122610173021288	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59678023126281	3.73785777016281
Merged-chr11-48808406-1	2.15914756349851	0	1.39661298752654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-114249332-1	1.35690069182617	1.77940359908325	1.52398038019881	1.16760269502362	0.242967062611095	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr8-88653503-1	3.01845244139118	3.55685049540155	1.19638433705759	2.97299988409188	0.00294904562726943	0.0438771255827751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.69686753743604
Merged-chr13-30788647-2	3.34158002607619	0	1.35731754682774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-13117425-1	2.72388830048884	0	1.41339160853675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65951267-1	1.72070452841551	0	1.47801615336736	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165438470-1	1.63407914735537	0	1.53624096611194	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102050748-1	2.06026873491363	0	1.35794955127922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-42946125-1	2.75490870776237	0	1.38636639045122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137927081-2	3.64231917528002	0	1.32707472380897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39543983-1	4.97481782178452	1.03111735810082	0.710935247658932	1.45036747227857	0.146956072781633	0.816719810511023	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90446766370842	3.20749095265581
Merged-chr9-114723544-2	2.30714534296337	0	1.37365012383999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103484314-1	1.88471284207989	0	1.57237406713529	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36745023-1	3.26507325351336	-3.2832952641679	1.172695596361	-2.79978476456833	0.00511366905905438	0.0663406429090664	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94040936763345	0
Merged-chr4-139487342-1	2.10482375833244	-0.623607251572455	1.091620245102	-0.571267576220324	0.567818277003715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25787152852412	1.486851288245
Merged-chr18-61091580-1	1.7733125788733	0	1.49019605451648	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-74425807-1	2.83442141945673	0	1.36133879777279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67051310-1	1.08612132903802	0	1.51188240959553	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102351120-2	2.95177044022073	-0.829974067474752	1.03431282617405	-0.802440080478216	0.422298436122149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03674010525236	1.15658857927843
Merged-chr10-93189594-1	3.70544322987304	-3.18103799855412	1.19142872930716	-2.66993561621095	0.00758657925977762	0.0892283312291987	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20701104096888	0.609949614787909
Merged-chr5-150375391-1	5.05573874161295	2.57542026335067	0.86112540352783	2.99076098881739	0.00278283212502809	0.0419098750961248	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37340271540269	3.57568469721097
Merged-chr1-184502731-1	2.05453186749121	0	1.35941268475962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122600987-1	1.83619783532049	0	1.38687397666232	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148820607-2	3.93155419707241	0	1.32010198093371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-30447757-1	4.24178165353675	0	1.33227928786887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45757252-1	3.90781613761756	-0.197897271373964	0.692763616516962	-0.285663488462256	0.775135871828262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63646117377706	2.50724812564465
Merged-chr9-14805754-1	1.64594425640003	0	1.796360244697	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80296141-1	2.71581770662806	0	1.38440908253457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-1253116-1	1.73321898675363	0	1.41320661124493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131490364-1	1.712600083884	0	1.45502638855601	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-37360395-1	4.56994929901739	0.171857979934386	0.577851562539887	0.297408523356763	0.766154637230716	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99964899536052	3.11431153618456
Merged-chr4-19952198-1	3.65493033406218	0.5681860421754	0.986985534273057	0.575678186199441	0.564832722396117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19867857347571	1.58756080918295
Merged-chr14-31472561-1	1.2661998900781	0	1.52711506198275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79537140-1	1.32095077789271	0	1.48044356022687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45205901-1	0.935665312005419	0	1.89527385245616	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118619998-1	2.55000338017518	-1.20796365380898	1.20026775600459	-1.00641181750146	0.314217511298347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06643065126408	1.57403368136583
Merged-chr14-90618173-1	4.99626398033458	4.39366348471966	1.09842541816352	3.9999652339305	6.33517898151604e-05	0.00220951692671176	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	3.91365221224915
Merged-chr5-105004538-1	2.17728210940158	0	1.42037973862412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137159587-1	3.37066352213137	-0.505268855660837	0.997551621779642	-0.506508981218869	0.612499386398898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60860434765845	1.20539659680455
Merged-chr11-11740700-1	2.02896670230497	0.0988400585207335	1.41852345067413	0.0696781279673319	0.944449850815235	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr10-44752326-1	1.85718448704581	0	1.47910454231029	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185913998-1	2.75077314062497	-0.525936798646943	1.80643208174523	-0.291146732812021	0.770939099631292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789210977348248	1.10459859746439
Merged-chr6-50679332-1	1.88136283558938	0	1.40707535984155	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38782884-2	2.43091148576674	0	1.38341541608038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-3601415-2	3.96588455656979	0	1.32715449488127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128724942-3	4.00300696931381	0	1.30722378017063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64108497-3	8.31415271626199	2.59078607827391	0.853934482469789	3.0339401106988	0.00241382343117452	0.037502069884339	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.873092966476886	2.84060451162803
Merged-chr6-125433888-2	3.8027330902797	0	1.33814796671866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14104314-3	5.51469021637786	1.30314612029264	1.06660621018017	1.22176873512906	0.221795094865313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	0.845523456341755
Merged-chr17-51294758-3	6.62635730532191	0.256810434102672	0.731430947111767	0.351106874978083	0.725508170402936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46514894394149	2.57804496846817
Merged-chr10-71362628-1	3.27754576811567	0	1.34889546753826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24856695-2	3.20459252992824	0	1.33474762425884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13832169-2	5.76150362588031	-0.360135399971181	0.730389814277808	-0.493072867297957	0.621961101536039	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33381917827239	2.939741729574
Merged-chr11-30781084-4	4.26003568289698	0	1.30773876751235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116106991-3	6.86112352026642	-1.40145234169902	0.661454795374404	-2.11874243183278	0.0341122402723618	0.281959245103966	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27258400505008	1.65013357957091
Merged-chr9-15015762-4	4.25767153770898	0	1.31145066803075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141731812-6	20.0259158781822	1.59225511411011	0.362875940160194	4.38787733738201	1.14462296366954e-05	0.000564502129690186	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64216818495462	5.13892783978139
Merged-chr19-32911484-2	2.3509418033654	0	1.41084572934868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42848256-2	3.39441775739316	-3.50406243051286	1.20285581595506	-2.91311924840357	0.00357837923127238	0.0504706564672278	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13743542254524	0
Merged-chr18-75218980-1	4.94452156087014	0.838410896167553	0.842192887570378	0.995509352478937	0.319488597876064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9031773132412	2.48366051229539
Merged-chr1-91347074-2	3.41894210800095	0	1.34794495981223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146272491-1	3.03077073220389	0	1.31966493992028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125580232-2	4.02825281567518	-0.7049706413949	0.865069885811063	-0.814929120707908	0.4151128831042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10468960789412	1.40000983364339
Merged-chr8-84928844-3	4.08335972504096	0	1.31243766506972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26965014-2	2.28026079547189	0	1.49082251362154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29640716-2	4.62338621221171	0	1.31452193767016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-46347564-2	3.31416435524139	1.61615334559426	1.0821878304088	1.49341297340569	0.135329119075246	0.770945421324773	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	1.41695929335733
Merged-chr7-34378799-2	3.38612904686449	0	1.33409675684025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72871473-2	6.45070964023769	0.175922905135543	0.650347041215711	0.270506197439887	0.786770849722977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49566456167578	3.09454312602522
Merged-chr1-191439846-2	2.94602660566902	0	1.39539374616917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86201933-1	5.82603911438093	-3.98528340742463	1.11634695608469	-3.56993261432094	0.000357073069536056	0.00852202220668485	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5189572650851	0.423054662900563
Merged-chrX-135620450-2	3.2874241343908	0	1.33958728469294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-33017538-3	7.27815866348064	-3.18969631978286	0.877868853403473	-3.63345425392016	0.000279652047121283	0.00705837878377265	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56834005867698	1.15025660736152
Merged-chr7-80642095-3	7.34070911625923	1.13450100353377	0.754102998575455	1.50443773022639	0.132468695490824	0.76033877064278	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30878157063233	1.62042974503458
Merged-chr6-116345346-2	3.50160668523729	0	1.33355747208064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12006832-2	3.87322136067721	0	1.33898590538462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-27206393-2	3.37032996879925	0	1.34568613342567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10522976-1	2.60445145821937	0	1.34900292996602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-6005001-1	2.6886439231629	0	1.35048522035773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74853860-1	2.61363966333885	0	1.40652042808354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65195700-1	2.98973204697204	0	1.37395422641441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141569140-1	4.70472264015091	-1.80956714815991	0.821319714809175	-2.20324328703146	0.0275776058443272	0.240214107105226	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66819254228875	0.926147595614233
Merged-chr16-77315442-3	4.93003207417372	0	1.30620941901175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61224008-2	3.5868358246203	0.106237924480336	1.34295879406858	0.0791073597712417	0.936947229610717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr12-4189245-4	4.16585690582663	0	1.31835701809478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5753229-2	2.75434675234016	0	1.41794530853936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79286246-2	6.66936840818578	0.135222936825057	0.823937133760024	0.164118027073218	0.869638230678353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55545340786398	2.3060951186802
Merged-chr18-61747005-3	4.37157461856902	0	1.31081478996235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101146313-2	2.9546829155903	0	1.353253393947	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97338050-2	4.29687380763045	0	1.31195774134898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76622790-2	3.73123458186016	0	1.30788891684773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-110668143-3	4.55084782763098	0	1.31681029190718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140755684-1	0.655810017660702	0	1.83917315669314	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24592437-1	1.36692175671847	0	1.49298982252757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135641962-1	2.20816323711531	0	1.48401072964134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39461778-1	3.54602859057832	0.846307626359106	1.0292327408183	0.822270408621325	0.410923014343291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752351597074039	0.843323834477631
Merged-chr4-10915429-1	1.94445007049163	-0.856299270073369	1.37058693948348	-0.624768298460566	0.532123139910712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	0
Merged-chr4-129494877-1	1.71556327350194	0	1.4276355252169	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170329310-1	2.38265543489761	0	1.35838919198898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99500407-1	6.07795945029106	0.36891281658884	0.674143476559948	0.547231901540227	0.584219421866073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35782228811052	2.97817938885471
Merged-chr17-13681098-1	2.60369518670681	-1.52116849977208	1.24046491286232	-1.22628901793122	0.220089932585479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	0
Merged-chr16-91995774-1	1.92417278755084	0	1.53391925234667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25031376-1	2.23649810040699	2.65967458683007	1.21277887241875	2.19304165608167	0.0283043779705375	0.244944760013607	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.29358708977899
Merged-chr12-73675539-1	2.36702017523282	0	1.37548217094141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66909429-1	1.67317555620257	0	1.41317513328096	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153704941-1	2.18472344506702	0	1.4474223195002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83108799-2	5.30645117565158	0.0266757468362375	0.605002213738294	0.044091982195253	0.964831083852196	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49166286716719	2.87793383052892
Merged-chr12-111505108-1	2.37143983496194	0	1.43598723380949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49745175-1	2.17650263792852	0	1.37480558478109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85523868-2	2.53291334820972	0	1.36588099644851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101604640-3	3.54054717505959	0	1.35692957676372	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64337680-1	2.1970398453739	-1.64217628709171	1.4837520188901	-1.10677273977367	0.268392197040085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1029353121912	1.19133112147929
Merged-chr1-156655248-1	2.35133148537575	-1.17101295847844	1.20698073673114	-0.970200205224394	0.331946708460806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97905059145765	1.53854069364522
Merged-chr16-31526822-1	1.45903266217485	0	1.78105441798299	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71526839-1	4.18662792782279	-0.108129827032206	0.984365873490648	-0.109847191927497	0.912530563726715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28156763876582	2.24621868818842
Merged-chr5-73571893-1	1.7796234553125	0.499900464692902	1.50101526840821	0.333041558746456	0.73910291274064	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1656270641644	1.98088044523647
Merged-chr4-145201010-3	3.83481277138643	0	1.32052419541006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111051479-1	3.44190303392307	5.2089700542736	1.08568997289424	4.79784301625952	1.60383397738918e-06	0.000118022674646929	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.51992777837383
Merged-chr17-10312183-1	2.26300433591128	0	1.34772846157215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43872416-1	5.93244678059317	1.55043058986449	0.733097365086283	2.11490405463673	0.0344381255511087	0.283674997133839	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04706745745633	3.02134852814165
Merged-chr13-112813880-1	3.60980519263649	-0.813706693850522	0.850661053953625	-0.956558067480167	0.338790362298761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24026671845835	1.60308582214967
Merged-chr6-84049091-2	1.91331409949824	0	1.48147507526847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76586128-1	1.88274032442748	0	1.36435445611143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41322194-1	3.88003147667523	-2.40927756508623	1.03012931266027	-2.33881080314505	0.0193452273685061	0.182731024518993	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26603961439555	0.469435083901436
Merged-chr2-61454577-1	2.15159885542687	0	1.37431366224373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-98232943-1	1.4676973457767	0	1.42478238493114	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79713507-1	6.61935505897442	0	1.32983963842368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58289454-1	1.66596652516869	0	1.40977453366892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52833343-1	1.6753122426931	0	1.58378678179231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96736849-1	2.51524514838538	0	1.39149928872664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93762799-1	1.23655302885943	-2.64476348346521	1.3088566011792	-2.02066710828554	0.0433142368997149	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99599050815267	0.420961122473315
Merged-chr7-101615731-1	4.56554462783785	0.836251286554442	0.830971078920767	1.00635426161947	0.314245187186568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10500733051284	1.84001395625789
Merged-chr6-137724059-2	3.04943311419324	0	1.32220566314914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-95831616-1	3.71857758845209	3.14856279602238	1.13680624886871	2.76965648205723	0.00561154416075133	0.0711194656183973	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	2.31898885959138
Merged-chr16-45110967-1	3.74287834727131	0.467067448928608	0.677129980930566	0.689775171801914	0.49033558452046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67602502002565	3.20604946077159
Merged-chr6-24961504-1	1.67421265195918	0	1.38823688661845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32581628-1	3.10773045852866	0	1.35737456283616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-45819599-1	1.80730069078014	0	1.37939736992451	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-111045679-1	1.20819537767291	0	1.47255293705989	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36031452-1	1.60479165982763	0	1.63090860805234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105953645-2	2.15205046147661	0	1.37967454447804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32238276-1	8.71252874332701	3.94122430636028	0.825189693554807	4.77614339726181	1.78688992892206e-06	0.000128033014578225	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	3.94329641859423
Merged-chr6-28822324-3	2.72329265746705	0	1.36426728876208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65355649-1	3.33319540928179	-1.36233121966336	0.836839464217108	-1.62794810464378	0.103535890093362	0.6379628183049	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11825254816347	1.80375881310702
Merged-chr17-55207114-1	3.29078842119278	2.08402019880957	1.12274851709598	1.85617720003758	0.0634283047913813	0.441921953822113	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.741231840258805	2.30095837608674
Merged-chr2-165062662-1	1.72681428438754	0	1.593589376432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83582239-1	2.74274005522312	0	1.32406926187023	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-86464937-1	3.58580541585709	3.81035610293932	1.14805963827862	3.31895310652371	0.000903556014583052	0.0175882547896765	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.88639437725876
Merged-chr2-163858698-1	1.66952692159381	0	1.40673293143291	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99688997-1	2.09413720692103	0	1.4189613798532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40064682-1	1.32584491937517	0	1.66205483578632	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84404881-1	1.45593615725443	-3.28777141910987	1.64338494180568	-2.00060943451108	0.0454344960731952	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.014875623029	0
Merged-chr5-9187925-1	1.39281956231616	0	1.54863657435281	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145825854-1	2.6617276217035	0	1.3416362885751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69418705-1	1.5991754001416	0	1.82417318382448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25765892-1	2.24381123079333	0	1.50383229512903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93785986-1	1.68909497348453	0	1.48528158033081	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36533464-2	5.61640279088207	0	1.29861554973607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13665875-2	3.56995922347917	0	1.34519067552243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44355076-2	3.55775461880423	0	1.35115416628282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111693400-2	3.76493896051857	0	1.32496449178034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81118972-2	7.13197922896132	-0.13722439932769	0.785200881656902	-0.174763430013125	0.861265524668171	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06371813127086	1.52944205045577
Merged-chr4-116656237-2	3.40781406725207	0	1.33909556275313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-95397362-3	3.33049521553254	0	1.31831254200997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127225805-4	14.1470286241232	-0.220000046286786	0.472594910298059	-0.465515056326009	0.641562657284331	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.13112651273368	3.65255683846504
Merged-chr15-64092001-2	2.698422151554	0	1.40638454615946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67950946-2	2.78842974017567	0	1.32351778062653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83867183-1	2.31780600584493	0	1.36804253250769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65303784-1	2.24541230532622	0	1.36421178792645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118858747-1	3.17875821662345	0	1.3592055531813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136513834-3	5.83558158020604	-0.0830610576129069	0.868937940386763	-0.0955891712772222	0.923846865884459	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77209807114601	1.29915063860089
Merged-chr7-98071665-5	9.67706953896238	1.713834274999	0.481406219230898	3.56005844240453	0.000370772268837369	0.008740434588545	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68412076542664	4.2169707692077
Merged-chr1-24472159-2	5.07704444683802	1.37514028648894	0.719116127923382	1.91226456074623	0.0558422689713223	0.40218989399317	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71360932709472	3.17544994694631
Merged-chr11-74664501-1	2.23941512794004	0	1.46975893361846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21369608-2	10.8679431189282	1.38654071337409	0.543167254113384	2.55269569892858	0.0106892840579839	0.116747778046635	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85100755394072	4.05755118075239
Merged-chr14-63413091-3	3.15774039370704	0	1.34079874976308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55818427-2	4.44604642353556	0	1.32032350065905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106354595-2	5.23858813633752	1.23298089307906	0.660504880758688	1.86672487819136	0.0619400177173554	0.433858489930995	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1488969311752	3.58881652880072
Merged-chr11-83739406-2	3.22861314340012	0	1.32121950164135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86204535-2	5.84126554793831	0	1.31165203483229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-23601723-1	1.62776684253593	0	1.45058139166869	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59848231-2	5.75923857270515	0.794531938582969	0.916138065728029	0.867262226410794	0.385798348350399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3585664518969	2.09927897987273
Merged-chr16-13294375-2	2.79438778027752	0	1.34374482731156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30580552-2	4.86005384302061	1.8805345780713	0.958443431651001	1.96207153804781	0.049754156065328	0.369416552919546	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	1.84016081186083
Merged-chr14-43984065-2	3.16288114017417	0	1.32717689093801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36010744-2	5.1860158122188	1.31586231063701	1.00637971556694	1.30752070047012	0.191035929224244	0.985663942446699	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56941063795302	3.11739424870847
Merged-chr8-18946102-5	9.13520998246335	-0.0745633034835732	0.559017242636249	-0.133382832937215	0.893890621422979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96964530209329	2.86487465827321
Merged-chr13-76255330-3	7.10235746395758	0.222730595026042	0.756499660248241	0.294422597563302	0.768435001383294	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53361742457082	4.18631306001322
Merged-chr4-149049042-2	5.79059638521916	-1.76638399601244	0.719776672258898	-2.45407230338397	0.0141248577799207	0.143212250812521	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45181020691616	1.41695929335733
Merged-chr3-79846796-2	6.89205316147883	1.20029091310761	0.706161779301861	1.69973927829154	0.0891799776586079	0.568486471571495	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46216077565809	2.4073789078553
Merged-chr1-60668482-1	3.48002396121523	3.5183634745343	1.02492544894497	3.43279940814817	0.000597383888571353	0.0126181863959233	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	2.88854826306555
Merged-chr6-87876378-1	2.93681788113716	0	1.3323574147314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129346739-3	3.49629070304472	0	1.33877473855025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21811493-4	4.37107486574669	3.19979183647972	1.1169909967	2.86465320305454	0.00417466159585147	0.0567260062285323	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.898163539755574
Merged-chr11-119503879-2	2.77701917200846	0	1.36911052672106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44696276-3	3.37659783785258	0	1.36945904649233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116632298-3	3.8126774642852	0	1.31932269020582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121877272-3	3.58309412037003	0	1.34678414883409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34779518-3	7.20418812721497	-0.320251230825189	0.680788120025394	-0.47041248430311	0.638060346459326	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79998841570514	1.77720628303105
Merged-chr7-109486487-2	2.90133521437114	0	1.33432326968782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134202242-3	4.12823340586077	0	1.31899121954172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21355756-1	2.59190188709706	0	1.3583462269408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100458778-1	3.76963341914287	3.56392997205707	0.910582018973606	3.91390330337763	9.08160156281618e-05	0.00292939116305422	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	3.85674041723695
Merged-chr11-67637303-2	6.46707872841092	-0.26218093622191	0.605083252010607	-0.433297294794922	0.664798803176925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23849471850938	2.54204578080207
Merged-chr4-135411829-1	2.91710843029987	0	1.35396511759289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122731523-1	3.31524400858211	0	1.31158987292929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134541096-1	2.20908548721039	0	1.40464446116941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-14988068-1	1.44657913730341	0	1.57835667844118	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115077957-1	2.32324387980608	0	1.492073305732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114792065-1	1.49462882290766	0	1.41965259018384	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73517374-1	2.16914266320558	0	1.34346708929024	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139350791-2	2.06934041098362	0	1.5096558996638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112449774-1	2.30096547238885	0	1.34281867452624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-50609680-1	2.11564390651874	0	1.35352733197375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69523520-1	4.35589844376041	0.608225041283631	0.809003511978129	0.75182002584443	0.45215929733647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59398449570583	3.49120428477706
Merged-chr14-48465146-1	3.3299380459108	2.18960550684044	0.966978325197051	2.26437909701259	0.0235508084791131	0.212856311324498	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	2.1552264446993
Merged-chr10-44702948-1	2.41108108808315	0	1.44064543783828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169982153-1	1.14995993208916	0	1.79869554475294	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95745665-1	2.05764501884287	0	1.36853764943993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-87108390-2	2.68702167883547	-0.57753764558387	1.27000014886086	-0.454753998337635	0.649286228333744	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	0.423054662900563
Merged-chr10-4110610-1	4.35119377891302	1.32160932553882	0.791274907096859	1.67022777252943	0.0948743071667254	0.59589162592434	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45845812415538	3.12818198236926
Merged-chr10-115351157-1	2.8009033708142	0	1.35162554459225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120834554-1	2.82399178480052	0	1.33098046782272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109003392-1	1.69306805708806	0	1.35869941476774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63147272-1	1.22486890135457	0	1.59039572672417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80984423-1	1.20478108074551	0	2.41281683761804	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-38709967-1	2.20203429533527	-2.0680646714338	1.59232631134119	-1.29876938960577	0.194023082563065	0.996150804304723	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72188130809893	1.0023426291647
Merged-chr3-57663948-1	1.25426388430197	0	1.43274529098043	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20508597-1	1.8574460006496	0	1.40577678630106	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36470696-1	3.05463529192647	0.886479769923733	1.1651955534381	0.760799135654123	0.446777050763257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44065282707927	1.05629245276768
Merged-chr1-16122346-1	3.59298163214323	0.858586297234153	0.801368795901968	1.07139971212354	0.283989742243651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64200815897875	2.21565186750098
Merged-chr5-125245901-1	1.17022066399738	0	1.73537212632583	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53104651-1	1.68670196395491	0	1.52625873622007	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136028318-5	19.8414917254706	1.19492412988433	0.346285775580307	3.4506878830985	0.00055915981507063	0.0119956852513478	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80897623063754	5.07908874868505
Merged-chr5-88500668-1	1.9917342846849	0	1.37024534294827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130899047-1	2.0974599838826	0	1.37372711766692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78596993-1	2.19551997727304	0	1.39455082640946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84530750-1	1.7035641908595	0	1.50149841468843	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108691669-1	1.44048879188994	0	1.54842037295404	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35093784-1	1.84781256159227	0	1.42057268253778	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70836988-2	2.03478890275483	0	1.41712905739908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-88478237-3	4.31843952010758	0	1.33625261422459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64578301-1	1.15679032639894	0	1.70565452700371	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125480237-2	2.8875652006011	-3.54732060686705	1.4519233633445	-2.44318722077438	0.0145581827772795	0.146409597364693	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88079112721913	0
Merged-chr3-51046152-1	1.8520853001485	0	1.5341545477527	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140269089-1	2.50124215868937	0	1.36164082970231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9154374-1	1.81249413339718	0	1.42409430802991	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46794381-1	3.29580485489778	0	1.36291715052308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44767986-1	2.78644753534082	0	1.41521366864722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-162701096-1	1.30364526224423	-3.86563659604538	1.47049953423444	-2.62879144538993	0.00856888942822224	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36426935188304	0
Merged-chr5-74629247-1	1.26120293023773	0	1.55711121757897	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64538541-1	1.2611663925436	0	1.44288037797198	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92060009-1	3.93165225531649	0	1.32172557827284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105445233-1	2.47986426497885	-4.02566261904519	1.28360137602205	-3.13622491705402	0.0017113790038623	0.0287263735901326	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82018319279436	0
Merged-chr14-61648354-2	4.1581307898112	0	1.3228217208981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133815965-1	2.28332255597553	-1.72182888358838	1.33044377043287	-1.29417636570103	0.195604508441059	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.756987780647496	0
Merged-chr16-57500155-1	1.76106916301588	0	1.60832126007725	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102503447-1	5.43844678070342	3.82840335984819	1.23943906127397	3.08881935342034	0.00200953587853334	0.0325440226811994	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	3.53535434291911
Merged-chr15-49229071-1	5.98557699971495	1.178158999983	0.867558134829889	1.35801735086492	0.174458178603636	0.923761780976678	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46410971804191	3.193654772508
Merged-chr17-30972205-1	1.25431420137149	0	1.47708779573684	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29268032-2	5.47028397691473	-1.08619103486531	0.812332084843483	-1.33712684151161	0.181181236967293	0.949071024783828	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89986240638619	1.21171060354126
Merged-chr14-104901328-1	2.10450645744585	0	1.39983454949413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32591289-1	2.60010088771465	0	1.4107869218297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120660645-2	3.3489378057777	0	1.34288917898865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123353598-1	3.9116370437098	0	1.35014140222112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88290111-3	4.40308062863511	0	1.3127052021033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3030176-3	4.87672316087202	0	1.33566053992509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-116476046-2	3.99021499019608	0	1.32651899108676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66899867-4	3.81713894948463	0	1.32840345114099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59843021-3	4.07721779696917	0	1.31447849289708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88148489-3	4.45055737740841	0	1.32464329667044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110866845-2	3.02136764187781	0	1.36906714322325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18622108-1	2.80755194252504	0	1.34395329099883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14273139-2	3.14820993063079	0	1.34863358585978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118862913-4	3.92056571174631	1.88755612092432	1.31532782348434	1.43504614380021	0.151273948861514	0.834119269454435	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr3-144043363-3	4.03044361117932	0	1.35383522604324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-16319173-3	3.17222761180867	0	1.33650419850949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40585317-3	9.65478471862184	0.404295059021072	0.493349663232659	0.819489885473804	0.412506970361841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46790170143933	3.98705560212842
Merged-chr11-72428815-3	3.88105585987531	0	1.31994344499963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17740477-2	2.97414724652528	0	1.34743747603649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-88478667-2	2.70424940818574	0	1.37348524863124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35168960-2	2.69933700115721	0	1.32687312937383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119356918-2	2.32834937126009	0	1.38996469324943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141020609-1	1.87227912167261	0	1.34547801907667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142077176-1	1.97336439521526	0	1.39165913103272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68117667-2	3.23925355974902	2.39508501776055	1.22975689269293	1.94760853302947	0.0514618219637379	0.378483310978325	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr3-84769563-1	3.38022720173163	-0.346232165676494	0.964861776241296	-0.358841208349316	0.719713883121494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68053959473514	1.61477032079243
Merged-chr18-88774295-1	2.44800939237478	0	1.3471759592315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34428916-2	4.2562882426833	-0.22332228019832	1.16728484752792	-0.191317723922549	0.848276675878733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.89544522622072	0.803125334851723
Merged-chr10-107810812-1	3.11605328355989	-3.88853086888255	1.46239665106617	-2.65901242733808	0.00783700721916885	0.0914821496505551	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49335834954757	0
Merged-chr13-43032610-2	2.8488042140666	0	1.34772509096045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62719921-2	3.0069979714598	0	1.36107520384299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102825146-2	7.04278412611039	-1.68309321317001	0.755127331286714	-2.22888663068528	0.025821448880805	0.228264123182506	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96757527589313	1.45391938817053
Merged-chr15-96569318-2	4.65915132451802	0	1.3038812260571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24325885-2	3.43624465902483	-3.419224220173	1.01612317485056	-3.36497021699743	0.000765519217691722	0.0154023613079658	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51711359837145	0.563523181795778
Merged-chr15-84845004-2	3.56989011911522	0	1.32360487279885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55473942-4	9.57080666522641	-0.660566106560161	0.570092130688907	-1.15870062223438	0.246578237124772	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51712320602382	2.46801699129062
Merged-chr7-29001271-1	2.34618984932735	0	1.37156195052402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71131620-3	3.81712034081685	0	1.32335232671581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86637906-3	3.42822453423286	0	1.34221809271463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102075125-3	3.59409248137212	0	1.30887291138961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123883812-1	2.88396541499372	-1.50235540551339	1.31604046366999	-1.14157235053688	0.253631822409474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	0
Merged-chr9-65666217-3	7.88584263296644	-0.572123455374367	0.61442848650026	-0.931147347404319	0.351777349597896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6423596023914	2.87815767815405
Merged-chr5-66160600-2	6.03387744557657	-1.10536808022926	0.823623293209563	-1.34207967324694	0.179570163838438	0.94280828588997	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73554070656219	2.15841814526637
Merged-chr5-136251200-5	11.0770677575968	0.0385449063203566	0.516698954074554	0.074598382706993	0.940534260952431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.86816522973249	3.19077837110562
Merged-chr1-61187567-2	5.26320512651835	-0.813110217320005	0.744181914163852	-1.09262292168656	0.274559394425223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28393147644177	1.38403867470374
Merged-chr18-24045857-2	3.69927384388078	0	1.31843703243968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129186272-2	5.22172269702206	0	1.3173567083649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44061045-2	7.31667933949505	-0.18980404139863	0.610646784321628	-0.310824598232324	0.755933968607426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33932626229983	2.60016286176753
Merged-chr19-16178749-2	4.82357897599516	0	1.33723144210368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146663206-1	3.86788029260437	-2.36665995430813	0.937029937261513	-2.52570367305952	0.011546682937196	0.123733936243688	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3797498102303	0.773587911294612
Merged-chr1-131765764-3	12.3489738173746	0.819049470054042	0.43370209439551	1.88850706657441	0.0589579101407367	0.418540314617771	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5801421226468	4.5105579095718
Merged-chr2-27281171-2	3.13182990953383	0	1.34180161369134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79794394-2	2.77036990272453	0	1.31987551990087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23100756-1	3.37815155656441	3.11476423060324	1.0194595858898	3.05530917921048	0.00224828620061239	0.0354442726333455	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.808340254822995	3.84027597956335
Merged-chr3-75321199-1	2.28445708442718	0	1.41027614338323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10909938-2	2.4284258632723	0	1.36918612732725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27968135-2	2.79819067704125	0	1.35696748975892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15621205-1	2.13599517411664	0	1.35282917726605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156724306-1	2.23899016030262	-0.400277365062664	1.27788036040669	-0.313235399388464	0.75410182584394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32167431972681	1.82413829516899
Merged-chr19-29420668-1	2.27284027446417	0	1.366768676215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100506045-2	3.92495197808848	0	1.34651696071918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122445768-1	2.34789968547816	0.277020285941077	1.07401172390995	0.257930411534598	0.796460613746781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29174796834259	2.52241198578051
Merged-chr9-55166892-1	1.60210808640638	0	1.51399607630096	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-38472451-1	1.40019201135675	-1.47329688576309	1.68819127303055	-0.872707322505174	0.38282262546097	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37077378138221	0.683637474991079
Merged-chr17-44055887-1	3.18889610247265	-0.159289297148403	0.959512111987746	-0.166010720613434	0.868148513414033	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51448486535072	1.38353752608252
Merged-chr2-57288216-1	1.86268838986241	0	1.50670422144587	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-94477207-2	3.48361587390864	0	1.37253876068813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93103144-1	2.89589300592903	0	1.37997800322243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20781425-1	1.74319992352268	0	1.410933229887	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24616597-1	2.42375449641154	1.99166975456288	1.41048036051358	1.41205068168243	0.15793503875288	0.860178616631582	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.543422078079461	2.06806339973931
Merged-chr1-78895467-1	2.10187539731116	0	1.39700227424492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118606449-1	6.23578573067596	1.56255759691692	0.677161367524046	2.30751143206857	0.0210263256674911	0.194725946296467	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72214149773459	3.61443201731899
Merged-chr18-5536989-2	3.40437105203789	0	1.34117683418087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-11328420-2	3.35920234559819	0	1.40746746335011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11793744-2	5.48895519390997	0.768701644587873	0.856716505266756	0.897264894352096	0.369577584364089	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18332319772943	2.33009559628045
Merged-chr8-94966779-2	7.00672936942771	1.30665999425332	0.660598073065911	1.97799546733306	0.0479292179999035	0.359873914675594	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83116504134129	3.58034178823742
Merged-chr2-164524271-1	6.5177639087974	-0.895497536215613	0.659200524081882	-1.35845998827571	0.174317770464413	0.923450878243889	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7986135019059	2.32240838767146
Merged-chr7-90213725-2	8.33250603161751	0.127866133734582	0.728255630310678	0.175578640813301	0.860624983813426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39480753532911	2.36869737571727
Merged-chr15-63652701-2	3.90329251258671	0	1.32585150383454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45296723-1	2.01995300968014	0	1.41249888847589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35480946-2	7.60397249829064	-0.0770786867612342	1.07220539581677	-0.0718879862589374	0.942691050889082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	0.683637474991079
Merged-chr8-83171521-1	4.97320482654735	2.72803991210155	1.18139862156979	2.30916124523376	0.0209346352257934	0.194179513621674	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760882982080442	3.48445201869237
Merged-chr3-65603468-1	1.75957700501817	0	1.56478018620708	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-23048234-1	2.28500272743183	0	1.36632851270245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17252357-3	13.0368868189707	0.0248425515047642	0.532535292155479	0.0466495871179017	0.962792510217171	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.70100269634306	3.06438112643223
Merged-chr18-9399550-1	4.43278368104982	-1.18988270596709	0.738354865119552	-1.61153228911741	0.107063755387757	0.653680606993109	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46800201998598	1.93317259409221
Merged-chr10-81300310-1	1.7547399313779	0	1.41043817398944	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102537894-2	2.99415481399584	0	1.41411188912028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61761951-1	2.52267208230025	-2.41135311578097	1.05012693102897	-2.29624919096038	0.0216616373997952	0.199535009518892	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15099333267511	0.73596151290311
Merged-chr10-37233067-1	2.20392489843482	0	1.4210018167206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-54924362-1	2.64347104935461	0	1.36185974531025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36700658-1	1.14391589203632	0	2.43948700191279	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103505018-1	2.95254010311384	0	1.34360574464279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36053805-1	2.96725395539726	0	1.34923869686568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93761840-1	2.86871824429203	-1.18038931700049	1.03885078202928	-1.13624529857381	0.255853917145717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68299018413627	1.46316345736407
Merged-chr14-70833952-2	3.85836886799668	0.704402795016848	1.06670430245458	0.660354320682832	0.509026478567546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	1.04220233489076
Merged-chr7-142057007-2	2.66061203757928	0	1.38588387917989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45006580-3	8.44187580702203	-1.27999408044666	0.682213796982477	-1.87623599245316	0.060622881817084	0.42697379125018	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08294874088148	1.73830414206781
Merged-chr13-9134279-1	2.85081778561803	0	1.40898989926941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126124347-1	2.37934739496952	0.572916567528439	1.30919602328228	0.437609462097267	0.661669410886818	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.727571417065705	1.15692263537643
Merged-chr11-45544816-2	5.64984697532557	-2.10751812513679	0.716418114856588	-2.94174321033001	0.0032637044318652	0.0472882549456016	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57825229710991	1.31470332505763
Merged-chr18-53224422-1	1.4298404245338	0	1.58585917580291	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124170977-1	2.38995293941747	-1.99171058623826	1.95413287840962	-1.01922986314995	0.308093852314486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43856153323188	0.683637474991079
Merged-chr13-82027002-1	2.81357809852465	1.27911288106159	2.20460614860357	0.580200178554251	0.561779633246921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	1.66210910851734
Merged-chr3-145628068-2	2.7080176524362	0	1.35372154185273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57065474-1	4.1632560320062	-2.57561516179535	1.07675211623872	-2.39202238189456	0.0167558205398859	0.163275551595494	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29697412586525	0.306240821987646
Merged-chr14-88763526-1	4.24943722062021	1.20371717995853	0.918851132106158	1.31002415723144	0.190187663484884	0.982488335915638	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90505053382551	2.79557489340392
Merged-chr11-67742144-1	2.18001593764543	0.577720696716343	1.52778083292892	0.378143699845213	0.705323846479056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	0.73596151290311
Merged-chr4-9689537-2	4.95200837321488	-0.88801515178993	0.751320872534526	-1.1819386153805	0.237230058417174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43208831807792	1.80442813729532
Merged-chr17-36193820-3	5.50710067581856	0	1.29677785612146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116429103-2	3.1713231032562	0	1.32175370041327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167962514-3	3.53149004534516	0	1.32757923968621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54617846-3	4.1807282890003	0	1.35163553715278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128201035-3	17.6738809124043	2.04790179336162	0.397599972050401	5.15065879607764	2.59573046866485e-07	2.73141067963564e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40175320524733	4.68583757085218
Merged-chr13-64344343-2	6.22364874917919	-0.515974248410421	0.739576629996002	-0.697661645167466	0.485388819916219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22089704568899	2.30999519426894
Merged-chr6-95098585-2	3.68473655081053	0.768068390145773	1.33426066788047	0.575650926865649	0.564851151106463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.420961122473315
Merged-chr4-107777196-4	8.9486187276244	-0.431148689584796	0.619049450663172	-0.6964688994117	0.486135227571681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91816373484288	2.70252588433993
Merged-chr17-42909922-2	5.69830171025665	-0.618561909561554	0.871142819873087	-0.710057978382546	0.477668183332379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59582549727367	1.43393032742955
Merged-chr13-5800062-3	2.68285799465299	0	1.32704799532977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99324851-3	6.52609963521439	0.587232088717262	0.881482108775977	0.666187189587649	0.505291460040857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07919575399043	1.89807913501705
Merged-chr7-145149100-1	5.54930869970304	1.13884192691827	0.775445762599614	1.46862873181537	0.141933517393652	0.797076970402679	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55747054287748	1.76620369058164
Merged-chr18-77869778-1	2.60267136360938	0	1.36168007320009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33973616-2	3.5604855383433	0	1.32250331648417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3739288-2	3.71176434930995	0	1.32313930472771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100826797-2	2.90473108170657	0	1.33645131190427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29322893-2	2.08098144627616	0	1.44349924671777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27692857-2	3.13466192607689	0	1.31750311169354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88132093-1	2.69775644385187	0	1.33286035005184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95390447-1	2.42585748887009	0	1.33076698086676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75596629-1	2.35605129484287	0	1.35306363014513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69594222-1	2.24900642389696	0	1.39244856526347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27304291-2	3.0785282559123	0	1.37683216296436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67462590-1	8.39580340327137	0.889136893006242	0.606270424466198	1.4665681470263	0.142493570359698	0.799082443453289	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8368596816179	3.24074086074821
Merged-chr7-45078630-1	3.58194555069093	3.49507190157931	1.20719238833638	2.89520704019336	0.00378908527958682	0.0528385759026634	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.958904680953568
Merged-chr13-45750199-1	2.42161711359069	0	1.3233466474466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17001260-2	2.38613074521622	0	1.37691768509038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82469549-2	3.56769812265458	0	1.35347819743411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37001400-2	2.69372398492594	0	1.34623099969762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45563872-1	2.27814154446389	0	1.38793128217347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128204974-2	2.01866256876827	0	1.50620395135195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32040347-1	5.14266620900175	0.545386715826509	0.993747281147654	0.548818322498106	0.583130134901342	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68732726521769	1.69469308021391
Merged-chr17-84203392-2	5.19034559845051	0	1.36338014522217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10546135-2	2.85311696364422	0	1.35062253333403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74683609-3	7.66542860567425	1.65361163252637	0.71817026567709	2.30253424787414	0.0213050623484129	0.196721860141217	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18829482085363	3.66706078274458
Merged-chr8-46951915-3	4.80185741689542	0	1.34630352494821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78649171-1	3.26654734054082	0	1.36197890168452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27664761-3	3.28197686741171	0	1.33863972623449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118908401-4	7.65361485699482	-1.8479520543677	0.676304044286006	-2.73242792199867	0.0062869425931279	0.0777050407963941	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54629900764964	1.99578006370328
Merged-chr11-100629669-5	13.6837334177904	1.7295276434757	0.468615702820077	3.69071636538767	0.000223623381935301	0.00594987521007499	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97637977424813	4.49131459850628
Merged-chr18-47734962-3	6.59612573057431	-0.96147039017853	0.739460173010889	-1.300232825608	0.193521183253811	0.994531120081622	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.17931349758036	2.76579939914299
Merged-chr3-28026359-2	3.11873736646971	0	1.3232815486301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97705471-2	3.41253142826125	0	1.34228241228286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154040353-1	3.53810654618231	0	1.33371319869771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105044023-3	3.33828203681512	0	1.35573692945764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87176263-3	6.89332916620402	-1.01512690873691	0.882727956295301	-1.14998839846115	0.250148649661422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22541940128244	1.03295826569721
Merged-chr1-57837425-2	5.75320641495651	-1.56678740841538	1.18577418656663	-1.32132021945254	0.186394614909626	0.96875387782426	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	0
Merged-chr7-19348114-2	6.34432708084149	3.05492741564536	0.812784496506088	3.75859459521873	0.000170870437550619	0.00483572958518093	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44128411238817	3.49227199825724
Merged-chr13-67516183-2	4.25551044873001	0	1.34173445297115	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31819926-2	9.89670046936486	0.0538386657813347	0.567069001660104	0.0949420011034304	0.924360895120757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08812852672291	3.30483543417642
Merged-chr8-117543144-1	2.33648259799306	0	1.39251832701821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-148906871-1	2.07800762917275	0	1.40632349926838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27755112-1	1.38109306946986	0	1.60428005169944	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92142745-1	2.64525365130089	0	1.45795553202883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15861490-1	2.87058319584739	-0.294597137453587	1.07982069737554	-0.272820421176955	0.784991261011912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03394346843336	1.40753896716966
Merged-chr1-54883202-1	2.21573680226919	0	1.35065280579404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91862311-1	2.20778085411941	0	1.39280807508039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97300757-1	5.35562425802549	0.184933226742575	0.900930517695086	0.205269133535073	0.83736185843158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69323125611877	1.93871841517079
Merged-chr5-101970277-2	7.83250287869218	2.6885619658825	0.71648929503501	3.75241051682583	0.000175142356249273	0.00492887700752154	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48926183180263	3.81146550482523
Merged-chr10-4105799-1	4.21151981310767	-0.695684530722037	0.778101228770752	-0.894079722533124	0.37127923774525	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48498192430803	1.99834080004871
Merged-chr2-110205053-1	2.23342908785573	0	1.40632293869612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165792936-1	2.3187837445944	1.28790900328597	1.34747346722878	0.955795445779496	0.339175589677276	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-69017125-2	2.70449958279687	0	1.33271846377355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3699511-1	2.52605711617929	0	1.46368300111154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13884766-2	3.34472130922068	0	1.34475634545953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97871250-1	2.59757412600579	0	1.32585958918736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92421629-1	2.72197682367727	0	1.37301398844418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84061083-1	2.93647408317896	0	1.33971735140522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164933622-2	5.51329784197464	3.07005775781938	0.85724902289583	3.58129047198978	0.000341901274321037	0.00826558663402977	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.978861522855236	3.78052024733953
Merged-chr17-31492644-1	1.45961295460753	0	1.45563295296027	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15938350-1	3.20689354379683	2.00863543584988	1.80209092633259	1.11461381137833	0.265015949225056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09438939399008	2.90484805568933
Merged-chr1-80627003-2	3.26535755533852	0	1.31570975268466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60478147-2	2.84741305890199	0	1.36464323739011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152740620-2	3.99408631892048	0	1.37165316455652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127322449-1	2.84733471207306	0	1.35566197638819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120017232-1	3.72830832309026	-1.40339118917278	1.03340957300659	-1.35802031046584	0.174457239514136	0.923761780976678	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52981774419757	1.22237730641564
Merged-chr7-63906676-1	2.03547251721656	0	1.38031147567437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66358799-1	1.52724466256587	-1.33515925139077	1.6323738858304	-0.817924902487377	0.413400069817195	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0
Merged-chr7-123205498-1	2.82547833891039	0	1.33984395309989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48428628-1	3.71125982981827	0.424926849793927	0.734220727999397	0.578745373958274	0.562760994961492	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01746023738297	2.83787160719903
Merged-chr2-16111353-1	1.76458562570766	0	1.45141985573304	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141475020-1	4.17686294621582	-0.877827403908751	0.974461515817591	-0.900833321439315	0.367676947914931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24261403264178	1.19380919831911
Merged-chr5-23908845-1	2.57248333335762	-3.64961116990023	1.11820281466797	-3.26381862219147	0.00109921510257187	0.0204319088828313	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45703855079991	0
Merged-chr19-55662331-1	1.38332196580418	0	1.42358568713237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3908401-1	3.23549556311935	-1.78564315688286	1.13260050338165	-1.57658693559768	0.114890600771117	0.687353596467233	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66710691268213	0.469435083901436
Merged-chr2-27018003-1	2.88182238511807	0	1.37819887522145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108263541-1	1.86662583153162	0	1.40965013804396	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136548998-1	3.26137704119666	-0.518925238487735	0.803484208334748	-0.645843730473841	0.518380563973962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45900060617304	2.15292080626044
Merged-chr11-16623832-1	2.31884742398726	0	1.39628462187837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60897089-1	1.73110413598103	0	1.53746072290149	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99166634-1	1.74087972951512	0	1.54557533303251	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8339756-1	2.74473627215961	0	1.33898967323518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87545753-1	2.53337521330456	0	1.43695651971404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65423404-1	3.56922727740632	1.23549831512125	1.05887033761623	1.16680793788468	0.243287940651305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43714491638244	2.33919054069747
Merged-chr1-165735020-1	1.85870528667796	0	1.39343480227572	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91269186-1	2.57159106932434	2.0588939934952	1.08470937855807	1.89810656586387	0.0576820454204144	0.41248532939838	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.68807364458303
Merged-chr17-86249549-1	2.70774381965939	-2.71441599943537	1.22082262632565	-2.22343192278885	0.0261866891240642	0.230474940024915	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46516766833292	0
Merged-chr13-118478562-1	2.12916953835222	-0.8991837772229	1.45131668778012	-0.619564141164986	0.535544781180009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	0
Merged-chr5-74961318-2	2.64698329980772	0	1.32416508061651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163590336-1	1.984411497316	0	1.39710318600089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39426913-1	1.33352022833348	2.00196076521657	1.27364385007961	1.57183718595386	0.115988315106132	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.75254783872319
Merged-chr2-79774610-2	5.43520813676962	0.119629531356278	0.733765563031423	0.163035085568815	0.870490809946413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46116783025436	2.24817298452201
Merged-chr6-134319402-1	2.91533099637487	-1.22370548783961	1.00147665610897	-1.2219011600271	0.221745006737729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28310415218679	1.13404870833161
Merged-chr15-65810952-1	2.20214717306316	0	1.42369562942972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115543117-1	2.22873694318153	0	1.40229560674847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72196652-1	1.3629926228825	0	1.43952040152168	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-29561080-1	1.73867455582331	0	1.3644843982281	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54911611-1	2.08446882717279	0	1.38950454629406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25433772-2	2.48221061479764	0	1.37143186699066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128343703-1	2.98482756277029	0	1.36078177567394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100590658-2	5.82267131228558	0.286642977686555	0.748088387964478	0.383167259775948	0.701595751838261	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6639745101518	1.68598010415578
Merged-chr7-132304539-1	2.81822239614768	0	1.33720534174179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67612437-4	3.4306362926462	0	1.34518426734674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172324901-4	6.55414560555249	2.95935492287588	0.826319478642878	3.58136894913361	0.000341798574527912	0.00826558663402977	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	2.59064915293718
Merged-chr14-121991476-2	6.47736338786779	1.16147192029207	1.06572513445265	1.08984191396461	0.275782787204838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	1.08974267817771
Merged-chr1-180366584-2	2.65845032503082	0	1.35443524773889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125265947-2	5.32652524602766	-2.1106598681766	0.932798367904034	-2.26271822593256	0.0236530645678412	0.213485242714109	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4849564237028	0.793480537552656
Merged-chr8-85456723-2	3.08486950005754	0	1.32495394835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21275943-2	7.08416534342946	0.256682085948129	0.743081904658725	0.345429062851444	0.729771831260648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54451718465591	1.52944205045577
Merged-chr10-122738063-3	2.81053268124124	0	1.38015814057313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117577270-1	2.17614622038398	0	1.37783891286691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141565437-3	7.58113139843062	0.0145205728196586	0.546807219712492	0.0265551958646293	0.97881450916496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25272308978312	3.04531397392308
Merged-chr11-121652664-1	2.75659452383818	0	1.35410403575859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58354188-1	2.34321908344922	0	1.39505664362153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87414047-1	3.31989095153917	-0.32374786703343	1.17300081515374	-0.275999694843346	0.782548300613659	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93155200635557	1.45795114796949
Merged-chr1-88424801-2	3.37923359165441	0	1.32183846850619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66469469-1	2.86332983165416	0	1.32609659562025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149806865-2	4.48235119374307	-0.952385646233944	1.08855096392363	-0.874911398545016	0.38162211651112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51026130516005	0.733321818366247
Merged-chr5-64354932-2	5.69975850110766	-1.33496995245664	0.729326949735119	-1.83041357917939	0.0671881186993567	0.461373430061305	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57529561282319	1.58492111464609
Merged-chr8-36148892-1	6.61839717222609	-0.563247238119386	0.918567266760064	-0.613180175803619	0.53975721131248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98730686542051	2.20662832430543
Merged-chr17-73395371-2	2.60568499865083	0	1.3869603257879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165901263-2	3.69187812294795	0	1.36852806506266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8762394-2	2.7609899753359	0	1.35031671241653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92936941-1	4.66044884898352	0.316651189666462	0.738195419056649	0.4289530678355	0.667957379432686	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74521084106572	3.40748451440342
Merged-chr5-147435537-1	1.53755759526159	0	1.5155543716822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76525141-2	3.18451122074022	0	1.33876718141239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134266946-1	1.99141113143159	0	1.48948764816132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46430426-2	2.90964349848243	0	1.37125050751198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-3293672-2	3.1479270741723	0	1.32475521179978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30624070-3	3.88955648231386	0	1.35341585713719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17646217-2	5.27309118339509	-1.06841571304708	0.832520877086368	-1.28335005457916	0.199369463616043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25316721642993	1.29281866668399
Merged-chr8-25089753-2	3.65115684327513	0	1.33366237434176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112951683-2	7.86833377012159	0.511019843083708	0.540503830445064	0.945450918752827	0.344428717057546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18349889279778	3.67887106930069
Merged-chr5-125330304-1	2.62159486990376	0	1.33004506796813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61193580-3	3.58669300339971	0	1.34375774044155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111295517-1	3.34149338409252	0.691614757049569	1.16769006238922	0.592293091571278	0.55365434121766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816279004064202	0.898163539755574
Merged-chr13-62470121-1	2.23963616808361	0	1.36570615946143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-89270713-3	3.70797208361688	0	1.32952328963754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78018924-3	4.02757678531339	0	1.32477771519203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143903744-3	4.80605322075711	0	1.31627593024886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97394327-2	6.66157975272114	-0.561120675402929	0.773661286760999	-0.725279505391966	0.46828057618704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19649720804213	1.40000983364339
Merged-chr2-151575693-2	3.37280930533826	0	1.34187434293175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114831620-2	3.08690693588977	0	1.34793292086366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89308291-3	4.13745186921487	0	1.32180688791434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87107772-3	9.4275484109711	0.658598990547512	0.502103825477283	1.31167889414399	0.189628500957221	0.980570073874381	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57150520208404	4.25679707735132
Merged-chr17-79015139-1	6.23597035215858	0.0588812238374013	0.62355301374893	0.094428577104287	0.924768715975854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43190843266799	3.62941356968037
Merged-chr1-36053239-1	2.65882300423476	0	1.45021919549927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165900342-3	8.14414240193774	0.00240187548823256	0.70476447983137	0.00340805411874228	0.997280771500173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39169743369092	1.86771754965002
Merged-chr15-72831544-1	3.43786134203906	0.151171055772591	0.886358618097564	0.170552925966983	0.86457531510065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77673528794458	2.39791575814421
Merged-chr15-50885670-1	2.22581625384176	0	1.52878947774855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115503598-1	1.47960939938813	0	1.72319390282206	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83785632-1	2.64842278255692	0	1.37130024150346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91732971-1	1.69624394507922	0	1.40230457374023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40596439-1	4.25926747855369	0.927484148884372	0.814001168211867	1.13941378109051	0.254530610668312	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62262607661612	2.56449049229855
Merged-chr1-171579742-1	1.57906240332976	0	1.43888917996511	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92712620-1	1.74156143053748	0	1.68230490274334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-56751724-1	2.49664358445393	0	1.36654232361631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101919834-1	2.03798698749782	0	1.40712253901103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12497251-1	1.98812755078363	0	1.38771435416346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157480334-1	2.45890329077298	0	1.36206717404018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73559851-2	3.19317199423341	0	1.34478853594261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-44146137-1	2.27093042175881	0	1.39885481271703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22190689-3	3.55701754349236	0	1.35972156270355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67907225-2	3.8744218475633	1.87382148154002	1.33759858141882	1.4008847703415	0.161248533685754	0.872552722940483	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr17-47743528-1	1.77560811916477	0	1.45623817077045	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95582312-1	1.79229023287998	0	1.49321549684843	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47080831-1	6.81046080537569	-2.57586294907229	1.05327006201503	-2.44558640938142	0.0144616789886036	0.145886226462683	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41757009541894	0.469435083901436
Merged-chr7-28294675-1	1.58616613238177	0	1.42024364063367	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24856253-1	1.39593558897709	0.0301376429294879	1.03047295136173	0.0292464182486906	0.976668060641971	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68892242138651	1.99654999675826
Merged-chr1-167212478-1	2.91055048846778	0	1.32257696444105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47719143-2	6.55234574486258	-1.10157125979184	0.620702758534967	-1.77471623034487	0.0759447540478369	0.505725659636192	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35897214850088	1.58321107267933
Merged-chr7-46739193-1	1.6678827847993	0	1.42324315000037	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38289690-2	3.70979281531521	0	1.34752791833663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121336303-1	2.2858209609971	0	1.35241272288447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77821103-1	3.02597913913428	1.87120848751358	1.0851756239561	1.72433700702926	0.0846470222354446	0.547065892752498	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	1.38601560292234
Merged-chr2-129584416-1	6.17111475452878	0.951798816045555	0.7661896839627	1.24224958384051	0.214144490448014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73357760382734	3.68120317153615
Merged-chr9-45274358-1	2.60060805560301	0	1.33952417746687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136681984-1	4.95392663597028	-1.58932974264892	0.793137659281634	-2.00385106425084	0.0450860168998968	0.344100777895428	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14681778676427	1.38860239282551
Merged-chr9-41138494-1	4.35836634446813	2.11910140912858	0.716000633047933	2.95963622281702	0.00308002498547912	0.0452693011023659	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66157036073427	3.63433742123585
Merged-chr13-60608632-1	1.9967039365387	0	1.37355932577518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163048145-1	2.21728169392968	0	1.4168918296315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93361931-1	2.32887693002087	-1.19704639797013	1.07226644992291	-1.11637028096532	0.264263669233966	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30784873279888	1.15658857927843
Merged-chr1-159753849-1	1.19119881307865	0.676330514073081	1.78105954115384	0.379734926567883	0.70414219112491	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.469435083901436
Merged-chr12-99306452-1	1.78477023271271	0	1.37604082961017	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54479506-1	4.98988324274091	0.255899861941501	0.868707210529347	0.294575501204333	0.768318179346097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19203306929306	3.00823083713182
Merged-chr8-46861352-1	1.90089128804985	0	1.41369459825963	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41014354-2	6.30727201418011	-0.672856129356541	0.784163403683672	-0.858056020206687	0.390861530689876	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28872229227872	2.05631250707362
Merged-chr3-65801208-1	3.22777191549268	3.36743315229819	1.15317773472483	2.92013368876024	0.00349881256263787	0.0496597319109762	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr13-60826220-3	2.96981599101229	0	1.32862161004159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142005554-2	2.81433718357615	0	1.34571143350064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129713005-4	11.5560427944673	1.675927968626	0.514145254486089	3.25963908837624	0.00111554068076495	0.020638765947131	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59861113596549	4.30935188919693
Merged-chr9-118821785-3	5.01597714521041	-0.980701763110438	1.09581851067627	-0.894949075559243	0.370814310968944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12154377408284	0.563523181795778
Merged-chr7-67227383-5	8.50894138746652	0	1.35666269249862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45453214-3	12.4606008445212	0.154010613370637	0.551741627011601	0.279135388433178	0.780140925981334	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.399564503657	3.66812819295265
Merged-chr2-58933564-2	3.04565146999063	0	1.33605800477776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89009022-5	10.5090420054535	1.50597865938535	0.711403997062237	2.11691059595438	0.0342674362233422	0.282875175271668	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70325837003325	3.54790569823016
Merged-chr3-50402870-1	3.39020078277887	-2.21728978799894	1.1341755279962	-1.95497939539952	0.050585502311074	0.373974457972558	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32365440350558	0.851599296279844
Merged-chr7-130762787-1	2.2248953290514	0	1.39099785481673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122553938-1	5.78349709098687	2.83875066899683	0.686081108680197	4.13763129910061	3.50909650722505e-05	0.00137720973189867	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29727068782171	3.98141255640769
Merged-chr1-165198234-2	3.825914118513	0	1.31084346957892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82755212-1	2.7318464525527	0	1.36583860137413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68778115-2	2.50061864403255	0	1.3690724784928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-113437584-1	1.21901989542702	0	1.81830420628621	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61938451-1	2.14274936918199	0	1.33975374502218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85286683-3	8.76430075956666	2.58893171563719	0.882651186330587	2.93313117993991	0.00335562078617363	0.0482562490962373	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	2.278467196053
Merged-chr16-94269827-2	2.49358061450266	0	1.38254279838976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27702647-2	4.47060867097034	1.74366823454003	0.860251245310532	2.02692904432891	0.042669669710669	0.330993855284114	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.959759098965846	1.97634481356229
Merged-chr17-24758291-1	4.0981129193885	-0.277109265851602	0.756865765151428	-0.366127361826387	0.714270041127149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0333767810848	2.32868649797447
Merged-chr12-3712754-2	2.50097698813642	0	1.40282008784396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65557183-2	2.55078396303817	0	1.38016948837534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26645740-1	2.07311552438207	0	1.48894917941344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79887160-3	3.53945047602603	0	1.33073274629824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13517025-1	3.97043162667622	0	1.33840756505699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50584830-1	1.55760956334623	0	1.43654239647468	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75071520-1	1.66520078020293	0	1.39469950366432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82999207-4	11.4905297809086	-0.516818043927589	0.608873043584121	-0.84881084714368	0.395986553374774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4166037983119	2.32345140313869
Merged-chr18-39453053-3	5.24501857459779	-0.788741704787801	0.780804425085956	-1.01016551577685	0.312415997698673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51758308185896	1.41959898789419
Merged-chr1-152560971-3	4.30982626384634	0	1.34741210226723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110537800-4	12.3855144446272	0.633098975526553	0.444774075643265	1.42341698897563	0.154615310431172	0.84783556638708	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36255070619769	4.03813496885157
Merged-chr10-13948329-2	3.26982650599753	0	1.3300087759294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28294183-2	3.4178298196026	0	1.31850639641146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48198566-3	6.95553862177111	0	1.33790132007086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20916635-6	9.70901560684078	0.00917532319445607	0.495357908069955	0.0185226137404479	0.985221937503009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72676390564979	2.63882497122968
Merged-chr19-10199004-3	4.03916785367551	0	1.3145588089626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3924587-3	3.41159072555751	0	1.3709559929606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59181513-5	9.19626223240365	-0.748448171907799	0.658614327456833	-1.13639825419202	0.25578992611937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07421721228129	1.9498007700989
Merged-chr16-30970441-1	5.78664997802022	1.24628341796348	0.8812391180216	1.41423978177616	0.157291511134128	0.857388312193089	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42022255751963	3.22909542873586
Merged-chr5-123699373-1	3.11853632675239	0	1.31697202193704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21482492-1	2.93091812815419	-0.103299248802056	1.67050722896693	-0.0618370558419784	0.950692593645376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1450620700416	2.27624770054806
Merged-chr17-27836887-1	2.45585885777279	-0.414857402455722	1.26299897507064	-0.328470102228324	0.742556246353901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.960109972734806	0.61242769162773
Merged-chr10-77221327-1	0.942544480463488	0	1.858975722369	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97339322-2	5.72910025003844	-2.3625674040224	0.800965910461271	-2.94964788534111	0.00318136277476156	0.0463728154984539	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61414075836793	0.845523456341755
Merged-chr1-173491859-1	2.52850605797377	-1.3192439799932	1.31529238192625	-1.0030043495433	0.315858762644101	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.977951900024923	0.306240821987646
Merged-chr9-42150387-1	5.92491521136283	0.494397769590916	0.713326877015754	0.693087258479953	0.488254793222154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13988018878855	3.18601854658087
Merged-chr10-10555009-1	2.98430440967542	0	1.31886979025596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84896408-1	2.19697118810579	0	1.37763473563143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111638245-1	5.27422850505796	-1.89124760949583	0.878219204405032	-2.15350290680229	0.0312791758919611	0.264728536178745	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50991931152282	0.843323834477631
Merged-chr5-64812242-1	2.35324465220687	0	1.33106195849771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90592855-1	1.8978659649429	1.25898351674908	1.5347533430202	0.820316516966534	0.412035692901283	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-68451528-1	1.5634295536549	0	1.43550041289117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140169141-1	4.25140173772049	0.400486446832743	1.17983230986276	0.339443532343445	0.734275629055925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35806933641313	2.09008352533139
Merged-chr5-118636586-1	2.37542229300096	0	1.43191058428821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185209749-1	3.84803004912604	-0.0838847062692041	1.06628585278717	-0.0786699983404425	0.937295109353598	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96119862525681	2.34574658350842
Merged-chr17-44092117-1	4.90749819612898	-0.0521166965830147	0.860487646589827	-0.060566466920887	0.951704479996121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6660575672565	1.79257770822194
Merged-chr3-135206870-1	1.88081144390378	0	1.41689200268778	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86833107-1	1.58224233504507	0	1.39843161167827	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9104145-1	1.76219947698781	0	1.64761792179102	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36998732-1	2.5542057720147	0.676441780991913	0.86936893799687	0.778083678202853	0.436519684190776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76679193294842	2.70594541242001
Merged-chr7-80434612-1	4.73095453335282	3.89446613026649	0.998256340891108	3.90126861281946	9.56898992369501e-05	0.00305767831566638	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	3.45925595033179
Merged-chr7-126907968-1	1.51861529129	0	1.39048157730372	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74442470-1	2.71466031615482	-1.71995178386241	1.22700863785409	-1.40174382706093	0.160991758036249	0.871587907103329	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59578097811955	0.609949614787909
Merged-chr12-102532987-1	2.08768683945447	-2.57134381047052	1.35900202113307	-1.89208240347329	0.0584800024427383	0.416305622504086	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28259983108881	0.609949614787909
Merged-chr2-114605453-1	1.61782499623597	0	1.4174162098244	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83259981-1	3.33398820656546	0.49671396742021	1.07595603420662	0.461648944407354	0.644333089528131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81808865028294	2.82558198591041
Merged-chr11-17821017-1	4.67244676126951	3.21201838486991	1.45496758517125	2.20762195502235	0.027270637368838	0.238143400976091	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	3.35698538648192
Merged-chr3-52404861-1	1.21855839664453	0	1.44994017969316	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116980685-1	2.15417414252196	0	1.3700774428062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-39989037-1	3.16700461433815	2.8337104091827	1.25115116248484	2.26488252910609	0.0235198891611494	0.212665099920364	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.531725110705892	3.29592793539725
Merged-chr1-142894315-1	0.948187878919506	0	1.52541699104909	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136046189-1	2.82134716697026	0	1.32743788193584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87010629-2	2.62492055817495	0	1.33459683951689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75832927-1	3.38838740420927	-0.57275213944051	1.07474057019038	-0.532921297777985	0.594088061551751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11184133908501	0.581381506691384
Merged-chr1-59476245-1	4.00269325172469	0.455822650399855	0.953279333087911	0.478162732137841	0.632534385500611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33019848002871	1.47954504644696
Merged-chr1-33769017-1	2.31018210602674	0	1.34477549884642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109124435-1	1.22247542853172	0	1.46871759294112	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24647363-2	3.17030168252796	0	1.33496952534174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38374884-1	2.18657522208692	0	1.39048579080988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151315962-1	1.02592125998635	0	1.62044095244539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40165134-1	2.49316220419626	0	1.37142931761417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39642561-1	4.58455972535038	-0.74334793409817	0.910133610506918	-0.816745943141411	0.41407363006698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7209675977259	0.926147595614233
Merged-chr12-112849573-1	2.47381532154393	0	1.36237586889359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98708864-1	1.49359117634003	0	1.43859075228608	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58907013-1	2.73967258366491	0	1.40037811775363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76483305-1	4.22216940424887	2.05424987701564	1.02136821402206	2.01127257419358	0.0442966737178545	0.340262188875858	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	1.6995072319729
Merged-chr14-52338839-2	6.0191973086213	1.40811006843007	0.800499866484339	1.75903848006153	0.0785709728954622	0.518773243894804	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02962416752978	2.50670197153503
Merged-chr1-151035128-2	1.92916688084576	0	1.44520545008725	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93429582-1	3.43342744359427	-0.627133773019385	1.00891330053531	-0.621593324903772	0.534209311336037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46044496340461	0.73596151290311
Merged-chr11-54458364-2	2.99676604357703	0	1.37701532579662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16507459-1	2.20227769478554	0	1.37355960362385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94787325-1	4.82442541946328	1.97890191716174	0.752230693926094	2.63071147340894	0.0085206340037839	0.0979228543108095	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87462169760292	4.21057179879772
Merged-chr12-5471815-2	6.62968591660013	-0.173538448438343	0.639098917104019	-0.271536132817603	0.785978713235529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05059474992155	2.97362884642494
Merged-chr9-99109334-3	4.14244828217443	0	1.33330086198821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71654757-3	6.42089226029275	1.6801296856307	0.832340582375842	2.01856033600442	0.0435329370804445	0.336161975802218	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.805058992323882	2.3105729578933
Merged-chr5-129977431-3	4.71288405952792	-2.96474537163167	1.00348979058706	-2.95443501213623	0.00313242119522162	0.0458434928158907	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03861962704105	0.688405034366054
Merged-chr17-34619212-2	3.84375795918145	2.44281746329356	1.29332875920429	1.88878306919927	0.0589209023320739	0.418435590093455	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.916190436775555
Merged-chr10-82863408-2	4.30836208663727	2.30398455711537	1.02495074613455	2.24789782904643	0.0245827056461274	0.219811368794724	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	1.578845274708
Merged-chr6-140853745-2	4.0139395489729	0	1.32422883385689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102451248-3	4.53956194359295	0	1.34785756454173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69110492-1	5.48639046725036	-0.931970592964102	0.835569901912709	-1.11537118657664	0.264691391540143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06586455909256	2.30923017122179
Merged-chr2-79757210-1	2.68766089742673	0	1.40342073615827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152333174-3	3.89015129725088	0	1.3230543422116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63931367-3	7.46727671705403	0.82706491103627	0.643445827105123	1.28536836544151	0.198663590357247	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45505925581045	3.64337020473505
Merged-chr2-124617576-2	3.97804136794958	0	1.36183499272964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40673460-2	3.06546201168376	1.26426683187448	1.54199192794045	0.819891990980195	0.412277682893645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr5-117149262-2	5.87750493366477	-0.074809039370088	0.795681887540852	-0.0940187787877063	0.925094239496006	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20839034520778	1.31016258956889
Merged-chr8-26154052-4	3.85075460391243	0	1.33174013639774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76657703-1	2.41424036305134	0	1.32932095646345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167268466-2	3.17016126309544	-3.39385091912928	1.03021693809431	-3.29430704702566	0.000986646576687133	0.0188353512124445	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.292777262832	0.729295484888209
Merged-chr14-103717667-1	2.3656294886781	0	1.35614308715719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100465607-1	4.84865565071102	1.57287872505696	0.932646473221263	1.6864683137914	0.0917056331792147	0.580621674811449	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13453475204893	2.17585887006086
Merged-chr1-161400355-2	2.94283202591587	0	1.32616234981056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117853665-3	4.01582410829708	0	1.32573677439943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57791314-3	8.8355831845669	1.51660332368368	0.650840048717467	2.33022434109928	0.019794297123214	0.185787409923352	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81718863411813	2.81959305960247
Merged-chr1-55739193-1	3.3542587105029	-1.11602549584757	1.05186647280424	-1.06099540645333	0.288691988746097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08039093685024	0.82780788634396
Merged-chr11-51800917-2	2.99864957806269	0	1.37116339912113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62672436-1	1.02404542024205	0	1.63376350473836	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128726577-2	2.78931772203772	0	1.35176666140706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67785799-2	7.20643559872389	0.632585343515313	0.631414577421884	1.00185419554013	0.316414017691243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11207496192947	3.05173154897999
Merged-chr5-67255932-2	3.2075034175829	-3.47984906672648	1.22445456871752	-2.84195849779158	0.00448373280005718	0.0598435464772337	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11447469934224	0
Merged-chr16-3233814-1	2.82191894348285	0	1.34487635128212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-56897844-2	4.3803539805078	0	1.34618680688164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77168976-2	6.83757356796357	1.51003325102544	0.736615027190759	2.04996259278647	0.0403680812982896	0.318316959155066	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00095418628208	3.40700426878372
Merged-chr4-129455516-2	3.22874552549652	0	1.33458880150194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36206123-1	3.07629227891269	0	1.37626578476737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180720543-1	2.8505595631544	0	1.35405618802107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84918580-1	2.2693130425245	0.741335779405199	1.5413243096186	0.480973260967149	0.630535502902696	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.423054662900563
Merged-chr6-72165915-3	4.44471817992784	0	1.32332284573123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113954619-2	3.06309050346838	0	1.36074614931203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182140554-3	3.6182221319635	0	1.30863588692864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77890180-2	3.90207509846835	-1.49207665857726	0.888994961609377	-1.67838595606448	0.0932717774582553	0.588371229827894	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91176509230183	1.29948469469889
Merged-chr10-41883867-2	3.76212844427833	0	1.33302448505972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18625167-4	3.94473587229491	0	1.32895699695816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64335760-3	16.5742902140415	0.512259256976329	0.499374119366143	1.02580257388297	0.304984652618149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.11930905903221	4.82204494451794
Merged-chr5-9056238-3	4.24722063954331	0	1.30816929642003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113436196-1	2.90381113967742	0	1.32902423397486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51515511-1	1.61949849445043	0	1.93119756059289	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-69948927-1	0.901871746454989	0	1.65812546987342	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87442423-1	1.64973937307383	0	1.429165757753	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164011173-1	1.62148324279085	0	1.38377325232468	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135545261-1	2.59970404432978	0	1.39231770225384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37135676-2	2.21519919502673	0	1.48699761358476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67218119-1	1.18275567735899	0	1.4674685588713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75850570-1	1.23205490498561	0	1.5740265014087	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63969529-1	1.23813349222929	0	1.53267736922149	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119015512-2	5.51103982860653	2.14647333720617	0.863793437338586	2.48493823224638	0.0129573914938686	0.134655487366148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1893986098984	4.12600408403937
Merged-chr5-105154036-2	7.92782642893776	0.0406933463596543	0.650435908090181	0.0625631916281169	0.950114340796188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71520745752194	2.96006934525357
Merged-chr8-71707940-1	3.47441840224333	0.970304365781993	0.929128604243293	1.04431653632302	0.296338964624456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1954665114589	1.72583980988184
Merged-chr2-70126856-1	2.00797852443248	0	1.35911082874884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32281707-1	1.96597411593714	0	1.36715994177624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43248697-1	1.41205394721698	-2.63066272494714	1.42977001936521	-1.83992018948271	0.065779955450076	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68618281942995	0.306240821987646
Merged-chr16-16854977-1	2.33815360590271	0	1.37020597671873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122951141-1	1.77674824461791	0	1.52299789425058	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95440081-1	1.39342142709909	0	1.83473336369677	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96934881-1	2.08723807098228	0	1.46717301700616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52426635-1	2.29381420396502	0	1.39809104684352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50171648-1	1.53524871790918	0	1.45915552962051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19370154-1	4.76120380263125	3.20275813469131	1.06005703943749	3.02130735945192	0.00251685734909708	0.0387435948961361	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.44027592657175
Merged-chr9-15715040-1	2.17372960318993	0	1.36321883346548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45765012-1	3.09379228977324	0.475692963837395	0.929306895293161	0.511879300849621	0.608735485664827	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72623281344063	2.0295486026821
Merged-chr9-64825363-2	2.06355318469765	0	1.50274973090367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29143102-1	2.67641759429283	-0.439009263169102	1.46669059925433	-0.2993196134156	0.764696190858127	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr11-85505956-2	3.0872993144441	0	1.36867426159365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50991316-2	4.9444438247269	-0.949197499153852	1.08382942621998	-0.875781258739508	0.381148960321214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32799110226898	0.563523181795778
Merged-chr15-36763847-1	1.47707458462323	0	1.41112424992654	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83094480-1	1.383285800149	0	1.60094769511135	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122660126-1	1.27866167359081	0	1.53906659282101	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-92632396-1	2.10476224509443	-1.79390796462883	1.59811996269726	-1.12251145502314	0.261645039823301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21967262844312	0.423054662900563
Merged-chr13-54536004-1	0.990009856792209	0	1.71486579582841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93751951-1	3.31911703730589	0	1.34695299824102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117140625-1	2.88717129507955	0	1.32806375185763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60410077-1	2.03815475491952	1.87760570981325	1.42806267990381	1.3147922260245	0.188579740847237	0.977002437596412	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.729295484888209
Merged-chr12-12255386-1	2.23739372147662	-1.34139005472431	1.27861407379063	-1.04909689500567	0.294133525042405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03394117216057	0.306240821987646
Merged-chr1-149893961-1	1.67449919123002	0	1.47809130230998	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140419728-1	4.02299887930628	-0.0427631760721079	1.61160444968105	-0.0265345358661495	0.978830987652133	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64804129149778	1.79257770822194
Merged-chr1-88263024-1	1.85759137461474	0	1.43541919847208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146675029-1	2.67275990344228	-0.745439368393135	1.36665259097654	-0.545449058023212	0.585444707718482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40215686040491	0.73596151290311
Merged-chr6-146855276-2	6.15116018222356	-0.459646709061188	0.554961005560005	-0.828250461665074	0.407528671360533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66740332454264	3.29482089062162
Merged-chr15-77624877-1	3.14254467633547	0	1.39062405828042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5183416-2	3.39355560976109	0	1.36544012591437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145478812-1	3.79787546226145	0.353642806672199	1.07186134606991	0.329933351891889	0.741450322073126	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16096967916953	1.628416560482
Merged-chr15-101081227-1	5.40605797355635	0.162113701928837	0.584308729639305	0.277445284839249	0.78143821356035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29469364885887	2.79134090178313
Merged-chr12-24758182-1	4.60090146499463	0.712238778816567	0.677393492766172	1.05144024325965	0.293056441007802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44893831798562	3.03764928443927
Merged-chr6-72553727-1	2.32998327460894	0	1.40231698585344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62387767-1	4.71418222254019	1.15103217180401	0.871866379279637	1.3201933222325	0.186770480938956	0.970167237475122	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27298538640823	2.22392366263603
Merged-chrX-35898855-1	1.62448451721972	0	1.59723221391185	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58555054-1	3.0075959074794	2.50441578308672	1.25812926926006	1.99058701222302	0.0465263092803382	0.351887523869558	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr9-37199949-1	2.95174905750486	1.36990127199069	1.31481848912561	1.04189383045694	0.297460904814466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15275625883357	1.98033324113269
Merged-chr4-148632261-1	2.67473040697298	-1.41367037770027	1.31958666870716	-1.07129786259912	0.284035520581592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	0
Merged-chr2-168002147-1	2.46875569863819	0	1.33157138610154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21570357-1	2.13730565107602	0	1.45368011341627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131030440-1	2.51364669974424	-4.100681386145	1.12771498471398	-3.63627462765783	0.000276609431248958	0.00699509283838792	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89714108320142	0
Merged-chr16-3234553-1	1.71040557473011	0	1.48881512637624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99237278-1	2.52644475900457	0	1.34658805793374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79254814-1	2.52266175055735	0.371582811024299	1.41396444066006	0.262795018275592	0.792708575463345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.756654853512478	0.73596151290311
Merged-chr9-106309177-1	6.0653913884891	0.381422895025274	0.657762822178336	0.57987907215872	0.5619961695423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9058407356489	3.07502756578827
Merged-chr12-100327004-1	1.33728887613736	0	1.58146493956232	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67312824-1	3.02720334650994	0.183289173720754	0.986836888025306	0.185734011309125	0.852653355200472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11319023626237	2.06239241693004
Merged-chr19-11411760-2	3.21659112809911	0	1.3437636252716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92788420-1	1.67782069338641	0	1.41020354432966	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58918515-1	1.70458001073306	0	1.55850467860515	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105161377-1	1.86924015880104	0	1.3693648845603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98991443-2	7.98067572360793	1.75603401885798	0.53826688650842	3.26238537586598	0.00110478841435946	0.0205128218497561	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6311802962838	4.14694499545568
Merged-chr1-7937923-1	1.96404439105969	-1.46625879194147	1.32573105417348	-1.10600018557731	0.268726439050921	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16494656592857	0.887107926668329
Merged-chr4-134677047-1	2.2621759933633	0	1.35597782048718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128057985-1	1.38193990245787	0	1.53501710076634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97305505-1	2.39829055609789	1.50138348849906	1.13042565563291	1.328157655497	0.184126029871904	0.960094122886166	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.904678204351698	1.26514550294121
Merged-chr1-155903372-1	3.08506108364083	3.16289005138094	1.15935616711948	2.72814355163989	0.00636918839612943	0.078413694327859	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	2.51134589925281
Merged-chr17-30197812-2	2.77412662876085	0	1.33403966057499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134634119-1	1.33232708828086	0	1.54848452555912	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55830773-1	1.47183897733957	0	1.46000924864339	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166441891-1	2.35165946917713	0	1.34098438609248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149451941-1	3.02308038301004	-2.41234125373328	1.14087301685126	-2.11446954928533	0.034475182904359	0.283908670708033	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02611036422254	1.04220233489076
Merged-chr11-3335986-2	3.0222274962132	0	1.39628837582192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100425992-3	4.84901957665585	-4.01685823796292	1.04822735519304	-3.83204866583852	0.000127080592420637	0.00382858847040983	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51120689374204	0.382164212378408
Merged-chr17-71874302-3	7.65277455095582	1.2232501798561	0.656194342216979	1.86415837680541	0.0622994666144764	0.43586948023443	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65316934224827	4.352251234135
Merged-chr7-97210209-4	4.31226360175369	0	1.31474172513625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109377503-4	5.46597622590687	0	1.30681939547121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153532390-3	3.68980516525861	0	1.32398982663274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83082333-1	5.02138220633796	-0.591911582024761	0.961612486725768	-0.615540657172812	0.538197727759946	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30204454612744	2.97852517626617
Merged-chr6-98016091-2	3.99847949782218	-0.327579042867679	0.877153417282585	-0.373456953382815	0.708808377771487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1723560164372	1.63879159991986
Merged-chr2-154736256-2	7.25055543986843	0.13815647733411	0.516424753034481	0.267524894037922	0.78906504974851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69466753800123	3.71793327318596
Merged-chr5-43897885-1	1.67362594901617	0	1.55107238279034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88953971-1	4.04250660537236	-2.51166279971362	1.02713910365847	-2.4452995614397	0.0144731872507226	0.145928852659422	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18631895658928	0.73596151290311
Merged-chr11-60803833-1	2.80851079924909	0	1.37102359293387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70233839-4	8.05863436407837	-0.369142349682416	0.961364839409899	-0.383977377318066	0.70099521492343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3028564861347	0.994591904006138
Merged-chr6-53635544-2	2.20149199467302	-3.87131232471232	1.32601474716426	-2.91950925356696	0.00350582985617938	0.049705349920134	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77759251130374	0
Merged-chr6-133393608-1	3.1149943302891	2.65161233628752	1.33059848119666	1.99279675556432	0.0462837071874453	0.350458300100904	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.13404870833161
Merged-chr15-83607678-1	2.47901279917941	0	1.33637835575561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-135793136-2	4.04819982458412	0	1.32704747598875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184063182-2	2.99496410186188	0	1.3497947947069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105311673-1	3.26354544929552	0	1.34187181723631	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59354677-3	4.15155031115704	0	1.34795502973574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36271956-2	4.64252025028193	0	1.30988625202638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74975678-2	2.89540578578289	0	1.35779147211557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70817998-1	5.22550385177484	0.0476662657656651	0.669363048808088	0.0712113790125445	0.943229525267613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56939150882317	2.11190195371995
Merged-chr12-25294657-2	5.88555024206544	-0.782800319365961	0.668751704830583	-1.17053954959901	0.24178390799951	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.60563704640049	2.25834536218247
Merged-chr7-98712242-1	1.12994846714076	0	1.48831584335212	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73534909-2	2.76541621108068	0	1.42308748990638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-9031910-2	3.424514532206	0	1.34484009498546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-71768028-2	4.40120306131893	-0.80932908576504	0.868629565550949	-0.931730990818513	0.351475566244583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35868734210528	0.793480537552656
Merged-chr7-109479253-1	2.73322849437911	0	1.34819824903234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73971046-2	7.40360920079257	0	1.30827983683844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122576512-1	1.50924096520233	0	1.48003023838052	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123149095-3	4.20231349220526	0	1.3188811216148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116964204-1	4.67543731770569	0.255428583922604	1.09901378251334	0.232416178929497	0.816214783968477	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760552225909557	0.73596151290311
Merged-chr1-170365837-3	3.52974475864996	0	1.32580405340473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55452118-3	4.13853481595084	0	1.31129448563759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38824070-2	3.69568324185017	0	1.39613440587915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38691529-1	2.65396287151684	0	1.34138217766575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125084109-3	9.25233096339202	-0.159605614935133	0.685560985874888	-0.232810236030935	0.81590876410432	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14680832589698	1.34353547422608
Merged-chr14-31664413-1	2.86245869160934	0	1.33165350736756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173437723-2	3.75637204937014	1.33644949859322	1.09912670629978	1.21591941214165	0.224015622470365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	1.03956264035389
Merged-chr14-13892113-1	3.06598694729816	0.804782854767703	1.21834362456188	0.66055490302016	0.508897797973131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	0.735627456805112
Merged-chr15-50361545-2	5.83729069609439	0	1.31732707007721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-116515321-2	3.09635360653223	0	1.31178192623272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110237716-2	3.54661739094353	0	1.31417918850792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68134276-1	3.44523045170725	0.522417594268526	1.00605925000434	0.519271200246179	0.603571633828896	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63541411635317	1.628416560482
Merged-chr1-157082212-1	4.92977888705592	-0.721677978563058	0.858760243395881	-0.840371901369415	0.400699898598601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16803577786777	1.9450324219075
Merged-chr6-34005891-1	1.54561571496229	0	1.39439939155132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89089776-2	1.80170976825629	0	1.5596691611568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113035940-2	2.77482194206567	0	1.34147413502241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62894303-1	1.85780352295741	0	1.37508864999758	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75733931-2	6.41386199777484	0.773867867378952	0.644397996494936	1.20091600468692	0.229783785270079	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96337440010381	3.52529140235815
Merged-chr2-155596526-1	4.02699126920583	3.48267600012686	1.14747569663125	3.03507604592521	0.00240475044879006	0.0373966736855391	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	3.11448286443977
Merged-chr7-81850418-1	2.02645994441812	0	1.38710148996277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52488944-1	2.85867653376716	0	1.35796765304902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84738348-1	3.78153006064691	3.09298787886196	0.999369009484639	3.09494075712531	0.00196852211991817	0.0320298265881776	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.690044086866801	2.48211543439749
Merged-chr3-137941876-1	2.23429315102276	0	1.39135861993944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-88200808-1	1.92803222861741	2.31899707929555	2.31915813288487	0.99993055514972	0.317344116271312	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.30806904914164
Merged-chr14-69251496-1	1.6495048604522	0	1.51312224907767	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91253192-1	1.8040712326773	0	1.45851284646471	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87597320-1	1.94562576880386	0	1.36672636174577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85848392-1	1.53800179475787	0	1.47850461870597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17728531-1	1.37638985101676	0	1.53261302389718	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91612129-1	5.95808194504163	1.61219837320375	0.689695084870961	2.33755235983069	0.0194104817477928	0.183180851639918	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52812561733901	2.94640134381309
Merged-chr12-13242673-1	1.79277177841146	0	1.48604127579986	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54669405-1	3.26078489116427	-3.48824364410727	1.17040615714047	-2.98037020979941	0.00287900211290976	0.0431098240307519	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01298100360391	0
Merged-chr4-133579819-1	2.93514943770138	2.83901296272371	1.31339531677293	2.16158297998145	0.0306503345275542	0.260961141372972	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.68820016584178
Merged-chr16-75982224-1	1.56592942729059	0	1.45754204594013	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160267534-1	1.98906933485367	0	1.38532120957536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87247460-2	3.30396294566112	0	1.39485502343263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100458215-1	4.32792861062003	0.487934929075191	0.927747070621594	0.525935294787051	0.598933165005957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35598347433364	1.43116362910629
Merged-chr12-17551396-1	3.76468513365642	3.15097924378867	1.16469470060089	2.70541219270854	0.00682196810631554	0.0825075565195809	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.46894927517136
Merged-chr16-30374487-2	2.49534371656486	0	1.40203461140491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100322992-1	1.99603380903269	0	1.47288007989334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18430361-2	2.37478409719677	0	1.37278936075217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-17007561-1	3.48528051479965	-1.4848958143463	0.961652048435165	-1.54410924072025	0.12256187060894	0.720162575021292	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26808007904939	0.666688015277142
Merged-chr3-43215879-1	2.43502619230564	0	1.35086994411275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25727033-1	3.55645200778644	0	1.35259415627291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14986775-1	0.893329793167648	0	1.89464391921549	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13753904-2	1.86510185274785	0	1.46990248949374	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57399018-1	1.87219948906545	0	1.41953293283618	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111792287-1	1.43851176987538	0	1.46000372289334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55178788-1	2.61318106566846	0	1.38520480109448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32217532-1	4.51883910641939	0.301995493278838	0.878066324764348	0.343932439682033	0.730897095069448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96536273019889	3.05747649908318
Merged-chr9-118867143-1	4.1979829419182	2.71702262107422	0.869072517822987	3.1263474167614	0.00176992324125796	0.0295119683907228	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06360538524082	3.50729200753228
Merged-chr2-90549712-1	4.28825001992691	-0.607265309960523	1.04083990893715	-0.583437764776553	0.559598641376846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63802462084879	0.683637474991079
Merged-chr10-81198437-1	1.82188317502941	0	1.36359980464166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126588512-1	3.75181620623882	2.62292374836562	1.2727834057311	2.06077776985078	0.0393242462233127	0.312613405560656	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09438939399008	4.06445977735281
Merged-chr11-59216945-2	3.60618022803259	0	1.34290001365858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103088731-1	2.32225514278879	0	1.33985612957495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36229514-1	1.5933721018114	0	1.43914956667586	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37081281-1	2.86983891223418	3.16141236931551	0.970809448698039	3.25647053966699	0.00112806636187456	0.020835111498885	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.970500726884725	3.21392713144676
Merged-chr4-129794891-1	6.76147706121573	1.08365677284727	0.761389921469683	1.4232612519424	0.154660435160706	0.847998053029996	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2032517255992	3.55677850945328
Merged-chr3-127933242-1	2.86577861161913	-2.47758914388334	1.28546733618474	-1.92738397479379	0.0539317952460436	0.39158078801644	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49809838453554	0.683637474991079
Merged-chr13-49364883-1	1.71169939001022	0	1.40525545086304	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57659937-1	2.17381617091783	0	1.36973501755969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155821226-1	5.60022231897034	2.33282862015772	0.69270556283419	3.3677059133364	0.000757964009363939	0.0152964534144212	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52186958976732	3.67397425015486
Merged-chr19-16048204-1	3.89764695958763	0	1.34447786580314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32550050-1	2.46109015140728	0	1.37038520253171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145744648-1	1.75838275988994	0	1.39477256085259	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158232478-1	1.15060805619233	0	1.52352094342479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173753596-4	7.07693811191985	-1.78480896014573	0.741175959636261	-2.40807724122844	0.0160367876743367	0.157727261795185	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08684883455921	1.29684500016202
Merged-chr10-127580018-3	5.63266173272197	0	1.31786146651747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100612317-3	3.80015622193588	0	1.33699044750215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23782131-3	8.28121584279955	-0.912148561628888	0.588852761898029	-1.54902654899468	0.121375338088712	0.715765079211712	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78371898375421	2.95895410867937
Merged-chr18-11700969-2	1.99853317547614	0	1.4372403668068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-43515265-2	3.18486590028625	0	1.33522655276494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4346336-2	2.69532244287583	0	1.38068403150935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85610730-2	2.75857428554035	0	1.34419696310549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91724452-2	3.30771606403646	0	1.33859881221879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96562573-3	6.28946301467941	-0.22584828634995	1.13983504067976	-0.198141203147484	0.842934588395766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	0.469435083901436
Merged-chr3-115762847-1	2.19763797957638	0	1.37799443713742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29041719-3	12.4797316710692	1.40606239080345	0.42439605695641	3.31309013775279	0.000922712371902944	0.0179290998080196	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17449220120154	4.50764729878738
Merged-chr4-6221690-2	8.24952236805797	1.38476215237245	0.722298466931201	1.91716058633743	0.0552175335452929	0.398701099121626	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83253181737868	2.9451013333373
Merged-chr11-121753149-2	2.60811432279845	0	1.38841278006539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165907360-2	4.23341005506	-1.03761491715061	0.834033724384206	-1.24409227926211	0.213465602272708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08584200154809	1.20539659680455
Merged-chr14-73403572-2	3.47410085510005	0	1.34993964804369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30769384-1	2.35523699153016	0	1.43547107359307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77017404-1	6.03775453497224	-0.324167167582376	0.71596299598173	-0.452770840674353	0.65071376265387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36755921954049	2.72349343048033
Merged-chr12-111587525-2	3.84174204416775	0	1.31006685346817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51502390-2	4.39465896278872	0	1.31898825016237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74990392-2	3.75233603297041	0	1.37202602967464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30975727-1	4.01922770338827	-0.491743100752746	0.686925825020298	-0.715860552685168	0.474077458214626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03315799536575	2.36515869754542
Merged-chr1-180421357-2	2.44227122653099	0	1.44325876804387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125137510-2	3.06320849446064	0	1.37571741743646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136165456-1	2.17965475336386	0	1.43734012043708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74685345-2	5.05247184555209	-2.29039095695615	0.874182063794813	-2.62003883609049	0.0087919753876333	0.100387982470782	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41757022491388	0.82780788634396
Merged-chr11-100408258-2	3.43583193606042	0	1.34435356004869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18987975-2	2.6291589310201	0	1.53360941995167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39253972-1	2.04530521256269	0	1.35558651657469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80345151-2	2.59936218561091	0	1.4119931296799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93812670-2	5.77054715115931	0.397938020879711	0.637289723265453	0.624422466505013	0.532350174396995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56742711965939	3.07454628738135
Merged-chr2-158284755-2	3.34974735354377	0	1.31479054719895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141507081-2	7.75871218904221	0.779976675440797	0.615557978623695	1.26710513473438	0.205117699808652	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43728793824139	3.19371587707237
Merged-chr3-104434600-1	5.30321643512758	0.120737478054107	0.759954922341139	0.158874525981304	0.873767731075764	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71623752344672	2.10380936944073
Merged-chr9-23581181-1	3.30340495064547	0	1.32454167050567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148074736-2	3.89023157409227	0	1.33134994945398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108983286-3	3.87672580330805	0	1.32896892490323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84363938-2	5.68930638608177	-0.237593510756297	0.596591422603863	-0.398251637141051	0.690444706185916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20156903499609	2.74150245469487
Merged-chr7-45562293-2	4.25259555842924	0	1.31707256771632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41558646-3	6.58327484991166	4.39476622266714	1.06638531644225	4.12118036033099	3.76936178296845e-05	0.0014583346066895	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.31260716574699
Merged-chr5-24387953-2	4.97332489693706	0	1.30043799124618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117790439-2	3.84309460104117	0	1.34790144382651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87152757-2	2.69252025430571	0	1.35365892525325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79866069-1	8.00617441143964	0	1.2997640364633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-40869253-1	2.36486628940597	-2.07324766790975	1.22950657205843	-1.68624366475629	0.0917488768001808	0.58078292195918	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21184583582891	0.688405034366054
Merged-chr16-95825849-1	1.58922502914403	0	1.44145051472644	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34849011-2	6.01167447332827	0.0966562370117591	0.63589908795257	0.151999332666079	0.879187461991448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52030398382772	3.44421987247085
Merged-chr10-117837614-1	2.61359742950878	0	1.38549325390295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-44173351-2	3.28350081331961	0	1.3166013698514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-6467167-1	2.37721454206783	0	1.40230320954588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-3944087-1	2.02433307572865	0	1.38171462160737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120404761-1	1.78051646729988	0	1.4129265426181	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36552488-1	1.69112850274958	0	1.42240991564358	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133601057-1	1.99876458474976	0	1.40890837709908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134118931-1	3.98270504013033	1.06679189823846	1.00614586146284	1.06027559134164	0.289019240318279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46424645985996	1.58321107267933
Merged-chr5-89731975-1	1.74090187357067	2.90823374487811	1.44792101663659	2.00855827870619	0.0445839996660837	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	2.9369578304866
Merged-chr3-105078100-1	1.7951667890587	0	1.46323756284363	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72942732-1	3.60456649274344	-4.419654119044	1.3947279058813	-3.16882891667053	0.00153054459108469	0.0263744886180027	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60170276000433	0
Merged-chr14-89936870-1	2.89065639755144	4.04974568313074	1.32242352867006	3.06236662864241	0.00219594309015234	0.0348122506475241	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.93054380367147
Merged-chr11-63402930-1	2.40915829675548	0	1.40126232941963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-33824740-1	2.84765288787485	0	1.32738169724867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8691193-1	2.18784519935601	0	1.44318448295439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135681480-2	2.58833018370787	0	1.35536921655149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50995974-1	2.39407973825142	0	1.34885449775346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61097915-1	1.41706528385608	0	1.46369068739291	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142708227-1	1.84367520027863	0	1.49245545366657	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68143085-1	1.61394721546692	0	1.4775674770848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117537192-1	1.14413883844231	0	1.67000524542574	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32692580-1	2.18000958872154	0	1.39071244303988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141385400-2	2.89095010012592	0	1.36519320285296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41044768-1	2.50778957952106	2.51473161073479	1.31502817244287	1.91230246121898	0.0558374103334772	0.40218989399317	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr2-36009541-2	2.72928298969792	0	1.36217699145742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12174481-1	5.12340547611232	1.81766597624322	0.853339470722291	2.13006199596591	0.0331664953764172	0.276335306243448	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35083392992384	3.39189787604781
Merged-chr5-135712442-2	2.73388820923624	0	1.40842530636336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26451684-2	8.1137585124568	0.885799119496734	0.78688622590276	1.12570164572457	0.260291826928673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90632681207597	3.13173672580165
Merged-chr5-16832036-1	1.36254866055972	0	1.56228971606216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72814148-2	4.45810559094093	2.34049159105234	1.02903525634058	2.2744522858969	0.0229388068093089	0.208681507693318	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.81683205337095
Merged-chr5-150220484-1	1.60501266752511	0	1.47868313320649	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164377645-1	5.35123837327284	0.0958555581736649	0.599853571861806	0.159798261892734	0.873039993296395	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81473926499797	2.4360226934973
Merged-chr19-21479576-1	6.20121628231753	0.672239923926433	0.652381001604283	1.03044068155467	0.302803184472438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11678946562146	2.89017604405251
Merged-chr7-74692583-1	4.57977194924322	-1.06203440228073	0.710119483979325	-1.49557141613601	0.134765376506355	0.768579009703639	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1414347437095	1.52944205045577
Merged-chr11-15726057-1	3.47732618874517	2.53686534289856	1.03022132116659	2.46244694297909	0.0137992587941168	0.141041006056752	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.93839751767718	3.80581250207881
Merged-chr2-90559834-1	4.99510271047378	0.524373743703698	0.728745562172326	0.71955668881274	0.471797986930047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4317474957531	2.96191553276564
Merged-chrX-38642356-1	1.53984710667861	0	1.36963917970911	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45093966-1	1.35137173740048	0	1.52537674368987	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52537772-1	1.1430986348791	0	1.46050756186806	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20088542-1	3.10593497254259	-3.18580846906043	1.37480861640286	-2.31727415078033	0.0204888024807351	0.190802520579466	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33009160799537	0.306240821987646
Merged-chr10-53471441-1	2.43107592341356	0	1.45243583693648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98349284-1	2.39646643072232	0	1.34356613594938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29380633-1	1.08929995637436	0	1.6097462553416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70580840-1	1.39050889603813	0	1.4388001937623	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162414040-1	2.65623580207818	-2.47872550254105	1.08352471034432	-2.28765018358776	0.0221579009416324	0.203018815890621	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28225302474046	0.61242769162773
Merged-chr11-107467357-1	5.21180338355474	0.152381250032467	0.698235797140746	0.218237521846437	0.827244051378424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21269825566354	2.37528155229931
Merged-chr15-41163034-1	2.68621947943943	0	1.373899837577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-106369300-1	3.84177998201139	2.93737259117212	1.09533861276228	2.68170276930574	0.00732485086544634	0.0869639725024449	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00113496145082	3.70689461397317
Merged-chr11-100169265-1	4.15680649425762	1.09704948153329	0.888979684018686	1.2340546148074	0.217182553814032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58544803634827	2.74582788910746
Merged-chr19-11601012-1	6.15694988387604	-0.357142791549556	0.668969031310115	-0.533870440684114	0.593431174284167	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79736446853909	2.47744888713631
Merged-chr13-34200557-1	2.24073092923424	-0.219243296635662	1.31968165463892	-0.166133473072829	0.868051912473422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.306240821987646
Merged-chr13-9611417-1	1.5330397989578	0	1.47162738231183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167463149-1	2.87741957819371	0	1.35021750280968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29290792-1	1.36617872278096	0	1.56568808902204	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25364739-2	2.29068336667126	0	1.36965217234233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75158736-1	1.58147992190635	0	1.53153885482777	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4227086-1	1.96316954476146	0	1.54008880190214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26605316-2	6.43946774555171	2.22366660017166	0.94945844000026	2.34203679328087	0.0191788241263526	0.18150028115288	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55111954117765	3.94995032246061
Merged-chr8-104028853-3	3.71941826194106	0	1.32138683060197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52600708-3	4.16604394167994	0	1.33507618977192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29406134-2	2.7454128335912	0	1.32438413320364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74313505-2	3.21022368502868	0	1.35907259255431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54731589-3	3.6209797865298	0	1.33462670612992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92403180-3	3.55289284346844	0	1.33292767238839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-141228380-2	3.23545471187614	0	1.33220980108691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126848996-1	4.21325018056607	-3.90990560665169	1.0532384242084	-3.71227019142443	0.000205408538039428	0.00558113360778563	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35459871142023	0.306240821987646
Merged-chr3-81099443-1	3.01664743572772	0	1.31258398013632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81548851-5	15.2271469947559	1.6068917147961	0.499340308306014	3.21802924391863	0.00129074657078836	0.0231844764746388	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48951883622034	3.97025883310709
Merged-chr6-134078535-3	6.60144203441569	-1.64176778581296	0.731855551904718	-2.24329484355228	0.024877807674642	0.222024750110237	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51876945140559	1.87822650685341
Merged-chr3-103841108-2	6.73583431290066	2.51871694177438	0.967427387820856	2.60352040213356	0.00922717755945984	0.104246048547798	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	1.69486619385668
Merged-chr15-89339876-2	2.30374658370837	0	1.35111083640549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110816273-2	3.23170909670451	0	1.31149873532612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34156417-2	5.1886299485465	3.55929564283692	1.05000713215663	3.38978234893169	0.000699481352084829	0.014297250057346	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.75261347666835	3.75898897381162
Merged-chr15-3202458-3	3.42847111695982	0	1.33444343655128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19527493-1	2.13244516664197	0	1.43730666135822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37757158-1	2.35644001135467	0	1.36187843257321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116619744-1	4.08332876820006	1.29315157066246	0.93256842715644	1.38665596325783	0.165546694693389	0.88816209453483	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12599138314075	2.68333779073552
Merged-chr14-46916749-1	3.170712838424	-1.09056453450836	1.28542945426652	-0.848404812017203	0.396212563702356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0.306240821987646
Merged-chr15-37906279-2	2.92933330202772	0	1.37311039432274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80129678-1	3.01981619149227	0	1.33881596136948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77879257-2	1.79661376133921	0	1.57342469830161	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121291891-2	5.61018470673203	-0.341859198102516	0.702034618165548	-0.486954901164008	0.626290291153299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22041079482005	3.03459680081336
Merged-chr6-120539294-3	4.64782700349841	0	1.30156851461013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59220189-1	1.73126654916401	0	1.42443138567348	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179760809-2	2.17544005554933	0	1.38151403350103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155218276-1	3.63781388422007	0	1.32379784439311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14810351-2	2.20093141390611	0	2.25814504907827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65126314-1	2.12186706054064	0	1.35551950042119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24118387-1	1.55546594545243	0	2.34763936923208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58274013-4	10.3972824801522	0	1.29579770974052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170153016-1	3.04461793114772	0	1.35687885711241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126873374-1	4.50519998884233	0	1.30225291001846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84532494-1	2.41944048700509	0	1.3424337831621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22418492-1	3.09850558592164	0	1.34121909675051	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83771613-3	2.93215035712192	0	1.3461934159604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-25849406-1	6.63898737929946	1.58110946639353	0.665186857575962	2.376940326445	0.0174569119852139	0.168499168476482	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41664166216432	3.45499105887688
Merged-chr16-45192763-2	6.57327611644247	0.928952567635203	0.570392787088151	1.62861906507882	0.103393685739749	0.637260613824509	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46999519052986	3.21068215388718
Merged-chr12-105721729-1	6.09349360434513	0.940422927904204	0.632738645205172	1.48627389054016	0.137206689904718	0.778560989797993	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89234612949567	3.1331985207636
Merged-chr2-92486556-2	3.95338343293915	0	1.31188794569355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155179207-2	3.85237826884103	0	1.32937736137177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86449817-4	6.15386652384522	-2.62791017916572	0.842065508031038	-3.12079066783111	0.00180366197760603	0.0299751006074882	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29313079331054	0.683637474991079
Merged-chrX-164454396-1	1.69908411314893	0	1.46800275479383	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107820139-1	1.99854637007024	0	1.49388879422106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60670661-1	1.53303740208964	0	1.49566556795195	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16694511-1	1.98798443773113	-1.66472610629257	1.35387303023027	-1.22960282768128	0.218845870632551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36935319716101	0.420961122473315
Merged-chr11-86653614-2	3.29683335246186	0	1.33726370853296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106439479-2	2.71652221696497	0	1.34008687188224	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101641825-1	1.20230966207442	0	1.68229044830261	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21856093-1	4.62240775324861	0.114426669970794	1.0807812180658	0.105874036352682	0.915682294252663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13797159150082	2.56821354400587
Merged-chr2-145882809-1	4.63087242493327	0.367492641124575	0.875788264342896	0.41961357109564	0.674767772707831	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17313615400422	2.27306840521062
Merged-chr12-33311883-1	2.39095462560962	0	1.41756338314991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69257267-1	2.17594451438652	0	1.39038644878492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132338183-2	2.76973480917675	0	1.35546040957657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109671730-1	2.55791932185821	0	1.34506499176966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57855882-1	2.95720466184533	0.143533709064253	0.928874023594442	0.1545244084971	0.877196267149178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03861962704105	2.51338990754334
Merged-chr6-37396295-1	3.13933102632675	0	1.43037448805012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88310951-2	7.18073373509876	-0.156153087045396	0.758689524370724	-0.205819484821427	0.836931920359217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80415866370548	1.95933272142179
Merged-chr8-35737607-1	1.91501292959403	4.36849534061894	2.1573865213071	2.02490156375511	0.0428774730137604	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.24003128049356
Merged-chr12-91774882-1	1.8472427613747	0	1.43646780058492	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-84079083-1	0.863655866732799	0	1.71944818888115	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116906941-1	1.75567095851325	0	1.5674458206236	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19063011-1	8.35500337260647	-0.566843053716284	0.581110696304519	-0.97544763385192	0.329338265261485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44997527042137	2.41396759389214
Merged-chr8-85499340-1	2.13594014277511	0	1.35111577172288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106026990-1	1.30159116477072	0	1.51144993675053	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31366652-1	2.65850865308969	0	1.35924496850005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124037509-1	2.16754624384503	0	1.3757133301863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114698759-1	7.42680423827567	1.36664629673122	0.611601520496672	2.23453711433122	0.0254477533327161	0.225448602125768	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2486164987203	3.4429599984065
Merged-chr1-33234355-1	3.36312828791538	0.422514647651458	1.19845800465501	0.352548563245723	0.724426904989415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6346487204478	1.63879159991986
Merged-chrX-152159523-2	2.52238973014053	0	1.43541277824428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71865634-1	5.40537340217781	-0.326562076715755	0.559838032259721	-0.583315276737498	0.559681080321068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44459101785781	3.0849014692737
Merged-chr11-35297998-1	3.88117292266829	0	1.33955757529262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75216627-1	1.766469687317	-0.557067376797719	1.29412736445829	-0.43045792253292	0.666862568689453	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69444119359774	1.40264952818025
Merged-chr10-122683294-2	2.72359941677319	0	1.38233910363512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16801166-1	1.69090410111325	0	1.50590351866424	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21662619-2	2.84346983548855	0	1.34796861063375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-42835019-1	1.44983315952858	0	1.46802848608328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130862225-1	3.07098671936158	1.42649809814946	0.963799908459898	1.48007702182596	0.138852692976672	0.785022309849837	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.91040095767016	2.575641413063
Merged-chr12-99333649-2	2.86076085767131	0	1.35196519167162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87256865-1	2.87903025698375	0	1.34986239583411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-54614345-1	1.89313649332719	0	1.37565407271968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30041674-1	1.18492300061164	0	1.85779861199678	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34587380-1	1.48797096078472	0	1.47848334458746	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-31468070-1	3.14232448731732	0	1.33746714815804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135309931-1	1.90073075842803	0	1.61931860197347	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61238169-1	1.05286379480844	0	1.63214249051433	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90313568-1	2.22070919276529	0	1.43028963029621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80654081-1	1.57613673314565	0	2.21189809020471	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161998315-1	3.02947869024251	-0.211728149123953	1.04766301332983	-0.202095660942548	0.839841939947702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47580631078572	1.1517642783294
Merged-chr11-64493727-1	4.23624432803169	-1.09475388478865	0.994828153120368	-1.10044521896053	0.271138185552707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16008390459465	1.15307255889252
Merged-chrX-99001439-1	1.29665136777996	0	1.58365013501397	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82785936-1	6.08808492237899	-0.221253226821079	0.652732591051698	-0.338964577308129	0.734636415301162	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6268803953205	2.98808453458533
Merged-chr1-131181828-3	8.31372250293246	-0.85841426563621	0.554803893301017	-1.54723908033296	0.12180560552916	0.717594547665935	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37484220993248	2.09962039219792
Merged-chr4-6341116-3	10.6714942317945	0.461164916686331	0.434539795236258	1.06127199796649	0.288566307612099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.0129017685385	4.53480605342355
Merged-chr6-53684539-1	4.40093107395285	-2.22259278927787	0.919252220989303	-2.41782694512927	0.0156135004189158	0.154424065139166	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5970446880528	1.17564474993106
Merged-chr16-32458183-4	6.32997804316829	-0.919738847732998	0.724583228089539	-1.2693349943498	0.204321610308346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38230291494511	1.34389275758327
Merged-chr16-90197019-2	3.0565927583282	0	1.33531017266075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41028697-5	7.21907582125174	-1.62561063040852	0.652143103688571	-2.49272072527324	0.0126768511130174	0.132668403720569	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63075144978844	1.47954504644696
Merged-chr4-41469310-3	4.12162895898813	0	1.35551616986403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155071275-1	3.90169858894969	-0.636455658629788	0.94442603826938	-0.67390736049174	0.500370212295374	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9048914536057	0.735627456805112
Merged-chr17-26583791-3	8.79495215169208	-0.781352479060686	0.535610935386114	-1.45880606133894	0.144618493851134	0.806816366361836	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.84091793502037	2.63063970350352
Merged-chr2-132230004-3	6.08851443423275	0	1.29861953708964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57182174-2	3.30756738522377	0	1.37399574004418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107268207-2	7.16550982472551	1.04325077627507	0.73457799967024	1.42020422166658	0.155548234974988	0.850938046268361	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70036147737097	2.543490698388
Merged-chr2-128948366-2	2.66291604853634	0	1.38926984095875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75436855-4	5.28461266301531	0	1.30293046636863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120381187-3	4.87836138887809	0	1.30902135825075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45447768-2	4.50911117447823	0	1.33682072825093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122244025-4	10.646308563623	-0.596257277348355	0.483656121320056	-1.23281242822064	0.217645753402116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57108932032086	3.16509856899259
Merged-chr1-177487986-1	1.93983100255195	0	1.3900534062111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120088741-3	3.82528838473894	0	1.31268476928308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28038338-1	2.59653321259818	0	1.35334489345528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183442293-1	1.86211341436213	0	1.3747245917831	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81199298-1	2.92451519771877	0	1.35895360332998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38388464-2	2.51498177020385	0	1.38073758445516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-49431435-1	2.91419044961745	-2.02301572022768	1.26538514300367	-1.59873516092153	0.10987946145347	0.66610757727751	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12172433254642	0
Merged-chr2-129407885-2	5.4160504678836	4.20497372138132	1.03515880138457	4.06215328098159	4.86221325383724e-05	0.00177798649851846	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	3.18877323851778
Merged-chr5-66125180-2	11.9060356501556	0.76701697902406	0.544112098166244	1.40966720205091	0.158637973547086	0.86278460419541	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82795905868982	4.18826825060894
Merged-chr1-137899554-2	3.112629158081	0	1.34191178332724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85359807-2	6.15886813721074	-2.39062260269601	1.07288331428676	-2.22822237130722	0.0258656899639864	0.22840030271204	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91891759765072	0.306240821987646
Merged-chr7-126144018-2	2.47897666833871	0	1.51195678987126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123545813-1	2.4437467195231	0	1.36033168315791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17273637-2	3.37191137258421	0.642145813470307	0.97319905429023	0.659829878214005	0.509363007318021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57469572201091	2.22017310661124
Merged-chr2-105428139-1	3.77445549940724	-0.0263563785753437	1.00760326274327	-0.0261574962585835	0.979131717343798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52638371361314	1.31734301959449
Merged-chr10-19558461-2	6.64319884242495	2.05164647329758	0.815274857649143	2.51650894670483	0.0118523890967764	0.126182179523942	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04612588095749	3.55970492020469
Merged-chr10-52385445-3	3.63928430385332	0	1.31187452207626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134156267-4	7.70771493956316	-0.15165643996794	0.768714939155587	-0.197285667603299	0.843603994533072	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97159027402276	1.22548804685604
Merged-chr7-101863635-1	2.83255497282953	0	1.31441158335223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75291085-3	3.3944414140884	0	1.3559372229827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86591612-3	2.98371382428265	0	1.34096271675926	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96483433-3	9.16710635468047	0.841888477216926	0.561249728278046	1.50002473907631	0.133607994365252	0.7645302401087	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0325609646371	3.71626589531435
Merged-chr3-90460508-2	3.83509580563936	0.450563723702948	1.23524334085061	0.364757055393377	0.715292764419792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.609949614787909
Merged-chr5-99284524-2	3.72838704114086	0	1.36395548491745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124614683-1	2.61019843178058	0	1.34715084070916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127626666-3	4.52821139055983	0	1.32754619233136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13027686-3	8.48127099307777	1.1784645010567	0.592158751933005	1.99011582149178	0.0465781783293992	0.352110109758769	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64107438222285	4.00063803781024
Merged-chr14-64842741-3	3.84425553772317	0	1.34273118479908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106556046-2	3.33259781226407	0	1.33401766717403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-167415038-2	3.72808908542616	0	1.32246438309503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-133186488-2	2.91197826980536	0	1.33037586136307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27493237-3	3.66992312931954	0	1.3300500150342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10767320-3	3.38288680473762	0	1.32671003958626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13542677-3	7.02585816634282	-3.34020339549578	0.851713506713108	-3.92174524551822	8.79099106277862e-05	0.00285941315076322	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.90626525115726	0.581381506691384
Merged-chr17-75536813-1	1.59159169373669	0	1.48695582483379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136700146-1	1.48541028305924	0	1.53958876359819	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47471934-2	2.4844794854691	0	1.36302506642558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65193366-1	2.4857808503872	0	1.33528547010357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25048976-1	1.57336111012759	0	1.52746642666014	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80167921-2	4.50229047661161	0	1.38584791951802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73231701-1	1.94519911429077	0	1.47389557977921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47653535-1	3.5498079435251	1.68889113888711	0.884984380523725	1.9083852506952	0.0563414417475675	0.404937071319462	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27919412398068	2.58111491336869
Merged-chr2-51072694-1	1.9364361778253	0	1.41785854532557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40470382-1	1.42812221072773	-3.85590279860433	1.53398079249761	-2.51365780944767	0.0119486306762279	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63447376716755	0
Merged-chr7-19477248-1	4.79278719126621	0.939587838954065	0.80001334623898	1.17446520532595	0.240208740875884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48775766656407	2.17540470129796
Merged-chr10-78279338-1	2.15412025927939	0	1.39080658162797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79495648-1	2.21959238509999	0	1.40913157914832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31171028-1	3.79759129282107	0.823725911171326	1.10565372964249	0.745012555999492	0.456264129440123	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32995403069406	2.41685582892305
Merged-chr9-103996719-2	2.53395103363055	0	1.37093370418548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15366145-1	3.00596635953155	0.603444861818031	1.23075275041206	0.490305515560292	0.623917724650248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13899832209312	1.60572551668653
Merged-chrX-57271048-1	2.44531464922729	0	1.38298980911171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116180897-1	2.0651234512404	0	1.52672101774746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102057575-1	3.40127374660271	-0.394025907351373	0.922607865811709	-0.427078417551437	0.669322212214018	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24850212104712	1.52572753666912
Merged-chr2-126073415-1	2.45746370192298	0	1.35332858289452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35117521-1	4.42062263493338	-1.44420328727601	0.781300248863006	-1.84846131737152	0.0645356353848098	0.447157844327832	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06189522237573	1.72320011534497
Merged-chr5-110434914-1	2.40353989131681	0	1.34395074367603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47396522-1	3.88262689831299	-0.285841188145135	1.08998183635074	-0.262243992158741	0.793133338986219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96795512062249	1.47158896970822
Merged-chr11-54486269-1	1.84068826623928	0	1.38962646347941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130795574-1	4.41891406367298	0	1.3647563428786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102784863-1	2.44818769144231	0	1.35360294909474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110659902-1	2.68317407942221	-2.85789259563018	1.09050239395501	-2.6207118952442	0.00877463811882232	0.100228924650301	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57505967452304	0.73596151290311
Merged-chr13-28513225-1	1.20999087617182	0	1.58290144733006	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35717826-1	3.89216812690882	-1.09362740606601	1.13851827654031	-0.960570795041858	0.336768018958457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80319279895908	0.735627456805112
Merged-chr13-118052993-1	1.98090065511734	0.991227661427734	2.33679807202028	0.424181992143964	0.671433092766891	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.843323834477631
Merged-chr8-117502373-1	1.66547095389158	0	1.47090458135852	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55020699-1	1.78114718742489	0	1.38294997107648	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-119764009-2	3.35788244283915	0	1.38071647849114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163788683-1	2.32060124725179	0	1.39253727425557	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54528640-1	3.44719442066485	3.20759740507823	1.14262506995806	2.80721777371466	0.00499714464534882	0.0651003616417392	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.898163539755574
Merged-chr2-130961954-1	5.4217565450184	1.56418035081281	0.731833694112003	2.13734399413076	0.0325700230554296	0.273036655109699	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03354637291052	3.6865887084064
Merged-chr19-3357841-1	1.81307766434655	0	1.38021729343289	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36826352-1	3.45281689594349	-0.597398007945272	0.886113645331727	-0.674177641990412	0.500198382228953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07931548979872	1.14490468848716
Merged-chr15-100102337-2	2.45386099929951	0	1.50092487545971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34954211-1	2.87104800098679	2.42682860649309	1.04332984985742	2.32604157431586	0.0200163329057932	0.187390729235238	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.674898740693665	2.39918060752532
Merged-chr17-28283415-1	2.92882378224066	0	1.32007465261589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40431721-1	2.54274343189868	0	1.39819143914731	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65497239-1	5.2622311508459	0.319059076934791	0.670658532889582	0.475739979867402	0.634259634445913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92358237564936	2.79312270807505
Merged-chr7-125588921-1	2.55450665114758	0	1.39566501930193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69198339-1	4.04104001395847	-0.236631612251525	0.835044895102114	-0.283375916240513	0.776888688124415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69821907749914	1.69736543272236
Merged-chr5-140963060-1	1.66774906770866	0	1.43790049969359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191086286-1	10.9167017943103	0.457876444551297	0.518837595454831	0.882504368539266	0.377504118415663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27469629277796	3.50131090737978
Merged-chr1-14579026-1	2.17067481474787	-2.6396471139569	1.35687468378432	-1.94538754794579	0.0517283522862266	0.380015841314869	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29014418030098	0
Merged-chr17-29440088-1	1.56139174489055	0	1.43689090827983	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24525275-3	7.04998360612024	1.14539763625847	0.696698359123032	1.64403664980672	0.100168632182486	0.621675319460229	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23327051513385	3.49051861592046
Merged-chr17-48331051-1	1.91715088035169	0	1.39233688556242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19305565-1	2.57566106662574	0	1.36941437556334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25030277-1	1.5876531428286	0	1.45510392614721	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108539105-1	3.02364562489276	1.59697237268771	1.3018330323045	1.22671059426166	0.219931384390345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	1.31016258956889
Merged-chr16-30596103-1	3.25962426438387	0	1.39955108540177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125139287-1	3.2476568579556	1.54705231236595	1.0574166572856	1.46304893317763	0.143453989807838	0.802787053008732	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59499362021986	3.44452714682857
Merged-chr5-142932049-1	2.61074070547631	0	1.3430789417966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84341604-1	1.01648539778264	0	1.65255720810385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100112082-1	1.9211212356068	-1.48708764403697	1.37164197376975	-1.08416603783998	0.278291186964617	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79093448657121	0.73596151290311
Merged-chr6-43542049-1	1.94868659992858	0	1.36287490525645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68953037-3	10.0308894610517	-0.634645235121802	0.665369694346481	-0.953823476654049	0.340173003705694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32769225794814	1.99834080004871
Merged-chr17-43012932-4	9.82832327978376	0.849909377364649	0.54493192728146	1.5596615555353	0.118839881670217	0.705738674961877	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25744871503901	4.16109431507429
Merged-chr12-52504644-3	12.3582337596357	-1.56455011851121	0.891696836710996	-1.75457627985092	0.0793318117170711	0.521931319013228	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07561507864902	0.683637474991079
Merged-chr4-9665883-5	9.54414395762204	-0.631047209160641	0.560950628820397	-1.12496033828797	0.260605841429596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20192178835099	2.68099393481061
Merged-chr2-84246704-2	6.27259063572209	0.641640498765069	0.840650120693922	0.763267003679749	0.445304176207095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07945930499031	1.54311005189624
Merged-chr5-64866840-2	2.62186548620823	0	1.35497270873912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8808004-3	4.56979262651147	-0.701234866719861	0.772045967221911	-0.908281237765088	0.363729652668501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61913155801902	2.26328071717007
Merged-chr2-129388703-3	9.27332830319218	0.877764308015386	0.513175379021731	1.71045678319306	0.0871814384748248	0.55885405911084	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67553267416465	4.63331971149821
Merged-chr3-148987011-1	3.58734229663036	-1.2528839884707	1.20820876104451	-1.03697641406571	0.299746849368584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	0
Merged-chr1-31154136-1	2.55554573787898	0	1.36812583451314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120247427-2	3.1621901781265	0	1.40118353643502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103338405-2	4.81144819222446	0	1.3408228272974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189080994-1	1.725379594685	0	1.37316505710783	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67831410-2	2.97017124764421	0	1.33895101048189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-85218306-2	2.77498565705378	0	1.38459025523699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65105207-1	2.69441477565106	0	1.37922518043777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58456520-2	2.58798702754184	0	1.42246764562106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141407079-1	3.49941738439986	0	1.33626554137807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61967419-1	3.20523343054199	-2.70003162734434	1.24936772141021	-2.16111844501369	0.0306861911065595	0.261198364471699	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71759780282779	0.306240821987646
Merged-chr17-56939363-1	2.38776289523866	0	1.36857038556657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123356373-1	2.42775695094248	0	1.36530634154636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125420400-2	7.08711628264726	0.366350894155856	0.566130385279008	0.647113992963488	0.517558169650926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02641409000675	3.20480436346022
Merged-chr6-53795990-1	2.76975497839356	0	1.34703812969239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-50959546-1	7.91221821184474	1.79673935721753	0.91351553007126	1.96684051674236	0.0492015999106086	0.366528871363085	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66897101383087	3.20163360274201
Merged-chr8-108608967-1	1.47001530553321	2.23009280045583	1.39198008604468	1.60210108090889	0.109133259031028	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.07938469868934
Merged-chr11-18871379-1	4.69205913319697	-0.102329944432506	0.719258442258044	-0.14227145407046	0.886865593489252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95388667066756	2.51647496866182
Merged-chrX-18284754-1	2.04131517041989	0	1.42049137094633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181022419-1	2.17448893614987	0	1.35812770449429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22163908-2	2.51222048996102	0	1.35177139082446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61682548-1	1.70308981680187	0	1.3931157780324	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90955379-2	2.57231313590977	0	1.34804705502745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84750622-1	1.7190734867749	0	1.41454795108755	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49210722-1	1.81174988737987	0	1.38627718573413	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27927046-1	2.41188786284385	0	1.36331333634742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58615401-3	4.11579820132687	0	1.30748276010211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89474033-2	2.29201115215416	0	1.35623676364967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47319024-1	2.05873348764061	0	1.46780169228455	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144300251-4	4.10078997446488	0	1.32133174376332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34216159-3	9.60074217035349	1.24559050229774	0.683268852558103	1.82298739015302	0.0683053007591531	0.466891023368998	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7698943187697	2.48834673140933
Merged-chr3-31139220-2	2.78952613630944	0	1.36806000874946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115887045-2	3.32296223140577	0	1.31602854262811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55888010-2	3.25081121908186	0	1.34604535531519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56614516-2	5.70768443444708	0.0584787125333551	0.634048421066017	0.0922306729114405	0.92651476843985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84982403668166	2.78588933098808
Merged-chr11-79286591-3	4.89479661668442	0	1.30097424497984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35349409-3	3.66248042656804	0	1.31724424108271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43606935-3	9.27073364294748	0.624282886897378	0.470996528714373	1.32545114207405	0.185021564105171	0.963687161487051	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9769723347229	3.42360387675566
Merged-chr13-10540383-2	2.62811371046887	0	1.34386986993537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131869501-2	4.6701925543459	1.41217625269137	1.29356132208022	1.09169641097525	0.274966563246031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.290685631813391	0.563523181795778
Merged-chr18-61134702-2	4.17042717032708	0	1.36581969568861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58850020-2	4.02010630775714	-1.96122604667139	1.08537864829219	-1.80695101175735	0.0707699177580522	0.479673378883692	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23483346433385	0.843323834477631
Merged-chr4-3085608-1	2.09509359208473	0	1.45274738146484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136211933-2	2.12948357309836	0	1.35631848774531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81510878-1	1.51819990657979	0	1.44327503231636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25436351-1	2.56684655849485	-3.81325598995641	1.17355458764134	-3.24932136102883	0.00115680710603534	0.0212518181475922	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65863559069915	0
Merged-chr1-167551861-1	1.72570167741592	0	1.36709056767386	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116170255-1	7.64647239434661	0.840478214711854	0.514852205704498	1.63246501694945	0.102581562251455	0.633521856807826	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74256470212501	3.66942684218967
Merged-chr8-108770758-1	3.18862579382099	-2.55124616221251	1.02344390903586	-2.49280506697813	0.01267384047602	0.132658141878264	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07365307310332	0.581381506691384
Merged-chr3-60569601-1	1.73682447948149	0	1.56557940215996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34778036-1	1.91029789247149	0	1.42388019924837	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23727701-2	3.56972953534504	0	1.34841081863261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23821703-1	1.74977481886397	0	1.47357383147394	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40313198-1	4.26899457792802	-3.53986227991991	1.21977780271625	-2.90205500709817	0.00370723438037476	0.0519076361302698	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55640001214908	0
Merged-chr7-75691527-1	2.00096460992999	0	1.40986355757243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53785604-1	2.29558691814328	0	1.42474431357753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134298494-1	2.79416194662732	-0.622458899021035	0.856731080317944	-0.726551088574996	0.467501000243132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38594101688669	1.6861536412647
Merged-chr10-123101523-1	2.87312185537123	-1.81727848248777	1.00008378806493	-1.81712622899731	0.0691977874264272	0.471266140403055	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88798012394277	1.29835464915396
Merged-chr2-51509412-1	0.81572262431316	0	1.77995711141398	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-36186635-1	2.01505137825984	0	1.44703134355215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117232356-1	1.66317993465304	0	1.47464322478723	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81668647-1	1.97130231308989	0	1.45571606988546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46507930-1	1.95093947939041	0.216821272803988	1.47239910745733	0.147257134092138	0.882929065591272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.306240821987646
Merged-chr5-33803580-1	1.5404018244563	0	1.50735622659746	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-58350814-1	3.82562724939095	1.41192150363968	1.29968475442064	1.08635690219285	0.277321121187771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.804694039803978	1.50690972966086
Merged-chr12-86889622-1	1.59033143757157	0	1.38775595403587	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86024557-1	2.12141584034581	0	1.38148743500599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53128734-3	3.31067810451951	0	1.33051761782968	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-77077935-1	2.23117729479364	2.21048817438372	1.51350360188145	1.46051067974721	0.144149774560375	0.804751060950215	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	1.89010511185031
Merged-chr11-16589514-1	1.30495459413655	0	1.57561043271695	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101174823-1	2.47775197434205	0	1.43012037254342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88559521-1	6.88849255024047	0.404303580972636	0.78742705849316	0.513448930427056	0.607637325746563	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8931080462067	1.78278738970338
Merged-chr11-50207334-1	2.29331579685655	0	1.33539300886184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55398364-1	1.85614189365187	1.82825011144361	1.42195469008766	1.2857302164325	0.198537231913328	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr15-62450011-1	1.46184969378361	0	1.46200745636776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69575398-1	2.47823916955895	0	1.35029802103687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50605889-1	3.26931227685837	-0.518144962580297	1.07518780344969	-0.481911123729133	0.629869083666664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55630623826738	1.78671256729753
Merged-chr5-29293392-1	2.30527828344639	0	1.41890401460338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185294400-1	1.73967142462254	1.27625679030508	1.41217850963827	0.903750327309538	0.366127806244415	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr16-14381174-1	2.49168714024918	-0.424187951620879	1.36591867750254	-0.31055139563394	0.756141681908237	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr13-81104038-1	2.69898744509945	0	1.33804564375361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-56795335-1	1.19507721525741	0	1.56138573517505	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142277637-1	1.71554060054648	1.73840216822741	1.42772237969643	1.21760518217627	0.223374044197113	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.773587911294612
Merged-chr4-84977045-2	3.38858270426874	0	1.35524764232373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26482932-1	1.66395635187526	0	1.54093802651948	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145073064-1	2.48572200942273	-0.482232927480813	1.76037206211143	-0.273938071308864	0.784132213563938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4440647238799	1.45063110846411
Merged-chr13-75823943-1	4.5962355785541	1.2517999243593	0.776899815370089	1.61127586799977	0.107119608105359	0.653762763729599	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44631942293099	2.96006934525357
Merged-chr7-100817365-1	2.87256161350207	0	1.35868723696509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99198061-1	4.45441475571986	-1.67113095527185	0.718776920128386	-2.32496468441608	0.0200738486602783	0.18779466206937	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7138061759686	1.96353301543917
Merged-chr13-112336260-1	3.76296489034849	2.99766028414889	1.18792810553802	2.52343577879339	0.0116214285629543	0.124332124507075	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	2.08153858449613
Merged-chr13-6469561-1	1.91349665890068	0	1.48211262130945	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89974797-1	2.70095579322674	0	1.34706369448964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125062207-1	2.42701938651391	2.05556482000489	1.32621968270453	1.54994292937428	0.121155214587509	0.715047746787876	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	1.41083941945204
Merged-chr14-103537550-1	1.20150150542746	0	1.55424504583448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53868621-2	2.81460063601986	0	1.4393577811816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-115017513-1	3.58538967735207	-0.403846892513059	0.870817683888096	-0.4637559617645	0.642822598028107	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04916912289577	1.50954942419772
Merged-chr8-11089040-1	2.25739112770727	0	1.49323744408905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82822457-1	3.09076900444092	0	1.40748233981597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150025912-2	7.39499299951595	0.478967971125136	0.60033100401087	0.797839804916129	0.424963458814852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3448156147616	3.0314401642927
Merged-chr1-17608561-1	1.98718307662401	0	1.38294973241379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52958629-4	4.24333497955766	0	1.33545697500875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154334885-2	5.03805387868107	1.61707472799801	0.838762004871618	1.92793035283653	0.0538637897359521	0.391173950220663	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.940478009647192	2.04585323093051
Merged-chr1-73902451-2	3.10752732800989	0	1.3348636010614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118082947-2	8.26410637084932	2.45021213908578	0.693613038774408	3.53253471620894	0.000411596180326356	0.00950058777803111	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75146864683622	3.18425239327839
Merged-chrX-99595663-3	3.60850130219991	0	1.35268972958166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100655935-1	5.56077646769037	0.472946648569363	0.838424942043716	0.564089431090306	0.572693270458301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68427361775462	2.2281768200003
Merged-chr4-3771933-3	5.9730524822096	4.78104599647746	1.0420020838133	4.58832671330253	4.46812978105028e-06	0.000265431280611374	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.60427070114951
Merged-chr9-45260928-1	2.32001018358298	0	1.3578861486525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66795903-2	1.83797167754265	0	1.48433033958137	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33797521-2	6.39245282730923	0.997765434663212	0.746593493576727	1.33642396196515	0.181410738558119	0.950021248563137	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63680191678344	2.87729335600564
Merged-chrX-77356591-1	2.86112277055371	0	1.357507425734	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172305349-2	5.09132142247799	2.35913844510332	0.783942480357974	3.00932594445712	0.00261828053989022	0.0399659332304757	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44029090082774	3.45055169932081
Merged-chr17-27629404-1	5.58383204915158	-0.9897373108753	0.684974492955631	-1.4449257907468	0.148478731148105	0.823151876270812	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72751299373803	1.90329117160805
Merged-chr12-8510477-1	7.73947118892992	0.423715359332968	0.6089062529328	0.695863045078189	0.486514602393616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92064463701571	2.12219448356308
Merged-chr11-90418161-1	1.39865063267888	0	1.40869650382654	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59170110-1	3.63599703455314	-2.443396479055	1.14077908560231	-2.14186647519482	0.0322042282824526	0.270734572158265	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48819138801705	0.581381506691384
Merged-chr4-132599939-2	1.47008895088471	0	1.62631420504587	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46947546-1	1.97230679885709	0	1.36452831908357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25391117-2	2.99097212800971	-2.14989103556932	1.07637754179176	-1.99733917895626	0.0457883500223574	0.347593578132083	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43291548167736	0.581381506691384
Merged-chr5-96851637-2	7.88033857653931	-2.03932268357195	0.789441174352243	-2.58324844184276	0.00978748142138297	0.109160737491328	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50149800324216	0.793480537552656
Merged-chr12-89291449-2	3.28969747519925	0	1.37103088561248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41347537-2	4.38648670441332	0	1.30610373214334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45244880-2	2.3743830822948	0	1.35778602587881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91453410-2	4.6476075662407	0.859131602852385	0.969596718265025	0.8860710712694	0.375579230558548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993097246198059	1.14490468848716
Merged-chr11-59219162-2	4.44933823941523	0.730104740332606	0.898100239456741	0.812943486992326	0.416250460095166	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03337619474158	1.26501898168246
Merged-chr6-135161009-2	8.17521679215899	0.0603036176710528	0.674487070450641	0.0894066325552578	0.928758752566423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43290280070888	2.36164355598011
Merged-chr4-63207076-1	4.22141188662975	4.37831905399203	1.03802983963164	4.21791251737594	2.4657444225575e-05	0.00103818643709048	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.73430231295182
Merged-chr11-69037416-1	1.96086643632133	0	1.4256588183274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49986388-1	3.74124361226802	0	1.39135073350164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66904460-2	2.88799368279376	0	1.36286534246676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165957657-2	2.79435256806372	0	1.34591847254871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103406620-1	3.43115586144877	-2.12888402289402	1.0324630927239	-2.0619468510758	0.0392127963429431	0.311841230354869	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37642159622902	0.688405034366054
Merged-chr12-32920412-2	3.83126778246299	0	1.36102403611175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94504376-2	4.29946934672037	0	1.35194838353365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124908413-2	5.59024379436113	-0.916292547033877	0.686410457703827	-1.33490470133431	0.181907538884581	0.951639583376175	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81868441966675	1.9201122043568
Merged-chr6-142746501-1	2.18416811714983	0	1.47432955634936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67105543-1	1.11216424974678	0	1.78569936531641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38571339-1	2.62168813146933	0	1.37569952567703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53467307-1	1.44002633706451	0	1.75040329696542	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8861734-1	2.52624678468005	-1.75254616104202	1.21476642486846	-1.44270217316205	0.149104386807466	0.826049616724638	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23430780463518	0.306240821987646
Merged-chr4-55364529-1	2.39569368227321	-0.44169617679469	1.38363744943018	-0.319228260970091	0.749553428040239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0
Merged-chr12-78912320-3	9.38720198216924	0.258375806117184	0.571349806687222	0.452219993939069	0.651110505845553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51784009823026	2.99416459083
Merged-chrX-164967682-4	3.60517321540024	0	1.31483605768694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-68220745-1	2.11987704524015	0.0266920242481009	1.0619074224232	0.0251359239840245	0.979946546031614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95244688668699	2.15292080626044
Merged-chr15-101317982-1	2.30266965297243	0	1.48903466187362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59152159-1	2.92284470833236	-1.45584861550838	1.29652868126858	-1.12288192042456	0.261487646993743	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	0
Merged-chr1-172391053-1	5.89322347609257	-2.63524560952942	1.01169878730763	-2.60477292509407	0.00919351674897638	0.10395031594916	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50896369391654	0.563523181795778
Merged-chr17-27767719-1	3.67142567916143	-2.37672614976778	1.06532872516823	-2.23097912749181	0.0256825116400647	0.227220336532855	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91079917224263	0.733321818366247
Merged-chr4-133903762-1	3.36164164947974	0.576737462979615	0.993023204660994	0.580789512543673	0.561382324144719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08329116028347	2.53837419804873
Merged-chr19-16457319-1	2.4291536367141	0	1.36400223840682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143917055-1	4.56116192861831	0	1.31349621908121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70847905-1	3.54285433383384	-0.627370788676078	0.995757687855567	-0.630043630420935	0.528666038724705	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85901116032013	1.82988036406229
Merged-chrX-135091314-1	2.36379886441598	0	1.33423888532427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78841945-1	1.99146852221161	0	1.41277202021688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85280547-1	1.52275025454216	0	1.6477645059515	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-27021758-1	2.17375444080366	0	1.35248680450326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69031897-1	3.52179198058702	0	1.33592986750129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34142633-1	3.65980138627897	-2.0981404364091	1.04729921792585	-2.00338203303963	0.0451362984570381	0.344385947637499	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00043533251643	0.581381506691384
Merged-chr7-82303685-1	1.57982044272088	3.03494266844526	2.45179923721797	1.23784305924207	0.215774258896305	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.90209035375395
Merged-chr4-3790018-1	2.69222842543573	0	1.34742527235179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33239849-1	2.82910866931741	0	1.33817919678256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31103019-1	3.62165853522934	-0.879087644120274	0.903702413507347	-0.97276230646376	0.330671450557575	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58810661739807	1.76302217368042
Merged-chr7-69993149-1	2.80662081254153	0	1.3972766876123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123253384-1	1.46852784099665	0	1.51224424092405	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82092401-1	1.41978671818264	0	1.5830826311664	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99239310-1	2.68581415539553	0	1.41581108673698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11531466-1	2.12918304587319	1.48457587480524	2.06197223483666	0.719978596085628	0.471538174104084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00604125618525	2.11039133983348
Merged-chrX-101416752-1	1.67042269468709	0	1.40021574900894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176825909-2	3.13133174841342	0	1.36058075904098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67956770-1	1.52521987847235	0	1.39879695778939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60841749-1	2.54154034233637	4.02450583393733	1.25876737826506	3.19717995828924	0.00138778316845156	0.0244436870419503	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.290685631813391	2.72440493147381
Merged-chr3-117265889-1	1.22227686289466	0	1.52367145028869	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47772077-3	5.68704648031775	-0.0689112711611981	0.741029237763106	-0.0929939976042185	0.925908329777617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99638348902673	1.92713101668536
Merged-chr13-34647763-1	1.88426675476316	0	1.39280613685609	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97292993-1	3.05605145506202	2.6566444190193	1.07730675567748	2.46600553186787	0.013662922414036	0.140076844515371	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	2.1552264446993
Merged-chr16-22798721-1	1.55801291125029	0	1.4741078326076	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78138123-1	1.59095127748933	0	1.49016452174036	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46314647-2	2.18777306318962	0	1.36741783420154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44272012-1	1.38291903918789	0	1.46309016164388	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117976483-1	3.11068147431176	-3.77144373363087	1.11075308553062	-3.39539343420254	0.000685300458079356	0.0140557576062943	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29784801746915	0.420961122473315
Merged-chr16-26349011-1	1.2144219951526	0	1.5722057994104	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96375506-1	2.05123413277441	1.31575643660413	1.15803332163597	1.13619911622693	0.25587324033357	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784769569710081	1.59652745948425
Merged-chr19-34436007-1	1.89175281162225	0	1.41131107663779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67232669-1	0.820605339778833	0	1.7888536292899	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62852273-1	2.8064193429207	-0.835850902179235	0.920468893124948	-0.908070776125373	0.36384082930092	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43252070434442	1.41926493179619
Merged-chr5-110330687-1	2.87565679297351	0	1.39582010331465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56322244-1	1.63588378693443	0	1.39906389317082	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131975225-1	1.74947497463688	0	1.40715195498177	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-123991031-1	3.71192498093966	-0.985687879854049	1.05394453161439	-0.935236960093343	0.349666194942297	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56666149990519	0.733321818366247
Merged-chr16-28914834-1	3.9629246850209	-1.06818179649115	0.915313803719778	-1.16701156712608	0.243205698302728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33345462608914	1.31470332505763
Merged-chr2-33847632-1	1.70250945349121	0	1.46078780541922	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65387064-2	2.4382354199724	0	1.35258123268679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30745417-2	3.57722997118828	0	1.35533033774772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-147178316-3	9.38566712619232	-0.283233277265282	0.5624921663321	-0.503532838709898	0.614589698351749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21012574229643	2.93978512619004
Merged-chr1-80475171-2	3.42455099148541	0	1.35524100773687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123068012-2	4.55652259357531	0	1.33109855810678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124702927-3	3.1010782675843	0	1.33600454971459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128345097-3	3.31119126351044	0	1.33616374881084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94821439-3	8.52730091632073	0.120705058048371	0.54252292832125	0.222488399562897	0.823933702792174	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13068364390926	2.78710103241185
Merged-chr3-8987229-2	6.68539215798579	-0.435082490235861	0.670899031396156	-0.648506660280078	0.516657304472485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53963274229522	1.44027592657175
Merged-chr19-45311104-4	4.05432434967815	0	1.32775807438502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9281436-1	2.67325384064195	0	1.33979596168708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36371699-1	1.7234784440248	0	1.41002339613313	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54666168-2	2.62421614605321	0	1.3778234990729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140959392-1	2.75727404850212	0	1.36433124222754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134773560-1	4.93171374413719	0.282491915694734	0.839029925404241	0.336688724849273	0.736351563898411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01846067729944	3.07454628738135
Merged-chr9-22327243-1	1.62874863092413	0	1.54357458848102	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80057799-2	2.7713461211308	0	1.36951501194822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11450862-2	3.29535897197833	0	1.34365394085201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29403119-2	3.08298946761453	0	1.37027099201352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66266374-2	8.36391995244002	0.518027370366475	0.670413405105139	0.77269840731367	0.439700889473277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38858524658795	2.54410203638168
Merged-chr4-141912261-1	3.30529439247107	-0.461741037868063	0.784175359769208	-0.58882370137715	0.555979544696219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46579898742095	2.20491078807447
Merged-chr10-26760537-2	2.6174331961768	0	1.42742146884354	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91087605-1	2.89360425252591	0	1.33473651196621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35937899-3	9.2678933528911	0.439220133704181	0.565659634830363	0.776474237614462	0.437469026323083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2246081534098	3.83301318468057
Merged-chr1-194993755-3	4.07295205825619	0	1.35485974669093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-35150491-4	3.81116545850485	0	1.346250165564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46009167-2	4.02761153691358	0	1.33167471770967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-48998759-2	2.19119061112062	0	1.36559600822304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171614160-3	4.1147191387672	1.41214544377139	1.32987596394861	1.06186252105686	0.288298101740312	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.563523181795778
Merged-chr9-96526190-3	3.75163015084448	0	1.32330257272145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3763310-3	4.26019725039116	0	1.30555156788421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84584429-3	3.89198249412662	0	1.30014869420828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167994282-1	1.49888396971533	0	1.5269501855599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-14764996-1	2.01907507188067	0	1.36404250451374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133941293-2	9.53528052482038	0.505819271320707	0.667681829384803	0.757575313659149	0.448705263351084	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49813173121835	3.92992083528532
Merged-chr3-135604815-1	2.78648643103991	0.148096345183997	1.16886330636386	0.126701167174714	0.899176922012804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	0.733321818366247
Merged-chr1-161027400-1	5.21009418341757	2.2452525200134	1.04138634148855	2.15602263114384	0.0310818980496714	0.263632979109153	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55470891365434	3.60587338187834
Merged-chr6-84058789-2	3.35642154174395	0	1.35789496369199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24363727-2	3.94846378984876	0	1.3527925965531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82992298-2	5.72053929435232	1.37678996047338	0.977329227340399	1.40872688747889	0.158915941268953	0.863788205884549	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	1.40646071772112
Merged-chr8-124346668-1	4.31676716426593	4.66983445392865	1.06514996061876	4.38420375213261	1.16410780176271e-05	0.000572814671792066	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	3.81564033530238
Merged-chr15-50363118-1	2.16208861368021	0	1.39544167665639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77283840-1	1.59545905891815	0	1.51773367410528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3604138-1	1.87235694592165	0	1.54577531277724	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17568014-1	3.27229176558922	-1.95948286617335	1.16437021858603	-1.68286927550661	0.092400400577772	0.58394551026645	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98622115661588	0.609949614787909
Merged-chr6-72103516-2	2.72829914754981	0	1.39271987848186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19969284-1	2.40925818115544	0	1.36534055344978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75715131-1	3.26859393636505	0	1.33078152386412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40094238-1	3.10178521267984	0	1.35460091865939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46953593-1	1.9612819376499	0	1.39010529440345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80029987-1	1.22521015867743	1.92083452839411	1.43990694341394	1.33399907346784	0.182204160182024	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr10-19291717-1	4.47172327552629	0.635029082622128	0.839736875489606	0.756223885311546	0.449514974404925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39654233057492	2.58732124143557
Merged-chr14-54647497-1	3.86151685345897	3.03332450244286	0.91564605070136	3.31276971065339	0.000923770087134835	0.0179443163239931	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.679533914075134	2.77262737627126
Merged-chr1-39983181-1	1.87638562006762	0	1.35171338334572	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37716419-2	2.40486776668985	0	1.38223460262414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152607630-1	2.18187562346815	0	1.45296328182441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34302680-1	3.35211619065396	3.26907504679877	1.01960540461686	3.20621588704425	0.00134493044000148	0.0238302127256879	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	2.74034206253736
Merged-chr16-38821177-1	7.51369169802316	0.574930342849023	0.584905478871326	0.982945729895451	0.325634149359024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18867428598149	2.70321591943806
Merged-chr1-192736209-1	1.86076972831094	0	1.49041926395657	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41129458-4	7.61845355771114	-0.71731020738692	0.539797271760173	-1.32885111673112	0.183897093972287	0.959296650155904	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47462088109267	2.83977088234384
Merged-chr2-31765641-1	1.92374320747782	0	1.53063246273994	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52368421-1	1.99328042423592	0	1.46165502949141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145588614-1	1.85928110176749	0	1.35657036204333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120457697-1	1.49824718677691	0	1.40218233492761	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79655737-1	3.34332599964403	1.63841694334109	1.1666675638095	1.40435630008534	0.160212776960184	0.868842446627102	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.741231840258805	1.97898450809916
Merged-chr14-29941103-1	4.60548972097848	0.327720330001581	0.84938222459838	0.385833751296761	0.699619797192172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23410553091911	2.11480110409737
Merged-chr3-55354885-2	3.09009425687556	0	1.34925985794243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79661616-2	5.53113648682585	0	1.31634564357912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3817961-1	1.16570415838494	-1.7556615105311	2.24014885309859	-0.783725379723161	0.433201267077192	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73993963344045	0.563523181795778
Merged-chr12-81889159-1	2.15640156071797	0	1.3606920477635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65789193-1	5.28940143854141	-2.27222388362018	0.792503494677637	-2.867146831377	0.00414190798705113	0.0564456974602383	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5742442275752	1.04885222765555
Merged-chr16-20354256-1	2.10642289314445	0	1.54198580801464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34066227-1	2.60506671569824	0.03077743116184	0.93302204178038	0.0329868210863603	0.973685097172556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80248096346514	1.84263888870065
Merged-chr14-33392990-2	3.6410708811729	0	1.33911147625722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61497796-2	3.59613052694145	0	1.32120768870063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40627400-1	2.60545486948599	-0.507022546742725	1.17804100467743	-0.430394650720634	0.666908585886688	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84129588623117	1.85212475157961
Merged-chr18-46264492-1	3.06036696558958	-2.58751663448999	1.4011187488933	-1.84675041750301	0.0647833209281041	0.448588628734544	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82774034224014	0.306240821987646
Merged-chrX-38564155-1	2.04441431855184	0	1.41842429480326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23445217-1	2.19202081388491	0	1.43589835220534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5022834-1	2.13983995027366	0	1.38509388348543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8137325-1	2.48470809548705	1.45749274391062	1.15290682001918	1.2641895412557	0.206162003837323	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	1.77338015316878
Merged-chr8-74972544-1	2.07150545310047	0	1.35228603316457	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-52450928-1	1.56877146539657	0	1.68990020954727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51217183-1	2.12380460186441	0	1.45427545855559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61909470-1	2.53568912068652	0	1.40573458148037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118026777-1	2.62863633425457	0	1.41712292367733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-13251216-1	3.07426934787995	0.38212094518347	1.09635456631284	0.348537742191	0.727436374378855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43542760144534	1.93871841517079
Merged-chr7-25599823-2	2.63331492103857	0	1.36291272222866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107334302-1	1.97186172055292	0	1.36370659725777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28757433-1	0.740818321220177	0	1.8467042645798	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18938136-1	3.39960466558201	-1.79892958271667	1.72779215382488	-1.04117244584907	0.297795521428935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80780166307482	0.825079211029734
Merged-chr10-54121365-1	1.95285703468758	0	1.45837758435646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132701594-1	2.58667504642254	0	1.32006036941054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24960153-1	1.72116800371511	0	1.40724829645264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95305645-1	3.42911253339309	1.52107259936765	1.10203800753524	1.38023606170317	0.167513974078598	0.896068119690577	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17433619252548	1.75238521850622
Merged-chr11-90666309-1	2.82047617795293	0.778000013610953	1.00355346460125	0.775245207209845	0.438194779743944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94462853770847	2.26611452293889
Merged-chr3-127301851-1	4.4038656315171	-0.163554267174342	1.0766175927387	-0.151914912293318	0.87925404649822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51293571805954	1.9635581111928
Merged-chr2-27769370-1	2.06603520342989	0	2.01917770651719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119972268-1	1.94927386219913	0.64229372516033	1.39777396039048	0.459511869130042	0.645866630685858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23924464593734	2.16448544747254
Merged-chr13-35388595-1	2.19105683375727	0	1.38419405802323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85221063-1	3.60774930317569	1.02101602534775	0.958922338918821	1.06475361341455	0.286987441410106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.838977036854949	1.41695929335733
Merged-chr14-103387263-1	1.30937747638069	0	1.47082912840932	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122396989-1	2.24509769207892	0	1.33898905427376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-11129312-1	1.42453543840987	0	1.47128882417375	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70883229-1	2.76323944265738	-3.51646410281808	1.2085606802938	-2.90962974400527	0.00361857158254797	0.0508295740827988	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46985989298377	0
Merged-chr17-28218443-1	3.20542037707115	0	1.34890523128541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117034931-2	3.06769409998814	0	1.34824446203507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115479123-3	4.13654102108216	0	1.37368571749598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124351323-2	3.03739516733157	0	1.33913858149864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47721224-2	1.75761714242487	0	2.36004246185898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100449640-2	7.49379697904975	1.65342755368699	0.68466141521901	2.41495652731956	0.0157370878282485	0.155434664634935	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84470544815602	3.09310968683703
Merged-chr10-8914870-1	3.17174189971254	-1.82025111641747	1.15499154239734	-1.57598653288776	0.115028906871662	0.688025533037583	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45326054927621	0.306240821987646
Merged-chr6-37143220-3	3.92564512094446	0	1.31508909746467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5510058-2	10.2341201656295	0.426743003358636	0.684794903068993	0.623169070689829	0.533173424318511	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09100859675104	2.67395361090298
Merged-chr2-51108860-2	3.87428162688476	0	1.36235346116721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34693223-2	3.36536979237209	1.29482273879613	1.32582070580314	0.976619789635707	0.328757418121538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr10-8882489-5	13.5561792612157	1.20752263027988	0.535600220241128	2.25452228107049	0.0241633305807812	0.21709403904151	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41915855704373	4.59545194705558
Merged-chr2-77919184-2	1.79892690473519	0	1.42700254023962	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84601681-1	4.74149096636003	1.24930950449784	1.08014055023005	1.15661753855252	0.247428653471998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	1.20275690226768
Merged-chr8-125352557-1	3.73442847832596	0.301377832191015	0.724873931118037	0.415765858383366	0.677581344172652	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77743537719243	3.20642815764035
Merged-chr6-114907719-1	2.88435161486665	0	1.3594946817313	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80217687-2	3.51064491617419	0.0828550676466662	0.913859426992168	0.090665002952775	0.927758779659804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04557531338138	2.39401765632919
Merged-chr15-73441236-1	3.01010682268388	0	1.35714072571324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-25424625-2	3.39400337534475	0	1.37663770925496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77836087-2	2.20580937940234	0	1.33730455276204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61866515-1	2.61276122100425	0	1.34742014226387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-80275236-1	2.05736970498381	0	1.38642265656039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55956971-2	2.85462399913288	0	1.341362160204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115908780-2	2.53126529447662	0	1.33753837373213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-65519831-1	1.17320702637265	0	1.60315227469041	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94150725-1	1.04416731406174	0	1.90442118733164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33184757-2	4.23035284670149	-1.23704366794465	0.847627844484366	-1.45941839451626	0.144449986233057	0.806013901493068	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27827110822826	1.31470332505763
Merged-chr7-81959828-2	6.44897826693692	0.967491722095151	0.588183898639541	1.64487964450054	0.0999946334416638	0.620949284128002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61594202290973	2.5681280110541
Merged-chr4-107164226-3	2.97766717182141	0	1.34421352443105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101135578-3	12.3205766672246	2.09318162326296	0.501927160012892	4.17028961574662	3.04212783841871e-05	0.00122559115739401	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00266915897121	5.10404291651068
Merged-chr13-37594882-1	4.68002702197671	1.92081481805827	0.915130576549238	2.09895163300221	0.0358211646007093	0.292230939075899	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02591514145915	2.88456143589366
Merged-chr12-26401928-3	4.43015452173445	-1.90854075377478	0.838796529033095	-2.27533220240529	0.0228860090661322	0.208317195770368	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43188618080154	1.58492111464609
Merged-chr15-72873264-4	3.64244043990998	0	1.31452474968168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31025107-2	7.83230482811716	0.58588376097987	0.710651774782307	0.824431573620347	0.409694380832361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73184018946212	2.26013325920287
Merged-chr6-58770945-2	3.11762774901187	0	1.30843384758784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85823397-2	3.13895492591416	0	1.31814709157424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-95851201-3	3.7022578195068	0	1.34637572609401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-109954117-2	6.4981805123146	1.68277384908946	0.699640069158486	2.40519936360058	0.0161636452122814	0.158712180321824	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50514531139933	3.02096333774854
Merged-chr14-79519020-2	5.37395951578451	0	1.30818869714123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80899877-2	2.63819766142551	0	1.34659251150967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42004639-1	2.3541121987096	0	1.36826964458845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119517247-1	1.91728186481387	-0.103991720715274	1.43352353562237	-0.0725427369213894	0.942169995892671	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22143538383401	1.19664257419518
Merged-chr9-118716481-1	2.02266432763491	0	1.44796971447709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33146539-1	3.14717629174827	0	1.35144420568753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61667663-1	1.45536131326687	0	1.63660586773021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72984223-1	3.54077438299235	1.69720500230502	1.02786021660132	1.65120215267882	0.0986973037132616	0.614528252353196	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	1.90927269178975
Merged-chr1-156458780-1	1.74668501324497	-1.48632918350185	1.29480665318756	-1.14791593002924	0.251003271281853	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.810661139835435	0.306240821987646
Merged-chr4-109207675-1	1.60463242537797	0	1.43700256089147	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-29634410-1	1.63089881644066	0	1.51964124041966	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37028350-1	2.16699929523546	0	1.42984900405552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96915380-1	4.55836329641875	-0.990317583389729	0.845405773880782	-1.17141095316127	0.241433631675181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58513027840741	1.34805514843284
Merged-chr8-88624678-2	5.42143434894241	2.82720511091183	0.835199804909762	3.38506438135159	0.000711615616533005	0.0145089653909409	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46843728091332	4.32187653493988
Merged-chr1-77740664-2	4.35860371953286	2.38831141847475	0.703990124882765	3.39253539795388	0.000692489838821092	0.0141765166063919	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44255972532428	4.01570655310278
Merged-chr3-87152316-1	2.2099675622868	-0.526356248974545	1.23059119827602	-0.427726323503643	0.668850382667441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39422283012937	0.666688015277142
Merged-chr13-112803866-1	1.78883703316661	-2.19789730267265	1.2912033549384	-1.70220848193002	0.0887162933172179	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25590917117358	0
Merged-chr2-46441671-1	2.3675090836953	0	1.32973538900915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77849363-1	8.15089213575066	-2.19101462116403	0.779056871191096	-2.81239368034094	0.00491742771187923	0.064292563277403	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54813213158496	1.26501898168246
Merged-chr10-84110786-1	1.99242254062809	0	1.49380774932127	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68121807-1	3.07954304418966	2.12170591035614	1.03446985322003	2.05100796678785	0.0402661709133202	0.317781787983311	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38290948459008	3.37282624520555
Merged-chr7-31094316-1	1.65131626454333	0	1.5623405987869	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105716699-1	5.61257125508939	0	1.2965410911133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13823305-1	2.67090386627986	0	1.34705256427635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70752525-1	2.31183034388036	0	1.42520594722732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14277742-1	1.27379071484166	0	1.49194544338824	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130535171-1	4.65819125019773	-0.56710610487675	0.725321279926308	-0.781868836020317	0.434291661482477	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11717966831028	2.30889993389418
Merged-chr3-108855019-1	3.29443515620004	-0.186958804107465	1.16412912271882	-0.160599713948246	0.872408680209505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816236209360687	0.666688015277142
Merged-chr4-137951776-2	8.18965308744984	1.33432377863859	0.719887805910049	1.85351629473957	0.0638083927973862	0.443954773822189	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58602061260911	3.8198205016186
Merged-chr9-63930181-1	1.50228378254986	0	1.63162189510562	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125558326-1	6.43342592290798	1.12617340691371	0.521694250898123	2.15868471806033	0.0308746351701498	0.262363860587971	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21513130787879	4.23326608869362
Merged-chr11-100904784-1	2.21775977346065	0	1.42441807779281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11475738-1	1.32202431589986	0	1.51509582492278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66697278-2	6.25422184802654	1.48379043978172	0.681976556275855	2.17572059644457	0.0295761591507315	0.253599750146136	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33788524438958	3.15468803417284
Merged-chrX-117671328-1	2.14020701797161	0.69846436969636	0.9206275190952	0.75868291486965	0.448042259609973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88779708192158	2.50442746498371
Merged-chr4-86711026-1	3.9988479942119	-0.303566452852837	0.96043717200592	-0.316071120215832	0.751948526652835	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22986819382768	1.73775798795819
Merged-chr7-75910179-1	2.90156050747076	0	1.35697459798588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55063458-1	3.08581004433555	0	1.34693561280555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182991106-1	3.37415142727518	2.84471003113261	1.2131940595246	2.34481038610372	0.0190367581128477	0.180286376180021	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.773587911294612
Merged-chr5-21332762-1	1.83790332859258	0	1.38783210810974	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-13599949-1	2.75655772163711	0	1.35091421188369	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8648854-1	2.39586603338177	0	1.38154441346284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148533904-2	3.83290331530711	0	1.33424396247103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87372254-1	4.95172250648932	0.861307811208304	0.749903106007953	1.14855879954066	0.250737954133568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41810408988263	1.88772579123251
Merged-chr6-116135806-1	2.22582919157012	0	1.36290518992422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-6029894-1	1.86832684717875	0	1.40858478003883	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16211180-1	3.83952696486568	2.83945280581334	0.840429346783525	3.37857407845221	0.000728627987678834	0.0147866225102053	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34643008225026	4.0614174939396
Merged-chr11-64834695-1	1.59810408112416	-3.22459869814117	1.66851534492446	-1.93261554827784	0.0532835756094964	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42711525649337	0
Merged-chr6-145800452-1	1.95647756770378	0	1.43228380068446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82759105-1	1.29958309077689	2.46894919117867	1.62793583401245	1.51661333302882	0.129364337112823	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr2-173227724-1	1.88291070586625	0	1.39313181991248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37688103-1	2.03201821286119	0	1.36674792667443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91081329-1	3.55450319553801	0.843250001470555	0.952218540560997	0.885563518826	0.375852777310642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78881403113768	2.26168904957223
Merged-chr1-53888151-1	1.93599783544534	-1.29087099182175	1.27006809805389	-1.01637935304393	0.3094487738052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.782001200233288	0
Merged-chr3-59204341-1	2.54573035315086	0	1.34874611813784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103392552-1	1.28810182758729	0	1.45024313963699	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-26908395-1	1.24647326138706	0	1.58742794093342	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-103528090-1	3.75708595068485	3.49688451470938	1.41669992724944	2.46833111758442	0.0135744688928419	0.139361703734745	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.48834673140933
Merged-chr8-105554322-1	2.59592528197203	0	1.38883004161213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23056518-1	2.59793280305013	-0.338928426710545	1.10458480909298	-0.306837848864546	0.758966797736968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28632773855059	1.08186277552917
Merged-chr12-111958274-2	3.25050696526949	0	1.34031650672833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43842109-1	2.18021595317048	0	1.38086042146898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70942205-1	1.44683895862774	0.0952896197828402	1.44972891519132	0.0657292675784596	0.947593370633674	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr15-80792738-1	2.34525904464801	0	1.37689355912852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115515448-4	14.9731248387206	2.46230622580824	0.456534622908172	5.39347094886932	6.91095036464849e-08	9.04907483446669e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00339235076716	5.29452081559071
Merged-chr19-17228799-2	4.09405702362783	-1.10604286777843	0.858304627983969	-1.28863672840302	0.197524408429259	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87022984410737	1.40646071772112
Merged-chr9-42158785-2	7.45244525527846	-0.0628426881171728	0.668941659778808	-0.0939434511194181	0.925154077437338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98963525360119	2.13938900109644
Merged-chrX-37113473-2	3.52378646541279	0	1.32793835260819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124033450-2	5.52263661237141	0.761575698966941	0.566299146189952	1.34482932579151	0.178680357590554	0.939192941370043	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34794272079266	3.86816681944572
Merged-chr5-151108734-1	3.068426431251	0	1.32191175332265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84250012-1	3.7126887084923	-1.48910790430144	1.05334749500326	-1.4136910291858	0.157452640452261	0.858123456463175	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67221365329644	0.581381506691384
Merged-chr5-122965684-1	1.92706799373903	0	1.38905201367432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117217457-3	4.18775798280999	0	1.33067211228719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151585848-2	3.33393973686066	0	1.34608416659423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-87603190-2	7.08505391248704	-1.84319818942789	0.817719612234536	-2.25407115330289	0.0241916920763449	0.217147020662203	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28370340329338	0.900948542443349
Merged-chr8-48009223-1	1.99633235104654	0	1.4022215898625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-111687183-2	3.02486760895335	0	1.34839923200317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67131710-2	1.84242132803692	0	1.50701802486509	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57924471-1	3.10537142700786	-1.93537393911477	0.983896437321225	-1.96705045948134	0.0491773937735602	0.366466640840126	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62046656734578	0.989878296978726
Merged-chr17-5004577-2	2.49125477634925	0	1.40404318929416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126515397-2	2.97679942927963	0	1.34539616113447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89068448-2	2.11218157908666	0	2.22207990442113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107080418-2	2.48137155960062	0	1.39631902245381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43904893-1	3.40635664621565	-0.919171314488033	1.09066627116059	-0.842761290774978	0.399361961077875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47576400514928	1.45547307112966
Merged-chr9-54547712-2	2.75185141894595	0	1.38347225380079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30691557-1	1.89016564956798	0	1.39256284611469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3077894-1	2.26116230626677	0	1.48228593261771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104183390-2	3.56351584835615	-0.22004644217152	0.831731688921876	-0.264564215963388	0.791345189593679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13342465512444	2.12591193702352
Merged-chr7-67243053-2	3.44373256891518	0	1.31300834047995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-5406937-1	2.42186211437231	0	1.39606225624921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15748057-1	1.35453986971787	0	1.44644386735775	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99658259-1	2.81040227768272	0	1.3195478630323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104111919-1	3.03365768547946	0	1.38382416284865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12880350-4	4.21715688002823	0	1.30806436334737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141571395-2	5.1483193404903	-0.610500233982599	0.643741839571703	-0.948361899839817	0.342945248590805	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58649557356483	2.41243934094612
Merged-chr11-94317707-3	7.79930169396073	-1.50123733636202	0.687761014556929	-2.18278923141515	0.0290513350661163	0.250051177717392	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.6964445640809	1.09662457429765
Merged-chr7-99530083-3	5.75047973619518	0.0364911740913203	0.878276294986921	0.0415486268952115	0.966858527641837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7343863289372	1.35032549026822
Merged-chr2-130221953-1	3.91888556121071	1.05778569809818	1.16187889713903	0.910409596648008	0.36260653856559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736070423127282	1.34574950999398
Merged-chr3-127036239-1	5.48354231045023	1.65100716767084	0.742555155770964	2.22341351324491	0.0261879293252072	0.230474940024915	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73667134970724	2.90186301657201
Merged-chr15-66804696-1	1.86649493024268	0	1.41862471991277	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183398075-1	1.71227794931029	0	1.51089392244527	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-130373911-1	2.19003317835769	0	1.41919467062943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79296363-1	6.89396107471765	1.33445046869395	0.630436110362315	2.11671007856297	0.0342844609472394	0.282979965271985	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19144545400128	3.08977906425595
Merged-chrX-35956435-1	2.42385186410846	0	1.34270865900056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24776385-1	1.71815042156001	0	1.60955781960658	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43425206-1	2.89003659848818	0	1.39433348014465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52875933-1	2.0847933563748	0	1.46230403783273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126156238-1	1.66842134811562	0	1.48310125572388	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75855323-2	3.33847017489639	0	1.3440105916501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40254023-1	2.60045760858375	-1.14143517051951	1.07965071988356	-1.05722633208878	0.290408304941871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16098912336502	1.15307255889252
Merged-chr4-139177602-1	2.76046782804784	3.33852720279122	1.42308690403448	2.34597563460561	0.0189773480057484	0.179868377907274	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.57664565284388
Merged-chr8-70342117-1	6.17218589863497	1.12409993408883	0.966101600101946	1.16354215122944	0.244609606613651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	1.41695929335733
Merged-chr2-98835245-1	3.15612267501049	1.57733367006907	1.13876498743291	1.38512659545743	0.1660137609593	0.889873001298736	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17907729735458	1.84883647187319
Merged-chr18-84787946-2	2.71508061285622	0	1.36060092237627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102573374-2	6.35134990521897	-0.677582716955622	0.754922178961936	-0.89755306684371	0.369423869948355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54137771686353	2.08307023099066
Merged-chr13-112474004-1	2.08233563707837	0	1.38715043126601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-53496050-1	3.49131279851165	0	1.42326454341025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70385315-1	1.50252536855152	0	1.53789983504229	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-144236476-1	2.40741310312959	0	1.39594984468069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99326212-1	1.4782418912215	0	1.49855243687735	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110963052-1	4.30027645982254	2.47779165090457	1.16785550310206	2.12165943845199	0.0338663471147557	0.280521018958147	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	1.75122680664397
Merged-chr4-145268618-1	2.04726466923897	0	1.36222251499238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88760710-1	1.90758417137004	0	1.50475972262281	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59170925-1	1.38104259435203	0	1.62228686344223	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-68960770-1	1.40493543506726	0	1.41311662238989	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33688659-2	3.05190333646448	-0.243750005200301	0.876893675374317	-0.277969852041928	0.781035501652782	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84599538464269	1.35700371934843
Merged-chr2-103952240-2	1.99306718140752	0	1.40993412298656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75137244-1	2.24994764110259	-4.08738669975683	1.15379073114851	-3.54257196683157	0.000396245286957949	0.00921460659130041	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76448856179857	0
Merged-chr10-67282137-1	2.16388350797396	0	1.41148099813671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40650424-1	2.11523381279058	0	1.46765399350056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24711090-1	2.02830255488193	0	1.37862258002337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27125381-1	2.50265196043094	1.3931530624202	1.29528362014785	1.0755583107437	0.282124840605974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.683637474991079
Merged-chr17-80502032-1	1.43936097948633	0	1.46430480745533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55500228-1	1.85063096713128	0	1.3679498553404	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127310926-1	2.17715540682629	0	1.37917729579494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38436606-1	1.63745703268237	0	1.60321654284844	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98799627-1	2.41457600998025	0	1.35011299523963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91376325-1	2.33429167175116	0	1.44056952545103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45370131-1	4.04454783446895	0.0476252556446884	1.04579690108991	0.0455396794492836	0.963677148063392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33156472806902	2.27160705103521
Merged-chr5-64321750-2	1.75334344763974	0	1.44006846285269	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37583028-1	3.42304559989957	0.109254763262312	0.750174738973113	0.145639085917325	0.884206310839155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81437249033766	2.64164223821183
Merged-chr5-117577167-1	2.43427230379415	3.03698804716528	1.269888890126	2.39153840212268	0.0167779286625829	0.163442237087827	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.21171060354126
Merged-chr10-42842498-1	2.75397412359287	0	1.33846247893821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9250853-1	7.36277462727151	1.6716997610382	0.809113716097334	2.06608753229577	0.0388202152619186	0.309133047344057	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04057261780164	3.1190548193445
Merged-chr11-72576672-1	1.35748729607211	0	1.39066352694837	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37544211-1	1.91672376894685	0	1.40805282647165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-113085085-1	2.3213015157231	-2.0397141721964	1.26316350903979	-1.61476654257288	0.106361261123812	0.650471031295894	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31807752284	0.306240821987646
Merged-chr4-11152032-1	1.88865684833635	0	1.40195506433194	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79633019-1	3.94749942119609	-0.93736159481783	1.02116465342755	-0.917933843157975	0.358653502265774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39703333777795	1.14227273603934
Merged-chr15-32766464-3	3.69428689192666	0	1.3175165264566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58360076-2	4.18265274093322	0.911554996021197	0.788565424068478	1.15596622448671	0.247694972556989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98420379469558	3.15478678495412
Merged-chr1-156617459-4	6.59208196886016	-1.18994109846467	0.672881059753191	-1.76842709601773	0.0769895300674496	0.510964638613402	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44684514974111	1.94767211644437
Merged-chr10-19128058-3	3.39119482268301	1.29803393229805	1.31563029736542	0.986625144539003	0.323826438860014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr3-87504430-3	11.7726944518207	1.12260648524641	0.528089133322332	2.12578978511416	0.0335207669474041	0.278650166496281	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89028852665746	4.14904730420719
Merged-chr17-67348018-2	3.63364132475009	0	1.33740023058301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46252217-2	3.43662402135862	0	1.32869374304274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128627140-1	2.08208047717804	0	1.62208508960449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117837260-1	2.54166259142585	0	1.4479502085309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127355959-1	2.08319437988377	0	1.36542081500492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14173631-1	3.29437005880691	0	1.3096001901748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50789401-1	1.8701941131639	0	1.36901500872809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-58772260-1	2.38505000735565	0	1.34508581607796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58024817-2	5.88375929445494	-0.568897555223597	0.943823455692131	-0.602758441520623	0.546669397132569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92041719252427	0.961728545204858
Merged-chr5-149919829-1	2.49490181359545	-2.95641606399064	1.04200469123388	-2.83723872729386	0.00455055734933586	0.0604760464815337	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35564129815324	0.581381506691384
Merged-chr6-72490651-2	2.80807578351776	0	1.3214064796898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19715101-2	4.54135028930572	0	1.3187301335725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48435476-1	1.94636931961464	0	1.37994071811558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61099940-2	3.07041883860686	0	1.3358543045486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39834990-3	3.90036651537544	0	1.33873247083332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-119979073-2	3.02610669426301	0	1.32852986480237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152795106-2	2.8667532144355	0	1.38378581954952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5708282-3	7.45154627264454	-2.11252343791756	0.936129574129418	-2.25665708711549	0.0240295102495993	0.216166351427632	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70280675004928	0.581381506691384
Merged-chr18-65001296-1	2.15723851533732	0	1.33752568916318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-43227870-1	5.86777140189474	-3.50081548336818	0.944964963687352	-3.70470400268348	0.000211637723271217	0.0057147432499508	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.89947210125413	0.890396206374751
Merged-chr2-6048124-2	3.47725815034542	0	1.33344708348882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44753013-3	4.79875384242214	0	1.36607692165555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87407321-2	6.72971887041125	0.537556565610273	0.621589136564834	0.864810103633792	0.387143024703145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63132838259109	3.53963591733625
Merged-chr12-51666875-2	3.58241869760988	0	1.31386910182896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52734740-1	1.13436609706944	0	1.71781969287808	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-61694999-1	2.55977946233763	0	1.32993804596601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65502466-1	3.20010194436658	1.76301588080576	0.926888384890298	1.90208002338321	0.0571606936449391	0.409595284126133	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58249558651867	2.82856958860614
Merged-chr10-34234273-1	2.96358267007565	0	1.34366316688113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141822250-1	6.41232916473711	0.365493137052718	0.722731490561378	0.505710823211568	0.613059669163475	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43090100710683	3.16893862401198
Merged-chr4-32304439-1	2.12325556889633	0	1.39532882692889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36088399-1	2.07837694846217	0	1.34040181859589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10502781-2	2.62361929355855	0	1.32501086519551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99680846-1	2.27783637895483	0	1.52894822069389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140798414-1	2.11320772216803	0	1.35223442287577	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26453481-1	6.63977293238991	2.32536225587447	0.963771887500495	2.41277244753964	0.0158317002324727	0.156133154752665	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95000741168088	4.02269082340723
Merged-chr10-127428167-1	1.53831294427581	0	1.46577203592466	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172352123-1	4.35820057059265	-1.55173053794473	0.99942683712793	-1.5526204423367	0.120513838967084	0.712614000646372	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14263712361384	0.890396206374751
Merged-chr3-88137438-1	2.64195313420722	0	1.33948999367157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105397957-1	2.8516586870067	0	1.33678611090884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76169306-1	1.78250828254439	0	1.38546517813685	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36409094-1	4.43448313866502	2.65470432905701	0.866813960632797	3.06259987681671	0.00219423237783744	0.0348015954191704	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26408936703271	3.73997694814525
Merged-chr13-34149210-1	2.25368406223918	0	1.34402465849194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55509155-1	6.39108984851254	1.44494968894533	0.568302506782209	2.54257138003278	0.0110040122521564	0.119438994277806	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66813542049989	4.27829043969846
Merged-chr18-5803984-1	2.50918484113224	0	1.40735294013088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129495008-1	2.58540511743649	0.142773213661223	1.19001365545204	0.119976113725341	0.9045020697474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850239143718389	0.963545719069792
Merged-chr5-61804084-1	4.58102194092217	1.92439394643834	1.1775505204546	1.63423472115269	0.102209574598619	0.631881443871461	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89108515013656	3.4415044022831
Merged-chr5-53355256-2	3.47908041118619	0	1.30801652028333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95915729-1	1.9306425697427	0	1.54920510567244	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69681255-1	3.70671961602258	0.132245117715194	0.990614602316932	0.1334980500044	0.893799506339509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83401990634454	2.14680093235515
Merged-chr5-122689089-2	4.81690908374496	0.787245803754119	0.73367031989832	1.07302392151181	0.283260383277488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77475079233141	2.09145770840793
Merged-chr19-24366709-1	3.16847455315879	-1.09807337411058	1.01313844044619	-1.08383349231817	0.278438632323847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37493541142978	1.64538595732494
Merged-chr2-45270765-1	2.49939258142422	0	1.33796355728164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-92214169-1	2.38525111110182	0.990418005546498	1.7683785815691	0.560071251636452	0.575430838526587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4262363465899	2.39006831005986
Merged-chr6-76420133-1	1.69290797292624	0	1.54062073701497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65795530-1	3.23752532393601	-0.552289843486826	1.08632282535744	-0.508403055330356	0.61117071053568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22871541631087	0.984484304269093
Merged-chr5-74284648-1	3.23846476839823	0.122257452389223	1.35280972035342	0.0903729848698036	0.927990823780277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4249550009096	1.69735600200997
Merged-chr11-114648439-1	3.61577885457846	4.48604223709425	1.09729961534181	4.08825645646185	4.34627516745377e-05	0.00163037713600708	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	3.67156849457626
Merged-chr10-67629744-1	2.21439806797365	0	1.34349355701732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103680122-1	2.44597716429167	0	1.36462995582156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-138828055-2	7.8063403477978	2.76315055089145	0.779065266275031	3.54675104963027	0.000390012949014627	0.0091020664879678	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78185309467353	3.78083628836226
Merged-chr19-7070698-1	2.56517999371096	-1.28790403007516	0.972541275088374	-1.32426670524408	0.185414484015007	0.965348966014234	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31876336180127	1.3778192788498
Merged-chr19-53169789-1	1.41195432174522	0	1.70118728388173	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12147392-1	1.32576574122434	0	1.44043773564388	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-12035104-2	2.2104377888304	0	1.38964658794898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148317423-1	3.73724993859326	1.95920919238108	0.947018708931364	2.0688178321122	0.0385631844231691	0.30789409306598	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2237449165955	3.26383057984126
Merged-chr19-11368531-2	2.65636612218869	0	1.36536868890933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8758649-1	2.64388954388066	1.42991218530751	1.29975840054946	1.10013690598424	0.271272475850877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.733321818366247
Merged-chr3-124338510-1	2.26728620063694	2.64237527692018	1.509663331387	1.75030764938333	0.0800652416885218	0.525295510379332	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.5268023559189
Merged-chr6-17842956-1	1.84839354712805	0	1.34480205930606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88240891-1	2.53380692948314	0	1.49792840734658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-137017901-1	1.95953504835944	0	1.49815188021614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34922311-2	3.48467289220114	0	1.33490094414027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107829142-1	4.10330876179455	-0.430905684559707	1.0318208364075	-0.417616769651596	0.676227333848969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63204656449227	1.15307255889252
Merged-chr8-61877809-1	1.90848889866868	0	1.41818439118093	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47788955-1	2.01900573459275	0	1.38131931906381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-44696602-1	2.37239871214191	-0.57435815668044	0.828048444401175	-0.693628688712533	0.487915097521649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43738858961725	1.88903407179563
Merged-chr18-10885948-4	3.5144958876318	0	1.3112188218077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-89987965-1	1.53074365075425	0	1.48480663603287	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122137797-1	3.84075691913674	0	1.33117652046467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45056459-1	1.94546290834994	0	1.45159198649469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131955337-1	2.54269416049985	0	1.37133229906704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99477425-1	5.18200742104427	2.42743218513152	1.04726982153732	2.31786702453453	0.0204565490802237	0.190548555835862	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.962065319910909	2.49952550894788
Merged-chr11-118493790-2	2.00890309468899	0	1.43538030046757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122660673-1	2.76931775839443	0	1.33753393909378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33944877-1	3.47178658991182	2.3585528573238	0.969578752312042	2.4325541908789	0.0149927478108858	0.149529319055273	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	2.00546756853512
Merged-chr2-167886166-1	1.62567644339581	0	1.45182960042862	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144636005-1	1.59900769470923	0	1.44796293060676	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83598008-1	1.4469779044809	0	1.71390084290656	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78493419-4	3.72274469234249	0	1.3166565365662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134151877-4	4.14682304302709	0	1.31836344247517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35889982-2	3.03837656372379	1.27934156314689	1.42271517892863	0.899225355921409	0.368532637115763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr19-37515108-4	10.1842387406217	-1.21747393890515	0.654036158066379	-1.86147802975379	0.0626767004013257	0.437946071901736	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.33376122265454	2.09282686802642
Merged-chrX-142372615-1	2.74204732623524	3.15097168132689	1.14582998610972	2.749946955067	0.005960491275304	0.0744071391653654	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr4-63686325-3	3.46624838393164	0	1.33314465968676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19995827-1	2.50527366196297	0	1.35573343887744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-147099528-3	7.35111250058277	0.883580476829065	0.784002594729397	1.12701218435895	0.259737329472308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63645579772452	3.06749705576369
Merged-chr11-11742919-2	3.05302824615324	0	1.32966105621549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-96107801-2	2.30282425030922	0	1.45210216600255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73378192-1	3.16755389272184	-2.78646917359413	1.16662083533686	-2.38849597846376	0.0169174934769928	0.164483042515634	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43139514258099	0
Merged-chr18-39246524-1	1.98268508103146	0	1.39673098906967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83533219-1	2.74213726130387	0	1.35894461216446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166082369-2	3.97814557900088	3.42684062207798	1.09878835473484	3.11874494056222	0.00181623110036971	0.0301355380093349	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.60572551668653
Merged-chr16-33080235-2	3.24972383588293	2.49366901361978	1.22443184995586	2.03659273785607	0.0416908711447268	0.325293333232635	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr6-115519497-2	2.58580706981792	0	1.35573430329275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166977721-3	2.81327842992275	0	1.3511721427172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35218153-3	7.2681012794593	0.572025099977504	0.743377175093468	0.769495108463049	0.441599447260591	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00755798106573	3.28303009614357
Merged-chr17-35420588-2	3.67854064038512	0	1.35545510532664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58583298-2	9.63949883698318	1.92434975516149	0.647192683814799	2.97337995821992	0.00294539592407236	0.0438527778661272	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16710729069779	4.10301998788344
Merged-chr7-16263620-3	9.82097299419049	0.948962653355721	0.452351025482071	2.097845699243	0.0359187780835634	0.292698400380164	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35096481050089	4.29802711663888
Merged-chr15-37135791-1	2.36346014853077	0	1.37740914440555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83044041-1	2.46438896194256	0	1.36633714202916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148674459-2	3.2412759500215	0	1.33103314726208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31955145-2	3.90671997479233	0	1.3309058589388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114787323-5	9.783813476084	0.00343400707240453	0.604066953263033	0.0056848120127327	0.995464200694624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49831518095243	2.51581026779176
Merged-chr14-17904485-2	6.56350238884904	-0.401391983524847	0.692723489959542	-0.579440410701664	0.56229204359947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57057988462638	2.08153858449613
Merged-chr1-59604121-1	2.02199642739173	0	1.37988072579093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151813832-1	3.09713104019446	0	1.37651881225381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98941029-1	2.17622618953409	0	1.38364606977389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135912630-2	2.59272226648567	0	1.43622401698044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64111479-1	3.99024302764554	0.41868029079698	0.900924974134685	0.464722704794716	0.642130046767067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.653939145705	1.96275318189595
Merged-chr18-46470840-1	1.08227876976687	0	1.78322130667241	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144170720-1	1.6523528415064	0	1.46453074292002	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123201499-1	3.26777950278335	0	1.34561833278205	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51540009-1	2.65818287643279	0	1.33839572482894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72170679-1	3.09924775310322	3.14061602826125	1.29058226526488	2.43348766892955	0.0149541447777111	0.149258216686163	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	2.92086993437728
Merged-chr7-130762282-1	1.87823591746544	0	1.39484421776935	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81380058-1	2.34594694485752	0	1.33782908446513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38635143-2	4.37286587614124	-1.2831830613317	0.878078515084569	-1.46135344310083	0.143918470381459	0.803903231382672	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15814917047136	1.44027592657175
Merged-chr9-78073936-2	2.50278629566622	0	1.39809032398433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137102235-1	2.58033266933867	-2.13648180791603	0.963189209083706	-2.21813303945597	0.0265457626655837	0.232933987799817	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98340983927549	0.666688015277142
Merged-chr7-89371087-2	2.3298272274267	0	1.40240600327578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42901079-1	3.87206856523281	-0.916458967883137	1.0812042990484	-0.847627935524991	0.396645211561262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43248870565508	0.683637474991079
Merged-chr8-72365946-1	5.56560310949406	0.595121794604857	0.808774659196993	0.735831405988579	0.461833305820635	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6129397720123	2.58328144429995
Merged-chr17-45546023-1	1.89539629458411	0	1.56509420002941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35609940-1	4.0417876244854	0.611320601148565	0.893128787481885	0.684470828526467	0.493677903899143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58435194906635	3.58747054457266
Merged-chr4-126310078-1	3.07668710427672	0	1.34413782211989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95173614-1	1.69565376123679	0	1.40399023574794	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82640132-1	1.54872886317731	1.00996177538612	1.51312735212344	0.66746647198519	0.504474218927964	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0.994591904006138
Merged-chr3-117366267-1	2.21990037320656	-0.616006386407953	1.16723014800471	-0.527750578976194	0.597672462838387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33887295575155	1.29948469469889
Merged-chr18-60462453-1	1.73317936412315	0	1.45705215523531	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95053180-2	3.00334348864915	0	1.31891097673834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44419060-1	1.4854770602653	0	1.4555011311392	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105214083-1	4.73539050906805	-0.3160933424889	0.755862682377483	-0.418188845485351	0.675809050606378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22206023429218	1.59866712232435
Merged-chr7-100527238-1	1.34111750604956	0	1.51361447308982	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125334055-1	4.49480390365301	0	1.31129273753609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180945880-1	3.21003449664047	0	1.35194262797107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25397426-1	2.00678380764662	0	1.40009835118079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93212892-1	1.63004576313765	0	1.39275165127506	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40020272-1	2.5112701472325	0	1.40532039457673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75361930-4	3.55410350578493	0	1.33289958852052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47693353-1	1.93145441967585	0	1.39078049660347	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35634469-1	1.92290660552897	-0.50426345009737	1.35011417446324	-0.37349689354817	0.708778656927744	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63669981260615	0.961728545204858
Merged-chr12-44262804-1	3.8842763831605	1.05812071237112	0.878705934876127	1.20418068249452	0.228519750676961	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84241681574952	2.48586599042228
Merged-chr19-5811315-1	2.68145676855573	0	1.40229810665017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116737645-1	2.53302167326679	0.502647128201644	1.07425429279702	0.467903299592975	0.639853743774858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25608071324608	1.26501898168246
Merged-chr4-101739363-1	1.11761375994948	-2.51129491528352	1.81720512286845	-1.3819545651068	0.166985652206864	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7143274281758	0.306240821987646
Merged-chr11-43367988-1	2.02026066191313	0	1.50985671190772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131787741-1	4.17220101154063	2.89668989427324	1.00740898225778	2.87538620886746	0.0040353357010894	0.0553365586058182	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11839576119226	3.68120246676765
Merged-chr14-61720611-1	2.55519585955134	-0.115484341247057	1.15035916453732	-0.100389812857713	0.920034857071739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65569924525129	1.23021119707292
Merged-chr10-85359972-1	2.15332999154779	-0.442273239439972	1.35662679507196	-0.326009512009169	0.744417158417048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr8-71389583-1	3.74948953655892	2.32626378953928	1.58708431838687	1.46574681797859	0.142717274329851	0.799760141356524	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.729467998682602	3.19314100241055
Merged-chr15-67295010-1	3.15098606988259	0.217856195618465	1.03511065335838	0.210466576603803	0.833303535428121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31959125495611	1.28311275482176
Merged-chr5-48839533-1	4.04629776282015	2.92817621437623	1.02613418204608	2.853599719812	0.00432269589427482	0.0581574811421211	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1441778002096	3.39684927643362
Merged-chr14-51235442-1	1.98135356737035	3.20504863920526	2.24895671693003	1.42512686663902	0.154120531719471	0.845676401523263	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.12993703678855
Merged-chr1-40444863-1	1.08420840737262	0	1.85551350091976	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105214501-1	5.83075712100046	-0.664345982971472	0.732360903730645	-0.907129230393505	0.364338462211676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19785059987037	1.77593054045931
Merged-chr11-97971423-1	2.7877401222527	-2.29647541063557	1.18577964125784	-1.93667974278892	0.0527845034821938	0.385607173230569	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64891299416121	0.683637474991079
Merged-chr15-30737093-2	2.25562400323124	0	1.46335367773757	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-37144168-1	3.9352800053627	0.311471631311746	0.858667489098152	0.362738353630788	0.716800346229734	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91830634511476	2.08137696679909
Merged-chr2-35416699-1	1.4312392049549	0	1.60919325953242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85518405-1	3.22331198670259	-0.82225265961431	1.08376610385721	-0.7586993694376	0.448032414197102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62315127086272	0.733321818366247
Merged-chr8-25715424-1	2.42336815636873	0	1.40002284805477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102515642-1	1.19415196517064	0	1.62110582123392	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67941174-2	2.73664539159234	0	1.35287977869428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88237507-1	1.91855050835365	0	1.43741295030161	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93025574-1	1.52480823989137	0	1.54762400097985	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-113276531-1	3.54102539209151	2.81483717357768	1.20420118620584	2.33751403488198	0.0194124720351121	0.183180851639918	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	2.4851130237326
Merged-chr16-21192772-1	1.45024549536066	0	1.46185168923597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-14184561-1	2.30398358559235	0	1.36228271100896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54794560-2	3.52978894033426	-2.32489662543494	0.954794469797429	-2.43497077012626	0.0148929927066672	0.148761464599492	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94902394298366	0.918668513615376
Merged-chr12-4973144-1	2.07032924194117	0	1.37076490940475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139789915-1	3.64716345093251	1.77835909860325	1.1223713020046	1.58446593870231	0.113087726877429	0.67989977003703	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648566509472229	1.486851288245
Merged-chr4-141603033-1	4.3152634167046	-0.270920246545048	0.845006573600036	-0.320613182203813	0.748503546636857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74569305433285	2.73233913320731
Merged-chr5-101990365-3	9.39899710278043	2.42818726982562	0.494670560331716	4.90869573519258	9.16840935534392e-07	7.51640691668492e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17287996327889	4.71778094190356
Merged-chr2-19140546-1	1.67303579778724	0	1.83304453125267	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121479563-1	1.40978488202705	0.130870978384197	2.14344143238316	0.0610564750718143	0.951314232304052	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90872940996959	1.69895031910627
Merged-chr5-58305180-1	2.1867880987163	3.21202586005163	1.51121725500691	2.125456051676	0.0335485774809399	0.278807750740111	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.993458951033742
Merged-chr3-19258778-1	2.07246976197093	0	1.3857317541022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149056364-1	5.17236832654841	0.347893925466653	0.78470740787765	0.443342221539083	0.657518220833992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99417231744145	2.91736041455309
Merged-chr8-120276666-1	2.11558806430242	0	1.38529595802995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110777283-1	2.8152241055102	0	1.37324299261348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74376865-1	0.779317710867473	0	1.96582354315874	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114886568-1	1.93518837319209	-0.95388992936101	1.22562457867244	-0.778288838164646	0.43639875421122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29958811612762	1.31495854024319
Merged-chr12-41295962-1	1.59422331582078	0	1.59540660539159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101367468-2	2.89788183787295	0	1.33960983971351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106675667-3	9.04566723665144	-0.319084373829309	0.633012919225392	-0.504072451190676	0.614210465144076	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04546396274794	2.25049756766703
Merged-chr10-8876696-2	7.34146932270875	2.34213122847317	0.640223216991004	3.65830411380735	0.000253889680196063	0.00656017202138867	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03064283821226	4.2909045646649
Merged-chr7-109210001-2	4.702604057916	0	1.35170207489162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67226373-2	3.77491672400802	0	1.37187681291196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43338500-3	8.74547914356185	0.841674745252307	0.638354966286278	1.31850583093114	0.187334374408919	0.972555178368573	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19126706407226	4.02922331852618
Merged-chr6-39567724-3	3.36690028208446	0	1.31358736072912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137949700-2	4.37122215542789	1.80617956887309	0.994594862251286	1.81599527347724	0.0693710971729386	0.472151204651895	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74757039859571	3.00267996267207
Merged-chr14-52124127-2	3.06100421191559	0	1.32498229521463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27643351-4	3.38912960799434	0	1.34378674888388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102693102-2	3.11837827958659	0	1.35561970386264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-67997018-1	2.94961966734469	0	1.33073963932806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8648437-2	4.86468552415159	0	1.33537082612871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-98335294-2	4.43262850575856	1.69625250997782	1.61315496849611	1.05151243563362	0.293023300981098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27385319893009	3.31517291131361
Merged-chr11-119305495-2	3.08508438439975	0	1.36123093795986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18716566-3	4.16189534795666	0	1.33549352417394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75898530-2	7.98107516339772	0.845280668673715	0.642263134018233	1.31609713200465	0.188141443472087	0.975066312129498	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57073246476278	3.55864067482421
Merged-chr4-45097671-2	2.9198736935989	0	1.3700136624909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118653139-2	3.19807113596057	0	1.31738125687732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119189514-2	4.48594863827249	-0.0422831580065244	0.917142633012591	-0.0461031430494453	0.963228040882853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42359652454691	1.29358708977899
Merged-chr1-7204932-2	2.87348609426271	0	1.32007981854828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100369196-1	2.18567248611454	0	1.35554434232568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131090409-2	6.06209390336578	0.815730850769747	0.495345013971565	1.6467933011567	0.0996005387435856	0.618737218817221	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32999495653314	4.0505309163806
Merged-chr4-55630894-1	6.16124353335432	1.51921360439953	0.967012645113686	1.57103799218771	0.116173824229883	0.693540537011321	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08439913072267	3.08225890031947
Merged-chr16-28518868-2	6.59415631314919	0.21592680523314	0.478425707605551	0.451327764793037	0.65175333680214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63041022426998	3.8365555241165
Merged-chr8-95204108-2	2.93071395222724	0	1.3475201965854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80629511-2	3.02678681886477	2.34078593490175	1.29334485072583	1.80986991488626	0.0703159625941179	0.477289590908406	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr8-71709935-2	5.16281554503933	0.643554009109777	0.961229257444322	0.669511465787915	0.503169269145387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84549803888929	1.15637648126681
Merged-chr10-54131914-1	2.17106422040414	0	1.36377869658865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107139906-1	2.20147961535182	-1.1365857654754	1.46954322479235	-0.77342792392922	0.439269169376664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	0
Merged-chr14-19916689-2	2.06227599779284	0	1.36388977677825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31344443-2	3.84609451331266	0	1.32453088261042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108343500-2	3.28397029529381	0	1.44004214159665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47638191-1	2.20861996975244	-3.29932279476826	1.24091287763277	-2.65878681270697	0.00784225687982349	0.0915270794907922	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30594541537507	0.469435083901436
Merged-chr16-87634924-2	6.5865554363685	2.32680437354713	0.636910483093142	3.65326750824866	0.000258924231477879	0.00665375628431034	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53936365641826	3.79221991904376
Merged-chr4-117189553-2	9.21405519721176	-0.0598211332197719	0.646594426518595	-0.0925172422871968	0.92628709260825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6802788973886	2.21223900508026
Merged-chr15-60835123-2	3.3800392541245	0	1.360971391237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96963775-3	4.01916174646132	0	1.32890667764202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123284160-2	6.48982435135598	0.973318506404733	0.521339186169156	1.86695827251498	0.0619074152060795	0.433766139087808	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21263396575952	4.24011832717172
Merged-chr11-98975474-1	3.20361762657763	0	1.33005556656929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26581709-1	6.5641130446352	1.06955424072672	0.651147875165569	1.64256735147106	0.100472480405641	0.623028535261628	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04464393107727	3.40889715280424
Merged-chr14-45644278-1	2.21793361236761	0	1.40721815805539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153790852-1	2.59093019488202	0	1.37060053367422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32949512-2	3.20744644090226	0	1.38727894097785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65448834-1	3.13030491080178	-3.03784476773365	1.01518708730605	-2.99239894372084	0.00276794289817742	0.0417241053343256	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.59813273407049	0.683637474991079
Merged-chr16-39192483-3	11.0471974480482	0.302953938619298	0.554933102753038	0.545928756306545	0.585114910565082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18512583278276	2.94927155803805
Merged-chr8-125518015-1	1.64779792077946	0	1.54325420808278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61087978-1	1.93757042616689	0	1.42253732431598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5705043-1	1.67003516816823	0	1.37409154392483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171479070-3	9.3441031359937	1.54770291577067	0.524028702947797	2.95346973756293	0.00314223415779894	0.0459203454764726	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90499694310153	4.26247627553437
Merged-chr4-138429945-1	3.29761191085057	-0.164002916224963	0.93050891776374	-0.176250773199579	0.860096933821155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32352802618794	1.5268023559189
Merged-chr2-3660127-1	2.17083232929435	0	1.34245259849323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66706012-1	2.73397670870361	0	1.36993658555356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-62847934-1	4.03363121434088	0.561759864806013	0.892657784592854	0.629311562058728	0.529145103393811	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52485024177958	2.51230400961377
Merged-chr7-125562872-1	5.51682950522465	-0.23926429649691	1.42578588652089	-0.167812221146856	0.866731007762411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89010880057784	1.84883647187319
Merged-chr8-117407672-1	1.97514334406137	0	1.37642791763467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181436518-1	1.86771517972984	0	1.43176971156687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9694956-1	1.84292065578168	0	1.50674929639485	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15860202-1	1.85336889885374	0	1.4103339318276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8557284-1	3.82959441757506	0.184173776815974	1.14201453596045	0.161270956731808	0.871879996985014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99952568368861	2.2037485121767
Merged-chr7-126772881-1	0.850001333982022	0	1.72702395837208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57341043-1	3.95070224665828	-1.36326578768317	0.903065736781809	-1.50959751007866	0.131146157093845	0.754855701704781	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26161064730348	1.8405601103675
Merged-chr5-3968577-1	2.87944728832798	0	1.34121483663966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58546829-1	2.96475325858192	0	1.36215693951776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151962932-1	2.31393085158081	0	1.40005205654014	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90226043-1	3.11959392079331	0	1.35665476057221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118480929-1	3.89215869564781	-0.410891646854041	0.941124219413877	-0.436596613261042	0.662403919226113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.380355833161	2.21043983090998
Merged-chr10-34152093-1	1.93131309069648	0	1.40837116654187	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165074744-1	3.05400164460355	-0.598671405006771	1.03718226870261	-0.577209448205892	0.563797975262881	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79420042865547	1.31470332505763
Merged-chr5-54206175-1	2.37961318209078	0	1.36806587491056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143820833-1	4.71777982634331	0.477569938043465	0.840257457288121	0.568361439581616	0.569789568099318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2146791761984	2.3697525094638
Merged-chrX-94103103-1	1.79904069177966	0	1.41662575032986	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53876834-1	1.27733477472479	0	1.74900514257794	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88290774-1	2.04510553852521	0	1.38823597281138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119729521-1	1.36887123110733	0	1.59298485785668	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37355070-1	1.94993259737565	0	1.38308697479108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58590840-1	2.05767045098109	0	1.36140146136431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53120966-1	5.16941140862913	0	1.33343358027531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27384940-2	7.24947029237038	0.484431490384119	0.704761784887038	0.687369123542596	0.491850149710495	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72327139631926	2.30255876332307
Merged-chr4-63773562-1	1.71952061334102	0	1.48971171911784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3372043-1	2.54634245360076	-0.0435914698375022	1.17040315358713	-0.0372448328628475	0.970289791936861	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47923142314924	1.76628008406346
Merged-chr17-47523226-1	2.9860943784638	0	1.32493649226012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138859919-1	3.51864209897659	-0.253498232817426	0.93411096317853	-0.271379143174639	0.78609944169131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27191286310013	1.88086620139027
Merged-chr6-48429106-1	1.57787418425523	2.50441021095376	1.48618044308796	1.68513199228362	0.0919631084503591	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr17-34183092-1	2.74717709134666	2.31585306065273	1.45734885940241	1.58908626833685	0.112040917501781	0.675283692590977	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	2.42512484922428
Merged-chr3-60515666-1	1.98629940144804	0	1.45371975192177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75028414-1	1.96234395168723	0	1.50401700293438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86887843-1	1.46684856291911	0	1.63783238231516	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38068827-2	2.95976940891063	-0.813944496289086	1.10438089085556	-0.73701428830277	0.461113660346301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82687071138723	1.34591112769102
Merged-chr5-140510755-1	1.66743983296546	0	1.41083683416981	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-98591218-1	1.4875777872593	0	1.51985981833876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62155332-1	1.11809890332507	0	1.58641929580757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47146521-1	2.18707235229758	0	1.36516960172716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51585965-1	1.30250157409964	0	1.47564886456547	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23741573-1	1.57714060212203	0	1.69310749000231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72142770-1	1.13172006602136	0	1.84349110142253	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47788180-3	8.76546983255385	0.486835439273335	0.482755876361862	1.00845057121255	0.313238205630396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17428091648804	3.54208655879031
Merged-chr2-105424932-2	4.3352134797704	0.377979231881236	1.23745960078673	0.305447734730839	0.760025170632149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94962073865759	2.42414254605024
Merged-chr10-8864060-6	9.95613854240638	0.951289521545144	0.547786138520844	1.73660750911634	0.0824564731862167	0.536809356315652	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1019562731417	4.12342749984879
Merged-chr1-82797239-3	4.84445977009305	0	1.32854970074719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167279247-3	4.31425500090825	0	1.30553149658635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141853687-4	11.3080456286055	0.95803022552253	0.520725096021149	1.83980037229398	0.0657975507686419	0.454023944300705	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18467271093471	4.15094180428848
Merged-chr17-46341905-2	3.77905409590575	0	1.31923395161054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9334392-1	2.46288222279725	0	1.45299251185911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-7077969-1	2.78058394506845	0	1.35497142406182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45478235-2	2.76104759937669	0.807355257384372	1.3343056868261	0.605075182812732	0.54512904302483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.469435083901436
Merged-chr9-123991717-1	2.38621919294371	0	1.33798174823196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102688807-2	5.38845659610278	-1.79859890443153	0.785234371685087	-2.290524930247	0.0219909050824932	0.201885106215812	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11992325827937	1.19380919831911
Merged-chr5-29230678-2	2.11397888708284	0	1.42317404390029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84631746-1	2.0377060953277	0	1.40657736035214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54737063-2	3.77696766583107	0	1.32268930769215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-119868284-1	2.00235382363248	0	1.36600846431474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127774158-3	4.09220174398716	0	1.31695256706049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43276341-1	3.17177264216043	0	1.35104147949087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132099103-2	2.43392335165857	0	1.57336056380826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-83746231-2	2.42146108334124	0	1.3729495162176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86694671-1	2.55889803660393	0	1.34302028172418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-109530116-2	2.66617835197194	0	1.34047336348445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167680789-3	4.44425613464446	0	1.32345347686243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120549449-1	4.88780837109198	-0.190377330405531	1.13451624013963	-0.167804852561741	0.866736804843346	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44483879483054	1.03295826569721
Merged-chr16-34096019-1	3.14200352235651	0	1.32215207825873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68080071-1	5.3915216348922	-0.115892598681379	0.69607462795321	-0.166494502208992	0.867767809391874	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36799726138013	2.70122227302391
Merged-chr2-60269528-2	2.28932287023338	0	1.33902874843504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58341866-2	3.73234357139725	0	1.33428153218407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152173223-3	3.2457955479079	0	1.31060804351766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82892739-1	3.19319637190167	-0.99452924371588	0.860265569080809	-1.15607235656139	0.247651562000283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58749367011686	1.77338015316878
Merged-chr5-63886956-1	1.3614149788608	0	1.42172985656463	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-31936769-1	1.10788123477891	0	1.61712987177787	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10852375-1	3.3360659845227	-0.866494692342652	1.31662552010496	-0.658117801235978	0.510462438081424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.915395307324	0.958904680953568
Merged-chr8-13965088-1	3.32818932930865	0	1.35439991001518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-98968183-1	6.25016107369408	1.950069530411	0.664240905861522	2.93578656960574	0.00332703146881054	0.047961217375004	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97507281109034	3.96241916156463
Merged-chr14-88923850-1	3.5522540948723	0.401961994692108	1.28451399593531	0.312929244807038	0.754334418465054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12000521415173	1.46894927517136
Merged-chr12-8494319-1	2.29767738822918	0	1.36038470868431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35160394-1	5.69454135660035	1.65321621338697	0.96444134582164	1.71416978393697	0.0864975485191503	0.555724000150663	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54055947754965	3.39645712883637
Merged-chr13-95924353-1	1.97120118225454	-0.20911680536718	1.28026111837126	-0.163339183207577	0.870251384410636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06630003782976	0.683637474991079
Merged-chr9-105479972-1	4.11170932924294	2.20361687019057	1.00348253635114	2.19596932718265	0.0280941388875375	0.243544653720487	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.94051118279724
Merged-chr5-28372386-1	3.47096019176972	0.0373097187638019	0.946641987023249	0.03941270224145	0.968561352854569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80833461387648	1.31734301959449
Merged-chr13-112473756-1	1.46989557425612	0	1.47686299243662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21384317-1	1.17290351913728	0	1.52942490860609	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143506063-2	3.13637184134899	0	1.34511312051772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11584129-1	1.64217710126099	0	2.10196941774667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66126043-1	5.87951299597837	-0.336690462259899	0.630622725511886	-0.533901568464096	0.593409636857826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07545475352497	2.36809407398891
Merged-chr8-10170099-1	2.38933575199588	0	1.34838298439414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55618588-1	4.5294513841014	1.48469608214917	1.02311253880772	1.45115617865396	0.146736376107147	0.816054062391287	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36616230383425	1.63820361928913
Merged-chr6-53854632-1	2.11188522456577	0	1.41010922454385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15886863-1	2.36570114374383	-1.15397263896544	0.887988623658892	-1.29953538617486	0.193760257699743	0.995319377379719	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78045903446348	1.59660587240438
Merged-chr5-129594266-1	2.44133021052852	0	1.38297022023748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158340378-1	1.78925976503503	0	1.39334908659758	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142527109-1	1.8645519073492	0	1.41203999564444	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95291790-1	2.4407340895965	0	1.34479603996137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13649741-1	6.21479868209723	0.997605396056628	0.631791527342725	1.57901040593642	0.114333670243968	0.68512132194061	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38611001143627	3.75086488476191
Merged-chr19-60883304-1	2.83627009020748	0.84688974444989	1.00538690135815	0.842352076902782	0.399590909259507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93495063140886	2.4707788411593
Merged-chr11-119472725-1	0.90444257848121	0	1.7664676864505	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74935780-1	3.4734321340084	1.23910329227148	1.20078106754016	1.03191441451506	0.302112212698352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2109100021078	2.36155420913382
Merged-chr3-96088019-1	1.53263707338279	0	1.61994169861903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166773747-1	2.80540401901019	0	1.38714409896499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51931540-2	5.90303278562064	1.35950419025588	0.673088064582813	2.01980136298883	0.0434039957210867	0.335376315997414	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88590870111038	2.54941039039605
Merged-chr17-86233950-1	2.67529985407761	1.19288483488143	0.997017959186894	1.19645270568072	0.231519944090304	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27949250120674	2.30302996175038
Merged-chr2-181533370-1	1.9839545922199	0	1.38746554012524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22928429-2	2.13262729169195	0	1.40458838960556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129530626-1	2.57566739727655	0	1.36998842606562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70021947-1	1.9663588130195	0	1.44566451828228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8270881-1	1.98517830382366	-0.928929743093539	1.50692265465487	-0.616441554066552	0.537603134888917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05552087422678	0.581381506691384
Merged-chr18-5085230-1	1.94142841411384	0	1.36804337498594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121721536-1	2.97051293285588	0	1.34429111775484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44009328-2	2.99061129362349	0	1.32802060685824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74826379-1	2.77848659867532	0.142439868582029	0.988628226290763	0.144078294341696	0.885438644479937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68975439900691	1.79586598792836
Merged-chr7-89372152-1	1.49218871979541	0	1.502775457417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155700579-1	2.99454443902581	0	1.32643625068619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-89603983-1	3.89940979502601	5.23694287888153	1.31811034019306	3.97306865684285	7.09525868845794e-05	0.00242113198044894	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.90139991839778
Merged-chr4-7455324-1	2.49215112064548	0	1.37690124234553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68187502-1	2.84904507715997	1.80987597570983	0.976971337258855	1.85253743552795	0.063948687087263	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31925312226969	2.48853090112376
Merged-chr11-87143646-1	2.73584690339018	0	1.35036312321248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77388410-1	1.84400918636381	0	1.3694582527717	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69124738-3	6.5986436354773	-1.02329066778899	0.779676280431626	-1.3124558146395	0.189366385176572	0.979602264546253	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54468236397107	1.26637849737819
Merged-chr13-112509689-2	4.09838606727908	-1.53912016533407	1.18515291196412	-1.29866800291899	0.194057889451478	0.996221764796626	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	0
Merged-chr7-140990754-2	2.90063738859189	0	1.36371163197087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99235381-2	7.35267255843986	0.873382744590287	0.497666043035012	1.75495747964633	0.0792665811033784	0.521836994638461	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32140895893392	4.12210631866579
Merged-chr5-31772755-1	2.86013254235481	0	1.35051504346242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36019555-3	4.54830428838671	-0.969050535717207	0.727059151609122	-1.33283589591371	0.182585663064721	0.954194076985547	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04228644019592	1.34710871808755
Merged-chr19-17126819-2	6.86860645353384	0.613893061217297	0.636852150554382	0.963949106056878	0.335071442469036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01179163616756	3.65871952545664
Merged-chr1-191852645-2	6.79719056953538	0.169455450554152	0.617340796355469	0.274492551852314	0.783706126656014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40398031574135	3.30474505539355
Merged-chr15-36852579-3	4.32969544170564	0	1.31189852207685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-55096356-1	2.23889901532718	0	1.34697750070579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106575996-1	2.66289134158906	0	1.34643899307054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42911773-2	3.08195038683059	0	1.36396885117463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33346723-2	3.71663977483752	0	1.34696001922105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11218333-2	3.06528132992191	0	1.31798297799423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121389885-2	8.18648256586465	-0.52444287298829	0.621754368087689	-0.843488843675202	0.398955102596661	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00174226610961	2.17813337661218
Merged-chr17-49983154-2	3.67045478908124	-1.49691490153578	0.934006699693517	-1.60268111784098	0.10900507437761	0.662116154515644	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35993763175197	1.41926493179619
Merged-chr3-121536885-1	2.53222566276887	0	1.37094784317839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134374120-2	2.80440540778774	0	1.34144995578072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26649742-1	3.32053021073064	0	1.31624494620195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95590415-1	1.53701696018183	0	1.56837880173316	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71988649-1	8.90959870088389	0.166423636979858	0.720481944559177	0.230989323516891	0.81732309636549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89198130382769	1.07548707252649
Merged-chr3-89331039-3	4.13892325863942	0	1.30704252159883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101653048-1	2.3740634514634	0	1.35035997736146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73844541-2	3.42002882210643	1.94707914004331	1.27786511713224	1.52369691756898	0.127584439830491	0.7405073137564	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr2-76644309-2	2.9749124274935	0	1.34893651420539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180265606-1	2.39458886661013	0	1.36133528469196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-111478299-1	2.86827703716715	0	1.33685953609964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57871163-1	3.91601630896686	0.15205804289821	0.940523942342935	0.161673760818272	0.871562768500564	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51029195531272	2.51293337199719
Merged-chr10-111925674-2	2.64539060434713	0	1.34157639990105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41662869-1	2.75748526570776	0	1.3276149698918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154677913-2	2.5417549093875	0	1.3475572122717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36497245-2	2.92376780697024	0.804543887175429	1.13566897453398	0.708431686711854	0.478677220776335	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	1.07938469868934
Merged-chr11-76647772-3	3.58097701861082	0	1.32366467902155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-25006988-3	3.92392931338206	0	1.34143492284419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12005811-2	3.61633836853588	0	1.30915608147705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-113824086-2	3.11555577733909	0	1.31778411252664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115987527-2	4.13705409632444	0	1.34380807526342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-37251189-2	5.81663281840146	0.488058516189009	0.609335547053328	0.800968396721971	0.423149941834555	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98450303359838	3.60903350546381
Merged-chr6-72940699-2	7.94495640854497	-0.777747653867119	0.611151521239747	-1.27259382794209	0.203162209890845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51550983263812	2.46859289591319
Merged-chr9-121679715-2	6.1594218866108	-0.177485225859168	0.615254356775003	-0.2884745534993	0.772983506344998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03057127199879	1.70909952950021
Merged-chr5-30806299-3	3.70684617510862	0	1.32782081799541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11768899-1	1.50591770118484	0	1.65408255624996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93748802-1	3.52377141158364	-2.14063891716321	1.04988179919466	-2.03893325782506	0.041456689109355	0.324124049597979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45730405234242	0.581381506691384
Merged-chr4-72366998-1	1.75563768593147	0	1.39948156616343	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45242617-1	2.10296482619367	0	1.35937579845442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-110020502-1	2.39937151783406	0	1.34470961520896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72334307-1	1.10240638003246	0	1.55616564653927	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143009464-1	1.83466972699799	0	1.44122743330587	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-36095658-1	1.40035777081023	0	1.59037393057795	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135148734-1	4.11618093618065	0.905505206686921	0.76828426465788	1.17860699267366	0.238554705892687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0493253463187	2.39918060752532
Merged-chr8-39599080-1	3.6622501808707	0.571905729580065	1.0808439712125	0.52912885190866	0.596716068017801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79875826593859	1.77720628303105
Merged-chr14-45588148-1	3.13844632024021	1.72690147023924	1.18724566924125	1.45454434156233	0.145795449277898	0.812134138045044	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974761006698163	2.37496550679752
Merged-chr1-153931415-1	1.30533134214989	0	1.55557628208774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125067323-1	1.62066153698799	0	1.41530710533038	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23842563-1	1.38011795238889	0	1.42809345358134	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60774652-2	5.64542433002409	2.67253948414752	0.934780459076363	2.85900230176848	0.00424975701068333	0.0574600913759804	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	2.37441905672497
Merged-chr10-83819858-1	1.97134907343915	0	1.37777868505219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81109101-1	1.77428883466231	0	1.3783829916445	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96878781-1	2.4647387588016	0	1.36136146432169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136794318-1	2.62946096278173	-0.694136837844535	1.14260416058256	-0.607504209936212	0.543516349608838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37615232128669	1.354969417986
Merged-chr7-43926146-1	6.36309597004458	1.91490335387562	0.646264713353098	2.96303250712897	0.00304624396790539	0.0448131153369531	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96036731294276	3.84757038392282
Merged-chr7-99135509-1	1.82113280952726	0	1.38648897091637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96639405-1	2.10846189039798	0	1.37265261565269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30362554-1	2.48061559393002	0	1.433918544924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11005637-1	1.94680266885386	0	1.44352107035308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105712025-1	2.87312179505351	0	1.36247887410143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74848038-1	2.01055467340057	0	1.38682702289632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103368656-2	2.92916084049659	0	1.32100117734157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83592053-1	0.947565448643195	0	1.80658989829529	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90625179-1	3.06727995238837	0	1.39092988981097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50056618-1	2.384017889751	-2.43958504732479	1.3724305043711	-1.77756545016661	0.0754752524401026	0.50352280203685	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13453475204893	0
Merged-chr18-54987146-1	2.53628721883747	0	1.33044597974572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4046133-2	3.94536426657174	0	1.3443715926854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94509010-3	6.64690699600325	-0.608261819376058	0.642921037705784	-0.946091018496759	0.344102164373044	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13957408884998	1.72678076939999
Merged-chr18-23898403-2	2.50996763742235	0	1.34816016396287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102878852-1	4.49968204609942	-2.62968416986779	1.1100137962029	-2.36905539270171	0.0178335823043997	0.171392270411313	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70117488141791	0.469435083901436
Merged-chr19-42552788-1	2.70843165561209	-1.78042094827301	1.19899314380836	-1.48493004940617	0.137562354963482	0.779969600645874	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0828804357107	0.420961122473315
Merged-chr11-19761772-1	3.64900385538065	2.88006478965077	1.11152236097743	2.59109928037629	0.00956698871873202	0.10725071964561	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.693685200438289	3.93708630342313
Merged-chr3-8973470-1	4.03325662462725	0.950528197487097	0.923748276735566	1.02899049603228	0.303484140905692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13897078924445	2.56406040556804
Merged-chr17-51904152-2	4.43203444615897	-3.82440626795803	1.1191306251818	-3.41730105664544	0.000632452989862859	0.0132039211104084	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63788014478292	0
Merged-chr6-131779283-1	3.27146976245099	-0.328005334179599	1.29927965110382	-0.252451682669654	0.800691956413354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5291506107887	1.84883647187319
Merged-chr12-108630258-1	1.55664607053579	0	1.42638387247705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-63114721-1	1.34661444537055	-2.28538901356187	1.52712179988932	-1.4965335533338	0.134514670933445	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36233438392066	0.581381506691384
Merged-chr17-17516518-1	1.32474476749884	0	1.5168130013124	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94090063-1	1.37626772414774	0	2.25206338972286	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118201709-1	1.72038506211368	0	1.43449228697528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92678760-2	2.82309002791981	0	1.33285831945447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21312057-1	1.86281695565341	0	1.40162372789907	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125349864-1	4.03772675392388	-4.5609178917255	1.25791996460426	-3.62576159061151	0.000288111074218365	0.00723595440749298	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45447673772062	0
Merged-chr4-151141743-1	2.6876247427956	0	1.37896105108431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83659172-1	6.55372003119042	-0.860818529512916	0.735457060070699	-1.17045382558455	0.24181838561894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.48465221621724	2.11991144157958
Merged-chr6-112796763-1	1.87447044446108	0	1.44451450479547	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107057860-1	1.90267063473686	0	1.43724705088052	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21261976-1	2.72476512895922	0	1.37391030200079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48428337-1	1.71973818867456	0	1.3826805128767	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73946263-1	1.90917339676005	0	1.45830763391834	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41107614-1	5.38994999797535	-0.98009358692265	0.773460580581726	-1.2671538944952	0.205100267846206	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15909933247598	1.94051118279724
Merged-chr9-111287192-1	3.94571097364728	0.586776727852455	0.93492603687143	0.627618340607994	0.530253991021787	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20323070518129	2.48834673140933
Merged-chr1-189675544-1	1.60151930894072	0	1.39003321497489	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191307617-1	2.96897593888793	1.54846051825997	1.07398606177988	1.44178828139888	0.149362109759993	0.826926749502374	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25616074802037	2.20343104975611
Merged-chr13-83069059-1	3.29273505248828	1.69007063718793	0.990707006944005	1.7059237749829	0.0880222725423836	0.562643394459023	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	1.40264952818025
Merged-chr10-95894932-2	2.92697617415126	0	1.31967321265328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63385565-1	1.68349199496225	0	1.65656037751776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80809734-2	2.07955572942557	0	1.52049668422233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43890325-3	3.23777339447376	0	1.32106347021694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-123687690-2	4.45263772788396	0	1.30924942202343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45438224-1	1.94317929565161	0	1.35634230665107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158134081-1	3.02336435211492	0	1.34959199806806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142630603-1	2.30965269293938	0	1.38371494230728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23810888-1	2.25090419379958	0	1.36557175285358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103107727-1	2.48544155086162	0	1.32885798653879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-125849413-1	4.05526632640508	0.483477152030807	0.982216813746548	0.492230580116667	0.622556348741748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50813721080479	2.25516725910401
Merged-chr18-36493646-3	7.41513277423788	0.0346213416832578	0.624050161335772	0.055478459630795	0.955757290240714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83823474948589	2.30989861512959
Merged-chr3-142890614-3	4.29761481357268	2.39651851678744	1.10338630637364	2.17196688317056	0.0298581609263761	0.255782824317642	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	1.46928333126936
Merged-chr2-30750203-1	3.17693292798525	0	1.36916404534976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75593393-2	3.75465429851171	0	1.31126267821981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120909990-2	4.23632196104692	1.90982134468303	1.04996822750034	1.81893251115774	0.0689217270706152	0.469826744956856	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.905469781553611
Merged-chr19-60310772-3	7.49640002980006	0.283428730071055	0.652775279345535	0.434190354688703	0.664150216652952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.41890397674583	3.48677498837143
Merged-chr16-90281142-2	2.99799009832065	0	1.33010320156317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106961203-4	6.39008474205847	-1.48339861788577	0.707533895405418	-2.09657604747795	0.0360311214657152	0.293156388068448	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12366175383526	1.58756080918295
Merged-chr16-50737300-2	4.37624841761203	0	1.31788382727702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119457354-2	3.14942168935709	0	1.31876408848831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102619797-2	2.87063673988685	0	1.36024884077697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-73239010-2	5.44352224485468	-0.197073835070123	0.856648476103129	-0.230052163247411	0.818051236133715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7372497474247	0.793480537552656
Merged-chr9-75582122-1	4.73757603549292	4.28657973589726	1.04042204649063	4.12003931515678	3.78807756119662e-05	0.00146111335604779	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.60073253909927
Merged-chr17-47743130-2	5.7757824523479	1.37214186289206	0.772462339829503	1.77632201874711	0.0756798560258822	0.504321422788833	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46986688611012	2.36989781761471
Merged-chr1-39911651-2	3.81933666214906	0	1.32148849807144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101159503-1	1.90277534103637	0	1.47682853766274	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96811420-2	3.04423048617913	0	1.37533777439351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37482253-2	6.21388844667583	0.618001880879423	0.669060668120972	0.923685863368795	0.355649894427571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88490055748847	2.99699765796785
Merged-chr5-65089798-2	2.03569288750499	0	1.36384333246291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75089352-2	3.49942417930306	-0.784921123084939	0.870371368091177	-0.901823235300536	0.367150774819444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2056457506701	1.47711801254374
Merged-chr5-122627459-2	3.0433415792834	0	1.32445013551633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-77019709-1	3.30296589139939	0	1.3214907160027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36757235-4	4.2194146167289	0	1.30843176785471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-20819886-1	1.98631378444092	0	1.38731453702187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9099866-1	2.58551054134054	0	1.43189782291828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90674046-1	3.82826691373718	-4.66820000503507	1.13952451778708	-4.09662094335678	4.1922451106926e-05	0.00158993876380336	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.56312523624882	0
Merged-chr10-22164776-1	4.01570948831151	0.230804805958331	0.733139974109797	0.314816834586849	0.752900729042566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12582115140975	2.92354090869492
Merged-chr11-31890161-2	5.07067072934357	-1.21510755532328	0.693667073338795	-1.75171577551557	0.0798226928891281	0.524398684605222	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.63413736702944	1.6924856131816
Merged-chr17-87064194-1	3.63296230306831	1.43083607124754	0.960692828623356	1.48937936103664	0.136387500260909	0.775596344273722	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	1.31734301959449
Merged-chr2-117387211-1	4.80219630760569	0.135237653795797	0.76033305017607	0.177866336027982	0.858827949196366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9744764452276	2.09008352533139
Merged-chr1-156684643-1	8.82634645255738	0.183828548172962	0.58079969836504	0.316509372664005	0.751615912209888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.98927603641061	4.18872623826516
Merged-chr16-59421049-3	3.60456888060088	0	1.33356381352089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-117902474-4	7.36939191320751	-0.141503484114565	0.667633774492616	-0.211947761663351	0.832147788519434	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43467839009542	2.305479615197
Merged-chr15-64342649-3	3.60640024270657	0	1.31928076972901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37509460-2	6.61435093166735	-2.96397042968756	1.01220446804103	-2.92823290478444	0.00340894582702167	0.0488296742684256	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92553270876627	0.803125334851723
Merged-chr2-66180422-1	1.85156563085477	0	1.36730600088186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130888073-1	2.34893668157632	0	1.35220323205237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76665939-1	2.38151154655165	0	1.40705444437594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83128926-2	3.60635865121082	0	1.33971679007072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77790877-1	1.16387077219535	0	1.57251112389335	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79018824-1	1.6664999207607	0	1.51829337302681	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155584319-1	2.03378402576874	0	1.33457734285328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54963074-1	2.69925496825797	0	1.36126741752042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41054906-1	4.49933014921027	2.60724135461955	0.873321744772588	2.98543047877329	0.00283179499145886	0.0425198702922497	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16042367816644	2.93819824813269
Merged-chr14-68067996-1	4.77313213262676	0.287831869124496	0.859753538526419	0.334784163398533	0.737787907624832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64812370677702	2.55237610040301
Merged-chr1-43916189-1	2.49487648704582	0	1.35981041470202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26439093-1	5.00432670812145	-0.558894000242671	0.839714909223135	-0.665575892608282	0.505682219595473	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07436975365207	1.41926493179619
Merged-chr11-53903919-1	1.41323218150015	0	1.72726313963635	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85900682-1	3.06864490217819	0	1.33814964969017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159731654-1	1.50155957502593	0	2.39988165509275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134305227-1	3.17511087116347	0	1.32574928419398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33922881-1	2.92467882874196	0	1.35079685401668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5166599-1	1.71911433723288	0	1.48163328834175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67494534-1	2.32528922750926	-1.37548653189676	1.19862972709976	-1.14754915617263	0.251154729396765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39015077842653	0.609949614787909
Merged-chr7-38084589-1	7.55486054726063	1.02568313073717	0.597217966433162	1.71743515497865	0.0858996929920163	0.552970282558989	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90837767404222	3.99846465094615
Merged-chr8-105454255-1	2.38585498386778	0	1.42738248372747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83361397-1	1.67968491671909	0	1.53369886856651	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58979219-1	2.04505534349295	0	1.35586670099622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146571463-1	2.45395463378945	-3.55657900909363	1.16005990558226	-3.06585805782892	0.00217046326107444	0.034508781571331	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13127142508775	0
Merged-chr3-84774455-1	1.31444347609225	0	1.61249088449636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102876946-1	4.248092486611	-3.24794437261381	1.27779356674647	-2.54183810056561	0.011027123818346	0.119657660749525	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08097886197902	0.469435083901436
Merged-chr4-102623306-1	1.87003931498824	0	1.46500571342796	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-47544373-1	4.39215908753824	0.63993311682547	1.51672077559107	0.421918870713751	0.673084235580614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41869399727512	1.9421480306394
Merged-chr5-66069217-2	3.71894560394938	0	1.35233376550162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65377314-1	2.68637733011817	0	1.34563257591289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21211053-1	1.66657990105594	0	1.35846612721784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-77211915-1	2.4790973662484	3.61041424593233	1.31114393935804	2.75363683387809	0.00589371272307444	0.0738080781146076	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	2.83209945520084
Merged-chr1-153559436-2	2.64314841182369	0	1.34084901769565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45097257-1	4.00933180888964	2.79779697715764	0.928565559094664	3.01303117454135	0.00258652345837737	0.0395551045895454	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.937061192880653	2.80457862211608
Merged-chr6-5639808-1	2.32151707230979	0	1.40774354566816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-26476116-1	3.15067557135386	0	1.35608864069066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70080122-1	2.1328825329018	0	1.39047652968579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-8674219-1	1.55921830420055	0	1.62583868786721	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-133625178-1	1.84882442956298	0	1.56152837592216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120947278-1	2.66943559960563	0	1.3814428115767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121602080-3	4.52341186215829	0	1.31919333984204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142764504-1	2.22487324481693	0	1.40309856536812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61200277-1	1.92790255828642	0	1.42805495187489	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111454299-1	2.50159613371352	0	1.32514395363517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39859438-1	2.34458280661523	0	1.44168527202452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-87035312-1	3.15158971322609	4.59657178422483	1.35900787399747	3.38229959676702	0.00071881703543926	0.0146193022090924	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.73383971880548
Merged-chr6-100662246-1	1.70372381772088	0	1.65619127954323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57445408-1	4.55176562083339	-0.0337055863146685	0.848305647975982	-0.0397328326117932	0.968306125697341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2046936238082	2.61453972724791
Merged-chr17-47763133-1	2.65889380250652	1.98110803297798	1.26734181568064	1.56319945295422	0.11800568877256	0.701656027163941	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.80132158588404	1.63412505265868
Merged-chr12-57297114-1	1.90861786062785	0	1.3687096211006	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86863594-1	1.95135169290126	0	1.35986156044494	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53221444-1	2.2395770380894	0	1.39882850519474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-49638043-1	2.93713209413314	5.19648563747131	1.23585519533696	4.20476901911999	2.61348919039251e-05	0.0010870850708809	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	3.21849178465054
Merged-chr3-27646047-2	3.10040921941178	0	1.31894696329711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77591043-2	3.32109982487652	0	1.32162839627317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4355519-2	5.75247705457024	-0.046048145765142	0.802527725128642	-0.0573788846457119	0.954243382897655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57064063048209	1.86737052669785
Merged-chr1-34178076-1	1.71350759380231	0	1.45370493560163	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15285566-1	2.71961081073574	-0.359753087352028	1.07484176128246	-0.334703302672929	0.737848909841447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.981953565221666	0.683637474991079
Merged-chr11-119339867-1	2.40594684246263	0	1.38974216541876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160231257-1	3.19216788495662	-0.381677814231965	1.0105344367892	-0.377698968324801	0.70565423428965	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96888762713482	2.19779354260537
Merged-chr6-88027569-1	1.93235149543303	0	1.37288762787121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68197521-1	1.3294524268675	0	1.44197138192843	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11564529-1	1.47263329775389	0	1.52317856922492	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75228622-1	1.71550685522724	0	1.41435649659279	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62052642-1	2.18897159197988	0	1.43532140175602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58689385-1	3.39093235865042	0	1.36263450540708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57622969-2	2.68684759178066	0	1.35309735263545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41326361-1	1.86668777453768	0	1.4250748087851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-64880818-2	2.61669358282658	0	1.36214334722193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57806032-1	3.72902836750951	1.10751213025347	0.785949548614985	1.40913896089787	0.158794082322798	0.863301451734973	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0419580634933	3.17833142907538
Merged-chr4-116704023-4	4.01702730743819	0	1.31761739233899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125081997-3	4.21236341861716	0	1.31904427024234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28553260-3	3.52645655199974	0	1.31994923133879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-88805038-2	3.36973684601578	0	1.33041706052072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22784682-2	3.30694022581357	0	1.3610228730771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93798009-3	3.21855740634936	0	1.38024034833876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73427530-1	3.45441307721314	0	1.31655943643282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99544469-3	2.64495198278308	0	1.42472131168037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43282917-2	3.09773406844058	0	1.34462902365596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129382748-1	3.19788571250312	1.92229532825204	1.12088327088745	1.71498261967107	0.0863484135148397	0.555147917113412	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51684905879371	3.12390030088957
Merged-chr4-102785335-1	1.67926807579204	0	1.48803757184809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113224355-1	4.87880042687636	1.08449839550707	0.654718981014446	1.65643341182305	0.0976340795015687	0.609476171103316	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40337318911115	3.38549323695688
Merged-chr3-79299604-1	2.95729554891212	-0.559752304562214	0.934400139167475	-0.599049894257227	0.549139613138117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06519799150355	1.15307255889252
Merged-chr8-90965203-2	5.74373150669254	-0.682308755142502	0.771214843104385	-0.884719428370948	0.376307974446104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56116889112517	1.99186294665078
Merged-chr11-115010388-2	3.21425013851739	0	1.36143755380073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-62952838-1	3.64312906866295	1.41417736988044	0.877524972683433	1.61155227931114	0.107059402165931	0.653680606993109	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37466531868663	2.38580964398671
Merged-chr4-59867642-2	6.03159637303695	-0.252362992726739	0.60923452777971	-0.414229629509754	0.678705944414692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18193729902347	2.80193137221517
Merged-chr10-96625820-1	2.28764338568457	0	1.51080644290942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75096998-2	3.20306824520479	0	1.37087169544815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66163804-2	8.93219317165457	-1.2128841837229	0.668837157618965	-1.81342225070258	0.0697667202759508	0.474132247529487	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.1721625416456	2.57728790141107
Merged-chr6-87452184-1	1.61177167066638	0	1.4104761248423	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-12010732-1	3.22239403185214	0	1.40302783192298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66117037-3	5.96069819282844	-2.79054109548193	0.833597106924919	-3.3475897076659	0.000815175998403233	0.0162255530891434	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75225441259469	0.773587911294612
Merged-chr11-76457075-2	3.62641096771924	0	1.36644296038988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33396676-2	3.07933335462369	0	1.33300845279203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115901844-1	3.00994638664812	0	1.3597867615589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52024677-1	1.86195596120093	-0.851660240787153	1.42281966286143	-0.598572161333771	0.549458224849774	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0
Merged-chr9-118673015-1	5.60031448727187	1.80840920774616	0.661962222352895	2.73189186131847	0.00629718060299654	0.0777874411499834	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75233325766771	3.61796449232538
Merged-chr3-32333602-2	2.93412968859178	0	1.35119447474197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3844554-1	2.12609452281263	0	1.345714275338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136200049-3	8.81931101031889	0.095139916360974	0.481931434744588	0.197413801013822	0.843503730485806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46965750374529	3.47322877959968
Merged-chr4-140971839-3	3.56197306258479	0	1.32057615762031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43303991-1	2.29287006074013	0	1.36521823752004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40507954-1	2.23079494634945	-1.06743184918756	1.35173381864513	-0.789676069699482	0.4297169702759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.756987780647496	0.423054662900563
Merged-chr19-46424877-1	3.26686979053156	0	1.39933297693813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128668157-1	1.85804615556916	0	1.47288317472677	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138132361-1	3.85082705428369	0.258516698974005	0.916133715773003	0.282182278114148	0.777803746402466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50453578760379	2.98355470317615
Merged-chr10-122782614-1	2.34737414723479	-2.21125145284525	1.43678790828236	-1.53902426384472	0.123798372807854	0.725145972526176	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00027027317926	0
Merged-chr12-12412863-1	2.46278956834405	0	1.35467607543425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155201534-1	8.81770505306329	-0.875203300863717	0.61994283893251	-1.41174838372316	0.158024061476349	0.860304950531828	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20103912552215	2.1359713465465
Merged-chr8-35424058-1	3.09866502126267	0.0384416595293078	1.06260905296405	0.0361766723350213	0.971141486590955	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.838977036854949	0.683637474991079
Merged-chr8-14676587-1	1.5030697754682	0	1.55255027545787	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72641192-1	1.83961347786361	0	1.3911899051506	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157876885-1	2.06905996153077	0	1.38054652055287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34438545-1	3.75070016016354	1.58104197748089	1.0782924542669	1.46624598106438	0.142581286036306	0.799340830244378	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10500733051284	2.30081306793583
Merged-chr11-36878274-1	2.09520331353306	0	1.37636704021259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110978887-2	3.2503028188043	0	1.34272605764044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55593224-1	5.68466028369281	0.567142708470548	0.774836950938682	0.731951035354573	0.464198454459276	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13621122958601	2.7179682886312
Merged-chrX-109139446-1	2.60204983784646	0	1.39940875256043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12680802-2	2.14202273860597	0	1.42803453312444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53021894-1	1.32193857427553	0	1.72977838856499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58364206-1	1.93048790895656	0	1.42578943073377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170451108-1	2.12458427917239	0	1.35591349106581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60191970-1	2.05164036047266	0	1.45414129645928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8950669-1	1.27475794632211	0	1.47529480266748	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33306756-2	2.46636917221117	0	1.36240530662959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37604757-1	1.03359246473025	0	1.93975039261188	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151490941-1	1.29257881702118	0	1.58521399731386	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97769942-1	0.783579689380257	0	1.78152692083631	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36784883-1	2.79422165230889	0	1.37159493821905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49869994-1	2.74908181957395	0	1.38681587194792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7203979-1	3.70915896724473	-1.73188528371766	1.22352978641288	-1.41548273115211	0.156927008095555	0.85575834690913	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.950204084877437	0
Merged-chr10-8995970-1	2.30877112440921	0	1.41586535112184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149769930-2	8.14300163979992	0.97639445912006	0.869521430733689	1.12291017174378	0.261475647061099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.430605975204	3.21344483336542
Merged-chr17-10314230-1	2.8009041956156	0	1.36647917470126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171687643-1	6.24489571531587	-0.049520198096847	0.691278145562393	-0.071635706140485	0.942891823667856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01567813657759	2.49220702424193
Merged-chr10-80940514-2	5.03733870405707	0	1.32068516890962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38225022-1	2.19343954404608	0	1.43730402613152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36538512-1	4.11530144867029	-1.63704237828397	1.15630596250857	-1.41575191286955	0.156848153221146	0.855556954684866	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97748969577231	0.683637474991079
Merged-chr11-82915157-1	1.97234454965356	0	1.45663440343939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118439440-1	1.26715076802028	0	1.82495220957871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128447454-1	2.39453993291689	0	1.34060159815292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119429332-1	5.43094905693772	-0.485828734844374	0.660042988508017	-0.736056201343124	0.461696495908692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28027147132303	2.53837419804873
Merged-chr6-47782110-1	3.32017219241466	-2.03339337299654	1.06822743588578	-1.90352101498913	0.0569725942091098	0.408574532615067	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18902445379182	0.844015785373878
Merged-chr3-96487865-1	2.48084668707388	0	1.36878232767512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-85246645-1	5.86245079139431	-0.690963276326022	0.636500640290016	-1.08556572073704	0.277671172590628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40311904840499	2.82286752253771
Merged-chr19-57643112-1	1.44283325326721	0	1.42188939722275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-56451573-1	2.13619144101681	0	1.5704605072044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36541576-1	2.57090785408	0	1.38227511445271	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150824255-1	1.32893940629037	0	1.45410930741704	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138165854-1	1.86804487591849	3.00056315095924	1.42038324904808	2.112502490416	0.0346433725817566	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.76550025052025
Merged-chr5-65429456-1	2.2142712616183	0	1.48322062167798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178360910-1	2.11610433315507	0	1.3883406023887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127827502-1	3.00470732889999	0	1.33652011152045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133878085-1	2.87758803391709	0	1.35322920205797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58498260-1	1.87337755381835	-2.30485759328199	2.22637911692896	-1.03524937678237	0.300552464687592	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65012265171847	0.729295484888209
Merged-chr1-152529554-1	4.27594890113677	0	1.34530318856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4717583-1	2.71021195207851	0	1.34329925588928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43401359-1	3.75802202776953	1.55853413288807	1.1324717852361	1.37622336662731	0.168752489947234	0.901291394204494	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716851424248389	0.905469781553611
Merged-chr8-83782427-1	3.84797358885418	0.0816684498474126	1.29092921915793	0.0632633057145338	0.949556835005066	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72262248736099	1.81050397723341
Merged-chr14-64747353-1	1.94010200519909	0	1.5029851606643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172356737-1	1.91541252402385	0.323099155194872	1.04766362701986	0.308399706606161	0.757778205191922	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56370772468609	2.30945684676081
Merged-chr11-54927979-1	2.17617720486025	0	1.3854852772705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94806509-1	1.54105205209464	0	1.50798620649871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31082509-2	2.89391659562897	0	1.35841580644737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99136331-2	4.63128720395897	0.754342732991581	0.567160000909286	1.33003514313809	0.18350669263003	0.957781816022519	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85684450350817	3.71980362253162
Merged-chr1-52166875-1	2.98763647876455	0	1.37427907321647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104319623-2	2.54949034769575	0	1.38658870695642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97753628-2	5.00691178174285	2.5204747446943	0.811571201739796	3.10567297027182	0.001898465503263	0.0312250507868673	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26824786717312	3.71571771627948
Merged-chr19-40375865-2	5.09087355531805	-1.81282471990973	0.835106767683776	-2.17077000218514	0.0299485625913783	0.256375769225682	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19897669929715	1.34591112769102
Merged-chr19-14636883-1	2.68714572605306	0	1.3793607783528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146574034-1	3.33023998489788	-0.350749048871437	0.903144429395866	-0.388364294187211	0.697746463709904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30961517427555	2.41421900036213
Merged-chr10-96364030-3	3.86432451037093	0	1.32654332385569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54986592-1	2.72079646922418	0	1.35791981985941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63129975-1	1.87187452906767	0	1.36673453720834	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24965829-2	4.11391273497927	0	1.3257690486383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145034248-1	3.49278176259592	-1.00542580325633	0.800976688100074	-1.25524976967958	0.209388103376715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27590004303297	1.26501898168246
Merged-chr9-47739706-1	2.58536530110339	0.352247956685848	1.13552632320313	0.310206773271637	0.756403720101866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.879261964366974	1.15637648126681
Merged-chr7-46882157-2	2.52571209841185	0	1.34303824793193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32888678-1	1.38593495687189	0	1.60440159989712	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106988159-3	3.55313057824266	0	1.34248651271954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-76513418-2	3.37738844156863	0	1.35851402743823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75899688-2	2.48544476973039	0	1.38279758222065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35607924-2	3.84312787635896	-3.2013672667289	1.13469777318225	-2.82133916395261	0.00478236116341019	0.0628839558036609	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95684786952748	0
Merged-chr12-26315096-2	4.50742864490042	-1.72099508525649	0.860964053267282	-1.99891630634922	0.0456174101134139	0.346895549502004	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67899324993895	0.82780788634396
Merged-chr19-44404131-1	1.95243803757144	0	1.42018186150549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117478124-2	3.03999462643085	0	1.34887100821568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84182922-2	3.22417996242902	0	1.35331551582635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74788781-2	3.13763108503621	0	1.34552384974469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68859809-1	2.82699572476682	0.609700042439721	1.01284565753615	0.601967375683752	0.547195853939805	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63567279300143	1.69486619385668
Merged-chr4-97764802-2	2.71145303482441	0	1.36821323912737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54535141-2	2.35266893595516	0	1.43531441426992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43568462-4	8.93020138237901	0.456546509667263	0.505201796238058	0.903691382467159	0.366159069863352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34308021771719	3.75303030028359
Merged-chr1-54933807-2	3.51278490443907	0	1.3381302303815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91905406-2	4.52289631852995	0	1.31367890058041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53470092-3	3.38620856873036	0	1.34295774013255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38735680-3	8.06583150254621	-0.402170691002089	0.569350518661913	-0.706367479821166	0.479959639026909	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53179902960609	3.06496405637937
Merged-chr11-105474559-1	3.09198601754085	0	1.33048010934448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-73116936-1	2.02927575530012	0	1.53506582868849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54637223-4	4.25935842890337	0	1.32270564065869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69574692-3	4.88394878601408	0	1.30028101272995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99219234-1	1.76574003128358	0	1.55776816963511	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166035847-1	4.90594385344418	1.91051089713327	0.971433990325273	1.96669142336018	0.0492187962630716	0.366528871363085	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	1.64536602019594
Merged-chr15-27665462-1	5.71228476389084	0	1.29982720657353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22007986-1	1.98564461402245	0	1.42924728541498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118923053-1	3.26900842187651	0	1.35044073901151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18935314-1	1.20487125255401	2.01908831513589	1.73605435050819	1.16303289384048	0.244816156773066	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.03295826569721
Merged-chr11-77317951-1	2.0885125396217	0	1.37940829083256	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7851089-1	1.20924430997277	0	1.48735334083577	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70636892-1	2.6531415001184	1.29069172035064	1.0666327223526	1.21006199538286	0.22625510489271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04328208259895	1.89255009218154
Merged-chr11-26129232-1	6.52573146973614	-0.802927010152526	0.82009398024723	-0.979067069740557	0.327546841253416	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22086827539165	1.41293295987929
Merged-chr7-132308517-1	1.96622310052868	0	1.41345165169866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134946173-1	2.58196167202553	0	1.35374442652505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30686771-1	1.19179977423495	0	1.55055901194417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36937247-1	1.92725232423079	0	1.45168196340891	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26388983-1	2.96225180837603	0.0836790231967478	1.18810919637026	0.0704304145211498	0.94385108406097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1705168547993	0.905469781553611
Merged-chr1-93654171-1	1.94556796897125	0	1.42828240143254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70608940-1	2.09271265489962	0	1.39457953552041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69364698-1	1.93889172211123	0.878940859697495	1.38207040023427	0.635959542689368	0.524802791868666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.61242769162773
Merged-chr9-21309330-1	2.46831895470253	0	1.40381953713394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125815830-1	1.17380603960924	0	1.52125521141647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53007384-1	2.93260226941271	0	1.35907453609249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19990073-1	1.79614004667438	0	1.45657545132374	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25606184-2	2.73887297110783	0	1.3921339937995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29499270-1	2.35840209119613	0	1.4043694221499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34208744-1	4.7836481326953	2.50218962065244	0.87546893769029	2.85811353542006	0.00426167878582943	0.0575379466815723	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.965917299642074	2.82817855237796
Merged-chr10-59316632-1	2.74197873038301	0	1.35796829276429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45702639-1	1.54377416784836	0	1.48534292262456	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9341706-1	1.53328917378265	0	1.40540699632634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78013267-2	2.50607191632565	0	1.3313929229668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135714967-1	2.40077541697926	0	1.39314505943573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33902628-1	4.46781108013395	-1.73618467744954	0.991206255256151	-1.75158769251398	0.0798447303826525	0.524398684605222	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06675600563713	0.73596151290311
Merged-chr11-30656279-1	3.50615938878477	-0.540564177731291	0.8246095653512	-0.655539543130409	0.512120435592593	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79161936501702	2.08706762733164
Merged-chr1-177568613-1	2.32458131850665	0	1.43816343593394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90265493-1	1.96611086288041	0	1.45232467561254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59444204-1	2.7739095990982	0	1.33638389426446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68654193-1	1.54902271242418	0	1.36806196009867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102024991-1	3.51882804648959	-0.543356668875734	0.874937219042775	-0.621023608379802	0.534584089933349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16551032785335	1.51144536133504
Merged-chr16-43948024-1	1.20609098444135	2.94926729324558	1.50990868366474	1.9532752709835	0.0507869860927261	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.19380919831911
Merged-chr16-11708988-1	1.79330725442024	0	1.36661532418612	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51981664-1	2.43631966489915	0	1.36649315236735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34345789-1	3.12732846761392	-0.71727245069898	1.19019424179713	-0.602651588715416	0.546740493355677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39249772148971	1.47711801254374
Merged-chr14-61737698-1	3.52856160199946	-1.78029845845177	0.984418495177959	-1.80847725552935	0.0705322535901843	0.47831056902285	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4771920991234	0.683637474991079
Merged-chr12-25414966-1	4.91047394343586	-3.23708021386101	0.992742785861853	-3.26074413227866	0.00111120263130842	0.0205934903986047	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40515308953137	0.563523181795778
Merged-chr5-77237369-1	2.18085377709716	0	1.3982991403513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-162941464-1	1.68407140565733	0	1.37087602966762	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129590941-1	1.9977431491894	0	1.438479660648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24531207-1	2.75217665408499	0	1.34838424971636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-16714677-2	3.10350337107462	0	1.33965884757239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59786862-3	3.70678186763271	0	1.33555059880325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105930811-2	2.86200000331857	0	1.34625747252093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44094304-3	3.85437118460691	0	1.33947813933141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153081359-4	7.09130789077942	0.482557147271031	0.756750874527971	0.637669758323081	0.523688675507511	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83400293997418	2.20722616279249
Merged-chr1-43457121-1	2.42790399431477	0	1.34032013540037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60219159-2	3.59722417686938	0	1.3460299054984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-124073761-2	2.70831051475715	0	1.35426261301039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36776256-1	1.56984297101525	0	1.43198570639496	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115986433-2	4.15639303841784	-2.41585592272595	1.00052516050151	-2.41458787654577	0.0157530224795412	0.155556156852957	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96786063224582	0.581381506691384
Merged-chr9-40768258-1	3.98635834473276	-0.809530594697455	0.891188516678214	-0.908371887145575	0.363681773563962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86360572086227	1.94036587464633
Merged-chr6-30162204-2	4.36742975165514	-1.03275696562553	0.921646583394905	-1.12055638704953	0.262476738128677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68979515630586	1.45795114796949
Merged-chr10-79712610-1	2.38885062507232	0	1.36835097824822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44501884-2	3.39314055118738	0	1.34036074035135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59529736-2	2.78517674709019	0	1.40485011483366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-3943645-2	2.2647824623947	0	1.40262039748003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12590806-1	1.29131543892502	0	1.48332180310166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74379731-2	3.43410473018321	0	1.34348563377508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107357721-2	7.39767740252448	1.27244949036629	0.602485082443864	2.11200165355937	0.0346863074677297	0.285193483183301	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89841438240661	3.62711499251999
Merged-chr3-122918736-1	2.3381832714059	0	1.35250941469822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77783411-4	8.52078059978157	-1.262603986436	0.576000123755447	-2.19202033882213	0.0283780380676533	0.245419702960412	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47317135298762	1.96334085054552
Merged-chr10-127671644-1	3.47864590656648	0	1.32248782732588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-36861866-1	2.88766112610342	0	1.37236605391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174222255-3	5.37504836168515	-1.18982402242058	1.07636487996954	-1.10540955447585	0.268982165585574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37466531868663	0.563523181795778
Merged-chr5-99619232-3	2.67122389279937	0	1.415001202808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108072860-2	3.39899955443661	-4.33226799693023	1.29056476481195	-3.35687763609562	0.000788279907224208	0.0157815376279023	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67824808652061	0
Merged-chr5-100664001-2	3.29323405834274	0	1.33630886529768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154855612-2	7.6452838825015	0.519847584965957	0.865253804371426	0.600803581954322	0.547970818088441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.187085787347	2.88205150313425
Merged-chr7-19744798-3	4.70538951512535	0	1.34208062889946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67760719-3	6.45772123076489	0.661847128438468	0.641530807412223	1.03166850413341	0.302227436807488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87337535000238	2.73430231295182
Merged-chr1-153493526-3	3.57176328179336	0	1.36455724101765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105260461-1	2.74469981160682	4.41710649879993	1.15092226925047	3.83788429228722	0.000124098929868587	0.00375955895743751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.11066895928297
Merged-chr4-32411443-1	0.83633473421607	0	1.59897759470137	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34859720-2	3.08997381940949	0	1.33212800263827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79729384-2	3.14221730531787	0	1.310513814654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9116782-1	1.22121571488759	0	1.53745574182891	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92731101-1	1.73127460122602	0	1.52735393725367	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57904479-1	2.53893943577204	0	1.34094288761215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-9450102-2	3.57126798260405	0	1.34659265983346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-17834922-1	1.14118084658498	0	1.42877015355048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96883150-1	1.61929905658377	0	1.46437890468938	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96532102-2	1.79754346611559	0	1.5233595837441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156498094-1	3.75027575872721	-0.209561308379443	0.837532626956248	-0.250212710089909	0.802422856589291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62246919614924	1.53857528724196
Merged-chr2-122151307-1	2.05828613809469	0	1.37203483855283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156435020-1	3.08451305940661	2.46870160024124	1.03593340399988	2.38306979069237	0.0171689390397405	0.166333801407099	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.99726316646396	3.81794367562341
Merged-chrX-162715826-1	1.23589498497988	0	1.55196372645657	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116124046-1	2.03738885624121	-0.885138357494277	1.33583861247463	-0.662608753204524	0.50758116268094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0
Merged-chr11-121234054-1	1.98278742510388	0	1.34760071932086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75343375-1	1.59292909361259	0	1.40432092920884	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74564537-1	2.20906407241367	0	1.48949287416597	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116751396-1	5.57870564836529	1.59779187618266	0.807730734664014	1.97812440162659	0.0479146744001221	0.359806057613236	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49229650386242	2.70317705787455
Merged-chr2-58485198-2	2.45481733741689	0	1.39248169142191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31462437-2	2.61137457221311	0	1.47780860652105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162530367-1	2.36445709967463	-1.08714414194638	1.15273919740438	-0.943096360733031	0.345631617049653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34297659644458	1.31734301959449
Merged-chr18-65921942-1	2.43639809084006	0	1.4569305477758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-105417865-1	1.21500490191368	0	1.4604632513284	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-170004341-1	1.87288424771368	0	1.40636854885438	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65150914-1	2.6077669315007	0	1.34075897172783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69004280-1	4.84934415852268	-0.0987232104987584	0.713037935353201	-0.138454359303978	0.889881338136018	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83882182440612	3.24352954024134
Merged-chr5-141058159-1	1.69701465321439	0	1.37759691303522	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95871374-1	2.20381825537025	0	1.39519024437778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34946878-1	2.6006443726156	0	1.4046521142616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61714786-2	3.67725054062018	0	1.3182750130564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180407258-1	2.87374809600796	0	1.32745700766006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97543395-1	2.2212380158483	0	1.37297079745998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85037858-1	2.96360339275134	0	1.34169435724865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102675543-1	4.04684674855268	-1.56991570149942	0.862780401716963	-1.81960055927932	0.0688198564547211	0.469328150687769	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46057453878951	1.29948469469889
Merged-chr13-24862766-1	2.47774290818691	0	1.34798746825245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25785369-1	2.04745386863215	0	1.43225665250682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34718703-1	3.02023446665693	-0.453706513169127	0.833626849643276	-0.544256118145999	0.586265239347962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84208267529246	2.26292282237182
Merged-chr8-71284430-1	4.73355805744055	0.530030212940811	0.832464961876085	0.63669972577141	0.524320452237045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72291675895884	2.48291181664133
Merged-chr2-119050422-1	4.34961336159706	0.209738773004592	0.818421928526264	0.256272181492338	0.797740676107363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11443288057062	1.93847405924208
Merged-chr11-8792429-2	5.55561408314824	0.403385006573547	0.685331169345089	0.588598658016717	0.556130534349945	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46527051315276	2.89285035065765
Merged-chr5-7114810-1	3.53218983425097	2.65475489566126	1.07901763225729	2.46034431347294	0.0138803779672022	0.141457763356955	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0929074641484	3.61958354526469
Merged-chr14-40923566-1	1.06966988633868	0	1.67685602856262	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69109259-2	6.58559211112932	-0.166731837702971	0.643111386017646	-0.259258102605567	0.795436103714893	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55256778752839	2.72800862926832
Merged-chr15-31632720-1	1.53779609297212	0	1.47772243852375	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-15212883-1	2.66662537071188	0	1.3490228413238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152601570-1	1.56593787440972	0	1.4597060083306	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54998533-1	2.50041842314987	0	1.33298167439772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79126802-1	3.14370294364675	1.91289508784396	1.08692975006536	1.75990682721577	0.0784236055695382	0.518009595627923	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	1.29915063860089
Merged-chr4-33263776-1	1.68057277028532	-0.750375671470499	1.3900070716794	-0.53983586613261	0.589310230071541	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63913066349248	0.793480537552656
Merged-chr16-63275011-1	1.35027321233102	4.23217995278375	1.3887498862279	3.04747456309728	0.00230773056866693	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.56868975155888
Merged-chr4-116678037-2	1.72862250678164	0	1.85127341353049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155863178-1	3.27607038841698	-1.36004090117505	1.26390694416994	-1.07606094534772	0.281900000627168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702988096853987	0.306240821987646
Merged-chr2-128371028-1	4.08744186239889	0.933583003502296	1.12634008823823	0.828864224270452	0.407181241354116	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	0.733321818366247
Merged-chr8-88300060-1	7.38840786494402	1.46796575669222	0.629641368358923	2.3314315584414	0.0197306150738183	0.185379837902765	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10600945294229	3.90034600395319
Merged-chr4-123575857-1	3.91946221623437	0	1.32131136001035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49969049-1	4.62676516050022	0.557654895332748	0.818307295117059	0.681473694124865	0.495571806418856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09520182206846	2.64850223368472
Merged-chr4-139512586-1	2.20818623125456	-2.43181759620861	1.60433101316781	-1.51578295018239	0.129574244650623	0.748445027043188	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99265951940533	0.609949614787909
Merged-chr10-7883666-1	2.62002406723037	0	1.36229536868091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88791747-2	3.74732919704726	0	1.33647874531507	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75019115-1	2.50717764914268	0	1.45500427479978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-151930599-1	1.96715259962534	0	1.38051044125978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107680843-1	2.12075996472007	1.02163216223031	1.2299279955631	0.830643879898491	0.406174838351014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0.733321818366247
Merged-chr2-59181999-1	2.05890831072914	0	1.45074769938214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94060112-1	1.43088198835228	0	1.70037739326495	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93013863-1	3.40758981692027	2.29636207590357	1.0733161933142	2.13950193820595	0.0323950391186553	0.271883666355979	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29538016374345	3.52577376032626
Merged-chr16-45648008-1	1.01341532100837	0	1.93684884481686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-22398254-1	2.36809069650885	0	1.34414132499459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74549575-1	1.39143927667525	0	1.71482969019074	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115070455-1	2.99314406038762	0	1.3618990087197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114649773-2	5.26172404393064	1.91525578022489	1.00607162191273	1.90369725028485	0.0569496247654642	0.408454635048186	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00673585644071	3.74217319315236
Merged-chr16-11676850-1	1.40028699179947	0	1.58784266614242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99119943-1	1.99681102455468	0	1.41924947072059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80823973-2	2.81321292230155	0	1.32737566754274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30718022-1	1.86518859634368	0	1.56880399264929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57767314-1	2.1904019639798	0	1.43389497363336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34112693-1	1.19037796603188	0	1.56939517161843	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44053919-2	8.44560605282791	0.730682587826262	0.48425387417309	1.50888330852071	0.131328606076078	0.755639613687366	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36309105551038	3.24942587084132
Merged-chr16-94207428-2	2.96133680066866	0	1.3237903971212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150783008-2	4.21169791125397	0	1.32299879740552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95009492-1	2.86338726906368	0	1.36161845103436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87759271-2	2.63846813081302	0	1.36569795917607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34132129-2	5.65762965330367	0	1.29537581528263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40478165-2	2.88272589542469	0	1.34577954948611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60691803-1	1.63492551073663	0	1.41491705590021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134749454-3	3.63262896159845	0	1.33091762427005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57104103-2	4.36032389638087	-4.13891770041295	1.15900611801871	-3.57109219361873	0.000355495725510447	0.00849368324651031	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88381017423636	0
Merged-chr6-31215222-1	2.01721112990001	0	1.38618127033545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59017652-1	1.26057072885401	0	1.42742710465936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33565145-2	10.324246734883	1.42885257252824	0.721721118366371	1.97978490052013	0.0477277037597135	0.35877309673096	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8541953732024	4.14917097899369
Merged-chr11-29655349-1	2.60509121532129	0	1.40278797972484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141503283-2	6.88100022476841	-0.213610775006089	0.664655470131936	-0.321385717270463	0.747918105464877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11991334080358	2.83995505205827
Merged-chr5-5610532-1	1.39085269067387	0	1.43728197123527	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20898850-1	1.20953748995292	0	1.45615325055882	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44146898-1	2.08345317248992	0	1.450814490009	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63782853-2	2.70106815939557	0	1.36323930018275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124445707-2	3.12840648231396	0	1.31466944677957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148607979-4	6.9130871655879	0.300843691262864	0.677968675010547	0.443742760324706	0.657228576343478	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51523507632669	2.33144057216469
Merged-chr6-142988958-2	3.48270656178114	0	1.33204068621724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80554952-1	2.20837919009254	0	1.36492289506516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149632889-3	4.56190600132834	-4.80636290223076	1.06936796851334	-4.49458282251776	6.97064691953129e-06	0.000380537922810102	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64677792886383	0
Merged-chr11-113444458-1	2.52134153945515	-1.15952003364179	1.50653594180798	-0.769659721659384	0.441501768669578	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	0.469435083901436
Merged-chr5-117377963-1	1.98021496708375	0	1.40465236475445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110371994-2	2.51658589085634	0	1.36155346226048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104434490-2	2.54123046266714	0	1.37466334127564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150755252-2	2.84904550537767	0	1.34764018490841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53931486-2	3.77299651999774	-2.34449372012938	0.893751895527958	-2.62320419331188	0.00871070492718926	0.0996690114116808	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37619500960651	1.07938469868934
Merged-chr8-78940245-1	1.74548218137004	0	1.53394746676409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107044495-1	3.12091906545184	0	1.38831713018003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44771202-1	1.57304438095302	0	1.6654949837471	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99209092-1	3.08154482190316	-1.28261556252351	0.971070343016501	-1.32082662368128	0.186559180310969	0.969300802782906	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11581594771149	1.24302299519605
Merged-chr5-17815499-1	2.02017755328908	0	1.44883243046844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106762681-1	1.34114644474835	0	1.48312776921174	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67868851-1	7.83025888822736	1.0921414108944	0.653007568659973	1.67247894712089	0.0944299159030031	0.593956808605028	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55765112464225	3.94620305121175
Merged-chr14-67920114-1	1.86110668795664	0	1.3568731652319	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97309068-1	1.25047956066251	0	1.66358682266688	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49796498-1	2.05417311343274	0	1.39186485330975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28871962-1	2.78734481828769	0	1.37281307495998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69329537-2	4.49215360067318	-0.90131424661008	0.894746483500947	-1.0073403620246	0.313771239915313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26597096630438	1.84016081186083
Merged-chr7-30436624-1	1.82265892176322	4.23462697837675	2.08493586308277	2.03105863031944	0.0422490474017351	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.52291781457558
Merged-chr7-73552209-1	1.94513924829214	0	1.4255763869261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-32591987-1	2.63918758183489	4.55400023472534	1.48410015873355	3.06852620958646	0.0021511745764554	0.034268808842773	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.62731258735184
Merged-chr15-38666645-1	1.98811228042856	0	1.414622808089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59818023-1	1.89512537633889	0	1.43852020846153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78088114-1	1.68284882233263	0	1.5088095991557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149917266-1	1.70427085682145	0	1.54380038280641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111096615-1	2.41715211763164	0	1.36791722679967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-26065265-1	1.55719171346596	0	1.46703505814777	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148525536-1	3.15363118488809	-1.55147394015057	0.925431225359597	-1.67648756345746	0.0936427302056597	0.590198480711713	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88041546883098	1.15307255889252
Merged-chr4-86579679-1	1.13527559522968	0	1.67895271773082	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-34571346-1	2.79503620116418	-4.33095970080038	1.33593089577641	-3.24190398956478	0.00118734015614582	0.0216726061015376	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74855102519173	0
Merged-chr8-126481780-1	2.05603956215221	0	1.40858215217165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33957007-1	2.06987352779302	0	1.3482636456774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37605077-1	2.39697194880728	0	1.35693342662348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116569374-1	2.29549313830989	4.06004654929125	1.32898938908434	3.05498793492144	0.00225069576068676	0.035473701200636	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.94036587464633
Merged-chr13-60758781-1	3.72395293638672	5.63376743517877	1.18468641928016	4.75549254510909	1.97963165871566e-06	0.000139397640485381	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.70898055566492
Merged-chr1-155093640-1	4.09446968122356	0	1.3815818925543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20584345-1	2.07308317113469	-3.7583175312642	1.57953201971049	-2.37938673250388	0.0173414716020404	0.167657316660295	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88308381033669	0
Merged-chr13-37853684-1	2.26066192461651	0	1.32899435432571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137202299-1	2.35020075365553	3.01086042092645	1.21684207843225	2.47432306483482	0.0133488924229835	0.137545064368604	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.847480051707322	3.07029884533764
Merged-chr10-20925440-1	2.34253320291962	-1.44771741059742	1.25066882019769	-1.15755457177591	0.247045857043715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98032484031809	0.733321818366247
Merged-chr9-87098214-3	5.92640064232952	-2.68345265586921	0.894964265328189	-2.99839084065012	0.0027140936405697	0.0410958414656555	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32700083787255	0.73596151290311
Merged-chr15-38440816-1	1.36113564342972	0	1.67631249095692	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-27179599-2	2.02591634101331	0	1.45609623244459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66232822-1	1.36309401976728	0	1.54537949304394	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123211071-1	1.65812563356529	0	1.37194829261773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-153424790-1	1.69975602518377	0	1.45240065154514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114568687-2	4.47846450238438	0	1.30759346898971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53578466-1	2.15106261236093	0	1.38253663318013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73687689-1	2.05484819763211	0	1.35039479153057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101685104-1	2.37774011117865	0	1.40532270274501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71042879-1	4.29405300193335	-0.285731559137334	0.688377391893721	-0.415079813053257	0.678083476793285	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5989579482436	2.72908043220718
Merged-chr10-88672947-1	3.61975894099404	-1.71475550408072	1.13725561836923	-1.50780130375579	0.131605388387123	0.756965558449515	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47008191998296	1.23021119707292
Merged-chr1-162623447-1	1.31509877635332	-3.4675499175025	1.79267120593286	-1.93429219258201	0.0530772126267402	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9013360423753	0
Merged-chr11-119500533-1	4.795407246019	-1.34839758024729	0.914601392698877	-1.47430081673977	0.140400615379627	0.791051785876623	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90968458162714	1.89255009218154
Merged-chr10-8842421-1	6.29552282568148	-3.68705398546641	1.0306117813318	-3.57753913961846	0.000346844295665082	0.00835110071648136	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.65001565739743	0.469435083901436
Merged-chr17-71103082-1	4.29033977249279	-1.56358141458624	0.993804299489756	-1.57332929168149	0.115642590195182	0.690874081083776	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79901240777188	1.04220233489076
Merged-chr11-70598731-1	1.84362114022969	0	1.43741713556143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149471427-1	1.09403431770631	0	1.69768813028715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-59604196-1	1.72714778141531	0	1.39521776964863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20804149-1	3.39394714918759	-1.42041887444039	0.969612206926004	-1.46493501659142	0.142938648066685	0.800588745741459	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72017061188525	0.963545719069792
Merged-chr15-49506878-1	2.76379156329698	3.3730860423458	1.21622359775911	2.77340946891731	0.00554722726576028	0.0705780983077047	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	3.09780255584617
Merged-chr13-81262526-1	1.93292696872139	0	1.37599969542275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45435210-1	2.43602691680805	-3.15544696447484	1.12828102997725	-2.79668529438847	0.0051629796166116	0.0667947071920613	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20850460392204	0.469435083901436
Merged-chr15-41595194-1	1.66777168912541	0	1.49115019844304	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5768478-2	6.60750904294412	1.25696910217964	0.695789917043124	1.80653537999134	0.0708347529062086	0.47998669879814	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54218287242955	3.16424953000632
Merged-chr7-130009250-1	2.08962920187023	0	1.40489680136118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88476609-2	3.36729465683613	0	1.31713305974145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70944790-1	5.00661085219826	2.44479444485651	0.761255035885519	3.21153139172687	0.00132029544935835	0.023521272201137	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03122919606393	3.15813062208874
Merged-chr1-59487696-1	1.67373928776714	0	1.47514100013971	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127768881-1	4.32613522386086	-0.240862664030201	0.694585486319808	-0.346771806745326	0.728762759329808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85093281324482	2.72065437544902
Merged-chr16-22537366-1	1.54798539693093	0	1.52589999442559	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45216429-1	4.78941721471485	-1.22594017845857	0.838680126923879	-1.46174940731586	0.143809892663447	0.803746257781869	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72942029668194	1.31734301959449
Merged-chr11-11559475-1	3.82558674415717	-0.0364885353209613	1.04560666447303	-0.0348969995704371	0.972161873153547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09230554884267	1.00443616959195
Merged-chr16-91735533-1	1.76152535078364	0	1.53883184087686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52599837-1	2.40842923390928	0	1.44469541028688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51816039-2	2.79154704778484	0	1.32758629432191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50118294-1	2.46656060487877	0	1.37811913055987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81167308-6	11.3483040147909	-0.454284806086032	0.441261092713927	-1.029514755747	0.303237849511447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	4.02840891777272	3.35710291894241
Merged-chr11-100362659-3	4.80151622654064	1.76304847465317	1.17117885049359	1.50536228852675	0.132230959022644	0.759694412545603	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.03956264035389
Merged-chr13-95489126-3	6.1447351396448	-0.430555001727665	1.31725564751202	-0.326857586483595	0.74377560166678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr6-88113235-2	7.28190919782294	1.17477735896963	0.645534324505751	1.81985266216338	0.068781445470779	0.469213105306767	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17705571256074	2.99932271347806
Merged-chr3-88150792-1	5.96461850608039	0	1.31228827451045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10923693-1	1.96121651657048	0	1.40464141725758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129270211-1	2.36160523097095	0	1.35492339092349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32853832-1	4.68560270174759	0.329900761519173	0.738552699997918	0.446685472167528	0.655102172736774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62333932114209	2.99104673515555
Merged-chr2-46444096-3	3.48814174605969	0	1.36108765272335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130803036-4	4.89338832667053	0	1.3179153359543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36240073-2	3.37656034453562	0	1.31375999702034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87863437-2	2.38717044556344	0	1.39600512061595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-93598697-2	7.63848222069128	1.14590669120543	0.490719943325981	2.33515410732801	0.0195353715950757	0.18404821110897	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11587792717781	4.11952333237634
Merged-chr13-92334626-2	5.78456974536972	-0.553322071343439	0.755813308427885	-0.732088288435099	0.464114681625214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36275028490628	2.47111615257247
Merged-chr11-72782741-2	2.39265051123903	0	1.37770543430848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37101815-1	1.38753825435594	3.1420071018713	1.52141274554671	2.0651904692321	0.0389049819537674	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.27911570690487
Merged-chr1-170714547-1	1.70961825193587	0	1.38127725027093	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23879045-1	4.82557335649371	-4.57072259500471	1.0698120199057	-4.27245395448781	1.93333484481324e-05	0.000857094292870868	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43393038960777	0
Merged-chr14-47396366-2	8.4636996774381	1.39195303049952	0.694910906568262	2.00306689295397	0.0451701089701038	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84774728077986	3.1799653900261
Merged-chr10-10477097-2	3.04593003657072	0	1.38491738020339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99181170-1	2.61431519706785	0	1.36807502687892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-6152434-1	2.74045709657359	0	1.3787206839626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115158168-1	1.95897739175864	0	1.39110343225754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4469639-1	5.6420278004912	-0.271508476562478	0.949175105159754	-0.286046773758126	0.774842297259757	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53157202476515	0.825079211029734
Merged-chr8-66497409-2	2.9893663892175	0	1.34527902811123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138766194-1	2.55829874738454	-2.55331442663618	1.01214752098668	-2.52267023698987	0.011646756154112	0.124540816175192	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12604603790195	0.683637474991079
Merged-chr12-103326783-2	3.28805258275548	0	1.38958949891566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66930539-4	3.53869711373508	0	1.34097131594867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151086581-3	3.34337233751709	0	1.3264861792259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40577892-2	5.7639692532485	2.14989104366934	0.796716922164673	2.6984377811734	0.00696657591852539	0.0838375451145415	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59583280127111	3.90351574482649
Merged-chr9-121476276-2	2.8808061823339	0	1.32877826592249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66552234-3	7.47463052550679	0.0508888887975136	0.703410596149329	0.0723459229589289	0.942326619181024	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61657692356733	2.61648329233324
Merged-chr14-27379906-1	8.45006638519325	0.205325225421438	0.570753244312137	0.359744298376951	0.719038361460648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43212155542432	3.58513957598858
Merged-chr19-11851103-2	4.82587983309055	1.33177358083118	0.953323620144218	1.39697952792747	0.162419727445087	0.876857196763606	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32933940507542	3.90350651996808
Merged-chr4-86898932-2	2.89488306045974	0	1.39719099901189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118660105-3	3.78717751411093	1.88998109476265	1.31143284332388	1.4411573603513	0.149540231535881	0.827629034479219	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr6-87553851-3	4.30084893345204	0	1.35885355668514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30710342-4	6.05987743347045	0	1.30935081053221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50634431-2	4.08997772407105	-3.9187123055988	1.11339927434235	-3.51959301205174	0.000432209459794633	0.00986143832393159	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68982896842011	0
Merged-chr6-71555786-2	2.72416680834048	0	1.57207819982221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111422285-1	1.94223617094876	0	1.35257228230809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23195821-1	1.85616952831348	0	1.46199677472719	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105136425-1	3.12979097690777	-2.36637192875207	1.16930920936296	-2.02373496232128	0.0429974292107881	0.33289345464583	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01903847971268	0.306240821987646
Merged-chr17-71012134-2	2.67090857741783	0	1.36287245320953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-174353885-2	4.89281298977815	0.484484204439516	0.881281896316144	0.549749412151451	0.582491260545243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37449858674556	1.87496859647037
Merged-chr12-80001944-1	1.38232399721206	0	1.4884033166193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-65111708-1	1.96079927428935	0	1.45358774125366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52343466-1	4.51410887767093	4.39270393082717	0.959027420229149	4.58037365582058	4.64145939991338e-06	0.000273318739283721	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	3.51460948156002
Merged-chr7-116462279-1	4.38361970749014	0	1.3210085078358	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121264447-2	5.38043754424859	-0.444628894732552	0.5953473911683	-0.746839410617084	0.455160503024189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27856808869691	2.46890512470268
Merged-chr5-20674699-1	1.24771054317147	0	1.58570199508983	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11392678-1	1.80624766653231	0	1.61840915812175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34007092-1	3.78207434363263	0	1.35021473895975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95347689-1	3.21638676064925	0	1.356522828743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9162397-1	1.34033476344916	0	2.30304765251885	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23130785-1	2.8512356953991	1.3379299620884	1.78335447877749	0.750232204539375	0.453114865974602	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.741231840258805	1.82990167917397
Merged-chr2-160850523-1	1.615595955577	0	1.4199872966166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-62541510-1	1.37449428904852	0	1.81078073745622	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-66794455-2	2.29453660538256	0	1.53428464485687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126252855-2	7.38690906737467	0.244507783903622	0.833999119272943	0.293175110444693	0.769388307634208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29905204320523	2.19422870637438
Merged-chr16-4630826-1	2.55792050973759	0	1.37106327460699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71387725-1	2.2557600563039	3.4379759882827	1.28632570653487	2.67271031809197	0.00752411928122687	0.0886532813831683	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	2.92086993437728
Merged-chr13-117287645-1	3.43119676479305	-2.43172982798181	1.42926984574523	-1.70137908892487	0.088871825359767	0.567019947271952	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11290838560194	0
Merged-chr6-3488338-1	1.95548850460338	0	1.39312275213722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124030547-1	1.80073516960057	0	1.47410139751308	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47449101-2	6.61630145817163	-0.928085911383345	0.832064036608634	-1.11540202502452	0.264678182159572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26729004672436	0.793480537552656
Merged-chr1-91035608-1	2.11276500226377	0	1.40315218590474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36173530-1	2.19965956440891	-2.83919238517444	1.27042654297016	-2.23483396256553	0.0254282512757247	0.225336928107337	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57304624560924	0
Merged-chr11-32536927-1	1.66851875590154	0	1.48474788957663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118480909-2	3.95401187382888	0	1.3379338586249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92751490-1	3.11982102767533	-0.108102516027944	1.00797413119772	-0.107247311892312	0.914592782380703	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57252713538714	1.20275690226768
Merged-chr9-116181823-1	3.171846866529	1.42599280626138	1.11417028760262	1.27986971303078	0.200590960987189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.720239450772285	1.1517642783294
Merged-chr7-83399930-1	2.22076192622396	0	1.37136150176275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36016863-1	0.877120516115201	0	1.79446700160848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86206288-1	2.41845540683122	0	1.36907036645396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100434082-2	6.71829748431832	-0.587418804819298	0.708154145402246	-0.829506977588378	0.406817590116543	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8570306412149	2.11916498288763
Merged-chr7-43539877-1	1.89392900793794	0	1.38808585976892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88248807-1	1.79054042306538	0	1.41444740343409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62582758-1	1.60013834419796	0	1.41541697418157	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67443333-1	4.0910605184658	-0.163797992214147	0.843974203461045	-0.194079382453196	0.846113725098634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86161801471666	2.50692356123179
Merged-chr12-105796200-1	2.40636627590731	0	1.40465168552686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30935541-1	1.86568160096899	0	1.41715864283742	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4288794-1	2.41846192734217	0	1.53463575068986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32051781-1	2.95492106966017	-0.762977747456383	1.41255582475792	-0.540139889754191	0.589100563064503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07919603520954	1.428339764855
Merged-chr3-77659413-1	2.54508724594407	-1.97483092974409	1.82747187714589	-1.08063546938317	0.279859298316549	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43245609553659	0.688405034366054
Merged-chr7-97944238-2	3.45817336875475	0	1.31338610518769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122125864-2	2.06908813240257	0	1.40032756989838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57037968-1	2.33890712099184	0	1.33775709924523	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-118310449-1	1.2022596090546	-0.18002377963018	2.43158589596708	-0.0740355419599856	0.940982104457306	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55482115558778	1.56706844884727
Merged-chr7-36713273-1	5.20751233640634	-0.95231366990508	0.924157541243813	-1.03046680615014	0.302790926599563	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56984433307401	0.887107926668329
Merged-chr9-77734653-1	1.91935543105353	0.949903007826323	1.12739200602295	0.84256674054063	0.399470798772161	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.08186277552917
Merged-chr10-54016356-1	1.04877902150371	0	1.69898822561771	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43658743-1	2.65231477521013	2.81649673549361	1.77703385872408	1.58494264004394	0.112979367313178	0.679373307853771	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.86914304741896	2.27508942431803
Merged-chr10-105186817-1	1.43773411097207	2.07373486480929	1.36909811270213	1.51467221053752	0.12985543527642	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.845523456341755
Merged-chr10-40448194-1	1.62130747018391	0	1.41985838559666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156986117-1	3.73168379199687	-1.27987588708833	1.12137467751601	-1.14134545103464	0.253726195090463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62573354843298	0.989878296978726
Merged-chrX-109139851-1	2.03684952883105	0	1.37466698168091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114647491-1	1.51802538173141	0	1.42234546883581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3942406-1	1.7168874106055	0	1.44169924352075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4077761-1	1.85784139629819	0	1.4066436883276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137122805-2	3.5987749273614	2.50030272797524	1.24690486409715	2.00520729364998	0.0449408906733502	0.343378464598912	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr9-118667658-1	1.80842083645994	0	1.40675200737636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55719897-1	2.04769199996614	0	1.60561888901677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-133457001-1	1.29356922371264	0	1.53265442712344	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20821044-1	1.95782252513658	-1.86954463311126	1.17851013175345	-1.58636280057233	0.112657033823358	0.678121456542109	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13004933786641	0.851599296279844
Merged-chr14-21758301-1	5.76695951772402	1.08408497974307	0.847809789493987	1.27868891486863	0.20100662480371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8765104083847	2.68597815110705
Merged-chr4-132619562-1	2.58098305653191	0.377991965864746	1.4348509428557	0.263436399262804	0.792214238529268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.469435083901436
Merged-chr9-110864851-1	1.44389867752431	1.17942125178943	1.50011179724776	0.786222236204861	0.431737301150115	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	1.00443616959195
Merged-chr16-76561853-1	2.71839032753661	0	1.36955817899626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57949513-2	2.30426150077806	0	1.38190084946963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15586876-1	1.6287370532739	2.51246352835884	1.43235682484855	1.75407655744195	0.0794173899394723	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr3-108232317-1	2.1623046986054	0	1.42102859199124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83740220-1	5.37903514920777	1.28897716588568	0.8904908337334	1.44749066139358	0.147759550082204	0.820069267850493	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911917615848565	2.0509200531463
Merged-chr7-102314280-2	5.67436587227692	-0.694101718765958	0.927870904750859	-0.748058501685997	0.454424871399442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81200533599916	1.10669213789164
Merged-chr3-79177778-1	2.95306154901108	0	1.36595687004128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24092922-1	1.60079384695992	0	1.54130615001161	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75701504-1	2.1026574675062	0	1.34463270031904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118455779-1	4.1420478071712	0.619891278141513	0.987525282010101	0.627721932222058	0.530186115183527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11626454030916	1.69334296600841
Merged-chr4-124675286-2	2.81038075294404	0	1.34470712259657	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44607719-2	5.47820511094444	0.209091512838532	0.819104854385053	0.255268311155974	0.798515873380949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46159083012986	1.77338015316878
Merged-chr8-126693832-2	6.98706448300056	0.820744265092241	0.669206203844458	1.22644449554894	0.220031450368741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37076404318115	2.63911979784309
Merged-chr6-128846257-2	4.78058253263833	3.88045402499202	1.20506838543431	3.22011105087076	0.00128140947226239	0.0230420977915405	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.43393032742955
Merged-chr13-110368826-5	10.3516557341276	-1.80032289881244	0.72181048809319	-2.49417669666779	0.0126249679433858	0.132210121030206	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02183029085462	0.735627456805112
Merged-chr7-132305969-2	2.67443355905661	0	1.34828266804652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-69778224-2	2.30002206033574	0	1.38428455393895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-89158163-4	4.24495699599843	0	1.30097395376961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47756325-5	12.0910333560396	-0.301216297584684	0.603697447860285	-0.498952411762383	0.617812909526601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44695979604131	2.21307952544685
Merged-chr1-85995024-1	2.46622844747601	0	1.35896321623387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145126586-1	4.06027264634979	-0.238668083693	0.925578408210148	-0.257858309545626	0.79651626115628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78637643334433	1.40590822918039
Merged-chr14-122079646-2	3.07920988429048	0	1.35826193710258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58491003-3	7.75780716711334	0.660941139545858	0.569666792504193	1.16022409633609	0.24595757875682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59081847378901	3.56069189104354
Merged-chr7-39532128-2	5.30466965079621	-0.286705138973962	0.683449247412441	-0.419497336575373	0.674852700817844	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2982762539493	3.04002873292877
Merged-chr3-144678307-1	1.88877331929508	0	1.36206552954958	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10356292-1	2.71592976852642	0	1.3827944215441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16334501-1	2.03670688384803	0	1.41743991998452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66359116-1	1.7947839589014	0	1.37143764498682	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102736769-1	2.36718540024712	0	1.35938950059336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114934727-1	2.00186405149877	0	1.43085122140263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36254376-1	1.36998182135289	0	1.59588668674519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108034366-1	1.66256411514651	0	1.36472055863932	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102021837-1	3.21051565998841	0	1.3286229915537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16229220-3	8.70849758155179	1.7521106830383	0.715950212421972	2.44725213099822	0.0143950100395637	0.14535233488274	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37340271540269	2.26697506892916
Merged-chr15-97667680-3	4.36961585465146	0	1.30768185638193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22029343-1	2.87758163236856	0	1.36298650296756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-95658999-3	3.40460465520335	0	1.32225686540544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34520865-2	4.28665710111258	0	1.35386037227064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50138667-2	3.15165248058355	-1.57604748833419	0.970267802803534	-1.62434276782172	0.104302674384969	0.641664711011129	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24244820963119	0.666688015277142
Merged-chr12-14459560-1	2.78447395000499	3.28691109030562	1.8216160316723	1.80439293086817	0.0711697304764136	0.481683812295362	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.270877049729
Merged-chr4-102329246-1	1.98934711350655	0	1.43853510203994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77775657-1	2.93523051372422	0	1.34750515957613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117432647-1	5.95102580872847	1.99970142074093	1.27356043103623	1.57016610441789	0.116376472944064	0.694293988514232	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35702408930663	3.70997825068887
Merged-chr18-20605477-1	1.64346057626346	0	1.64000950228193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91606803-1	2.28356185681373	0	1.41602456511992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145318048-1	2.15121576186141	-1.5658305485499	1.32367488121125	-1.18294195257151	0.236832153503889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28251659749223	0.420961122473315
Merged-chr4-86666958-1	1.39980616300644	0	1.53165336456964	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16411766-1	0.810870549514198	0	1.91051882479147	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88332215-1	3.86503158919731	-0.17747859310383	0.932007882297268	-0.190426064494615	0.84897527482768	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40217439211173	1.85545068682378
Merged-chr12-34908172-1	2.41932244443044	-2.99275784133289	1.37184883224928	-2.18155074449855	0.0291427054724907	0.250639540906209	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07082981906568	0
Merged-chr10-26779552-1	3.11910553579323	0	1.35324139353346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-88157-1	1.01529156065681	0	2.28325823650075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91353052-1	1.72535627485005	0	1.47282432257223	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93791235-1	1.44093726543359	0	2.436244961464	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139470379-3	5.21762837686563	-1.92763462180455	0.810285349471115	-2.37895776230281	0.0173616652045505	0.167827718114876	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2574987694357	1.20539659680455
Merged-chr8-90982251-1	2.67522900931759	0.854387312115829	1.0992973217915	0.777212220187576	0.437033573636902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.910402644400882	1.76628008406346
Merged-chr13-55587133-1	1.87343950627762	0	1.53446020403377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125661718-1	2.17901086021296	0	1.3607986188394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53264520-1	1.74474772703807	0	1.55963909031426	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103337929-1	1.78534828223703	0	1.48480233811385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17553240-1	3.06879554611712	1.70518239532146	1.26656322439364	1.34630657394763	0.178203666606282	0.937290469901331	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	1.86333058947232
Merged-chr9-23694680-1	1.3307008532396	0	1.7032165320584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11297656-1	0.979599162518918	0	1.88514669953682	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23626002-2	1.87863426838439	0	1.43481787660847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37581575-2	6.10264911107334	0.0580518868277232	0.784501005443919	0.0739984862031807	0.941011589794843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53836438774741	2.14680093235515
Merged-chr11-115208642-1	6.53397623279688	0.708157713461402	0.829532273224456	0.853683137256056	0.393280579893808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49692629193403	2.77249093293001
Merged-chr7-30394015-1	5.980574357518	1.54302203831628	0.78283312460646	1.97107402563219	0.0487154092363877	0.3640202552271	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39883366024503	3.97481476057421
Merged-chr15-57885972-1	3.40543071158156	0	1.31255674031093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20829057-1	2.87181576035257	-0.527141829214407	1.29796698744095	-0.406128841730953	0.684647934949058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89040310003108	1.88086620139027
Merged-chr8-111177339-1	1.93290331724361	0	1.40424894618411	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61470349-1	2.36113813016623	0	1.37780583594192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13473397-1	1.47682792075976	0	1.59653551170663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60009771-1	1.21689123060094	0	1.49718653824481	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118463227-1	4.02380989304505	-0.237283521460395	1.04457906676028	-0.227157071217519	0.820301607334282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18643203739376	1.0991499147123
Merged-chr6-136964264-1	3.14725711681058	0.995545442041641	1.03096797234396	0.965641483292851	0.334223609940117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47592061423954	2.20458646825563
Merged-chr9-66131111-1	2.18121639405725	0	1.37400731471342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123344161-2	1.92154711644905	0	1.44502600143747	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137702971-2	3.43567597504128	0	1.34115204775366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31130029-1	2.91666579782865	-0.268403305564855	1.02788512239866	-0.261121889709341	0.793998511572928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23421359342366	2.27156148143412
Merged-chr5-5501690-1	1.95057904725407	0	1.43837213984932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89332360-1	2.24597522852704	0	1.35921971086047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-9585080-1	3.02279373366214	0	1.34256752351771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92209925-1	1.92040224238284	0	1.39331541157667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26165090-1	1.69483897203777	0	1.43681152642218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-104418125-1	1.28992092574455	0	1.45155393086533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83167072-1	1.07226582654586	0	1.73983459867778	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52333865-1	1.1316230936228	-0.324921216094229	2.34207704781223	-0.13873207817725	0.889661868484984	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr17-36016554-1	0.537001957842239	0	2.16603476484978	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20699333-1	1.50268661290905	0	1.44559601921828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14823455-2	5.08832303756179	-1.61604604576631	1.15490065509231	-1.39929442297973	0.161724711358705	0.87447769867157	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09358799995118	0.306240821987646
Merged-chr8-92840373-1	4.24744249046273	0.936282594757056	0.874814528841758	1.07026411186458	0.284500443511385	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53127239229531	2.17727924666045
Merged-chr1-134303800-1	2.32692108002352	0	1.38856651856683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67359954-1	1.71139330403063	0	1.5253518200267	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178144925-1	2.52726240018445	0	1.34359751243216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-66794-1	1.02578052140425	0	2.43325353781207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85410841-1	3.32097737364045	-3.25043654495119	1.13455463694276	-2.86494492121598	0.00417081780156064	0.0566977865739093	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08333450148336	0
Merged-chr11-119486063-1	3.1045939195539	-0.0958530179764796	0.933973923088578	-0.102629222943935	0.918257248741256	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46654848592144	1.31734301959449
Merged-chr13-94156130-1	2.12907433988828	0	1.37174824548519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53076258-1	1.28565892996824	0	1.49535045145016	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34617111-1	2.64655674233382	-0.575108000049018	1.10930006406075	-0.51844223099001	0.604149756193518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16770768462247	0.733321818366247
Merged-chr10-7390832-1	1.832680010782	0	1.49125913732989	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12715174-1	1.19499521240932	0	1.91451131508863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34693285-1	1.69781234339608	0	1.38503211694142	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120019440-1	1.50073449394478	0	1.43995831806926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53650882-1	2.40838178808212	0	1.38590877781571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80116484-1	2.9437483595575	0	1.33773099018308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170258557-1	1.7143443730971	0	1.42740606797717	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149047608-1	2.9019277054957	-1.07838828849478	1.0368068962125	-1.04010524277392	0.2982910081755	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30257270482501	0.793480537552656
Merged-chr2-181487786-3	4.43291399449715	0	1.32747248802899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12433896-3	10.1516126624532	0.987415184344032	0.517356705362939	1.90857714630631	0.0563166624150149	0.404892575879807	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39713267272743	4.3502917529497
Merged-chr6-115227704-2	3.10077987859446	0	1.32737744548865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85078085-1	1.58903621956866	0	1.51157247701154	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84891850-1	2.6404647808202	0	1.36354374031479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12465288-3	5.28102818864295	1.05427553817947	0.650325518197508	1.62115049875574	0.104985366020165	0.644287540190995	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4435472037912	3.12426893426501
Merged-chr17-34350574-3	7.44875878975623	0.764699949030019	0.788707525394491	0.969560863068392	0.332265428879338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98580515941371	3.18535014306825
Merged-chr17-8749600-1	1.94461913849297	0	1.34974166954076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85517116-3	6.68222656546687	1.44588418798927	1.00149851405744	1.44372075214716	0.148817541573946	0.824680382606093	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.15868211970568
Merged-chr17-24676360-3	7.02523006970412	0.856040327459815	0.743327476318626	1.15163283308106	0.249471983487456	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17353463915932	2.23100068425159
Merged-chr6-134259736-2	6.25632700550546	0.959004418541491	0.599456992295071	1.59978852672961	0.109645504919766	0.665174696995976	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66394056602519	2.79296600897344
Merged-chr5-117159069-2	15.8402162656112	0.332913244065741	0.453916480656682	0.73342400695413	0.463299861430034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2981036896056	3.48952317923639
Merged-chr19-11557471-2	4.92927735450677	-3.17570601801478	1.02384444032876	-3.10174660614951	0.00192382557821141	0.0315359670075156	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58381909299502	0.733321818366247
Merged-chr7-67524813-1	4.62655153362278	-1.75205298204994	0.883928698087343	-1.98212026132997	0.047465782367635	0.357256279036567	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09399702977574	0.793480537552656
Merged-chr17-64735731-1	1.30310312376227	0	1.64537628429473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93494262-1	3.46997283453444	2.18626100072212	1.01583347986896	2.15218443184619	0.0313828312975373	0.265365229550837	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24238311505414	2.87459915472542
Merged-chr16-93924364-1	1.47087446010512	-2.71304300793203	1.28971306908316	-2.10360201270249	0.0354131782445839	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04823521286308	0.306240821987646
Merged-chr9-106365522-3	3.32275419750962	0	1.33447140549392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116133543-2	5.29215918728976	2.21186329015448	0.87286638368614	2.53402276854072	0.011276140472142	0.121469492299138	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	2.54664965985095
Merged-chr13-30631412-2	2.09641471431059	0	2.09745347545486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26566369-1	2.95827986214555	0	1.35840831776006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127110851-2	2.69333804684656	0	1.33783707631166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47262775-2	2.63493662895757	0	1.34271857369567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21358573-2	1.85959211096185	0	1.51840880692225	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-129756402-1	2.05186314509	0	1.40131167134867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20812248-1	3.7670642639504	-4.35467039476034	1.16508554563045	-3.73764004805669	0.000185755624880177	0.00515430448552867	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74236611839805	0
Merged-chr2-165462437-1	4.28471992723266	0.887883039063272	0.981462217260302	0.904653305495293	0.36564908590978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02130086876397	1.99834080004871
Merged-chr15-87116924-1	2.528449111302	0	1.40044753395405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44438650-1	1.97578345234015	0	1.40240710448495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9072202-2	2.93219133147277	0	1.32849536781618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101938358-3	4.31080059129657	0	1.29914602943383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34622843-3	7.12865186869001	-2.48742774980548	0.903227973511542	-2.75393125850048	0.00588841345663242	0.0737699895968371	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15878815638968	0.733321818366247
Merged-chr5-65880728-1	1.47245960970123	0	1.40613267473088	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117092869-1	1.86592365990924	0	1.36866145896526	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41407599-1	1.57527181813261	0	1.37496624030819	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6281659-1	2.66839835052317	0	1.42990957235632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-61244238-1	1.94245532484826	0	1.43648621846487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55480445-1	2.49162388139051	0	1.37413380280441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-71180274-2	4.64788427928489	0.673887295727758	0.974331500332688	0.691640674141868	0.489163011822301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23000924322365	3.27440275823902
Merged-chr10-104585230-1	1.54969113642293	-2.369113540961	2.41201583832339	-0.982213094673454	0.325994877796006	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43461491553101	0
Merged-chr7-96151515-1	1.40123334490228	0	1.42929148539606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107738041-2	4.22302920636205	-2.17582521743609	1.13541271878278	-1.91632979042959	0.0553231312707794	0.399375313303176	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30550014254496	0
Merged-chr4_GL456216_random-34502-1	0.996521357332801	0	2.43325358413599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31042028-2	3.81029850967677	0	1.31892216089157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123516950-1	1.28693047697789	0	1.6205747455794	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50587287-1	2.92216453659454	0	1.32977729707469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-11657096-1	2.43444967224947	1.0127742552799	1.16623008247309	0.868417193571467	0.38516598576371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.59319944101388	0.773587911294612
Merged-chr4-22346588-1	1.79992812773687	0	1.49547109987103	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121636990-1	2.27297948446935	0	1.38174054660924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17630239-1	1.59385015532473	0	1.39857907908514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25106301-1	3.94297945714636	3.17681586902815	1.03804518434236	3.06038303240219	0.00221054086125125	0.0349711306861816	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23689933602538	4.07122353470795
Merged-chr10-130093015-1	1.74166911431902	0	1.4101700384106	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79949220-1	3.34940015599315	-0.146833287839641	0.698229743668763	-0.210293659316378	0.833438483779377	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90213362591363	2.32785350547649
Merged-chr13-91635748-1	4.8639549309497	-0.0781506946687486	0.756413496138872	-0.103317425016437	0.917711046463103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1161269139313	3.26392576877833
Merged-chr17-27916637-1	4.52385101605605	0.0620120787518993	0.68928629777141	0.0899656339497765	0.928314524185778	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4298413537477	2.42844712608471
Merged-chr7-102384170-1	1.96770847359934	0	1.42798421795237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-25978603-1	2.39181662505643	0	1.45459446513874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44657763-2	2.55266449585228	0	1.39870348393788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16055930-1	5.63289715189862	0.207009714774249	0.782833385834303	0.264436492515746	0.791443595004371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00976215321836	2.76139440711178
Merged-chr18-61475931-1	2.50409729239399	0	1.32355143771243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99130287-1	3.65803504409407	0.0946819972614175	0.744669350946944	0.127146359845503	0.898824559336745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45488462397317	2.33652457236477
Merged-chr15-99265855-1	2.85882662817608	0	1.3673944417029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72294391-1	4.14305718341549	1.40251249236395	0.772858060204198	1.81470901913528	0.0695686382920824	0.473150732497337	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95759276264457	2.7476138100957
Merged-chr10-36892521-1	1.99665628259686	0	1.61531352793031	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145905775-1	1.66376729919191	0	1.40780237916059	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72821090-2	3.06482661711341	0	1.3731998414229	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136440122-1	4.53516976365981	1.5171072365694	0.997583101598013	1.52078281412262	0.128314348557441	0.743270048828518	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17907729735458	1.67800608098903
Merged-chr19-55804073-1	2.54924708210942	5.35531427739737	1.3585545865857	3.9419205752021	8.08317457281089e-05	0.00268123414027868	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.5798125855659
Merged-chr13-97254915-1	2.40499044085942	0	1.38431907856589	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148694096-1	3.09403977448809	-1.32272407446285	0.907455570581677	-1.45761855163331	0.144945713239112	0.808158922979777	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21171773039432	1.77802408088656
Merged-chr5-151173879-1	1.33957492675881	0	1.65795461453403	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5991141-2	5.02626015066515	-0.233099562601013	0.751904455320681	-0.310012210928579	0.756551670539814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.28006436107985	2.51316779593416
Merged-chr9-61943746-1	1.84302774315548	0	1.38286887818101	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124809607-1	4.12591026649215	-0.38876889040357	0.874396308618967	-0.444614057231779	0.656598686979016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50967950529456	1.68884729081939
Merged-chr10-80506390-2	3.57549637125284	0	1.32665159181992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7714297-1	2.77240928952582	0	1.33818979858112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115986027-1	3.7673773232927	-2.38323195370204	0.949242008611176	-2.51066844080038	0.0120502817730901	0.127747844377733	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08750686209352	0.683637474991079
Merged-chr6-100335554-1	2.76413300562421	0	1.35606392102921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5208610-1	1.75444639099504	0	1.45197627528302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15829682-1	2.52158338321623	0	1.35776880010556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76765945-2	7.07689128224089	-0.0790857118320688	0.664659182774048	-0.118986864067677	0.905285762799318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69766515974535	2.57618756717262
Merged-chr6-143150786-1	2.302211593625	0	1.3357143731748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89992619-2	5.25357318786059	1.91689933484367	0.986336192204483	1.9434543211472	0.0519612893948844	0.381266648238735	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993268325742679	2.16448544747254
Merged-chr3-47655981-1	2.35748754459057	2.53236210257128	1.24271977897315	2.03775794464601	0.0415741461153649	0.324576362252645	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08357181072361	2.17442242701374
Merged-chr6-8691038-1	2.00147260580814	0	1.37515743133499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145344347-1	5.34028830037677	2.29728179441712	0.817217020893633	2.81110370401368	0.00493718698524038	0.0645121817111613	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18351401988243	3.36908422580096
Merged-chr14-120572392-2	2.83528665386978	0	1.32913420795892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40140948-1	2.17985169795461	0	1.41029541718989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62679702-3	2.45082541073441	0	1.38761952968669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50396975-1	3.2932268952791	-4.53559740115807	1.11568237138199	-4.06531242000342	4.79681616445808e-05	0.0017589941025964	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26031172500633	0
Merged-chr8-27113267-1	2.20554981415098	0	1.37140463096056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-139126052-1	1.93441746516089	0	1.42239708648334	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93687736-1	2.03963053265737	-3.86572174622435	1.24781380861148	-3.09799564610202	0.00194834291016087	0.0318356456474055	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62661044864042	0
Merged-chr9-71140707-1	2.36294742090822	0	1.34388132153622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32200784-1	2.22614254288161	0	1.36432811605404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97570179-1	3.61899395829291	-4.29255050208822	1.24671193595182	-3.44309730123103	0.000575092362550314	0.0122523839981698	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87401633628518	0
Merged-chr3-78965325-1	2.91561183426794	-3.14888198295117	1.14836687817371	-2.74205225072232	0.00610566283313866	0.0758662566066323	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91712999417601	0
Merged-chr10-25427666-1	1.83424236339366	0	1.3530257172711	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105425029-1	2.7342939761133	0	1.45005152406498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92408856-1	2.34237188206417	-2.5792769165382	2.15146751793781	-1.19884539042934	0.230588069291081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7267349826417	0.469435083901436
Merged-chr11-107147517-1	2.01694178238244	0	1.36676116624534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93418556-4	5.95721041808665	0.964365305363796	0.693370977260335	1.39083598389742	0.164275168611873	0.883153037277782	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14965258053525	2.39887816450513
Merged-chr1-128723689-4	17.7226212965341	1.81562662883887	0.433936900825296	4.18407981756281	2.86323504762213e-05	0.00116792108253381	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22230541636745	5.03819374583991
Merged-chr6-17800377-3	3.7154072753445	0	1.30954678122143	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-45416118-2	3.66248508190981	0	1.3252749087978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32445927-2	3.05727832267612	0	1.35671963692137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84615278-2	2.27999455299626	0	1.35959551692098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40343214-2	3.27031481747069	0	1.31493046084268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152224387-1	1.65889213968867	0	1.60987925546181	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107334689-1	2.0724974882794	0	1.38865554595625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127557572-1	4.21093705187254	3.71835892574091	1.03791993300902	3.58251037241483	0.000340308099801095	0.00824425124380599	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.99170652413272
Merged-chr1-88241740-1	1.68322681715414	0	1.53678526540437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-20362363-1	2.35286220130992	0	1.35245250730441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119431409-2	4.94737613222834	1.34292567969554	0.731186269744539	1.83663962968661	0.0662631128873528	0.456272852975443	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3753580625788	2.21043983090998
Merged-chr3-101553226-2	6.52160513486156	3.95160915901963	0.78438618303643	5.03783626545102	4.70823927750736e-07	4.4653788654281e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.831055460399687	3.99754678527895
Merged-chr2-70702543-1	2.27952601026142	0	1.4073151856135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70437179-2	5.62317528953034	1.0857477487375	0.776292765577626	1.39863180088972	0.161923424959931	0.875117701383812	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27576423563838	2.95294019622591
Merged-chr7-131800727-1	2.20045394968996	0	1.35686204800195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136637210-1	2.42106438760358	0	1.34190196038644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48492711-2	2.54804438468288	0	1.36891966248424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12841064-1	1.93920136645255	0	1.54831867303832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154187750-1	3.28507701933341	0	1.32979494304045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16701975-2	2.33140893430307	0	1.35899005339332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88252103-1	2.55366899662341	0	1.34500100254066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-43954129-1	2.22784571875791	0	1.38405191400274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67290189-2	3.3498287862457	0	1.33552893205772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50364749-2	3.28563002669861	0	1.31369076852296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53648925-2	3.21137007195643	0	1.3397772226772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79928961-3	9.01730296453538	0.278582046621032	0.520878720141574	0.534830922916785	0.592766778004385	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.55117523202183	3.70180116936528
Merged-chr18-61121487-1	3.13393578806151	0	1.33041871958016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55661779-2	2.95891799574649	0	1.35089778310621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32881665-2	3.28872596982106	0	1.33099095810007	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55818930-1	2.3769526030019	0	1.38087943362509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94258931-2	3.39559692289789	0	1.31820326658301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-130229816-1	2.17273825679205	0	1.36004096160871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4889697-2	3.20885994554617	0	1.36550988478865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34175060-1	3.94517236952138	2.84102627316575	0.900347116140033	3.15547883947893	0.00160234888986635	0.0272887908671374	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24742471775159	3.78824446252404
Merged-chr6-72000297-1	2.00673516575615	0	1.38745102362816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63133290-1	1.20026810512403	0	1.52818652498453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43029336-1	3.005830841075	2.3740960309598	1.33837176144739	1.77386889005512	0.0760848397004411	0.506396533235512	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694210007132702	2.99013578927945
Merged-chr3-62497279-1	2.21069756232906	0	1.34734746108572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115897627-1	2.31317383393589	0	1.47509915874438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80781666-1	1.98905491768774	0	1.35869184325475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73655752-1	2.64032213524097	0	1.34984160253005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100148296-1	2.42596405468965	0	1.41266611795005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122259008-1	3.70225741854282	0.339132282569516	1.1699421205114	0.289870991584845	0.771914934645279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02596004284365	1.7337995627857
Merged-chr3-79673210-1	4.81651585443419	-0.504948355967793	0.838317333544524	-0.602335578381518	0.546950782676524	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10001495157344	1.20275690226768
Merged-chr9-64013716-1	3.08354358246505	0	1.36351621922763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93810600-1	3.45686333504999	1.81179753262572	1.00600814829932	1.80097699575158	0.0717065058795951	0.484465218845787	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.836760058890005	1.6861536412647
Merged-chr13-97219659-1	1.75793945499716	0	1.41690769797918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88054880-1	2.08189338306811	0	1.38605880750914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56407530-3	3.26290577830809	0	1.36263028745175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119351236-1	3.59158988687278	1.44026343769543	1.22030121164926	1.18025240321518	0.237899842478033	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58270614120608	3.16739313000904
Merged-chr7-83483208-1	2.68893338330764	-0.0168704805456154	1.15764140590209	-0.0145731488694196	0.988372721076724	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.765888511628843	0.581381506691384
Merged-chr2-59340259-1	1.98944326501578	0	1.38225914609236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75838097-1	2.53523715092356	0	1.36744763413922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184016609-1	3.81095777222575	-0.127871272949835	1.00958608788983	-0.126657126602352	0.899211780482911	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17842115374925	2.52352953733079
Merged-chr3-15266465-1	3.04919823988777	-0.70175228104385	1.11170847252904	-0.63123768360551	0.527885125817944	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72972478834317	1.62559269623071
Merged-chr1-7627857-1	3.4249323844652	3.69074250306896	2.05587804498704	1.79521470744255	0.0726194980837188	0.4890645905162	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.56895075920593
Merged-chr12-28902795-1	2.51047575098275	2.91137754665256	1.28646700013628	2.26307985074173	0.0236307673953449	0.213401896934247	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05508994349271	2.8342600902674
Merged-chr3-108886312-3	3.23886637182173	1.90412275171794	1.28933580102498	1.47682454035964	0.139722676546366	0.788251577449608	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr3-13561130-1	1.84264357138007	0	1.37209255206644	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-131802195-1	2.49083871220796	0	1.32724027017999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64552092-1	1.47818608204199	0	1.4903129597132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67032277-1	1.31367857896875	0	1.49275692440443	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38808447-1	2.9754553933143	0	1.36833381940346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22048266-2	2.54200077237333	0	1.37496629628701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20387029-1	1.32660202562664	0	1.47451526842965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97415943-1	3.21490775475526	0	1.36259534276875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31089433-1	5.15881685315188	-0.863962668753121	0.731472057058371	-1.18112873952775	0.237551584513341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94169038448796	1.87368577136467
Merged-chr3-60611869-1	5.64867036373868	2.94064354555458	0.805493192593966	3.65073668231099	0.000261489218127852	0.00669826516965215	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.756654853512478	3.35370741293215
Merged-chr16-76610924-1	2.22229189339795	0	1.37817339942625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78199521-1	1.38482217182788	0	1.47549239899858	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18176467-1	2.38023724305229	0	1.33596984073851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16048881-1	2.60893916233284	0	1.35258751046248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50115959-1	2.13408121273524	-1.23244238936852	1.31772110973151	-0.935283179624885	0.349642381376314	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	0
Merged-chr8-111545579-2	1.99006253012946	0	1.50693196724965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87596697-1	2.03598840244358	0.4196812184646	1.13641941226567	0.36930134590704	0.711903122462149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48167038804099	1.48316304163271
Merged-chr6-108428584-1	1.15756525956292	0	1.4560999099738	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-100401996-1	2.95287163382405	1.81657408021659	1.44251714164574	1.25930848776195	0.207918928664741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr10-80876207-3	2.52821203624465	0	1.3729034458813	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82991426-4	6.15807860588634	0	1.31691686926683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82746516-1	2.2368817505534	0.993358130383079	1.12495256119872	0.883022239910798	0.377224255467312	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36936861789053	2.38713383244935
Merged-chr5-67794504-1	4.45835513013892	0.662736979580575	0.797116824827713	0.831417627803575	0.405737744165561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61638172390349	1.57215779683075
Merged-chr5-148812274-1	5.93615489829893	-0.652277485407817	0.754827438065795	-0.864141196402775	0.387510330579058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41357861172349	1.86728154592049
Merged-chr4-134586302-1	2.8316986078611	0	1.4755230706093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17774787-1	2.44203557027908	0	1.3459826692393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44276121-1	5.93742129519576	1.40692531865888	0.684506421687311	2.05538658817956	0.0398416798772519	0.315689876713824	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57759117105816	2.31664666660969
Merged-chrX-140490754-1	2.84182328581662	0	1.38015955996841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35737015-2	4.06999402527289	-0.693556505861079	0.749802716114371	-0.92498532074574	0.354973543173503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26232776367455	2.2439391548042
Merged-chr15-34529952-1	3.1545207237163	0	1.4034670322858	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-48886226-2	2.71375843983611	0	1.33091563966944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83610039-1	2.89670864065696	-0.604306633432503	0.775002842960981	-0.779747634374714	0.435539434736762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03669588469047	2.173597744938
Merged-chr5-101786126-1	2.03317767654531	0	1.42129128254763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14960072-1	1.59280878585352	0	1.447787890907	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43750578-4	9.57816486944643	1.21253312475728	0.503765868690509	2.4069378259173	0.0160869083278814	0.158125016786062	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82010471309285	4.12502712294413
Merged-chr3-78948358-2	2.64322979112355	0	1.37862060154548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106819118-1	3.01065673107323	0	1.33113588722193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25091027-2	11.7007745661698	2.13465145830848	0.577423273159485	3.6968573272572	0.000218284936214535	0.0058531175387259	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06423857000558	4.44133085663717
Merged-chr2-22986503-1	2.70631724050994	0	1.39042132211496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31087219-1	2.46829912974212	0	1.32934230053238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94401368-5	7.19387154172028	-1.43369240457698	0.77134529854127	-1.85869079294099	0.0630709792628563	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85429748836942	1.13404870833161
Merged-chr4-85802000-2	3.19544416438829	0	1.36082611941183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45733368-2	2.45011285880238	0.799279556869829	1.01237304536394	0.789510902655945	0.429813460052144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51988219047703	1.77167105195599
Merged-chr8-83772824-2	7.24233656743351	0.56438021056646	0.612401729029793	0.921584939775706	0.356745117029628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00384147694008	2.79207613586922
Merged-chr12-98212621-2	2.20103569655027	0	1.41737096304356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115491432-2	2.64744352094857	0	1.39966699174913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25072386-2	2.62284732973909	0	1.41044750727158	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141287176-1	2.74129336345192	0	1.35126660169825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16260801-1	4.45008655749195	-1.31342045844029	0.899150564526342	-1.46073473148758	0.144088253699741	0.804519821176368	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27190922155833	1.82361065065357
Merged-chr2-166537079-1	1.80680641546435	0	1.62850889688823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-91390421-1	3.19265677936878	2.40404892828582	0.86820230797089	2.7689962422519	0.00562292837440916	0.0712361142989804	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02571624907516	2.501365184284
Merged-chr11-30799685-3	5.13021817820755	-0.690650755091853	0.939531096218654	-0.735101539343962	0.462277656918011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45725407007785	0.73596151290311
Merged-chr4-151920500-2	2.88806214399384	0	1.35215329175748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26536696-1	4.96902207586965	1.14405182865281	0.880273082393125	1.29965558590361	0.193719039116693	0.995185875009389	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7979069631151	2.62148194084923
Merged-chr6-136475366-1	3.99382408550581	-4.60726206192488	1.14955588898891	-4.00786260681698	6.12707455778621e-05	0.00215257964544676	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35739343462439	0
Merged-chr13-85207728-1	2.72287921712215	0	1.33426674046447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125503148-2	8.25920351460126	1.86424619673384	0.598655824597436	3.11405338449257	0.00184536097764756	0.0305068013466173	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03694034370464	4.50372700163779
Merged-chr4-117473665-2	4.55995079439031	-0.248513803737267	0.884082922620384	-0.281097844307051	0.778635354533236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29762071135934	2.53382185020383
Merged-chr18-20717123-2	2.97613345507604	0	1.34231025945765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66295154-2	2.79017370208598	0	1.36120083481189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62782062-2	2.09826001237612	0	1.44920695809012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-65453689-1	2.3111272802007	0	1.36654641831819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137864180-2	2.66843474913268	0	1.44148651166969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124010306-1	6.01845675235551	0.552805665200998	0.821095237668809	0.673254014687117	0.500785702782228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40120466277349	1.42488422888851
Merged-chr10-99380293-1	2.7745045112847	0	1.33538108911072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47459464-2	9.45552396117779	1.62782595658293	0.49481831935894	3.28974472629036	0.00100278312315048	0.0190543372972932	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91280040566028	4.35753167054027
Merged-chr3-66213712-1	3.22074482322468	0.0980976048256413	1.44589193256466	0.0678457377181989	0.945908434182178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr11-97546469-3	4.01768221209182	0	1.317397211119	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27542361-3	4.15012391913294	0	1.33545483102286	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9877328-3	9.79767706171692	0.584519373158099	0.631337899408909	0.92584236382032	0.354527907638165	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35799382024348	3.10807930780775
Merged-chr17-17870421-2	8.14774607186774	-0.459022270586107	0.626671484198788	-0.732476715727661	0.463877649468048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17222350339619	2.4062301241766
Merged-chr7-114894228-3	5.94562325213162	0.394075952627389	0.738138747114065	0.53387788429767	0.593426023987798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87532359730999	2.1439715376394
Merged-chr2-44982623-3	5.55169507328629	0	1.29860485334476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28869325-1	3.29190443580656	0	1.34122148927607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39560115-1	1.88768928302447	-3.32736869661291	1.60939521685266	-2.06746525761393	0.0386903346484297	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62437671554546	0
Merged-chr17-83058014-1	0.830626763636605	0	1.71845488623559	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34004540-1	1.65539178492801	0	1.53046404127874	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120752113-1	1.83852343030836	0	1.46296464599476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98789969-1	2.52085849234427	0	1.35491994290596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4836908-2	8.39326950819276	-0.535248606753061	0.503594988624885	-1.06285530802165	0.287847573156081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.57842297784145	3.09716266770032
Merged-chr15-78592448-1	2.77729127835145	0.266061370262698	0.985687317636939	0.269924716999045	0.78721817131149	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03518952225632	2.07703040623509
Merged-chr1-24766793-1	4.5502235013688	3.26257873808899	0.839398109849576	3.88680734422152	0.000101571302559625	0.00321106837787192	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12034034514658	3.97552083614616
Merged-chr9-107652602-1	5.87596664521816	1.43078907390746	1.06522357878302	1.34318194077349	0.179213067832136	0.941235905044104	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45928144158397	4.30258280742445
Merged-chr16-17292991-1	1.79592600887461	0	1.40473944368034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121598414-1	1.4914625944213	0	1.48999263742266	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55791014-2	6.02116959215622	-0.240464997257067	0.594645560212453	-0.404383742764605	0.685930553175773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19643390861261	2.85412670560938
Merged-chr8-106017310-1	1.74402511306182	0	1.44274639378286	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98799921-1	1.9976486556776	0	1.38671073407183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-66893078-1	1.48972489595678	0	1.41435474526122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191287062-1	2.17259529988137	0	1.35500828830039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24782078-1	1.46870636355252	0	1.54275933220023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11455187-1	1.7796583097216	0	1.37320816023324	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22747798-1	1.12634455709352	0	1.55193414871015	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77443864-1	1.12746022555679	0	1.65511016129183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4278552-1	1.74923188437263	0	1.53262106910025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10594454-1	2.14843350750112	0.653210770049321	1.51289908058416	0.431760967028351	0.665915151401547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29594162797356	2.13454943088463
Merged-chr9-103175244-1	3.82754023731363	2.55824977019908	0.948720523207209	2.69652622413054	0.00700668803400179	0.084149795307826	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.670820021473405	2.68904493538903
Merged-chr16-28971909-1	1.63454463978974	-4.22640212905131	1.22740696689104	-3.44335843209085	0.000574537302366797	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00248515654032	0
Merged-chr9-106322758-2	5.34249161467931	2.07926805013773	0.922445947020435	2.25408118150869	0.0241910613097197	0.217147020662203	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	1.30831180799264
Merged-chr13-111801038-1	4.23907794939272	0.519027064471008	1.05112338889243	0.493783194205115	0.621459303200287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13388733767844	1.85375318208663
Merged-chr4-64497890-2	3.99689883263018	0	1.32892277918257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-107504442-1	2.10441295355247	0	1.38992301791707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68002358-1	2.06196684088453	0	1.45405530604719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-50421282-1	1.48868225271362	0	1.62464098074807	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89126683-1	1.58183860938442	0	1.41090729918561	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139292989-1	5.19037947603847	2.65431604672801	0.866292570351605	3.06399493377935	0.00218402608619924	0.0346738019020348	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04027344951126	3.72948510844482
Merged-chr4-10913809-1	6.61943507946267	0.610424665276066	0.851556090231933	0.716834360388179	0.473476307520037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57686945185579	3.00155511955616
Merged-chr3-103097823-1	1.1485892845378	0	1.49204339337594	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96821662-1	0.987129867506394	0	1.6934935363562	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97422799-1	1.73595340736121	0	1.46033891271216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87329435-1	4.76749026988139	-0.182278445234154	0.937761776257057	-0.194376066341382	0.845881428810287	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9630206971864	1.29915063860089
Merged-chr11-119454889-1	3.67020523634873	-0.734437791880801	1.05720080236186	-0.694700373136319	0.487243094160609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92512219791175	1.6342703608096
Merged-chr6-136969063-1	6.83557151406118	0.253648151045437	0.53656698966162	0.472724107022308	0.636410025319394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11204276759012	3.31899497426285
Merged-chr12-114991119-1	4.45203324143255	1.8424288438725	0.919835402762483	2.00299840421368	0.0451774597624442	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.855026762206016	2.43227213747251
Merged-chr9-96650142-1	1.8334021492218	0	1.40105073780853	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14972623-2	3.19408245274453	-0.321537526448816	1.24996662701709	-0.257236888968892	0.796995908608408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80566020205235	1.26309897836414
Merged-chr3-145023781-1	1.4965671377684	0	1.46410381646953	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6477176-1	3.36262976054367	0	1.46165615553282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37927285-1	6.11292158784605	1.48405938341265	0.701227264907194	2.11637433066591	0.0343129834624767	0.283108108249874	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37637017936925	3.05727294735325
Merged-chr10-90962510-1	3.12334389446858	3.7235754744725	1.41497350564657	2.63155137507047	0.008499601535531	0.0976983222411273	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.88903407179563
Merged-chr13-13523685-1	1.62642508635662	0	1.43808549787464	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27230247-2	4.29057193297338	0	1.31580651950939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106809486-1	1.66484958442059	0	1.39891098031599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117613061-1	1.59056936240033	0	1.5011802146953	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132813703-1	2.40016992828427	0	1.36005304110429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105975847-2	3.13669273372151	0	1.35329878993608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94283441-1	1.36066117501037	0	1.51294074917427	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121278108-1	6.79643263590146	1.4464785244923	0.875479426636909	1.65221303948722	0.0984911291958224	0.613536828258361	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97662863377265	3.45314352603753
Merged-chr13-100198913-1	3.20049111661607	0	1.37322153762128	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38978082-1	1.70268353277053	0	1.41986743517443	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121792988-1	4.12052174831518	2.00697663499905	0.865357674868938	2.31924520147465	0.0203817448366249	0.190022185489241	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.80094935688498	2.83260079823897
Merged-chr13-101734452-1	3.45445292990741	0	1.37386180102111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104373376-1	4.0413490203767	0.197765540357916	0.744802460890075	0.265527506611051	0.790603122888576	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06698685569293	2.67167347213525
Merged-chr6-22452338-1	2.52937820950108	0	1.38947747990481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87668645-1	1.94953531685791	0	1.38897453294569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99960798-1	1.73690005489735	0	1.56297528687931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59113251-1	1.6568859762421	0.802059378154802	1.49108496922144	0.537903201166056	0.590643878294684	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892005523365874	1.73775798795819
Merged-chr11-59527556-1	2.8681333727281	0	1.39346951682148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62397739-1	1.75601570021521	0	1.40974747143147	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116824743-2	4.93649955759941	0	1.31768595434382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42897786-1	2.46236977090969	0	1.35764771421986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75836645-1	1.8400431130142	0	1.4160810377261	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105533504-1	0.943020461294205	0	1.51566539889036	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110978952-1	4.77219902999923	-0.65136482453189	0.928665043769094	-0.701399098525611	0.483053984416627	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87018548481334	2.27156148143412
Merged-chr14-9404410-1	2.66831051907483	1.8957047631779	2.07146747169341	0.915150630691861	0.360112558167057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03182625049018	3.11218960619615
Merged-chr8-108896671-1	1.89714673728694	0	1.4528013470511	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5421660-1	2.16984193654189	0	1.3995929651319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58020134-2	4.6390944871375	2.68968758928983	0.96771981095882	2.77940738510342	0.00544581802570829	0.0695995354406285	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23174997372662	3.12654871298294
Merged-chr1-121453900-1	3.32561647898624	-1.7984894678297	1.12716202233972	-1.5955909019153	0.110580160127511	0.669071402193734	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22499345634151	0.845523456341755
Merged-chr9-78340463-2	6.26781878071219	4.34124752667512	0.811698380495864	5.34835060779975	8.87593960988671e-08	1.11970492229277e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	4.35319894353249
Merged-chr14-8092702-2	2.67165897377948	0	1.33721844112899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5418496-2	3.1992719245406	0	1.35373710566301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52646518-2	4.1355095825088	0	1.36147990386747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73278667-2	3.32406301511614	0	1.34834033631491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54824386-2	3.47013876636569	0	1.3108865837605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79693029-1	5.50196830084922	2.27634697637294	0.974116247394155	2.33683298319103	0.019447870092255	0.183382470281169	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	1.87822650685341
Merged-chrX-61815084-1	2.63491606455506	0	1.37080196933081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120011622-3	9.16318572316409	0.2818463064644	0.496490410610465	0.567677240971992	0.570254148153894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19847121250226	3.52133424668802
Merged-chr17-71531708-3	7.69941258795752	2.18824185964567	0.664726205861399	3.29194462374173	0.00099497201129176	0.0189610501749406	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61041558319047	3.52127498505192
Merged-chr2-4864582-2	2.95971074903198	0	1.3464506466079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-43624138-1	2.99739139341558	0	1.32508366776656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122645753-2	3.32948744346887	0	1.32496031456351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-6152940-2	3.01559835717191	0	1.37887972109361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69037859-1	2.1658688060091	0	1.35038902962636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8256601-1	1.752320637494	0	1.41359970511505	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139611799-2	7.48388537428871	0.601758600436632	0.740694979807901	0.812424299936119	0.416548207449601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88039125223038	2.60391341779232
Merged-chr8-71960645-1	6.04967201065847	0.50588436294145	0.589487257093243	0.858176927243451	0.390794774390529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8439455527087	3.04743810724652
Merged-chr6-31189227-2	3.16833570859453	0	1.31917323708665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60761772-1	3.54415818942251	2.4234165317271	1.22811715562489	1.9732779732191	0.0484639010510961	0.362763124637449	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	1.81050397723341
Merged-chr13-52535753-2	2.50326466816729	0	1.38978557355255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-135797352-2	3.38701916228317	0	1.32534371794427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127300075-2	8.14174670574302	-0.271426656923409	0.548849780885562	-0.494537242021789	0.620926811531387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09961392094472	2.73855547031609
Merged-chr1-172349655-1	5.16193121933586	1.00619910938367	0.733073849583158	1.37257536871056	0.169884393562361	0.905726754549676	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22911755282827	2.67261959439934
Merged-chr12-26071701-3	8.042171696543	0.9466764472557	0.630942279560617	1.50041688110513	0.133506449420243	0.764200459339104	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51625492778876	3.62478025404468
Merged-chr7-143024504-3	3.67534486905017	3.3488042758548	1.18873494168259	2.81711604364447	0.00484570142764803	0.0635582508011016	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr9-106289057-2	5.25099714524241	0.183158588414862	0.777715652280124	0.235508425062391	0.813814140478926	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8142740637407	1.64143129445672
Merged-chr16-70412492-2	7.10919149969657	0.553917083818912	0.564940606296853	0.980487289539692	0.326845640722739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40718358813979	3.89323344637104
Merged-chr13-19430093-2	3.80432609986061	0	1.3376183469911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111966762-3	5.41964504681864	-0.650896067753697	0.710833255885391	-0.915680382655932	0.359834557149151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45489148057751	2.37833055520499
Merged-chr15-74594237-1	2.09043605711359	0	1.40647730279505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160602012-1	2.02470084054369	0	1.39743424075679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3005932-1	2.95412721121694	0	1.34378033839499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108686984-1	3.90908350099791	0.413577574464211	0.82499577046262	0.501308720931134	0.616153868624647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58703561302357	2.96006934525357
Merged-chr5-80953110-1	2.29745787423541	0	1.47321940768227	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-50447420-1	1.96365596755516	0	1.4041560189658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4842772-1	1.03113135476326	0	1.59720282942214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77865982-1	2.04534355187636	-2.31002137877696	1.33845109852938	-1.72589150348122	0.0843669335752693	0.545845707070252	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32716443824524	0
Merged-chr3-123334253-1	2.15322138882614	3.02592086585746	1.67888489437168	1.80233968153601	0.0714919789429368	0.483464230156799	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26501898168246
Merged-chr8-120436471-1	5.36972672692676	0	1.30368057728749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77821514-1	2.22749260564496	0	1.37064880457715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123436956-1	2.18122146446441	0	1.4185436183845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44584517-1	3.72334168169962	-1.37156671932261	0.775182979414	-1.76934576189927	0.0768361909976631	0.510206049886525	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97605507844611	1.8338940823526
Merged-chr2-157259916-1	2.03320481306233	0	1.36723363547554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9039774-2	6.51979296119839	2.5656920961866	1.00178145386878	2.56112956201989	0.0104332439353606	0.114627196496104	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15452458292669	2.71403690839733
Merged-chr1-161654915-1	1.55490401323205	0.217844611746602	2.23172910990033	0.0976124793910723	0.922240014711654	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24871586622803	1.41695929335733
Merged-chr4-32574714-1	2.86788371606348	0	1.35219020183846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-87909298-1	1.31027947240556	-1.41672105828625	1.68327778738325	-0.841644242504161	0.399987116875585	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.850726719819399	0
Merged-chr3-107998285-1	1.09336195790709	0	1.50511316793218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85615736-1	1.90123361978324	0	1.36416875330488	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101155434-1	3.33995521597527	0	1.34227014685187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100508414-1	2.71394857826746	0	1.33980857388478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17511885-1	2.86644039596441	1.80944192051879	1.78970435864096	1.01102839236131	0.312002840883147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.97234876436263	2.7661131762375
Merged-chrX-96196750-1	1.73201897156591	0	1.49395930115333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89634370-1	1.94427341668863	0	1.53373631942012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114258315-1	2.36800217208508	0	1.38007239773122	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146697400-1	1.66163370300917	3.96439596437651	1.578304437198	2.51180689285432	0.0120114795944516	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.80785104250469
Merged-chr18-44761957-1	2.38002494395868	-1.28280289572807	1.40957055248086	-0.910066469159933	0.362787456598474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03494303883816	1.21653520045322
Merged-chr2-29119661-2	2.45240538780086	0	1.3617860273302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66261133-1	2.24396388646774	0	1.44110194071326	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110499177-1	6.59848347691432	1.48929010287395	0.661584657980007	2.25109528298487	0.024379503124125	0.218417402718454	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88143483012494	3.84398133817173
Merged-chr1-59619606-2	2.70783134529561	0	1.34015871496092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-93929932-1	4.23372752854072	1.06484124619335	0.905073146881257	1.1765250685678	0.239385120941776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57598965406405	1.88787614081909
Merged-chr5-103937700-1	1.95614888645417	0	1.36843806655566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31227626-1	1.74053195931507	2.5128544998918	1.41932397195375	1.77045871805629	0.0766507555655365	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr13-63073965-1	5.04840326537426	-0.200201282035152	0.849526229759486	-0.235662272713853	0.813694747397514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73342170800199	2.43049365066179
Merged-chr8-68193588-1	5.23926623764027	1.34364861895991	1.03892363448152	1.29330835719265	0.195904431369512	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	0.958904680953568
Merged-chr5-130852274-2	3.84003775298133	0	1.35397850201978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110523219-1	3.49611922420499	-0.876427632647788	1.31897584613907	-0.664475877411466	0.506385783126356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	0
Merged-chr13-10542912-1	1.63196547923447	0	1.49638531185412	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116377257-1	1.38146783273304	0	1.56623331089592	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22818224-1	0.967725675343008	0	1.68612870904545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88588201-1	3.25091582766835	0	1.34287282874668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47157299-1	2.00206777979967	0	1.49145921289243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59651876-1	1.87716892884048	0	1.44283800712029	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148283577-1	0.605018230756239	0	1.97270351824136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117728878-1	2.45518024978288	1.84065854465382	1.22132144019418	1.50710409567621	0.131783977151025	0.757749147015623	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.15692263537643
Merged-chr1-154004172-1	2.05754689793699	0	1.46614828444911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29998262-1	4.70734213749611	1.8273783056086	0.90432992535268	2.02069870119132	0.0433109643757514	0.334815837938939	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2710394776553	3.32553483911794
Merged-chr17-86435698-1	3.75649389270487	-0.186167960027627	0.806451216602472	-0.230848383876139	0.817432591334932	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84570481888692	1.68598010415578
Merged-chr18-63880603-1	3.45816160179835	-3.30074699656678	1.10835092638269	-2.97807031870257	0.00290069426940272	0.0433353378437106	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98575427941364	0
Merged-chr7-72345638-1	0.500493034145676	0	2.20131707600641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135136690-1	2.98493052628516	0	1.37227477546145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65843253-1	3.86368850176872	-0.0591626441481234	0.782810177024677	-0.0755772547221986	0.93975543280005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55092722184269	2.19779354260537
Merged-chr19-9994658-1	5.34166362380678	0.686800360757183	0.634442235731104	1.08252622867351	0.279018767283365	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74273021307288	3.32835432828296
Merged-chr14-121641475-1	1.269090309972	0	1.5003840962075	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-109552228-1	2.98974090656309	0.93028035236642	1.10228921622107	0.843953055764854	0.398695638675234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.926118884040621	0.926147595614233
Merged-chr17-15065783-4	3.95275386155548	0	1.30555994867963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103340447-2	2.71100371921457	0	1.35887876934333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113017830-1	2.6888308290663	0	1.34119466498678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24386652-1	2.45253395472715	0	1.34720636012335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80018699-1	5.09946819742404	-4.81225904926972	1.06404042486762	-4.52262802878794	6.10765201954608e-06	0.00034112019561475	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62837202397598	0
Merged-chr4-148681726-2	8.68731527003244	1.91931054426159	0.608920270004625	3.15198990542229	0.00162161879345802	0.0275380201864106	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51785178631205	4.26639201760376
Merged-chr8-86900014-1	4.33677819857475	1.55063805639591	0.757744461160212	2.04638652722274	0.0407183565595663	0.320369076633416	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70233242376387	3.12140019351026
Merged-chr2-155811933-2	3.38758047111932	-1.19237174671355	1.31577313752275	-0.906213778583799	0.364822711463429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0
Merged-chr6-97526304-2	4.79016513373045	0.859626166696866	0.761583065175556	1.12873592652524	0.25900924896933	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92638638943394	2.32500372216053
Merged-chr1-88258054-1	3.42440101028032	0	1.40413990200964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120170985-1	2.59838974936991	0	1.39187899452583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139437682-1	1.69396441928917	0	1.45432272209903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33098047-1	2.1760029081905	0	1.384346732472	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43495547-2	3.10132781534067	0	1.31919392434524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35711994-1	3.6619755616518	-2.5974017571707	1.1667029353014	-2.22627515418027	0.0259957566470237	0.229277731658309	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6200927311277	0
Merged-chr11-74469117-1	2.72453781682975	0	1.36685073129304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25291356-2	4.21840729252085	-1.09315431577135	0.806424141125271	-1.35555752863001	0.175239992826074	0.926400175650243	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84897157080161	1.88903407179563
Merged-chr13-37504144-2	7.52405334527401	2.08712530791412	0.666611992450886	3.13094473479323	0.00174244947407143	0.0291654977798851	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7712587481732	3.86784155411463
Merged-chrX-129777519-2	2.38854950294626	0	1.40376505864925	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90515241-2	3.31563960963046	0	1.33789036004353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102370228-1	1.81867752329272	0	1.5092413459302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17808784-3	3.81397624196922	0	1.31992715176144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46858326-3	8.95764613727351	0	1.28753266874519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106628540-1	5.56341467480453	0.106438506758442	0.864501858868813	0.123121200569441	0.90201112337769	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59079065222012	1.26501898168246
Merged-chr8-11575730-2	3.90064262343324	0	1.315065144933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19300375-1	5.24015250466889	1.12949670937395	0.821141931324672	1.3755194641587	0.168970455578934	0.902160584219385	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25253199476414	2.30406722002565
Merged-chr8-39648657-1	2.12259903577558	0	1.41973172731566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-103782460-1	1.71902527078429	1.63746089426524	1.55354786435193	1.05401380404093	0.291876597225264	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499615150807969	1.08186277552917
Merged-chr18-12347531-1	0.721281094622982	0	1.76048830616665	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82795826-1	1.71942666269209	1.93946601147845	1.4925416755446	1.29943842993247	0.193793510377665	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr1-136707586-1	3.10895661461517	0	1.37781969857355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75907635-1	1.44225284118094	0	1.51661098350559	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110986895-1	2.15252852737048	-3.42578158213957	1.20799174035451	-2.83593129629695	0.00456922741182089	0.0606748088707271	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29982251065997	0
Merged-chr2-152781296-1	1.67804509100898	0	1.46711333661356	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54577068-1	1.9244181338268	0	1.39588559999076	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-104504262-1	4.05803082290355	-1.73607303104166	1.01518375559022	-1.71010718156373	0.0872460550352882	0.559089881369853	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52807221361714	0.73596151290311
Merged-chr18-38422549-2	2.76749341485307	0	1.34261963241137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128851308-1	3.00617054254353	-0.975318308466944	1.30754704563644	-0.745914505884733	0.455719061933023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr10-78439780-1	2.28880723874137	0	1.38640655157873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-81493378-1	1.7661062353603	0	1.3600350927879	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34795859-1	3.70602827525579	0.857460801292975	0.859210701651278	0.997963362938869	0.318297124620823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9052823996732	2.52449471409698
Merged-chr12-32989899-1	3.46815575686772	0.568628000491958	0.975790729279853	0.582735604499557	0.560071300890819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47016255141069	1.38233238432098
Merged-chr18-11552194-1	1.41363486800769	1.23775657552148	1.51264768568348	0.818271556051205	0.413202144020668	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr4-46356012-1	1.18484629228041	0	1.63136880358566	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167360259-1	1.78269209512465	0	1.39829340440454	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97523950-2	4.81394869352031	0	1.29966157690888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93523838-2	3.73625788480122	-0.616893566295583	1.06121690203751	-0.581307709207383	0.561033085764917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94140128623158	1.87744667331019
Merged-chr17-35094963-2	6.95050560757288	0.419559067453952	0.657037796275118	0.638561540648832	0.523108207370928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75730531539291	3.05009251732765
Merged-chr15-63960739-1	1.71494521925168	0	1.45855375228054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80157887-1	2.4816898361155	0	1.44441877008837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39006932-2	1.90207211543247	0	1.53608229878018	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110503007-1	2.38914885381958	0	1.38966024767948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55594157-1	2.08290462069383	0	1.55046032280329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39498059-1	3.38308703998491	0.286862756110855	0.939777652402807	0.305245347532375	0.760179297037151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70952498228737	1.93871841517079
Merged-chr11-79519138-1	4.00781485257893	-2.98382312481719	1.10565762513092	-2.69868633562211	0.00696137543293996	0.0837992620767085	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62577956606894	0.469435083901436
Merged-chr18-61113001-1	2.35852665754161	0	1.38535035697485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16193325-1	3.14049199642105	-1.89992590754832	1.25348338253204	-1.51571686870748	0.129590960347366	0.74847541937944	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66402430455544	0.469435083901436
Merged-chr16-23351830-1	1.55552161717847	0	1.5930818883114	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-56943963-1	1.03613923823057	0	1.70664113528532	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-70756060-1	2.85357291210653	0	1.3636084293412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-10105408-1	1.57819919878079	0	1.43322418696181	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56748042-1	2.52381087890174	-1.38642281328984	1.22994544139751	-1.12722301870117	0.259648200511289	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56689792418831	0.609949614787909
Merged-chr7-45107218-1	1.73642701624692	0	1.55780910549499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134071092-1	2.07400749905416	0	1.54043742612646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95653128-1	3.67365017329312	0	1.34111713807464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108295586-1	1.45513084052714	0	1.41829253097491	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5840124-1	2.59728228832704	0	1.39761661592428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63794231-2	2.42772433730624	0	1.36363120142891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25056932-1	4.07756208665261	-2.95723637970854	1.23242650279129	-2.39952351966691	0.0164164251618863	0.160489567225642	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94107960029897	0.423054662900563
Merged-chr11-78114876-1	2.35374060952393	0	1.3799859072297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151690233-1	1.89627493390982	0	1.3985416717139	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-106279615-1	2.61160008507294	3.77570272213591	1.29774721055627	2.90942850150106	0.00362090198148687	0.0508513777954527	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.61972779591675
Merged-chr1-44042359-3	3.86489093205864	0	1.31370404437939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75152566-2	3.68391436548668	1.16797095339346	0.940683474899463	1.24161950811168	0.214376980622704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.803892645765084	1.27663763006505
Merged-chr16-57535000-1	1.44972121660219	0	1.44539128399621	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125542824-1	3.21792083228986	1.18478264608177	0.824454675500285	1.4370500662912	0.150703768046761	0.831677090345715	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62498079389157	2.52597312980084
Merged-chr8-41004325-2	9.74380205385317	0.520617379264431	0.538634786923131	0.966549862548569	0.333769108903523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.44300017301203	3.82306402453052
Merged-chr2-33227477-2	3.2786392871223	0	1.39665899747798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118802846-1	2.47732760368897	0	1.37137990377006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-4227223-1	2.33019436333544	-0.998642812410713	1.36651008745837	-0.730797980619468	0.464902557195163	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.990201747101619	0.984484304269093
Merged-chr19-34843186-1	5.41415311478327	1.19825869400569	0.718399232321423	1.66795653460494	0.0953243555186317	0.598028546056116	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3734374419661	3.24380199352959
Merged-chr16-24685200-1	2.52781658722543	0	1.35061077249935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-33986723-1	1.76216131916903	0	1.4252627721742	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47305263-1	3.16683241754207	2.46110029257892	1.23988526683698	1.98494196068425	0.0471509292058717	0.35555748116228	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr16-72142384-1	3.65467342125857	3.14803565281788	1.26670711565942	2.48521194355104	0.0129474324259422	0.134596490440767	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	2.80122427565032
Merged-chr5-92128760-3	4.78956484007678	-1.2579239383451	0.955406838329285	-1.31663694237821	0.187960349607494	0.974660881513435	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78486125783143	0.581381506691384
Merged-chr6-83495299-1	2.58541633366654	-1.49078098095252	1.32318817432825	-1.12665833165366	0.259886966199679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.713108075655496	0
Merged-chr16-36660436-1	2.13535160911289	0	1.36593544896828	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69663665-2	3.19040457611294	0	1.35683507587106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122555838-3	5.99202191979811	0.372752720054918	0.622331749585887	0.598961438658651	0.549198599453128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69570612478267	2.96945729934465
Merged-chr17-35751729-3	12.4787407967409	2.4485775930659	0.506844936312593	4.83101914932767	1.35835937687834e-06	0.000103453790025049	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59546537374161	4.89947696849815
Merged-chr19-17347427-1	5.61624855141111	0.196548405571468	0.556384620487307	0.353259954236912	0.723893564457444	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22998807601283	3.35228908326008
Merged-chr6-49057918-2	7.07369746860483	-1.61514690202388	0.71377754389211	-2.26281551702615	0.0236470639697805	0.213460566676236	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78379456637116	2.43282905033915
Merged-chr16-3236066-1	2.73507312104819	0	1.39064425052341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40636215-2	7.64682511100111	-0.90128992043613	0.599911008511022	-1.50237269803255	0.133000883244675	0.762575740677947	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52746014480573	2.4851130237326
Merged-chr12-12249185-2	4.39043897551505	-2.64516223364149	1.07097153277967	-2.46987165641655	0.0135161535139835	0.138893940481958	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47066616376008	0.61242769162773
Merged-chr15-86137859-1	5.33641477844002	2.270664799937	0.88027309726704	2.57950039253348	0.0098943346097448	0.110062375580871	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14507436299688	2.86668191370119
Merged-chr1-138328026-1	2.56482145015306	0	1.33763889776038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95741514-1	2.72812287857448	0	1.36433813374636	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136396908-2	2.63383559980076	0	1.33631305573949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143584143-2	3.06434122724064	0	1.35869584251854	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101333913-1	2.19074969784068	0	1.37558851200796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42169952-1	1.7517273913681	0	1.45386593682003	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87006630-1	2.28356717995853	0	1.34683182550209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-63111017-1	1.98614865297826	0	1.50884308687497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121266783-1	1.53392507575066	0	1.41100320953171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88419587-2	2.8934458714919	-0.413014153607555	1.41100110403564	-0.292710014489912	0.769743814550914	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr12-110934852-1	1.67272326463177	0	1.48830808218452	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38602968-2	1.79951516480816	0	1.59934236738464	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5968641-2	4.97074615338257	-1.17642111346501	0.839199429981886	-1.40183736003062	0.160963819297686	0.871517253776335	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03647047580924	1.51789747318134
Merged-chr15-97941499-3	3.12611573799035	0	1.34523878266937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27031306-2	5.31634839926689	-0.14660825923615	0.658734256211461	-0.222560551320543	0.823877541839566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36455767891167	2.0666632008033
Merged-chr16-32978748-2	6.28004245901773	-1.73185013574029	0.709816391617179	-2.43985649837503	0.014693097236382	0.147373005680525	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64207013520791	1.77796484182175
Merged-chr17-26230498-2	6.56457508009705	0.553852192413341	0.690113034554654	0.802552864069224	0.422233221793336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27555886454311	3.17483815307227
Merged-chr7-122196908-2	3.16696156384286	0	1.33740084495712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69854077-4	3.36608938198735	0	1.32376831111208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62369331-3	3.37311056875094	0	1.34547801788616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-87043438-3	5.46975437855825	-0.435072088847106	0.915266545875402	-0.475350148880383	0.634537420260858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23362293380831	0.963545719069792
Merged-chr8-35162393-3	5.96691590932331	-0.733441066719791	0.756508047373078	-0.969508611661984	0.332291485624115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88679098413047	1.05629245276768
Merged-chr15-41639084-2	2.73029226892872	0	1.34735355853145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103110169-2	3.84861077675894	0	1.31484594920427	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67905764-2	7.01150513156588	1.26862149036654	0.684503351883295	1.85334591405016	0.0638327941972923	0.444021766023562	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25402236921701	3.87074934681929
Merged-chr16-50373854-1	2.83116614023801	0	1.35651962190013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10355763-1	1.31521786629329	0	1.42724112095191	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94010453-1	4.71026388974954	0.528374453035489	0.688770010152953	0.767127553823307	0.443005681002771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70504666468991	3.09785647535321
Merged-chr5-21267277-1	1.95697309544855	0	1.37862353880447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91651686-1	2.43747925947088	0	1.39390700833535	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172409167-1	1.60031690566371	0	1.74510333257046	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122174251-1	1.11015389764071	0	1.69617580001788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105006975-1	1.74970634771692	0	1.45461469050376	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5928551-1	2.99628019480122	0	1.40505050017614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80197653-2	2.57217108531381	0	1.34604910694163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111302135-1	2.49101464701243	0	1.4161839104405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73342349-1	2.77170071038955	0.509995306578597	1.37843198984968	0.369982204660102	0.7113957496905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694210007132702	0.905469781553611
Merged-chr5-43892573-1	1.72625186914572	0	1.38735635399308	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139229356-1	1.72579520202475	0	1.49436300411649	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136916348-1	1.95637066374022	0	1.44304041868012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182554141-1	1.99087819265011	0	1.42963556336596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38197421-1	2.00843873319608	0	1.42483302257304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3077226-1	2.01164582576416	0	1.44415196282774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25100395-3	11.3181446275336	1.56942398101887	0.441011797979625	3.55868933259553	0.000372710070867098	0.00877345543619646	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65994062167118	4.3200595222997
Merged-chr18-12661336-1	2.34191153604781	0	1.39480812790882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108224825-1	2.58540517129061	0	1.3611188407993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91925350-1	1.21898171248228	0	1.42903221979629	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-117981251-1	1.88089369142079	0	1.37715667619439	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17632002-1	2.14492483348854	0	1.4024699163149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142360976-1	2.09238874834876	0	1.34545048393688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94945833-1	4.19232042427181	5.08282269549325	1.2478156023474	4.07337645556878	4.63364360041164e-05	0.00171317627138053	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.08385898871549
Merged-chr4-141635305-1	3.34970924851157	1.16743838247642	1.15472531183456	1.01100960593102	0.3120118322399	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52144833047849	1.56357026808963
Merged-chr16-17583233-1	1.73648779501614	0	1.44260338260255	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159910645-1	1.73584143861632	0	1.46087747593123	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45086378-1	2.9757637492211	0	1.34955307402765	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110442439-1	1.25282513744688	0	1.47784359439278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135459760-1	2.91859017183659	0	1.36847252723706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84656383-1	2.08637835786996	0	1.3597735270381	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125292786-1	3.91749097469492	1.14006225646909	0.853405179250923	1.33589798162437	0.181582620769081	0.95039631051473	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13345673154675	2.30670691456252
Merged-chr8-95131459-1	1.42474875160449	0	1.46863568457959	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148115713-1	2.13737096278687	4.01911975633874	1.34378834573054	2.99088749289142	0.0027816795848624	0.0419021747700365	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	2.15931113490288
Merged-chr1-138995225-1	4.48455836971728	0	1.33996492047391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41828795-1	1.62212609420608	0	1.59683435863208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58791918-1	1.67146524853699	0	1.47232886255713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47944864-1	1.8164050301914	0	1.43562927165693	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3508593-1	2.99703902484819	0	1.43112842154078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57704953-1	2.26819457498488	0	1.36597571280106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25285178-1	4.07038861899955	1.30458639780883	0.990773045519559	1.31673585964857	0.187927179106514	0.974660881513435	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.919932168754152	1.44027592657175
Merged-chr6-53958560-1	1.78021281403769	0	1.40279454630416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129333697-2	3.81349874627185	2.51129637913086	1.2899198602056	1.9468623257964	0.051551242391746	0.379046995419165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr16-11697907-1	2.22137204958706	0	1.37073681216084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45096226-1	1.51176529116219	0	1.36058184775864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55835007-1	2.70070589289232	0	1.36608010656178	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-30885340-1	1.38528209269404	1.90304389756043	1.83925500028332	1.03468192135799	0.300817481667713	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.73596151290311
Merged-chr13-60748557-1	1.31141660011179	0	1.62642998827723	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-86537084-1	3.78939137301734	0.643223713431101	1.01655178280356	0.632750563534644	0.526896544745231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41248429543366	2.17577111586528
Merged-chr9-32544897-1	2.02181584981598	0	1.34860869457793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116815501-1	2.80716551823228	0	1.36614875771161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64301491-1	1.98449050865533	0	1.42735399834648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49201960-1	1.88459990815582	0	1.40998804768516	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-84813929-1	1.86676323623747	0	1.33882650144671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81199024-2	2.90343932396795	4.4473223436577	1.38611720383865	3.2084749625367	0.00133440927208681	0.0236887553093682	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.13344196072648
Merged-chr1-88263614-1	3.51567777173225	0	1.38821700759966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62310006-1	1.33157739278414	0	2.42504999114224	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123558675-1	3.17015445290608	-3.78816209242169	1.13939744938251	-3.32470648804301	0.000885116628269723	0.0172963011934549	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41082620834652	0
Merged-chr11-94468387-1	2.13045621597514	0	1.46050309971906	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51082422-1	4.68452613577524	-2.46853278569301	1.16665918188101	-2.11589881949327	0.0343534138656712	0.283298609599464	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1826914997737	0.581381506691384
Merged-chr12-46761552-1	4.30304560431882	1.40376750494921	1.52617377756542	0.919795324480366	0.357679727117749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.902614719432867	2.4885037243069
Merged-chr5-150107716-1	3.59977309634693	0.10021194618742	0.958224448851319	0.104580869656947	0.91670839525341	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62677275497049	1.21171060354126
Merged-chr4-59529469-1	1.52783190011854	0	1.4549414483862	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30027393-1	2.72799054790022	0.134973298207176	1.34233474323953	0.100551147086782	0.919906779045561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89098312575732	2.22017310661124
Merged-chr10-108446298-1	5.2574113125128	2.92671114052713	0.980691570558066	2.98433394187499	0.00284196415904866	0.0426431664608941	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08782272904134	2.67980964805931
Merged-chr8-10026395-2	2.72976337622031	0	1.40931139615145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89270004-1	1.21418784940181	0	1.6194641421522	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23534892-2	3.09524746647198	0.456772730581282	0.838118910235227	0.544997523624761	0.585755220784157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56622082038967	2.96384058082504
Merged-chr2-119296999-1	2.41831661015323	0.34343613371238	1.08343947460794	0.316986912293056	0.751253533039676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993154488678392	1.15307255889252
Merged-chr9-74142074-1	1.67872253794996	0	1.48466624130633	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84645612-1	2.97817472852311	0	1.32594023392575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51636997-1	2.15137680583885	0	1.433436437064	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76699573-1	2.50626024838482	3.33288952910858	1.26116194036398	2.64271337600521	0.00822446251746195	0.095070887611192	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	2.54439169879985
Merged-chr2-27412536-2	2.67543715305636	0	1.40423315973622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32399709-2	2.83162597506382	0	1.39832544536762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26687774-3	3.57796306704237	0	1.35972736115811	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-80073072-3	7.14421605784267	-0.941329119098661	0.610111589135137	-1.54288024660053	0.122859834422299	0.72152410714115	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.108284318251	1.5268023559189
Merged-chr1-33684667-2	3.3388627757719	2.49612023989329	1.24051178777725	2.01216970647722	0.0442020506681376	0.339854947989189	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr15-78330095-1	2.42697142676961	0	1.38818613975652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113544883-1	2.43144883056739	0	1.39589321210633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143962347-1	2.07296446433094	0	1.42279516447702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45241281-1	2.02914855524965	0	1.33665521170541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25045045-3	9.9494091487869	1.49590751148355	0.643952433064068	2.32300933217333	0.0201786511127023	0.188478292683054	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98234431868028	3.57112482656511
Merged-chr15-80563471-1	3.93406321716831	-0.581645062413072	0.918580521589146	-0.633199865164596	0.526603133769095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76587733153765	1.20539659680455
Merged-chr13-77166233-1	5.73319362439293	2.56003411753539	0.732724086382777	3.49385828187177	0.00047609367555388	0.0106035505530824	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.977404663108423	3.1243342386103
Merged-chr19-56817956-1	2.23522313861648	0	1.35083955347041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14846239-1	2.32422384421738	0	1.40725486329367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28460759-2	3.00334496960453	0	1.33918546911583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28479377-1	1.42113399462571	0	1.49368154477833	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91962471-2	4.48146854274857	-2.5603938955864	0.928392912122306	-2.75787746993171	0.00581780006847217	0.073025348304722	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76985194016413	0.892489746801999
Merged-chr2-147178969-1	6.77026021146342	1.75760626895033	0.729225195119957	2.41023799055819	0.0159421174314984	0.156937873708752	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02697942573346	3.63104184463262
Merged-chr18-88798696-1	1.64680446430441	0	1.44298592756723	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-11807629-2	2.86952371291084	-1.32258716320344	1.29008089317058	-1.02519707888469	0.305270206289931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0
Merged-chr7-129766631-1	0.900333805674347	0	1.66315346606909	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60757172-2	3.04033699027503	0	1.34389682283232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145196725-1	3.82712573198834	0.388567252210537	1.05341388434171	0.36886475295829	0.712228536646853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19153092231093	1.69641995825753
Merged-chr1-135789969-1	2.55723859673	0	1.33609995625834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72312329-1	7.48253808540719	-0.548341013181101	0.646107865873548	-0.84868338886377	0.396057491775614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52113195100903	2.73686052530036
Merged-chr10-121693257-1	2.42494513954969	0	1.37158545786016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154939225-4	7.93599438282594	0.453837523277791	0.803293601981604	0.56497091743074	0.572093545604902	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51838107596833	2.51134589925281
Merged-chr9-62374538-3	4.01215227310383	0	1.32940381971398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114348520-3	2.95876018376456	0	1.3988512040053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128570579-1	4.23008901129232	-0.730374176952143	0.771773117585373	-0.946358664625746	0.343965680888437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10447817805711	1.7863683906487
Merged-chr2-166758011-3	3.60322663982994	0	1.38984557274559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7810156-2	2.30313740142728	0	1.39564295890147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32976685-2	6.55602248286673	0.252154048494632	0.635021057608003	0.397079821958102	0.691308599124051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34147045414831	3.49051861592046
Merged-chr10-44470522-2	2.96479843233262	0	1.35715882915318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70107609-2	4.78220002462227	0	1.33748408797936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127526874-2	9.98371577908529	1.06181267854734	0.693573007585435	1.53093137555032	0.125786353870616	0.733811751462059	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14087195004487	2.67167347213525
Merged-chr15-80219952-1	2.9916385954842	0	1.34479900956002	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93118652-1	1.7567849050425	-4.04336519036262	1.34236230745211	-3.01212658305133	0.00259424393902199	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86124078302622	0
Merged-chr12-102420626-1	1.49626383665835	0	1.48416777811571	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16396146-1	1.73522163314338	0	1.42240116178547	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95261326-1	1.86569442791528	0	1.41781697260912	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6279281-1	5.69593354164727	-0.460179719216983	0.837448936891564	-0.549501825060611	0.582661112446375	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03474621301728	2.67164797246412
Merged-chr3-37173431-1	1.31051311607313	0	1.74938666235141	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82240347-1	2.16919741113663	0	1.37750143951918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52112465-1	1.71618046284547	0	1.46980990550544	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27667416-2	2.95156922939854	0	1.35793471128479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69658399-2	4.12375331194499	1.87771531639803	1.00444942501411	1.8693975720795	0.0615675221241014	0.431935111997136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	1.6342703608096
Merged-chr14-63967718-1	2.5524727287122	0	1.35991359255746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98294375-1	1.8713198293747	0	1.36329239560802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68233622-1	3.67707538136422	-1.97097329502833	0.903052524592071	-2.18256772596772	0.0290676586865771	0.250158728372589	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01537856615186	1.04220233489076
Merged-chr4-141657862-1	6.00055718612845	2.21782808214777	0.999753032234589	2.21837594949886	0.026529209566555	0.232837824145769	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64687827449062	4.14448592098483
Merged-chr5-117127275-1	2.87771080241915	-0.970457086676442	1.16319592884955	-0.834302341168152	0.404110632911817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3376652839924	0.469435083901436
Merged-chr15-102506614-1	2.00850120270052	0	1.37157372878162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128780441-1	1.86162122836072	0	1.41426762863759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46961968-1	1.84187237204517	0	1.36565798754157	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25555995-1	2.03877442912161	0	1.45100674024316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82157022-1	1.71113852856529	0	1.44013615799201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31068515-2	4.67621634428611	0.370591645622729	0.685904675505735	0.540296135683114	0.588992822933907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50544928140294	2.91136621420107
Merged-chr15-66101676-1	1.30079190088068	0	1.53067430942358	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69443478-1	2.34525015818246	0	1.43388405318917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35996009-1	3.53413619753923	0	1.34690269830305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8459602-1	1.40151570334304	0	1.67181588843627	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73678167-1	1.54234650321508	0	1.42726862562867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79982247-1	2.16116530266821	0	1.40802783280672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103393274-1	1.55015610684115	0	1.6158394710627	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47460823-1	3.61052477796741	2.79065375872103	0.958577105709108	2.911245993776	0.00359990473757045	0.0506750957645563	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.86914304741896	2.74451593490824
Merged-chr11-116102632-2	2.38795336879257	0	1.3395496629004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68318106-1	2.60608772750587	0	1.34759557893211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32351513-1	1.61441521240144	0	1.49453391449654	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99416950-1	0.893678224410365	0	1.72659675307628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34664985-1	3.69454296472025	2.94464864675808	1.18696495524765	2.48082189262589	0.0131079851510175	0.135788585554596	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.46928333126936
Merged-chr8-88257339-1	1.86855827810031	0	1.55475722341827	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82983343-1	2.65495876022265	-1.48847395673245	1.17492828607836	-1.26686366680356	0.205204042191276	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51367867592756	0.609949614787909
Merged-chr9-118691516-1	1.13434496597374	0	1.52466665206193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58274867-1	3.16809587378672	0.992196233787923	0.801201339378954	1.23838564043966	0.21557310247327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24632745151261	3.40787210367514
Merged-chr5-90743671-1	1.71600316574425	0	1.42205040958179	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75182660-1	2.89338465624801	0	1.32415068694444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76828186-1	2.13744100795174	-1.76315021625858	1.17551808912985	-1.49989203276635	0.133642372115475	0.7645302401087	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83831636271195	0.825079211029734
Merged-chr7-81666744-1	4.23035613514042	0.78749358117927	0.928567987715939	0.848073153066929	0.396397231983931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.839090082839484	1.68598010415578
Merged-chr7-24386029-1	3.27877703380094	-0.082958867416468	0.942000769919796	-0.0880666662549876	0.929823689884594	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73680479194358	1.9272926343824
Merged-chr14-58076311-1	1.33304538136794	0	1.42230064044506	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-131886693-1	2.78379106707278	-0.52735229883222	0.984570123563221	-0.535616799871704	0.592223415565412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03205641394744	1.31495854024319
Merged-chr1-172012199-1	2.29259708351239	2.51080257330291	1.28712617248025	1.95070431087938	0.0510922302704068	0.376599474966884	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr8-35132384-1	3.24502934940906	0.459198752511388	1.15056487396679	0.399107223678934	0.689814199839812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0018156979048	1.11548603074465
Merged-chr15-12092280-1	2.24399852385462	0	1.37303023557651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86486954-1	1.48838131808786	0	1.45611669668896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92699743-1	4.51575664410474	0.306562095657603	0.923183651120629	0.33207054228644	0.739835993057592	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05887366988817	1.67709642602482
Merged-chr4-6386857-1	1.46910947547086	0	1.39157170912785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88263088-1	2.44127607472512	0	1.420358946237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61775839-1	1.80507359684533	0	1.44169986608131	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138506831-1	1.80381064334604	0	1.36398451516572	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42934980-1	1.54095657146857	0	1.53151697344746	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15622535-1	1.39474210500864	0	1.66704941739228	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-26812273-1	1.66229688723018	0	1.47709979693886	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133146177-2	2.93930172881428	0	1.36220826511763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51956043-1	3.23566763526592	0	1.33637024028777	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28525085-1	2.44447451820643	0	1.38164164378019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-147307864-1	1.71162965468066	0	1.42459023021742	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16884889-1	1.81248455131052	0.29705774814746	1.75497622439695	0.169265967263765	0.865587443875635	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	0.563523181795778
Merged-chr3-97294887-3	3.70696192158411	0	1.32538261469701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75132701-4	8.84486545229132	-0.0178222793883203	0.524257586061008	-0.0339952722901491	0.972880920689637	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39939928829809	3.56992588308836
Merged-chr6-72990198-3	8.47367466101811	-1.37853295762518	0.767220047451325	-1.7967895419373	0.0723690372578732	0.487830318614915	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6073508991046	1.20275690226768
Merged-chr10-12956016-2	3.21298150042331	0	1.41298779432864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117081992-2	2.41015760782313	0	1.3314617419742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124959585-2	7.18962075897434	-1.4118772846918	0.645758235904474	-2.18638680266194	0.0287873183228196	0.248105526658266	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.54791245757496	1.5268023559189
Merged-chr5-64506348-1	3.41151790259877	0	1.30497360865784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37837506-1	3.25825486658192	0	1.34805460725028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5800965-1	2.54661753838532	0	1.36959016588547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21712075-2	2.1119856031847	0	1.3538803591346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51077665-2	5.81357752689256	-1.35396408072865	0.732242191255093	-1.84906591958038	0.0644482947373222	0.446773298079917	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1878123562887	1.93390680814056
Merged-chr7-55909091-2	12.1562130568522	1.87852208858084	0.518459412319823	3.62327704723399	0.000290893952631988	0.00729702734306713	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00322719328616	4.57847277355767
Merged-chr3-107706163-2	4.40628378003501	-2.53926406850719	1.07974190933591	-2.35173243397485	0.0186862109373068	0.177855353197565	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86590139140821	0.306240821987646
Merged-chr3-104795807-2	2.11671717536007	0	1.36720903088643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107094235-1	4.37014295059858	-0.386675937412982	1.0684530495249	-0.36190260075997	0.717424816372306	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.872260231715655	0.581381506691384
Merged-chr8-85560839-1	3.44134253799809	-1.5729034130228	1.03827456247402	-1.51492049393453	0.129792539722272	0.749308534383918	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32982754400327	0.733321818366247
Merged-chr3-96764719-1	2.66605522553748	0	1.335301079289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4354553-1	3.51746485938504	-3.09153005820428	1.04474781402905	-2.95911608207329	0.00308522860562334	0.0453253930897173	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15507676482999	0.563523181795778
Merged-chr1-163964207-2	3.50914395641631	0	1.39613910354185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155019469-2	3.41875413304651	0	1.31699656317817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13469477-1	1.87381189275049	0	1.3982040790647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-47013470-2	4.68265431651407	0	1.32061151909772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-92419684-1	3.1496877318883	3.34542751563621	1.05732207172737	3.16405720176701	0.00155586213080229	0.0267199387120648	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.679533914075134	3.75225060332627
Merged-chr2-103661837-1	2.10918244443088	-2.72964972163832	1.35940343441855	-2.00797618464592	0.0446458224583597	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2593660033363	0
Merged-chr18-84442598-1	6.0723362224064	0.305271733713758	0.689508823588253	0.442737965447783	0.657955278206289	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32916856710558	3.03824771725394
Merged-chr11-69516950-1	2.52779874076791	0	1.4076111368907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169271523-1	2.93705875884931	3.22195504149427	1.85215632865179	1.73956970675342	0.081934602359681	0.534181235737375	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.21793092431211
Merged-chr4-101202818-1	1.33868025191196	0	1.57193393869634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31064958-1	5.39542178637115	0.108724152969613	0.596596059852393	0.182240816334779	0.855393742484014	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34166574250909	2.56376965164983
Merged-chr7-132658113-1	1.54243979760167	0	1.5423600063976	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52760339-1	1.29009599013781	0	1.42680230153029	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5206268-1	2.99625354784171	0	1.39205620251243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrY-90738459-1	2.76448987168444	0	1.39175983014086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122063989-1	1.86092290535394	1.89085162929535	1.35332915320143	1.39718532244899	0.162357849290658	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	2.31387409893957
Merged-chr17-24458645-1	2.31358162823219	-0.29936964837548	2.19415542036097	-0.136439581990153	0.89147378433135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02130086876397	1.10459859746439
Merged-chr1-88005196-2	1.9521033381096	0	1.4114186796306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-78036756-1	3.32533117249748	3.32027904061147	1.22047075063358	2.72049046557472	0.00651851516589145	0.0798893049054299	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.761571207890147	2.23242628517872
Merged-chr10-30772459-1	1.32141556455698	0	1.55529893842878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88993228-1	4.28400851063431	1.73104064657016	0.962731119168985	1.79805203353598	0.0721687624309273	0.486855030266555	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20720106195789	2.00353870693411
Merged-chr5-143441976-1	1.81718128585305	0	1.4100522656474	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156306036-1	4.85198388311401	-3.06006245434829	0.982987226770834	-3.11302361923945	0.00185181197131465	0.0305764639705058	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20554256631194	0.469435083901436
Merged-chrX-153666938-1	1.40748261034258	0	1.42098567938449	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-45780624-1	2.71041876504029	4.99473877144838	1.39641224001444	3.57683685972039	0.000347777066189465	0.00835912170062209	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.86445479434711
Merged-chr17-32412080-1	1.98096881963608	0	1.38390664085114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-48930786-1	4.59032314416046	2.47661230014181	1.05966863714621	2.33715730873338	0.0194310060566701	0.183302803779293	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.942856544268044	3.1968315444006
Merged-chr17-25127828-1	4.00479591449678	0.0205643215751302	1.09618906883169	0.0187598309085928	0.985032698470114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58905721309852	1.9635581111928
Merged-chr7-136798802-1	1.35054227251619	0	1.40270063448061	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125089530-1	2.77488973588213	-0.269232329221803	1.11236496420067	-0.242035966509668	0.808752294353513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05289259054797	2.35486793061388
Merged-chr19-34724823-2	4.89251501764706	0.515991001756852	0.858453343925732	0.60107052457529	0.547793014464138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52897962866349	2.17540470129796
Merged-chr10-127569658-3	4.11885912122642	0	1.31794956354538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124757259-1	4.60207999457723	1.35148667497146	0.87476794405363	1.54496593543282	0.122354503201253	0.719674333370536	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71384799426217	3.35639097229334
Merged-chr2-102956984-1	0.909953763019336	0	1.97103132863594	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77880566-1	2.26734836652162	0	1.36329729675717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20045789-1	3.58916183482183	0.348604360101496	0.781917894478481	0.445832436580833	0.655718289417261	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65182740902007	2.49065419848114
Merged-chr12-84848095-1	1.84887089064433	0	1.40473374346437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102392590-2	3.27715682370916	0	1.36135626101342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76747574-1	3.58565991216647	4.2113575333148	1.29492999642959	3.25218934222426	0.00114519706426774	0.0211097453770493	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.64054795287913
Merged-chr18-46378246-1	1.68646625300241	0	1.52828755154895	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-74231233-1	2.08708861735518	0	1.40263115996612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156859502-1	2.8852450388035	-0.00289486576616147	1.19032601215942	-0.00243199403910343	0.998059551417063	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23888134884341	0.825079211029734
Merged-chr3-126830448-1	3.12740383483144	-2.04523480456577	1.0333037272377	-1.97931619779718	0.0477804170283282	0.358981859283261	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59523293379453	0.963545719069792
Merged-chr10-87906492-1	0.887001988492691	0	1.61524859728893	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44339964-1	1.90778090305415	-0.509614820753574	1.28743178137493	-0.395838310135023	0.692224312883199	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80070131437135	1.207189364431
Merged-chr12-114405696-1	2.44745030204862	4.9356837412561	1.34675785133143	3.66486353606669	0.000247470498521636	0.00643758248264125	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	3.71360995174771
Merged-chr6-135088044-1	2.52518595309038	2.51197459548489	1.29208878877136	1.94411917920402	0.0518810809503368	0.380880925264657	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr9-105694922-1	2.43067331637614	4.80257907375303	1.13763209283249	4.22155730662933	2.42620253332615e-05	0.00102814595420012	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	3.89890368343436
Merged-chrX-135753000-1	2.87529686921179	0	1.35183652768895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163589424-1	1.48707626884569	0	1.66243408194777	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86810927-1	2.0605379480987	0	1.35090346749648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-45566702-2	3.11203343638393	0	1.36338607813958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36983589-1	2.73520367639977	-2.33956472634003	1.13304463752132	-2.06484779934012	0.0389374035327965	0.309952926209541	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11499459086938	0.73596151290311
Merged-chr8-14938738-1	2.25930052095729	0	1.40691453848819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-133171499-1	2.96278608833871	-0.8362714582693	0.905208140844825	-0.923844385103312	0.35556734234855	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34194539687327	1.76863173449358
Merged-chr11-90019305-1	4.31847332630016	0.221339035709806	0.82099624038288	0.269598111200341	0.787469453601383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54526194846554	1.78026204928873
Merged-chr11-50206732-1	2.59243052723149	0	1.43172294254424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130477703-1	3.78761384016562	-0.0328636790318645	0.868019340450369	-0.0378605377788164	0.969798876765523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67535379441277	2.56027264827292
Merged-chr8-128302535-1	1.46293642875207	0	1.47297267205428	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38455783-1	1.90010966447659	0	1.51643529909435	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84779209-1	1.56782398738404	0	1.413690561429	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49199708-1	1.86768308250188	0	1.47257765618292	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128188591-1	2.95443447230787	0	1.40436026615787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119138147-1	1.50447544083291	0	1.58787340011868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32563486-1	1.36395534280012	0	1.4335891583774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14468201-1	1.01523065734983	0	1.72508039477928	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26428875-1	4.2637438642919	2.02715133978225	1.04364565755987	1.94237510125985	0.0520917072710289	0.38187881843828	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36775367341239	2.82904660410885
Merged-chr9-31253502-1	2.73552688008122	0	1.38777308066857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5811168-1	2.41831635152826	-0.238479381709244	1.03976453507152	-0.229359026650049	0.818589879335367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11139172742353	1.08186277552917
Merged-chr19-29827762-1	2.35058938567317	0	1.39931214221995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51939267-1	1.54081777378148	0	1.42127312376192	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23965878-1	6.34213360821306	0.741318889737476	0.578253167799189	1.28199710960324	0.199843660165295	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21637452577408	3.95358949276495
Merged-chr6-37390491-2	2.27634206306413	0	1.36483660160908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88283884-3	5.01932423597979	0	1.31286834206945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-33995431-3	3.10203181064701	0	1.3672284960319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24036869-3	6.97394355873671	-2.86245134754142	0.989332991961884	-2.89331435502325	0.00381199563661429	0.0531127221471637	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08598816105872	0.563523181795778
Merged-chr11-52343378-2	2.61949973207639	0	1.37252946937487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137964480-1	5.10016032926569	0.905005193366579	0.591980128693649	1.52877630430551	0.126319908563821	0.735892016137241	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31371600634566	3.04002873292877
Merged-chr7-90134527-1	4.24752144666645	2.67189974763145	1.104188901931	2.41978500504655	0.01552968578062	0.153851250306306	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648566509472229	2.57581642672581
Merged-chr10-13830811-3	9.88431329550592	1.13095125800616	0.473202960887703	2.38999193049122	0.0168487429886144	0.163960976818168	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4458992606837	4.48208527249175
Merged-chr4-139217250-1	4.29216188653313	0.397600908124485	0.825146400635954	0.481854986967219	0.629908964422523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44770307066077	2.34310688897156
Merged-chr3-69670390-2	5.75223968161207	1.26776017684239	0.979304785478719	1.2945511914584	0.195475099027568	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.647150925546179	1.19664257419518
Merged-chr6-122304487-2	9.21215710230315	0.454379518532432	0.587521477638038	0.77338367332397	0.439295349472785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93396727919837	3.00109926763133
Merged-chr4-121007462-1	7.12631626603691	1.1008334393527	0.632440982061587	1.74061054007646	0.0817518688494013	0.533628770535708	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11844430590233	3.41871435521197
Merged-chr9-108068023-1	2.1051870568947	0	1.33488702176071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120078273-2	3.02911785709235	0	1.3345879169439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54192166-2	2.10311899587545	0	1.41085013271421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110271915-3	3.8932396879274	0	1.32874062683622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36122414-1	1.97917147756244	0	1.3863442855235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109238351-2	4.71490569226269	-1.07317377558761	0.911105408760274	-1.17788102811052	0.23884403950332	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30664918575649	0.793480537552656
Merged-chr19-6950898-2	3.51018852765401	0	1.32290874860499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95739493-2	1.70811190435813	0	1.51742173895953	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78635481-1	3.17709852170051	0	1.33372088704696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143922084-2	2.14729670123199	0	1.51662017380665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24797288-1	4.73212710799946	1.5718302451442	0.839123029084121	1.87318210877827	0.0610432420360417	0.429332869883455	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46761773964017	2.69347364329618
Merged-chr16-75617761-2	2.72092276395859	0	1.35813660493348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85879391-3	6.26666671617298	0.595977699731817	0.529292077913452	1.12599021334544	0.260169661809442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29257855727879	3.69741207223285
Merged-chr18-62122115-2	3.33453249431715	0	1.31433702178109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52785255-3	4.01792810533718	0	1.35951222249708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189662089-1	2.82132008291649	0	1.35677694860953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105282881-1	2.4241181195574	-2.53071167514004	1.18182128899045	-2.14136578746339	0.0322445516634376	0.270936552947963	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56056146172089	0
Merged-chr1-132521003-1	5.60487639390718	-1.31632730648095	0.784040748923382	-1.67890164929372	0.0931712130670266	0.587793598095956	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74431954771996	0.845523456341755
Merged-chr16-94503315-2	2.91174921171925	0	1.34244055112794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88613826-1	5.93106834867775	-0.21258880216264	0.649143749820208	-0.327491102273603	0.743296471632398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85060255225741	2.20458646825563
Merged-chr17-35658019-1	4.13737605585424	0.318808137364064	0.856936101549819	0.372032566707694	0.709868602150609	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52998252022471	2.90914733968265
Merged-chr15-93310329-1	3.07451309000775	0	1.36590676274413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133182491-1	4.46994685820886	1.474821418764	1.03952434408681	1.41874639795913	0.155972964965653	0.852582099567366	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32030267887642	2.65627011367592
Merged-chr2-105334563-1	1.12224846801326	0	1.60206539679909	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8116026-1	3.15118488978337	-1.27871002591549	1.12931829364697	-1.13228487761948	0.257514685751611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01198352676731	1.03956264035389
Merged-chr4-124645864-1	1.3236227753999	0	1.41980291148507	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-18327188-1	2.14100797196232	0	1.39675836211163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134081834-1	2.9963180928532	-0.0266858097877894	1.05225158155087	-0.0253606744391473	0.979767278262428	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.936187638705818	0.666688015277142
Merged-chr14-94583472-1	4.23276986922099	2.98623096708237	1.05436939948945	2.8322435842015	0.00462226221378365	0.0612794373345317	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02928942523154	3.24367727501313
Merged-chr9-77732270-2	7.04039128331483	-1.59674688535548	0.719776836246472	-2.2183915971543	0.0265281435632153	0.232837824145769	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3527125905982	1.65326585997348
Merged-chr10-70173403-1	1.85591744119559	0	1.3870134241007	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101298611-1	1.47393033023543	0	1.50525197043611	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83543848-1	6.51891732451341	1.17416339268424	0.764511370443574	1.53583509425501	0.124578830132436	0.728737645137784	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60310435623515	3.06371186908045
Merged-chr2-148719773-1	1.51358282050889	0	1.72507719299706	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99974104-1	2.67403560906398	0	1.33671434344283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-41888567-1	1.52333551720004	0	1.51632845021441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173488793-1	2.95410571358041	1.99254937995128	1.48213152285627	1.34438094678087	0.178825231829508	0.939863563709456	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.73596151290311
Merged-chr13-105039862-1	1.13217542605048	0	2.27591726478809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-119052561-1	1.35568255215826	2.17311187315711	1.52823501663849	1.4219749249936	0.155033530397888	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr2-69778859-1	2.1668561161957	0	1.36516089824527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62069610-1	1.42520273552146	0	1.63703563557201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36540706-3	9.32779581707191	-0.102317486853719	0.617770986627333	-0.165623651917213	0.86845313282318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27377262320309	2.62225931102252
Merged-chr16-17881038-1	1.3796900344255	0	1.44864594305931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84642149-1	4.24364401146493	1.48574230533781	0.946623548435035	1.56951758467667	0.11652738532493	0.694889443460746	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22617956717324	2.35526103100457
Merged-chr14-118816765-1	1.56828805788265	0	1.38850893337871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31019651-1	2.29075965846907	0	1.38085450962927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33561570-1	5.06456716993526	0.100697046559264	0.747295973866291	0.134748546868635	0.892810688333512	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2164168557793	3.26831209299546
Merged-chr19-41987198-2	2.64700586332735	0	1.3424316808809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33945151-1	1.33501315896035	0	1.50790784522256	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-71931150-1	1.98804883200475	-0.976206631722363	1.63245424726785	-0.597999382436714	0.549840345149354	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02130086876397	0.581381506691384
Merged-chr7-123487907-1	1.39742837362116	0	1.5697876204476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29991000-1	3.05006269937356	0	1.3627661549417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28076136-1	1.52314812566325	0	1.42239068117402	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-98056840-1	1.746155422635	0	1.37474674465131	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55817633-1	1.70690211012406	0	1.46421194519982	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-33994394-1	1.72545498834969	0	1.42582297727344	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55341740-1	1.57196068676893	0	1.56443957632109	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125419022-2	2.60818281204316	0	1.39702819194809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134124484-2	1.77930743447369	1.2550650074446	1.50291400969705	0.835087702521044	0.403668330125777	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr13-89890388-1	3.19850181111501	-0.349166525674868	0.86989671844512	-0.401388484714576	0.688134126127654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86355939763335	1.81768618332269
Merged-chr2-51073296-1	1.75746632013044	0	1.48226507886527	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156438892-1	2.37749731849398	0.516509647366708	2.00196817634125	0.258000928022077	0.796406191008414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4744247617403	2.54601773443274
Merged-chr7-100230780-1	1.739349202017	0	1.47667737969489	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40303650-2	1.8526532838254	0	1.4039367641939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5561390-1	1.60494895053631	0	1.37362683987961	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3346762-1	2.50478313355577	0	1.36071115425759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100661443-1	1.70073895228776	0	1.5607203310175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71224712-1	4.07090985961767	-1.01223199272907	1.00887293218658	-1.00332951795545	0.315701898526396	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33278700153554	0.845523456341755
Merged-chr3-109438280-1	2.54386177018382	0.085837883836215	1.13391002441642	0.0757007892935706	0.939657148031853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32939017257802	1.354969417986
Merged-chr8-72584456-1	1.65905991485021	0	1.50595691375536	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92326055-1	2.00045380119181	0	1.36143785818628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47776051-1	2.06704466915966	0	1.37829477654995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47006208-1	2.52939095643699	-1.24663480089675	1.25041861764387	-0.996973960005287	0.318777149745514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11277693878459	1.64290788048512
Merged-chr6-56860387-1	1.32486699584332	0	1.51570871891641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17359489-1	1.8835615076639	0	1.52233435487996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54921164-2	4.56470897718432	0	1.32925853046961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64934051-2	6.48797480298934	-1.46953383404159	0.794417606561041	-1.84982535873427	0.064338724659479	0.446361429196126	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99588770929585	1.56586581096048
Merged-chr12-111912066-2	4.44808333769362	0	1.3237069529686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43887579-1	2.33787619547997	0	1.34236335797632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70323479-1	1.91156028071895	0	1.39089065842121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128805520-1	2.55182110335194	0	1.38021335134486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99132766-1	5.88738754333865	1.42294982898562	0.757471563663641	1.87855214274089	0.0603056709664257	0.425197925655163	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81438151100824	3.3629993673302
Merged-chr8-69328889-2	8.73504526629501	-0.63453184782175	0.538573898899177	-1.17817044071149	0.238728664273104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.7837092618767	3.07750501953412
Merged-chr8-72000589-2	6.91204508622235	0.132587616159616	0.743634891653593	0.178296658276464	0.858490003076816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80164320649334	2.00353870693411
Merged-chr4-142153704-2	3.30519135670651	0	1.41500110608678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-38015405-2	7.37354245783394	-1.0790252243609	0.563370540199457	-1.91530289102246	0.0554538871275833	0.400058762280086	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80228385578809	2.72587442728265
Merged-chr9-40753438-2	4.62032705260714	3.31403718229645	1.0102792655603	3.28031792324125	0.00103690169271903	0.0195830572290225	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708251031414953	2.82152469709249
Merged-chr4-26444008-1	2.48547746144469	0.638494820448019	1.00176746372796	0.637368295105071	0.523884974977736	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03337619474158	1.34574950999398
Merged-chr5-139024071-2	3.81981649898088	0	1.32980181853491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32281469-2	2.78661249593336	0	1.37486401988487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68407061-2	2.08649489300452	0	1.40741154653079	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114750266-3	3.25625858028613	0	1.32903034717566	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96267822-1	2.25308913447801	0	1.34100080381089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45330580-1	3.86179952560146	-1.6003521716213	1.17913245702349	-1.3572284963312	0.174708618912414	0.924413482172316	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69068345283965	0.469435083901436
Merged-chr17-42885475-1	4.27149570529343	1.08882128875868	0.966487680612497	1.12657544488167	0.259922025864682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16203710768369	1.8763281121661
Merged-chr4-40680577-4	3.5396956650864	0	1.34360408245748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21605464-1	1.40136457679904	0	1.56047565240785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17625279-1	2.32830098543993	0	1.35103660192564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-50962775-1	1.1361915421088	0	1.53311306479044	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128841061-1	2.55799318581836	0	1.40423953868054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123335676-1	3.0391262386491	-2.64253713720355	1.18182155532935	-2.23598657960433	0.0253526502651572	0.22490279409295	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26886792421216	0.382164212378408
Merged-chr17-13306057-1	2.08335139392453	0	1.43875077327754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166081787-1	5.04413801122364	4.18655034202132	0.983419185846604	4.25713714179495	2.07061347886926e-05	0.000903246384447199	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	3.21887332954444
Merged-chr12-44273613-1	2.18738219963972	0	1.37778452367046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97540387-1	2.0649971676273	0	1.364620226465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55231393-1	1.60764415879498	0	1.42977646882394	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115647547-1	1.69292665582829	0	1.48641992273563	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40357373-1	1.59425964671369	0	1.56012230557285	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-14812408-1	1.74439424362615	0	1.44072664622851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62873568-1	3.49158339542412	-1.27098136299977	0.854446320499616	-1.48749117704269	0.13688513176387	0.777336005673934	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15467745484639	1.47158896970822
Merged-chr9-45677689-1	1.42687772754795	0	1.44857199338519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7438474-1	2.6542922840928	0	1.3537207368393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47384790-1	3.64667694559839	-1.29692549037944	1.12866076688535	-1.14908352308412	0.250521541882011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54022524769389	1.20724342340814
Merged-chr18-62171637-1	1.44882980504718	0	1.78780611048774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45088473-1	1.85740746521491	0	1.45020477897196	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78855114-1	1.02199325980458	2.54822476543269	2.43612851939212	1.04601409373449	0.295554525422062	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.92839347452618
Merged-chr10-95780464-1	2.24345444824949	0	1.35812900916044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107685452-1	1.76748917914413	0	1.45900915354611	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34742850-1	2.29938244300646	0	1.34379220030213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101828279-1	2.37019563358945	0	1.34781330148486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87017094-1	1.88299257123479	0	1.44615990499705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143616745-1	3.85695024445575	-3.79168148902295	1.10249394402271	-3.43918577474275	0.000583466691922608	0.0124031276676561	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34567228871614	0
Merged-chr19-47697301-1	2.63251472484315	-0.166371188475087	1.05829888701178	-0.157206239670963	0.875082310902368	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07048957073865	2.22017310661124
Merged-chr18-36508594-1	1.38954108822959	0	1.71666367568183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-66051406-1	1.09133661352178	0	2.01833426870898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-31035494-1	4.5318752319842	2.19922593776127	0.95249218412797	2.30891756846773	0.0209481558979424	0.194249779382283	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.796855916231748	2.47035004228861
Merged-chr3-138752216-1	1.88695089353757	-1.05179868550196	1.17180610036656	-0.897587651381005	0.369405424842763	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69123845589449	0.843323834477631
Merged-chr15-36505677-1	2.97763721043382	0	1.33724267665732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-34664221-1	1.11443216292156	0	1.60125230741235	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47212333-1	1.75349937954739	0	1.37932536505085	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21106329-2	1.96418824834843	0	1.46921732259941	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-8734980-1	1.09502890022346	0	1.44114484196317	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16463432-1	2.56637990034184	0	1.34790629687514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36997287-1	2.83496356907906	0	1.34941664661294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21094412-1	2.06425260776593	0	1.41609768682035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91191527-1	2.01652440334541	0	1.35188600289688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77784595-1	1.11087988631959	0	1.63787229626669	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-36882653-1	1.70489757920408	0	1.4951935726451	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-81536335-1	1.85692228589684	0	1.45998866267183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91133517-1	2.51416861215697	0	1.34957222336659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155153027-1	1.84629474316436	0	1.40985916197421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-53485872-1	2.77637731111569	2.45626159682386	1.40264870507207	1.75115949413553	0.0799184405334255	0.524701136852931	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.986577844696341
Merged-chr11-70803363-1	4.57668888045939	-0.219850575958769	0.7574864125175	-0.290236989503347	0.771634939957783	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78586229360009	2.26276386882201
Merged-chr7-75753641-1	1.77868420673615	0	1.36670807931023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64764632-1	2.00566675949159	0	1.36621509567308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52935474-1	1.36318437734738	0	1.53021256423931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34796498-1	2.56643263138518	-1.2222076606746	1.0657017691401	-1.14685711900505	0.251440677632003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63674639607325	1.354969417986
Merged-chr2-34954533-1	1.49660245698661	0	1.70401552521635	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75676029-1	1.68066396279035	0	1.45740394635911	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90546404-1	3.78623755133562	-1.66098576649785	1.05580092582148	-1.57319976320867	0.115672570142519	0.69094017656468	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01951324144601	1.20539659680455
Merged-chr16-87405192-1	2.33833661569409	0	1.40143642010562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108599924-1	2.51003858026986	0	1.36820510729547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34067155-1	3.65825668906094	1.71543298150343	1.1100160031704	1.54541283783644	0.122246437026035	0.719344049878731	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3750902935775	2.66752446303997
Merged-chr16-4914297-1	1.67363814372565	0	1.46940481651593	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67945776-2	1.87454686755586	0	1.52074495480697	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76429622-1	2.36187045291984	0	1.38236045853166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129517914-1	4.32567115295268	2.08866381640668	0.749985762147475	2.78493795725681	0.00535379660309522	0.0686247926296313	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78578824039257	3.230157798079
Merged-chr10-122008427-1	2.67887532360956	0	1.38095152189488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77602732-1	2.28384691108702	0	1.32661312245425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24825903-1	2.26928285542787	0	1.40091039714671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14634211-1	4.4843443794622	-2.92242852270917	1.08956242937579	-2.68220383148071	0.00731388812649613	0.0868653823180691	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59436468491288	0.469435083901436
Merged-chr19-25607446-1	1.22806946417461	0	1.53991132465543	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78238228-1	5.04302990989128	0	1.30345585706086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-11720705-1	1.73447283794847	0	1.67919880490903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31731088-1	2.07217480819159	0	1.41220429468527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66108207-2	4.57088439090269	-1.13017447964141	0.856408526825771	-1.31966747672438	0.186946063257589	0.97092492843987	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04056139501969	1.86728154592049
Merged-chr3-122372158-1	5.18939467045818	1.60633602982659	1.00651851235152	1.59593292136646	0.110503770400358	0.6687501167109	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62116925804468	2.45651939465293
Merged-chr3-69117412-2	2.6958453693876	0	1.3295723681067	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-96411051-1	1.66356492419649	-1.5835264568623	1.50504061724268	-1.05214865214961	0.292731353524777	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	0
Merged-chr11-77100289-1	1.37107332040344	0	1.43754416819352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88702453-1	1.01735767479275	0	1.57272538876848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-48421668-1	2.37042492458339	-1.30440482261701	1.30368886886905	-1.0005491753171	0.317044812140981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.782001200233288	0
Merged-chr9-71126457-1	3.8708102205592	0.865849908227897	0.669841740915551	1.29261862219043	0.196142995660264	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93517874068222	3.04001297099366
Merged-chr8-120821517-2	3.53456455324162	0	1.31379232328693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98554571-1	0.76154881870216	0	2.43325241487595	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65188763-1	2.28141132473014	0	1.35959271370416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139640407-1	2.75946999272743	-0.131127573339269	1.12035163660729	-0.117041444002668	0.906827211589559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67589547225915	1.49953561829606
Merged-chr7-82517695-1	2.63214875199376	3.73134845157082	1.411786600027	2.64299749799258	0.00821756425256339	0.09500795358245	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.621365931241243	2.98534683639965
Merged-chr15-76552880-1	2.27888481101658	0	1.34900752393098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67041411-1	2.73248388659808	0	1.3583477159441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110941738-2	3.26158606071219	0	1.37636160852413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-151851353-2	2.96955812762303	0	1.31968581554721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85849299-2	3.82748596441086	0	1.33072972356848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150316724-2	3.10068858837588	0	1.33005324180171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71155608-2	2.92827834597914	0	1.37671493100492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103982418-4	4.09276280937737	0	1.31418179046211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10355758-1	2.47978827186587	0	1.34162177897973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30364846-1	3.00690931396221	0	1.37204267954376	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135639973-1	2.83229937227292	0	1.34159980271602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65830579-1	3.73157282709581	-2.62136221101432	1.24998360379928	-2.09711727661609	0.0359831949717478	0.29304061049649	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70447247679437	0.420961122473315
Merged-chr9-32520933-1	1.77117521703672	0	1.40221779778234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45534980-1	1.63946604988101	0	1.50320015438929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16220391-2	2.7081409725919	0	1.3613223762887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19029468-1	3.08610793286344	0	1.34896910388616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64749502-2	2.80042291958605	0	1.36324887898236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138209608-2	4.992826154267	1.32776873722124	0.775225214750444	1.71275225825655	0.0867581266196322	0.556795967598359	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93354926418147	2.79805567306807
Merged-chr2-58919914-1	2.50293232158851	0	1.39988077946212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78710178-2	3.23307517259002	0	1.34661723974346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10432337-1	2.29342732450435	0	1.37704662698269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13651916-2	2.82251413731114	0	1.34269362521109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-29693921-2	2.29051255616042	-1.11033391755511	1.44787993781777	-0.766868777274858	0.443159539063719	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	0
Merged-chr12-17641423-1	6.40239706367111	-1.4835106316305	0.654510967640011	-2.26659399914968	0.0234150390134651	0.211981038982251	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.483465590565	1.43116362910629
Merged-chr5-135984875-1	3.10095572678796	-0.963251585655754	1.00664252102612	-0.956895387921687	0.338620059337704	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08877751000364	1.97271257483112
Merged-chr5-135768122-1	2.77661517804484	-1.70723206957297	1.00870153531994	-1.69250468031802	0.0905497884853688	0.575366246437662	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72711315000555	1.11779166918352
Merged-chr16-57634380-2	7.14931122137141	0.0399953680465027	0.57529363448102	0.0695216592872317	0.944574392744013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80349780753774	2.44199095680198
Merged-chrX-73999440-3	3.9481385179865	0	1.31501948609993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35074075-2	5.02896235628824	0.619246704559753	0.836990952151214	0.739848743846251	0.459391778458113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81966305661705	2.60903826052448
Merged-chr4-125099638-2	3.56735840462265	0	1.3258271019084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51262575-3	7.99834324784417	0.0228213214516113	0.774018930173857	0.0294841903239824	0.976478427754401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6818711227114	1.52696130946871
Merged-chr4-133451771-4	8.45752612270589	1.41866836079155	0.575925463769779	2.46328466101414	0.0137670565421705	0.140874111619899	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30593084887033	3.37834876224864
Merged-chr3-18613543-1	1.99083683458107	0	1.42476312011129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78370487-1	2.0888122918944	0	1.43957412302742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115564744-1	1.86338820780596	0	1.36354189641953	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133469283-1	5.43563351591004	1.11924379520018	0.704115528178273	1.58957408324164	0.111930842771746	0.675102602115927	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64856230912108	2.8441881967244
Merged-chr5-64625008-3	7.35929734072302	-0.362729313161054	0.589727084095062	-0.615079963162389	0.53850191375002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99685875992355	2.77281609072416
Merged-chr13-119613291-2	3.4087083276726	0	1.49649510035951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131983121-3	3.57248633867995	0	1.32913996116465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35808421-3	8.17238768800311	0.307608050790752	0.583596484682335	0.527090307883177	0.598130876959366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06621291815199	2.71802922847114
Merged-chr16-58017004-3	5.45989259341353	-0.986923590422269	0.631242424734353	-1.56346207376286	0.117943949618753	0.701352746545364	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78544362699043	2.81761847333937
Merged-chr19-24990155-2	4.24327418836743	3.14919776781684	0.952012939089371	3.3079358888012	0.000939863229171559	0.0181651294213087	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	2.80585648675534
Merged-chr11-60703309-2	3.11380464658436	0	1.3419822393919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65522801-1	1.33602372224277	0	1.63661405955581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46484269-1	2.55420714184787	0	1.40199953365121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122906758-1	2.48456087425534	0	1.41262044744501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46743721-1	3.87075730200626	1.42352577892144	1.05460163290217	1.34982322661878	0.177072692647097	0.933069282615694	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43563229610567	2.37152543765538
Merged-chr2-130781195-2	4.73327589883298	-0.938799255824711	0.711536842333723	-1.31939655119699	0.187036574155116	0.971317807735853	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.5369215249945	2.37232581226066
Merged-chr19-57571950-1	2.39151357039231	2.38943007819538	1.27351014390511	1.87625523803713	0.0606202403315187	0.42697379125018	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.825079211029734
Merged-chr13-45444172-1	1.98796412390044	0	1.37769810580225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85840529-2	3.33848645171599	0	1.34225579395902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111036382-1	1.21238248331756	0	1.50332807470237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-69125479-1	1.41924752960403	0	1.44629853486831	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93588277-1	1.93017201548195	0	1.4378074801985	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-74631509-1	2.961225021771	3.58557863733193	1.06844403841461	3.35588810308897	0.000791105700706661	0.0158187249444239	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	3.41815827989418
Merged-chr5-64338593-1	6.43289132845634	4.53361441872192	0.939448252569754	4.82582665550842	1.39423738414608e-06	0.000105571632448544	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641446327055861	4.20548984313901
Merged-chr8-94528340-1	3.57274041914814	0	1.32896707093588	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79390570-1	4.68854104908171	-0.404250561290994	0.785189553342566	-0.514844548771812	0.606661652241773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.829938423039	2.0438339302262
Merged-chr8-72330512-1	4.00695053590274	1.41459822384532	0.967842662386207	1.46159936818412	0.143851027640339	0.803769923230916	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57190509549183	2.63732062367281
Merged-chr17-24244040-1	4.03781184768454	-0.669551460326196	0.912316020210872	-0.733902995774903	0.463007861128539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66970970299185	1.83149254898828
Merged-chr11-84073043-1	1.20798488160413	0	1.50495825035215	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95777395-3	5.56267934292489	-1.38929686161655	0.855801910970489	-1.62338602404039	0.104506910458119	0.642497748687199	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85628654255666	1.57612722179308
Merged-chr11-84613245-1	2.08381412291092	0	1.39902202289749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89601597-1	2.07062188675366	0	1.39067700821434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-31910622-1	1.74092274090867	0	1.38504113505813	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5735222-1	1.52619333648749	0	1.46744935128896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36152137-1	2.83899060208217	0	1.38171901257695	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-112133371-2	3.8308083837189	2.52468701529416	1.17163288974288	2.15484477893772	0.031173982815849	0.264146146406181	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.789939949474495	1.84883647187319
Merged-chr17-10727893-1	0.862630056954431	0	1.56795743181895	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35054022-1	3.43514103128428	3.27846000817782	1.05187288524695	3.11678345754499	0.00182835816077149	0.0302853973064066	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656065931143922	3.10828732516377
Merged-chr2-117994729-1	4.4945325861585	0.0883759619381875	1.07385829509445	0.0822976014078419	0.934410061751349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84547953134777	2.69461614433468
Merged-chr4-85443517-1	2.78386200457455	-0.164305307919387	2.04394389060743	-0.0803864081956562	0.935929936608611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39953925222134	1.44597835587314
Merged-chr15-50784272-1	2.01660651762914	0	1.38970969961029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25594105-1	1.96983204340256	0	1.42337455384052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51615345-1	1.96751081204996	0	1.42159775701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102925121-1	4.1898012884273	-0.320726874184217	0.936847841494877	-0.342346814475711	0.732089908727228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31998790008545	0.735627456805112
Merged-chr3-9714186-1	1.83067017461275	0	1.44070013007926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55333758-1	2.86330294274973	0	1.37051724648938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118052459-1	2.50265308053873	-1.05122644865105	0.901607281083509	-1.16594715981856	0.243635810034448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10906404166669	1.5122114716189
Merged-chr11-77795345-1	0.912636206118291	0	1.71207674265301	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105963255-1	5.03315412083589	1.68023091728306	0.78405043208685	2.14301382732602	0.0321119880851168	0.27009782126529	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71083142982544	3.07749816846053
Merged-chr14-60520422-1	3.20480058158499	-1.80181138033707	1.22251009387851	-1.47386217043058	0.140518705013645	0.791637561670955	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85697937210311	0.900948542443349
Merged-chr13-23702377-1	4.30493107622703	0.897144213558045	0.90415333833901	0.992247858318102	0.321076631795959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51826210317021	1.60978507060531
Merged-chr11-116409204-1	3.18017128870125	0	1.36043164644868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55795918-1	2.16952809061271	0	1.39655565432257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25692477-1	1.88622415752083	0	1.38305008452832	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-66131410-1	2.24340071943306	0	1.40750389413048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115288386-3	3.38400982483939	0	1.34933341230339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84617105-1	1.34932741476448	0	1.44661463079117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75761273-1	2.29847518883436	0	1.33872627832498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38393757-1	2.42711300419807	0	1.3414845090767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105804075-1	0.531280409485518	0	2.43325030127757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-70092885-1	1.3374047596342	0	1.53527529010148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122828283-1	1.53295276210968	0	1.44034870105723	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63897363-1	1.88412189893089	0	1.45840237623847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53419786-1	1.88164572879674	0	1.38298320921852	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100583038-2	2.75635613979632	0	1.36703854996464	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141578550-1	1.72976380194055	0	1.54122891953854	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45751604-1	1.75402450614066	-1.40009442208113	1.5145401309544	-0.924435340778226	0.355259701687631	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	0
Merged-chr8-33977608-1	2.23508491298106	-2.14197169975017	1.33149005071505	-1.60870274516875	0.107681355263712	0.656088190308861	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11839576119226	0
Merged-chr2-11490125-1	1.94317334951671	0	1.46168993872842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106495820-1	5.40758553738311	-1.61746108567444	0.869691551968768	-1.85981004646177	0.062912405485581	0.439358132826844	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49779324850185	1.07982873328226
Merged-chr14-51939059-1	2.99624832273589	-0.558504867040919	1.38295205841325	-0.40384976734604	0.686323197143533	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55820771407297	1.52696130946871
Merged-chr4-54794044-2	3.91161413236139	0.118758458705634	0.897976918777198	0.132251126083898	0.894785663456172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35499764628285	2.4360226934973
Merged-chr5-137510702-1	2.17340102213981	0	1.36073255027768	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90045789-1	1.9634800301448	0	1.40327632675939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51737151-1	1.28529412786889	0	1.54260587864282	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140078903-1	2.88716528569688	0	1.3265125823619	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35997832-1	2.19618369085994	0	1.45934599050561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137880562-1	2.70761542221351	-1.20958212315605	1.16284599441687	-1.04019115941712	0.298251097969988	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59289792406593	1.58492111464609
Merged-chr1-39505936-1	1.30656189303006	0	1.49105596575113	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98608301-1	2.17874375786661	0	1.40092731594288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83685498-2	5.96929862336941	-3.5962340052364	0.961548942136861	-3.740042599646	0.000183989070166535	0.00511614884217122	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.75166711092659	0.688405034366054
Merged-chr1-75467756-3	3.08500165570331	0	1.34822860141743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166651869-3	3.83239925452172	0	1.33309542660335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36811608-2	2.78388230974887	0	1.3362297609954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8877955-2	5.78042829378128	0.751857270458365	0.876173896882427	0.85811420898705	0.390829402103528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38910001436826	3.58086425897587
Merged-chr2-115780785-1	4.34010476706276	-0.755951431311702	1.02136023166193	-0.74014183035268	0.459213939227653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64412326386906	1.14490468848716
Merged-chr5-21514960-2	2.40933034215776	0	1.36746856642935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54755556-1	5.31872829607228	0.631902756862843	0.741067857413435	0.852692166501981	0.39383003610045	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93231779278278	2.12279016980941
Merged-chr5-89860416-3	5.62745405350939	-0.9619374009958	0.804849613928617	-1.19517657006805	0.232018050680288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12413185516936	1.11779166918352
Merged-chr5-143033105-3	2.80448938170351	0	1.38448157709603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83288776-1	1.58739971177624	0	1.39097304304287	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191609740-1	3.13933851654123	0	1.42154209597396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81439527-3	3.46739316743691	0	1.33057916203235	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41314891-3	8.34741327560648	0.709700777054853	0.636937213263718	1.11423977477825	0.265176336083795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74497448957508	3.27086235209841
Merged-chr10-44600384-2	3.39165990502914	0	1.34261351846414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24871445-2	7.11587721109789	0.842664418802987	0.628274074257651	1.34123697495978	0.179843525075154	0.943788547186075	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98262373296885	3.78846936301897
Merged-chr11-116146854-2	5.72882819612515	0.0270489232892884	0.868976343036114	0.0311273413897348	0.975167984954699	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57118904325759	2.12752229043697
Merged-chr2-119106788-2	3.27954100874605	2.35790619890874	1.26880107836068	1.85837341969729	0.0631160041943131	0.44030942778708	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr4-21679213-1	1.2584004845529	0	1.4429738516285	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83994382-1	2.90308702330888	2.45191691711597	1.30904584965164	1.87305656082899	0.0610605749698367	0.429343022614379	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr12-24471157-2	3.59351909850702	-2.33247634904321	1.25690849507362	-1.85572486635679	0.0634927845715372	0.442317533814979	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.729467998682602	0
Merged-chr2-30196842-2	3.24155629157394	0	1.3322660778663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-46701706-1	1.86884740252743	0	1.35798471736705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69034093-2	2.65903274380324	0	1.35830117295109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60584639-2	6.22479126621242	-0.687073568684835	0.624121021123159	-1.10086593053441	0.270955011867353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30368401098183	2.31260716574699
Merged-chr13-77005819-1	4.74700040347487	0.0574630605528574	0.722228276297434	0.0795635707417145	0.936584369664115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15732690852275	2.45761277317717
Merged-chr19-11824167-1	3.81513841731185	0.330207039383596	0.951321698592851	0.347103445524287	0.72851360508879	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45089190868439	1.88903407179563
Merged-chr5-21676141-2	2.98453723251088	0	1.32746220093562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68823402-2	3.07999041166724	0	1.37487304798844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57305800-3	3.46575739530758	0	1.35789840377778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93990483-1	2.78577883900184	0	1.39596343504985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-34035001-1	1.94061349366182	0	1.43947570627322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70783419-2	3.490923554456	0	1.32458641556646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76051396-1	2.93962883713916	0	1.32892310736735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-22384077-2	3.47769220306102	0	1.36094566702219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115441617-2	5.63227998781265	-0.31757441960882	0.740136085186428	-0.429075714540831	0.667868125107504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10368957901943	2.51665517716335
Merged-chr11-31675621-3	9.1422675378147	-0.011253296597626	0.502517224386029	-0.0223938524920717	0.982133784124266	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.51051590400239	3.26687776948885
Merged-chr11-78896950-1	1.55599116207314	0	1.43471540397253	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-18696407-1	3.13243385419782	-0.944499212558842	1.25612405768169	-0.751915550683757	0.452101845764115	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14661142738816	0.729295484888209
Merged-chr13-59798549-1	2.03271883537381	0	1.37309251680331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92205457-1	1.12789756326211	0	1.53949187690662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104676887-1	5.36468102023156	1.60121152675369	0.737319811079897	2.17166486332235	0.0298809506406449	0.255944501319122	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68093999687891	2.75127545182166
Merged-chr15-81094121-2	3.2929211207775	-2.02190316427163	1.22222118537629	-1.65428581050911	0.0980694546593137	0.611609714083557	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0853949393914	0
Merged-chr15-62383017-1	2.92974769858939	0	1.34699350206324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38145671-1	3.37574149204491	0	1.35438572641392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91330244-1	3.17228276671288	-2.81098181613005	1.13019835707348	-2.48715793872571	0.0128768218123598	0.134031347268312	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63492318784029	0.609949614787909
Merged-chr6-145129656-1	3.07833620720353	3.37313958566669	1.13505199820323	2.9717930024407	0.00296066221413689	0.0439998710586739	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.96353301543917
Merged-chr11-8625496-1	1.06161086013372	0	1.56704488500793	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-60905404-1	2.53031113342447	4.15666303345554	1.1978182014781	3.4701952502694	0.000520080151923236	0.0113170688003915	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	2.73718963476356
Merged-chr11-21033057-1	3.21152072168408	0	1.34233381761324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70135895-1	2.1767954683403	0	1.37944623090022	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123984209-1	2.98787852013479	-1.45860638467755	1.30271051334896	-1.11967038703619	0.262854248718733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21166867123066	0.735627456805112
Merged-chr14-73472470-1	1.56749405909415	0	1.64561719882655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80671932-2	2.76531173957943	0	1.36965125083383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156424393-1	2.74512579465782	3.0018630484813	1.22832414559806	2.44386879411192	0.0145307099329111	0.146305665836057	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	2.08636273705548
Merged-chr14-121358570-1	1.52535543214808	0	1.61093152877164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76275097-1	1.36738497908641	-3.59036722178513	1.57196890249541	-2.28399379662386	0.0223718955213198	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12974580917744	0
Merged-chr11-31550887-1	3.36421654235053	-1.02643911191843	1.37404011343596	-0.747022668320567	0.455049877699777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr16-91076402-1	1.89368270689835	0	1.38187257095995	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15530422-1	1.93156382609496	0	1.42803831385561	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-91957335-1	1.51618239841162	2.51543248894331	1.44543493180473	1.74025992702599	0.0818133871346475	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr3-89796924-1	3.4329075961677	0	1.32589761251108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126952911-1	2.35401121352178	-2.28893153582476	1.19166764996513	-1.92078012346122	0.0547594333485183	0.395962148012867	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07066436898402	0
Merged-chr2-132017823-1	2.2615727992624	0	1.37623455618198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9433041-1	2.11831238569514	0	1.3883294758096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129980864-1	4.16083858072947	3.1946589572764	1.22445908557166	2.60903691672549	0.00907974463948783	0.102989931125147	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	3.64434011795774
Merged-chr12-80146664-1	2.63813262892134	0	1.36061830351874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127587393-1	1.84915206356331	0	1.50017744619297	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48642980-1	1.70436213893917	0	1.45069831973722	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56947660-2	3.36598663051331	0	1.338771930866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123322323-1	1.88986537937281	0	1.38999933298342	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3347322-1	3.01659187647807	0	1.36258114207932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116390877-1	1.26085374239064	0	1.79706512483759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33918866-1	0.86518600599345	0	1.52569425619426	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109041052-1	1.24243571522139	0	1.69019041596525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113491109-1	2.93639128981765	0	1.35268939586132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34256449-1	4.06445238227106	2.65998859680585	1.14453380763462	2.32408040641735	0.0201211849748164	0.188076103998206	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	1.84614572455902
Merged-chr1-152934142-1	2.52201751720841	0	1.35061258229804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-24333166-2	1.78528536601463	0	1.3941988952055	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9629395-1	3.05123755301506	0	1.34369571117298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78383622-2	2.87053586657138	0	1.42222509899974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165976609-1	2.90356904836235	0.659433731065591	1.13894253840157	0.578987709064815	0.562597466522279	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.866220529060937	1.58756080918295
Merged-chr19-9052097-1	1.57437362565696	0	1.5319843534501	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52913002-1	1.99313120034801	0	1.3620741532153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99097524-1	2.80920003063561	0	1.31552438179281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23728679-1	4.95613817554661	0.955381332787728	0.696968386524279	1.37076709827849	0.170447570517385	0.907895903409603	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30214282950202	3.34479755881966
Merged-chr6-125436881-2	2.28611064963432	0	1.39434243175013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95705417-1	3.78812602455896	-0.119626112270911	1.05608113379898	-0.113273600334652	0.909813646393483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50059546329279	1.31470332505763
Merged-chr10-94317928-2	2.59650705008623	0	1.33635863553684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140112080-1	2.23355330189221	0	1.42017105473098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20078618-2	2.5899781895864	0	1.47320553824408	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97098814-1	3.2406214921018	0	1.32767580670389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17973598-2	3.26457109067465	0	1.33152885142948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167650296-1	1.2166784953362	0	1.49984806468374	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122110112-1	2.50486521341481	2.33877360703748	1.17490737116444	1.99060254828391	0.0465245998867366	0.351887523869558	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	1.62581156516825
Merged-chr8-27177799-1	1.70191181569736	0	1.51978508866066	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-19161355-1	4.58949824885667	1.95376850828782	0.807101079961706	2.4207234469077	0.0154896563691035	0.153524508584171	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81737247320113	3.56106726520025
Merged-chr15-34045601-1	7.19546705904178	1.08649058686558	0.76496757097171	1.42030934132993	0.155517642828132	0.850913161537899	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22884060023493	2.94563982580623
Merged-chr15-59248622-1	1.62193596683548	0	1.43028486857113	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34257439-1	8.02003506954368	0.745116248468249	0.578715580045502	1.28753445416082	0.197908068624601	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88272073097774	3.63953956491074
Merged-chr4-103265337-1	3.54367105345117	-1.03531593704836	0.797012004797026	-1.29899666606906	0.19394507332431	0.995945997743269	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83627830053901	1.34805514843284
Merged-chr17-36847099-1	3.63083005068739	2.43029812526797	0.826877656459033	2.93912661236406	0.00329138587764693	0.0475627823000258	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52856413299132	3.86235218844904
Merged-chr11-31899238-1	1.94474042546695	0	1.4402990207839	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65426572-1	1.54963299434331	0	1.43425915034422	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67813725-1	3.23736524018319	4.22293333748105	1.20975054052978	3.49074722101939	0.000481671746264111	0.0106913457647332	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.7414873742332
Merged-chr6-70837518-1	1.80439605327897	0	1.43060842413277	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74879485-1	4.90789308602324	0.542371383971833	0.710222962729331	0.763663542907065	0.445067771782243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29665031834825	3.80358933025737
Merged-chr7-111969729-1	4.66347047494733	-0.639878690786508	0.965842676697218	-0.662508197478526	0.507645582983583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11275704779079	0.905469781553611
Merged-chr10-12875644-1	2.92116460830915	-0.942364985441268	0.928756723792858	-1.01465212719305	0.310271681788551	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4392209698696	1.40264952818025
Merged-chr15-38002397-1	1.38290605261425	0	1.66813917170752	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136126405-1	2.48985595882833	2.84997389199492	1.80200475822271	1.58155736214914	0.113750654169415	0.682754684243095	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	2.66149830655093
Merged-chr11-119416183-1	3.39628848537263	0.578965090960459	0.964834266579059	0.600066883002873	0.548461662270398	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80101908454368	2.10663323369202
Merged-chr18-61215859-1	3.75040430176813	0.542394758410627	0.724411249369381	0.748738729392726	0.454014695537231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04249940338292	3.25999104303911
Merged-chr11-115691231-1	2.885005793631	0	1.32092786473305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58663203-1	2.9742777261108	0	1.34539658589242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40899782-1	1.63162411580277	0	1.37175070933003	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58663507-1	1.90413735696568	0	1.3744289269624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79595415-1	2.19159085118172	0	1.39231199799836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64257177-4	6.16750738257423	-0.591735948046251	0.6583654414298	-0.898795578882683	0.368761555444129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1395292954191	2.96413833290342
Merged-chr13-58484872-3	3.68742082083114	0	1.33603558072056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37002258-2	2.18611106888788	0	1.35441149743104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121934643-1	6.68490399038391	0.598816430428588	0.578014143869313	1.03598923448485	0.300207164948197	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86755057578126	3.33612437467064
Merged-chr15-80706870-2	2.89603610332374	0	1.34221782024156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-38561361-1	2.24967223858485	0	1.40660235902661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106020058-1	2.67818727205256	0	1.36901862153001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12153542-1	2.10512465096397	0	1.41482986317467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149336079-2	3.50638095373152	0	1.31947334866528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104644156-2	3.3822355240294	0	1.33811633310625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60691090-1	1.8860246783547	0	1.43538780858852	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20950037-2	1.24635157523138	0	1.85239678076652	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59256124-2	2.17826051302106	0	1.42820849802453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80548902-3	3.93795582485854	0	1.32464579979796	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-174312323-1	2.37148773685478	0	1.37834485371723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-127675249-1	3.03617191171481	0	1.33342523365171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-47317835-2	2.22402176611818	0	1.42318020898718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34662015-1	1.79814977901442	0	1.3959177556243	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115230741-1	2.61952872039975	0	1.34893722568767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40731866-1	2.64985185457685	0.565296377827139	0.903513734258456	0.62566439932548	0.531535088801469	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44190810783983	1.45063110846411
Merged-chr12-32693139-2	3.28617464377203	0	1.34740808160013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118701820-2	5.35001674629212	0.965818825555031	0.782952678782074	1.23355964125114	0.217367039702919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15605457404889	2.78453933845187
Merged-chr9-52095904-2	2.14079291622626	0	1.35689515449452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128746728-1	6.21417317949235	1.91544308968114	0.785033234306644	2.43995159182388	0.0146892301441833	0.14736218307996	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89340459473882	2.67081115113502
Merged-chr9-66878291-1	2.10365221150326	0	1.41438066355705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118200543-2	1.80790285491374	0	1.43241212125038	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145047879-1	3.73616176816569	1.36316468517741	0.862051818588968	1.58130248760298	0.113808891105615	0.682916051256887	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12579677204964	2.13938900109644
Merged-chr11-115143826-2	2.55307230797208	0	1.32999644243865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54680259-2	4.95430138578064	0	1.30973838462074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142859720-2	3.25204911567554	0	1.32904666401692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16059505-1	6.8768937924273	1.2545333275912	0.810024797016127	1.54875916417929	0.121439625445784	0.716079567260438	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5136807612306	2.98895193515168
Merged-chr5-63358479-1	2.5899011209899	3.17295572843952	1.87384454042766	1.69328653470654	0.090400939920615	0.574699856022231	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	2.78809390502394
Merged-chr8-39573195-1	4.06522823315533	-0.627872358918109	0.792950763079998	-0.791817585847717	0.428467046760705	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87455884035424	1.02292369297257
Merged-chr5-147541899-1	4.18878500576189	0.437659161325438	0.943414003241919	0.463909969346946	0.642712249921501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9767624311859	1.74280392117882
Merged-chr1-91088195-1	1.2538386535913	0	1.8218002860432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121389213-1	2.30832874851826	3.21044957482651	1.24817055730803	2.57212410277533	0.0101076652156065	0.111855267594699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.87744667331019
Merged-chr15-50402780-1	3.10743446177952	0	1.3510969520098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-122421208-1	2.29596980201102	0	1.35597970184091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-180351067-1	2.2841595712373	-2.1028699146207	1.26726502742184	-1.65937658588973	0.097039931363856	0.606520454796991	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7159352172194	0.735627456805112
Merged-chr9-44569796-3	4.34382229416881	-1.09548051480004	1.13191388028837	-0.967812599418735	0.333137970208853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.869874106102352	0.61242769162773
Merged-chr2-49727868-1	2.23241639740859	0	1.40261454831928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33172014-1	2.08056651922218	0	1.3649723390512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101746616-1	1.89322358495436	0	1.45045411603453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108991639-1	1.57305889130145	0	1.46397338316711	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88041364-1	2.69188763325474	0	1.33499501756753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28038410-1	3.38111996935496	0	1.33538065216718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157141928-1	1.13130560794054	0	1.622647230437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46185317-2	3.12941910152207	0	1.32668648937792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-26659836-1	3.1552329980269	1.30998601393398	1.79608813888052	0.729355083181207	0.465784485897619	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46387107893443	3.14680903794924
Merged-chr18-32569571-2	1.68879423119789	0	1.54866668240016	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-10825701-1	1.6182506503907	0	1.44801414361516	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96760190-1	6.54333357078652	1.47982457072908	0.602057162536893	2.45794695721837	0.0139733810905264	0.142095325356604	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15455456733985	3.58132906412137
Merged-chr7-80206334-1	1.98109344480351	0	1.4436220368971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-43795050-2	3.23913547599521	0	1.32092449925263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7645519-1	2.15991025782939	0	1.38723971851812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-170676179-1	1.4759995339986	0	1.40019473832637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136688636-1	1.41648855767046	0	1.69377070785777	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118083802-1	3.99933165768545	0.423712556623457	0.883989325271664	0.47931863486388	0.631711967171257	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74696025155987	1.79586598792836
Merged-chr15-34397863-1	2.34345840659796	0.657978180153792	1.53540938619354	0.428535989209364	0.668260937361638	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	1.03295826569721
Merged-chr9-40786982-1	4.09524516118345	3.54406241166997	0.903379765549842	3.92311467095223	8.74115204791085e-05	0.00284603548441845	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816786730080585	3.77212326512036
Merged-chr13-45941630-1	1.62188268392572	0	1.52287193898055	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99247936-1	2.9256429410223	0	1.36060187845549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28818051-1	2.02249601722658	0	1.39464023376699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38640749-1	2.11755330268546	0	1.39552318752856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-42683092-1	2.90799799095812	0.0671120973722964	1.37541818308817	0.0487939582284804	0.961083497076417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69460750394291	2.03169262342392
Merged-chrX-107250595-1	1.71071889164705	0	1.39025264962663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106329907-1	1.81131311700461	0	1.47620984007616	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69525271-1	0.974585643956844	0	2.05378058173541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-21621960-1	2.9790866726707	3.7493858803282	1.40941507118186	2.66024250555529	0.00780844076958621	0.091214312726001	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.64087847020211
Merged-chr1-173909252-1	5.04284709292785	-3.17872394754735	1.08639748719594	-2.92593087245795	0.00343427238984678	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11203793325437	0.61242769162773
Merged-chr1-175924066-1	4.06918071528874	0.591520059032862	0.865403833194349	0.683519111360373	0.494278878074424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24164044085448	1.40000983364339
Merged-chr14-58123080-1	1.06531399061634	0	1.65019437859437	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137816048-1	2.39161210644852	-1.19276240621713	1.12508848804776	-1.06014986277817	0.289076426280877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27936960827071	1.29358708977899
Merged-chr4-137653701-1	2.40811002872013	0.973459309749094	2.27744525011371	0.427434780133789	0.669062679374267	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702988096853987	1.73495917314228
Merged-chr10-66911805-2	2.89545626271341	0	1.34661498060762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111119959-1	1.30336627798709	0	1.63317003633491	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56172130-1	1.41052668329232	0	1.6061044625781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101619702-1	2.25648203810891	0	1.35894180037465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130112455-1	1.89618400711208	0	1.42708252007426	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100543059-2	2.09921984553235	0	1.39157539117881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34260238-1	5.1365916990459	2.74522694143985	0.918329902853417	2.98936899790581	0.00279554296623941	0.0420819052457683	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28871289135339	3.86916981178075
Merged-chr2-85047344-1	3.96639177200105	-0.923594791999685	1.01564591123024	-0.9093669179261	0.363156478297593	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95372304845571	1.20440436174322
Merged-chr13-94713637-1	1.96728243662898	0	1.39480270697718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-6476646-1	2.71123394592994	0	1.42766153405485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150115722-1	4.88682365214152	3.27753375241009	0.990390846063576	3.30933364886906	0.000935183202901758	0.0180907287083535	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	2.96022219655055
Merged-chr16-77020421-1	2.63347346987092	0	1.34672011474524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64556131-1	2.19332628944297	-2.52922117055838	1.17989885969559	-2.14359150343692	0.0320656321705974	0.269777365755099	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39298123733419	0.61242769162773
Merged-chr12-5181761-1	3.159437547929	0	1.33338748674461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6335232-1	2.23316294792935	0	1.34941835186907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24257538-1	1.84496747469815	-3.88639428458252	1.26412506698391	-3.07437482736982	0.00210944220339768	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33922091751641	0
Merged-chr18-57957776-1	1.81838927981586	0	1.40260450608518	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-152124616-1	3.31191840655881	0	1.32481897134202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77545518-1	1.92542162111959	0	1.56988073520575	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93477715-1	2.05671689307602	0	1.44123455670222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61494651-1	1.76665412293454	0	1.40843272911046	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115212633-1	2.93714757029426	4.90544625316832	1.40032895709018	3.50306706744221	0.000459933642841942	0.0103458946041823	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	3.75407002026863
Merged-chr9-85206094-1	1.14945564572317	0	1.49208059639237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-106688615-1	5.08616348448321	3.09194209337147	0.77489568769232	3.99013976007459	6.60343731548536e-05	0.00228432088310062	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29727068782171	4.21750824656562
Merged-chr1-184484490-1	2.1419360475368	0	1.38905863426124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-83448796-1	1.06350302831142	0	1.51005772894557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102654878-1	3.19939084644951	-0.897323845331388	0.807982599440241	-1.11057323010798	0.26675209085745	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50708307958271	1.77128661274154
Merged-chr3-103907576-1	2.05699203268886	-0.378169740961279	1.6233136303048	-0.232961600211705	0.81579122401662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr11-95853937-1	1.89263645278486	0	1.37644136653532	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70989304-1	2.09987066860459	0	1.50206897543624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-80902959-1	2.01057265369245	0	1.36248743455743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53170127-1	1.48100137354723	0	2.43324591862826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64059498-1	1.80453369255822	0	1.39721100877762	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150373068-2	3.52820617180689	0	1.33342310199264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93767730-2	2.88511521520448	0	1.32559069005208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-77050022-2	4.97112853517049	0.852498672102523	0.9940620470195	0.857591007179656	0.391118342478076	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.817773273751962	0.843323834477631
Merged-chr5-99341495-2	3.43756384862475	0	1.37999439181435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33558491-2	2.54415030176158	0	1.39879203946149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171109153-1	5.02710003026331	2.96955031395088	0.870269032515425	3.41222105234251	0.000644358376642775	0.0134096313630888	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29461646385667	3.77826303566396
Merged-chr11-21448186-2	2.83486548680701	3.97715073248768	1.11176082582726	3.57734383160001	0.000347103469249615	0.0083511867826161	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.97271257483112
Merged-chr2-102942670-2	5.07334644287062	0	1.30091265222702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84935908-2	3.52790348159728	-3.45040727274155	1.13340481522823	-3.04428499542482	0.00233234076893178	0.0364916214583456	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96372422302112	0.306240821987646
Merged-chr17-47716039-2	4.09958975365629	-0.670316591208473	0.747406036987342	-0.896857341305935	0.369795045558972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51750706282472	1.96027510505613
Merged-chr5-24486257-2	3.02952647910492	0	1.33621562854526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125932573-1	2.24467369770782	0.378582778338384	1.4150049041321	0.267548739395069	0.789046692762654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	0.581381506691384
Merged-chr12-83939497-1	1.98511726885791	0	1.40632813779743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90207880-1	4.05727378527356	3.53008881658047	1.14307558537504	3.08823743744143	0.00201347528872406	0.0325755276595598	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.761571207890147	2.82216449091747
Merged-chr15-38469275-1	2.39901221634053	0	1.36635653577428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125640356-3	3.94223899789602	0	1.33715562534827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69898944-1	5.97945928656035	-0.283324945913918	0.715240965822754	-0.396125165437084	0.692012694242371	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62130861946624	2.50224159696657
Merged-chr5-43865175-1	7.28913854814595	0.226903333094979	0.615555268801455	0.368615694796637	0.712414195416844	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02883448529833	2.83098930992088
Merged-chr8-70000732-3	9.2770585904082	1.00823567044854	0.639359266770206	1.57694698872788	0.11480772330266	0.687079905388372	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82628476324692	4.13812511913666
Merged-chr7-141911523-2	2.34836919537654	0	1.36026979606382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43520801-3	4.10007065187642	0	1.34701280268152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20811958-1	1.33677628904866	0	1.41540837830445	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103104133-1	3.18677971288914	0	1.34733241365483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-102841286-1	3.7443033389618	0.297132939574082	0.757521017150075	0.392243822741641	0.694878067314382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23444382761193	2.09032553771468
Merged-chr11-6680529-1	1.61285039488066	0	1.45771207616804	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73451787-1	2.19441050348632	0	1.4022138243418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99188767-1	3.19291693268274	0.00533230854108103	1.19488150097246	0.00446262540406	0.996439351907857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00588813740803	1.27256041875316
Merged-chr11-77441192-1	1.45046121002488	0	1.52473869208899	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159211094-1	2.28725989399603	-0.133097112550865	1.04569816102929	-0.127280622182462	0.898718296816863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55569035741572	1.76863173449358
Merged-chr19-10940962-1	2.0359824962432	0	1.36348821927497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114964299-1	3.48178280304208	0.68040072667827	0.980892852159129	0.693654485482875	0.487898915697841	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33632299089636	3.2877026006244
Merged-chr5-130845732-1	2.62519275741457	0	1.33637299976103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59201385-1	2.37928001580917	0	1.38824174564666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92753401-1	1.05760153583064	0	1.6859460413284	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93823033-2	6.05599096390612	0.613433379203306	0.617264002666219	0.993794189445089	0.32032307555245	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40727412616001	3.08133663304271
Merged-chr1-20466522-1	1.70404721145768	0	1.41818132167463	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139597854-1	6.23345158133488	1.5649631033016	0.641144358839707	2.44089038876322	0.0146511009313945	0.1471324483576	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54273225935296	3.77697822978002
Merged-chr1-88238728-1	2.54383119053843	0	1.45293762085612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184231196-1	1.71041512453863	0	1.44700787412435	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40781753-1	0.704057730603551	0	1.857244939705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32131500-1	1.52535147314128	0	1.41715680589968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59565917-1	1.57546915911185	-1.2985057403799	1.41720699592368	-0.916242824170917	0.359539549002689	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.80132158588404	0
Merged-chr5-115495806-1	3.57467662837263	0.819941535147194	1.58955209819821	0.515831809524593	0.605971883703289	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41301632760795	2.66067886431113
Merged-chr7-109470866-1	1.07578485637175	0	1.85733072215186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76531245-1	2.49392846004611	0	1.38600398073483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43035315-1	1.79648652827687	0	1.42062279104791	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26809457-1	1.7856718133425	0	1.38986799981788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50799997-1	3.62586366237198	4.31328163411311	1.09870058898166	3.92580260479419	8.64410232470528e-05	0.00281865025204686	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.75238521850622
Merged-chr18-69510957-1	1.45827473801301	0	1.49929704811078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39103114-1	1.6527051463512	-1.94048810948347	1.6349544753082	-1.18687592761118	0.235276563830553	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5083083976462	0.469435083901436
Merged-chr2-160336523-1	3.10420458176148	0	1.31963266572479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140822280-1	3.39139634748675	-1.17540197252111	1.04195522129921	-1.12807340324616	0.25928892049837	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10348966184148	0.793480537552656
Merged-chr12-104177458-1	6.50147235433211	0.582313173382155	0.811222022671358	0.71782219553729	0.472866926007378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.82782999221406	3.56173046451715
Merged-chr11-37186301-1	2.1555356095323	0	1.40583747491219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46305549-1	3.89583805034803	0	1.38462658416773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67182473-1	2.07502528714704	-1.4126693780319	1.41457107146723	-0.998655639526575	0.317961536933242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	0
Merged-chr11-110782059-1	1.57353230994521	0	1.48741108963867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35600051-1	2.46498881994031	-3.59758095438859	1.18805633303255	-3.02812320793379	0.00246077736351998	0.038101148701548	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45408400596338	0
Merged-chr4-95326084-1	2.2901527791582	0	1.37846834456486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126576159-1	2.31838527541683	0	1.39348054764418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98716359-1	1.64453233948508	0	1.41072434967093	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11345406-1	1.47056909687617	0	1.4298608403636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54967914-1	3.23005275487456	-0.264235016290558	0.829398705335837	-0.318586241563477	0.750040287864315	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98073746390951	2.56785779735851
Merged-chr18-60515694-1	2.47936072770055	0	1.36169909245155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94296964-1	2.00181474443747	0	1.43742058877598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44952688-1	3.86676210697458	0	1.34803189006175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-38014269-1	3.99878302101363	1.79969466827497	1.00567809847492	1.78953352072015	0.0735289340230146	0.493967484596269	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18122125943195	2.79052205812141
Merged-chr1-161412260-2	2.76188716805945	0	1.48386398688841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89029520-1	7.67459035551223	2.07459833544942	0.754067310558118	2.75121107413331	0.0059375371563611	0.0742295286911103	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38252201092912	3.63051091633326
Merged-chr8-70561398-1	1.47610502222229	0	1.45359007361408	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24929652-1	3.2876435166816	-4.47210773613193	1.28096330707386	-3.49120674373389	0.000480844011928109	0.0106819704322325	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9918769233471	0
Merged-chr19-5073145-1	2.31673173595469	0	1.3761766552356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120629794-1	2.21400822012886	0	1.3615607368877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148401029-1	1.31563083366399	0	1.59798059416752	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3023237-1	1.41427431831356	0	2.40824257131146	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33049063-1	1.57965812456139	0	1.49576920142009	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74697977-1	3.63088806027605	-1.3754437031091	0.959593107319368	-1.43336138267126	0.151754588417155	0.83613451388764	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20470383739626	0.892489746801999
Merged-chr2-129374426-1	4.34327866224217	0.900361316801083	0.954914680126074	0.942870955426312	0.345746912700046	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77407174003662	2.90657679739794
Merged-chr8-39428767-1	2.71768647253511	-0.122697300770572	0.834002473985551	-0.147118629258044	0.883038385851179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79090149259543	2.26087918380575
Merged-chr5-23890941-1	4.55997050953248	0.266361004983948	0.798222616146535	0.333692631098103	0.738611510707785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38078573219888	1.76891977860032
Merged-chr7-80328581-1	4.75125712437954	3.44217081789767	1.50407332092656	2.28856583652263	0.0221045907746406	0.202750302078244	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.727571417065705	3.41501907634905
Merged-chr11-77630540-1	2.11286678818745	0	1.34670715248814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-24255305-1	2.62357982045146	-0.0237490297003212	1.32899879976154	-0.0178698654239435	0.985742669082529	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22976796090859	1.03956264035389
Merged-chr5-124583412-1	2.80536066856115	3.59240948128065	1.19124797254357	3.01566891535613	0.00256413073688563	0.0392770012031243	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.68348383313306	3.64657622174718
Merged-chr3-79180906-1	2.70371313072002	0	1.38157531097944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34347304-1	1.00341252371019	0	1.54369620657926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-144312428-1	1.26629183313278	0	1.45353987599991	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99865399-3	2.72307453596618	0	1.34573303067656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81837541-1	4.79880087633951	2.77626765032616	0.700266733884612	3.96458594416629	7.35234543391079e-05	0.00248421077933989	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5097723403857	4.13531823222829
Merged-chr11-80169351-1	2.76252496777653	0	1.35549082881775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-36970832-2	2.63841678257366	0	1.36008353441499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-34500293-2	2.31363557867366	0	1.52303848972483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79838224-1	1.82172768088915	0	1.41252935287988	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-67378768-1	1.96538667604037	0	1.37966781788103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122639649-1	1.18460130210469	0	1.66616135315216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66357046-1	2.61988418137948	1.46247896073858	1.26079717708618	1.15996370178945	0.246063584968047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.73596151290311
Merged-chr12-91314407-1	1.91602452218816	0	1.38842866497403	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24035888-2	5.69791674209589	0.973163781887495	0.764854682840195	1.27235121091731	0.203248360726498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00768778493317	2.71994542033907
Merged-chr13-76690377-2	5.14469432661951	-1.10811309688873	0.81552184616783	-1.35877794334486	0.174216964655245	0.923097931003898	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64870445934965	1.41959898789419
Merged-chr9-114928694-2	7.6200426145124	0.927882081676445	0.631829523757001	1.46856398251074	0.141951090048266	0.797107152212253	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12952546662065	3.37304054512731
Merged-chr17-67348485-1	4.87727164690516	1.25280472456164	0.823411874131716	1.52148003194964	0.128139418512	0.742520035655328	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.982587073406392	1.47711801254374
Merged-chr17-30559742-3	5.22543152571322	-0.36118065143842	0.646255428119256	-0.558882193824715	0.576242122400947	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95217347043184	2.58707500045288
Merged-chr19-25019538-1	3.18611237384684	-3.19784527715944	1.1430950800922	-2.79753218507556	0.00514946364825399	0.0666858603961168	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68975439900691	0
Merged-chr15-101976810-2	2.55257683303106	0	1.35359890449976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31349937-1	4.28717444271047	-0.154225730233704	0.736519477536375	-0.209398033504263	0.834137527775041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39863179929702	2.22017310661124
Merged-chr6-83696871-2	2.67211998088565	0	1.34824235914673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118511843-2	1.89949290579077	0	1.48439667429402	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62466815-2	3.4674681233949	0	1.33650167023219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94233814-1	2.49404259643932	0	1.3617336363247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35540210-3	4.00478208118097	0	1.31600682850978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-178309028-1	2.57797424346314	0	1.4119761957386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrUn_JH584304-25326-1	1.59175833558117	0	2.43325295508896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129892880-2	5.88385600797806	-0.459946477779887	0.629927104844331	-0.730158258380627	0.46529345399191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36432466702359	2.27725416190718
Merged-chr11-11776051-4	10.526716912147	1.07513522465761	0.555954560400157	1.9338544932229	0.0531310205700448	0.387143138957421	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08173894980434	3.22057192742703
Merged-chr18-75465129-3	4.00259355688109	0	1.32248582979463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-138165600-2	3.35660991776869	0	1.36093968652496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17788198-2	2.67901900363353	0	1.32165379974716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5886433-2	2.92545974057284	0	1.34536882596342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40152458-1	1.95487735172497	0	1.41106080865965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26503396-1	2.67327502284598	-3.8921226780886	1.15255962908269	-3.3769382337175	0.000732975075220521	0.0148563862485608	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38127795657535	0
Merged-chr5-114650611-1	4.1446059364574	1.52211980481126	1.07421470138579	1.41696050412237	0.156494475197912	0.854326480892461	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76202992743303	2.79663408657972
Merged-chr3-36341054-1	1.8170407585392	0	1.62266389089221	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-30373963-1	1.8827524236315	-1.14707868674451	1.5548064743884	-0.737762998572363	0.460658481815821	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581562804033966	0.420961122473315
Merged-chr12-24688447-1	1.94746626059457	0.616776104380895	2.37543099296297	0.259648083319636	0.795135242832093	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	1.5713323725813
Merged-chr18-35477988-1	1.43743914735573	0	1.48128798482668	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145233418-1	4.41219748493422	0	1.31383155901013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8506224-1	1.73523047970606	0	1.42863945420559	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19094065-1	3.33466901791012	-0.316843881840588	0.75008779572864	-0.422409061505665	0.6727264649378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48240782477718	2.00098049458557
Merged-chr8-22935068-1	2.51414651711348	0	1.39560063649348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186579571-1	1.80048361035654	0	1.37578633603959	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38945203-1	2.15470216717275	0	1.36610650817861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104715188-4	3.23022731133801	0	1.33869096274652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37524550-1	4.0327259271788	-0.886476638442191	1.26064466922198	-0.703193104357702	0.481935415979205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92923891019453	1.46928333126936
Merged-chr17-49971255-1	2.05838960497999	0	1.42319094178244	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25216005-1	2.28863647456219	0	1.3268098151422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97751754-1	1.8484935400384	0	1.36762203180438	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4633871-1	0.801482736473538	0	1.69104380721644	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21758642-1	5.09409006985567	1.99169419224337	0.778439778543171	2.55857196297288	0.0105103064077637	0.115294020903429	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16187436127719	2.71642742107674
Merged-chr6-48546470-1	5.40767906527996	-0.21387218420066	0.780915818182247	-0.273873545932895	0.784181801869129	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31633903207089	1.8763281121661
Merged-chrX-106130911-1	2.67263471991156	0	1.37433247177219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3370216-1	2.31916148655726	0	1.36331965403328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-63953478-1	1.36855061603661	0	1.44075062334324	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56412878-1	2.08279295964166	0	1.45560055620897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-148059037-1	2.54325424601919	1.64591888497982	1.2278936685199	1.3404408925439	0.180102048643509	0.944614212268941	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24309350863098	3.36834648824076
Merged-chr11-70151274-3	3.24834003149789	0	1.33707363484604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103374989-1	2.50528154432246	0	1.38228554036477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112593983-1	2.90697313023936	0	1.3459467447012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70862718-1	1.96154790907898	0	1.38838198843405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19466852-1	3.0319830928376	0	1.37523429692242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114651125-2	5.21933192846479	2.64983010014262	1.16856469256631	2.26759384140152	0.023353973400011	0.211574760265787	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.29684500016202
Merged-chr18-65426831-1	1.46780477655026	0	1.64621356590599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40113396-1	2.07777224877175	0	1.38273994541689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45758222-1	2.34581796189107	0	1.41565435078363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123900394-1	3.04038957393041	4.70948943387043	1.19706247670219	3.93420521111371	8.34724454085873e-05	0.00274771813473928	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.44575596919856
Merged-chr10-84398667-1	1.70873316219359	0	1.41219231777752	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108609950-1	1.64951843373757	0	1.4763289139514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126111146-1	2.91884202277536	3.52979198138678	1.98639406154641	1.77698476335497	0.0755707467664832	0.503954078804226	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.02918678136929
Merged-chr1-45817086-1	2.56598099936943	0	1.34979043882788	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58488696-1	1.57284015268866	0	1.41801626413385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70376982-1	2.49592475812778	0	1.38036504501538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95001261-2	2.7984336083926	0	1.32452947929662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4731599-2	2.96650906120446	0	1.33990951195169	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88432776-1	1.42115214334712	0	1.47325102812672	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86931234-1	2.68352206197183	3.94434038974388	1.37730091948814	2.86381888949131	0.00418567258842528	0.0567933889043268	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.78734291970211
Merged-chr10-125318731-1	1.65028836445984	0	1.37619718341453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76852022-1	1.5445428685482	0	1.44263666266217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146645696-1	2.52820022720983	-0.954795137646861	1.28236955703447	-0.744555368153674	0.456540557723957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr6-99440059-1	1.44212355749398	0	1.50273611925454	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-86781788-1	3.30961243681994	2.27028397230187	1.01632822057727	2.23380983262705	0.0254955883079579	0.225811156623992	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08202248547146	2.41396759389214
Merged-chr14-30218261-1	2.87971047673438	2.17111282901134	1.13333412763187	1.91568644769212	0.0554050184755059	0.399878102197969	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	1.775524153257
Merged-chr4-46689597-1	1.92264010624523	0	1.38503861826878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50437346-1	1.20299648280837	0	1.54956922833973	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172336699-1	4.18386323307874	2.66023079937095	0.801450716255737	3.31926935170657	0.000902533283254685	0.0175735816232302	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0880951631042	3.5588424040667
Merged-chr13-11895841-1	1.27919375703635	0	1.6710702124048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-30998566-1	2.10905473123519	2.51065207857768	1.27976995260182	1.96179951988514	0.0497858296165026	0.369525955104564	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr14-54388904-1	2.91565169848357	0.359679005628423	0.897260486296893	0.400863529734674	0.688520602257844	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66428617868575	1.99834080004871
Merged-chr2-29412619-1	1.21625485180959	0	1.60427050600652	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13342846-1	3.57235475278159	2.0502730547778	0.92915809921104	2.20659224357912	0.0273425593426448	0.238548315461211	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.96027510505613
Merged-chr19-59389369-1	2.1628179718829	0	1.36844251526719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-114837168-2	2.01750476268178	0	1.45455034419882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76322459-1	1.15700940521913	0	1.50249396834511	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54476731-1	2.51424280329553	0	1.39183022477391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151709010-1	0.718591007834399	0	1.64935961072498	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70028569-3	3.32926213672918	0	1.31818579085708	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95508278-1	2.57305246080192	0	1.35895025109172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99917431-1	1.66915494149873	0	1.58042517335514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111478923-3	8.64999521577753	1.7890523741322	0.702759238042379	2.54575433133519	0.0109041898361527	0.11857966201252	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75813960776214	4.88349290874147
Merged-chr4-148060527-3	3.4961965644846	0	1.35637981841136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-37014496-2	4.58001793442146	1.41544020534359	1.39296381902153	1.0161356569461	0.309564791293104	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.61242769162773
Merged-chr6-125218755-2	5.23073269154351	1.33528820426847	1.04201471954258	1.28144850473382	0.200036176389689	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12891688782016	2.35686799001988
Merged-chr7-110930632-2	3.29666823170932	0	1.32322113081204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143434608-2	3.22464728990366	0	1.33539151687177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-149376059-2	2.51995076057823	0	1.3561000010398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81849936-1	7.55886718726635	-1.7469383028285	0.703046236280858	-2.48481282265284	0.0129619568228892	0.134681512251315	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49362474632059	1.34557707159302
Merged-chr15-74528299-1	2.59540622109225	0	1.34557046666068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-187098426-1	2.2785285079402	-0.226542371329089	1.30163286038674	-0.17404475426487	0.86183029011851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.382164212378408
Merged-chr15-6525613-1	2.06992170395422	0	1.38267759934099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123200972-2	3.93330269590624	0	1.30997986525549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150441937-1	2.01465088545917	0	1.3469900543949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41036578-1	3.52994608400846	1.70691053514972	0.990086177381929	1.72400198502244	0.084707484814929	0.547236312675862	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.91040095767016	2.08939397228322
Merged-chr2-102852221-2	4.85532445848525	2.05203198453905	0.744550912354722	2.75606671147481	0.0058501063946565	0.0733744822390065	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63619808933401	3.95110112402599
Merged-chr18-70482085-2	5.24541501113895	0.411110542698409	0.679121924080835	0.605356016528005	0.544942468936285	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87599254815614	2.48834673140933
Merged-chr4-86883625-2	5.08948571289342	1.61662825673154	1.46998210275398	1.09976050300396	0.271436485522251	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65589765405735	3.26924367160755
Merged-chr11-20436297-2	6.04129287484653	-2.02537221130919	0.825863146532541	-2.45243079293815	0.0141894671683542	0.143845008002369	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12082493563513	0.773587911294612
Merged-chr17-66094981-1	2.03139793047322	0	1.35729764815275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181334228-2	3.02043104607992	0	1.32407784336429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112993431-1	2.26070144648835	0	1.41209436434148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57510902-2	3.26631249903718	0	1.33853944363228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88522782-2	3.59947700887758	0	1.31796958744073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23467259-1	3.39138322198604	0.454635756824962	1.18804516361115	0.382675483011995	0.701960394962015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25313614712554	1.40000983364339
Merged-chr11-115248184-2	4.45129188655246	-1.1025934800546	0.834445894369072	-1.3213480795999	0.186385329503464	0.96875387782426	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60874319122241	1.26501898168246
Merged-chr12-86974733-1	2.36385330097899	0	1.35597102391454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121800114-2	2.33418628107042	0	1.43851471818541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96376771-3	2.99024223656433	0	1.33368831803136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4309784-1	1.48486798795889	0	1.69153880990246	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169780131-1	2.72725258561112	1.98162837094984	1.29079170362028	1.53520383295925	0.124733767124748	0.729448071105581	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.73596151290311
Merged-chr1-13382458-1	2.9391851738806	-0.713067812106592	1.19437319556767	-0.59702261801654	0.550492279860966	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59651212572215	1.64254215594465
Merged-chr12-34663324-3	9.79585327083499	0.305334272851106	0.518673177624863	0.588683367528874	0.556073697355427	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43811357750728	3.65443278894413
Merged-chr7-28972884-2	2.80658210866956	0	1.37436799804773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173768920-1	1.45883901023459	0	1.45377819703015	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33513588-1	1.23804293405288	0	1.4774028958979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55823747-1	1.17625091113869	0	1.44705144394645	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35189142-1	2.2862417096818	0	1.42204716578251	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58108423-1	6.30586447815509	0.921207463542276	0.726575627978931	1.26787553568889	0.204842401880348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08932932110335	2.5392607781143
Merged-chr3-135522748-1	1.42091952651941	0	1.44593012451892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48407502-1	2.56431135874132	0	1.44391030300104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149462730-1	2.74328405822684	0	1.35786578802728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36509480-2	3.67939805953935	0	1.42839827629307	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45194141-1	1.64798550043707	0	1.45321630041673	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38390276-1	1.07559214159315	0	1.46802298970184	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-118174218-1	0.932159636742998	-1.13701378842694	2.43516883670429	-0.466913739733034	0.640561594698499	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55482115558778	0.733321818366247
Merged-chr15-36760827-1	2.4080286983132	0	1.33739314077586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25341871-1	1.71378265969612	0	1.38151722504805	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54719155-1	2.80232323241631	-2.59001713989938	1.22607203959428	-2.11245102755662	0.0346477822082455	0.28497313840214	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5199986947486	0.61242769162773
Merged-chr15-101258973-1	6.53882200116541	0	1.29560971356955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127467995-1	2.06534197104031	0	1.39063337342493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122151030-1	1.72149366448136	0	1.42218630765701	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8387029-1	1.78782653866231	0	1.39916197631242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73452426-1	1.8514622001665	0	1.40003846954734	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5108356-1	1.98181703529523	0	1.37726570393132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124898127-1	3.19440242793299	0	1.31459766572312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75100528-1	1.55760556362202	0	1.41397539579485	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4417326-1	4.74555147165097	4.42904368124092	1.08333534095749	4.0883404369753	4.34470234533686e-05	0.00163037713600708	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.12069662938216
Merged-chrX-152151897-1	2.46700074030157	0	1.36934898585721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105298713-1	2.11546340794301	0	1.44458703495887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39893329-1	1.89312986104261	0	1.41271695776649	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88510898-1	4.57089667014607	2.79927605576681	0.912579932115284	3.06743108987541	0.0021590723550673	0.0343527494799679	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.947437291748982	3.76463764896075
Merged-chr10-49586947-1	3.15972894237675	-2.71739253930882	1.10677100425673	-2.45524370340161	0.0140789106729436	0.142812868182889	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94020883650622	0.581381506691384
Merged-chr4-139599488-2	11.7395361311408	-0.362473682857446	0.590859827279932	-0.613468146118719	0.539566838792473	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15754968256112	2.32131143445014
Merged-chr6-136819254-1	3.50104496542988	2.25765955833096	1.12785961050523	2.00172037131432	0.0453148141931793	0.345233039228815	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17267789052377	3.72764730920313
Merged-chr3-69672811-1	4.72333347247945	1.28968656832898	1.00940396441067	1.2776713920298	0.201365316338819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86889431619022	2.84443791261164
Merged-chr8-36124205-1	4.11595778364732	-0.194709592935288	0.655598463018513	-0.296995194343203	0.766470178060712	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62813613388642	2.60429063827851
Merged-chrX-60021246-1	1.74003280517455	0	1.38742529790489	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-57499376-1	1.65036547015771	0	1.40511200328424	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107770778-1	1.98992988354259	0.0948879957732202	1.3661276632626	0.0694576343960476	0.944625354026331	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr9-124025428-1	1.4330629934302	0	1.43501787384889	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119616178-1	1.76625522884133	0	1.42111385903281	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-76350055-1	1.31285310717751	0	1.48699008296851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27666937-1	1.81286841024783	0	1.39602517612625	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118104182-1	1.84593071026652	0	1.34560538836627	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36798519-1	1.96264446188895	0	1.40017683204059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116767889-1	2.35950955438352	0	1.36649547632805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118621269-1	3.12559469933064	3.26486343413462	1.12759045707231	2.89543372210825	0.00378634977369811	0.0528116995329939	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	2.42786128734841
Merged-chr7-25771226-1	2.34076790316392	3.1891816461648	1.17504299380267	2.71409783555577	0.00664565363659156	0.0809782356366547	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.42690496303314
Merged-chr2-154687852-1	2.9608813915079	0	1.37765019738215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72144854-1	2.18161954298478	0	1.50617619649965	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25185926-2	3.24241412073161	0	1.33150700580963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92553004-1	2.34866912960303	-3.99469335615332	1.13826532216393	-3.50945713479094	0.000449022429706315	0.0101388457814751	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8003150809443	0
Merged-chr19-58904192-1	1.9767084474019	0	1.39399729298871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157578704-1	2.63996737016629	0	1.33409481128904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18318647-1	1.57698742213353	0	1.42670650434099	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-45752056-1	1.86179704507196	0	1.41479714380895	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129634122-1	3.31383148672064	0.228061862753737	1.33551286393717	0.170767252725217	0.864406779337654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.306240821987646
Merged-chr4-150544391-2	5.50429740681797	-0.026955058335445	0.749067798131453	-0.0359848045833559	0.971294475293222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40943616521036	2.09197273807469
Merged-chr17-78605854-1	4.15678310874925	1.38434627078516	1.07842660002286	1.28367222280664	0.199256667480029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54169005884002	3.09045752086053
Merged-chr10-68241944-1	4.71762185794567	-0.723832485710571	0.826168885998064	-0.87613137940451	0.380958615597816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5995172570328	1.99834080004871
Merged-chr7-35123687-1	1.64667016629924	0	1.62736130816399	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164518005-1	2.41122954423378	0	1.40453080286001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135153874-1	3.65703952746851	-0.76073984615712	0.828518441514929	-0.918193015433818	0.358517824675017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80686399570293	1.62128842389662
Merged-chr1-175155556-1	2.41319241042758	3.6429479627076	1.47847628173033	2.46398809891227	0.0137400673568353	0.14061995951445	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.34550506292392
Merged-chr4-7314586-1	2.11935278977276	0	1.39085663287749	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102550707-1	4.25667973897586	0.035322161781207	0.875960414228594	0.0403239246973427	0.96783488013796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26543765707215	1.83981375264212
Merged-chr18-55125091-3	6.87864424327016	0.351196927279666	1.06233401342805	0.330589930135425	0.740954253522009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800023534112536	0.73596151290311
Merged-chr8-22713227-1	1.96623453921387	0	1.40457605758538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-34500697-1	2.77706457350297	-3.5661492683754	1.17850392435844	-3.02599693956621	0.0024781481111746	0.038319230116615	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24503148989957	0
Merged-chrX-102660867-1	2.30264570788868	0	1.36010242976701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60826870-1	1.46290634059741	0	1.43242651970703	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43739806-2	3.62608555312948	0	1.31130023506614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12128416-2	3.72829660435236	0	1.32235791380712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-48225316-3	3.58976639743726	0	1.32564763378161	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24634533-2	2.89213867544323	0	1.32966228102685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-10885782-2	2.65293767323182	0	1.32435655707682	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76541164-2	3.09319750793849	0	1.34447232693475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82784883-2	2.66227460935234	0	1.32772268799653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117373467-1	2.25825664415413	-1.28297682468131	0.939069384652721	-1.3662215440617	0.171869437387317	0.913971018505662	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72703647351632	1.34591112769102
Merged-chr4-6371082-1	5.37576641672688	1.4928954872182	0.947629017131367	1.57540077417368	0.115163965825434	0.688581252706454	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994475741705525	1.97634481356229
Merged-chr4-150864150-1	2.19214203210478	0	1.36508560134204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29533449-1	2.17802485950586	0	1.35419519921263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32890099-2	7.06470022386242	-0.481380150283971	0.745122965343553	-0.646041220944012	0.518252660210099	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46298382122097	2.60723990317186
Merged-chr16-49755374-2	2.17931588248869	0	1.36753091560477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72655081-2	6.77895682136682	-1.91407450014884	0.832277856372357	-2.29980226614667	0.0214594250196813	0.197919829738244	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.42403381898953	1.47190689055611
Merged-chr12-33138040-2	5.89309256556304	-0.002020010561379	0.600491750813797	-0.00336392724569729	0.997315979449061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.811538084577	2.81520232277756
Merged-chr1-159305195-1	3.61471222531773	-3.53357295467906	1.07511854812818	-3.28668216247513	0.00101375182955791	0.0191957771817708	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13206080289449	0
Merged-chr19-26622930-1	1.21237198667925	0	1.5018249462763	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9656700-2	5.40418878869124	-1.57572964406479	0.767104758284237	-2.05412575928897	0.039963521500021	0.316080401348387	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27249345034344	0.843323834477631
Merged-chr9-90447136-2	2.88007141090739	0	1.3569826689963	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100495188-2	2.54978579933465	0	1.34110815863648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21936936-2	3.46682178128098	0	1.32048110141565	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99585099-2	3.1391348589924	0	1.36346834749303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50114225-2	6.47263204354766	2.63747143388302	0.827625877623158	3.18679188893601	0.0014386024653844	0.0251086850168293	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.668152277665589	2.48607140922088
Merged-chr11-51820142-2	2.35206909788403	0	1.3765935438441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76689563-3	6.62780264813707	-0.359668734578904	0.780062492227302	-0.461076821617133	0.644743490399991	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85465177116347	1.7821740460218
Merged-chr11-70815878-2	5.96970296131285	3.0748896143947	0.873326652909105	3.52089290319041	0.000430096288062259	0.0098193901082089	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	3.20726183519
Merged-chr11-61147384-1	2.77756521922976	0	1.33101696507136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140063295-1	2.04063376807305	0	1.38071817222518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54699215-1	1.91548551442936	2.50575092380983	1.4807466204831	1.69222126807375	0.0906037928552277	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr8-75234112-2	3.2695515075136	-4.05873123110119	1.25114592579106	-3.24401106812138	0.00117859166418949	0.0215490349435161	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80018622454382	0
Merged-chr1-171393023-1	4.8856008535724	3.5462986228295	1.03628360311073	3.4221313665334	0.000621322864110218	0.0130340172963552	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	2.91780731893528
Merged-chr1-134098129-2	3.17193542664329	0	1.33571553633088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97751599-2	3.21106373090898	-0.436437289602519	1.30656685527852	-0.334033645380881	0.738354170054361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	0
Merged-chr6-122826383-2	5.6128501614042	0	1.30984172304564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137966067-1	3.68016227744093	-0.29422789686522	0.894726826000904	-0.328846624818784	0.742271619644892	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87883150800682	1.29684500016202
Merged-chr18-4257693-1	2.03902215642194	0	1.39212799075329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127085377-1	3.06478082169636	0.158923199440785	1.06994332302438	0.148534222346995	0.881921179961368	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40213170619804	2.08706762733164
Merged-chr10-127385454-1	1.89168227982532	0	1.3899852131929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63122347-1	1.37585073100897	0	1.56338086115881	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37787805-1	4.55722938155534	1.61273558724895	0.779556051159536	2.06878720888654	0.0385660592586327	0.30789409306598	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96517904535452	3.71980362253162
Merged-chr11-98952019-1	2.43541464480369	0	1.39371494744884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88242694-1	2.33667455894617	0	1.34288265906547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55721029-1	5.60900253082197	1.78338379878614	0.81283244826035	2.19403617880043	0.0282328087389112	0.244357764218926	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19088308421624	2.45391569783273
Merged-chr4-88725973-1	1.76361540476245	0	1.41442421894105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-12813313-1	4.16688777640057	-1.0498196605254	1.02168068747258	-1.02754184687824	0.304165391198628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1908225130808	0.793480537552656
Merged-chr19-22979390-1	1.48842699726809	0	1.50086504047276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32346155-2	3.62116499602176	-0.490041653438736	1.16851125666139	-0.419372642450069	0.674943814641339	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48390008772665	1.03956264035389
Merged-chr12-17783040-1	4.13589236875629	3.07595851149893	1.07364614795365	2.86496488378565	0.00417055488423445	0.0566977865739093	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499615150807969	2.06239241693004
Merged-chr1-131759837-1	1.66274852749876	0	1.46615369204288	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94994357-2	4.56547267853258	0	1.32861094494459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55022748-1	2.96826201364862	0	1.34973061884759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13445023-1	1.06771652461804	0	1.67584258504748	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152770948-1	1.23285686399885	0	1.8939187985952	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17474203-1	2.08486852696585	0	1.3874769954097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117724150-1	5.17659064830217	0.113367162379471	0.794664363874242	0.142660433175548	0.886558366763193	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09821990982989	1.69442907999601
Merged-chr3-141492112-1	1.55343898842304	0	1.51774850643321	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128000874-1	2.28270926829227	0	1.41389614755322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90447008-2	2.06073594251476	0	1.36519344418092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10258601-1	2.98854009168051	0	1.37858222987156	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30285525-1	1.74337296814298	-2.53960564618573	1.32344762823964	-1.91893172951901	0.0549929744399677	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28433858737424	0
Merged-chr17-31693454-2	6.19953302281469	1.03540609738233	0.738461441683431	1.40211260729059	0.16088162289453	0.871323395202934	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3418036405716	2.9865626588057
Merged-chr18-82872379-1	1.8079788163278	0	1.50378058493767	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106227019-1	4.82515746492878	2.0944328951149	0.856560968949286	2.44516499238118	0.0144785889075188	0.145938280233028	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77894689031154	3.63408314561734
Merged-chr12-38815083-1	1.61952809745597	0	1.46425851872741	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8577763-1	3.12165058150587	0	1.34130847708004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80121806-1	2.57715722576428	0	1.39748696854829	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152685737-1	3.08142845023213	0	1.33355189832108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86830267-2	7.18637323875077	0.0278973010009934	0.658089300189368	0.0423913608578135	0.966186715196938	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02883979193621	2.58573450322345
Merged-chr19-55530253-1	1.33761902909222	0	1.63648060511888	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72725282-1	1.25200111717161	0	1.652045812637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141575738-1	1.559343265282	0	1.45278124791155	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94464122-1	1.54441695531055	0	1.42643281575105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107522142-1	1.51046433623733	0	1.44379264505198	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-116964591-1	1.92136384241179	0	1.42095688679094	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9638574-1	7.5879142482779	0.964043471766117	0.761415189433832	1.26612062005613	0.205469901285225	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94872964131151	3.08374337758267
Merged-chr15-25740473-1	1.19868773586172	0	1.50990879147222	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71297899-2	6.52450357987865	0.225675937892184	0.622514362417802	0.362523262942359	0.716961042785523	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26743897372721	3.3038113548719
Merged-chr18-82538266-1	1.72330046632211	0	1.49634935148313	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123020684-1	1.80450015003083	0	1.50679391459103	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62941580-1	1.49188241995528	0	1.44589592421762	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95494490-2	3.46662307764169	0	1.31944303581488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57706245-1	1.75959464569345	0	1.39870086041688	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54866291-1	2.26381737967426	0	1.52696586818083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28163878-1	1.92887344135724	0	1.36683426175728	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-44623438-1	1.63603436365236	0	1.41740225841151	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74986328-1	3.75165525876198	-1.70625829444148	0.770729009009866	-2.21382389204924	0.0268408958534275	0.234964108341245	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05882357115697	1.50282389800248
Merged-chr17-69106195-1	1.72362720720427	0	1.45688286566064	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75983005-1	2.68062768279512	0	1.36071548085368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171753060-1	2.51514670216594	-0.560081281712895	0.891596335898228	-0.628178088180059	0.52988728280817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75637437943594	1.628416560482
Merged-chr9-91388971-1	0.807854906163171	0	1.95518282919618	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31861614-1	3.08204221577736	-4.09941867321223	1.08866525084918	-3.76554562572341	0.000166185771789979	0.00473184115180303	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78903243327845	0
Merged-chr7-28954979-1	1.68939997854929	0	1.46464785514999	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-109394655-1	1.7225100235444	0	1.45642582586719	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-13562826-1	1.98002284909439	0	1.41069163588415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23506032-1	1.94712921282766	0	1.36880191410293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103848416-1	4.94271417654472	-1.3169808803692	0.855582005626324	-1.53928071384006	0.123735780201936	0.724974293291107	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56070259572838	1.41695929335733
Merged-chr16-76416598-2	2.23609178525092	0	1.39094290936923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47587264-1	1.47858105803082	0	1.58583466014184	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91146918-1	3.99851941460177	0.29785692654533	1.58126673268909	0.188366023510023	0.850589732226355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41879139860915	2.30095837608674
Merged-chr15-37941625-1	1.5603560447149	0	1.3702919452763	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67431010-1	1.95347143717122	0	1.56654537096332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102855897-1	2.24182954903091	-2.59114589824942	1.21902695461546	-2.12558540107654	0.0335377962500156	0.278753603886227	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29426787717726	0
Merged-chr3-54357753-1	2.32765356205161	0	1.37799904902635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75566986-1	2.44428790986275	2.3918569907771	1.35510592265502	1.76507013273974	0.0775519795764304	0.51365413109684	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.825079211029734
Merged-chr1-64599284-1	1.11297258112927	0	1.53971502432401	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-18549741-1	2.1877443818797	0.0878810794583698	1.60069620790281	0.0549017852509998	0.956216709601424	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.78925238951141	0.666688015277142
Merged-chr7-44860751-1	2.65869290157647	0	1.32630651320649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-143277307-1	1.52371725583801	2.36661298907284	1.59209026884635	1.48648166211563	0.137151763813586	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.918668513615376
Merged-chr6-97518104-2	3.89479365129632	1.56306638896418	1.14670932137885	1.36308858733675	0.172854593140803	0.917873902436123	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794190210767251	1.50690972966086
Merged-chr13-97551015-2	1.81235511106142	0	1.5552750335557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80158970-1	3.95351068185483	0	1.38191223855564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89619847-1	2.61032422671783	2.67180410121286	1.39822317531534	1.91085668467073	0.0560230008098697	0.403313761256114	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.0023426291647
Merged-chr19-55738308-2	4.28585168486467	0.690964191026381	0.605717242718047	1.14073719930079	0.253979301459501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80276844159924	3.31595548659585
Merged-chr2-45232998-1	1.61076537774296	0	1.45947294446817	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83690470-3	3.305019698289	0	1.32321253158101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31215335-2	6.38566287740335	-0.0689914917930546	0.687501121608379	-0.10035109707407	0.920065592588884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17590670348035	2.40270192041382
Merged-chr18-88847524-3	3.49456616539096	0	1.35299428594172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58477186-2	3.03508593313279	0	1.33424375191097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146385826-2	3.1235878902389	-0.20858987322493	0.844199790872216	-0.247085909615563	0.804841738213502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25066348395204	1.96334085054552
Merged-chr17-31093579-1	3.66466852283592	0.277743238395191	0.801945579563759	0.346336765826775	0.72908964118158	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51318680983946	1.79135360541375
Merged-chr6-72881849-3	2.8782093833017	0	1.3520525690481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127126799-3	4.05128746478435	0	1.30616347238469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101736212-2	5.17749810900256	0	1.31431130312746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-159950382-2	6.03274870738389	1.0932776818724	0.669561913657709	1.63282537368352	0.102505728917476	0.633229920350757	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89828203975516	2.88398917306185
Merged-chr11-110483404-2	5.59695674541696	0.171642517160547	0.846271872669174	0.202821956753898	0.839274195598979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66860850939354	1.50871668602081
Merged-chr5-148494785-2	3.16513642654917	0	1.31956980438011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53983988-2	1.98286103143909	0	1.41730288467451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51657378-2	2.32065201871587	0	1.50722508480932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-22052092-1	4.25441850308773	-2.35000296460565	0.939460803468026	-2.50143801202839	0.0123690093624877	0.1303653686776	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.29800359896535	1.00443616959195
Merged-chr10-54059309-2	3.40840987541705	0	1.33445410616901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127615900-1	1.94954622340266	0	1.40863365391709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124272270-2	5.35399487992878	1.4390969877925	0.817049483927307	1.76133394133634	0.0781818985466701	0.516674185116374	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33767252047995	2.84460451740528
Merged-chr8-120596143-2	3.0280033276266	0	1.36661894419751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115190928-1	11.0721602748885	0.957383543942892	0.547456211851931	1.74878560735344	0.0803280855824689	0.526438579928996	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4141138847401	3.49563079346334
Merged-chr1-74339327-3	3.55823444605089	0	1.32681300300217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62222894-2	1.82870480847061	0	1.50500829584326	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57543489-1	2.66877728085806	0	1.34406935890047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62353655-1	2.48113135500491	0	1.38644665932118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24150697-3	3.0819769050415	0	1.35881719402886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94388863-1	2.15656602146068	0	1.34062397514186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32912940-3	3.0232260382066	0	1.40734742803901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28726405-2	5.74843422686238	3.36974866617957	1.06108210550824	3.17576618122828	0.00149441349897405	0.0259029030514478	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708251031414953	3.28070747206624
Merged-chr15-79883028-2	4.96224058175088	2.59203273553964	0.819294264531769	3.16373841213328	0.00155756721663116	0.0267421932049343	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50258680195628	3.85493196052525
Merged-chr17-51099866-2	3.21868342586559	0	1.3700777852701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68905350-1	1.52522281007063	0	1.50739914757031	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56633854-1	2.11157948447411	0	1.3448991008868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25571038-1	1.60711510103528	0	1.38187619049672	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-83881282-1	2.3367265189279	0	1.35536698048909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-109218346-1	2.21222864070812	0	1.39717505258775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51629212-1	2.10767894343797	0	1.37381177505855	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30512973-1	1.45189787267532	0	1.45827309019721	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35104093-1	2.54318932880784	2.64137142232373	0.993180994020021	2.65950661382721	0.00782551935642392	0.0913643716035158	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11600064119434	3.34103802701566
Merged-chr17-13591028-1	1.82566743288106	0	1.67324493318584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59428121-1	2.42269853423992	0.736448300186348	1.49236319348006	0.493477930441994	0.621674930031082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.423054662900563
Merged-chr4-107674278-1	3.88703038986443	-0.808378164940336	0.736083263132116	-1.09821565769693	0.272110330665728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77701159288219	1.99834080004871
Merged-chr6-134239578-1	2.817976223628	-0.356511967963494	0.901324979921897	-0.395542091815082	0.692442864020801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4443735597975	2.05572638891514
Merged-chrX-169304136-1	1.60689107287502	0	1.50915665173046	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33398657-1	2.67823447895856	0	1.40991053904412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34197183-1	4.46860198288247	0.638723872875505	1.02121982431683	0.625451893575208	0.531674512320051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64197534362396	1.69469308021391
Merged-chr6-145334878-1	2.71111343214948	3.82176873815744	1.34912565895558	2.83277448085602	0.0046145929363953	0.0612025959045439	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	3.06977105931173
Merged-chr9-63978839-1	1.34973830229191	0	1.58671957117417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79808968-1	3.345487396041	0.462015207007135	0.990587174889202	0.466405399463012	0.640925347350146	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88575930053734	2.13691092425662
Merged-chr7-105412042-1	2.28340643031833	0	1.35187357692198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32090290-1	3.46369005937284	0.221762617364852	1.29204955353824	0.171636309735614	0.863723459987836	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67929438433561	2.62336090161495
Merged-chrX-142380151-1	2.81966638934026	0	1.34326663361071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64598255-1	1.27955017543945	-1.23235360513798	1.68378668691652	-0.731894137608822	0.464233184638721	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00438675778585	0.382164212378408
Merged-chr13-60625967-1	1.10157991478784	0	1.61572492709038	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3926301-1	1.89932956165646	0	1.37511558048214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91755295-1	1.92861230514184	0	1.3973977916325	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-103955675-1	1.44806793717272	0	1.42057336379432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-42172723-1	1.22722694558925	0	1.49101876261683	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-68656575-1	1.40525291296024	0	1.65810401298122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108431856-1	2.07143068391712	0	1.38241443454857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39264892-1	1.36191714271977	0	1.40498113810713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100750262-1	2.50108545120748	-0.428779593703778	1.3993502780957	-0.306413340830774	0.759289952045221	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0
Merged-chr15-102109328-1	2.37560490436971	0	1.33866524525927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32441663-1	3.0855876074191	0	1.36176223242439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14535153-1	1.59081085164357	0	2.27525900922878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122333334-1	2.6542251138514	0	1.32774454160363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128195102-1	3.25027100036273	-0.995027719487594	0.998728621658094	-0.996294386592871	0.319107130415243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44734260834426	1.22548804685604
Merged-chr12-8513823-1	1.85486127060765	0	1.50943788086134	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109476684-1	1.31526124237272	0	1.52428811264647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57465213-1	3.30852264390145	1.30533092316907	1.03817951623033	1.25732679441488	0.208635325379102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00094035035971	1.47954504644696
Merged-chr2-84779451-1	2.15798987036159	0	1.35409153980993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-86988339-1	3.85736340806008	0.0732117244427904	0.92933732267852	0.0787784184022448	0.937208870308004	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40280368769097	2.52244464375209
Merged-chr5-92438342-1	2.81008228972282	0	1.3421987146355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57462103-1	2.85779835926459	0	1.43332654428294	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34117713-1	1.8249692778367	0	1.39895990691826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-47739894-1	1.12194908017391	0	1.7664654653517	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-78037728-1	2.55221119834079	0	1.42823037924997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15205706-1	3.60573990184832	2.76319068849805	1.17107109684045	2.35954136000209	0.0182975410630123	0.17498479705892	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.961371261847668
Merged-chr17-43033302-1	2.91923899887479	0.143568669886476	1.09928532666199	0.130601825026108	0.89609029893288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.925723919317708	0.851599296279844
Merged-chr2-140159488-1	1.98416981864465	0	1.37685238289952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21815022-3	4.47980725216628	0	1.30602169668505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32039915-1	4.06011963764325	1.47727572282912	0.852697627644843	1.73247312404207	0.0831893582645884	0.540098540005742	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72068892744268	3.39205851293627
Merged-chr5-129965896-1	1.36674801424944	0	1.45263458467936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84755482-2	2.43328456512652	0	1.36704762149201	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73224957-1	2.1644182879586	0.445977628418722	1.53901832576379	0.289780583475113	0.771984102977172	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37077378138221	1.94822387057749
Merged-chr11-121056397-1	3.84884731995013	3.94285407699573	1.11589606723433	3.53335242659992	0.000410325093813664	0.00947794400153683	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.81960882153758
Merged-chr1-77824000-1	2.34323837257395	0	1.34787263408237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114842050-2	2.31837927890052	0	1.38059267256385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126108975-1	1.91040096333884	0	1.37524131567289	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84276418-1	2.25006436919967	0	1.40176044626688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88630194-1	2.40441196611324	0	1.37736200286606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56894492-1	1.7416231280694	0	1.40810291628314	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22031795-3	3.12165004459384	0	1.32275165266675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23057893-1	4.60958273380257	0.0448694006692339	0.817921415893293	0.0548578381704675	0.956251721534391	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12555376695617	1.56112970471021
Merged-chr19-40558652-1	3.66934359155698	0.413939430220033	0.977164759760577	0.423612728647168	0.671848270858528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24251512836817	2.49632546760905
Merged-chr5-149015989-1	3.53792818607516	0	1.30738946501562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101329932-1	2.14392441134303	0	1.36049166379899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-139948028-1	2.19702839936736	5.04647878123955	1.38326022784846	3.64824975058303	0.000264032909813383	0.00674491576413813	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.1769477674284
Merged-chr4-88115635-1	2.57566914173786	0	1.47810939235304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67398142-1	5.96586992655714	0.540493666337525	0.790877283084678	0.683410281086117	0.494347625287822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12833067002144	2.85847887719124
Merged-chr2-22866078-1	1.10373006938563	0	1.54271835647727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75688734-2	3.65750654342582	0	1.30778496127154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31697007-1	4.24828308336906	0.665901969797201	0.698691894864641	0.953069549956934	0.340554833010596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02047596808202	3.5798125855659
Merged-chr11-97440505-1	2.94377013278662	0	1.33504085460628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-109892855-2	3.48160840544323	0	1.31791857481603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82903694-1	3.36646830451796	-0.488621542377423	0.802131795599644	-0.609153689029553	0.542422573469075	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18487735449742	2.30127498244712
Merged-chr13-98968762-1	3.59476166512564	-1.32609630974965	0.951587858378942	-1.39356161186072	0.163450027581888	0.880806274073469	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44711700281375	1.26501898168246
Merged-chr11-20848502-1	1.9830763367384	0	1.38051767429799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33247328-1	3.51159542140404	0	1.33986427777794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41969834-1	4.14296742058469	-1.12138470973282	0.739975742210428	-1.51543442002986	0.129662426271225	0.748821997977858	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15796822813541	2.05066483796074
Merged-chr10-36971474-1	1.66728236743036	0	1.47402380115743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35087844-1	2.93000155651255	2.49926414126577	1.24363317128105	2.00964737752316	0.044468523105547	0.341181180093351	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr6-98525469-1	1.78910074584823	0	1.4684349113921	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118488407-2	3.06821862928024	0	1.3474875339055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44455855-2	3.27222686346316	0	1.31222774499509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137644754-2	2.14436228315844	0	1.40828653584972	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56720033-2	3.30521851061782	0	1.32152201459703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126063081-1	2.252211060767	-3.47167966500589	1.22677522813364	-2.82992318836397	0.0046559180581092	0.0616400506808937	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50192890501366	0.382164212378408
Merged-chr11-78746518-2	1.80958273334115	0	1.42987540218273	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27109362-2	4.843901408624	-0.0972250823095023	0.671715883443338	-0.144741377576348	0.884915068554622	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80449457751736	2.26292282237182
Merged-chr9-7254974-1	2.14791378957288	0	1.42120688931884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7829753-2	2.87734711234492	0	1.40341074998555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128644174-2	5.58480177425348	0.33778588135683	0.735692441238825	0.459140073245873	0.646133581246233	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.154674640496	3.21068215388718
Merged-chr9-14003385-2	3.24414049501842	0	1.37251815912359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128698720-2	2.91913702012388	0	1.31432689538404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73290811-2	3.36384821456397	-4.34692791791548	1.1494743135886	-3.78166598985984	0.000155782293403095	0.00449437074822014	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09319175294886	0
Merged-chr18-36238690-1	1.92283628561788	0	1.3902091077182	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41554460-1	2.14627688586796	0	1.39577263540219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59024841-3	3.37110585757764	0	1.32382911789181	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18664060-1	2.27772905613477	0	1.35114692666512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120501895-2	3.6838333439446	4.42746028091453	1.04265791369421	4.24632108265281	2.17309157895799e-05	0.000941039379182165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	3.59274383422387
Merged-chr13-113865990-2	3.45489107791249	0	1.32103007026318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124857547-1	2.92504408744202	-0.0210454356401183	0.955573046509496	-0.0220238899757509	0.982428898713188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35403124195488	2.3412244690151
Merged-chr18-75692169-1	2.1304889413792	-0.855131831935471	1.00048098896434	-0.854720720701217	0.392705776622479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53286748570504	1.46894927517136
Merged-chr2-14633393-1	1.62394562733812	0	2.11510706428342	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5015174-1	2.74906794310599	0	1.35284623297774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30266606-1	2.1475701816192	2.28805143453232	1.5490900541394	1.47702932338782	0.13966777710967	0.788009891470256	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	1.82374999908923
Merged-chr3-69238690-1	2.23935309161046	0	1.37896202480919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86209452-1	2.54111073818881	-0.0477767635279942	1.08436254240213	-0.044059769366578	0.964856761017443	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28638570914477	0.989878296978726
Merged-chrX-13618748-1	1.00077922535764	0	1.5294959186273	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35587112-1	1.49847257973876	0	1.54311802541273	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22630107-1	2.28378047638137	3.14841755225636	1.274007190508	2.47127141488186	0.0134633592692464	0.138525692774079	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.793480537552656
Merged-chr2-61607154-1	2.54232403597382	0	1.32619983716098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55813195-2	2.24421634392416	0	1.43897748024048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75573953-1	2.71391479312614	0.594872207326249	1.29426123205095	0.459622982281241	0.645786859959476	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12000521415173	1.52696130946871
Merged-chr2-52905325-1	2.30295666214511	0	1.42342078311946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53491378-1	2.62025127371708	-2.31209616997718	1.16358711564159	-1.98704174263937	0.0469177712471678	0.354151401168699	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4708259251272	0.890396206374751
Merged-chr14-94735828-1	2.71184135185488	3.39986841319803	1.22339330359934	2.77904775446726	0.00545185095835566	0.0696630138296263	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.765449184059329	2.55256080062263
Merged-chr5-137194570-2	7.07153290979578	0.609772114199685	0.687539245486145	0.886890629448399	0.375137787128185	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83242691942823	2.4627422823031
Merged-chr4-129774926-1	2.84996626867407	3.11396388397139	1.2160247137232	2.56077351786472	0.0104439416168665	0.114700808217774	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.50690972966086
Merged-chr18-54970055-1	1.40934670105467	0	1.48120185859417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128713883-1	5.35639113278611	0.0582738557146961	0.845972044467732	0.0688839023650726	0.945082032131853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28736529972301	1.75238521850622
Merged-chr11-8547965-1	4.4550934588877	-0.657322151680589	0.974494365935942	-0.674526374556585	0.499976723559988	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82867098549204	1.30831180799264
Merged-chr11-8486323-1	1.47973520657187	0	1.52287130429056	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57869732-1	1.93342549993522	-1.51865249110547	1.24247838851316	-1.22227678577396	0.221602974903809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48700396374153	1.38450684154311
Merged-chr14-65879983-1	1.48239890337955	0	1.57923316514036	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25258585-1	2.46232002646758	-2.90203646196343	1.16064661312805	-2.5003618062023	0.0124066526907307	0.130551550197825	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00434749899049	0.306240821987646
Merged-chr16-38543574-1	1.30589889652614	0	1.56190843651928	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70868243-1	5.24180568002859	2.26733284955397	0.789084231571432	2.87337239655475	0.00406115098107642	0.0555885990803141	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5849705282813	3.73403530842044
Merged-chr2-127501414-1	4.34073952593879	2.93470131045283	1.01458095903286	2.8925255144255	0.00382158141166243	0.0532122435385667	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.708251031414953	2.54409787166574
Merged-chr4-117267506-2	2.61419007522975	0	1.37694935297301	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9019638-1	1.98207750615414	-2.02371369647432	1.3602174336445	-1.48778691289972	0.136807098096328	0.776968245454774	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73359734575759	0.666688015277142
Merged-chr11-99963090-1	1.38523520524164	0	1.54890279580188	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48427250-1	7.25603874233404	1.01290750006523	0.690664315835301	1.46656990500545	0.142493091830844	0.799082443453289	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22511797843337	3.37353465954841
Merged-chr4-32091316-1	3.58856205579411	-0.748826960680597	1.75357547574478	-0.427028645780162	0.669358463297473	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89647311517796	1.11051826775391
Merged-chr9-123683901-1	1.96925696782584	0	1.35819459055221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94891328-1	2.09213231184361	0	1.42358054728314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55028214-1	2.32239560788962	0	1.36807509722786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39917664-1	2.59584954401484	0	1.39202386034915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-42964528-1	2.6076308441408	-0.711433209196565	1.32546874924862	-0.536740839495358	0.591446641889379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10750274980059	0.733321818366247
Merged-chr7-66354649-1	2.70020389040135	0.0998055530141158	1.36463919260069	0.0731369533831939	0.94169713583763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr16-65205060-1	2.33953369258546	0	1.45656484130319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-50935278-1	2.39466322995268	3.878315705765	1.46542427673459	2.64654801161549	0.00813179608858771	0.094166285168324	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.39665735086605
Merged-chr1-57989465-1	1.24808471243345	0	1.63683095780209	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37545051-1	3.01828477857538	0	1.34058312447138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40835264-2	5.13559622590208	-1.22886923413668	0.75424567090518	-1.62926919111368	0.103256045209394	0.636687893439036	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17975273716624	1.88639437725876
Merged-chr11-97083111-2	4.0835000228018	0	1.35002494959782	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-8412467-1	2.57393717933913	0	1.37157962333277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110963501-1	2.36250919627832	0	1.37442612625668	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9646837-1	5.04745571230858	0.285925115317691	0.812362874751051	0.351967235584607	0.724862834422562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75380193809638	2.22528317833176
Merged-chr9-56121287-2	2.41664759052943	0	1.34442453959837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36742118-1	1.53336511211529	0	1.42919815382064	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-126498889-1	1.18946369281803	0	1.50619812572013	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102795205-1	2.08787736461139	0	1.38376968338479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3628972-1	3.13522738804906	0.687406642682941	1.40653434291805	0.488723681824094	0.625037335381505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	1.29606516661881
Merged-chr2-181392825-1	3.90448554984617	0	1.33648642985801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3451423-1	1.74391507980867	0	1.39160493125367	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3781333-1	4.02399546303217	0.868079178676921	0.848351050291231	1.02325467550128	0.306187447677738	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27706494109986	2.1552264446993
Merged-chr1-149965899-1	1.62602017888811	0	1.49807096310296	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113471023-1	1.95634364146707	0	1.47496017709866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88149613-1	2.58423635449753	0	1.38633271749451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108761794-3	7.37446533665102	-0.534190723144293	0.624824787548173	-0.854944832199231	0.392581689639423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23329246159626	2.28742912540774
Merged-chr3-88610775-1	1.7427288401841	-0.765716068778104	1.52470196482606	-0.502207045339158	0.61552188758397	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0
Merged-chr4-115903046-1	2.99215910725927	0	1.33426958244316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24902075-1	3.07716737104057	-0.0208627462658846	1.16249463646638	-0.0179465312023295	0.985681508449631	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01488556865802	2.38327122822273
Merged-chr17-27569991-1	1.55151007878008	0	1.4114167515964	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149802387-1	2.76153625199975	-2.46273929770654	1.1887482556268	-2.0717080223247	0.0382926787438907	0.306250324063888	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35310731920417	0
Merged-chr12-52618856-1	2.03254024302584	2.68607424393079	1.36571266768602	1.96679309454009	0.0492070690156753	0.366528871363085	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.0023426291647
Merged-chr10-57584151-1	1.91225955418972	0	1.45687400047081	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63847304-1	2.50650695780406	-1.44324347029265	1.27073445042878	-1.13575536557277	0.256058962033957	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44876555335066	0.469435083901436
Merged-chr9-73091858-1	4.24742131231298	2.05595053206607	0.900024583309097	2.28432708416365	0.0223523153025848	0.204484725712265	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	2.84793875274919
Merged-chr4-95441073-1	1.89538265696178	0	1.37603872032823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9674819-1	3.0811429926948	-0.654495584127751	1.02933617486482	-0.635842400286478	0.524879148427871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45056995984906	0.683637474991079
Merged-chr2-173361809-1	1.05865779204866	0	1.57417543271589	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48818018-1	1.82516055260013	0	1.46479060606683	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99257901-2	6.22092305204487	2.59464228474938	0.633214205431288	4.09757434766036	4.1750209355332e-05	0.00158524647329083	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07376348816621	3.88464534392095
Merged-chr19-55935971-1	1.92103788722118	0	1.36833167378466	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155481982-2	3.30223079831971	0	1.35947561852378	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85897723-2	3.97652095685687	0	1.34316001189445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45386917-2	2.80206944081106	0	1.34761544887332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145111167-1	11.264334290109	1.47195239710405	0.529470408063807	2.78004657991511	0.00543511017706364	0.0695170698043454	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72711313688623	4.48584948582594
Merged-chr14-64070882-3	3.12785372202513	0	1.34564289744805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163968758-1	5.49402606315491	-1.16230405074007	0.659745347555527	-1.76174649059158	0.0781121391381117	0.516369837543657	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35110230089325	1.96407117436956
Merged-chr11-94870491-1	1.35102410948418	0	1.52239269926773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46756056-2	3.00223252671724	0	1.36592444080411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3663617-2	2.50748466191358	0	1.34198243766644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115862994-1	3.88646455150762	1.3026451889775	1.35480961883718	0.961496855990399	0.336302405552265	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr15-39975078-2	2.14411410698981	0	1.40841089772365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-94515498-1	2.19863192375182	0	1.4151639719615	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75846457-2	3.03371900058702	0	1.34891858327228	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32828505-1	6.96838079254004	0.603630850566233	0.583314169069518	1.03482974111382	0.300748430865485	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98024573085568	2.84105562478759
Merged-chr10-127655476-3	3.38802176072996	0	1.31693833230614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90744624-1	2.09403254329775	0	1.386813318955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50110742-1	5.59752516241073	-1.86463346859929	0.962284165805655	-1.93771604569442	0.0526578752244523	0.38485421255084	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56996235349426	0.581381506691384
Merged-chr18-80280606-2	3.10097851650223	0	1.32317408320347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84536056-1	2.2579051534664	0	1.38099906759886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113366150-2	7.36234614006076	-0.117847571117802	0.636866605585092	-0.185042786172678	0.853195476503191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.62301627633138	2.90278323602149
Merged-chr18-56566108-2	7.38518074571129	-0.334732703950689	0.647156936926328	-0.517235750481951	0.60499159850819	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19677136614703	2.11736049306998
Merged-chr15-85331823-3	3.7120047396498	0	1.31558434960846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27401741-1	2.49151404492968	0	1.36946299362832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-35839601-2	3.23607913468196	0	1.33002518116222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20768568-2	5.98980645918668	-0.495173884378095	0.760327682591507	-0.651263784964846	0.514876221806147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27185282693831	2.27874693941374
Merged-chrX-99197783-2	2.98311147640925	0	1.36353608630331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-79508036-1	2.27359191608004	0	1.34203202986008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-81996339-3	3.72283921676338	0	1.32102418994546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121241964-1	3.5969364309882	-4.26477440874088	1.09380208150807	-3.89903665465774	9.65761555237027e-05	0.00307696999456454	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71344085604121	0
Merged-chr17-48424962-2	5.3406004939177	1.51134991325192	1.44594418266875	1.0452339249102	0.295914867646362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49041422311804	3.2411634522919
Merged-chr11-96407916-1	1.98200731231613	0	1.38630642870608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167049819-2	3.76869914583996	-1.92383092390719	0.903262784179321	-2.12986846973346	0.0331824739037281	0.276433189662547	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85828131249437	1.33962963608869
Merged-chr6-108505563-1	2.37837211398957	0	1.39638876401587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10744031-3	3.40322434658776	0	1.33010869986848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-83056599-1	4.19370377729283	-0.484702303440246	0.819636162931106	-0.591362759918864	0.554277386758359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34169641385379	1.89200393807192
Merged-chr13-75786952-1	3.94712712532171	1.67038736587649	0.849787560000751	1.96565288138016	0.0493387211225901	0.367124581015346	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37482376799783	2.78213226264952
Merged-chrX-23321164-2	2.3129417990072	0	1.3622313260438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120101252-1	2.26040723344052	0	1.38127517967111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-36561854-1	1.62374267872517	0	1.40003475066228	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36244014-1	2.29564597767934	0	1.37777248918237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-31863226-1	4.81963064305152	-1.6130327880546	0.924440619913015	-1.74487441735995	0.0810067313958667	0.529823428064689	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63073677248672	1.29358708977899
Merged-chr10-87721137-1	4.74145036903959	-0.275756692226093	0.836453153683006	-0.329673803023998	0.741646450257124	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27581241927236	1.64254215594465
Merged-chr19-45333177-1	3.6296961171655	1.23074888244901	0.789877546293297	1.55815149857673	0.11919733923429	0.70694040021818	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39524630788955	2.17428146954453
Merged-chr12-55020343-1	3.70445548239167	2.33417665897378	0.902643579556499	2.5859339298914	0.00971155442428381	0.108536530220277	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28340682050196	3.45708220433195
Merged-chr7-145001698-1	3.04625081624402	1.76177417451771	0.792650369909035	2.22263716942426	0.0262402757375134	0.230873442620648	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35116039610194	2.60516207451923
Merged-chrX-53693401-1	2.37805674948555	0	1.37569895164728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26714891-1	1.97240492051221	0	1.43180382500129	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16384123-1	1.0379205874779	0	1.95093871979389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111597568-1	1.82410715440228	0	1.41681729729949	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102893135-1	2.35325560448988	0	1.36084683599629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106378634-1	3.61055409294913	-1.32991606256129	0.976081010465481	-1.36250582513338	0.173038307060889	0.918452822214107	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16033506605846	1.41695929335733
Merged-chr3-9782603-1	1.04814832050085	0	1.61953218386107	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95363992-1	3.52075433190243	-0.432036931358065	1.30808314459982	-0.330282469536933	0.741186537704553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37817212493344	1.40918939303534
Merged-chr11-49695211-1	1.3774077361432	0	1.59232998243303	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103112430-1	1.24505410862655	0	1.42667208871557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35131314-1	1.53444847815909	2.46505305133802	1.65915260068541	1.48573015545387	0.137350510953589	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr3-96052165-1	3.1087842176099	0	1.40611941230094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27727123-1	2.4206385313891	0	1.37516788976634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127945549-1	1.87726755211435	0	1.38575676016498	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57217669-1	1.51418270262582	0	1.50589762227681	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104371293-1	2.8854882333584	0	1.32666616767394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156003322-1	3.27810160477486	1.44595579278256	1.02595669820295	1.40937312005007	0.158724867961273	0.863185354676874	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974761006698163	1.99468681090207
Merged-chr1-161259482-1	2.63400409527163	2.57082491534746	1.42092637393287	1.80925976356669	0.0704106568384295	0.477733857518847	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr16-51640964-1	2.98505689310332	2.51124702220652	1.88675988485013	1.33098389592165	0.183194309895859	0.956481130949667	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	2.46890512470268
Merged-chr8-94493032-1	3.57110004545925	-0.771480594689979	1.23217490420991	-0.626112893594977	0.531240895732863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0319228300003	1.31734301959449
Merged-chrX-36103790-1	2.06136724318398	0	1.48395291427285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77704916-1	4.52650022966465	-0.792589267281893	0.949065723898384	-0.835125795109586	0.40364688437036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77201214415624	1.15637648126681
Merged-chr12-83502431-1	1.67754856097472	0	1.42038178346497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121387559-1	2.20894116756118	0.335751931882217	1.4358011082349	0.233842925706454	0.815106923394676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53970804602199	1.64143129445672
Merged-chr3-116414662-1	1.1517041962492	0	1.75074948115472	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96236226-1	2.52834718856991	0	1.36682821430003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167783630-1	1.76947526453257	0	1.53406857221442	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116211842-1	1.9697151976889	0	1.40831774219039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5333137-1	2.76857901280401	2.63580013307083	1.15329444249122	2.2854529042707	0.0222862849343794	0.203970436421249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	1.47158896970822
Merged-chr14-46101035-1	3.2965084432219	-0.939839335709336	0.873528864968885	-1.07591102412261	0.28196705110378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06662460394957	1.61691174577224
Merged-chr2-159607778-1	2.29575150840187	0	1.40965383532103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124028041-1	6.59154582138442	-0.053791021917706	0.662601186805404	-0.0811815960925883	0.935297535392243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36787803288047	1.91157833022862
Merged-chr5-99469551-1	1.66085302523199	3.18990741802593	1.56494764681777	2.0383476881878	0.0415151738756858	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	2.100976607917
Merged-chr12-54835764-1	3.66915844589274	-2.45297563255182	1.09861148251615	-2.23279628111457	0.0255623816454249	0.226341380894571	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5391866398384	0.563523181795778
Merged-chr4-66530883-1	2.15045879416451	4.36937582858206	2.31403093834169	1.88820977117674	0.0589977945757231	0.418693225834646	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.41736426458231
Merged-chr1-107566627-1	1.5431989197415	0	1.5285485535346	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49843513-1	1.63769107478717	0	1.52940867343497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22625003-1	2.22799514560658	0	1.45455829893545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114916068-1	2.04870599120784	0	1.37319674707118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41334055-1	4.16224205493156	-1.32937789687023	0.841773381126089	-1.57925865402377	0.114276741275832	0.685031459078112	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64706956510951	0.735627456805112
Merged-chr1-52858385-1	4.42264660861153	0.86879681040592	0.878994090311933	0.988398920972957	0.322957315763839	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34527005257115	1.57928534738074
Merged-chr14-66194460-1	1.81967738995838	0	1.4219152868432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155047014-2	3.59707693056383	1.96276448976625	1.37427187283402	1.42822139386338	0.153228144677235	0.842348416226223	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr5-99332241-1	2.1914917305204	0	1.37634910705263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92410774-1	3.07965224566343	0	1.33631616542635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118585987-1	1.95266398190669	0	1.48525316688845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36511505-1	2.27338344285122	1.45282682832722	1.18907126663976	1.22181644539509	0.221777048096132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.34591112769102
Merged-chr9-45462841-1	1.51855608050444	2.07330909993512	2.24065497620958	0.92531385775531	0.354802672451424	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr16-36067604-1	2.44022796811475	0	1.38658557131275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43845798-2	8.24375951741694	0.538226331095515	0.591369474455595	0.910135464112342	0.362751073653833	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99685875992355	3.23925211617863
Merged-chr16-28912357-2	6.33391104839895	-0.664758009477651	0.800125878626198	-0.830816784252784	0.406077139404032	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08013060953843	2.83995505205827
Merged-chr15-57881003-2	3.42593425010137	0	1.40652198523118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119667574-1	2.27204006147487	0	1.33416160293107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50374819-2	5.61366950337791	-0.325249307300322	0.900618855142414	-0.361139793424479	0.717994946898832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76284108739117	1.65215194967867
Merged-chr2-142889914-2	1.85391694677557	0	1.39068033263753	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120300984-2	3.02060114233012	0	1.34811359138568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-49103476-1	3.23227478404476	0	1.33054413195772	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-155171905-1	1.82616597569198	0	1.40255342036239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106098532-1	2.57517407246859	0	1.32835795896021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60761701-2	3.33748103399104	1.06188254152303	0.977322536466134	1.08652210698287	0.277248065711246	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23453716437347	3.35635186263844
Merged-chr10-127595476-1	3.23864300608338	0	1.34813963456736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90059527-1	2.52500221010973	0	1.415785156832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57026055-2	4.37068009517118	0.125620972951702	0.829930314933345	0.151363277966044	0.87968915559792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23873715914918	2.09304857822224
Merged-chr8-105546652-1	2.59016665645913	0	1.33993675596745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96624651-2	2.95597341188464	0	1.48967760745653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39470589-1	1.35648413976752	0	1.51229811960452	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20049810-4	6.87520582830549	-0.303578432688268	0.648391253413438	-0.468202541428632	0.639639754919131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21378793001778	1.89082683942207
Merged-chr3-90117875-3	2.51991561946078	0	1.33791250045087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89379325-1	2.4409943898725	3.57871100049652	1.24416923288636	2.87638603005334	0.00402257430206895	0.0552154424823689	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26428495695095
Merged-chr6-128630646-1	3.60279557197913	0.768687092574764	1.32091538484507	0.581935149967933	0.560610363172561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.306240821987646
Merged-chr2-117361174-2	4.73903736484265	-4.30919505524102	1.08723801010993	-3.96343304333641	7.38795913838728e-05	0.00249366517488148	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05139590347038	0
Merged-chr7-91675631-1	2.71551810936416	-0.228789754479303	1.3028021604787	-0.175613582337964	0.860597531029236	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00967833035899	0.683637474991079
Merged-chr11-23763625-1	2.05550281569076	0	1.3820126138677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101539568-1	1.70230159421481	0	1.52182441247103	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24734961-1	3.19366866572402	-0.513644907170343	0.953261994688244	-0.538828685117491	0.590005068678922	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.104866965772	1.89082683942207
Merged-chr10-117810002-1	1.14364046563485	0	1.56927142770166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93940550-1	6.86099992944863	0.507780133975268	0.728907393301897	0.696631888551797	0.486033194091701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80206924239887	3.50058657781377
Merged-chr12-40508051-1	1.31833187383443	0	1.53267386427364	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82789378-1	1.91948333988413	-2.47774517975874	1.29800661547658	-1.90888486253901	0.0562769461949528	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25462200461429	0.688405034366054
Merged-chr7-122453989-1	1.40780927074224	0	1.65539896771358	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27709133-1	3.43431413337389	0	1.31650910745785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32057292-2	5.51656613165957	-0.393489067805839	0.699666042828145	-0.56239554833232	0.57384655142906	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34124621803087	1.82361065065357
Merged-chr7-28467576-1	1.97853728804148	0	1.34526980061955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31941749-1	1.94828398204972	3.28230213011845	1.25760619855582	2.60996020366923	0.0090552756261906	0.102801605467174	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26501898168246
Merged-chr4-77923070-1	3.31115435210806	0.347507915325334	1.03033710864927	0.337275938533267	0.735908896422483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99290681930315	1.82166021832917
Merged-chr9-32906492-1	3.30292196704887	0.790450173937931	1.1152285749351	0.708778623237777	0.478461865340546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.921214647921698	0.793480537552656
Merged-chr5-140763421-1	1.81748643049308	0	1.4078253327334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7911164-1	1.3792599660104	0	1.51073103618006	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104039743-1	2.11912515930627	0	1.37108743144927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90413462-1	1.8540624559624	0	1.3818255535031	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121404825-1	1.00041486421628	0	1.5449204938591	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137160056-1	1.41301852241864	-0.955031501039625	1.78492920622139	-0.535052873643868	0.592613296105764	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	0.306240821987646
Merged-chr12-57281622-1	1.17523373092479	0	1.54375072862653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64683574-1	1.45696080653757	0	1.39721202753377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75217984-1	2.56936540120104	0	1.35367033319716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103722748-2	3.045564904022	0	1.33435953763004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139313615-1	2.04253876784674	0	1.37610871270611	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-52107235-1	5.46671223633732	-1.44803364168783	0.758738341288005	-1.90847564027106	0.0563297686806532	0.404897708085575	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02992224851653	1.37038362634479
Merged-chr7-127760324-1	2.34366539550115	0	1.41347819987722	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23237894-1	2.49149746466289	0	1.32597370433553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141419231-1	1.67615967581222	0	1.43420946892772	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24882188-1	1.68413846889765	0	1.52441017960033	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145337292-1	3.91485266070295	2.03603974062863	0.956266843477359	2.12915438249934	0.0332414896560625	0.27685424204245	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51958224843084	2.86128175887696
Merged-chr19-56254794-1	3.04077648075874	0	1.3497466770308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19153837-1	2.08386204125581	0	1.4105508109148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99303100-1	2.19683923214382	0	1.39767668187281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53534169-1	1.60394777190467	0	1.61286482852961	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-38750084-1	2.21279056241992	2.66821913093052	1.25188054064338	2.13136880421453	0.0330587707912193	0.275975936490169	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.880460860551173	2.22030092573404
Merged-chr4-129036659-2	3.11291721350879	0	1.3836175436135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121423581-1	5.28589006380744	0.989323202440677	0.756880092941729	1.30710691385147	0.191176403500417	0.985921652840206	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49589574796774	2.99307967075751
Merged-chr8-83138969-1	3.67048056102418	-1.08595821796941	1.05155789769519	-1.03271367211413	0.301737913376648	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74884577480978	1.90990595114556
Merged-chr2-129378384-1	2.19153478360677	0.324141476189514	0.932997826304264	0.347419326230892	0.72827631627087	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67780579218735	2.42763579811059
Merged-chr3-135674831-1	2.20686200080879	0	1.59051019114548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25197441-1	3.04108541059872	-1.55663424627841	1.20516849434016	-1.29163204447249	0.19648460125501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.848621293923477	0
Merged-chr9-95688299-1	3.34265545688046	0	1.35471959242766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68442935-1	1.84408585784573	0	1.34973091545097	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4405555-1	1.02670632178083	0	1.5097441068095	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59919635-1	1.55363054831236	0	1.45544724840964	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75282335-1	1.45941202814773	0	1.40868354738949	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84794588-1	1.96237684373381	0	1.49755095829531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-40144364-1	1.6479973730299	0	1.41810753255922	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31505015-1	4.19095805939406	-0.596933530168603	0.847602679144969	-0.704261023302531	0.481270234532604	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40138049520309	1.56485155503272
Merged-chr7-71873419-1	3.92155944268053	-0.220728783174098	0.783897214851809	-0.28157873123178	0.778266550590941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88627453110954	2.31193049927473
Merged-chr13-20103393-1	3.9334123659752	-2.57828848859822	1.24615688388641	-2.068991891741	0.0385468475792133	0.307818929721529	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05459275394906	0.666688015277142
Merged-chr17-47526795-1	1.51017641975803	0	1.43673087637483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171193078-1	3.08757037470819	-0.829000775077011	1.08774025692968	-0.762131188760997	0.445981709933073	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55285715320787	0.581381506691384
Merged-chr13-117997273-1	3.28803609617341	2.07476390722786	1.09905197853416	1.88777596305776	0.0590560334135321	0.418918319522435	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15907657994676	1.84568063312508
Merged-chr10-7846088-1	2.02006626378134	0	1.43170284359413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23757126-1	3.94621944879462	3.09479467418749	1.23889711713422	2.49802395322888	0.012488775481158	0.131141173484132	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.55707181745548
Merged-chr19-29418694-1	1.79249642490334	0	1.41859423190809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-140976932-1	2.5961582795862	0	1.355094146426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-112287485-1	1.72213292342004	-3.78175414751919	1.67024415150039	-2.26419242008543	0.0235622825882253	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.947627798528	0
Merged-chr19-46609303-1	3.04159906293501	-3.57810196559466	1.17619442450241	-3.04210077097448	0.00234933229799089	0.0367008052461183	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63277806523367	0.306240821987646
Merged-chr7-135768430-1	3.67419865192606	0	1.32155932999323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-56000440-1	2.10522424047817	0	1.45071131845581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142400249-1	2.46668390719404	0.0985349180063209	1.42780751929489	0.0690113454893287	0.944980588637248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr14-51242964-1	2.45167638703067	3.49625071838204	1.19486244274166	2.92606964058536	0.00343274084903538	0.0490843865804072	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.34805514843284
Merged-chr16-20803373-1	1.24113624707825	0	1.51933892740055	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5073818-1	2.05086837154749	0	1.3995630893581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91068035-1	1.72748367774566	0	1.49656677321646	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-43327307-1	2.21687362534485	0	1.41632923005911	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125564720-1	2.746993489692	0.456083613696355	1.37666700070375	0.331295522783074	0.740421272845436	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45171278503337	1.90990595114556
Merged-chr12-112562746-1	2.83470102076653	0	1.32059732703174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99154713-1	1.05551722498966	0	1.58227888601652	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152615732-1	2.42733727911831	0	1.33837887067726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20257327-1	1.81327724184635	0	1.48213769724306	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31135465-1	3.01297130183998	0	1.33422824926147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-60919831-1	2.7578818338193	2.75972758566613	1.39966383518165	1.97170743166909	0.0486430147850045	0.363690038401889	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	2.88970570680704
Merged-chr7-125541595-1	4.14850544013788	-1.08330953925584	0.915666553680608	-1.18308300647367	0.236776251988626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32859365082835	1.20539659680455
Merged-chr15-31648157-1	1.75805054422904	0	1.46750571452379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44422842-1	3.95789231130509	0.928112215693643	1.00131912668119	0.926889530982805	0.35398389332184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73525065375905	2.34943197691497
Merged-chr4-107084410-1	2.04911490682084	0	1.43222605972062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127738960-1	2.31611340109381	0.5806066097029	1.39649692068088	0.415759319698188	0.677586129313616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	1.20539659680455
Merged-chr13-34643147-2	2.45134424034983	0	1.3611513690401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102102035-2	2.93365251444328	0	1.33911747522167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-98041873-3	2.91674090146443	0	1.35240536458431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6258174-2	6.02093281321467	0.468735725205079	0.622890780783676	0.752516716679207	0.451740380777858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7218283799043	2.92269452602859
Merged-chr8-61578571-1	5.5838227132945	0.643287336009002	0.701672787242994	0.916791056607169	0.359252139986389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02130275464548	2.6960750002622
Merged-chr9-99376786-3	8.2063279564804	1.22650280535517	0.635410034884469	1.93025406905664	0.0535753650832795	0.389890109797255	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49558979055174	3.79480127480766
Merged-chr11-79461225-2	5.91341960630927	-0.71803199271427	0.610992461170067	-1.17518961091471	0.239918865707278	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16714143961641	2.16286647593625
Merged-chr19-5812212-2	3.01222985322148	0	1.3416494074359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-89135581-2	1.98918375732504	0	1.44106718732214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133154226-1	5.79538629658272	2.13812694406439	0.674747780426027	3.16877951449415	0.00153080475147546	0.0263744886180027	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51334561775699	3.61614301958518
Merged-chr17-47260753-2	2.11938367591076	-3.42988532189008	1.22435277873885	-2.80138648063758	0.00508835397714922	0.066077817764466	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94881534613509	0
Merged-chr3-137820947-1	3.76997549380326	-0.145775806387956	0.999481782486142	-0.145851389132225	0.884038706962166	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36394532586931	0.666688015277142
Merged-chr12-30257812-2	4.07701219472156	-0.744554239087927	0.760821113515312	-0.978619317815425	0.327768110658913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73172367675103	1.87744667331019
Merged-chr5-105062124-1	3.2331103926676	-1.72014909111713	0.764062708430692	-2.25131925971122	0.0243653238162095	0.218391979966303	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.76375960417283	1.52944205045577
Merged-chr3-157884244-2	2.09819754244191	0	1.42807610974586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165969648-2	2.91333183853523	0	1.3164403268451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75599194-2	3.69389935200089	-0.186139306260998	1.19454007187403	-0.155825083346913	0.876170898482541	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.842787970578192	0.61242769162773
Merged-chr11-74546379-1	5.94714779252146	0.532003891142406	0.63313207911096	0.840273157363062	0.400755248140205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.49834680146506	2.7312500299248
Merged-chr4-33148056-1	2.74278978819529	0	1.3274653921242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125596399-1	2.19009809365648	0	1.3371093181732	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142877497-3	3.91542970867442	0	1.31434833097651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93191165-1	3.83936981570592	1.36254523323127	1.05697689715752	1.28909651374169	0.197364535422037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	1.34574950999398
Merged-chr11-111282501-2	3.14654881881672	4.34239715325051	1.02875413281688	4.22102523307525	2.43193709190885e-05	0.00102859133467881	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.21043983090998
Merged-chr10-42636985-2	2.46203692524065	0	1.3451333897098	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71209874-2	4.37319632121963	1.39721344440704	0.926211290004828	1.50852560261898	0.131420059080938	0.75609924112546	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14980309904919	3.20023722099316
Merged-chr1-94532955-1	1.42071929036001	0	1.53946775095364	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104574278-1	2.21217468144561	0	1.45662842373488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130709649-1	2.07301975699404	0	1.49980906522106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148499732-1	2.76256181747726	2.28666630211053	1.36048789207033	1.68076931477191	0.0928077310546064	0.58578325060314	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr8-124923262-1	2.60722183886314	-1.26593669586635	1.32041942655528	-0.958738314816328	0.337690591350521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56965926015624	0.905469781553611
Merged-chr16-92412171-2	3.46618665256013	0	1.33360280952904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25444374-1	1.90613701166576	0	1.48160951418665	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74764331-2	2.54963847850789	0	1.37569063423512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84071944-1	8.51451132135421	1.54422321760618	0.581648550365739	2.6549077043778	0.00793301104439005	0.0924432062995966	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43887072474008	3.82054540311108
Merged-chr2-73206171-1	1.99557064562859	0	1.34474140497497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117263989-1	2.35334888812608	0	1.34880885539826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46072237-1	1.69249233182273	0	1.41260001385398	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171257381-1	5.64845351675073	-0.580923759063546	0.749225350690265	-0.775365860923337	0.43812350201781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24655482913663	2.37475311282297
Merged-chr5-24208155-1	3.67631739944217	0.355761035407812	1.35109253702438	0.263313596706953	0.792308880711781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	0.469435083901436
Merged-chr6-121179211-2	2.7836772919232	0	1.33916837405368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59243229-1	2.28872322410466	2.87627287643751	1.35930043183354	2.11599496996977	0.0343452353764163	0.283266912900075	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	1.65288709737369
Merged-chr7-44300136-1	1.46793051571468	0	1.62818110837557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55257150-1	3.59311954705921	-2.36812163990523	0.884511775141986	-2.67732064903838	0.00742135733592526	0.0878543508103935	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22274897939468	0.666688015277142
Merged-chr2-29670366-2	2.70986725102255	0	1.34885427386145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35727104-1	4.00418731821295	0.792729622320525	0.993817730822261	0.797660977194118	0.425067254946138	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55134248791434	2.70275322934241
Merged-chr11-49829631-1	2.05339968751213	0	1.452742058833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86263662-1	2.49458316406465	0	1.36838035561474	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115346354-1	1.90612729600804	0	1.3808311703413	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13168936-1	2.01659769002162	2.18381676083541	1.37325901558989	1.59024389138806	0.11177984052668	0.674643526282111	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	1.775524153257
Merged-chr6-16828520-1	1.82686961985776	0	1.46874768652239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44498297-1	2.52627498358469	-2.1973218402544	1.24939968220414	-1.75870209633637	0.07862812115065	0.518993253001048	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44212775510677	0.306240821987646
Merged-chr3-149291488-1	1.45378975314557	0	1.48173664541385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22046140-1	1.81452714225673	0	1.38343744147049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28800841-1	5.21899889263573	2.8854721479811	0.962128928734868	2.99904936002214	0.00270823427337302	0.0410418081697201	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.856023420615499	2.71981624271829
Merged-chr8-3313591-1	5.35544289968984	1.02117306372249	0.743401185409082	1.37365003414752	0.16955035577739	0.904296241318096	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64072567981121	2.37475311282297
Merged-chr16-43458804-1	1.29933985703325	0	1.91866931958704	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-55040590-1	2.03728502831616	0	1.38797116991446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-62691374-1	1.7477562087278	0	1.40758153445725	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184700905-1	1.16897870075508	0	1.66118548312684	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132571343-1	1.99935424841961	0	1.38647697300453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124079960-1	3.0265184040452	0	1.38100948629723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76442213-1	0.922992396107351	0	1.90356762919444	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109415624-1	3.73600762639848	1.65263966877135	1.17542653445279	1.40599145955193	0.159726660827587	0.867045886230229	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40944949155267	2.77513915217697
Merged-chr9-89066992-1	2.43856892089872	4.08302594468531	1.16485812946056	3.50517015027069	0.000456315551351385	0.0102829304214003	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.91601014191884
Merged-chr17-13877554-1	1.64441726399635	0	1.40278394512486	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143996187-1	2.39597561440199	0	1.40285535415558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-74001307-1	1.3212923458652	0	1.52258332909542	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132791410-1	1.48305318169628	0	1.58333955643596	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108283010-1	5.22053731711789	0.194417173992176	0.794674017735607	0.244650220912168	0.80672727474777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19726578927323	1.85989208496043
Merged-chr5-64626547-1	6.44229118225506	2.021077313401	0.714506746599134	2.82863293176839	0.00467472824072171	0.0618370023518625	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45149828285893	3.6597719732411
Merged-chr19-56599021-1	1.41136169945367	0	1.43561948154243	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153807657-1	2.93523030078951	0	1.35680408588628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52924060-1	1.67081685227909	-1.81474263770284	1.53652323924537	-1.18107073902384	0.237574622905506	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	0
Merged-chrX-50619779-1	0.861656611787097	0	1.68544855815117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131905977-1	2.25755503406993	0	1.39560276690976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90922826-1	1.63052258143001	0	1.68925092930808	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142385461-1	1.99043097934052	0	1.37552697390866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-4610059-1	2.9229841223403	-1.31497442961146	1.47461979767994	-0.891737946066063	0.372533409405698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25461080376897	0.581381506691384
Merged-chr10-98796987-1	2.01230805010402	0	1.39133480398243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-176248284-1	1.62053983657345	0.221600578284915	1.38376689808028	0.160142997055605	0.872768431474129	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0.306240821987646
Merged-chr7-81295445-1	1.26376813951277	0	1.43371311343284	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70470390-1	1.73065715457493	0	1.37895983362359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64979837-2	4.01908974198533	-3.93956300297005	1.25274979300561	-3.1447325116041	0.00166238751347743	0.0280698642004382	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52457029885472	0
Merged-chr11-32231320-1	1.85275350094628	0.0970400335982205	1.27884066414129	0.0758812542635092	0.939513570785412	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03855222268227	0.733321818366247
Merged-chr4-140789166-1	3.99215084913042	1.97254649346492	1.01547496400253	1.94248658350971	0.0520782225773025	0.38187881843828	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.942222610012176	2.68297728031423
Merged-chr2-137019819-1	1.38615185612539	0	1.49721224660412	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131712558-2	10.065657893072	0.615063054535033	0.57640410728916	1.06706917379143	0.285940600627773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47954432929075	3.97892346624957
Merged-chr14-77833361-2	4.70751701237651	0.742970722493854	1.09331938182316	0.679555064006017	0.496786230681491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58941359736359	1.58787129527193
Merged-chr18-32473248-1	1.84197223174485	0	1.39735876685495	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139015300-1	2.02289121587348	0	1.42568901590074	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109585195-1	2.05251777025579	0	1.41414490048513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60635769-1	4.09122993372823	3.78960469388135	1.11803378388219	3.38952610244259	0.000700135429619815	0.0143017651751078	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	3.12736629702302
Merged-chr8-122911714-3	3.15374828178329	0	1.34808144308177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55067387-2	4.58929271979657	1.06451805952129	0.78238134975513	1.36061277515686	0.173636092243195	0.920751771786404	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45670729714848	2.24287124256397
Merged-chr9-46218344-1	2.2621928651328	0	1.45032213406648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97243161-1	2.69287097151267	0	1.3401248914492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141762406-1	3.98666351343159	2.15148052001101	0.959224725396519	2.24293688751783	0.0249008846283799	0.222200355991549	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.909848584116111	2.15961505864417
Merged-chr7-122347582-1	2.52251814316905	0	1.34719074575791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17286591-1	2.5656763258053	0	1.36131362548774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45769939-2	5.07243697288779	-0.965627011463088	0.713319722533369	-1.35370855586839	0.175829377417172	0.928989852579439	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96990815691511	2.14625477824554
Merged-chr2-103495811-2	3.92323791690663	1.01510122849714	0.859256809135868	1.18137117763198	0.237455302708979	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44029090082774	2.08364730863447
Merged-chr10-67247361-1	2.9742163748279	0	1.34972199225262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128579352-1	4.1826527102585	-3.90247891419578	1.08847484763204	-3.58527247798658	0.00033672645514943	0.00818155220004712	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74276657900433	0
Merged-chr11-69269815-2	2.05321286944225	0	1.45104560352234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114953527-2	6.18007826640129	0.329528862650279	0.894081746465712	0.368566816124924	0.712450633702679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29263536841228	1.64143129445672
Merged-chr9-63918438-1	2.30475216809632	0	1.35325118529931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-145253714-1	6.72208992333768	1.05823555937677	0.703352346341154	1.50455964906028	0.132437326933822	0.76033877064278	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33642841005629	3.6152272148897
Merged-chr16-95886358-2	1.78649478078284	0	1.47513116374818	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118849123-1	2.08437827915628	0	1.43541644431264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88469074-2	5.79811480076974	1.83642940162349	0.836422777298411	2.1955755527785	0.0281223376624726	0.243659808657111	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.932670330750678	4.03929583948814
Merged-chr10-80939390-2	4.84637374665589	0	1.33511800507044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23827263-1	2.52190835928437	0	1.3474719275043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-114863419-1	1.91247451090434	0	1.39637495624199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102239374-2	2.91940030390022	0	1.31852405193441	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84826584-2	5.11158034216986	-2.00957281887028	0.944294735696898	-2.12812032398677	0.0333271086333532	0.277327208093156	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42649543046478	0.73596151290311
Merged-chr6-134434235-1	3.53026248374131	-1.44694291238962	1.24342231180934	-1.16367777757191	0.24455461843681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03576903979052	0.306240821987646
Merged-chr19-3581633-2	5.15937116502081	1.53035947400369	1.01717571509813	1.50451829638505	0.132447965939238	0.76033877064278	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	1.34805514843284
Merged-chr19-32788916-1	8.14669242483721	0.612183820598738	0.475172693496885	1.28833964783111	0.197627757379858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18906056504692	3.78600629199586
Merged-chr7-118797799-3	5.27920956526408	-0.960287880951263	0.841746000240834	-1.1408285642896	0.25394127134981	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12995660669219	1.07982873328226
Merged-chr3-8778900-2	2.27371111000401	0	1.3865520643056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5008158-2	2.1793005946673	0	1.42519006483434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102352212-1	4.40810418124769	2.61582314255812	0.982855643588163	2.66145202464158	0.00778044277056403	0.09100068252824	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694210007132702	3.37265460597716
Merged-chr17-8214140-1	1.51486889998338	0	1.50922120370475	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129112711-1	4.39557036239561	-0.979835230205487	0.88973925743207	-1.10126109646263	0.270783037753181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21959557567717	1.41695929335733
Merged-chr19-34726479-1	1.8035552744866	0	1.40982050071907	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94991804-1	1.07175000317197	0	1.46513241037611	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77694395-1	2.99822707957516	-1.0421635280437	1.25671791223256	-0.829274030313051	0.406949362555085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54907862201332	0.958904680953568
Merged-chr1-140180279-1	2.128485130733	0	1.35128426506277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-63257992-2	4.63682299591268	4.744536891515	1.06680253553067	4.4474368343668	8.69010010180911e-06	0.000453564921128449	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	3.86712324292347
Merged-chr13-36190779-1	2.11884702863364	0	1.3705989908533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32939367-1	2.09501473140455	0	1.3976452784981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44387388-1	1.82392548721078	1.26295940770287	1.49237796447366	0.846273154500976	0.39740038023049	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chrX-108816116-1	2.01631305432996	0	1.42313206649681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94073486-2	2.76570563451191	0	1.32079534299091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97859160-2	6.40337667425324	0.442785753605619	0.779052399113942	0.568364533771058	0.569787467513253	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59764304097045	2.14242223062423
Merged-chr17-32073501-1	2.56008671953716	1.88678491393179	1.31603527960669	1.43368870361566	0.151661117270355	0.835797822556403	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chrX-86949283-1	2.49268874149845	0	1.35785027520311	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43654586-1	1.45375053000708	0	1.45024083300135	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64624461-1	1.94248596976424	0	1.46834608730674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58272483-1	2.89124438594559	0	1.35442878682419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129318193-1	3.90549078086699	-1.82973684740932	1.06477139826551	-1.71843162803764	0.0857179155190646	0.552072038981746	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50168540259874	1.38601560292234
Merged-chr2-90517633-2	5.59720841614104	-0.762774319976915	0.888264613241917	-0.858724200655706	0.390492695419752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66042780185351	1.27465395918041
Merged-chr12-16805724-1	2.4284897478741	0	1.38435623663521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99226768-1	1.91007679032503	0	1.57784524963844	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11000148-1	3.71331557656982	-3.04037001780635	1.06177125792058	-2.86348871767422	0.00419003735758484	0.0568290122807677	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31222626481535	0.306240821987646
Merged-chr4-126227579-2	4.34820907912709	-0.966457681413039	0.878751624398915	-1.09980756174888	0.271415976951142	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15247679458771	1.15658857927843
Merged-chr3-81466714-1	2.62414111001611	0.653916440789632	1.4618204172888	0.44733021447493	0.654636654468175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06732873512053	1.486851288245
Merged-chr17-12036362-1	4.75449929304189	1.14184828456476	0.76684039478727	1.48902991069155	0.13647949256361	0.775760474689832	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64922041982231	2.24517688100283
Merged-chr13-45623929-1	2.10428908886099	0	1.50729052064747	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94276305-1	2.28918773692676	-1.68387025663559	1.54853816778439	-1.08739344735999	0.27686296582793	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33008381161066	0.581381506691384
Merged-chr9-108404607-1	2.49058180763691	0	1.34055892977204	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101006420-1	2.37264532142314	0	1.40755635975319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108718014-1	2.36930016480909	0	1.38067047960538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51087898-1	2.03186707240626	0	1.49618005647054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35595970-1	1.8110211197473	0	1.45579871584541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121824762-1	4.00430415361426	-1.08337417205839	0.781864281080945	-1.38562944781234	0.165860081481015	0.88943138313335	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17670784850238	2.15292080626044
Merged-chr11-53809572-2	2.53572966525013	0	1.39549142413422	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99207715-1	1.52332750251005	0	1.65289182398163	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84936531-1	1.15170536988979	0	1.49902136665936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106410882-1	1.65942070906147	0	1.56074051207755	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56821311-1	1.4231528693869	0	1.39492364143606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94252171-1	1.8670330279097	0	1.45517713191502	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-90294207-1	2.45664748662522	0	1.3984885848671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35030151-1	2.17291026582808	-2.75303384873854	1.32344032420861	-2.08021003922847	0.0375062718275671	0.301424774178354	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52453003547915	0
Merged-chr9-65543500-1	1.62734075988749	0	1.64486427828784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26836235-1	1.78709404908536	0	1.52294749807387	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94844531-1	3.07586937079524	-1.76032589073989	0.774124689447893	-2.27395652759164	0.022968600432044	0.208886377730598	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61705454568656	1.51144536133504
Merged-chr14-63126005-1	2.3418771922418	0	1.38301662976669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30180634-1	3.71846643039624	-3.27511027966533	1.13593329485011	-2.88318891127977	0.00393671273759941	0.0544671671715373	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18046415856961	0.469435083901436
Merged-chr18-75371665-1	1.38992240989508	0	1.52290345582051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32708836-1	2.89326175524405	0	1.33440922784291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84277933-1	3.24875811998007	2.77304501928483	1.15834756708767	2.39396628272534	0.0166672808942462	0.162509719086155	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	2.64096746093439
Merged-chr10-111064233-1	2.77606981454351	-0.225591515757126	1.18760543634993	-0.189954936927938	0.849344442642995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24810989675373	1.62581156516825
Merged-chr6-31660991-1	1.49089018115359	0	1.46194248208013	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-74641749-1	1.87154024279661	0	1.44729511440311	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79371647-2	2.44104063644971	0	1.3734046434694	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14897288-1	1.91693195484409	0	1.44237526463662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11003331-1	1.02716558177132	0	1.75214273250161	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90185214-1	1.47341418002471	0	1.44464209828153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35889238-1	2.02864954690693	0	1.35693051052072	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116289634-1	2.58095039210873	5.00442709044469	1.30440917282613	3.836546993611	0.000124776328519454	0.00377133855847929	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.03774089809133
Merged-chr7-39553967-1	4.34491250905816	1.65722578276131	0.892207742633906	1.8574438480762	0.0632480330295158	0.440835966390471	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.984416508679107	1.69895031910627
Merged-chr12-34661577-1	4.92187690429746	1.07006085434442	0.632938586618788	1.69062350908446	0.0909087317134707	0.57702981860597	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06459472852794	2.77812499375419
Merged-chr15-88867299-1	2.61783438151126	0	1.37524689803917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70851677-1	1.52750036245795	0	1.46595129482063	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45453493-1	1.77702984244803	0	1.65036914907224	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79883811-1	3.13678840084602	-0.878559282782014	1.32749967199981	-0.661815065806012	0.508089749534901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903383975461927	0.306240821987646
Merged-chr6-140682963-1	2.24226428142502	0	1.36920610481041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99018220-1	1.34368820382283	0	1.53691164388118	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-61643407-1	1.25306881292607	0	1.56220246999545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13446496-1	3.17994915060029	-3.97021242928271	1.1855031744507	-3.34896819751015	0.00081113105585667	0.0161548826504145	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79877229968761	0
Merged-chr11-120938161-1	2.74388439177929	0	1.39273065512537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120327906-1	1.20216160677155	0	1.49433619703611	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122154882-1	3.33782792701837	0.0401690808847094	1.21711894871274	0.0330034142736774	0.973671864929366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.978820110692074	1.70007682937819
Merged-chr12-17700100-1	1.55587953592411	0	1.52554947122212	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4736437-1	1.03594476347501	0	1.63300808171208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34483782-1	1.98622454834691	0	1.37364242096823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79136007-1	3.81784006267089	-2.11818794859413	0.934817365274475	-2.26588425427056	0.023458470923479	0.212197846202333	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07502882066812	1.10669213789164
Merged-chr3-130828119-1	2.26659137776163	0	1.39486271872353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74990676-2	2.83013318978717	0	1.34141042377506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32282921-1	1.78787688325894	0	1.42953473405904	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89639261-2	2.61483621326892	0	1.46811019757151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127142637-2	3.52977123205709	0	1.33666646508729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87215510-1	3.72103111228256	-2.82608907972956	0.971721870250199	-2.90833124811928	0.00363363226099841	0.0509886757407503	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32303545100192	0.581381506691384
Merged-chr7-121289195-1	2.54568312596762	0	1.35273827460405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23182142-1	2.22970017125923	0	1.42489062844703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36538721-1	3.05171893830304	0	1.31574476013673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-118763239-1	1.56784061743368	0	1.4654351737826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-39001331-1	2.7227510434678	0	1.34987127547397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69092524-2	2.83899299846444	0	1.38646730812317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-88518310-2	2.6215699771168	0	1.34057286762415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23732621-2	5.74282464237481	1.01598735696393	0.739295043645667	1.37426507278315	0.169359405308357	0.903499036597263	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60972211590922	2.27420117597098
Merged-chr1-135396404-1	1.86491977219869	0	1.36093449929397	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67246961-1	1.54812467538285	0	1.51617942692183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90280694-2	3.20053321377091	0	1.32676457073693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-40526308-2	3.77141012946008	0	1.35193842498404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5768065-1	3.57473681040018	0	1.32735853170719	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120071601-1	3.92829721366893	-3.11213281052148	1.01769794412281	-3.05801228006209	0.00222810445252469	0.0352025419619629	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20666670977227	0.469435083901436
Merged-chr12-25103662-2	9.00126986928889	1.2311421105751	0.651392450562047	1.89001593357863	0.0587558291213441	0.417640025002723	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99762091205888	4.47710967901089
Merged-chr13-17780107-2	2.49926445418618	0	1.40663720864762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47165817-1	2.5406750358009	-4.35080253482696	1.19669606439247	-3.63567881961386	0.000277249591976102	0.00700856937612007	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08123824456232	0
Merged-chr6-4988784-1	1.87048720850363	0	1.42505515123042	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-33178624-1	1.88793067087789	0	1.34405791461577	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110908813-1	2.32945226017748	0	1.36581144731831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37617171-1	2.55089852946223	0	1.35049372189826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43460202-1	2.04811289225722	0	1.44820478887808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191877857-1	8.32268131916299	0.998290201535714	0.576719177703777	1.73098145532533	0.0834550720795885	0.541269602751923	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19980832937833	3.47482136950432
Merged-chr11-101589593-1	2.81120402866646	0	1.32866163117572	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122985524-1	2.43293721686164	0	1.36223635437433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44812825-1	2.0911436085835	0	1.37284304033567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-12413034-1	1.12219460421405	0	1.62993116671077	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40264086-1	3.95226917047683	1.89822185498734	1.29863840464654	1.4617016162432	0.143822994163993	0.803748797884732	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chrX-35895372-1	2.05532710217754	0	1.44205913007889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22633054-1	2.15679137221673	0.0863526399462254	1.18754972985212	0.072714967445598	0.942032937781155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71418616415649	1.58458601743443
Merged-chr5-77140321-1	2.50987810720537	0	1.3334506143236	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95950799-1	2.59577822151499	0	1.33104948179401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24953817-2	4.49707672329147	0.020749559524585	1.0286067223682	0.0201724906841096	0.983905772673271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.931934640739014	0.989878296978726
Merged-chr2-166974184-2	2.51942172720581	0	1.35950129730338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70081214-1	1.18607747356425	0	1.61347530731176	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45372394-1	2.94665641428793	-0.490688663307445	1.05133254146899	-0.466730215181796	0.640692909265518	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50886637150406	1.6950503635711
Merged-chr1-157294988-1	3.70795320624878	-0.791026790641287	1.04032086002437	-0.76036809511131	0.447034588710873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85201453134117	1.6342703608096
Merged-chr15-64197159-1	2.00574921142918	0	1.47075509336953	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50353337-1	4.63390591211343	2.08900998182952	0.715418704438132	2.91998233883215	0.00350051223212516	0.0496622823101283	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31620456275832	3.26684525578774
Merged-chr5-65326818-2	2.45252854150493	0	1.37716351261042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43174569-1	3.78575206518531	-1.51687300289294	0.996710600196203	-1.52187907161251	0.128039384010192	0.742185705174224	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13979052706781	1.46928333126936
Merged-chr6-8655670-1	1.24061456396904	0	1.49261211292082	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80963262-1	5.9709680030156	0.412150939417102	0.605376767710834	0.680817238784378	0.495987140715169	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21342769308347	3.4060907458601
Merged-chr4-128820673-1	1.61011060792114	0	1.43742779687558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164386263-1	1.26452847177762	0	1.6581964472126	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58677714-1	2.86174530741036	0	1.34359573966648	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60708327-1	1.896165735193	0	1.44703440224841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96759018-1	2.28584687458816	0	1.4123404993344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69675513-1	1.99853328365924	0	1.37513384992027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128241409-1	3.80307753905063	-4.53126974075172	1.20115084295769	-3.77244021208361	0.00016165871149254	0.00463119253011464	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24600276704258	0
Merged-chr13-60488428-1	1.92648128649929	0	1.39873425616582	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-112370504-1	2.49981819113906	5.05404948119422	1.84742724807857	2.73572314495778	0.00622433690265379	0.0771208796436888	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.46842849197915
Merged-chr6-31104744-1	2.97715980309541	0	1.3968451109698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45216699-1	3.19155073285483	0	1.35024967548459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77433347-1	3.69032170023603	0	1.34154151806897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-122707453-1	1.7808881069163	0	1.3867503175839	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110809856-1	1.80838988235049	0	1.43055576441379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58033496-1	1.77734801411971	0	1.42083139345072	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-82922090-1	3.0258272515257	-2.93743480746005	1.22247493720548	-2.40285892009769	0.0162674619702298	0.159491908463112	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09660678272053	0.609949614787909
Merged-chr9-114621273-1	3.11844435729883	-0.5662677322864	1.38646861579628	-0.408424486378422	0.682962059438218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.478543144321763	0.306240821987646
Merged-chr15-53329432-1	1.1122765551115	0	1.4610182439785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87315189-1	5.21115119839138	0.590267707718827	0.733591745573489	0.804626975808434	0.421034970559582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10314857723989	2.52123297932701
Merged-chr14-46924733-1	1.6533539271381	0	1.39219752329513	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45792941-2	2.10531203842303	0	1.74801987921053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-87023955-1	1.53410922060062	0.300852881775943	1.72667115171919	0.1742386681311	0.86167789752394	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	0.469435083901436
Merged-chr4-129881784-1	7.42076597634285	-0.730943148593175	0.682775978442136	-1.07054608198276	0.28437357817081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58351060307875	1.87671264857868
Merged-chr1-80783460-1	1.54282478653982	0	1.696378024017	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-175080509-1	5.51190774558786	2.21066241760508	0.992007485256088	2.22847352511095	0.0258489548878542	0.228383694713591	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04582716505043	3.25210242546693
Merged-chr7-105396378-1	1.98342445298753	0	1.39611716101214	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119444112-1	1.75160785738353	0	1.47564610582931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40415669-1	1.52392918381734	0	1.43844596480434	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17259283-1	2.85625101695442	-0.00278265626611217	1.71341542743421	-0.00162404062760139	0.998704203626733	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60065289088778	2.30712077184164
Merged-chr10-16658716-1	1.42325453757859	0	1.55354104263949	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140662581-1	2.77156746837907	1.56309753515649	1.20096123706018	1.30153870659705	0.193074124517242	0.992965665095524	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994684322788013	2.09296523225154
Merged-chr14-50167292-1	1.99020358782083	0.255026876905823	1.65963929835109	0.153664038420397	0.877874641123776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.915009871440972	0.735627456805112
Merged-chr8-84743290-1	2.70913824881678	0	1.3917018075324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191202085-1	1.4372598955902	0	1.40154100170263	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131980439-1	2.47207577761939	0	1.37575316960179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31170013-1	2.93872529979368	-2.19001763681601	1.0870765283066	-2.0145938025426	0.0439472273773397	0.338512024591815	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66404370911525	0.581381506691384
Merged-chr6-100435409-1	1.71268634628943	0	1.3965071717033	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42017387-1	1.68090721814805	0	1.50419692855765	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25746001-1	1.8240113960054	0	1.44450368461952	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108737341-1	3.45163693490661	-0.888750379377831	0.87083722418858	-1.02057003845459	0.307458190677605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94625418356973	1.29358708977899
Merged-chr11-118208398-1	2.35949316874944	0	1.45797264868525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75450842-1	1.63911886450549	0	1.41679326727532	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106687676-1	7.57753486000486	-0.0669332674353423	0.511824585636822	-0.130773841885815	0.895954216410381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50609841268826	3.3629993673302
Merged-chr4-101299809-1	1.35832311351028	0	1.70889059953584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-71986481-1	1.53833197645216	0	1.40103756397122	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35778252-1	3.17886752796721	-3.13631150287554	1.24439395719323	-2.52035256579805	0.0117237340363385	0.125118262998298	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30767635687881	0.609949614787909
Merged-chr3-126463336-1	3.04756817970535	-1.93045724087646	1.2664627151301	-1.52429062286145	0.127436128564093	0.739988601951157	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.890861798978068	0
Merged-chr15-99234530-1	2.17097487105122	0	1.39015649608913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77917394-2	3.30271609696328	0	1.329025616237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12795557-2	2.13414024148706	0	1.36707397850513	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122112498-2	3.01148907153584	0	1.39300066442542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33018522-3	3.27127922090435	0	1.34635391535613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-60429139-2	5.55044072204227	-0.340669773822457	0.675991964157527	-0.503955360249031	0.61429274650051	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70208129197969	1.57664565284388
Merged-chr6-146745362-3	6.92341247804291	-0.0610645075935834	0.635413731406733	-0.0961019640831394	0.923439591416519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59665135300025	2.22281280114811
Merged-chr2-128787986-3	4.75368099591862	-3.5381495282653	1.08905015331754	-3.24883984221219	0.00115876700254659	0.021278867782486	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99584270481946	0.306240821987646
Merged-chr7-18959633-4	4.33403391780516	0	1.32917043376751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-11450036-2	2.74576215387087	0	1.33227016361942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90967675-2	3.40659781861431	0	1.3370121611804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30869358-4	5.28583449369123	-1.23040561157816	0.899946058825371	-1.36719928879305	0.171562848222559	0.913006935067855	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39956062773555	0.898163539755574
Merged-chr10-67052630-1	2.78033812181665	0	1.33824212492961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32566920-1	2.57596231235666	0	1.3417410142537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67430214-2	2.59422008655456	0	1.37973972506939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77331169-1	1.19138811351458	0	1.43987832702738	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119430747-1	5.49304992730094	0.117684802253641	0.645513932518583	0.182311792705191	0.855338044534562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10321151111047	3.00419886809525
Merged-chr9-47787723-3	4.56118527175146	0.0256425269202435	0.826618070478658	0.031021009382719	0.975252784670003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17565396408799	2.56270667391421
Merged-chr13-105032299-1	1.46057953677779	0	1.43847237243105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91866094-2	3.04059266690441	0	1.32597010987293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38438609-1	2.13437406073468	0	1.34981162052656	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-39067163-3	3.19000015197686	0	1.33282153727365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-49413770-1	2.97896855847953	-0.937070664491718	0.860414151431821	-1.08909257586284	0.27611306347904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04807002139968	1.94051118279724
Merged-chr10-22154350-1	3.74651805113672	-0.420113929449927	1.35045679007726	-0.311090241862453	0.75573201922977	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0
Merged-chr2-103664598-1	6.2737366797679	-0.205019696746658	0.633635681697145	-0.323560845243955	0.746270535484243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.80281561541136	3.49985909124589
Merged-chr2-129401562-1	6.64568380637856	-0.798705345128611	0.512278618064366	-1.55912294006434	0.118967285076254	0.705997075342241	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.72109572273644	3.05353529260579
Merged-chr19-45436260-2	2.82146817421461	0	1.32603606689076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22962518-2	2.84428206378667	0	1.35915048193618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73554004-2	2.08572175846998	0	1.35080562435735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156530046-2	5.23660173615838	2.827812689452	0.82783485754954	3.41591401191121	0.000635683165955522	0.0132629045609751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.854675866246237	2.8372990371539
Merged-chr9-54676744-2	3.33444853813961	0	1.37859677610445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-8342125-1	1.73349084756115	0	1.37997364105712	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99393775-1	2.00974471908293	0	1.39387133405763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130034603-1	1.88796629913623	1.13826712917542	1.34706751354235	0.844996347794145	0.398112878185057	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.775974565785538	1.19133112147929
Merged-chr4-151806866-1	1.67775588004009	0	1.42009103680741	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60910336-2	1.97471241054251	0	1.41672113499645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-59207310-1	2.00931136977099	0	1.44475521083571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-21644065-1	1.58243705262305	0	1.44969396539609	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21914438-1	4.97184570318506	-1.01407834566016	0.867056048989289	-1.16956492817536	0.242176098092467	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.26538873355077	2.42194161705889
Merged-chr11-3130402-1	1.84294496411108	0	1.46512720835259	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-100968870-1	2.02389090124636	0.841602453419267	1.16789258950797	0.720616314359726	0.471145613458483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4268528132229	1.68041597300842
Merged-chr7-99044574-1	5.57624348305592	-0.656261246112945	0.789166526637573	-0.831587787826098	0.405641657593856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22922323804543	0.905469781553611
Merged-chr5-66323267-1	1.23795020697793	0	1.57815565040533	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52042327-1	5.01165348819992	0	1.29755274858914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-10392330-1	1.62818845118137	0	1.36908450102607	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-78232962-1	2.51335103609435	-0.098299598617152	1.75116328486817	-0.0561338850960161	0.955235150082036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48262897499107	2.00129118555875
Merged-chr13-42393023-1	1.50273051155482	0	1.44190382052855	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47039047-3	2.98174866190797	0	1.37267895065046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80954189-1	4.06380206271631	1.62599346026985	1.16463009493111	1.39614583836254	0.162670582705149	0.877745772213838	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29081764289817	3.12314239243196
Merged-chr10-120712104-1	2.47468429135872	-2.37255267102283	1.55828451248167	-1.52254139216489	0.127873482162713	0.741678713974191	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33430096521117	0.306240821987646
Merged-chr11-21718976-1	1.48910390624853	0	1.44736509714484	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-22399453-1	4.09720163297851	0	1.32828667278659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82369867-1	2.2792813555062	1.32973499373671	1.11147184982757	1.19637307408461	0.231551003993347	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02064222773751	2.21550655935007
Merged-chr15-51683660-1	0.960975217417951	0	1.8079534855222	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-93816292-1	3.24496518964015	0.144837003694953	0.977023272296556	0.148243146096719	0.8821508823031	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34984016773179	1.26501898168246
Merged-chr2-60825925-1	1.05885962417321	0	1.5918197947129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-95746041-2	2.4927218648989	0	1.37311734627785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41379774-1	1.74818713235648	0	1.3769558621515	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86221092-1	1.30340319437263	0	1.54877615836811	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41481285-1	2.80191300589476	0	1.33402026272692	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106469594-1	2.19906516102647	0	1.40809218103344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54602001-1	4.27397694191601	1.16002293292125	1.2022047094638	0.964912983445755	0.33458839780516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.797562664687189	1.40000983364339
Merged-chr7-90058886-1	3.16164075982649	-3.39979545866189	1.25128805941045	-2.7170366032772	0.00658693225516721	0.0804391095395546	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32668587869032	0
Merged-chr5-145177886-1	2.61742062740831	0	1.37427091616885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108667880-1	0.808009077046749	0	1.97390928785545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-178507540-2	3.13888917039789	0	1.32460567606662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21310047-2	7.95376670445961	2.7065146330865	0.662970636353861	4.08240498850977	4.45720362888998e-05	0.00166720336767856	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42797029322109	4.50044355139161
Merged-chr14-75835237-1	3.9862293725695	0	1.31486818407192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61423420-1	2.54927133998422	0	1.33837574305783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-108360218-1	3.46448483042992	-0.326272025151326	0.764820226955288	-0.42659962910526	0.669670967924181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94948293361534	2.30095837608674
Merged-chr4-136132796-1	5.33486963923092	0.333814621873214	0.704540422307117	0.473804782953533	0.635639123534544	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67221365329644	1.62306943957144
Merged-chr1-144283977-1	1.84590047366964	0	1.40305015609441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70120753-1	2.78624595817923	3.73316038939893	1.34009357520556	2.78574605420841	0.00534046915296665	0.0685077144228031	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.290685631813391	2.11190195371995
Merged-chr11-53528999-1	1.74096690208982	0	1.40694956633722	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104317397-1	2.34645716548359	0	1.33818768057196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37821916-1	3.56383572218864	-1.4376727192232	1.16733888455554	-1.23158128136079	0.218105536823685	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98172207906737	1.34805514843284
Merged-chr12-41033467-1	1.55468737316292	0	1.48961729341323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103690686-1	2.18862660512726	-2.30525359538894	1.24110882018944	-1.85741456179248	0.0632521963223005	0.440835966390471	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31669594151849	0
Merged-chr10-78295837-1	1.55080265242943	0	1.42926703659615	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16083747-1	1.5506211997035	0	1.40629525606308	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-28757948-1	0.971263060304579	0	1.59138360318462	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116124396-1	2.27603904750771	0	1.46531055084736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-127132713-1	2.10970741842408	-1.44143518304562	1.1795752437725	-1.22199511277944	0.221709475151822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46219676003941	1.29606516661881
Merged-chr8-105544058-2	3.04193325185176	0	1.3424135884287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70068377-1	3.19925024055833	2.80563776010084	1.35542266173257	2.06993570294489	0.0384583659708596	0.307262548322752	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	1.52242786274935
Merged-chr7-81839956-1	1.3350857341264	0	1.42951725604014	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106420978-1	5.73861523503315	0.942302014851018	0.705313105583909	1.33600525410755	0.18154755598044	0.950302586038624	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88957049905063	3.59724686306
Merged-chr19-32269929-1	1.75860954294231	0	1.446812522867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-35711565-1	4.34770855147828	2.56274593188029	1.20662545770406	2.12389512878058	0.0336789138218661	0.279595470988985	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.529828923389565	1.94621284947395
Merged-chr11-20711942-1	3.60901064754113	-3.28663727785128	1.03582772304425	-3.17295743754763	0.00150894643837789	0.0260733867843246	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.43600119101208	0.609949614787909
Merged-chr13-107044356-1	2.99340486639585	0	1.4019517491034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-67085642-3	2.99419739371152	0	1.35118722598463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17222208-1	4.06655681798689	1.81555874071174	0.695558481515943	2.61021724119415	0.00904847408535849	0.102765347996184	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20128245430681	3.53266863442497
Merged-chr13-37338864-1	1.8704701702124	0	1.37865738369212	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84315697-1	1.28354535027268	0	1.51921791066218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124507562-1	2.76515011669544	0	1.3728508228904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101102861-1	6.18988095954217	0.379784825463459	0.734109390326194	0.517340917400205	0.604918195580442	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00075359437914	2.25121929154759
Merged-chrX-151949106-1	1.33868300847157	0	1.52618145335683	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73044705-1	1.54687584677499	0	1.39915864662666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68805844-1	2.14932080220631	-0.668281882928686	1.93446513127015	-0.345460805742154	0.729747971071797	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88467514930694	0.961728545204858
Merged-chr10-28380438-1	1.47522670184073	0	1.45876990999719	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97288909-1	0.814478698712329	0	1.80225867210579	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62169808-1	1.56005166261306	0	1.62353040600089	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59847757-1	1.74548930501222	0	1.52631849199134	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153945381-1	1.77549925187651	0	1.38412590333614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142903207-1	2.04597367407284	0	1.46102487892927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99188091-1	9.10071264137851	1.32061373208665	0.644788387922986	2.04813510420164	0.0405467630760733	0.31918669798447	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42705780889152	4.32801625117215
Merged-chr13-75778112-1	3.78613599856132	-1.45151535420799	1.20926752530971	-1.20032608486384	0.230012722953507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18612483331563	0.851599296279844
Merged-chr1-95355392-2	2.37052009721273	0	1.38669205144725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99602521-2	3.62950831918106	0	1.3188142193082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87227028-2	2.58960065082136	0	1.32491170619524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160359095-1	3.60191401693213	2.10762969520124	1.20756458258231	1.74535567339528	0.0809229764827768	0.529434603648732	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.76302217368042
Merged-chr4-133187074-1	5.00834543443113	-0.138699913713351	0.84777348968342	-0.163604919711685	0.870042171525975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57756187443668	1.80720362046621
Merged-chrX-74413536-2	2.70131084088115	0	1.33048186309026	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98770695-3	8.46502482903411	-0.920221628727042	0.614487715123043	-1.49754275973244	0.134252088087451	0.766588338706972	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.31503903626941	2.13923004754663
Merged-chr18-82878082-1	2.83253286310607	0	1.3548884382554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52031482-1	2.42725382174943	0	1.3528006864529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20892417-2	2.9575511173422	0	1.35872724018959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121252793-1	4.42226070702695	1.37394449071401	0.704131043634884	1.95126248605856	0.0510258291833605	0.376363887218808	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2642979481152	2.64322776951181
Merged-chr1-64909100-1	1.78032773258698	0	1.49875556400379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96080679-1	2.0094026359984	0	1.35342234333053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15029241-1	3.3072940663723	0	1.32186264462442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-66404691-1	2.4783184389332	0	1.42254741374409	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55683618-1	5.61625937787275	-0.492884995592422	0.632482238884315	-0.779286698171731	0.435810848588102	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1250167216561	2.08925071846489
Merged-chr6-35148187-2	2.82145890863521	0	1.3474383347082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16068259-2	2.28030422245428	0	1.4241915983176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59767095-2	2.94792411490995	0	1.35042271333289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35731351-1	8.00129209725215	1.49130170996621	0.790271036137378	1.88707625836228	0.0591500694824307	0.419357756363124	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33570919650788	4.19523610847719
Merged-chr2-14208848-2	4.74006458339248	0	1.31068615078094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57705363-2	4.05375258716396	0	1.32479572188736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-114636447-2	3.47175707822601	2.61124706786323	1.11603543380853	2.33975283289367	0.0192965055983979	0.182297159871752	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.20539659680455
Merged-chr9-55252256-2	3.29368934024411	0	1.32027075011605	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103682563-1	1.17645553234928	0	1.53571852312842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116116060-1	2.51116298314064	-0.819083301188133	1.05583796205052	-0.775766102970389	0.437887101652639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46352465188374	1.37490486545505
Merged-chr6-91110584-1	1.47045357676313	0	1.49292782233569	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44564877-1	4.8391701787778	-1.74946364212225	1.00027343402867	-1.74898540999551	0.0802935414233772	0.526370561582264	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03797557096014	0.900948542443349
Merged-chr3-100563706-1	0.915176365208759	0	1.94414167848144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156300204-1	3.38500797406086	-1.68223135800389	1.06610473098968	-1.57792317124628	0.114583261047149	0.686176482440159	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77676094055695	0.61242769162773
Merged-chr5-149646152-1	2.18556324611487	-2.81709199004311	1.45490175541916	-1.93627643897611	0.0528338528583031	0.38579516693247	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50833752766233	0
Merged-chr7-132620660-1	1.78298429240439	0	1.44236085192927	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73310375-1	1.43549442426187	0	1.42312480269706	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76419434-1	2.58842023091825	0	1.37569233045573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16065092-1	2.36115891268183	0	1.38591780132904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-87552401-1	2.07233731441165	-2.86981683767525	1.34321012517671	-2.1365360369791	0.0326357468780222	0.273428385099672	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40666132706155	0
Merged-chr13-111792624-1	2.40565079934466	0	1.33700894352218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-35043320-1	1.81994518494659	0	1.48256811486699	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192712438-1	4.13975022813745	2.53146353525701	0.971906448944157	2.60463703889104	0.00919716330228782	0.103960877556011	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46895811295526	3.17282154714725
Merged-chr13-80955932-1	2.14019937330893	0	1.44395530758794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23268316-1	2.37592951375431	0	1.40366107493516	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-13597152-1	2.55804992677393	0	1.37206925104923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32755266-1	2.40554451639006	3.50730771544828	1.22121445842175	2.87198345160519	0.00407904326781253	0.0557634228825267	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr10-45859331-1	1.48885073266571	0	1.45818659757337	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3722517-1	3.38263642567443	-1.73365003836218	1.02019471952723	-1.69933249523736	0.0892565531869285	0.568808145558127	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.36048496980513	1.14490468848716
Merged-chr2-14107835-1	1.95615347492032	0	1.57820598704776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80025268-1	1.57468466404324	0	1.45921492212227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96571426-1	6.10448787487532	0.822865640990714	0.744751228422259	1.10488658438864	0.269208736229496	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27323582839141	3.13202489384516
Merged-chr4-67477724-1	1.21949739784876	0	1.66876566053831	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98217594-1	2.03973478013352	0	1.41677632050306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91668038-1	1.74441452168115	0	1.38339403773822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61631108-1	1.46887971312627	0	1.44795693822823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93924076-1	3.81577324909146	2.5063356141158	0.937931573188859	2.67219452437724	0.00753569505737392	0.0887416704305561	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17531244888202	2.93477196246946
Merged-chr7-34973260-1	2.50184872633815	2.5180974046495	1.39517613711694	1.80485985794813	0.0710966147443916	0.481288655038539	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr19-40596532-1	1.33260673588636	0	1.75658160084175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76227789-1	5.2339658471197	-0.107735968413812	0.817930733246351	-0.131717716469963	0.895207571897761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53292954772142	1.40264952818025
Merged-chr2-61815275-1	2.01258595123599	0	1.37927992854889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117776222-1	1.93133440474799	-1.38662106932217	2.01673743804109	-0.687556566941622	0.491732067274253	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06060026178667	1.41293295987929
Merged-chr12-26436002-1	3.36625400857792	-0.372863185985961	0.798056491128044	-0.467214025737606	0.640346759830282	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17792855049875	2.48586599042228
Merged-chr11-20466206-1	4.06648225139427	-3.37019002677731	1.21569218682178	-2.77223960416172	0.00556720412371132	0.0707358585782695	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33907770027902	0
Merged-chr15-8279588-1	2.15306317098416	0	1.3722006949384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186261499-1	1.12036670647668	0	1.72513066086699	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-104473162-1	3.4941421226286	0	1.33044069266515	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99255021-1	1.21882584648144	0	1.55703156019667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41141126-1	5.73172163028878	1.76643400112081	0.789015500472109	2.23878238141565	0.0251700791967554	0.223825855396625	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43703385109542	2.47111615257247
Merged-chr11-107676313-2	3.14798591726571	0	1.31573345358978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93358558-1	2.2073079310793	0	1.33826343689728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92703797-1	3.63032122409803	-2.44865937030062	1.01892136843663	-2.4031877690991	0.0162528396849406	0.159434990470531	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16782630068581	0.73596151290311
Merged-chr16-92671624-1	1.96123363212526	0	1.35662907918466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-88368852-1	2.19829238882954	0	1.35067106972678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59261276-1	2.42870994988809	0	1.42901523932905	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35270578-1	3.19946082878995	-1.29195465262838	1.26328178028945	-1.02269713122306	0.306451068217956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	0
Merged-chr13-95502382-1	3.16714526876866	2.7915546349532	1.2288978553537	2.27159207967674	0.0231111597149991	0.209811314634111	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.8460126076219
Merged-chr7-30247224-1	2.45159149096997	1.53038411403579	1.05356904466458	1.45257125936441	0.14634283069845	0.814558655436194	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58225006122096	2.59516630972471
Merged-chr4-124114154-1	3.06684126023429	-1.15196031653058	1.05276279477898	-1.0942258999307	0.273855914895919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48984251742165	1.2972429702454
Merged-chr9-21101095-1	2.88778092712131	0	1.32565021600679	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-100453714-1	4.06171821766963	0.0243557960069499	0.784816832398625	0.0310337329699104	0.975242637601681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91780192623956	2.52965008261298
Merged-chr4-59815275-1	4.56716186498665	0	1.30664563191613	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-8545247-1	1.81378166951719	0	1.4534528772144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44061767-1	1.7709953792237	-0.472257377396644	1.4841482627278	-0.318200943434489	0.750332517172931	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05552087422678	1.0023426291647
Merged-chr2-53029014-1	1.48210558175705	0	1.64110815807159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32956534-1	1.34935787214464	0	1.71283774275266	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110477564-1	1.15257374466933	0	1.57573425006507	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3697210-1	1.64887048291352	0	1.50120708938604	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151116996-1	1.36046112563481	0	1.58795264017009	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88097948-1	2.72984022788105	0	1.37706895419544	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-70425509-1	1.2671073352499	0	1.73502537845446	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130558184-2	5.0255640233181	2.63181201287062	0.952815309489155	2.76214286930554	0.0057423344859912	0.0722724555704124	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	2.72081599314607
Merged-chr10-81432331-1	2.3556976063704	0	1.35707439979153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-107075807-2	1.59746701297537	0	2.43324961277249	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34518447-2	2.58630775175352	0	1.369809815686	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-66357228-1	1.71445647752276	0	1.42596737881723	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52099089-1	1.9254049471425	0	1.49262565793612	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14959130-1	0.955961504172642	0	1.63213770810379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45918819-1	3.35425944350873	-1.67620513798123	1.1472240485122	-1.4610965836665	0.14398893765294	0.80405923088951	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85613854965609	0.683637474991079
Merged-chr9-70388990-1	1.10092087818239	0	1.71135329198054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10486558-1	2.35970622266091	0	1.37710218897304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36723293-1	3.87558534281519	-2.2755711289253	1.21712183907016	-1.86963297829226	0.0615348024170709	0.431935111997136	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08453557475833	0
Merged-chr1-154788265-1	3.07103963170329	0	1.35319002037651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91750968-1	1.65848075896756	0	1.54810443978952	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52077794-1	2.51246830986706	0	1.37234937763333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43400089-1	2.669415304075	0.97715644205468	1.30836427583825	0.746853502575675	0.455151995736644	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23607483969203	2.03283973350588
Merged-chr1-170820304-1	1.48340549272983	0	1.45471391358724	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125128539-2	6.1784573364847	0.132027898227824	0.724233035585725	0.182300298026374	0.855347064812228	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.61533601557661	3.61055593703767
Merged-chr17-74804711-1	2.32193487021401	0	1.65666212729704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121446753-1	3.05319994963381	-1.21242918434102	1.33261492905066	-0.909812097936456	0.362921613310159	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83563568396979	0.735627456805112
Merged-chr19-41053658-1	7.42703140126792	-0.30369791916618	0.666346443769952	-0.455765798715703	0.64855840059219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76658471096639	2.39855328800337
Merged-chr12-112802742-3	3.02965173964617	0	1.36316083898167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129300628-3	3.58038254251393	0	1.3959395261438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43476927-2	7.21466952747355	0.86923566853682	0.65083031385651	1.33557956664026	0.181686732548893	0.950708474032835	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75093396759692	3.14826470229156
Merged-chr1-156621961-1	4.3947727155791	-2.87273068024453	1.15942549298311	-2.47771909245605	0.0132225200862545	0.136671749059852	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70150014666835	0
Merged-chr4-141678449-2	6.78802774109364	0.828963725253418	0.570050335511564	1.45419390817392	0.145892553467186	0.812467598335329	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77740378175131	3.25633562329303
Merged-chr19-10034929-1	3.14021007266457	0	1.32232518063113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126230552-1	2.36925976510001	0	1.36532052439248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103899360-2	2.04794561866939	0	1.39600720256269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39638251-1	1.38901971682401	0	1.57772409834499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94680989-1	4.67811668719693	-0.700775439486419	0.786622544095364	-0.890866203551703	0.373000953210838	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65207988073281	1.01372795773128
Merged-chr8-94702997-4	4.27553464790282	0	1.30249374698036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-30010158-2	2.14685521273385	0	1.41960504263063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24173834-2	2.87189469995773	0	1.37645698839324	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-65189359-2	3.28267976635217	-1.53993607544472	1.24590749970221	-1.2359955099498	0.216460232670814	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.871810791226776	0
Merged-chr11-16987529-2	2.67198394407004	0	1.32283856781242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-61985273-2	4.07471381090555	0	1.35837766008309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65965226-2	4.17572340642376	-0.435974834137373	1.29716674312154	-0.336097758017008	0.736797149030702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	0
Merged-chr7-99090065-1	1.9505631571368	0	1.55990075721466	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155538422-1	1.33525802824112	1.49441654745344	1.84626607863471	0.809426422738885	0.41826990884553	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.581381506691384
Merged-chr1-170992720-1	3.10765710003462	0	1.32647658616975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17636696-1	4.21922955795148	-1.07232334240634	0.662941152387166	-1.61752417774194	0.105765181047572	0.64737088054839	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2835463875805	1.57664565284388
Merged-chr13-99152446-2	2.31464807174406	0	1.37946695236432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-45103528-1	1.89401984377682	0	1.45931725614016	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70901227-1	3.48531564738576	1.79032782226132	0.959332807375778	1.86622182468533	0.0620103368434678	0.434258590093985	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716345901999145	2.00098049458557
Merged-chr9-89928634-2	4.06124939233578	-1.40550375823154	0.975672196552627	-1.44054915492894	0.149712093616717	0.828220545541751	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22881614555291	1.03956264035389
Merged-chr12-100680226-1	2.55778556372922	0	1.33349475351387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21784091-1	2.11510773147585	-3.77202359751797	1.36859358520873	-2.75613128563852	0.00584895153111425	0.0733740807740817	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24689662423511	0
Merged-chr10-60658372-1	2.03280077478299	0	1.36033690123729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136519215-1	2.03604663056923	0	1.50391252823124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72533982-1	2.40611447538322	0	1.46729569093868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85288566-1	1.4015314706808	0	1.52076594938554	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-41182524-1	2.09782806835037	0	1.3925076512452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142219297-1	2.57121407252397	4.06241542399779	1.43197833760009	2.83692519455717	0.00455502827480646	0.0605108513204926	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.3401588617582
Merged-chr14-45662911-1	2.53278937443122	2.75431181525914	1.52698031382548	1.8037638012234	0.0712683428411846	0.482206733201109	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.735627456805112
Merged-chr4-124228756-2	4.52877636597328	-1.53057225604757	1.24595570647342	-1.22843231753377	0.219284722329521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10845354346777	0.469435083901436
Merged-chr5-52686076-1	2.71073387442383	-1.57650809289098	1.28679227966839	-1.22514575025058	0.22052031017974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81698692414637	1.03956264035389
Merged-chr11-106663494-1	2.11463943027122	0	1.38059630242609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-20724597-1	2.27178403447019	0	1.39063850665413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-138740831-2	2.56759107257442	0	1.47304675531774	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36727881-1	1.68333219863462	0	1.39783066793686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84633323-2	7.11764528589808	1.05759355804633	0.732977704781938	1.44287275199041	0.14905632016927	0.825863515158647	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33174889427919	3.59595938994595
Merged-chr16-73933975-1	1.46863233361215	0	1.41966491232926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147866322-2	2.2341999498299	0	1.40930809816661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38403670-1	2.08090612031012	0	1.38743641551423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19504128-1	2.16806139728708	0	1.40392282941808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41842181-2	2.6633280257659	0	1.36233324839946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129611726-1	1.77486698155175	0	1.44229058642947	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-32613721-1	1.21233144842597	0	1.73211997266812	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65510658-2	2.29755384369453	-3.31443276797735	1.31673131961813	-2.5171671081224	0.0118302704249195	0.126009158251541	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01740230001222	0
Merged-chr9-47770353-1	1.91437912044007	-3.67356310191245	1.54848640646815	-2.37235734622382	0.0176749869607211	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12318235195834	0
Merged-chr17-71214775-1	2.44841136672876	0	1.33978326008676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83750049-2	6.2982917587894	1.17531374950689	0.666396361369137	1.76368572465216	0.0777849058619024	0.514831607257356	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55031215267894	2.84583565619994
Merged-chr10-117806496-1	2.63658131463167	0	1.39502091835423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31005202-1	2.12233497698877	0	1.45299773464504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72355152-1	1.0715356553902	0	1.81251092877266	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146525695-1	0.97040423096307	1.7548374623707	1.58406840457051	1.10780409312342	0.267946432003523	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr11-107786748-1	7.46082617833928	-0.59355657885029	0.572186895918832	-1.037347382619	0.299573990833605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24920370524618	2.26028312783496
Merged-chr3-38103145-1	1.74193929510941	0	1.38282844196063	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13997965-1	1.50588872214465	0	1.42981195911053	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34644585-1	2.58927816713559	0	1.39647134074894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-10501926-1	1.86996623026128	0	1.40371227894064	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25039078-1	4.27884793527205	0.856828221188255	1.11770143029584	0.766598483247416	0.443320277556054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	1.10669213789164
Merged-chr8-33990143-1	6.40001052846243	1.05045658559162	0.730276977963632	1.43843585008089	0.150310426819647	0.830067197748388	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51416429660346	3.81140286917101
Merged-chr5-115494183-1	1.76087909266194	3.31495308406766	1.30103890431792	2.54792771612432	0.0108364922063472	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31470332505763
Merged-chr12-119088755-1	1.49267614800593	0	1.58158699248641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124990773-1	2.15084783166426	0	1.36721568772189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125302313-1	3.40366404018306	1.59076178120156	1.06571115337595	1.49267629991707	0.135521940075359	0.771883264722774	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.19380919831911
Merged-chr2-102804305-1	3.81194041140842	-1.96365062758705	1.18529228169024	-1.65668051494174	0.097584084456625	0.609280487569522	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40491214975681	0.423054662900563
Merged-chr15-25428727-1	1.87997270105653	0	1.37911274932493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-48320763-1	1.4851301429233	0	1.40768681578855	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123933857-1	2.44636168369672	0	1.35804888876154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-111976873-1	1.76871876425319	0.570909088744858	2.28984986213403	0.249321625048726	0.803112005011665	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.469435083901436
Merged-chr16-43354697-1	1.91992425615274	0	1.41747780987549	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107619656-1	3.29505953904254	-2.06078851124335	1.11558309106607	-1.84727478190265	0.0647073259116594	0.448204888596915	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21329002144815	1.0023426291647
Merged-chr8-123004049-1	2.14287155291642	1.90331265603678	1.40380913173296	1.35582011329931	0.175156410161265	0.926033234498224	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.683637474991079
Merged-chr6-125355800-1	2.17014996187282	1.85552906387331	1.36904079890338	1.35534972030024	0.175306160864836	0.926600047551045	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr12-83771026-1	2.14197986786068	0	1.35344178102343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29309547-1	5.48665772314228	0.957320992595436	0.825073587282108	1.16028558828185	0.245932550156074	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15717699568862	2.93135243438938
Merged-chr11-5732509-2	3.62689357727541	-0.348318037138748	0.808760690356254	-0.430681215459812	0.666700179143771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4496637319311	2.09927897987273
Merged-chr13-40843551-1	2.21751917851463	0	1.3541807371784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64342259-1	2.51004126392875	0	1.37756079458088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37559530-1	2.84682992469245	0	1.37108439207511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146656062-1	1.72301880261137	0	1.52239203313917	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-71931857-1	1.47066542412487	0	1.43753258171168	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88926995-1	1.09372805249356	0	1.54809726234661	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4348432-1	2.1477870803103	0	1.40103486669783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116089046-1	2.12868432620941	0	1.42544180837415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100723680-1	2.76827633176201	0.146126396104069	1.19555336026283	0.122224905186955	0.902720902837668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.937105555727254	0.683637474991079
Merged-chr3-135683477-1	3.16760772863942	0	1.31524469908419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-56525559-1	1.15375278056287	0	2.43571901882898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55057050-1	3.16080631278352	0	1.3832885310463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95385871-1	1.53256937805387	0	1.43780346333715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58189749-1	2.34463128426392	-3.84615805313735	1.19297808883266	-3.22399722940498	0.00126414622714555	0.0228132834463002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55435205988028	0
Merged-chr10-41933603-1	2.39176950844039	0	1.36777694453807	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43966572-2	2.18344869194802	0	1.49218135098853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34123087-1	1.17531876810491	0	1.49692267132479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119920028-1	2.36822674252229	0	1.36800953889857	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119923188-1	1.94404891053695	0	1.44532699389386	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37477880-1	3.00148633736203	0.924824275558555	1.05492055501342	0.876676704386322	0.380662263420295	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	1.14490468848716
Merged-chr7-74696443-1	4.05297380197757	-1.61080363893408	1.049088910149	-1.53543100432288	0.1246779928074	0.729187158148425	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4770330057036	0.73596151290311
Merged-chr6-140619335-1	1.79109142687721	0	1.39378291187948	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30411751-1	3.73098089323852	-0.193374904783173	1.0849544389549	-0.178233203017671	0.858539834936196	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82225022564895	0.95685815637649
Merged-chr2-30328843-1	1.18073071123566	0	1.8181444543242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70588767-2	2.55427535606779	0	1.43729355297625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-69121443-1	4.158240676997	-1.76127222498607	0.841200407092459	-2.09376054758909	0.0362813162557677	0.294294797920729	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88527200850373	1.41959898789419
Merged-chr4-135438111-1	1.92984683132013	0	1.37946983761359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137652671-1	2.62815900054523	0	1.36438362352467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72587706-3	9.63589362486979	1.36057114179774	0.666316121898567	2.04193039472164	0.0411584362772537	0.322796348652595	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35535797481894	3.86643688500114
Merged-chr1-88256413-1	1.73205707659494	0	1.43042204619257	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4906918-1	2.13585895575491	0	1.37834059470514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107893562-1	1.20068817830469	0	1.4044580526877	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26300953-1	2.18064857983344	0	1.35246430187792	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13163968-2	3.38109434837694	0	1.31680157969909	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92099601-2	3.26386299312577	0	1.32051935927491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80810216-1	2.5692585825014	0	1.35242390540461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53692113-2	2.38641314889041	0	1.39276655265461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70820266-2	6.8613371385644	0.5271542877404	0.740857003802357	0.711546607556986	0.4767455797905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09109741103814	2.11774774311448
Merged-chr17-56357724-2	2.45591014473335	0	1.38397260216398	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142715648-1	3.37647332233235	0	1.33603836908058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21153703-1	2.67660803226859	0	1.35003420963548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57400886-1	2.40211280803605	0	1.35257108828199	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84288682-2	2.48025452298421	0	1.37986126837888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78139420-1	2.00438727382626	0	1.34054487282179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75318617-1	2.48033655513218	-0.815468684588359	1.00141707352244	-0.814314740730337	0.415464667258595	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31709139020248	1.21171060354126
Merged-chr11-69689221-2	2.47493913398668	0	1.36483298473576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122404915-1	1.76383257702833	0	1.42850376802814	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53613867-2	1.89942214589397	0	1.4454162410953	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155571605-2	3.38871007890078	0	1.32411844119197	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117873350-2	2.86799936234993	0	1.3510025554559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184778713-2	1.62457980554811	0	1.43586442197384	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79202398-2	3.66250457124671	-0.857344473512529	1.2890734223656	-0.665085835017219	0.505995594101316	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	0
Merged-chr11-116664308-2	2.60444574461171	2.32858027075604	1.30962545350747	1.77805055981432	0.0753955513741415	0.503093811916129	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr6-54034618-2	2.60054370530543	0	1.33694222570539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58189130-1	2.27247862339023	0	1.33731137199847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4746302-1	1.83827579310972	-0.832147737347216	1.4541560381656	-0.572254775627077	0.567149383238527	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06005753851604	1.4944959016211
Merged-chr7-35235436-2	9.31486561015305	2.29879501428027	0.590222046852457	3.89479692691812	9.82810332081514e-05	0.00312215478659206	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8747460382555	4.15356762517577
Merged-chr8-90793889-1	3.6156155773007	1.30250976429673	1.31101134334872	0.993515251340029	0.320458921799145	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr5-135551093-4	7.89715567382539	-0.0678728227791722	0.528438034377986	-0.12844045727909	0.897800416003433	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13625761751784	3.07651089655187
Merged-chr4-46657314-2	7.4034065343523	0.556715715555952	0.51004404444808	1.09150517806433	0.275050654672255	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91527258493929	3.42797074811148
Merged-chr2-128393049-3	3.64546754237818	0	1.3150375898624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-39175081-2	2.41143635242095	0	1.35625614219278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50060958-1	2.50058383088116	-1.52024031523324	1.4121790972541	-1.07652090176752	0.281694358107869	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862965511447223	0.306240821987646
Merged-chr2-152821209-1	0.982695241118351	0	1.63187565467227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34215823-1	3.12761793806606	0	1.31459728740046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6336323-1	1.5279417204762	0	1.47050748413141	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172831296-1	1.90039414228317	0	1.46181193028133	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-96784991-1	1.96395830208301	0	1.373603516763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105711622-1	4.42481415358646	0.167141766927271	0.929311298181312	0.179855520162482	0.857265995442517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.394127336072	2.13923004754663
Merged-chr5-36562064-1	5.93974956019273	0.492760372808092	0.792782324399944	0.621558223035638	0.534232398684414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97802089848001	3.44600009520379
Merged-chr8-110950491-1	1.23335589860678	0	1.591933819233	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9885617-1	7.66924948125894	0.655121003461359	0.83653668412256	0.783134817510738	0.433547947113023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97256807585738	2.77613351389415
Merged-chr5-30851005-1	2.27206895519785	0	1.36333092691045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89417013-1	1.40055254631775	0	1.58473065037992	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103381019-1	3.41078114597564	1.70800246856217	1.01218941659292	1.68743363698802	0.0915200004984835	0.57967102380284	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49210071656217	3.01790015288392
Merged-chr15-8682719-1	1.65120927802449	0	1.35733702938085	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-25540647-1	1.61081458031156	0	1.53488831445263	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55028615-1	2.27401421680805	0	1.37263990053503	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51761416-1	3.20271179938194	-1.08236125202903	0.977940231667912	-1.1067764848809	0.268390577432519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10881506376773	1.98439646562239
Merged-chr19-38845562-1	2.05582347285395	0.659076349927239	1.16649403169026	0.565006191220912	0.57206955306813	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46751376876441	1.74704977609752
Merged-chr1-184610470-1	2.34291270865459	0	1.37010023512928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-128637554-1	3.18354004244839	1.11550880006815	1.27065440287607	0.877901022924288	0.379997434044175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	1.41926493179619
Merged-chr17-5688367-1	1.80965711114176	0	1.39583022164077	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99230734-1	1.95426033858032	0	1.45419610778593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137953170-1	1.3592738146075	0	1.4726763653364	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54690798-1	1.93866880581873	3.06342697132155	1.38633669694582	2.20972796728995	0.0271240475498036	0.237006023284517	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.793480537552656
Merged-chr17-23731419-1	6.56523065497337	2.78276768749675	0.963757134277446	2.88741591478133	0.00388420409787291	0.0538775633580138	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30494625855404	3.90879166436939
Merged-chr2-59039159-1	1.77787101974404	0	1.42390612998696	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121469829-1	2.4647991152338	1.31744240781722	1.05702799264897	1.24636472920234	0.212630523925655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.974378703053907	1.34805514843284
Merged-chr4-45447421-1	2.61627266250084	-0.64740299936854	1.19463944789478	-0.541923339723469	0.587871317495117	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36196353701645	0.733321818366247
Merged-chr1-36129966-1	2.56320150110581	0	1.33916214732341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40786275-1	0.837617775347244	0	1.6315313337732	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-121795831-1	5.30261920027542	0.100115849110409	1.15597328457077	0.0866074073222064	0.930983577836048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86485778745926	0.961371261847668
Merged-chr10-31544381-1	1.33713623713587	0	1.50556018413124	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21917750-1	2.64128170460251	0	1.40408022804145	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21269147-1	1.50553119426855	-2.96373189523998	1.42760245466406	-2.07602045342336	0.0378920593433856	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47483410640084	0
Merged-chr7-78924501-1	2.72269286219455	0	1.37098529176559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-104111403-1	3.80946028676515	0.434958409531112	1.20521306522234	0.360897522672367	0.718176055583825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68095215082152	2.41373779137467
Merged-chr12-17792549-1	1.60410456153538	-1.46576142998751	1.80628669128908	-0.81147773332784	0.417091374952605	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.543422078079461	0
Merged-chr3-148347860-1	2.44815580980052	0.966282957261388	1.07274304537926	0.900759004146951	0.367716469044141	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.919932168754152	1.57403368136583
Merged-chr4-99062179-2	5.06653356356634	-0.785748150495779	0.844610183653349	-0.930308639065938	0.352211306124822	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81763764372599	1.15307255889252
Merged-chr4-139268530-1	3.08401877334813	1.67444191301483	0.864837861798852	1.93613391246773	0.0528513020166386	0.385836351422106	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59947886585825	2.61944793579884
Merged-chr9-62932774-2	2.27808084377516	0	1.39174273590344	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-65452098-1	3.70956908227598	-0.079642632395171	0.878627424595165	-0.090644373446307	0.927775172127047	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35558935103435	2.32785350547649
Merged-chr16-25597613-1	2.55160644302003	0	1.37016046078012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27961939-1	1.52053304250992	0	1.39893128008665	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127479271-1	2.20622370744295	0	1.35102825431985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99240262-1	1.62444919317336	0	1.44174077883774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35828031-1	1.83268386627024	0	1.39888326765986	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-117424226-1	4.59701974456967	0.188577240252844	0.726302513334527	0.259640076676959	0.795141419461103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29495674348464	2.41272900099005
Merged-chr8-83250880-1	1.92551375330992	2.70835796410317	1.52895292731009	1.77138086838816	0.0764973878318097	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.290685631813391	1.31470332505763
Merged-chr10-127746430-1	4.93596197780429	-0.24707513104245	0.823360443104023	-0.300081371544873	0.764115088148266	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1666768002091	1.40000983364339
Merged-chr10-63416431-1	2.3274456925297	0	1.378060966439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102377893-1	1.97826775008255	0	1.46457506105831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-49022443-2	3.96049944057975	1.9550764323712	1.4130686446652	1.38356791069724	0.166490799708956	0.892055411428458	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.803125334851723
Merged-chr3-20003017-1	2.35239873169056	0	1.33899397399934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78203925-1	2.31337761437642	-1.8273668052889	1.09574309784376	-1.66769638694038	0.0953760130247286	0.598251484799776	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12290171752107	0.892489746801999
Merged-chr3-149348891-1	0.960801239224062	0	1.74241132283209	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83235725-1	2.28398095579099	0.750402769751038	1.48528807489898	0.50522372220761	0.613401710487419	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.423054662900563
Merged-chrX-57303675-1	2.16847284974341	0	1.34759224680987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-171630725-1	2.71831067310139	-0.997323837131425	1.0634353351824	-0.937832140926899	0.348330680817018	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31266941321088	0.843323834477631
Merged-chr12-31610517-1	2.23342398561833	0	1.43776295531977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40392887-1	2.55919130870245	0	1.36465505537084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48988316-1	1.75986108638288	0	1.44630948726721	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-21250613-1	5.37999086578746	-0.453701888429334	0.71030847989226	-0.638739225664533	0.522992590267519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96446289660768	2.22392366263603
Merged-chr2-181737789-1	2.2735472451948	0	1.38376681499104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36930590-1	2.09929335076693	0	1.38125802454172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70863615-1	1.70351579309933	0	1.39720937002141	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93974599-1	1.8708769937958	0	1.38689718627125	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87617005-1	3.4126816796523	-1.35809732002059	1.08657195545847	-1.2498917473418	0.211339094507275	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9345033497675	0.683637474991079
Merged-chr2-144715484-1	1.0029812023045	0	1.68461870780372	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139366642-1	3.95184808783565	0	1.3381570526073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37131542-1	1.9043514219527	0	1.56028101857351	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16301083-1	1.7969677287853	0	1.39507763554642	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13484690-1	2.57993506752852	-0.647474925775375	1.02971342800713	-0.628791378421154	0.529485645120305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51715173728882	0.73596151290311
Merged-chr8-108710997-1	1.98678785697262	0	1.38044907352226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-109610073-1	2.91360949124743	2.52417082912016	1.09475202875093	2.30570098326298	0.0211273461396752	0.195373693470775	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.75733238011489
Merged-chr2-156960123-1	2.21963484260603	0	1.38319526966528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84096580-1	2.20069175786703	0	1.36711397126526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-99446241-1	3.41647655288865	3.01150726161041	1.40287971047733	2.14666107088094	0.0318202741137155	0.268023670048319	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.90181590910944
Merged-chr3-90617719-1	3.44993636614298	0.453071469472905	1.19785479133526	0.378235720013995	0.705255492300389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44620977347243	1.05629245276768
Merged-chr4-132065844-1	2.48429903051449	0	1.36633532474068	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-86585294-2	2.90974585702362	0	1.39123837558866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3496228-2	2.00764638162887	0	1.51125654829733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24862859-1	2.73930695344491	3.12591416976828	1.93274873874692	1.61734120276542	0.105804649978318	0.647430532585744	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.87647711809217
Merged-chr4-105378012-1	2.00155941802232	0	1.42848142069638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25463022-1	1.61978795407525	0	1.61659929042917	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119336663-3	2.4918721298926	0	1.35759996960512	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34060188-2	3.45500614014207	0	1.31538930158555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47331667-3	13.2040176258476	0.736647096050609	0.487877358772386	1.50990219735588	0.131068381920474	0.754540964230047	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.79739062233331	4.61280561609301
Merged-chr14-63077320-3	4.06728667741771	0	1.32333662820451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104432018-3	3.22637548126679	0	1.44252591010966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124616650-3	3.40572492099255	0	1.35044475666955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129382306-2	6.06362995488196	0.964501127119449	0.749230294342486	1.28732264886043	0.197981852481707	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76461901975432	4.12456745674006
Merged-chr10-44533484-1	1.85497540077989	0	1.40498958253237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-51724507-1	3.4973390060488	2.50737912756301	1.80873950708235	1.38625773238492	0.165668218390025	0.888595206346105	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.729467998682602	3.43360160126904
Merged-chr4-10998904-2	5.39474309782316	-2.82411655205642	1.09486967112743	-2.57940887991565	0.00989695649180052	0.110062375580871	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71875621519097	0
Merged-chr2-153079234-2	9.33203948465018	1.70872490425451	0.676980216564419	2.52403964317606	0.0116014844830481	0.124158304131881	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61744783174297	4.11252919526046
Merged-chr11-109621345-1	2.48119046627501	0	1.37069293559848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27726518-1	2.21641762131404	0	1.34977079069317	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12865850-2	5.68154190333851	0.201747432072185	0.778532409403358	0.259138129171524	0.795528666497988	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6397597592207	3.31841236551031
Merged-chr3-100568693-2	3.67510668151997	0	1.32891027779419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85593215-1	1.92734012980804	0	1.67521766305628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-77251939-2	2.81892576036375	0	1.39885488706487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39002646-1	1.92119038486548	0	1.42525569500514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5793640-1	2.77428022974855	-2.12545719067597	1.23264815232313	-1.72430160761624	0.0846534092397538	0.547065892752498	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42376394567077	1.08974267817771
Merged-chr11-4866055-2	6.30318707304773	0.115193762774975	0.588770171785539	0.195651492373725	0.84488295398513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12728839574024	2.51874890260649
Merged-chr2-38346587-2	4.79265720457815	0	1.34475762965554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99095398-4	8.75779793005774	-0.124260410452469	0.575301976756446	-0.215991627828309	0.828994273569231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49876186110343	3.55089549138126
Merged-chrX-169136026-1	2.84433217849893	0	1.32232391815137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116908785-2	2.68539716533059	0	1.40962306503781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99450108-1	1.24710394081353	0	1.45512160049921	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136793723-1	2.18413282489783	0	1.36673253486195	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101751611-1	1.80112297760183	0	1.43761895733686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142074965-1	1.62798004194818	0	1.49308814592556	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79589312-1	4.24126975033291	-1.20879650351217	1.24542612619055	-0.97058868293503	0.331753143774314	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0
Merged-chr9-81626087-1	1.45323896158219	0	1.50932179905227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121669401-1	5.58707812759502	-1.09280925747137	0.84346841457555	-1.29561372848952	0.195108596967161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79649238951474	1.29915063860089
Merged-chr3-9705212-1	2.24544588033455	0	1.37301394601082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-79562225-2	1.88146786558782	0	1.47265018475339	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-28197712-1	1.76202417976791	0	1.39450624795262	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33893893-1	2.01710487591745	0	1.41400100358554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126464183-1	2.14600735279323	0	1.42662526738159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21860319-1	2.2341580682931	0	1.43918150856688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12002485-1	1.9604578488356	0	1.35033939632592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101971953-1	1.98010756180145	0	1.35940206003896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75861843-1	2.30038045744294	0	1.36216089865117	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-125479101-1	3.45539534927251	2.03283684791906	1.15387132370778	1.76175350418351	0.0781109536233335	0.516369837543657	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.40264952818025
Merged-chr7-123360383-1	2.80065428474424	0	1.37949841013185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-111445001-1	2.00056352093378	0	1.44311671239685	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76318694-2	8.44805956097766	1.73989516171485	0.777103249230951	2.23894979648677	0.0251591828872489	0.223771874908149	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57694718544153	3.84209457079675
Merged-chr5-118462461-1	1.11141615930438	0	1.56171266840359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151394182-1	1.32267955794141	0	1.53588988540806	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83297638-1	2.22693402993831	0	1.36754510617559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61059192-1	4.66092305491367	2.08552807548071	0.82389324494493	2.53130862314584	0.0113637811243795	0.122252797529316	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.856023420615499	2.51338020061524
Merged-chr8-33970184-1	5.29496122136993	1.19086554404918	0.703968188396646	1.69164681540723	0.0907133346293486	0.575901444155194	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02098319568587	3.4373360589375
Merged-chr6-148579080-1	1.54335424674297	0	1.40518822957888	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-49331923-1	1.54077167800604	1.80202768323206	1.47843207008162	1.21887756610459	0.2228906656027	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr9-103225649-1	2.43031985199068	0	1.44644191167525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157717679-1	1.6045204071282	0	1.51230759923473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-28876737-1	2.76142720366205	2.49473221459169	1.73809261336862	1.43532755124977	0.151193780284947	0.833807793556586	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	2.13397455622281
Merged-chr9-40391623-1	2.67867323122593	0	1.39402624139704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151490061-1	1.52631733074829	0	1.44466625556067	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-125224777-1	1.73955007448789	0	1.43719088159941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120471357-2	2.10903805631947	0	1.39966967384742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135191757-1	2.79141099701247	-1.40345999113078	0.934473666296658	-1.50187216799028	0.133130125731161	0.763048960269141	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03709875122008	0.905469781553611
Merged-chr15-36888550-1	1.54672133754946	0	1.41332171483679	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116217273-1	2.35124854568813	0	1.35503963743306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-16077209-1	1.40152193716446	0	1.48400290263985	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87552060-1	2.36737761737919	0	1.35782862370758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-34667173-1	3.07461503506836	0	1.33894937451778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-92037261-1	1.69171726398126	0.100675040551873	1.47406649911763	0.0682974890292513	0.945548822928085	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr10-77353582-1	2.28895602094281	0	1.41492598514678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98923297-1	2.41211596028673	0	1.3529862380356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44979647-1	2.14075740171314	0	1.41710710922917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65119875-1	1.16272623415208	0	1.74273047078581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-83243049-1	3.50076349750488	0.802671278243667	1.33811930584973	0.599850308365409	0.54860600185095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00967833035899	0.961728545204858
Merged-chr15-67067126-1	3.71006161699653	0.513728685991579	0.914366853692542	0.561840889044651	0.57422443049832	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96519130758978	3.19786007171311
Merged-chr13-118778705-2	4.77747102623718	0.0672057249253012	0.897392151213776	0.0748900297761703	0.940302209366595	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.23747236183156	2.90796878661446
Merged-chr1-161730006-1	1.63528992773483	1.04720720836777	1.48197258212413	0.706630622590057	0.479796053668544	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	1.04885222765555
Merged-chr2-59132448-1	2.12217343511145	0	1.45712696452333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140763429-1	5.26633760532296	0.49707672105341	0.953366243192481	0.521391149102237	0.602094315936211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66480818707792	1.30831180799264
Merged-chr18-34512044-1	2.16330006772594	3.45739128934733	1.4713255380536	2.34984794318264	0.0187810816445625	0.178485829136937	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.961728545204858
Merged-chr6-146678683-1	4.10423196221483	-0.528002646285027	0.94987950040834	-0.555862765811922	0.578304673797747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06834095443416	1.05916644618774
Merged-chr10-19580966-1	2.27677546915716	0	1.39831108470297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-61992519-1	3.11326805630167	0	1.34272313911278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11751276-1	3.36352964942866	-2.44849805969153	1.21818348755503	-2.00995833936793	0.0444355983404308	0.34105771575241	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32258082590559	0.61242769162773
Merged-chr16-70932993-1	1.18757753276515	-0.402072629300703	1.53123550402707	-0.262580529411231	0.792873908862294	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0
Merged-chr6-5038179-1	2.29099715368979	0	1.41827031866393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81801289-2	2.82038613234919	0	1.42672829446336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14293091-1	1.18392138488252	0	1.59397605045136	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75765986-2	2.23916375929751	0	1.3911580367767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136613372-1	4.51148948902123	3.28198249185842	1.033105218473	3.1768133905174	0.00148902813582369	0.0258438333502085	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	3.36955178159892
Merged-chr6-99205059-1	1.89048068541482	0	1.39331276341245	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-57176831-1	1.59434438526092	0	1.36059937037746	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102700383-1	5.0499263216764	0.0973797704577173	0.832894372350186	0.116917311114661	0.906925579951619	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62789456251863	1.74723369056052
Merged-chr17-81533902-1	1.95297339645036	0	1.38735434069606	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138069883-1	3.67351687153559	3.56218528060273	1.13960364647963	3.12581070761465	0.00177315646571355	0.0295469865461273	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.674898740693665	3.6737490476797
Merged-chr2-155637556-2	6.4708008528075	0.198830168742315	0.735209343971728	0.270440209135809	0.786821609704849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23754730631206	2.56481436735453
Merged-chr19-6489210-1	2.02767825777596	0	1.38753010817715	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99279084-3	8.89672544305989	-2.35870275539945	0.857465146272155	-2.75078557496354	0.00594525454311139	0.0742969216626806	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.99343969858282	0.73596151290311
Merged-chr12-80198786-2	2.87187056778721	0	1.32624086597868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139466523-2	2.47308891964965	0	1.33348062677331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145348743-1	3.96086430764939	1.49711429177457	0.999553715588772	1.49778272885786	0.134189709499573	0.766422377650892	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	1.72583980988184
Merged-chr15-79808272-1	5.45539584533405	-0.26629514133781	0.810626053075355	-0.3285055301733	0.742529463619546	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51244054928642	1.77777167463237
Merged-chr16-38506253-1	3.03617172456082	0	1.32018860545856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25627477-2	3.50622928814134	0	1.30944975255057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-78210935-1	2.68392747738295	0	1.35050787262173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32134218-2	2.63025085632715	0	1.36507330896505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25474861-1	2.95614179875577	0	1.32994663506943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-145179790-3	7.85217198313378	1.44330175575114	0.504202740017661	2.86254246793776	0.00420256936919799	0.0569661427601971	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45434954311869	4.27933162307737
Merged-chr13-107797035-1	2.39958095747706	0	1.40270006194005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130454562-1	1.88820250544801	0	1.38723488949113	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81760584-1	2.12778160208263	0	1.35360528563521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13611041-1	1.42281782368405	0	1.49026410544871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150272976-1	5.83033576311095	-0.520864054633235	0.765363487149279	-0.680544686777884	0.496159636845708	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40058046014578	1.29915063860089
Merged-chr4-105565923-1	4.17808754453346	-1.21545322662318	0.818721778864464	-1.48457419602171	0.13765665513659	0.780301161220992	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4486892424832	1.67333134268571
Merged-chr11-106458732-1	2.05343391685888	0	1.37688359256418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120605057-2	2.85751148391835	0	1.35627572099217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183633052-1	3.799199577128	-3.72942028307264	1.17693338552244	-3.16876072082632	0.0015309037328694	0.0263744886180027	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35751581399506	0
Merged-chr13-24813661-1	3.22167612145469	0	1.3346594048488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-36220375-2	2.4784098673145	0	1.33201072504533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-23040105-2	4.99308039542659	0.979617176078788	0.97071141897838	1.0091744641366	0.312890970976878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.994303173147804	0.843323834477631
Merged-chr3-88592167-2	2.90165368516634	0	1.3401662794934	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28975397-1	3.66365315994314	0	1.30493633481147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-5100811-1	6.22530798394806	0.247616111003263	1.02376581393919	0.241867922948609	0.80888250604372	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06131005637601	2.69159338225134
Merged-chr12-70231666-1	2.49942616278527	1.73253239510814	1.30621418962287	1.32637695170679	0.184714869255617	0.962396575217475	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16944489465408	1.95953533891209
Merged-chr2-6081361-2	2.49798983774264	0	1.44062329965417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19790181-1	3.84822845956752	0	1.31044247615822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61317149-1	1.75951719677792	0	1.52674489438375	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88589627-1	2.43007866591058	0	1.38295708359001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81181455-1	2.2624362454714	0	1.37609126068298	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29431433-1	5.18283502891394	1.32421771534882	0.731620365510027	1.80997929769996	0.0702989976536367	0.477224007965359	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98239809179168	2.91384368695212
Merged-chr12-117747682-1	4.0411712433834	5.00868610114595	1.06780359152853	4.69064361731183	2.72346984264974e-06	0.000179042113015886	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.18565220784089
Merged-chr9-61901692-1	1.28588869906522	0	1.44542156265894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123019017-1	1.68561880347222	0	1.43923291422883	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21782452-1	2.54576205074111	0	1.3849774501185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-129928023-1	2.07128296560768	3.53077721370857	1.5314752638094	2.30547452978515	0.021140011626648	0.195418757922612	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	2.32078820428742
Merged-chr2-166698120-1	1.89245514380015	0	1.46885866356036	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102607031-1	1.67312484564764	0	1.44851624268842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53853803-1	1.66520396243483	0	1.41038432293004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44375608-1	3.1105917935163	1.56349027037581	1.08958492948836	1.43494116710111	0.151303863372038	0.834143445196087	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60978351914886	3.33612437467064
Merged-chr18-53855117-2	2.64846013821307	0	1.37011718329703	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-137577360-2	2.29518042528736	0	1.39075512560585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8810247-1	4.43054564704374	-0.987703092039518	0.790267685330004	-1.24983358218307	0.211360345781037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93979099147563	1.428339764855
Merged-chr4-150061820-2	7.47584581772601	1.32043003466379	0.686243966499802	1.92414082909707	0.05433693353046	0.393658925607021	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81495333422997	3.95484384881356
Merged-chr10-95766768-1	1.36378823167881	0	1.38522939708833	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-13349516-1	2.53117370974482	0	1.3334839562172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-8841050-1	1.9717648777567	0	1.46098905237146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38267145-1	6.17969707420377	0.166051784329704	0.747518786105703	0.222137272555748	0.82420702330486	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48843766544248	2.97749077568792
Merged-chr8-119835162-1	2.19192607348825	0	1.46386289347991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111052910-1	0.967006417171967	0	1.80220084987205	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27380836-1	2.26690418104747	-0.817516421630139	1.38135800153023	-0.591820817430759	0.553970581574003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0
Merged-chr19-55814644-1	2.3572309461132	0	1.38756493738833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135241307-1	5.4876184145439	-0.976490758650182	0.668219221925011	-1.46133293777018	0.143924094878736	0.803903231382672	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9530716640031	1.99834080004871
Merged-chr6-125272286-1	1.52642101819068	0	1.52213767743713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83643166-1	2.85345164930577	0.92818713122546	0.827914878172371	1.12111420593678	0.26223925250147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3819181571508	2.00098049458557
Merged-chr5-115529395-1	2.21860807438905	0	1.34772429068983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92199573-1	3.15615035094946	-2.36102649696234	1.11209139143265	-2.12305078085422	0.0337495967942981	0.28001538244289	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5261681943352	0.61242769162773
Merged-chr9-84538303-1	2.47112956762211	0.627944272050067	1.288274725314	0.487430405728884	0.625953350510241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.999441686761971	2.05801908341688
Merged-chr10-8849360-1	2.22505773543209	0	1.36652674682563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-89998217-2	6.63396087691675	-0.497733217924778	0.634306257342962	-0.784689118486277	0.432635864279762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00949677260244	1.64500873683875
Merged-chr8-104051198-1	1.92791076751425	0	1.36506374369819	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28676778-1	2.57943787949142	-0.723640159219043	1.5053140574287	-0.480723710542588	0.630712877170844	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13388733767844	0.666688015277142
Merged-chr16-92670506-1	1.62740619149642	0	1.37531716113047	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-10089750-1	2.65469840634104	0	1.34352287098021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27358659-1	0.88075002718546	0	1.76965984006304	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77836187-2	4.91731934870474	0.920471351631377	1.05165618376931	0.875258821121799	0.381433094492103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60919496597102	2.92269452602859
Merged-chr7-97589645-1	1.45121547003248	0	1.49131662537383	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-134696522-1	8.24437118937076	1.55057494327268	0.56567497095643	2.74110579906162	0.00612327871746243	0.076056219553564	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59385095336932	4.25507651542068
Merged-chr4-141861447-1	2.11436627867194	5.14111125910255	1.35466713132246	3.79511035606486	0.00014757779856921	0.00431096058350631	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.71394436113018
Merged-chr1-136580398-1	2.12156721151821	0	1.34017094267047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24721913-1	1.813767517259	0	1.42498223277845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-161442685-1	3.26341427928301	1.31252797387736	1.08040978505444	1.2148427310025	0.224426079672362	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29805787528988	2.92526156064402
Merged-chr13-110678667-1	2.98409880486804	-1.21764902825176	0.810725873857708	-1.50192446980602	0.133116616267449	0.763038456720413	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11241716897241	1.50921536809972
Merged-chr14-70972324-1	2.96819450202409	-2.62256369040423	1.0148286681802	-2.584242811259	0.00975930608684157	0.108948175533937	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08680976097069	0.581381506691384
Merged-chr5-90247730-2	7.34897146896547	-0.856663353237457	0.559637140703482	-1.53074785594216	0.125831721334924	0.733943228651035	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40432992892623	2.18317309328714
Merged-chr5-111273795-1	3.0820878853806	-3.22777656843228	1.1686991520419	-2.76185412027796	0.00574741518433761	0.0723224711410987	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90160151780475	0
Merged-chr19-9140585-1	1.68094300854888	0	1.39808806483326	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155851635-2	3.98491295741146	-2.24625840608802	0.90088331019407	-2.49339551601208	0.0126527816973255	0.132458935083856	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22765010723158	0.825079211029734
Merged-chr15-72716674-1	1.4652157364423	0	1.46330999006567	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12051295-1	1.93841162713322	0	1.40343234063189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7864979-1	2.29018084270611	0	1.35369951103812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-53522918-1	1.22332534823726	0	1.65431300115825	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28727765-1	5.17230190277312	2.5070105553458	0.831208987500704	3.01610135723379	0.00256047654466094	0.0392394231443278	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22871541631087	3.59196204118832
Merged-chr6-87499559-1	5.26938847524618	0.646732918443993	0.754669581964082	0.856974938304554	0.39145873531828	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35973136635856	3.30465126446199
Merged-chr9-50697798-1	2.0833650668037	0	1.39676231332984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101858981-1	3.82146717917412	-1.05345129197875	1.11406380016425	-0.945593324029953	0.344356050616953	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78310126152116	0.73596151290311
Merged-chr17-26499251-1	3.04249993170909	0	1.39522243795285	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24164197-1	4.1946291720663	-2.73136501924061	1.09427512906305	-2.49604961923906	0.0125585033126321	0.131682920004374	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55384369687924	0
Merged-chr2-83621982-2	2.6365806955105	0	1.4189042897142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20831108-2	2.97244785812676	0	1.34752279546058	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43391376-2	3.8863059581317	-0.48492534387085	1.22385277860641	-0.396228494429722	0.691936472358766	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83598448120862	1.5122114716189
Merged-chr6-97391374-2	2.2880814822629	0	1.50949411138931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-21160179-2	5.41898427554177	-1.95821842487404	0.781855894496206	-2.50457717164853	0.0122597857017843	0.129548505250453	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37245169323368	1.69181239031707
Merged-chr15-66815603-2	6.44536028853308	-0.96994555303149	0.828428114948975	-1.17082645498002	0.241668541757479	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62444008661988	1.57167815999277
Merged-chr15-101258606-1	3.072100716466	0	1.35232345038461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87528911-1	3.838293933273	-0.782633162032536	0.896982594409023	-0.872517668582158	0.382926033563165	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33143701476386	1.40343015234056
Merged-chr17-34383252-2	6.20284710903906	0.386238127746012	0.855735341476582	0.451352315401107	0.651735645177313	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.92134602544544	3.02473920353734
Merged-chr11-116419467-1	3.24534294923362	3.78140974891444	1.02810691382738	3.6780316308128	0.000235040817441394	0.00618565334535857	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	2.94623723803635
Merged-chr19-55563003-1	3.25407497892281	0	1.35100689390969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53145981-1	2.96859301688652	0	1.32458366623339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115270678-2	7.04906839905055	0.703513993067981	0.607577326232626	1.1579003407356	0.246904708473796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91309217946169	3.58163110970199
Merged-chr14-40929366-1	1.62087050308522	0	1.52227583411919	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128776969-2	3.35827538604587	0	1.32271309045888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105244372-2	2.00535575869048	-0.559026052908314	1.30652019367581	-0.427874024155364	0.66874283977642	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5690977793107	0.900948542443349
Merged-chr2-117382076-1	3.55836159633844	-0.877056478380035	0.838371320240207	-1.04614322699964	0.295494910059625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54007817178642	1.72583980988184
Merged-chr8-70751273-1	2.74756578602848	0	1.34779717823666	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30764593-1	2.54255571078693	1.94060365801456	1.33668974349778	1.4517981210333	0.146557746530769	0.815406054968008	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr8-71587083-1	5.89331072003902	1.72386916442622	0.726324497890219	2.37341459558861	0.0176244683992263	0.169897677194482	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77676094055695	3.45948392692984
Merged-chr1-154031078-1	2.47929057598274	0	1.36339504196917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70864087-2	2.62969165808662	0	1.33834560716355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34964704-1	3.71363244556625	0	1.35681817889723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27115153-2	7.23066217401561	0.653230737948896	0.522163908728818	1.25100706316366	0.21093190051511	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02357382446547	3.53630256557261
Merged-chr10-81218224-3	3.85768567959346	0	1.31757290848047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32658611-1	1.42952056021628	0	1.63615671936888	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16229672-2	2.05256750926395	0	1.47026791994147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154692084-1	4.86618382278566	-0.229608379401747	1.11521881371881	-0.205886393394041	0.836879654256437	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.93839751767718	0.735627456805112
Merged-chr7-132226857-2	2.83950302861394	0	1.33850813720626	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11593525-2	2.24234866303099	0	1.41546605461219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-12139319-1	3.00506567851218	0	1.3810383338089	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107585039-1	1.64829102652093	0	1.40270148357407	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33994118-1	3.55038807791976	0.679010669350515	0.834895869896313	0.813287852813121	0.416053039861175	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67833937983491	2.22772873920999
Merged-chr8-26123316-1	3.72955636723673	-1.16762240702818	1.13020798535974	-1.03310401461775	0.301555224810905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26235336416088	0.469435083901436
Merged-chr11-11798063-1	2.61516934053225	3.27833409427041	1.21867336883165	2.69008429831643	0.00714339718172126	0.0852610006837432	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	3.19869191737501
Merged-chr12-86048053-2	3.87773550435943	0	1.33100961826459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-65279377-1	1.98101029840133	0	1.4256735353287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-122315104-1	2.26383029055869	0	1.33572590718521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130799757-1	3.50131026774819	0	1.37329613440634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46192828-2	3.79905085800821	0	1.32775257104914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129258951-2	5.79943260598878	-0.889083838801362	0.851772618454659	-1.04380420259857	0.296575986831905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33885309085149	1.38860239282551
Merged-chr9-118623614-2	3.22883759727407	0	1.34137962282836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75456091-1	1.08661419156113	0	1.86335041289849	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55484756-1	3.4904853848057	4.00320618325147	1.3538978938844	2.95680065781481	0.00310849010796424	0.0456158532663444	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	3.17516046326173
Merged-chr8-90914211-2	5.73442818180361	2.00932872968927	0.762547770241999	2.63502013657661	0.00841322918728798	0.09694425577015	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76326010667133	3.81110452458127
Merged-chr4-10972808-1	2.1360113196898	0	1.39573271826801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6138842-1	1.81218856768158	0.0963303318071478	1.53411447726862	0.0627921405048318	0.949932024488463	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr11-116100046-1	2.03474659946651	0	1.37884571601793	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162226973-1	2.6498115944936	-0.601283381481076	1.37145640827741	-0.438426899937931	0.661076850062154	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03394117216057	0.563523181795778
Merged-chr11-119235868-1	1.43508052956239	0	1.44577601933332	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45401920-1	1.67050409438885	0	1.63311594785363	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135952035-1	2.42991630333801	0	1.34773495316803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-73923381-1	2.24622503496855	-3.26053791479394	1.3632830695824	-2.39168077968775	0.0167714222198764	0.163403214012232	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92130891562711	0
Merged-chr11-74493682-1	2.68645916140558	0	1.34229841601652	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100914858-1	1.74418604942366	0	1.48491999242414	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5658871-1	2.03166511750328	0	1.36419906873489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184718756-1	1.48743024264623	0	1.51809093704629	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-90377626-1	1.80215736946762	0	1.48002249356796	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75151660-1	1.58297757956252	0	1.4879248985745	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12472531-1	9.05353516599833	0.195424281605308	0.576483460800461	0.338993735108994	0.734614449698789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.66878728020216	3.72852000511914
Merged-chr16-11686177-1	2.27185936740621	0	1.35709534620371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-74452928-1	1.63049985335811	0	1.43981736017659	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-34942202-1	2.08208507030486	0	1.3810837084338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35028010-2	2.30436188969416	0	1.45289326726913	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102540676-1	1.64117897053462	1.25696667816192	1.52135310661319	0.826216262811042	0.408681424520087	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr2-129895045-2	5.79961257575099	0.927241180671754	0.622198923339077	1.49026484278636	0.1361546127418	0.774660772445768	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12349043259169	3.69946545045264
Merged-chr16-21248928-1	1.67596466570643	0	1.47181860801984	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-43571469-1	1.09537673490253	0	1.6046982591237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21049061-4	8.44509735262972	0.122288722377506	0.483519624870706	0.252913669037128	0.800334926433761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94481642733602	3.26193464270395
Merged-chr9-121284710-1	1.67792923217786	0	1.43933630462802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-12042192-1	1.91413359776264	2.60119222735199	1.49648863818588	1.73819711087502	0.0821760880164804	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	1.26514550294121
Merged-chrX-36851445-1	1.9983254674509	0	1.44338914409841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87133715-1	4.04648582255978	-0.804981759976175	0.773156278980722	-1.04116306348493	0.297799875125514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71237252036076	2.12114437764854
Merged-chr12-25164580-1	3.85584184987905	0.728523348229013	0.92630406634174	0.786484022580377	0.431583975846033	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09294445298397	2.00353870693411
Merged-chr2-84458120-1	1.52749559615876	0	1.42024720521915	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-119003479-2	3.28372598550952	0	1.33801598285823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137195241-1	2.68633813433416	2.78210928529301	1.55482071301331	1.78934411022938	0.0735594142928053	0.494121452135861	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr8-75101432-1	3.65269580477113	1.55381343729168	1.07383367276564	1.44697775521405	0.147903153890301	0.820726859214979	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08776570511608	2.49898368658353
Merged-chr1-184695643-1	1.63695074409149	0	1.58169453835835	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6140292-1	1.52178421317184	0	1.4560087746008	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23122184-1	3.68106232830926	0.653404342337116	0.949085926999055	0.688456465057	0.491165376548132	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90502774168036	2.1872165920609
Merged-chr9-7490393-1	1.21090496721034	0	1.81483623264129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7874373-1	1.930352141681	0	1.4149578894522	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-24993639-1	3.3003982791549	2.13273683249296	1.19058614616077	1.79133348676221	0.0732397954809271	0.49243005201118	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02962416752978	2.65719405378217
Merged-chr15-14449194-1	3.27928581102028	1.5103413077657	1.21806324382259	1.23995311033758	0.214992737946721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60870812473141	2.88299958146536
Merged-chrX-168415582-1	1.39806461285692	0	1.44987463206148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-142688676-1	2.3928230994269	0	1.38370541104434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34642623-1	2.1467063158633	0	1.39728630616661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173431209-1	4.97945975272557	0.416260859446975	0.79558018711802	0.523216724331554	0.600823444320389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54814621805418	3.02779196282874
Merged-chr8-36542697-1	2.31752574605153	-0.654310928589459	1.29547775605498	-0.505073070943326	0.613507514543199	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20817267037163	1.5268023559189
Merged-chr14-27317366-1	2.08200378667255	0	1.40645756864754	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13181207-2	8.6958877954787	-0.107856464098412	0.619826247273357	-0.174010804758394	0.86185697080978	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32848973482353	2.0802601033517
Merged-chr1-78914132-1	1.38393938926552	0.0917484647177149	1.42306108789368	0.0644726115401798	0.948593914552367	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr13-93940051-1	1.8309213020853	0	1.47715379065171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36518542-1	1.24923985708328	0	1.47449941275457	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102711012-1	1.19136678074952	0	1.54121614916178	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3640085-1	6.50825358475151	1.30459815235736	0.616016217882874	2.11779838660906	0.0341921460439284	0.282360669200877	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04485845485378	3.30992332074145
Merged-chr7-75649240-1	2.10249933777299	0	1.39181954972724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-68690314-1	1.69812410848495	0	1.43522799283474	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-24967869-1	1.42437785128825	0	1.42350129622006	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-68172949-2	6.33601694426937	-1.25410913725841	0.646709993046344	-1.93921410020418	0.0524752733857886	0.383734245150822	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.3528563206869	1.96739710961373
Merged-chr6-134141901-3	6.50663896532833	-0.366561691571866	0.593160073145541	-0.617981061381932	0.536587822713502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20392422037917	2.39543092688359
Merged-chr9-57433947-3	3.61141639873459	0	1.32366320589527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99580833-2	3.4302014220824	0	1.32953180935046	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55650402-2	4.50920662374337	0.948939524480638	1.12390414627568	0.844324249203258	0.398488239164357	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	0.984484304269093
Merged-chr5-5270379-2	5.08914366050167	-1.96176428737813	0.84865576894448	-2.31161368268088	0.0207989819343576	0.193195490189415	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90080332200228	1.03956264035389
Merged-chr13-111804376-3	2.66265507915622	0	1.34474267171406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-77298827-1	7.83644812496818	0.0866121300453358	0.572480099723144	0.15129282238321	0.879744731019094	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86152470738918	3.20213796229157
Merged-chr19-57243755-1	3.19903493356862	-0.186022189559595	0.979156323774612	-0.189982115258661	0.849323145251119	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75324624593098	1.29451429493117
Merged-chr9-114694299-2	2.72747003584626	0	1.3663649540681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73595982-1	2.12516704754124	0	1.33563954186609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118304985-2	2.96376163063305	0	1.33874442434436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52845454-2	1.79536221942674	0	1.51061176642375	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-141134321-2	3.36836990631657	0	1.34112080328406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75572467-2	2.06395323516924	0	1.41637135858564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42448672-1	4.56200057304192	1.60970888602144	1.07557483657125	1.49660333366753	0.134496502197478	0.767731696873402	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.814777624442019	1.62128842389662
Merged-chr11-70482615-2	1.92893031928177	0	1.47711550469941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78360676-2	3.04141028786944	0	1.32212583951783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80656496-1	3.71481606711042	-2.31735036828485	1.15088918760868	-2.01353040174081	0.0440588599716246	0.339113105265699	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87915552998341	0.733321818366247
Merged-chr15-4731062-2	3.55370675222886	0	1.32456064944331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34751714-1	5.08284529068702	1.93502591865492	0.742683173500867	2.60545275252915	0.00917529271444847	0.103812142123661	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55384369687924	3.33301146174604
Merged-chr14-21068814-1	2.74449766958458	0	1.33627955962781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84391119-1	2.08693176298898	0	1.3923785872465	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46136349-1	4.65228073343984	0	1.33031865420725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12965347-1	2.60118587848746	0	1.36861240826443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100147909-1	1.58663751170151	0	1.56989912308822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131076716-1	2.58906352636556	0	1.41921658500901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104990922-1	2.65165380498132	0	1.39264912319109	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25582749-1	1.70515312803902	0	1.39439402540436	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100298443-1	2.51746887851617	0	1.39704271782283	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121789806-1	2.43171018024739	0	1.33996077349912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101527556-1	2.57851046322326	0	1.38363791762871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16201300-1	1.92539183145039	0	1.38404045878435	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-4541081-1	1.34372077865328	0	1.65225032400121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27754519-1	1.23108312056867	-3.16258605920783	1.34382635428118	-2.35341869069052	0.0186016755960643	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82530992005271	0
Merged-chr17-18555846-1	3.35112401389932	0.691415952615112	1.94258256947175	0.355926159063153	0.721895864857898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13907459577552	1.67113172082159
Merged-chr8-20321398-1	1.06292727743753	0	1.47984178605455	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55901818-1	0.908985793869671	0	1.7053703525722	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14526202-1	3.63903281731089	-1.38927707564719	1.18135278092272	-1.17600525269181	0.239592777063759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12964398892587	0.306240821987646
Merged-chr12-36117328-1	2.18575666375681	2.60111452580094	1.31069898041464	1.98452471899999	0.0471973752401751	0.355686735375906	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.648127181902715	1.69017997474274
Merged-chr5-100917579-1	2.93109418836931	0	1.3260796020514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-52953568-1	2.28525636314096	0	1.41790545264614	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103055018-1	1.96918403257334	0	1.42697300115533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-27185185-1	2.73164176849769	0	1.3317168664904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46511909-1	2.72712209136274	0	1.33786173316044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102017418-2	3.00662441430036	0	1.35368534374675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-124257876-1	1.56180960561918	0.183217684599381	1.58977999638284	0.115247194590603	0.908249191982935	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07093521121123	1.10669213789164
Merged-chr19-40391672-1	3.08045100580468	0	1.32608729501579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19416910-1	2.88328963557914	3.66457739199597	1.14288242346609	3.20643428996149	0.00134390994278026	0.0238185894008458	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.50690972966086
Merged-chr18-8757614-1	1.90748268275799	0	1.44307178672488	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-75638529-2	2.95351039996103	0	1.34586595963639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52262353-1	2.44541416398181	0	1.36509211507243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42888319-1	3.23216701301361	0.102272988623699	1.10135829962632	0.092860778057785	0.92601416563612	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81437670570351	2.03074619307863
Merged-chr10-100020633-1	1.45461609816475	0	1.55977842816908	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36494130-1	2.56420397957405	-3.54869282962569	1.12374588032268	-3.15791398372621	0.00158902436892229	0.0271179761799185	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17555662181075	0
Merged-chr10-76425884-1	1.71135272351628	0	1.48028106679087	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156482445-1	4.2888769551755	-0.384341320706503	0.786484772605635	-0.488682469252615	0.625066516930974	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34849980805508	2.30999519426894
Merged-chr15-27785431-1	2.00300021634306	0	1.40723749609871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139795048-2	4.1338443873297	0	1.39147737406174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-127488791-1	1.19320360811221	0	1.98235598909837	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122091253-1	2.00340204490325	0	1.42871552500233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75033408-1	6.25639597346283	2.37148914529562	0.86085908094011	2.75479366809468	0.0058729158920642	0.0736146207930143	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32197107161314	2.72355994982429
Merged-chr15-47801416-1	3.79585893433284	2.49979366572385	0.984042745777823	2.54033036313674	0.0110747803664821	0.120026772919122	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09274865947111	3.73421854905292
Merged-chr11-48856116-1	5.07824549407273	0	1.30303666051139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24067009-1	3.55702604151738	3.36617218842419	1.6332769937278	2.06099283915169	0.0393037232513883	0.312488271028741	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.36481542333654
Merged-chr5-140751276-1	1.4017595774564	0	1.40628934137611	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-80866458-1	2.5199961385465	0	1.43071452460693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-98713073-1	1.74713066789148	0	1.37570161282711	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63452743-1	1.96166870356711	0	1.41517592607212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17812332-2	2.7915797035787	0	1.36967952542052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82834141-1	1.7992702511013	0	1.42023626775176	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78849412-1	2.7031302723116	2.83620342903051	1.36824729886147	2.07287339897586	0.0381840632508853	0.305594096410576	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.655578355042913	2.61389506311823
Merged-chr13-107940434-1	1.53846091083749	0	1.66525631093965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27563617-1	1.67583410705805	0	1.36977693199835	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120936849-1	1.91053586093805	0	1.39792484841413	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-98799834-1	1.91003195939884	0	1.41173452678788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-31563797-1	2.45865347574721	0	1.34563000829683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-156134241-1	1.83672082436361	0	1.44497153885416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83574444-1	1.11899049899917	0.51873485813881	1.52103694124599	0.341040275927735	0.733073261504933	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.691422582374267	0.733321818366247
Merged-chr2-115856053-1	2.46225327867071	0	1.37148605014594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85391947-1	1.65538849655213	0	1.46000856873402	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157696349-1	3.17167091664103	-0.171365668422035	1.01533468983202	-0.168777517539941	0.865971643014777	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74025339635294	1.41959898789419
Merged-chrX-23600948-1	1.6652378842336	0	1.39472647026361	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66147421-1	1.43284626307335	0	1.73817715704837	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88921597-2	3.28738059106247	0	1.32749054367037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47703249-1	6.14042681068594	1.55230888420602	0.665505052951189	2.33252757033518	0.0196729542577876	0.18497106027761	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64443867012077	2.75421478449417
Merged-chr4-150582632-1	2.81317630274657	3.9816453010384	1.13829082362001	3.49791566304286	0.000468909387010285	0.0104908902862713	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.05572638891514
Merged-chr14-54493459-1	2.20767504583269	-0.877822428948584	1.33904267293784	-0.655559711941557	0.512107454765901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	0
Merged-chr19-59114454-1	2.0489767005609	0	1.36962347303564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32035914-1	1.13811980137245	0	1.75294291542845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102741678-1	3.1663042757566	1.06003972893407	0.867297751542975	1.22223276498549	0.221619616698224	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50509280415763	2.59083006002438
Merged-chr2-104670726-1	2.78585881590243	-0.385405780133534	0.954039915101265	-0.403972385256675	0.686233025980929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84961577540578	2.42760559021134
Merged-chr11-99133569-1	1.41815167019551	0	1.47249022921163	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113602084-2	4.49784223789615	0	1.31448069655065	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102774069-3	2.97962455108465	0	1.33963115791675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132328587-3	3.67774032339081	0	1.36101258091045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115984286-2	3.03641692020708	0	1.33183001724397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78589759-1	2.61341645455244	2.7285808643648	1.21369728629386	2.24815602306963	0.0245662427775018	0.219724295173643	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr1-128675739-1	4.15833950695758	-0.519264550731509	0.812064267767482	-0.639437753072261	0.52253819565885	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28603165133445	1.46928333126936
Merged-chr15-33185412-2	3.38641142675709	0	1.37611643093673	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34522438-1	1.87603993255622	0	1.37660475916661	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32340600-1	2.2062258978084	0	1.35605477876237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36028150-2	10.5259933383447	0.990443082707421	0.58337223583741	1.69778920192469	0.0895475546465455	0.570162185124541	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4860503076504	4.54340337101687
Merged-chr2-30436337-2	3.74362625791478	0	1.3244789914452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12389240-1	2.18161240547873	0	1.37850955373225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-41017663-1	1.37891414110245	0	1.49659688686126	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50392860-2	7.8256934852721	1.13860413145449	0.614548567165621	1.85274881805661	0.0639183692933378	0.444268648352571	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30666964144621	3.8664307006184
Merged-chr2-93192809-1	2.00442346020276	0	1.36424103048125	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139585260-1	4.42792410838761	-0.236684823087953	0.780732886109633	-0.303157235078628	0.761770037798538	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43195801542603	2.21307952544685
Merged-chr16-37854842-2	3.71087941028257	0	1.32052534403647	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3001352-1	2.18025679706633	0	2.40499264475412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61416863-3	3.2225001119735	0	1.31924865615654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-73568530-3	2.40296132685874	0	1.3967786166401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171166135-2	6.07274880804772	-0.11245218904342	0.746961233162777	-0.150546218533023	0.880333689091801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15348641991098	2.00209435585126
Merged-chr11-95689164-1	2.23341915325319	0	1.39691637140764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99279729-1	1.57882434157853	0	1.40198174453453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70923857-1	2.71085044082285	0.16571480520808	0.855188479680752	0.193775768904116	0.846351460991566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45701335815348	2.30039026721351
Merged-chr3-15582442-1	7.10692597035407	1.00098595185962	0.889182376237506	1.12573750741125	0.26027664272179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09057042955491	4.48750699431214
Merged-chr6-48830591-1	3.67930025122904	0	1.31505378724166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60114432-1	1.66652602559082	0	1.38129321065096	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82780567-1	2.75994189618419	-2.96564032439928	1.13140304043405	-2.62120589958954	0.00876193255175171	0.100114922980725	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10938895278229	0.306240821987646
Merged-chr13-63845959-1	2.25277452765283	-2.11505105581018	1.32057959878312	-1.60160815581215	0.109242286164582	0.663303636745709	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.288948126371	0
Merged-chr15-62223604-1	2.86443831779646	2.15790325026996	1.22923199758989	1.75548900004302	0.0791757005600249	0.521343745344154	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.15658857927843
Merged-chr10-85829436-1	1.72350201655008	0	1.37397999915138	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96966362-1	2.04839637567814	0	1.41457109447897	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37047279-1	1.07002439795526	0	1.80151676175137	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42458083-1	2.30726407070578	-0.571270008647953	1.23916761168725	-0.461011087814113	0.644790650169203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71355907979954	0.735627456805112
Merged-chr7-125582325-1	3.05046022802788	-3.20676851182534	1.29541206765009	-2.4754814254915	0.013305668270258	0.137292309930251	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92527602355255	0
Merged-chr1-8697128-2	4.20412701707787	1.16078257117514	0.921490032041583	1.25968000826162	0.207784820078915	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37971469579802	3.00865537380463
Merged-chr1-152585138-1	2.0487671926755	0	1.53276342481869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74348981-1	3.6007986423983	3.11587630911107	1.15924751376253	2.68784385743298	0.00719150159826181	0.0856453186513607	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.32852444445417
Merged-chr15-97593911-1	1.32672456361619	0	1.43260525010628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76075568-1	1.77256819542628	0	1.40751840239841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154517924-1	1.41390835133418	0	1.51935424555439	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108664988-1	2.19889124124991	3.11502397173337	1.23376471701699	2.5248120073209	0.0115760195575078	0.123961543149392	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.07982873328226
Merged-chr17-31288843-1	1.52737255673687	0	1.51055990885823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132411847-1	3.22143288603964	0	1.3553958347123	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21449486-1	1.61911937814387	3.86890961276657	1.66053229399453	2.32992133110499	0.0198103093842407	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.92797716160218
Merged-chr1-135771046-1	1.94555694770462	0	1.46791721743596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140158769-1	1.16417565850918	0	1.69785522937797	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4344544-1	1.92266370007333	0	1.40901661932745	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136548569-1	3.01451149438495	0	1.34360624080278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115898092-1	1.16844885883421	0	1.69928208330297	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-147054752-1	1.71369834552533	0	1.43707203980287	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103962516-1	1.39550794199927	0	1.500154668087	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111131922-1	1.4101530635391	0	1.51585059786658	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-78276598-1	0.95689733029102	0	1.78709648703968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133457670-1	3.12592112145943	-0.743479047109335	1.17704049801104	-0.63165120347657	0.52761482021829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81860121875525	1.9450324219075
Merged-chr1-40354802-1	1.5181884764821	0	1.38615050485719	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69204873-1	2.30874951253914	0	1.34621266875151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128701176-1	2.09553871999833	0	1.53549848989978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50975137-1	1.10108181133799	0	1.55581017065271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16194386-1	2.3900520850117	0.684956291018225	1.16218128329597	0.589371297630671	0.555612226328494	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36621932775951	1.72220530150145
Merged-chr4-133962831-1	2.82454944636541	0.206606282945408	1.15336113137652	0.179134078065234	0.857832424337715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06395628120059	1.42436654726916
Merged-chr12-17733577-1	2.99837050159082	-0.922893246587057	1.15632956281792	-0.798123023282401	0.424799102012301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.11926049440706	2.12216108640681
Merged-chr6-47799262-1	2.9723159545363	0	1.35653865995893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51704812-1	1.0785918718161	0	1.47676501856899	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43494178-1	4.41435225718539	1.20886527889864	0.78024341977545	1.54934376664983	0.121299103942585	0.715533138921296	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47012572522629	2.38206134385925
Merged-chr9-65124021-1	1.0053852304135	0	1.50092710711946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5850435-1	1.93976666814989	0	1.41725838559845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71258762-1	5.16145241011224	1.92209387073251	0.705971750255268	2.72262150721684	0.00647662116921893	0.0794632532714571	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45730825486182	4.32651383310632
Merged-chr9-41054547-1	2.32775213067481	-0.52717408401529	1.21943081594938	-0.432311597443814	0.665514959256552	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58177183192247	1.35032549026822
Merged-chr18-34163206-1	2.12862560426803	0	1.36945469386582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133857623-1	3.37646548199337	-0.213855226167018	1.04970111979598	-0.203729635163753	0.838564782340741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0742296748262	1.45575152610536
Merged-chr7-25652562-1	1.62092320060037	0	1.40115919996801	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-128354246-1	5.03512540307509	-1.30255660325725	0.727824943640847	-1.78965644780101	0.073509157908222	0.493964994241826	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80383622683284	1.20440436174322
Merged-chr14-55458471-1	2.33338338038801	0	1.42317393045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46628082-1	0.987041540944054	0	1.46624133373598	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81742004-1	1.69069156324187	0	1.4977038514132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40205563-1	2.52941010897768	0	1.44524790640304	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123361774-2	3.76274100951358	0	1.35556134380919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52064587-2	2.91710731781069	0	1.36260259715275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80159020-1	3.48963532307823	-0.777356122220406	1.05160012606807	-0.739212655980688	0.459777876958345	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44950448360819	0.733321818366247
Merged-chr18-36720581-1	4.85039828968894	0.65686681339369	0.742128143504912	0.885112388126732	0.376096018644982	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64092928124254	1.95040317292908
Merged-chr10-80535353-1	2.14192044154124	0	1.37092166082321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57684810-1	2.12173530726932	0	1.38841540382712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134270828-1	3.03339137075686	0.749438086131557	1.29333760452643	0.579460524080234	0.562278475621988	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44120277065608	1.88513399620689
Merged-chr15-98978067-1	2.01995748022829	0	1.387345267289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56177901-1	1.81569509080079	1.51193432796399	1.58478125534524	0.954033449641363	0.340066710881122	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.89544522622072	1.45063110846411
Merged-chr8-23262031-1	1.38687315957669	0	1.78816350792916	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82165450-1	2.57555356329813	0	1.41246815583345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-79288961-1	1.22828431468459	0	1.52587848329285	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108854597-1	7.09907800695919	1.6475913210255	0.612844992101982	2.68843074881703	0.00717887245092045	0.0855572860072676	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9868380130075	3.07640642364671
Merged-chr3-65385978-1	1.56951425925663	0	1.55240521653555	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57436530-1	3.12629177302632	2.86441184407441	1.08265034478206	2.64574048110707	0.00815123253451939	0.0943412046051548	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	2.01243752527112
Merged-chr5-31821351-1	2.01424816955572	0	1.36056030742159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-106498352-1	3.16161400309916	1.9195645454652	1.2699101190055	1.51157512389023	0.130641984026379	0.752882184336163	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.683637474991079
Merged-chr1-10266992-1	1.33764482857237	0	1.46323611106546	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50137036-1	7.53931295379472	0.848215625378377	0.619418526400455	1.36937400033464	0.17088239712394	0.909989497389044	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95507246041478	3.4826808895428
Merged-chr1-178391548-1	2.37124399314261	0	1.36461144916412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53070811-1	1.9533215988758	0	1.49578452839674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122343915-1	2.77352834342142	0	1.37824999758059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-32347801-1	2.04061674357618	0	1.44220717232564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33621526-1	1.69028350737749	0	1.50954706072886	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50161706-2	3.44445689593095	0	1.3261830196887	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87723791-1	1.77760010761249	3.12097395511076	1.27528770361895	2.44727048355772	0.0143942770078107	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.20275690226768
Merged-chr19-45644660-1	2.45826213061772	-0.560444651852723	1.20593548297085	-0.464738503648682	0.642118731433217	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31153080129432	1.2679693671925
Merged-chr18-75579054-1	2.89157647123874	3.03187777978894	1.13251272391881	2.67712469427963	0.00742569932193893	0.0878898293590692	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	2.4360226934973
Merged-chr8-70038186-1	2.3647801322746	-1.96182579519283	1.3817906158086	-1.41977067491141	0.155674454938128	0.851343454045266	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40186185063337	0.382164212378408
Merged-chr16-37533567-1	1.60262525216066	0	1.38271129766155	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-108105716-2	2.97683268158426	0	1.34070822045624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45911812-1	2.28422173054513	0	1.34510917126942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86079496-2	3.76756104381867	0	1.32382816925375	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114380856-1	1.72647871112703	0.0747799550975945	1.50916526988731	0.0495505406794701	0.960480560997579	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr2-137571081-1	1.85586831840772	0	1.43987164613021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99440380-1	2.20708204489128	2.44522088841453	1.34144746680417	1.82282269632217	0.0683302490528562	0.467012703128119	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr3-127795146-1	4.8037194766455	-0.859979033026828	0.973731366917401	-0.88317893645484	0.377139600277378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44716094883049	0.961728545204858
Merged-chr2-151941430-1	1.83544145429629	0	1.50240162483992	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192742118-2	5.86281528118933	0.503624357337881	0.985728925391485	0.510915673026299	0.609410106001629	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27149725724741	1.7337995627857
Merged-chr10-79850156-1	2.79481914461349	0	1.33906557874429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-55459062-1	3.10263092509315	0	1.3611125526536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145305695-2	8.98324739841092	2.30844578388674	0.582312202878646	3.96427513020507	7.36193061901569e-05	0.00248616391850232	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63495168950321	3.76658960558365
Merged-chr11-17154207-1	2.03122651477251	0	1.38196562417581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-93494209-1	2.33657608403818	0	1.34651163641898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-28174441-1	3.03081618911045	-0.327256679877702	0.868454996256246	-0.376826296455714	0.706302697124394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68177220318521	1.57132087663558
Merged-chr7-30271445-1	3.61818977375479	3.38750371755567	1.63703425010019	2.06929312404328	0.0385185884931556	0.307630858429938	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.741231840258805	3.50652811557187
Merged-chr11-75325607-2	2.41933716299399	0	1.38826747558558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118157904-2	3.27666023624924	0	1.32987038961331	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-39629297-1	1.51250116355026	0	1.60150109549528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-90490150-1	2.02115261317575	0	1.35338567815233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47074625-2	3.02539194186094	0	1.35599657706349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-82021652-1	2.3107318315898	0	1.41338196742612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75538003-2	3.10851199906657	0	1.34062818024165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137338651-1	2.92878545674215	-0.420012960580702	1.34144294935743	-0.313105347329079	0.754200626637079	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0
Merged-chr6-117828445-1	2.46793493214222	0	1.33055253971269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87215537-3	7.93081786050331	1.32342909159319	0.60241061243666	2.19688874045582	0.0280283931887138	0.243103714004472	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06613734829171	3.581379703232
Merged-chr14-46872867-2	6.62442147843053	-0.066797621645376	0.852035803468076	-0.0783976698789968	0.937511726995254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37992136239315	1.24876900881727
Merged-chr2-19528973-2	2.86661243350903	0	1.35877977522108	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121961943-2	6.71133332407451	-3.86262027724262	1.07922723707196	-3.57906115094192	0.000344830780968893	0.00831487535542187	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64089359781558	0
Merged-chr5-147052125-1	1.3528750080134	0	1.45629792311853	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-43096488-1	2.01848383633859	0	1.35322850518407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25530700-1	2.99945607260029	-2.25965723617013	1.1030322406277	-2.04858675289875	0.0405025410900578	0.318953850333926	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89321839913525	0.683637474991079
Merged-chr19-21849445-1	2.1284205921463	0	1.59127938193578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32911006-1	2.6455879981372	0	1.33247310940662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-10462257-1	2.44625871855381	-2.0177665790741	1.43954732184609	-1.40166741895397	0.161014584216263	0.871587907103329	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81798857930295	0.609949614787909
Merged-chr5-123713029-1	2.68741874043803	4.93964049600074	1.17746659998396	4.19514277183577	2.72699761445849e-05	0.00112570048082378	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	3.15652556329347
Merged-chr7-98962722-1	2.34546319414594	0	1.43301625934548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16526316-1	2.39199128435268	-1.80359009673359	1.26282784908573	-1.42821533278614	0.153229888696459	0.842348416226223	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857370518835178	0
Merged-chr1-79766439-1	2.85986561910482	-2.24809940622094	1.15201384811687	-1.95145172073736	0.0510033340428035	0.37629715099481	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16564701642449	0.469435083901436
Merged-chr12-102162998-1	1.7698788089777	0	1.42469218100062	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94381833-1	1.89989482687676	0	1.38853274996751	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-63659874-1	1.18065453519902	0	1.52853736707594	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87523699-1	1.46559576926541	0	1.45468655194258	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-82784945-1	4.10690985733989	1.09741624951382	0.817873291726862	1.34179250088572	0.179663284400183	0.943145644474159	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93971832755038	3.09906948643778
Merged-chr17-23200094-2	5.1877033685124	-1.14543983873048	0.748325073325417	-1.53067146827028	0.12585060871415	0.733943228651035	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24585302693591	1.31734301959449
Merged-chr16-89906016-1	1.25169005205487	0	1.48432348319434	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99184312-1	3.59222294772279	0.740685379278074	0.933232822943328	0.793676948633272	0.427383523164423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68813178472365	2.39912876297954
Merged-chr16-33667345-1	0.906705155176591	0	2.03055286825644	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47244386-1	1.99723452332355	0	1.4497942520988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84015808-1	1.40562509190937	0	1.62468987604742	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3381473-1	2.80277964153042	0	1.36575919584055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67982564-1	3.67589901714576	0.0337920576515216	1.08522155521339	0.0311383951868492	0.975159169573857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35518451695628	2.37850366884776
Merged-chr1-156585606-1	6.35835808082625	0.323457587806996	0.689622365455578	0.469035814395772	0.639044036599095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3396308285073	2.49084597027501
Merged-chr8-31230039-1	2.80817922793167	-2.31022272300352	1.17155713648035	-1.97192492885495	0.0486181770258815	0.363584732883183	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79400582196912	0.420961122473315
Merged-chr15-63923239-1	2.2652087982477	0	1.53244361289337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75331299-1	2.8070940382175	4.22345929775198	1.16805144962328	3.61581615186053	0.000299402818219427	0.00746462287652296	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	3.90027688847863
Merged-chr1-172321155-1	4.36281187680611	0.294876335812961	0.807685981852201	0.365087846562281	0.715045832736526	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.83007163890149	3.0879850761916
Merged-chr5-64327394-1	1.09785234646779	0	1.6873652267065	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92986889-2	3.06963894195407	0	1.34120760078104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-16219249-1	4.02026106814506	-3.19523045705067	1.12256440042359	-2.84636717131327	0.00442211736499641	0.0591812909371322	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67645528446954	0
Merged-chr3-87411379-1	2.18103778420512	0.0952947256480531	1.430428672177	0.0666196976484134	0.946884464125087	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr9-111497271-1	1.86998462156723	0	1.37819728428387	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34621583-1	3.84162334637472	-1.17345763588864	1.18585385052212	-0.989546591573636	0.322395786049513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00007294210979	1.27663763006505
Merged-chr4-59850373-1	3.12392573252458	0	1.34887586029261	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123860605-2	3.21712776594418	0	1.33930263136478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-5469360-1	2.65218325234345	0	1.33120678260988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79339202-1	2.70378208329265	0	1.34916350579102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-89585783-1	4.7247073718723	3.80452319361431	0.814232452808168	4.67252709038194	2.97516260178962e-06	0.000191920015179215	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03855222268227	4.41295010315655
Merged-chr5-9012874-1	1.77218826951992	0	1.37523862467582	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24741766-1	3.72736115114229	0.695624656388553	0.68386712546118	1.01719271257475	0.309061762088164	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2531106728472	2.96432250261784
Merged-chr3-10260018-1	1.40956294354848	0	1.45453078497655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74738435-1	3.38365495300531	-1.9545305336725	1.0609451542419	-1.84225407492351	0.065437994002479	0.452115791508352	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52060368204037	1.07938469868934
Merged-chr9-55589240-1	1.16922193303037	0	1.70274849579697	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105410219-1	1.80609154955483	0	1.545891026112	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20852772-1	1.32630559693038	0	1.68788311887118	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65026375-1	3.91403050586761	0.0407512946776013	0.738472423946167	0.0551832314331238	0.955992487955806	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18836558206914	2.18317309328714
Merged-chr17-50033388-1	1.14774432267918	2.04838262909557	2.44148013467067	0.838992134323418	0.40147372350979	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr2-68970680-1	1.42603909793014	0	1.63218991591301	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11094712-1	1.12052981341092	0	1.57388843780644	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83779190-1	3.78853146734897	3.05447519146866	1.05182476868979	2.90397724259098	0.00368454941045268	0.0516453380041701	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	2.05402110133586
Merged-chr11-114205362-1	2.04486627690792	0	1.41354009479477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-19401210-1	1.56112580103728	0	1.42414080207106	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57786668-1	1.46222231510689	1.55665147617879	1.6406507613632	0.948801239628468	0.342721711295601	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.58492111464609
Merged-chr2-6674580-2	3.0223595031183	0	1.31452345098975	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22693191-1	1.21113246693711	0	1.60872113240865	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48580946-1	5.98053810865406	2.89192188889804	0.974230311932772	2.96841707086774	0.00299337863058654	0.0443076976537123	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.667447567553467	2.35461024226286
Merged-chr1-152602007-1	2.52755947441652	0	1.36887275551249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55525669-1	1.38597388218153	0	1.48226972296585	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106723043-2	3.37352975219092	0	1.33509958751099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93781148-1	3.29586995095832	0	1.31868220994481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61231878-1	1.48009382387821	-2.35652880192287	2.32553754771741	-1.01332649057242	0.310904238311899	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26670233121615	0.563523181795778
Merged-chr6-136703227-1	2.5339662034731	3.05215202707729	1.25272347854161	2.43641320639296	0.0148337288180843	0.148339202781229	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	2.47759419528723
Merged-chr16-22114009-1	2.98114590939526	0	1.34144444837102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-85648733-1	1.31010414176201	0	1.76767629381785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54927632-1	1.75639053989012	0	1.43987492590853	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-9882089-1	2.33502216087958	0	1.4135773526713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-170174671-1	2.74911910924529	0	1.36504347934155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146303659-1	2.91316108515674	0	1.36082856273733	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135794671-2	4.16199923491248	-1.05495776549222	1.21124066690382	-0.870972874605434	0.383768964092924	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.765888511628843	0.382164212378408
Merged-chr17-9764921-1	1.10934554299779	0	1.60356130184173	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-102132665-1	2.19031185237859	-1.60076829097546	1.11277407762757	-1.4385384447383	0.150281337477132	0.829976696989576	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15769979258433	1.42539729206526
Merged-chr10-94623807-1	2.11031255899755	0	1.46230096056366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103802706-1	2.31242881242547	0	1.3702905036253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110567713-1	1.65797232983337	0	1.54583656176927	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69709834-2	2.74634735426676	0	1.42686135990985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148934536-1	3.12385070235325	-0.294823963916875	1.0311961913252	-0.285904822377198	0.774951020131019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29014418030098	1.19133112147929
Merged-chr5-28094120-1	2.6734772546664	0	1.33063847087989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98031576-1	2.68675671034957	0	1.36721610039658	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-28945309-1	1.9210880384998	-0.96629927812911	1.2773917041289	-0.756462778806025	0.44937178062015	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83199144783754	1.00443616959195
Merged-chr3-14824896-1	2.09663367842455	-1.29646991301798	1.1459183782227	-1.13138067916214	0.257894899962422	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04786969989093	1.03956264035389
Merged-chr7-35546053-3	3.7181141142325	-1.76951422782487	1.18275497051884	-1.49609536373256	0.134628805923835	0.768269491913276	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0
Merged-chr5-92353351-4	9.67019426588619	1.21193842449301	0.440783017337917	2.74951251936256	0.00596839828637214	0.0744579905347984	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07166668683118	4.35953274502709
Merged-chr2-51991666-2	2.84349476100525	0	1.37869348586786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105706277-3	2.6614455579461	0	1.35914481236421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59853562-1	8.37258190852836	-0.632734955591501	0.629479408202463	-1.00517180919124	0.31481412713858	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89461702891459	2.1506673546956
Merged-chr5-122970253-3	3.64312522971128	-1.62113381039191	0.832918273780824	-1.94632998389288	0.0516151140892036	0.37936530876702	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.35195424151419	1.41926493179619
Merged-chr16-91741072-1	2.17082714753008	0	1.36173703233476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38337404-1	2.52929466870289	0	1.37457076465994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-29821152-2	3.08417402470976	0	1.3571548616843	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73791983-2	2.16977524379586	0	1.40019975254689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124912625-1	4.06268378262569	0.901272459518665	0.853008941823976	1.05658031859723	0.290703166725994	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06314443009015	3.37050276895449
Merged-chr7-30341481-1	4.79890867899436	-1.82352821130628	0.814338244662306	-2.23927615245734	0.0251379535527324	0.223704849905604	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58128208035204	1.35700371934843
Merged-chr1-59883985-2	2.71831129259499	0	1.37929207653882	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59046932-1	2.21110658540432	0	1.35264266915555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23730034-1	6.12321680421647	1.02770015153225	0.738433491605473	1.39173014660787	0.164004129765259	0.882494553988851	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39304610017828	2.58638522975775
Merged-chr16-10978530-1	2.69176163373297	0	1.34174259940579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-160268578-2	4.78097899146823	-0.554684603726018	0.805131937295251	-0.688936282405362	0.490863365740995	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3135970527372	1.428339764855
Merged-chr9-62040349-2	2.93785279081437	0	1.33498971952714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33115007-3	2.73293021267057	0	1.34508366627532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5866825-2	2.36343154194197	0	1.41514511379248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45516734-2	6.75975515512922	0.573294308873477	0.545784956975818	1.05040327980106	0.293532738359482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8111906284214	3.32607339166763
Merged-chr11-85706691-2	2.45172801264558	0	1.40834442030352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105092824-2	3.84880763973714	0	1.32613859095141	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3002740-2	2.17571980422891	0	2.40103315434187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81359431-1	1.27918697598241	0	2.43324932234636	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9411105-1	2.02029201576521	0	1.45057771628093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35999533-1	1.73576978593191	0	1.45549035901248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124280180-1	1.3480422368991	0	1.53986048525776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-118419694-1	3.02864149987012	-1.04054241728969	1.01359885481396	-1.02658207667439	0.304617297290826	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01223569497413	1.11812572528152
Merged-chr1-173870999-1	2.27730713651453	0	1.52785357108106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113128893-1	1.70429801144273	0	1.55923577885705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-31118228-1	3.09277741890837	3.68012692765233	1.17637273443993	3.12836809279199	0.00175779891000392	0.0293622514246207	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.26514550294121
Merged-chr1-36613243-1	1.83805709665387	0	1.44997003847638	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159199610-1	2.19670386028369	0	1.37672351210093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-15989100-1	1.32660703203648	0	1.42911095967285	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-115597737-1	2.9153649651512	0	1.40590329364943	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133277176-1	1.73958238928285	0	1.49139053042058	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32907433-1	1.2299963565071	0	1.44817448263864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51673662-1	1.9925178632451	0	1.3895685522216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105470897-1	2.47568119283739	-0.807043561530494	1.37578746047529	-0.586604824303084	0.55746914187131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82149838420583	0.989878296978726
Merged-chr8-46242106-1	2.69681601846579	0	1.34171144567849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42436520-1	3.68815241616062	2.9511354983058	1.1510502217383	2.56386336805447	0.0103514284622789	0.113895343373645	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	1.88787614081909
Merged-chr10-20395992-1	1.04429700016363	0	1.67038464733714	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138090397-1	3.16297628334312	-1.18140032476837	0.891350707069025	-1.32540459708962	0.185036993097846	0.963690711004372	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69485246069008	1.60308582214967
Merged-chrX-142716227-1	1.12998163031897	0	1.54247836075273	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35721982-1	4.58549087762835	1.45813842970674	0.843374848163358	1.7289327905405	0.0838211245583455	0.54322872214516	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11547928615571	3.07620191520932
Merged-chr17-8936818-1	1.30729787846111	0	1.43892896350671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43771705-1	1.2364277171252	0	1.56947866308442	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83706096-1	3.46322231372547	0	1.31166425412537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72866186-1	4.58009705897941	-1.26134729972169	0.916040540880106	-1.37695576061495	0.168525925858434	0.900449317346298	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75763055872062	1.31470332505763
Merged-chr3-89448985-1	2.39570123499686	0	1.3557941323083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55481755-1	1.41581808874019	-0.952497291426072	1.62897365909746	-0.584722341031474	0.558734429446745	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14126094015715	0.683637474991079
Merged-chr14-121280940-1	4.30467639132592	2.31393784299404	0.855771598106764	2.70391988716755	0.00685268084733858	0.0828458008059853	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25475668404501	2.8914038803831
Merged-chr11-51565273-1	1.41586042841907	0	1.46322209746672	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25615967-1	2.72774485978375	0	1.37643111511834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27326016-1	2.02688054749892	0	1.48999425896707	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45767857-1	6.22845492188383	0.0577657154976548	0.594694460930047	0.0971351160851819	0.922619094102722	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97009744526607	2.5392607781143
Merged-chr12-69531943-1	2.60370165147056	1.05358905682185	1.14787347107159	0.917861666267345	0.358691292866873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.942222610012176	1.40918939303534
Merged-chr6-83518816-1	2.17140127509706	0	1.3854227645138	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53623989-1	2.57432830180188	-1.64345613369125	1.42211016065729	-1.15564615116149	0.247825922454426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.97234876436263	0.306240821987646
Merged-chr4-3799349-1	1.60098388416965	0	1.45403363974307	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29620984-1	2.94609060222731	0	1.34768722821212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45587440-1	2.11955062451937	0	1.43130381585394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26489604-1	2.34488519769373	0.613138201846039	1.21391348026382	0.505092176513919	0.613494096043016	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	1.27911570690487
Merged-chr17-71097343-1	2.42851082502173	0.112215033285725	1.2983153880376	0.0864312587832282	0.931123598982759	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0.61242769162773
Merged-chr10-56754846-1	2.07623773569413	0	1.34636488854607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-105596508-1	4.11978355397965	0	1.3311196173525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-79119569-1	2.51787473312893	0	1.39526737644096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-26202922-1	5.09416393609982	0.780662077452935	0.807968035868002	0.966204160062184	0.333942031646481	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60623798699552	3.6288623365984
Merged-chr5-143516891-1	1.30243969313513	0	1.50496943314651	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117487638-1	3.05004836956241	0	1.33869852696894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76954684-1	1.90298553022807	0	1.37931010141248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72082620-1	1.56757683472896	0	1.45196638032179	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112113886-1	2.41166159236615	0	1.36047170349059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55531619-2	2.60514389337182	0	1.44306540713832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42900745-1	3.15754597455601	4.20662691627462	1.34363370984351	3.13078399675203	0.00174340339812889	0.0291739919216723	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.69334296600841
Merged-chr2-93199688-2	3.70115680574557	0	1.32990385224908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92365393-1	5.70613685101075	0.0910715952606111	1.10184649247895	0.0826536145300217	0.934126968849351	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.11120361966283	1.0991499147123
Merged-chr15-23591016-1	1.14694324222808	0	1.56897414809896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-160794489-1	2.14056634450648	0	1.40037107357706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17735542-1	1.73274779867168	0	1.43353305041699	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13469388-1	1.2221829946922	0	1.56992252847061	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46825206-1	1.66611734330494	0	1.47780486401402	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129490782-1	6.47867595709959	0.615460950137724	0.464749654163024	1.32428490182767	0.185408442895721	0.965348966014234	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.22671361286303	3.94646460166749
Merged-chr15-68238331-1	4.3475750857716	1.11815923376689	0.885061743494897	1.26336862030839	0.2064567359049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9780771756637	3.14105961353458
Merged-chr5-7912200-1	4.16275693346545	-2.07053226819311	0.862834429087534	-2.39968665875183	0.01640911138745	0.160447372845175	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.05997541513666	0.666688015277142
Merged-chrX-48020089-1	1.39169823071917	0	1.53364070343945	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88203526-1	1.39829883026467	0	1.48985527635402	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44655629-1	5.51431342476079	-0.417299080512797	0.736577573074185	-0.566537858016983	0.571028204950579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21101831301098	1.84231959469675
Merged-chr13-63701715-1	6.23980214674305	-0.61759458262962	0.622817225874367	-0.991614484911822	0.321385620608241	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09101208851528	2.21307952544685
Merged-chr12-16637383-1	2.34353469696577	5.34499278282462	1.40257247648843	3.8108496155626	0.000138490000066842	0.00409944153627751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.04135148958867
Merged-chr2-59019195-1	1.41774835190953	0	1.49082523332813	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39084400-1	1.44406467150047	0	1.41551204545106	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19086767-1	3.81455116335759	-3.94716466349198	1.16123642634472	-3.39910510378723	0.000676067306150649	0.0139100422505417	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88132870689674	0
Merged-chr11-51815482-1	2.10338691557164	0	1.37895903560231	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-26962408-1	1.27022260178027	0	1.44148179938538	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157048771-1	4.29144270512731	-0.0225719072131685	0.708520375446519	-0.0318578095921989	0.97458544461498	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27844572577688	1.7414873742332
Merged-chr11-118276458-1	1.35788450126395	0	1.51980976435472	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116336481-1	2.4234042148812	0	1.35944695534938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38186910-1	4.06187786676751	-0.869934927292622	0.830994239580551	-1.04686035817977	0.295163987486731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16637977701132	1.6950503635711
Merged-chr18-75372032-1	1.90908676330579	0	1.50369092118746	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81052998-1	1.68011083337779	0	1.39337862108955	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-74098605-1	1.98448819100372	0	1.66704533777816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99496019-1	1.83904896406604	0	1.38925568142405	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4601347-2	4.12488404603064	0	1.31243579396116	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12219552-2	5.3126091747632	-0.701828948251063	0.901210866345583	-0.778762190359494	0.436119814027128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71598451414733	1.47321675069518
Merged-chr10-122868646-1	3.65506283777537	0.403488303366544	1.32318932147285	0.304936184730858	0.760414755956912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.635744023561357	1.20539659680455
Merged-chr10-125500630-1	3.4947050153551	0.15094944398622	0.830446066075268	0.181769111990157	0.855763925727502	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7506702533763	1.775524153257
Merged-chr5-25089759-1	1.99057314943067	0	1.33722037613033	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7580831-1	3.13923939624275	0	1.39342736142578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37234408-2	3.01359691163488	0	1.36929843712701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91347889-1	2.10969376464092	0	1.36048140864604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44637837-1	2.96756555454989	3.68563462762382	1.20484039937913	3.05902311171096	0.00222060018065695	0.0351094457791456	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.10380936944073
Merged-chr13-46737608-1	2.16389610274853	0	1.3901330587957	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-100536864-2	2.54004168038337	0	1.37230706974468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98779113-2	2.61468373011381	0	1.33405114590439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32010561-1	3.38147497535124	0	1.32477581256529	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3773795-1	2.71313326131675	0.751502552618992	0.98677340560791	0.76157560423512	0.446313339672002	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11502330727233	1.31470332505763
Merged-chr13-8785440-1	2.1917596301614	0	1.38218269040711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21129643-1	1.53065787261289	0	1.39394235128834	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19932849-1	4.15232488337511	0	1.32018506330773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-119669151-2	5.84710720396677	1.75546197823756	0.81360675762887	2.15762954495803	0.0309566457142311	0.262815768590639	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73070000426956	2.75966343139792
Merged-chr11-3387286-4	4.44218441310742	0	1.30696922764487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95136046-1	6.68333762212108	1.19758779498735	0.653350680155087	1.83299387505509	0.0668034819500614	0.459364446123194	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09507772775744	3.77393743086353
Merged-chr14-31380007-1	2.37711160987176	0	1.36685308004802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104074524-1	2.04629413622739	0	1.34442474967435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191313343-1	5.88303632167101	3.30457580473009	1.06444271918596	3.10451257279235	0.00190592827172148	0.0313065726298651	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	2.20833117574159
Merged-chr15-37607713-1	1.12178704258227	0	1.92564347642979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-7693038-1	2.2366131007462	0	1.42447001617594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21048067-1	2.40609823981384	0	1.37417095310257	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73005270-3	3.0803485701855	0	1.35487162197579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58462073-2	2.20465470760817	0	1.34249565561879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-31057383-1	2.46398915254488	1.08542815228225	1.38231994118971	0.785222089285685	0.432323366416969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	1.10459859746439
Merged-chr7-65469803-1	0.982741696095853	0	1.55240183285009	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-20827680-1	1.6952839290254	0	1.47088908768489	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108778334-1	1.65792080536455	1.7342588961166	1.40480631677347	1.23451815058734	0.217009887520611	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.581381506691384
Merged-chr4-117188867-1	1.8626146363887	0	1.41634953863867	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123515155-1	4.65551224639248	2.52375543810393	1.19310877146832	2.11527691226176	0.0344063530415909	0.283576677164432	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892597230197813	3.48783557935705
Merged-chr15-99024876-1	2.74053555055175	0	1.33251368147478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126721807-1	1.54476914550453	0	1.45838960380235	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63500111-1	2.40123783409665	0	1.39285661879564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114792174-1	3.63873281135814	-0.350708029142557	1.26983884888292	-0.276183099494141	0.782407437254784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02393427419834	1.26501898168246
Merged-chr6-122934546-1	2.35235364392684	0	1.38487927495436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52435675-1	2.10703548672983	0	1.41601146085042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-122033545-1	1.84588409768792	0	1.40220472794698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20640218-1	2.02158728739731	0	1.45895798133939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-22653590-1	5.51073993519378	-0.468303362421671	0.604670852540073	-0.774476494864014	0.438649062949876	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88527497898998	2.06058072325202
Merged-chr2-165901717-2	2.44807001573486	0	1.38337332849172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5792077-1	1.5736905139385	0	1.64407781838592	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-5274712-1	4.78475252289895	-0.961813580797964	0.697862532739928	-1.37822785387506	0.168132950003127	0.898570029517	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13994603349295	1.92738623187092
Merged-chr11-105447944-1	2.29141446523335	0	1.35480845985491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70836000-1	2.34485505621535	0.749452641950193	1.20364016469864	0.622655062476948	0.533511218967325	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736114785973883	1.08186277552917
Merged-chr4-85560640-1	3.53852374355323	-0.00703722495698929	0.914492201066782	-0.00769522686883515	0.993860157886218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54111641048444	1.76302217368042
Merged-chr12-112632200-1	1.70823212142943	0	1.35476376657553	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113610376-1	2.2446245023178	0	1.4318369657603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117476153-1	1.14607686094625	0	1.55837200833924	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41091720-2	8.57743226319286	0.627622563749405	0.726023860755615	0.864465477892424	0.387332236766061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27352658518752	3.16499380193367
Merged-chr8-24428525-1	2.48883578175495	0	1.35353726846981	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-107581462-1	1.7868873472422	0	1.42250551187417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67786338-1	2.00304231165706	-1.63877899349854	1.28564094772499	-1.27467859233827	0.202423027062097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51347856020393	1.14490468848716
Merged-chr5-65157049-1	1.97718166793228	0	1.39126718379918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88219364-1	1.13630108902352	0	1.5986157971564	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-96758336-1	2.59709071458607	1.22526561414533	0.931272145536003	1.31569017716096	0.188278052471634	0.975594133439967	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61107392557921	2.48834673140933
Merged-chr15-50824099-1	2.1309563946667	0	1.37080375822848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125311574-1	5.70295577350436	-1.23838993782248	0.718912351366394	-1.7225882062935	0.0849630192475869	0.548290880481218	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.45910986674526	1.64536602019594
Merged-chr6-34277888-1	1.61857281505071	0	1.40326752057532	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121736332-1	2.90635328808868	0	1.35650134932471	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67111692-1	1.44350031956863	0	1.43725649551703	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15294596-1	0.863558296452362	0	2.02268348838111	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59970758-1	1.228416787337	0	1.58663208702113	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-18263659-1	1.05723869483986	0	1.59950845895451	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122712224-1	6.41734947437476	-1.24218656733345	0.899021727222234	-1.38170917311589	0.167061016672603	0.894304021912667	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76461707475374	1.93871841517079
Merged-chr8-123028532-1	3.2000385319846	0	1.32817386304485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-33925489-1	3.28014250718427	1.90131564027222	1.03785746728805	1.83196219153332	0.0669570537354151	0.460129943568665	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50800425527701	3.64253033803887
Merged-chr3-61308974-1	1.97858550175922	0	1.66627772008888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54992989-1	2.90467664928561	0.0163691003241974	1.10000352154205	0.0148809526548153	0.98812715582085	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75290668798335	1.94792243194202
Merged-chr1-157004878-1	1.41760932887615	-1.07452836663715	1.2972691613257	-0.828300246911806	0.407500483051862	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8467340027647	1.15307255889252
Merged-chr8-91477696-1	1.90235213687726	2.96301265998171	2.19976529750808	1.34696763483734	0.177990656658063	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.69453213775868
Merged-chr3-87488553-1	6.0436816086835	-1.09714958672184	0.746881860099885	-1.46897340173064	0.141840003730282	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78811559150077	1.69686753743604
Merged-chr1-172527486-1	3.05711445946808	-0.485315852013082	1.07771552261135	-0.450319070135632	0.652480390322003	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36487608160425	1.20539659680455
Merged-chr3-69169954-1	1.61436879818347	0	1.5347358012531	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37505391-1	2.48503154877652	0	1.38115910774677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103694526-1	2.37821619615161	0	1.41439677949333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70906236-1	2.45466142513931	-0.98238849376278	1.16712599959058	-0.841715885095011	0.399947004467147	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25600643607087	1.96491903277391
Merged-chr1-131974835-1	1.40045287022563	0	1.41377063315271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24380805-1	1.17060916957844	0	1.50966325144776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97463576-2	9.30412163772583	1.50674471481326	0.513673224695731	2.93327477932252	0.00335406901627236	0.0482445507236041	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2400433982909	4.02688438609257
Merged-chr1-132526083-2	6.56768943118034	-0.762429006142724	0.788534081772673	-0.966894169531313	0.3335969416222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40425413035783	2.17543988140679
Merged-chr9-46933398-1	1.29624271707786	0	1.63666845369053	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84028944-1	1.82009546669478	0	1.45446608411157	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121366744-1	2.55664781026738	0	1.35802445802454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37331375-1	1.91999093075226	0	1.43179801306915	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146481610-1	0.971373543491635	0	1.73749666525296	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133206481-1	6.74513055549151	2.50974882582918	0.793523444039861	3.16279102360473	0.00156264460195257	0.0268082368493548	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77147180770878	4.01698060445131
Merged-chr19-37614349-1	2.47398272529801	1.54788563347948	1.18877289743346	1.30208691401136	0.192886676030905	0.99262661300327	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25581833895147	2.18885111947556
Merged-chr8-61686528-1	1.77873525511282	0	1.41726486907808	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66814991-1	3.05007212612451	0	1.35312441746297	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-173961074-1	5.13842059960798	0.920588113326168	0.562268527354042	1.63727484029442	0.101573055498036	0.62848147756601	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0277976742499	3.92353235484762
Merged-chr4-122897960-1	2.20464911480493	0	1.39709984063547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76144622-1	4.83818989571525	0.877103970537665	0.746523156091919	1.17491863900022	0.240027267836291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07947321179646	2.90512073759599
Merged-chr15-72980945-1	2.42586368445708	0	1.38251299317315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54050061-1	2.2621990234872	0	1.35867035944915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7264260-1	2.0176642919572	0	1.3540657354093	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-18731210-1	2.51420079663721	0	1.33870672399522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155550646-1	2.13241001054648	0	1.39584362514601	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90056263-1	3.243488088823	-4.37892926903055	1.06764855536519	-4.10147070122035	4.1053249459653e-05	0.00156514914771907	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18184408217221	0
Merged-chr11-95421236-1	2.53149709555952	0	1.34407866614249	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-108140563-1	3.10522695586821	-2.23925898382324	1.11890304425645	-2.00129849973847	0.0453602313348886	0.345382987299529	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15663240023502	0.563523181795778
Merged-chr7-84102744-2	3.98702878192382	-2.01975175299055	1.14236482187757	-1.76804442355896	0.0770534773627721	0.511181373781493	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14855119822055	0
Merged-chr16-44050550-1	4.3860113951613	0	1.30954293478961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53491537-1	3.162582856379	-0.865927734944267	1.28999614338764	-0.67126381685938	0.502052480665387	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	0
Merged-chr12-100194357-3	3.01979923981931	0	1.32807035057505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-131812958-1	2.62995159672431	0	1.39480161046866	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22186590-1	1.98567538911387	0	1.41684642331245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-75154024-2	2.68880864033762	0	1.32854099199043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91661102-1	1.44752133551796	0	1.42653501182444	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92286685-1	2.30476144489598	0	1.37331392548861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54645310-2	2.56654820795426	0	1.40508957303095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57448095-2	3.77841596612719	0	1.33924526962849	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-68413995-1	2.17720565298985	0	1.38863121434196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42713366-1	1.77039611537803	0	1.3640033397784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16728830-2	2.67866814020429	0	1.36640968693275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96300256-2	3.8094484266382	-2.52774231223023	0.999122336893778	-2.52996276721113	0.0114074631199564	0.122576499809971	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06544906667129	0.683637474991079
Merged-chr1-30905204-1	1.10294830255459	0	1.62598310610588	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-7441817-1	2.43673701107204	0	1.36659820583493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102896684-2	8.4955046279644	-0.455875331602939	0.570402064491685	-0.799217534405654	0.42416428638762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.67178664663849	3.21915892870393
Merged-chr15-78340230-2	3.36516474004291	0	1.33267620116087	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78956468-1	1.13525804583742	0	1.50991763848596	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-78489752-1	2.13285969201205	0	1.40370444966629	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-44202294-1	1.41046939599093	0	1.67737942040996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-23180136-1	2.44025929359678	0	1.37297567365306	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98842889-1	1.62981624044281	0	1.60985586894921	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4_GL456216_random-38951-1	1.31013066713693	0	2.43325318626531	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-42188981-1	1.92425669281621	0	1.35315509857756	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44259701-1	2.2932161505324	1.15576829635024	1.06501226917466	1.08521594520776	0.277826023630532	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43188652134116	2.09435135007647
Merged-chr9-121424505-1	2.84527650785352	1.5849856338747	1.34576326468951	1.17775962196471	0.238892450151363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.808340254822995	1.11051826775391
Merged-chr16-93744145-1	1.74673156551078	0	1.41000556261933	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45081517-1	2.07945373124267	0	1.44178041653053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127932080-1	4.45858818338775	-0.0186395835774567	0.908296698990402	-0.0205214701299423	0.983627384994975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37999142938206	2.17061528449483
Merged-chr16-10972612-1	2.19564635501349	0	1.37104077803415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-38466620-1	1.87446319241449	0	1.36430695606453	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38189081-1	3.79761020477125	0.942474130523149	0.92562411486989	1.01820395059136	0.308581042405428	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51138180588083	2.08364730863447
Merged-chr1-33878850-1	2.04750858182423	0	1.49555928518521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-66457167-1	2.24290571885651	0	1.38647156739633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134838437-2	3.17056916949727	0	1.32248052396081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102166849-1	4.30440358394578	-3.69732467580263	1.12188374922212	-3.29563974731452	0.000981978500721	0.0187846507927736	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24751976135589	0
Merged-chrX-74095430-1	2.8069148952051	-0.6599931864289	0.879684564934263	-0.750261187631751	0.453097413416513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72232244077232	2.18277730432996
Merged-chr10-77916851-1	2.54899848234985	0	1.34085986058388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10664648-1	2.61708597036328	0	1.39749547320518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-157629970-1	1.39333373247068	0	1.51186303705691	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36030279-1	1.15702950182591	0	1.42794592104138	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107628893-2	10.3690750652988	0.711534573546239	0.598645233875739	1.18857469045504	0.234607072297698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8144417108132	2.92373086661702
Merged-chr11-32625868-1	1.79957917960657	0	1.42404586154084	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-117329697-1	1.67020514673042	0	1.44034494747768	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93659209-1	2.28704043098641	0	1.38822542978582	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41071391-1	3.16857617436667	0.610327853054058	1.23252915981094	0.495183297040758	0.620470739865189	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05013768095364	2.43561848564824
Merged-chr17-8210830-1	6.08022023487751	1.37504152926037	0.630101141244663	2.18225525912268	0.029090699037551	0.250291088783121	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13122070142215	3.56229169659444
Merged-chr7-143696385-1	1.53114614931449	0	1.44187831208221	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31812972-1	5.93331965116158	1.87423050915696	0.687627017459147	2.72564989677461	0.00641750291790224	0.0788978757736496	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28585652158312	4.3406717990305
Merged-chr1-155809204-1	3.06477146755544	2.35492225369586	1.37995850079996	1.70651671940186	0.0879119160930407	0.562157947843804	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	2.31193049927473
Merged-chr2-154677924-1	1.82375763927246	0	1.47952798096516	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90812889-1	3.75404523528491	0.388332554235506	1.09721271359147	0.353926407728535	0.723394035824569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39712074580427	1.40646071772112
Merged-chr1-23062202-1	1.52660688819644	0	1.57632094067872	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99936958-1	1.88208349972889	0	1.45317068226961	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29844695-1	2.15752475037393	0	1.3897843082632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-12246605-1	2.27036353406369	-3.13816932063215	1.38619596356094	-2.26387134512398	0.0235820288284127	0.213079543116905	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69957333784632	0
Merged-chr4-132930886-2	8.76108913624447	0.650646780344174	0.599403127995294	1.08549113268772	0.27770418894291	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8949011174057	3.47385819476835
Merged-chr5-125270794-2	3.57141003009912	0	1.3252275334332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96349231-1	1.24786618697965	0	1.56876663997083	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-70707266-1	2.78723374056821	2.772402886109	1.34943159638009	2.05449679223911	0.0399276335304462	0.316015493243271	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.08186277552917
Merged-chr7-84251909-1	0.806484013668955	0	2.43325129459144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84193821-1	7.19317119356331	0.709197370901196	0.692560048950154	1.02402293054048	0.305824444274574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39101670096789	2.42667607911247
Merged-chr11-104565376-1	2.5181976786141	0	1.3879474263266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-72970166-1	3.31941564875785	0	1.33795420013049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-23236168-1	1.89798442189266	0	1.43946838931221	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-15998327-1	2.51333989296817	0	1.38264255836314	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113220780-1	1.76529008193584	0	1.47212934467516	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20729582-1	2.25390093772225	0	1.39414956623799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17366281-1	1.67749143397622	0	1.44275193053042	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-97699345-1	2.13757065642585	0	1.38885579912746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112353592-2	9.1690069676934	0.687695159419321	0.530642729296213	1.29596642232601	0.194987053366332	0.999813558480565	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84246034167546	3.67582304793678
Merged-chr11-116096991-1	1.73004405164844	0	1.59699202130084	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-11122822-1	4.20483859208578	2.5831909673665	1.12669540184855	2.29271457319193	0.0218644429741976	0.200991334389836	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36012598814313	4.03816134842255
Merged-chr14-20848451-1	1.60180347738773	0	1.37649539953183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64267326-1	2.44688567190529	0	1.35909202032052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-48917934-1	4.62631595844448	2.09234818356895	0.980740386442222	2.13343736272476	0.032888864833111	0.27496875145656	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31318749610353	4.46168291124897
Merged-chr6-53376609-1	3.00874485927482	0	1.368852545526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75559951-1	2.23964169942523	4.57657036383972	1.4594637446635	3.13578900508757	0.00171392463649689	0.0287617152790257	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.22737493777144
Merged-chrX-140539299-1	4.34037127557498	-0.7192432564454	0.715734143102018	-1.00490281674725	0.314943647997005	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02294714100355	2.08364730863447
Merged-chr14-51219312-1	1.14630716969834	0	1.73587795820602	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58965727-1	2.72834455220203	1.49222054161588	1.22023950972731	1.22289151410066	0.221370674105035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62720277002388	2.77338891294954
Merged-chr10-99178847-1	1.60654409631398	0	1.54573865799724	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-30669620-1	1.75058985058011	0	2.07826763117603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43965068-1	2.68727191839472	0	1.35236331016607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39329112-1	3.77275010417685	-0.284521557039235	1.10556929261449	-0.257352984512068	0.79690629369013	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96542332143827	2.6028508856621
Merged-chr18-57707164-1	4.70326457684507	0.348167525250343	1.44175676069223	0.241488394396831	0.809176610296205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23864270160817	1.0995156753045
Merged-chr10-18911164-1	4.9855957014107	0.198752504210522	0.593007388488283	0.335160249381023	0.737504205949617	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98414776000046	3.0237869060369
Merged-chr19-11813772-1	4.11088134355167	-4.30620481751969	1.07481518424146	-4.00646072055518	6.16353696190142e-05	0.00215877225413477	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.16920646673029	0
Merged-chr12-34847937-1	3.98940912004028	-0.221248724898765	1.09563498181641	-0.201936528652969	0.839966344560662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752776503073505	0.581381506691384
Merged-chr1-105167289-1	3.33733522839518	0	1.35320325227042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25394453-1	2.19300379865104	-0.130301634946407	1.0321796651264	-0.126239296654279	0.899542505938548	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85704964653867	1.56104072393284
Merged-chr1-165471693-2	2.81121996528273	0	1.37457292159976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-80668772-1	3.4560497451617	4.36464496583133	1.1560189613229	3.77558250501066	0.000159634174006441	0.00458525482840654	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.83659484082797
Merged-chr14-34490122-3	3.73410333091657	0	1.33051439494366	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156780869-1	1.8995822813186	0	1.42219943516683	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119112870-1	1.75534032557224	0	1.58085716538168	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33195187-1	1.93075266201993	0	1.38267484276134	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123760382-1	1.99352023270434	0	1.87442457365308	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-33501290-1	2.39495914988682	0	1.36368866900517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34004009-1	2.87156472844238	3.76443761205237	1.24568094878034	3.02199179953596	0.00251117351044284	0.038674321049587	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.87496859647037
Merged-chr1-60637202-1	3.14037215476163	-3.62138558466445	1.17942371446731	-3.0704703833262	0.00213721881499287	0.0341046888118495	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28736529972301	0
Merged-chr6-145737763-1	2.38451413274033	4.47085407158257	1.47775083238901	3.0254451383761	0.00248267440138804	0.0383489681203452	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.71067116047657
Merged-chr8-72314829-1	2.63185520571498	-3.39578974036612	1.20020063857739	-2.82935171938517	0.00466424082604375	0.0617232646858353	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28603165133445	0
Merged-chr17-34136486-2	7.93415802734635	0.924411446292423	0.573662310274028	1.61142091738753	0.107088011138924	0.653692029508091	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60234808998388	3.17727526033188
Merged-chr3-87365353-2	5.76380003331559	-0.199086002338629	1.00236483160355	-0.198616308215979	0.842562895654227	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89683685293093	1.43116362910629
Merged-chr2-154950694-1	4.14402461189981	1.29927433777611	0.862282634145577	1.50678476676448	0.131865835437314	0.758063242938922	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47960971678528	2.90289326052054
Merged-chr1-138126507-3	2.36596167792339	0	1.40770466437875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36546674-1	2.8509749761847	-0.442794197965157	0.953223688124738	-0.46452286434075	0.642273182133097	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75518862909714	1.26501898168246
Merged-chr3-20520963-1	1.81291870989046	0	1.39352059946954	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-74820110-2	5.66437574034317	-2.38285873824516	0.945039148256011	-2.52143918338465	0.0116875876881751	0.12477566812448	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69921592822488	0.683637474991079
Merged-chr1-120510487-2	2.82730002836291	0	1.36836061002543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72831165-1	2.37482077391769	0	1.45500038800137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143731123-1	2.25803464464676	0	1.35776681799475	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30214098-1	4.65136245419458	1.5296940207214	0.96210894601893	1.58993846492235	0.11184867624171	0.674822496415089	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17267789052377	2.87208269895305
Merged-chr9-71834934-2	2.73194843611897	0	1.35802551343209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-88087922-1	2.50274509866837	0	1.33944425679878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84842676-2	2.42913168216406	0	1.39219481994273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-55379907-2	4.67227185554422	0.127204484784934	0.596129973859778	0.213383809509393	0.831027607847888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97618501500492	3.29398433573242
Merged-chrX-77446920-1	2.36316789936036	0	1.34222423417751	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143748591-1	2.25978797369377	0	1.3265924855242	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-6369635-1	2.53830271438822	0	1.36761639878182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44496909-1	1.78599831102673	0	1.35740749662896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-66385274-2	7.08723561812078	0.754960981410743	0.585572392900747	1.28927010658904	0.197304199693336	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87592600402958	3.43894955054282
Merged-chr18-58564564-1	1.80693154638518	0	1.3451497839389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54698928-1	1.60441851537108	0	1.37862908104254	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65054700-1	2.09424128199175	1.93787961986702	1.41186811925895	1.37256418884517	0.169887871185924	0.905726754549676	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.61242769162773
Merged-chr5-114918982-1	5.47999146121928	1.16372410849063	0.774129308850629	1.50326837543258	0.132769851711111	0.761451529744974	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03587522262136	3.77467330795492
Merged-chr1-91095143-1	2.07448567023345	0	1.37947635032448	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97441903-1	2.20135975201605	0	1.41812904086977	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127603602-1	5.23178758019873	0	1.31615867025729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-14022074-1	1.46585101568444	0	1.44971230137046	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8581958-1	1.23937886793793	0	1.65501476136605	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108041914-1	1.04109142943364	0	1.73539313477011	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10334686-1	2.95564821280917	0	1.32246582785265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-134137956-1	1.27753924728994	0	1.591981423443	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96379750-1	2.48875013021031	0.721326335450543	1.03550998177205	0.696590422253726	0.486059151475252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57721972864473	1.54028618764495
Merged-chr1-153492764-1	2.81672968863328	0	1.36449639608222	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49362976-1	2.11752236403724	0	1.39746339765517	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-46295905-1	2.86074560045942	-0.447809426114553	1.76522808018053	-0.253683606748855	0.799739999771065	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26562733901443	1.55698213282952
Merged-chr9-66624528-1	2.43144995218339	0	1.34921976930543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-9015603-1	1.67717076845428	0	1.40618325855374	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23397788-1	1.47845403705161	0	1.42354012871662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99306020-1	0.927320284244372	0	1.55618063267614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52066017-1	2.1584390344706	0	1.36560190790333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181208174-1	1.71926531720762	0	1.45059377713933	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3903642-1	2.56506941507076	0	1.39861864016252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48578246-1	3.8275359299663	2.81020456925919	1.06466343376086	2.63952389097493	0.00830225712464136	0.0958006876332004	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	2.42522159281154
Merged-chr6-120457317-1	2.41520423841935	0	1.34064500154534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27029927-2	3.32248381928342	2.48954700603263	1.21568035148117	2.0478631599165	0.0405734095184129	0.319357988242618	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr9-47735012-1	3.93968190432663	0.670802432377719	0.780994263584184	0.858908270720497	0.390391126004821	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42926060753214	2.98809146232286
Merged-chrX-164004985-1	2.47025396546082	0	1.37899044706599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-29697380-1	2.77738751755754	-0.665161396319252	1.04294600831479	-0.637771649746311	0.523622336865239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83320209409346	0.905469781553611
Merged-chr2-84429922-1	2.319381951086	0	1.35492953172399	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106890205-1	2.28782803904965	0	1.34724654724979	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-75120257-1	3.67574216955774	-0.653274293148592	0.912751504374711	-0.715719766023419	0.47416440328795	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69371423524044	1.15307255889252
Merged-chr5-125268263-1	1.83411135757093	0	1.47936826942057	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-19112925-1	1.30623921212515	0	1.52878764913707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35948981-2	6.92922952070667	-0.0714642809814911	0.688829317424181	-0.103747443922285	0.917369774968607	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71229754023919	2.59989886154962
Merged-chr19-6302688-1	2.80800290006822	0	1.37342489492838	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-88467008-1	1.23323793812077	0	1.49412661548508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27756278-1	2.14954244631285	0	1.50290305882676	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93391458-1	2.57631979685707	-0.104536112419094	1.22116911602461	-0.0856033051010988	0.931781771016081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07462854732366	2.31742847155177
Merged-chr13-44508869-1	2.66733017973797	-3.2001998927226	1.28598046831835	-2.48852915853957	0.0128272718108905	0.133771290098061	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47458165497394	0
Merged-chr17-55664972-1	1.9629733707454	3.94058558289582	2.23471275461042	1.7633521689828	0.0778411116023731	0.515149551223045	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.09810261449694
Merged-chr2-17081516-1	1.01822965583235	0	1.70621677215311	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-47210767-1	4.15824926678585	1.65087229906624	1.01164495607622	1.63186925328955	0.102707032408537	0.634116944422548	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4265766566232	2.16681072052159
Merged-chr17-73052151-1	4.30280185634745	-0.813037385695538	0.917935818648091	-0.885723564957902	0.375766506742082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83115957096832	1.04220233489076
Merged-chr7-88034207-1	1.84957526531142	0	1.41638602328667	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123422667-2	3.10487328190436	0	1.35423124547212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97672411-1	3.17745336293092	0	1.34710915153032	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28722545-1	1.53865548111759	0	1.4639405379898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59615187-1	1.82521951726871	0	1.42125177194472	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26463732-1	2.45288013879029	0	1.48963705534641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59472302-1	3.51832909910741	-2.21762967807277	1.31254279596896	-1.68956752106177	0.0911107239837307	0.577975086830489	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13581414496892	0
Merged-chr19-57573269-1	1.6063089973832	0	1.39550150939937	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167242658-1	2.86285647198082	0	1.36227142708076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47439106-2	3.58919883503617	-3.85436690295711	1.07153762687878	-3.59704298409404	0.000321855312578183	0.00789487884974998	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32116453026687	0.306240821987646
Merged-chr5-64999321-1	2.39311181988825	0	1.45161887246194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40381564-2	6.08500038470457	-0.880641794402616	0.613471950180848	-1.43550458035287	0.151143364054741	0.833680616824605	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.36779337923865	2.15271387927268
Merged-chr3-142640274-1	2.00413295482295	0	1.41773727443391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94589119-1	2.25649129159271	3.13303895891076	1.20694748074992	2.59583702595252	0.00943608106298202	0.106056097891576	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.898973605861379	3.15989595070923
Merged-chr6-72431369-1	2.28680142530962	0	1.4032093432351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11560420-1	4.79321526354553	-0.355569599876944	0.778976936610102	-0.456457159597417	0.648061270504159	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77165782138669	1.5737989534754
Merged-chr16-91314297-1	2.57490176292854	0	1.34255594310579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-154997991-1	1.61364806244982	0	1.55883995736244	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38691251-1	1.48416844705498	0	1.51415328161514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80717666-1	1.75023855144876	0	2.07450878428463	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-55931560-1	1.77288192920723	0	1.44160639236037	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-32189833-1	1.79088573247055	0	1.45915096434634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154703015-2	3.69230096747613	0	1.32969885169433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137975667-1	1.52154169332219	0	1.52142765773956	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40596571-1	1.09988703139526	0	1.49308082184129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133308323-1	2.69206950010899	1.91564256496047	1.14297248107066	1.67601809902372	0.0937346475212318	0.5906638646984	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	2.50724812564465
Merged-chr2-151876356-1	1.94227336350295	0	1.40523133391558	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65147155-1	1.98571483521009	0	1.37555879664055	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35055334-1	3.07155591194989	1.92242272436613	1.24571959290351	1.54322267652977	0.122776757097499	0.721165839936463	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.683637474991079
Merged-chr5-115569324-1	3.16728529682268	4.19563874118033	1.47244180793549	2.84944282250654	0.00437958769532557	0.0587656134576478	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.72298046804482
Merged-chr9-106424160-1	2.42479198479962	2.78073101281931	1.36561742007284	2.03624453814524	0.0417258059782099	0.325406637133705	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	2.07125680374983
Merged-chr8-83729571-1	5.52650810998086	1.42002362642091	0.692811537575337	2.0496535484825	0.0403982509570344	0.318439578653603	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48139844967663	3.30992332074145
Merged-chr5-8868228-2	2.53875930151643	0	1.52860629866006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13491535-1	1.39134905027949	0	1.61962896903487	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-50741544-2	2.92713038988099	0	1.36053735691576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148171001-1	2.01283134875678	0	1.37677856948264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48433625-1	3.12447604572554	0.242437127355851	1.43205050729218	0.169293698875376	0.865565632017081	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	0.306240821987646
Merged-chr6-29773241-1	2.67035778148905	0	1.34430968630552	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60216638-1	1.73028143631484	0	1.46502454335485	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42458599-2	2.93805963041276	-0.24547108181445	1.29103121111902	-0.190135668061568	0.849202820787668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51392626187497	1.46928333126936
Merged-chr18-42507621-1	6.16466705238714	2.82336358083922	0.870141108095766	3.2447192237796	0.0011756648334696	0.0215015377016245	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40752613795938	4.46468414995824
Merged-chr7-142038007-2	2.94241199340426	0	1.3265491560328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-80366703-1	1.99304325118859	0	1.43100498864635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-56068121-1	2.0927487636449	0	1.34837260499832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-51911941-2	3.50622484238364	0	1.32055786394348	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50262220-1	2.28166573963145	0	1.34941938228784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-21200168-2	2.74521712505548	0	1.32884010140804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-59232181-1	3.99434403608557	0.79542898285053	0.724804966228747	1.09743864889509	0.272449686121972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71664718652384	2.20491078807447
Merged-chr8-124827588-1	5.5871693821486	1.0043372710324	0.692636777347785	1.45002013158783	0.147052905383845	0.8170494987852	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12660284296283	3.21265900347339
Merged-chr8-6114686-1	2.06160864344781	0	1.43939786450944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-108967117-1	3.84875904625742	0	1.33616343798974	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-32951660-1	2.65391787888676	0	1.3224492492791	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33517811-1	4.63622919599017	1.54878583439555	0.799054886220752	1.93827215264368	0.0525900279816228	0.384472708188488	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36236847329795	2.58596880210664
Merged-chr4-123565256-1	2.67348673628003	0	1.39504111453593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56422494-2	3.31837181256314	0	1.3333795049444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99577482-2	3.31425716437591	0	1.30700839370787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106240703-1	2.24488835724361	0	1.34537713352776	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-44718689-1	3.30086842246834	0	1.39632052822187	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72532856-1	2.36813952808114	0	1.38094132447847	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148940551-2	2.71112160108512	0	1.34713397549585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65846772-1	2.27878190128528	0	1.3480094739653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45635016-1	4.95361751335377	1.59782710376506	0.80650960662459	1.98116313884009	0.0475729815072028	0.357815843642918	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75076859910296	3.7542575254542
Merged-chr2-102791926-1	2.10425390930619	0	1.37608461182429	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40330648-1	2.34379046367279	0	1.39747893999907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136510096-1	3.130860744155	-0.710062929234667	1.02692074540349	-0.691448617055327	0.489283660677293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43295259804638	1.40000983364339
Merged-chr17-42044868-1	4.22482226446918	1.79848416332851	1.55014756265744	1.16020191022675	0.245966609439161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67721275516459	2.77114081872451
Merged-chr3-139025623-1	6.88996278533181	1.73887676948605	0.771315509640381	2.25442992880668	0.0241691342341744	0.21709403904151	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42174431204496	3.08454404619492
Merged-chr1-64879120-1	1.05159687624146	0	1.69385079446541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73506433-1	1.82436486491481	0	1.38593873944637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-154780919-1	1.82768614387823	0.585022752714749	1.23829272639778	0.472443017909497	0.636610605241144	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43542760144534	2.03933265466087
Merged-chr17-33558841-1	2.34506348016119	0.103913474067961	1.14515111729857	0.0907421496588986	0.927697478181338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4944652178006	1.45327344926554
Merged-chr2-32130609-1	1.81896047785627	0	1.37582665617012	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28039955-1	2.22301088799037	0	1.34234291981908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97918227-1	1.7899001928016	0	1.43564412450272	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134547221-1	1.26131231695792	0	1.79688538335426	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73109981-1	2.30128519946952	0	1.44042443289773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11768283-1	1.68617103453977	0	1.39922291920079	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-138000910-1	4.58585574628872	0.68589110561102	0.821470034299716	0.834955722025487	0.403742639132684	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53052949521168	3.02820102564517
Merged-chr4-133183645-1	4.500131251925	2.18501484635523	0.868446137126343	2.51600502661612	0.0118693489977863	0.126301006287142	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32197107161314	3.55172589638613
Merged-chr9-40195888-1	2.31693303712241	0	1.35740556078124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45948378-1	2.89797805545056	-1.18808960561483	1.20173760273227	-0.988643113865781	0.322837784231717	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21025136108134	0.469435083901436
Merged-chr11-118238077-1	1.98097379295091	0	1.46554340122873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90895216-1	1.37330759098931	0	1.57709038927803	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57430013-1	6.47519001588271	-1.21523077638074	0.757241566583649	-1.60481255917229	0.108535061217222	0.659874591579886	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.53585722239968	1.75520908275751
Merged-chr11-61418102-2	2.27639271429532	0	1.34254492139403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119441258-1	2.44050002048202	-3.55496323239732	1.17880766986035	-3.01572794552521	0.00256363164307791	0.0392770012031243	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.40441865055537	0
Merged-chr2-11686776-2	2.66068630017964	0	1.43380335263107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-35447879-1	1.41815400825115	0	1.49938122562265	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-77806562-1	2.9353606839473	-2.18412404617947	1.26012904367684	-1.7332542703774	0.083050484840085	0.539518538856764	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27634025082531	0.892489746801999
Merged-chr19-29222079-1	1.42740010823434	0	1.46324746490958	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-73550494-1	1.45936270945832	0	1.42823142558257	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64611657-1	1.58497079425544	0	1.53635878981929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100414273-1	3.28232218047336	1.83706523441666	1.05861090167966	1.7353545400882	0.0826780268770412	0.537740454295525	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84906062149299	2.23836617526991
Merged-chr14-31408830-1	1.14055030389905	0	1.6049009386607	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-92641136-1	2.05164258575558	0	1.45020050771594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136570265-1	2.42609967478168	0	1.32973405548973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63409981-1	1.60056087580649	0	1.45170811342832	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52524978-1	2.64996136504169	0	1.33818461021094	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22142576-1	2.42822723977167	0	1.38328857201628	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117288839-1	1.34821950844034	3.51583657466641	1.4521026245254	2.42120392545638	0.0154691966364657	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.40343015234056
Merged-chr3-48303684-1	3.14727413671689	3.60690334931221	1.7503453787389	2.06068093367432	0.0393334897784456	0.312648853310097	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	2.709466364395
Merged-chr9-64794554-1	1.56716312312237	0	1.4156366800479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-22183437-1	1.41794947428655	0	1.46167480252123	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80615982-1	1.22430924826094	0	1.65441685754661	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123801728-1	2.88250182767363	0	1.35971602872155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-51972744-1	2.13702456223183	0	1.50024743703985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-85195586-1	3.17103517886413	-0.661210774922136	0.973826009115809	-0.678982455523534	0.497148978479884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84182820860621	1.53823966306787
Merged-chr16-91480652-1	1.53402977017462	0	1.50984934360187	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90865978-1	3.31656016556514	-3.6663978462002	1.11037921423947	-3.30193306861514	0.000960209797388473	0.0184655295527214	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81753100641573	0.306240821987646
Merged-chr9-37454648-1	1.30242065897344	0	1.49103003891104	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-67871054-1	1.28524914173887	0	1.75105871206598	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-27106330-1	2.49939011611154	0	1.3483542687338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78436177-1	1.64919581675249	0	1.39995650268077	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-97402698-1	2.16313085245509	0	1.41806704735956	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102140731-1	4.03263235755515	-1.68184821563655	1.00641314700106	-1.6711310068317	0.094695804081114	0.595228165975806	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79537260880059	1.10669213789164
Merged-chr15-38074708-1	2.46939891740569	0	1.37097382353059	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97489809-1	2.54006749386046	1.41919355328868	1.33513191149649	1.06296130072868	0.287799501539752	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.609949614787909
Merged-chr11-121677615-1	2.20355789311561	0	1.36460688547608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58697319-1	1.61309133500252	0	1.39060642918026	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30925743-1	1.40889120385954	0	1.40888957298294	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-113837202-1	1.21345154340042	0	1.54451163531275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39272453-1	2.00133816451682	0	1.37288232405691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70343863-1	1.44264935624643	0	1.46363550876408	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59500272-1	3.68082805827345	-2.92153979061422	1.09609529716498	-2.66540673805527	0.00768952567990724	0.0901470658556186	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8136615617722	0.469435083901436
Merged-chr1-55521305-1	2.23629175888686	1.28156209069216	1.38199357703934	0.927328543333517	0.353755978810301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr13-18791484-1	2.75003300754252	-1.4185291658259	0.981612603742953	-1.44510080699551	0.148429572354158	0.823015385815039	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48973898433818	1.29606516661881
Merged-chr12-102453072-1	1.85983388908203	0	1.40501663477894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34815416-1	4.39967804691445	-0.737791114139659	0.733813982494383	-1.00541980902538	0.314694745322781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60584301860345	1.6995072319729
Merged-chr7-39551154-1	1.88458501137951	0.146072905738871	1.99051690266537	0.0733844086143026	0.941500224264154	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	0.986577844696341
Merged-chr2-4517796-1	2.50446524572343	0	1.34622729949886	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42914479-1	1.62964008715245	0	1.39846728579455	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95301191-1	1.86861284139059	0	1.35700212748755	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70256709-1	2.20506976277002	0	1.51936882421157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25522985-1	1.47090743650741	0	1.49707645347936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106962315-1	0.709789266994648	0	1.90639428856937	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23981525-1	3.47928626975175	0.392971868276534	1.0589560293842	0.371093659578153	0.710567773336171	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62487361897984	2.07669635013709
Merged-chr11-26138140-1	1.33768097679561	0	1.69611246578187	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9019297-1	3.73723207084572	1.58590735903805	1.19794410799418	1.32385755600356	0.185550356708551	0.965902462317928	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85833232977186	2.94638558187799
Merged-chr11-82846245-1	2.18888127422497	0	1.37452529227564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-68787907-1	1.41101589239847	-3.27475661082722	1.3346707331282	-2.45360636862985	0.0141431704021429	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30004152852759	0
Merged-chr5-114700252-1	5.60373189184108	2.56537771700513	0.746703559804631	3.43560397338449	0.000591234544824102	0.0125356302939896	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.834140948310034	3.44740840526047
Merged-chr1-123570879-1	3.54473409161521	5.07028955752108	1.3475085832674	3.7627141084525	0.000168079304424902	0.00477120340006502	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	3.41366765099209
Merged-chr2-71816846-1	5.17222988496108	0.851862490326172	0.802771410648218	1.06115200295725	0.288620827924928	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86498731094744	2.35874323081915
Merged-chr13-113636511-2	3.24687522526721	0	1.33082084187803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37203093-1	1.60487157311702	0	1.49726991016368	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26818859-1	1.88219450035041	0	1.43025126983093	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130220571-1	4.48135899800505	0.210840759932768	1.39686359515721	0.150938689120206	0.880024080592243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.306240821987646
Merged-chr3-103852438-1	5.02161993682579	2.11132179901665	0.673563391469248	3.13455544905909	0.00172114722291022	0.028868091999048	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16721039910307	3.99663435844611
Merged-chr10-118172255-1	3.17301811162857	-0.851219894098726	0.929108866189821	-0.916168088664885	0.359578740025959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78856438439057	1.26514550294121
Merged-chr12-26187615-1	2.75790249903111	-2.12691561161525	1.2065168405324	-1.76285613276372	0.0779247572580829	0.515459615019252	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58993655847602	0.423054662900563
Merged-chr4-141387537-1	1.9456204713418	0	1.36624971363931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-60026894-1	1.4875484145026	0	1.38958337429832	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132816200-2	3.8006329209915	2.49026859332918	1.21482612861171	2.04989712904432	0.0403744704331204	0.318328926752255	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr13-93852513-1	5.22063055857579	-0.194168409378045	0.671087847916073	-0.289333818189371	0.772325935296457	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76296745878152	3.07454628738135
Merged-chr8-12677733-3	3.51564865366203	0	1.32263395103217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-89646892-1	2.62759683874978	0	1.34644744127483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-33672973-1	6.30030106507471	-0.166563261519228	0.768160244226779	-0.216834004064983	0.82833771092083	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25670674902347	1.5105912313833
Merged-chr5-64643227-2	5.10693116694754	0.221076649372637	0.677640102632352	0.326244932249206	0.744239048417327	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.50854126141782	3.83144630749374
Merged-chr12-56030726-1	1.40905887713844	0	1.46329087816953	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116418719-2	3.94745683283668	1.02814511724588	1.0779153645064	0.953827314370544	0.340171060780379	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05492522478848	2.12114437764854
Merged-chr4-6344577-2	4.86289070427989	-2.20811763388459	1.10536295702181	-1.99764034053932	0.0457556664384718	0.347466563519858	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97675906841018	0.727201944460961
Merged-chr18-79246392-1	1.60191643897951	0	1.40809648089954	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165844746-2	3.39418724534775	0	1.32147305366484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-4568759-2	2.02376428674251	0	1.35697767612028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25116563-1	2.52108756027063	0	1.33483214982295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136128089-1	2.76398250079412	0	1.4170175333216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-15542036-1	1.48516335940879	0	1.41519565657331	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89019532-1	1.4546934280891	0	1.45906317928038	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64246750-1	2.11356869584257	0	1.41208876229594	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-5047512-3	3.29068560742484	2.49701380997216	1.24018558434384	2.01341947648366	0.0440705183442147	0.339162889143923	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr14-70798372-1	4.45832434350409	-1.01930026889701	0.848898349779455	-1.20073300785875	0.229854785826989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.69274962821096	0.843323834477631
Merged-chr14-102884501-2	3.33855287136402	0	1.33947140878669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65881355-2	2.4474838461223	0	1.38174760315798	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49058691-2	2.73930734494548	0	1.33945863660223	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44435906-2	5.51467261094508	-2.54459304053054	0.899682858464633	-2.82832224332145	0.00467926792095162	0.0618845257159491	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0125791597649	0.683637474991079
Merged-chr9-106319289-2	4.87740380188892	1.43985103426555	1.34202637966163	1.07289324270108	0.283319018235633	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.609949614787909
Merged-chr7-139224179-1	2.64972423831394	0	1.46833940808645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160864257-1	1.74254419189261	0	1.3795356783685	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7239621-1	2.56158087935629	-3.90307665546339	1.32457404296727	-2.94666551574561	0.00321220457628758	0.0467037599185803	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80561104762682	0
Merged-chr1-181538396-1	1.16460249616459	0	1.5882316519981	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33295338-1	2.04679758236724	0	1.4098219545564	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-93203914-1	2.23590529144505	0	1.43195073247563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85837971-1	1.59440475954427	0	1.49615975998472	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36462024-1	1.66074434874245	0	1.40667688626807	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166592722-1	2.14533974238213	0	1.39944206063683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11490805-1	2.80273668915711	0	1.41520711997823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-61572498-1	3.12187828116444	2.27307090959243	1.26406426319002	1.7982241692808	0.0721414909442077	0.486798623217699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	1.57597341069752
Merged-chr2-84832619-1	2.10593169269676	0.547606473894795	2.11198814912053	0.259284823223478	0.795415488419905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.683637474991079
Merged-chr17-34299669-1	3.48155062661599	1.91134119573504	0.979336794903384	1.95166893113988	0.0509775235455202	0.376191671779284	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09428733769552	1.47321675069518
Merged-chr3-122251172-1	1.31916681755803	0	1.48499758868246	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99689955-1	2.43979746537009	1.04687547770702	1.17963761294489	0.8874551525138	0.374833901314516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.03956264035389
Merged-chr8-30885090-1	1.55665621703597	0	1.46001027245031	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-101444692-1	0.972536069684825	0	1.89679022979735	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-36645304-1	3.40008317296096	0	1.33947015412721	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76608652-1	2.17374425437086	0	1.42715040488699	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-58035651-1	2.57071387320309	0	1.33737221734742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94047266-1	5.08621181104493	2.26947185850952	0.938343061787712	2.41859502236397	0.0155805755956557	0.154238493087975	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.659012160579651	2.19127296633573
Merged-chr4-66858393-1	1.72669847040699	0	1.43290298195001	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121260760-1	2.32239489651351	0	1.36023002712836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91165294-1	3.31700669077059	1.56193584893103	1.18698861436758	1.31588107082495	0.188213963052364	0.975339383792213	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02064222773751	2.37816961274976
Merged-chr8-119380810-1	1.63879322105557	0	1.38539740831389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93123350-1	5.37284221997739	0.893225673901926	0.694530779818857	1.28608508054156	0.198413370372516	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27627544538518	2.45916162824808
Merged-chr13-112326496-1	3.89748925340469	0.237917940886055	0.937252244569784	0.253846221510266	0.799614363083845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26458834534505	3.26323214702659
Merged-chr8-89222655-1	1.59969564711496	-1.23114136654879	2.07695206539398	-0.59276349563477	0.553339441010194	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	0.306240821987646
Merged-chr10-10397025-1	1.80145059589846	0	1.38298241245779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-39561155-1	1.13305849091644	0	1.79874292799322	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-120572616-1	2.62037680912636	0	1.39260594674373	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-67261165-2	2.99861188725283	3.22679918955563	1.29026722939091	2.50087665256669	0.0123886318487699	0.130445945341559	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.898163539755574
Merged-chr5-36579197-1	1.6895348648611	0	1.39584154433363	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103327147-1	2.06625569457165	0	1.41195021982955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70286594-1	1.43792891132967	-1.07049715222575	2.43470294054023	-0.439682860032289	0.660166818233907	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.729467998682602	0.306240821987646
Merged-chr3-152274102-1	1.03435506969122	0	1.66580166739418	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114383259-1	1.5058889467159	0	1.48065190605798	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111981213-1	1.58311985390374	0	1.40510712794171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111588447-1	1.81716890445893	-0.422161472975601	1.205947353791	-0.350066254259359	0.726288975682768	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6796523670849	1.34805514843284
Merged-chr10-21997859-1	2.16635769093404	0	1.35571086771493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-11766404-1	1.34802443745218	0	1.70528460019089	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122631890-1	2.2145180426142	0	1.41261959368114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-51922491-1	1.80665587334967	0	1.44837126929482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-113217478-1	3.91585361685838	1.4173224445839	0.743200656643262	1.90705219635486	0.056513828681058	0.40577438182534	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.56048412532079	3.13178612559225
Merged-chr16-23958758-2	2.29670909383398	0	1.43846493068337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-47572491-1	3.25184411637627	0.0524663615904884	0.997173496946256	0.0526150782698912	0.958038602889854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90914887862077	1.00182956598795
Merged-chr2-21111630-1	2.53698929275057	0	1.34479252190831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106221061-2	1.86569873675226	0	1.47446900064007	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125095244-1	3.73133737306695	-1.06113369555782	1.24489556345517	-0.852387723683964	0.393998931527248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.46268455385214	1.46486482462982
Merged-chr3-65002786-2	2.57499118866651	0	1.34708765639487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-10589542-1	1.16378033356039	0	1.61896313153218	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-48598215-1	1.53259450121973	0	1.48693803142302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121307309-1	2.45843968392492	0	1.44309698258431	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-113629840-1	2.25660502670928	0	1.40158251485814	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-51850699-1	3.6581948978142	0	1.43209257196641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115799474-1	1.78396135965781	0	1.38747746004196	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104546693-1	2.50167384702822	0	1.34087113148936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58631121-1	1.57202280709907	0	1.46923823422295	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146800664-1	1.77141609162476	0	1.44128860869394	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135054610-1	1.58491313345339	0	1.50305301826621	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192752880-1	1.98030386727508	0	1.37823019174984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-84806669-1	2.71019733732955	0	1.35010497947303	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58121283-1	2.39669350404862	-0.982187196403507	0.995144059755216	-0.986979911878391	0.323652486542394	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73028564281846	1.82361065065357
Merged-chr5-115051027-1	5.94652339034357	-0.56968734984828	0.856049863949135	-0.665483839013997	0.505741076820715	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75891624025632	1.9027682814719
Merged-chr2-12881195-1	1.55939181198929	0	1.39407108895132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119464102-1	2.96925024354752	-4.08113259499198	1.16768199499683	-3.49507195664438	0.00047393396515315	0.0105662534585117	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78515693522488	0
Merged-chr15-62392031-1	1.9067832098593	0	1.3561521839467	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125403685-1	2.26931159676463	0	1.34846179893406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-87348242-1	1.18411036035091	0	1.90601491568025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29840000-1	1.95399160219984	0	1.4195174492869	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53579110-1	2.96656307245764	0	1.3146762640917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60581674-1	1.97334425696816	0.348229220023947	1.35146065582299	0.257668781198731	0.796662541687451	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.919077132026427	0.958904680953568
Merged-chr16-90676786-1	1.84250453582485	0	1.40891907762163	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-17051154-1	3.06335581534276	1.9237866751155	1.24263477367444	1.54815132802611	0.121585866629941	0.7165539358586	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.683637474991079
Merged-chr10-53443624-1	2.17300690252467	0	1.41252316922783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124167575-1	3.03377730364521	-0.314428087994246	0.935325819756418	-0.336169580003823	0.736742990994017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53835498611313	1.63379099656069
Merged-chr10-98518578-1	1.1440725456417	0	1.79931943146762	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123500670-1	1.39709075654831	0	1.60104858774868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104934204-1	2.45763235404718	0.786488059298622	2.16850635213079	0.362686536991609	0.716839057849435	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0.793480537552656
Merged-chr13-54838703-1	2.1939255631236	0	1.34277065833547	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113815978-1	3.74792115145238	0	1.31522997917385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-23886836-1	1.14117170117832	0	1.60159951539752	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92741054-2	5.61397048639326	1.65432485798166	0.804481268046514	2.05638704552908	0.0397452239680941	0.315078418709096	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03337619474158	2.15271387927268
Merged-chr4-141978707-1	2.95361945518395	0	1.34027136968437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-16170290-1	1.56959284168017	0	1.3814519301031	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-63130548-1	1.23430140304253	0	1.42990320676927	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70950027-1	4.50911236829469	-0.68038781909179	0.953759685007647	-0.713374479742593	0.475614060634238	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88047429398983	2.47834507100322
Merged-chr13-37801924-1	3.75750614880975	-1.836532276084	1.15705938285713	-1.58724115917805	0.112458036100945	0.677362019549181	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27919412398068	0.306240821987646
Merged-chr12-86798985-2	2.86605245666975	0	1.32697992418801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61770519-1	2.01694073727483	1.312218152077	1.45136110877516	0.904129333591153	0.3659268257588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0.773587911294612
Merged-chr1-74763277-3	3.8477057072739	0	1.31151375056379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57919372-1	3.29018508466678	0	1.37896160025501	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156460413-2	5.06465434927089	-0.0497481359988132	0.780340880577495	-0.0637518003183388	0.949167857910986	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88145911671964	2.60073253909927
Merged-chr1-120236557-1	2.08545327217024	-0.427195199802658	1.46201834005316	-0.292195513626132	0.770137141643285	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0
Merged-chr12-16868871-2	6.43049234317081	-0.0219508333092151	0.740460707628583	-0.0296448320391171	0.976350310213678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.27763962312411	2.65843931279771
Merged-chr8-84704563-2	6.38192241632734	-0.650571715325289	0.556204635564386	-1.16966251938039	0.242136806997853	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38755686841472	2.30406722002565
Merged-chr3-109354038-2	3.21381696881599	-1.02919108174475	0.8077863626338	-1.27408821113178	0.202632155912283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97693337099129	1.85144754364776
Merged-chr8-122893639-1	2.59515266583597	3.43829069088902	1.27402602508653	2.69876016909112	0.00695983129283227	0.0837992620767085	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.41695929335733
Merged-chr14-26436494-1	2.2136481131976	0	1.38993021857419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146769791-1	2.68554593611087	0	1.34357600882444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23311200-2	1.81755965177805	0	1.44035937379728	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-103087138-2	1.6325159825572	0	1.61838121641167	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157079561-1	5.48659803323791	-2.13917606873945	0.870050166880744	-2.45868129237732	0.0139448349958794	0.141923833552242	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2558619043282	1.19380919831911
Merged-chr1-189887687-1	2.00907004235491	0	1.39697035642478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13971827-1	2.37079585004395	3.8206487770961	1.29611879484702	2.94776126407999	0.00320084150804887	0.0465840064999914	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.58148496924487
Merged-chr19-55585716-1	2.1920619957019	0	1.37620139393012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-120698755-1	2.62917539607522	-0.67357566407427	1.17600667159549	-0.572765172463203	0.566803703291608	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10450937279159	0.609949614787909
Merged-chr13-108153145-1	2.0886012594125	2.45455327663137	1.29161416766274	1.90037655058634	0.0573837219589112	0.410756566450544	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr3-65434800-1	0.942581044655061	0	1.79507991597979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-126424482-1	4.3673216112265	0.518217695869589	0.813443031043968	0.637066980836398	0.524081215152023	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74482146524437	2.09093093088911
Merged-chr12-102464185-1	5.0146905205181	1.63392017128419	0.701814134777585	2.32813802161737	0.0199047759335849	0.186613699878916	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14810551176402	3.92015843729593
Merged-chr4-62600712-1	2.38319361146669	0	1.38902752708029	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129064707-1	1.41039700756799	0	1.56397604167143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75377634-1	2.23977972722663	0	1.34030603047353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40133088-1	6.37214238900647	0.828374431217986	0.67071655819454	1.23505886517523	0.216808597068614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86977852255074	2.73679482161042
Merged-chr2-61489896-2	2.60811482848972	0	1.34537283516274	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-143661017-1	0.890018988549689	0	1.69929946963593	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-56165770-1	7.00296704241537	1.51136546222299	0.705718885666621	2.14159701960556	0.0322259237811705	0.270881813146947	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46008260733449	2.66067886431113
Merged-chr4-138983514-1	3.30412809505118	1.0038078126099	1.14508884860691	0.876620022831512	0.380693059928588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9387925317664	2.8196274363787
Merged-chr4-3682086-1	4.83123937010079	0	1.30541731205618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67723418-1	3.55035791833409	1.33791001548866	1.04906278714629	1.27533836094606	0.202189505473296	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	1.56586581096048
Merged-chr15-79261537-1	1.88888707399058	0	1.42885348639743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37233897-1	2.71438107906274	0	1.33822854496827	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91060746-1	2.18169185448569	2.51356938858983	1.34071225943515	1.8748015250109	0.0608200333222598	0.427947227035252	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr12-79617522-1	3.9856675295744	0	1.3287060943602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-69813445-1	2.19329920685386	0	1.39402108204812	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64222406-1	2.39666403611939	0	1.45697242238421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52576962-1	1.8782465526926	0	1.39172373433101	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-34378004-1	1.7917142948642	0	1.4232617788201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45583786-1	2.03311548516578	0.369725954754821	1.32597335957555	0.2788336221726	0.780372510572842	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	0.563523181795778
Merged-chr14-121439443-1	2.73801924008684	0	1.35932729246096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166171856-1	1.2846636737313	0	1.58341850722745	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-90454631-1	3.93570852270355	0.6231664727961	1.27811399174685	0.487567209826406	0.625856426132807	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42704954440287	1.80720362046621
Merged-chr1-131438351-1	1.82351692831189	0	1.37575613205152	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-139584023-1	4.31725707360187	-0.506210122821311	1.13626230305249	-0.445504635207393	0.655955110819025	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4798717045852	2.41465620705893
Merged-chr19-59209325-1	1.54855290904118	0.85203777376556	1.61543492465941	0.527435528822184	0.597891176474026	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.609949614787909
Merged-chr17-66665525-1	2.65678624222491	1.69620939387809	1.48513546319867	1.14212436232908	0.253402330167382	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.958904680953568
Merged-chr6-113981142-1	1.70549597716145	0	1.49375279934778	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79442213-1	1.24721657500316	0	1.55782254004099	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95045358-1	2.26306840729604	0	1.36056667936801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54247782-1	1.42395042828476	0	1.46832373820301	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-29973377-1	2.47314763483901	0	1.44931374835706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-14758963-1	1.86502312401531	-1.32595681828773	1.50018329024233	-0.883863209857204	0.376770059368452	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57475019955021	1.15307255889252
Merged-chr6-53586658-1	1.76362490467265	0	1.43699125955999	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150874638-1	1.49465536445299	0	1.39454811331645	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109370173-1	3.23744729707143	0	1.32019075865801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154587918-1	1.48711030970498	1.23744545820561	1.55949921640525	0.79348899004772	0.427492981428995	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.423054662900563
Merged-chr4-32056444-1	5.86056142812383	1.30586388326479	0.993017716303575	1.31504590686031	0.18849447453032	0.976638117083596	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90450817732946	2.41455337443306
Merged-chr6-124321977-1	1.65382899738074	0	1.48746551404328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24432005-1	1.58366160445643	0	1.40757255079986	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163941662-1	1.40676504376418	-1.54632906916019	1.55574066291341	-0.993950409616735	0.320247010879189	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75236607486236	0.683637474991079
Merged-chr7-116161664-3	8.48511183657239	1.8065662602332	0.553763989935552	3.26233972065147	0.00110496637760753	0.0205128218497561	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47340755736861	3.85066574771813
Merged-chr15-66084044-1	1.96645224503795	0	1.43905705042101	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-66166368-1	2.84886115299467	0.373492327424392	1.20969808780847	0.308748382086826	0.757512937013811	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22763807828004	2.11916498288763
Merged-chr1-34005319-1	1.4640999482132	0	1.42455819480053	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13823919-1	1.9253606942109	0	1.39977854358376	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132384834-1	2.21943429587672	0	1.45759751227418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41156274-1	3.39684946889466	1.17899565157994	0.94008926398602	1.25413159871749	0.209794176756064	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31261594505779	1.90896656829731
Merged-chr6-97518864-1	4.65224639930252	0.523155027710902	0.774884866409959	0.675139043732625	0.499587429827038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5243703093722	1.99834080004871
Merged-chr17-5627959-1	1.08261705060672	0	1.46240641110187	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31142804-1	3.80132949933754	0.0174546371294647	0.835327302424659	0.0208955664190553	0.983328963338218	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6525894268932	1.68807364458303
Merged-chr1-87174455-1	3.00627128530895	0	1.34166688233377	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52422882-1	1.00524259054974	0	1.5518762830519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49380344-1	1.97394003944546	0	1.40374851752432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67129019-1	2.06856324349275	-2.71243774324875	1.30835164268115	-2.07317181005732	0.0381562928897961	0.305409249776656	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76975937178478	0.382164212378408
Merged-chr3-121844812-1	2.8612044404096	0	1.32125677461894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16579230-1	2.82855522536165	-0.129250544989222	0.851387467183967	-0.151811660343942	0.879335485111884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60614577189975	2.08307023099066
Merged-chr8-84921677-2	5.15342117453317	0.249096910572614	0.782904742219974	0.318170138893634	0.750355882419698	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84923632924971	2.00098049458557
Merged-chr1-163900336-1	2.79319307814647	0	1.39278136791625	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124033915-1	2.10098872491987	0	1.44197879085069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76189978-1	1.28388588724748	0	1.45551308346142	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96637932-1	4.09474525505486	0	1.32552947272727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49064919-1	1.75984255739992	0	1.39362533019941	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46607480-1	2.63414681032141	0	1.32436120254982	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75517877-1	2.37822307804601	0	1.34495929615902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-120845224-1	2.66323107136859	0	1.40887395154476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148705873-1	2.05740316184788	0	1.39495510074445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167225971-1	1.4269615598714	0	1.51374003544707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64217640-1	1.57961150458888	0	1.38383488770372	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88618119-1	2.34916563093036	3.08863018392547	1.24241088773932	2.48599735756141	0.0129188924856057	0.134426424898789	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.68348383313306	2.19206322264949
Merged-chr8-70647534-1	1.69140501363226	0	1.51855275847107	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24190554-1	1.79295368680817	-0.51557109945083	1.57335979970019	-0.327687983097746	0.743147590266949	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04778077059259	0.735627456805112
Merged-chr2-29817754-1	2.46910174083207	0	1.37362881732938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55257772-1	1.80314290712684	0	1.46552787509404	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153443229-1	1.95588084027689	0	1.4243034575542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78358334-1	5.65363667845313	-0.956863363516944	0.712333773348406	-1.34327951210161	0.17918148360242	0.941221320537278	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04965453705457	2.20491078807447
Merged-chr18-69084307-1	2.34896956822219	-1.26798192677266	1.1185080771432	-1.1336368084272	0.256946926423613	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82918314923721	0.73596151290311
Merged-chr16-22070769-2	2.88511124950413	0	1.34916200405506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87451259-1	1.95875152570803	0	1.35841897970045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121219185-1	1.8603160073882	0	1.36998412240367	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166957058-1	1.93487309021199	0	1.43336865788556	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28151956-1	2.07761908974611	0	1.35742595195939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90212336-1	1.70084839208591	0	1.41376836084199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155611487-1	1.66408625977194	0	1.52699424132054	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106101207-1	1.83445133445553	0	1.40694632601801	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65571182-1	2.65742621337874	0.943537026165466	1.09569867752145	0.861128196576647	0.389167441112559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.904678204351698	1.50282389800248
Merged-chr14-54701512-3	4.10165715393247	2.66289114632915	1.09269729424089	2.43698887181659	0.0148101351265428	0.148319247506371	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.49176722630688
Merged-chr10-8750645-3	6.00362945838556	-0.533687717553381	0.668901366996892	-0.797857118979189	0.424953410081136	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56404094332928	1.62306943957144
Merged-chr17-31557526-1	2.0358993409143	0	1.42459991624426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85385043-1	2.16392090912424	0	1.41165945761319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75416496-2	2.18199500932889	0	1.4384151813233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77459523-1	2.48135524088385	0	1.444267854927	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-135954390-1	3.20620712711236	0	1.33393397737193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-50394599-1	2.09905110303841	-1.32608355509642	1.408066091017	-0.941776500092147	0.346307079022825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.816279004064202	0.306240821987646
Merged-chr14-37033430-2	2.92561371974221	0	1.33629250771531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-94952441-2	9.56336845939799	1.15179178008858	0.547760948103803	2.10272708208893	0.0354896332791256	0.290214688556845	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.989705923879	4.01197873737529
Merged-chr17-57167226-1	3.00813134080176	0	1.31582105915842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156425657-2	5.09868851715078	-0.60129701269602	0.887340537643333	-0.677639516270711	0.498000284507239	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37772256146592	2.08137696679909
Merged-chr13-56152036-1	2.7074272753972	0	1.3328373408189	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-106307790-2	2.35602874536452	0	1.3878271019254	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55469373-1	2.78015133109933	0	1.34767810082578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99902204-1	2.28283670885222	0	1.37421574193318	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54902020-1	3.00929479618519	0	1.33548318550995	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25517362-1	2.17859854852111	0	1.41054680639495	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-109244731-1	3.3709766375391	0	1.31671067823279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-4544758-1	2.62844816979797	0	1.33667641643421	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-99027613-3	6.42762861799764	-0.245796433182608	0.637686862567461	-0.385450050190747	0.699904006988264	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40245172370154	3.17114368603383
Merged-chr5-64265361-1	3.07856395582801	0	1.34657790341578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51869902-1	2.01783620992419	-1.19551482076215	1.35486952315287	-0.882383727977078	0.377569332173886	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71355907979954	0.581381506691384
Merged-chr19-36818349-1	0.87435928619048	0	1.73723715743465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38284143-1	1.81023167236306	0	1.37856129405004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33670767-1	3.82927923060907	1.69425413913134	1.18001028418226	1.43579607893455	0.151060375902228	0.833293206458467	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.984600738149972	1.94767211644437
Merged-chr13-112757056-1	1.55638194677908	0	1.59264588038088	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64942380-1	1.88890395231268	0	1.41312181878716	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-43384936-1	2.4839079326601	0	1.38309972530663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-57926553-2	2.55561501648828	0	1.32618667922643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99096835-1	2.09021479612793	0	1.41580877859183	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-142319535-1	2.94414926052305	0	1.33960894197015	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131820261-1	1.45404969177632	0	1.54635221739457	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104952719-1	2.65848567460146	-1.45301651084886	1.16481351579695	-1.24742415085622	0.21224201574381	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56132827062822	0.843323834477631
Merged-chr8-35871640-1	2.31712921482831	1.11788196255018	1.98656687586238	0.562720528633044	0.573625203138058	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr4-150155980-1	2.08244767396691	0	1.3919091047362	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-101978279-1	3.91687908155423	-2.40312937758708	1.08288883126431	-2.21918382405085	0.0264742211007778	0.232618589760848	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55715210626624	0.563523181795778
Merged-chr14-26438412-1	1.68883075117773	0	1.44320901570172	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-24994181-1	0.84741999727175	0	1.91519822010871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-161991488-1	2.89598043038434	2.3921532503423	1.21256735209911	1.9728003118352	0.0485183176386393	0.363079453568089	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07880797389428	2.95710352170887
Merged-chr16-93615637-1	3.25077337377634	1.89975560088355	1.29618586925161	1.46565060301146	0.142743497863066	0.799786168562743	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr3-136314552-1	3.87995922047419	-0.915618422736925	0.852612521660366	-1.07389746159705	0.282868641166588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47516605051797	1.47711801254374
Merged-chr18-4255692-1	1.74129709784811	0	1.39420658623873	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-54496250-1	1.98352151510983	0	1.46946459057255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-17742130-1	2.23334900020883	0	1.3670059528476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83256920-1	3.80399887487749	2.10263556383768	0.975591749631406	2.15524123141887	0.0311429619620272	0.264020237723227	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78524826019881	3.17283015146628
Merged-chr16-33166492-1	1.94773883348219	0	1.38686377632661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43377072-1	0.976121281651962	0	1.54140801740428	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-71396616-1	1.99468665867605	1.13696150819185	1.95590294830514	0.581297507208661	0.561039960381968	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20908110591048	2.50201473284981
Merged-chr6-97800118-1	0.792614090545201	0	1.69014543493754	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28803400-1	2.22853504825951	0	1.4319909702159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105260948-1	4.74857655037123	-2.13416108219384	0.863740160214138	-2.47083692584671	0.0134797272173717	0.138666184881819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.4126489786497	1.15307255889252
Merged-chr9-119923500-1	2.33975925934493	0	1.36172886422642	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105926562-1	2.11174576741529	2.66588425574753	1.45929935006648	1.82682480851245	0.067726114533728	0.464286951866676	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.26501898168246
Merged-chr5-92028900-1	1.66568620783563	0.732037581817888	1.25838781061743	0.581726535843283	0.560750894626224	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02670279274654	1.35032549026822
Merged-chr11-86117710-1	2.22756141291018	0	1.4310873937363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134418295-1	3.9274243832742	3.58536466067099	1.35579212102914	2.64447964039609	0.00818166285319269	0.0946431121976862	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	2.82708162815316
Merged-chr7-80773126-1	2.16287214928321	0	1.40378663939608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-93860608-1	3.54804558032528	0.0140470645444595	0.843592456040946	0.0166514819375977	0.986714653592438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.67988526519901	3.21017871366514
Merged-chr10-106999555-1	2.56073739815732	1.27303512763962	1.89862116712908	0.670505074777286	0.502535872497414	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40228134829631	2.11954826727022
Merged-chr11-31803955-1	3.69067752979249	0.745794287218631	0.93548646361737	0.797226166517438	0.425319691824219	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02914420173543	2.06806339973931
Merged-chr6-97828751-1	2.96453861061132	-1.61029752382597	0.954104899056587	-1.68775731622196	0.091457824290654	0.579404602845897	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42043435782276	1.03295826569721
Merged-chr11-3104629-1	2.00852037978424	0	1.42735259891456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-31120611-1	6.22127335769814	-0.43802967086652	0.578842162018978	-0.756734218078881	0.449209110158984	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.38946485349729	3.01206875777999
Merged-chr3-87816749-1	3.16884389808678	0	1.3244082582923	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-145156146-1	2.5579119300628	0	1.34333251477764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42025153-1	3.06257526141754	0.682798232644132	1.67650326023378	0.407275219106295	0.68380586130657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.903978866607358	1.56104072393284
Merged-chr1-191416821-1	3.30926215429343	-1.77538989967838	1.01605231006191	-1.74734103952797	0.0805781982803496	0.527760142811238	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56996235349426	0.733321818366247
Merged-chr14-120741343-1	1.55101059727619	0	1.44529032398255	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82051797-1	2.52876861445419	0.133555900347157	1.34836837526787	0.0990500094758039	0.921098563475196	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45051845003847	2.1359713465465
Merged-chr16-78261681-1	1.78513871405841	0	1.49285835866743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115471336-1	4.14918590522995	-1.49385360342223	1.18076906038977	-1.26515307144744	0.205816461305856	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52106044075614	0.683637474991079
Merged-chr3-116047229-2	2.91630999883262	0	1.46238388692536	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104176637-1	3.61607589109972	2.591988892774	1.18722775143909	2.18322801975622	0.0290190222961884	0.249871792194851	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.736070423127282	2.56668112102066
Merged-chr1-44070902-1	2.3364547210999	0	1.37549475197315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115495499-1	5.62372740838151	1.64405693759892	0.853678176649666	1.92585096183571	0.0541229860321992	0.392402157468112	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7698895292322	3.80236619434955
Merged-chr9-63738786-1	2.7252257646628	0	1.36284699223118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93689570-1	3.87864358632745	1.01858937091965	0.757792448859067	1.34415349803662	0.178898755424827	0.940066801849699	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13901328928609	3.53015689313859
Merged-chr1-33863394-1	2.05353477274379	0	1.36462121025493	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140204043-1	1.25075084543912	0	1.45921678765342	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5532901-1	0.761882131613478	0	1.77569409626872	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66880791-1	2.21643274185663	0	1.3721193304845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45748614-2	7.55645815745014	1.02526050055691	0.570213128948707	1.79803033025068	0.0721722014842855	0.486855030266555	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43653895604182	3.08686462146428
Merged-chr4-3688052-1	4.94633136129726	-1.1775340644819	0.894708170825076	-1.31610965774014	0.188137239919839	0.975066312129498	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72564040276563	1.69181239031707
Merged-chrX-81174547-1	1.61858827180957	0.381936035350604	1.32493419596399	0.28826792795752	0.773141655378374	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5786562558324	2.11539020246932
Merged-chr3-125895860-1	4.69309336224289	3.65955335715893	0.975909320179122	3.74989077518722	0.000176911610572721	0.0049701058058835	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.602901876011713	3.70725431807534
Merged-chr4-136907218-2	5.9606058562045	-0.214424587108627	0.627799377671325	-0.341549537535358	0.732689918800192	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.9577705073468	2.41316001406225
Merged-chr7-132466098-1	1.40958191457075	0	1.52904599187789	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65671663-1	3.53972609079041	1.77376288596998	0.809389791022915	2.19148166389433	0.028416955207006	0.24572374685153	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64501605075258	3.08292340562346
Merged-chr10-117832892-1	1.53849649224137	0	1.41351103043593	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44468086-1	7.0341341399679	0.246083199713148	0.659653973461695	0.373048915966906	0.709112037767286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54556512859015	2.48718831954708
Merged-chr13-49102369-1	1.90310227074203	0	1.40196089244671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99492969-1	2.35789835401056	0	1.39883983055066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75067097-1	1.59230818329132	0	1.41210145187739	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-53005425-1	1.52518686839693	0	1.46255357979213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70202415-1	2.56303362765792	-2.80993512938872	1.51165341842094	-1.85884879109654	0.0630485743683607	0.440089896553496	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64602736256639	0.469435083901436
Merged-chr17-48602710-1	3.00401292263397	-1.78554368450558	1.13344728882663	-1.57532132469435	0.115182294170447	0.688627831185912	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3187172418125	0.73596151290311
Merged-chr6-136655335-2	10.5864834375703	1.40546221934501	0.514355821066247	2.7324707173169	0.00628612590851124	0.0777050407963941	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87123014734843	4.23529528336796
Merged-chr2-146983090-1	2.38402256199659	-4.22714935150652	1.28446715726347	-3.29097503786112	0.000998407723273138	0.0189988209333158	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79420173239129	0
Merged-chr4-74310188-1	1.70783039505608	0	1.47918652182875	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-148731603-1	1.5006997122032	0	1.42531035946385	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-51195974-1	3.29414688351853	0	1.32325748421862	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136853729-1	1.36316753069723	0	1.79795502821958	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124901967-1	1.7810114825034	0	1.39602715997564	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-96654801-1	3.7238882972335	2.87210368638608	1.00348066127619	2.86214154115679	0.00420788944014711	0.0570119724975851	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03916794530514	2.9896207871548
Merged-chr4-116644534-1	1.60228332769958	0	1.38575023408004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54009430-1	2.24196683492465	-2.1302624210372	1.25751778192051	-1.69402170821299	0.090261158058122	0.574034611626865	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31454146917439	0
Merged-chr2-103670522-1	3.07190271067052	-2.97302490127639	1.0974587026374	-2.70900845210089	0.00674846205603265	0.0819065753182596	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06494183887521	0.61242769162773
Merged-chr11-109875992-1	2.2265500540365	0	1.33560057257054	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165154401-1	2.31054852752355	0	1.34479529763194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-101159545-1	2.31825451185993	0	1.3877945182859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94625049-2	3.70424306102931	0	1.38711193324892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134394818-1	2.00288577221235	0	1.35443550521339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-88383881-2	2.03837391108993	0	1.42876820418518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118892102-2	2.49271420635444	0	1.35918885954702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43383215-2	2.38282195924286	0	1.41399236150477	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35842549-2	3.33253671054592	-2.01624378738568	1.16542461658227	-1.73005079753552	0.083621199871741	0.542094337978054	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03046024615963	0.581381506691384
Merged-chr2-143838025-1	2.40255474463467	0	1.36937110490806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-78846681-2	5.22111049151688	-1.46866461335311	0.903330584739112	-1.62583293222301	0.103985200593517	0.639832101505081	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76746372098068	1.41959898789419
Merged-chr2-83903344-1	2.11742939076539	-0.0347077614604545	1.49110262054724	-0.0232765746516605	0.981429657370825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	0.469435083901436
Merged-chr8-123835707-2	6.33857670731812	0.55329701013246	0.620557579276815	0.891612686089921	0.372600568046862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73381047999865	3.72414390112353
Merged-chr15-53399305-2	3.12777509027509	0	1.32933845628999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-108204133-2	4.9735380909718	-0.360662111910031	0.931641830160267	-0.387125288103463	0.698663457200188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38540488347012	1.11548603074465
Merged-chr5-105743280-1	4.99513644383293	0.0567602548625693	0.843152768500721	0.0673190636182093	0.946327700741146	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84164956112345	2.43569701981196
Merged-chr7-129772008-1	1.54665276343245	0	1.45020922374283	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39587056-1	2.0514288952176	0	1.37029175909221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70613577-1	3.1469004450432	0	1.32564095568744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-105846959-1	1.25602766781972	0	1.55311030269346	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70003950-1	6.28627120798816	3.1044547676812	0.810803041564499	3.82886423525367	0.000128735996087013	0.00386900244491991	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.9904149686335	3.78894736311116
Merged-chr12-100764919-1	2.16054574670607	0	1.34759970515368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-15097035-1	2.00990571662653	2.84776132602958	1.3007340719279	2.18934937393371	0.0285714562850869	0.246798464296799	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr4-148709658-1	2.93292579502337	2.20514217214891	1.03910181315593	2.12216179803547	0.0338241533475616	0.280419277076887	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.682086928949483	1.88903407179563
Merged-chr10-19204145-1	1.46632486770657	0	1.53100472508826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-124866191-1	1.76623438799945	3.26729029452374	1.60385434131537	2.03714901681416	0.0416351111264568	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.887107926668329
Merged-chr1-60447301-1	2.05704996470295	2.29006188450824	1.3582953087737	1.68598232631442	0.0917992035335882	0.580988935022359	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.581381506691384
Merged-chr9-120496861-2	2.60304644465612	0	1.3400080698086	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-180605338-1	1.4307394378604	0	1.47552773610631	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-37306910-1	2.58738217758206	2.68633852127417	1.20404656062788	2.23109189388267	0.0256750425941721	0.227185014672819	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	1.95348508901398
Merged-chrY-90737651-1	1.79026569904097	0	2.11973264272247	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-116193063-1	3.22215231409578	-1.40237784148617	1.07274914252152	-1.30727472612083	0.191119424622371	0.985808351376742	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89987788589683	0.963545719069792
Merged-chr11-100720482-2	2.96417068677212	0	1.42369267745585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100694880-1	3.24679515047364	-0.0506257832966612	1.16330010196261	-0.0435191084495308	0.965287732615157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85223657604716	1.69453213775868
Merged-chr3-87935909-1	1.85009717212075	0	1.38879904877004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64975746-1	4.63867571597823	0.718127482928874	0.934542077485767	0.768427126214455	0.442233469750061	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06778998204814	2.60391341779232
Merged-chr8-115689292-1	1.88731312870119	0	1.461492278065	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-82998959-1	2.60530228036872	0	1.34190254584486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26481140-1	2.63545129155053	4.19768194416438	1.13473625488333	3.69925780206607	0.000216230875544178	0.00580996003014386	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.19143458403277
Merged-chr9-115316613-1	2.49466533397387	1.85662362903168	1.9299604639484	0.962000861527137	0.336049171171389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.733321818366247
Merged-chr19-34752911-1	1.13595234366037	0	1.46581502178018	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19956118-1	1.93495363644742	2.63509793924052	1.3350710073202	1.97375115240483	0.0484100456361591	0.362552815146089	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.666688015277142
Merged-chr18-20704302-1	1.38247172001186	0	1.55624348484023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64986290-1	2.59905228104497	0	1.33984756531113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63883460-2	1.55649730181043	0	1.5195479210813	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49178574-1	2.31354147169507	0	1.52425579115268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160383049-1	1.36247795779757	0	1.49763451975295	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164677183-1	5.6626205121237	0.742849978772582	0.728831701960692	1.0192339010147	0.308091935800588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18384211260864	3.03785946669997
Merged-chr3-30875210-1	1.78694428465745	0	1.48037942031349	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111447213-1	2.57891420710916	0	1.34510754784241	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-30573156-1	1.72442022539554	-0.763121241621507	1.19274689987886	-0.63980148822773	0.522301664955716	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75348655852486	1.03956264035389
Merged-chr13-58453766-1	2.29750573376921	0	1.3702304940394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61849380-1	1.30423620468744	0	1.76763621294389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120094275-2	2.47137546181745	0	1.34441787999784	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137950019-1	1.79405674341279	0	1.43043532281864	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-26583462-1	3.27437074488752	-0.314123171355464	1.096178057779	-0.28656217767387	0.774447578146423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13312730222004	1.30806904914164
Merged-chr5-121946046-1	3.17377039313073	2.4975465153783	1.05485072736836	2.36767767284872	0.0179001230267417	0.171913791785048	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	1.93847405924208
Merged-chr6-95112239-1	3.98362042443552	2.50184925823492	1.11050887572425	2.25288542300327	0.0242663742062742	0.217697760692366	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	1.40264952818025
Merged-chr5-140610806-1	4.14495233105302	0	1.3435320105915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39543966-2	2.40811751146244	0	1.40865130471665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-142081116-1	2.23208084208557	0	1.39949543199468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40545697-1	3.66698294419144	0	1.34374898979374	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94265272-1	1.39386916574615	0	1.52723081766222	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-43293761-1	0.875373976079971	0	1.62427994157752	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86578049-1	2.88080957264446	0	1.3406290438137	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44205938-1	1.34057706588297	-3.14648375770428	1.41505100391947	-2.22358328356294	0.0261764942827387	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19829992414985	0.306240821987646
Merged-chr4-105245113-1	4.40648707783808	-1.95868409975116	1.34634866298971	-1.45481193214965	0.145721333935337	0.811790817334912	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10302531769481	0
Merged-chr1-159378181-1	2.05638437861468	1.9145584562922	2.37545100068294	0.805976825344647	0.420256211692999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.735627456805112
Merged-chr14-54496721-1	3.04354167750336	5.00159284095732	1.52129140056493	3.28772833337517	0.00100999249508756	0.019163463874562	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.63019750495213
Merged-chr11-103375969-1	5.09001512094405	1.91445516779029	0.768281283554832	2.49186750838459	0.012707342907191	0.132902373497648	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48737751116552	3.44128132607807
Merged-chr10-8012002-1	1.42023081920433	0	1.49378409406228	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-142334422-2	3.74321275433278	2.89248760112564	1.16555664860266	2.48163622471144	0.0130780711025231	0.135607685538794	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15692263537643
Merged-chr7-45450073-1	1.19218166533608	0	1.61789615634013	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73053266-1	1.69970480625693	0	1.48525088850429	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61082304-1	1.14260889767894	0	2.29159492548666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-23534035-1	2.52951869991908	-0.0761002908432281	0.72753778529988	-0.104599778019585	0.916693390855214	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17391818292967	2.1359713465465
Merged-chr2-165276205-1	4.24807060193868	-0.276819404195646	0.937657602944551	-0.295224401024791	0.76782246294774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68869175085955	2.31260716574699
Merged-chr17-5566900-1	1.75187162571803	0	1.42708763725177	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88304230-1	2.79799418331906	0.266936237746671	1.20543930174801	0.221443118172425	0.824747422206186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57021306343462	1.0995156753045
Merged-chr8-26981072-1	1.40744328928539	0	1.50273901321023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-29835141-1	2.06090702587788	3.39580646870008	1.93591848916691	1.7541061194996	0.0794123253041359	0.522270310922309	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.80505237968249
Merged-chr13-98959982-1	3.50908367069266	0.756171364929368	1.36061634256029	0.555756491581212	0.578377332219887	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.382164212378408
Merged-chr12-33100744-1	1.68359214750237	-1.5303904234589	1.24433576815735	-1.22988542371095	0.218740013353527	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99263700751372	0.73596151290311
Merged-chr2-45232489-1	2.09059090962766	0	1.35577598130592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74524649-2	4.12014792831985	-1.72588443529484	0.960210009828632	-1.7974030864382	0.0722716511180692	0.487374955001171	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77203735862132	1.17595087342351
Merged-chr16-87630278-1	4.17086044493016	2.05815195963673	1.01224621268566	2.03325231929107	0.0420270376726484	0.327291002712059	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09677657580095	2.89990973632461
Merged-chr14-91591724-1	3.1660352674036	-1.61562579721307	1.2013419154014	-1.34485093419324	0.178673377978276	0.939192941370043	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16308661561553	0.666688015277142
Merged-chr6-24708290-1	1.0326187055683	0	1.71909140749431	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23838697-1	1.32507224299826	0	1.6924965941156	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41999822-1	5.8544771034344	1.05038774151122	0.744074097399581	1.41167088759327	0.158046889173777	0.860357549146086	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83880224182291	2.31874020703694
Merged-chr4-40014813-1	1.381733094781	0	1.81524288278808	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-82761594-1	1.5786338288349	0	1.36297910841663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-89013025-1	0.71858886217091	0	1.93060478751327	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-46715571-1	2.60024119056101	3.21128440499069	1.43548117969474	2.23707872343793	0.0252811952881622	0.224446377048568	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	2.47305154250924
Merged-chr1-75559655-1	2.52506698147875	0	1.35733841115489	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87739129-1	3.49037346618497	-0.666949235876259	1.10087222782619	-0.60583709809197	0.544622932319582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14978114721325	1.7953101035406
Merged-chr1-120028288-1	3.00774911810433	1.09201345895746	0.688574592860813	1.58590437445634	0.112761003357755	0.678497285949895	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91128348761312	2.9616503896733
Merged-chr10-121263312-1	3.68308293732232	2.44561585079483	0.883553407787877	2.76793211280554	0.00564132053158451	0.0713722616567127	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.756987780647496	2.59790867484798
Merged-chr11-64828358-1	3.13024195675588	2.44273930562885	1.62681660727797	1.50154559198661	0.133214503720477	0.763253706616659	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12000521415173	3.94795998544764
Merged-chr7-30205564-2	5.88667138525013	0.0676819703335449	0.700089740365509	0.0966761351169194	0.922983592456205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26894507132624	2.37705875126183
Merged-chr12-16890525-1	6.00564972724941	-1.14285200747213	0.879822347578395	-1.29895769369542	0.193958448371451	0.995945997743269	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46867008767076	1.62319166842064
Merged-chr11-115202497-3	2.9678349932425	0	1.38091625721247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110342191-1	2.88208576855532	0	1.34250046970775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-57928011-1	2.45339471100333	0	1.36548891534281	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55629532-2	2.0510188861615	0	1.36537292637095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46936970-1	1.86253835032612	0	1.39483805270639	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-86317798-1	2.27108451093058	-0.0234092050415152	1.1040275585887	-0.0212034607826634	0.983083353598765	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8609117836454	1.62745902464378
Merged-chr17-90271195-2	3.95881329171923	1.83364215032486	0.97718674950896	1.87645007594124	0.0605935039041479	0.426858894579609	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50583551482999	2.74819222721298
Merged-chr12-115614407-1	0.789131715418662	0	1.71384715009047	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57809240-1	5.75447251957383	3.97586059724215	1.07805655517035	3.68798888905593	0.000226033517971431	0.00599027203585573	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	4.47807185732307
Merged-chr11-95521738-2	2.33828306449203	0	1.35221483228729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63956070-1	2.28661578873545	0	1.36259004069904	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-123523850-2	2.35430890003731	0	1.34400652409873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80182473-2	2.58612759909192	0	1.41556827324243	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73914830-1	1.86606579543719	0	1.35780231282495	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58502732-1	2.97246644588695	0	1.32458235869713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12488202-1	4.41136443061081	1.85611402321984	1.04139820233734	1.78232881433244	0.0746956264884505	0.499798656458796	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.70453804110539	1.42488422888851
Merged-chr11-78278073-1	1.56837049028979	0	1.37504828769103	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40993584-1	2.33155341102131	-1.72593318253095	1.08154108693321	-1.59580916840151	0.110531405696815	0.668838340278179	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.37580336087748	0.666688015277142
Merged-chr13-4110704-1	2.37219194577794	0	1.33106461133013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65483478-1	1.27334974909572	0	1.45963748519237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-117366682-1	1.82953587665312	0	1.57121205630919	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22789779-1	2.36496847295619	0	1.38068089545043	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121985637-1	2.38521665882938	0	1.36646090222837	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115554391-1	3.81798612372453	3.35965790474913	1.08475918239996	3.09714631529194	0.00195393405838345	0.0318805930035268	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	3.27913378949743
Merged-chr2-128724267-4	4.84242053832361	-0.309645471353494	0.813861175138705	-0.380464728890307	0.703600473761816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21920425349379	2.04828035860944
Merged-chr11-87974795-1	3.29573720990377	1.99107665864054	1.03386467853802	1.92585809339778	0.0541220953066186	0.392402157468112	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	1.21653520045322
Merged-chr12-25089545-1	3.90922956999143	-2.93842223811339	1.13392353093951	-2.59137601252419	0.00955929809062449	0.107201285915557	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81687583592425	0
Merged-chr14-13001289-1	1.41255902926512	0	1.4652333455539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27968519-1	2.16879857398579	0	1.36385892971417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59683620-1	2.53947605907499	0	1.34243455420598	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16695223-1	3.82591825184356	1.81649852171834	0.958975845141145	1.89420675288331	0.0581975721381321	0.414835183829064	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70867290641134	2.73302203785805
Merged-chr3-96229017-1	2.34402099706087	0	1.38953293339899	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41316831-1	1.60637125679678	0	1.46018353012497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-132982932-1	1.88049232452845	0	1.47275093328512	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67056747-1	1.6192787365077	0	1.52230958771227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-114898960-1	1.92028605208005	0	1.34822291219892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98194292-1	2.30919599894907	0	1.39090577818919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-96546877-1	3.46247503005091	1.99712507561174	2.05089242517197	0.973783437443958	0.330164078437231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.09662457429765
Merged-chr16-36642210-1	2.2228147968426	0	1.40048535670938	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-13344983-2	2.0758773756161	0	1.51229342699104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-97713789-1	1.37140521439846	0	1.42113868692744	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131592273-1	2.23257456760416	3.82227430481213	1.30869285751862	2.9206809549335	0.00349267299349073	0.0496008463399585	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.05199165378257
Merged-chr1-132346340-1	2.05334630035462	0	1.37557879805124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97845776-1	5.09857193231657	0.675033246259713	0.713867787691582	0.945599812596325	0.344352739870029	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95622980945131	2.33702325444368
Merged-chr11-73129534-1	3.06893196181222	0.597684549332871	1.02824162746407	0.5812685786773	0.561059454095133	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.75261347666835	0.773587911294612
Merged-chr16-76563032-1	1.96395096405727	0	1.41365365219684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28012037-1	2.65882526158474	0	1.33420556420496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56489353-1	1.15645899129349	0	1.638545224558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16329864-1	1.68448839115581	0	1.45968324187826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-108077670-1	1.34201524054589	0	1.42960436314688	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105911077-1	1.81855797687247	0	1.46877862754286	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-62172114-1	1.27235606959174	0	1.61655258540159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-150208368-1	1.18381352637571	0	1.79690050756792	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21424051-1	1.21625390368191	0	1.89261223427265	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25503834-1	2.92192857134263	0	1.36951881737269	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91586019-1	1.86840264499962	0	1.41510543901417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36708041-1	2.37379317664984	0	1.35009812735951	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5511982-1	3.45449978374531	-1.8463276518589	1.0741195721358	-1.71892189636544	0.0856285945202407	0.551659877503663	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24881742618075	0.683637474991079
Merged-chr12-54825401-1	2.24585974365016	0	1.40887011412742	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172405860-1	1.74405584745963	0.0827860544540373	1.60113562719135	0.0517045858252853	0.958764083169295	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr4-142135802-1	2.37310312119105	-2.35400289671402	1.31457214497734	-1.79069890207859	0.0733416260071098	0.493013259238823	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883819140476528	0
Merged-chr7-125466469-1	4.11950228580964	1.62724250330467	1.10723337002989	1.46964727342054	0.141657309851805	0.796552669269085	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71589524459276	3.11380129041314
Merged-chr13-45477453-2	2.8971239253332	0	1.34158349204275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67494960-1	1.82972003389031	0	1.37482118878626	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146185111-1	2.0869915566028	0	1.36239027473063	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63146116-1	2.10864742288582	0	1.37649932188454	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-72225058-1	2.14608519946109	0	1.37726292179091	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55419766-1	2.92544832811933	-0.0950115892962362	1.15492042554909	-0.082266784095592	0.934434567312702	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.926118884040621	0.666688015277142
Merged-chr3-116436343-1	2.25316524789182	0	1.33873310699332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-14386627-1	2.48035539602026	3.25221479405985	1.33921694204702	2.42844508006953	0.0151637215199972	0.150889073617441	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	2.17761187261032
Merged-chr18-38233166-1	3.00077099532403	4.02651940717527	1.22198819970869	3.29505588362895	0.000984021088892796	0.0188017082090025	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.28937764326066
Merged-chr18-34380175-1	2.03818640541716	0	1.39176726000901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-8135341-1	1.42145799177525	0	1.50097104984299	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92821820-1	1.43304450045274	0	1.51699015449499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34386184-1	2.65783358353949	0	1.41337805908593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75344787-1	1.7015010180148	0	1.62631535270834	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136357543-1	3.71248798149811	1.97798723320066	0.912849907731204	2.16682634948909	0.0302480974908887	0.25824303353013	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55588857229515	2.8802875788743
Merged-chr4-40157930-1	2.19559241841632	0	1.4970050129967	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29190579-1	2.73096400105052	-1.23214360453513	1.3088439494023	-0.941398403604802	0.346500731384701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.79472956089802	0
Merged-chr17-29499385-1	1.93331457578053	0	1.66997783104183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38989098-1	4.66142842472945	0.596462853504267	1.16653724784816	0.511310594329091	0.609133587747741	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50712755001212	2.91772676303785
Merged-chr2-131821121-1	1.33027539257898	0	1.43320113664609	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112907569-1	1.87218425718587	0	1.41279919161261	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25331451-1	1.62363960725405	0	1.38350594957824	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38110535-1	3.42682940271657	0.189642785763511	1.38258564931375	0.137165307521917	0.890900132263308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18548116023368	1.41926493179619
Merged-chr15-78624924-1	1.73280790407295	0.743589368593741	1.51436930191689	0.491022478897653	0.623410548815324	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.469435083901436
Merged-chr14-45668719-1	2.89932835414704	-0.672515945198701	0.909820238929612	-0.739174527475784	0.459801026320487	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54488349976426	1.22548804685604
Merged-chr13-95557875-1	2.86606327497092	0.175036627266748	1.15991809864926	0.15090429873504	0.880051209422865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.935892628934282	1.33924509967612
Merged-chr10-84162825-1	1.44386657331677	0	1.45753010254493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-83759393-1	2.17088241345086	-0.200832468338176	0.962671112750033	-0.208620021602668	0.834744879492041	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91344211081725	1.40264952818025
Merged-chr12-52503293-1	7.3420747074598	0.0997369544833424	0.571197242593299	0.17461035706427	0.861385809856028	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.78454602109709	2.26492720551813
Merged-chr1-128006360-1	1.93949188098657	0	1.38697317305622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31128122-2	2.29953851918779	0	1.37699786389136	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17838671-1	11.3863694934295	-0.558630314293778	0.581297895397798	-0.96100522420005	0.336549541086628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75608364457925	1.98790621793328
Merged-chr16-55813310-1	1.55437198419663	0	1.64086739542647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112272138-1	5.93579473569811	-0.546510316115306	0.631285893144903	-0.86570969199507	0.386649383681679	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.00386046370298	1.60978507060531
Merged-chr5-77194114-1	2.51701307147977	0	1.33225308949099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40647610-1	3.72754941988046	3.30165602005766	1.09337576166021	3.01969015212514	0.00253033400820382	0.0388750659118165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	2.22281280114811
Merged-chr17-34785229-1	1.92701665907243	-3.51106579127328	1.30327800095031	-2.69402674541666	0.00705944997350503	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.98387900329745	0.306240821987646
Merged-chr4-63719465-1	2.34963389464328	0	1.54182644960247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54796722-1	1.94931896831526	0	1.37019073333802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56569316-1	2.9418837598089	0	1.40898048914898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72244529-1	1.37586626673986	0	1.61182115133209	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-125214770-1	1.66908129771231	0	1.42678670835164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79683002-1	1.86940427739456	-1.62758372957752	1.56592739777067	-1.03937368481746	0.298630977713609	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	0
Merged-chr3-95951635-1	5.78394203293647	2.299379078649	0.738403973076666	3.1139852472195	0.00184578718678987	0.0305068013466173	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60563212430678	3.83740851127071
Merged-chr13-49191357-1	5.51418885505523	0	1.30579042866468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-135745165-1	1.33595679399863	0	1.51826278452445	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56567124-1	2.88625504422456	-0.403383522662769	1.07531954979023	-0.375128977001728	0.707564547464299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19290813249946	1.20275690226768
Merged-chr16-65471296-1	5.05099111839224	-0.573486768146455	0.710181259424532	-0.807521686239873	0.419365985498463	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30330983228785	2.35204052049844
Merged-chr9-96381584-2	3.16214017371973	-1.91888491283504	1.03921648241897	-1.84647274682218	0.0648235929627053	0.448772381157002	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63806902131713	0.666688015277142
Merged-chr4-133422937-2	4.21516604867143	0.338780893986479	0.946566620722215	0.35790496576775	0.72041443441834	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30531355901645	2.32724178272127
Merged-chr1-166844735-1	2.00349287256366	0	1.39178097544714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18608370-1	2.15469027263846	0	1.40490822931585	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87893167-2	2.92495252657892	0	1.3308200674519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100640229-2	2.39178825888899	0	1.35186591737073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121536017-1	1.95001983639994	0	1.40699194007759	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117018659-2	2.28482790652319	0	1.39444584980511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58507585-1	8.73829597862111	0.0680748438371195	0.676511092883314	0.100626352698789	0.919847076452474	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45463978548112	2.38049358889031
Merged-chr6-108672242-1	2.25933219736646	-4.00259497707665	1.24385254128564	-3.21790151502974	0.00129132148642036	0.0231884291980283	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85229755500984	0
Merged-chr13-117958438-1	4.57367703698138	1.93729403568942	0.94914944827465	2.04108429838	0.0412424487985659	0.323076566486049	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5466274228736	3.13134338926628
Merged-chr5-28419905-1	1.39727121961971	-0.109349137398429	1.27104855940333	-0.0860306528727437	0.931442050082124	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04463589554984	1.33962963608869
Merged-chr1-88584823-1	2.07312417389675	0	1.43966159162705	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140706368-1	3.18614923841476	2.95730818964321	1.16761267375674	2.53278185147496	0.011316135346995	0.121862917004735	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	3.25781653246323
Merged-chr13-94721782-1	1.94597837428978	0	1.43517082676481	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60186208-1	1.51056702002046	0	1.47299860476049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90639985-1	6.11770785552304	0.858322405433585	0.824154461772923	1.04145817955916	0.297662952841714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13197769846738	2.82856958860614
Merged-chr13-58479348-1	1.15524359808798	0	1.52765849490364	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99130653-1	2.95677249932342	0	1.33164555395514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60408084-1	2.03829185846137	0	1.39862058153921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103480412-1	2.35918407810261	0	1.37970248732368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62952885-1	1.97813884593944	0	1.39043510358654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72900960-1	3.06578316045029	1.41634748575646	0.971026203407065	1.45860892402994	0.144672775996624	0.806989680439047	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29426787717726	2.6847444908354
Merged-chr7-127129196-1	2.02943543702939	0	1.35086582855208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144997355-2	2.27736321802441	0	1.42860826203385	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59584233-1	4.60535586038403	-1.09056967869484	0.756257297292287	-1.44206169328816	0.149284970356015	0.826639748570814	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2735689001512	2.40184156770979
Merged-chr18-11676777-1	2.2825166195069	0	1.37327796728238	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78627451-1	1.59550535281887	0	1.50959005360998	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31076289-1	2.43050470299401	4.63147632174709	2.08127596255446	2.22530620882327	0.0260606889310259	0.229664434104763	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.97381856258121
Merged-chr6-133973421-1	1.30253633797732	0	1.47898242646418	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30771780-1	1.59934675163438	0	1.45611247955438	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64193856-1	2.85930461428728	0	1.38777383531534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-106983206-1	2.52221799247786	1.67775051218538	1.13513767915017	1.47801499589145	0.139403764469312	0.78713197900386	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78745813917017	3.14095140344808
Merged-chr7-80530924-1	3.29540683502368	-1.65316153289273	1.03992503029918	-1.58969299201995	0.111904024112478	0.675018956859043	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77754885480587	0.563523181795778
Merged-chr6-31073241-1	2.96455510040649	0	1.34728450298713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64527770-1	1.39420266119962	0	1.40234589057017	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123341461-1	1.6442472316045	0	1.44514705977903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97641911-1	5.57987679951052	-0.24081049109254	0.600026722840111	-0.401332943894082	0.688175011881701	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45544776412096	2.73430231295182
Merged-chr19-37508499-1	1.16652347084151	0	1.75897359362215	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64386144-1	4.60523227465956	1.15422023896755	0.772281098458834	1.49455974161599	0.135029379471592	0.769883067005553	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64197534362396	2.82422868307434
Merged-chr11-120262816-1	2.36922605695191	0	1.34251992780698	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45737051-1	1.61857461985993	0	1.37515530859745	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60431373-1	3.72430922516268	-4.21903469353948	1.32822979449534	-3.17643431206306	0.00149097551088371	0.0258707609490724	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30072191700366	0
Merged-chr8-70866346-1	8.34443373819432	2.03896155461524	0.685526858679141	2.97429856875902	0.00293659187986062	0.0437715631800575	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21039326286284	4.25539583189502
Merged-chr18-20649702-1	1.52458878037253	0	1.5188307944589	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191177027-1	2.153687286334	0	1.45612129710357	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110357683-2	3.28373791605698	0	1.31765695620191	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20804482-1	2.02582234425265	1.92549495074492	1.25967163552366	1.52856895118105	0.126371338062057	0.736060384793936	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.683637474991079
Merged-chr4-117191430-1	1.69589017827325	0	1.49454033095155	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117909891-1	3.47267319408519	-0.57446808923119	1.03042087664333	-0.557508201020307	0.577180257427122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16767625817423	1.92713101668536
Merged-chr16-94606480-1	1.8701628488151	0	1.44092401603703	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-73263634-1	1.03150184761395	0	1.76549107551353	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-111418776-1	3.26719675658215	1.22850906988396	1.13989552312064	1.07773830580606	0.281150558615356	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.973873180804663	1.32852444445417
Merged-chr7-19443646-1	1.90725198577137	0	1.38396850832741	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-58341008-1	2.68656440837032	1.6098546840595	1.38764067677683	1.16013800330416	0.24599262355151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1865719695653	2.93765107611301
Merged-chr13-59666611-1	2.34020746190145	0	1.37614625075323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95141529-1	2.51973806255809	0	1.35939449143684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11002831-1	1.5745985817024	0	1.57779454287525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-79797764-1	1.2058465477101	0	1.52979055013165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-52294271-1	2.20233176175796	0	1.35250983644425	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-40956292-1	2.2526402046619	0	1.36617455221846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30931997-1	2.35978377219313	0	1.37766811666986	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72026713-1	2.0122797537934	1.54120010177559	2.05046282374912	0.751635232750826	0.452270449290308	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr13-93253104-1	3.40524218613619	-1.14925459174678	1.03859264498317	-1.10654990414014	0.268488576531794	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58994667845138	1.40343015234056
Merged-chr7-98688837-1	2.17514845513144	0	1.3684119711681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-112149039-1	3.20839081144641	0.555236173449684	1.30000307038646	0.427103740058571	0.669303768956402	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61684143735826	1.96927967908792
Merged-chr19-56599505-1	0.992628495620084	0	1.60450735474008	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84376130-1	1.59649462487896	0	1.52932177964703	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55650482-1	4.95750921713686	-0.867987472288795	0.703160865028013	-1.23440810696172	0.217050869642627	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14731000421783	1.63657599924846
Merged-chr5-44066968-1	1.40858109427496	0	1.92288869598174	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-60013311-1	2.03891918754236	0	1.43256266017802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129504057-1	1.75331445605635	2.51278455524887	1.40695880271691	1.78596882182801	0.0741043064624834	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr15-93358906-1	2.00209519650512	0	1.42414756142889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103989090-1	1.79606137230255	0	1.36868796236206	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120322822-1	1.8656631026978	0	1.45177925773245	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-53158324-2	2.53272629093172	0	1.33357703989766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-151579978-1	2.61072633994569	0	1.36033248672697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64611471-1	1.59647953571206	-3.22430561808966	1.57096022696485	-2.05244255248851	0.0401266726672464	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75774106785194	0
Merged-chr5-23758922-1	3.82537797988374	-0.530238031155715	0.756023526672251	-0.701351231078265	0.483083849223624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79127435796147	1.53823966306787
Merged-chr12-33126441-1	2.26229225954177	0	1.38216039853806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70263892-1	1.34120002098647	0	1.38521820131926	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-103923297-1	1.04814243173442	0	1.55192990146498	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50853283-1	3.80672877790885	0.16839228345318	0.875597479600612	0.192317003390632	0.84749390021669	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73348252654836	1.37562316341215
Merged-chr14-21757008-1	0.841900002227533	0	1.92293190967498	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41761872-1	3.93216658175724	1.30234073424665	0.810218462962843	1.60739454083062	0.107967846882788	0.657353184157876	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64687827449062	3.26211881241837
Merged-chr11-70247674-1	3.14850176493378	0	1.43562086529634	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-48937657-1	1.97169220702911	0	1.42715176590194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-28862605-1	1.52314479366563	0	1.59131266549181	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121754961-1	1.23578957600869	0	1.70371311020501	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3428303-1	0.73456359500846	0	1.98106555064344	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104456860-1	2.73045638602765	-2.11934784650554	1.12098576238515	-1.89061085128874	0.0586763106436765	0.417266535566622	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.32195858473319	1.04885222765555
Merged-chr7-24390325-1	1.17035949325742	0	1.57093505084598	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84719304-1	2.26313793962667	0	1.39637662681263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56723000-1	2.68197426302746	0	1.35224119284864	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21804514-1	3.49183579639643	0	1.34922898170873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93973767-2	2.81273575652664	0	1.35360988180993	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120128260-2	2.58171155653187	0	1.3833926407602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-71831932-2	2.3670942187209	0	1.32881549199952	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117095645-2	1.33243441331986	0	1.91694036776129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134803468-1	5.00964639841712	2.31194595678713	0.875253824681235	2.64145770243178	0.00825501141083418	0.0953902697882176	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78796484803885	4.37885915011237
Merged-chr15-88539497-2	2.2448651421799	0	1.39025616551728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110639695-2	2.67690793061916	0	1.3289919596027	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-64397541-1	1.59351621934417	0	1.36483992839085	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46873860-2	7.59536111088099	3.11759483354267	0.835086705530868	3.73325884952367	0.000189018162549773	0.00522707611086646	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.614283512421258	3.26392576877833
Merged-chr5-93117799-1	2.76184594538626	1.44099410326864	1.26997598467851	1.13466248232514	0.256516762614401	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0.73596151290311
Merged-chr2-73458024-1	3.11553067016093	0	1.38237700719758	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-46564981-1	1.70733656821906	0	1.41078624063997	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122703008-2	3.7504096769487	0	1.35225180123833	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-40897061-3	7.49140104839989	0.524985086027672	0.568187403311625	0.923964668994503	0.355504711147804	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09360406322282	3.66282395120017
Merged-chr7-110205059-3	3.67544066401743	0	1.32605070364563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34208223-1	4.7565340511571	-0.481413021825283	0.848604674582541	-0.567299516776887	0.570510705291877	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82996786727463	0.735627456805112
Merged-chr11-8565558-1	6.19228354940759	1.21393930513258	0.867881044528215	1.39873927744612	0.161891181321275	0.875088190472334	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14259338046966	3.52995590494597
Merged-chr8-105477203-2	3.70426651782972	0	1.3217503247226	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116785011-2	5.92145515151263	2.03141206603815	0.574633231015087	3.53514547435704	0.000407550721652813	0.00942718918836273	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0975379373658	4.25849804578855
Merged-chr6-122834548-2	3.04823569995567	0	1.3525669850185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58211662-1	2.28508372526507	-1.31716902331677	1.06515087922893	-1.23660323528088	0.216234418229042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.89170550796098	1.1517642783294
Merged-chr13-4666970-2	4.40399296370406	-1.17285270302539	0.994067005544978	-1.17985276292557	0.238058780045409	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78323207390742	0.73596151290311
Merged-chr17-17447986-1	1.88226701283075	0	1.41301386793712	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-86848999-1	2.77628539627887	-1.34682800152989	1.00532696777384	-1.33969150803968	0.180345659515161	0.945609117731688	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.24338849416516	1.9001726754443
Merged-chr1-174999874-1	1.37398083906326	3.11426699557009	1.59077446041436	1.9577049249074	0.0502646470242236	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	2.05799583614532
Merged-chr7-109713679-1	1.62511284896958	0	1.54601041368159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-113639290-1	1.55919036631185	0	1.52469752849275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129736641-1	1.58193751572961	-3.78670148447474	1.40286008227793	-2.69927238811015	0.0069491273026616	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55702485911412	0
Merged-chr5-136783021-1	1.53411043505527	4.4599070391447	1.67236494819496	2.66682642682653	0.00765712066162235	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.51693545116549
Merged-chr14-33851613-1	1.61734561996053	0	1.45947724151349	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-109641844-1	0.847014110754858	0	1.6494531547172	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83259376-1	2.74839440909931	-1.40987903857545	1.04205209220727	-1.35298326169956	0.176060977803514	0.929537097483108	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66917933923862	1.31734301959449
Merged-chr10-88679312-1	3.01061427990583	-0.556687821947019	1.25563447807577	-0.443351812702793	0.657511284505586	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	0.306240821987646
Merged-chr1-97571259-1	1.25484882825999	0	1.55786405077761	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54948356-1	3.6225807974469	0	1.32830023281805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-83813538-1	1.56843775698561	0	1.49433046574785	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122743649-1	1.38036446258321	0	1.50530652220411	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-39665670-1	3.3366107760896	6.22425667386684	1.17758933168462	5.28559193463704	1.2529892544815e-07	1.50510727616449e-05	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	4.34560247748483
Merged-chr16-87738192-1	2.87045739216543	0	1.4017967222107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136661125-1	2.03994570234519	0	1.37343017896888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-73113767-1	2.18414527767719	-1.09793507421332	0.973113820223385	-1.12826994273012	0.259205933302173	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56540989262661	1.15658857927843
Merged-chr13-119614722-1	1.60992516052316	0	1.39177800653296	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122446825-1	1.75576095864015	0	1.47115178420931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75131507-1	1.32415771378219	0	1.60034881690974	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88692438-1	1.17070240448296	0	1.55756507636264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-22931536-1	1.92541033658278	0	1.40151448631241	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38940363-1	2.49561278332656	0	1.43919997755011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-86443503-1	1.07265096640596	0	1.72962037172174	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91475130-1	1.4354524732803	0	1.59502215530848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-44708609-1	1.6685227415975	0	1.50616648455445	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56322950-1	1.66054095027295	0	1.47718253214116	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97155686-1	0.971702810626862	0	1.57989670373457	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82469839-1	1.47653426581987	0	1.47784098185376	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49372189-1	2.21101448028741	0	1.34885493457706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93135564-1	2.35300111227904	-0.588067525045083	1.25161913330562	-0.469845426133708	0.638465456975634	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04563255395932	0.563523181795778
Merged-chr19-53774114-1	1.70442419621783	0	1.59232497955933	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-178983971-1	2.93345041916505	3.64886151416097	1.33186281726986	2.73966767961931	0.00615013342315021	0.0763317414376398	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	2.57794411337625
Merged-chr11-22987470-1	2.69324098074753	0	1.36176302259728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135160222-1	4.25109086480229	1.01625749372897	0.968000218062253	1.04985254627661	0.293785911955133	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63272123222216	2.63357992545343
Merged-chr2-31767974-1	1.11361222258953	0	1.50276078926656	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-14838907-1	1.11608429444769	0	1.66389065517756	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-17741085-1	1.91880436251007	0	1.39409879501899	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33439330-1	1.73404263078137	0	1.44756771850269	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37185433-1	1.34697600648276	0	1.72387662118216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-60667121-1	2.19636564042227	0	1.39261231161922	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38446374-1	2.68189587134853	-3.97340504027472	1.20038579081143	-3.31010669293979	0.00093260415280932	0.0180615243284461	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71726192785673	0
Merged-chr7-34676338-2	7.11400976490981	1.71193701952035	0.848425338275853	2.01778157993172	0.0436140141019215	0.336521592337249	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.998607330878732	2.59740610925562
Merged-chr6-125640743-1	0.949890206702577	0	1.53921254816737	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-152368976-1	1.93781149278167	0	1.5071132050646	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94587560-1	2.4045273634178	0	1.40021876086426	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110676257-1	2.1467679986508	0	1.45393811683237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102959040-1	1.79709746643632	0	1.51559373496226	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40480217-1	0.812074324780963	0	1.97605439576815	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102930768-1	1.22613110483178	0	1.45731802234351	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-32997028-1	0.81179900693463	0	1.73286443649575	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-65701082-2	2.21652304165389	0	1.46695409167545	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-20662470-1	1.19386059760235	0	1.43464467225507	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35643419-1	5.64767008516415	0.922888333227259	0.725785759765491	1.27157128782115	0.203525483677244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73464037859355	3.63707381831914
Merged-chr6-89606142-1	1.67491274448139	0	1.50414933953292	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-94559616-1	2.20916424663363	0	1.36523887963384	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33966866-1	3.82994909465345	0.995322385297801	1.21669687253261	0.818052883809912	0.413326990888792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.962787828536906	1.31470332505763
Merged-chr8-120335545-1	1.56135301920576	0	1.47226211650693	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-50905451-1	2.55749288834552	4.03106275709382	1.27125118683431	3.17094119466039	0.00151945899122059	0.0262118709715683	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.64254215594465
Merged-chr8-106527408-1	3.15335535499375	0	1.34655648443327	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-164864744-1	2.63915451839213	0	1.38460110251873	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-151942709-1	3.01232467747455	1.39986336805773	1.22564860718747	1.1421408712486	0.253395469010964	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.390599903097197	0.683637474991079
Merged-chr17-79786477-1	2.64410773530327	0	1.35820231130092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146784795-2	3.32797558113415	0	1.32899225466889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13982401-1	2.4842221938769	0	1.35464325003844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104035092-1	1.78776718732637	0	1.4176060559541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47546328-1	3.1274312705252	-1.52571601136452	0.955984668919662	-1.59596284435052	0.110497089112864	0.6687501167109	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94093488503207	1.29606516661881
Merged-chr6-3509930-1	1.95645404959951	0	1.36221739207447	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36668748-1	4.97674833658482	1.24832721944587	0.856212936860498	1.45796351083312	0.144850601019249	0.807766459652147	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1937034147619	2.65182216023706
Merged-chr2-27734515-1	1.92673794533334	0	1.41330503938846	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-9129064-1	1.30087951449382	0	1.49927606585326	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65444212-1	4.46804675852019	1.03354369064295	0.939011143658668	1.1006724442225	0.271039243372043	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09528392916994	2.58511711566533
Merged-chr18-50100024-1	1.94296556834103	0.0932866570174456	1.51410441069914	0.0616117728462139	0.950872001380338	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr10-95297238-1	2.52199023608704	0	1.41694901983035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47676724-1	1.81627705104575	0	1.44641502877384	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167276734-2	2.97735838608494	0	1.33716091612932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-14164184-1	1.13378012018976	-0.355114320410835	2.446858006257	-0.145130742978445	0.884607645861821	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04930736055971	0.73596151290311
Merged-chr19-25134083-1	2.39195735672128	2.19002499908681	0.997775837278112	2.19490682903396	0.0281702818614007	0.244032753487407	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13719410764129	3.17829743477451
Merged-chr14-51237060-1	2.42464445487289	-0.329699245824583	1.28465396813754	-0.256644399193795	0.79745329704569	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24145067700844	1.07982873328226
Merged-chr14-57856308-1	2.20127799913678	0	1.36293144139414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155096094-1	3.27655048029681	0	1.39282247426186	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134357048-1	4.99278678930768	-0.0990190396752587	0.99729385075928	-0.0992877270825159	0.920909822635493	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86854705425471	1.98376133073541
Merged-chr9-48432643-1	3.08155358257018	2.49677169395615	1.22880469858733	2.03187023684604	0.0421667943485059	0.328144735440927	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr14-70106790-2	2.36928448983883	0	1.36146677969969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116625954-1	4.24114276494344	2.89782305126162	0.994760138458933	2.91308722497756	0.00357874622559963	0.0504706564672278	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	2.27643187026249
Merged-chr19-55850921-1	2.4058435950598	0	1.35812321656016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67337407-2	4.73055289215717	-1.5556060366476	0.797640840612042	-1.95025875988742	0.0511452853844604	0.376876389121893	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.13498277929629	1.24302299519605
Merged-chr11-85925614-2	3.06313881327978	0	1.32269797082737	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117769152-1	2.18351405320625	0	1.40842140762562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101679795-1	2.8599551843602	0	1.32821556925627	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-28943650-2	3.35595826772943	0	1.31755419025876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-105275391-2	2.68444636746943	0	1.33910863129346	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19818100-1	2.56895186085804	0	1.3218486048152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-43950152-2	2.69164654741633	0	1.33907693076432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34169482-1	3.66181599655356	2.43976218541015	1.16925148369675	2.0866017443027	0.0369241494912757	0.297955726433304	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.46928333126936
Merged-chr7-38061668-3	13.960993129425	0.875684563193858	0.438116337625599	1.99874893490548	0.0456355254387693	0.346895549502004	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93446334327354	4.28767312337587
Merged-chr12-82220875-2	3.16819725745208	0	1.35475342317424	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-128321158-1	3.03019416256927	0.105220207165273	1.33715533088839	0.0786895918033445	0.937279524346363	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr13-69514875-1	1.97832998734247	-1.17151819402938	1.14298630347108	-1.02496258307878	0.305380843007587	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98105407831273	1.10669213789164
Merged-chr9-114789836-1	3.1791006526774	2.50426582145803	1.25874712759077	1.98949079331857	0.0466470570179491	0.352515159927709	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr11-26603186-1	2.42382117979818	2.51062745058094	1.30165227960037	1.92880041000792	0.0537556449289416	0.390779438594573	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr17-81581349-1	3.29122520374258	0	1.33831535195387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34901877-1	3.35897428136943	3.1325858479099	0.910441616770672	3.44073226685436	0.000580142272045496	0.0123364714966108	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	2.51070657633612
Merged-chr12-21320191-1	1.97236045774786	1.84042573207344	1.3349856741137	1.37861084786195	0.168014770109188	0.898097125046298	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	1.78481374055866
Merged-chr6-72149799-1	2.5285584526877	0	1.38802619949877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-64611213-1	1.63145154281933	0	1.47337765073158	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73534722-1	1.82826209733556	0	1.37357190119624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119434542-1	2.68630360129331	0	1.33414398772353	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94801188-1	3.38837592024161	-1.69502281318881	1.28512077783169	-1.31895993157058	0.187182508296412	0.971921190873049	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10540608036231	1.31734301959449
Merged-chr1-121314961-1	1.70195329441011	0	1.4325376586398	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-89017900-1	3.86676401189311	-1.88308330551163	1.28147187810118	-1.46946908292821	0.141705601623558	0.796618568796716	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19463283453277	0
Merged-chr12-114361881-1	2.95445250009711	3.65375782422214	1.37544956172836	2.6564098938175	0.00789775537545579	0.0920925629487035	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	2.33656249313791
Merged-chr4-132753115-1	2.20288904974583	0	1.41410644111983	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-89547988-1	3.08532404388102	2.62532766712225	1.18805535490319	2.20976880941392	0.0271212114531846	0.237006023284517	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	2.89417081547303
Merged-chr13-37801358-1	3.97380836419795	-0.477306462692834	0.823900531515896	-0.579325348673627	0.562369664578854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39219079468056	1.58656857412163
Merged-chr4-140478124-1	1.95762037354281	-2.81307486159278	2.34895083691776	-1.19758779851009	0.231077528520655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60065289088778	0
Merged-chr12-40712502-1	1.34511594215638	0	1.75655464110393	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91061165-1	2.62544311629884	0.643713817626342	1.21179010657567	0.531209005696024	0.595273952999936	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40920439636596	2.53350380922037
Merged-chr12-34554000-1	2.00962587536842	0	1.46732650176576	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-27676953-1	1.62510752730672	0	1.41400464351773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27684192-1	1.72447276718904	0	1.36623387474634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90032339-1	2.25159108326242	0	1.33515876785976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-113587737-1	0.918755298932255	0	1.57255126940426	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34852326-1	4.28679605802924	-2.16404620197344	0.901881006138576	-2.39948084863085	0.0164183386420502	0.160489567225642	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1119122742193	0.989878296978726
Merged-chr6-29649917-1	5.20416842409692	-0.481798564946074	0.659515326658671	-0.730534296127778	0.465063657216773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73458218925637	2.09282686802642
Merged-chr4-86553452-1	3.04709668106877	0.334668415359767	1.13493123114871	0.294879906530579	0.768085622066748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61110391110631	2.22392366263603
Merged-chr7-30206712-1	1.18630416057525	1.69631436201226	1.85190224331253	0.915984830267304	0.359674851410341	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.729295484888209
Merged-chr10-67760690-1	2.62996174330266	0	1.33219134563895	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121720882-1	2.4517352974361	0	1.43986846310329	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-51484268-1	1.61242822421654	0	1.50131377492192	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13561459-1	1.09439134623855	0	1.59869257308722	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77359691-1	1.26228534269937	0	1.55896801589493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101131743-1	4.83655310870774	1.5224720082433	0.87722479574137	1.73555514576696	0.0826425227807333	0.537616554866083	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29180995470528	2.28465449304378
Merged-chr14-115757033-1	2.35684719313546	2.63316772285121	1.49269656486669	1.76403415458142	0.0777262290359564	0.51465175423889	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.585260691772673	2.31387409893957
Merged-chr2-181527765-1	1.93481743765299	0	1.45909824595883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34180004-1	2.52075613806934	-0.958791456389287	1.0113015154187	-0.948076752354441	0.34309038226965	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16475544641925	1.31470332505763
Merged-chr8-88242067-2	4.97814339620171	-0.740901141596408	1.13540483893677	-0.652543582860026	0.514050566937514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5290273700234	0.986577844696341
Merged-chr6-51209175-1	6.24966844919993	0.956933877967166	0.684843057136891	1.39730390487975	0.162322202086119	0.876464367299349	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00629223279599	2.98217603637558
Merged-chr17-33986064-1	2.43140121004064	4.263839511364	1.38982024077185	3.06790719136171	0.00215563554825983	0.0343231385323067	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.61896726489383
Merged-chr7-119881382-1	3.77095980561911	1.94976453134232	1.29178618250959	1.50935546280148	0.131207968139837	0.755144960900635	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr2-163804446-1	1.3584658769948	0	1.44698795809782	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-4001932-1	2.38104102036982	0	1.38260162171908	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-147404719-1	2.03792922202629	0	1.52286501911483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74822837-1	2.35673051558674	-0.139015020635096	1.34478979893385	-0.10337304814872	0.917666901991917	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59170555200488	1.46928333126936
Merged-chr18-65207693-1	1.74982810997943	-1.53673901804272	1.48715308205029	-1.03334285931349	0.301443476754133	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.792886178910224	0
Merged-chr2-21909720-1	3.0951453902687	0	1.33150878013871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-72364722-1	2.38821118966677	0	1.38081861605555	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101641223-1	3.05072325501189	0	1.43119269104637	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140181616-1	2.05006848517513	-0.332311965898006	1.45001859210373	-0.229177727587533	0.818730782742318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64955086865654	1.71756895783173
Merged-chr7-125626935-1	2.25869195858377	0.884021020259023	1.20554271140861	0.733297138204329	0.46337722011625	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27155739056623	1.6950503635711
Merged-chr3-9946335-1	4.58844478226213	-0.604436336900088	1.04471074438265	-0.578568125340061	0.562880617371572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88968071462787	1.56070666783485
Merged-chr1-97673623-1	1.59041558995201	0	1.47409545291206	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101907399-1	1.66315135844216	0	1.38000811737497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-42159685-1	0.917985077325007	0	1.81343483102606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57035773-1	3.00096035225149	0.181225096057135	1.32553415745313	0.136718541003379	0.891253273549895	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16340802384234	2.64751895429196
Merged-chr6-91281305-1	2.03031631119655	0	1.4446546048418	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-89994043-1	1.44314242900065	0	1.53266696493025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65424881-1	2.4091363979124	0	1.47368836240437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19522394-1	2.16464271308025	0	1.38350708846553	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27800916-1	3.63217370985398	-1.01954335452386	0.933409580572514	-1.09227864781344	0.274710642561268	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91003293366712	1.33962963608869
Merged-chr10-50699132-1	2.36934251234098	0	1.34789945634867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90448990-1	3.32300172349892	-0.346562244308079	0.822007640525892	-0.421604650884218	0.673313610986319	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91712999417601	1.41959898789419
Merged-chr10-8765075-1	7.49302982659795	0.719718250587103	0.610260320963133	1.17936268484771	0.238253787186942	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14265687039002	3.57876760013094
Merged-chr3-114230907-1	2.39551158419338	0.142585861496917	1.32207786165159	0.107849821582213	0.914114821431293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80266355060047	1.65917935940748
Merged-chr2-145469532-1	1.56639834786724	0	1.42454880142744	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-32612275-1	1.1102803689571	0	1.62924053724372	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106193169-1	4.32924955493606	0.566311775955171	0.817155222179435	0.693028399726505	0.488291729146404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85873895185198	1.92245040002336
Merged-chr15-59509212-1	2.33303483062685	-1.70679797152275	1.24305101217695	-1.3730715431651	0.169730106621109	0.90510719334609	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.41959861910694	0.306240821987646
Merged-chr10-70266616-1	1.39397712593238	0	1.79474367069428	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124054600-1	3.07083289985694	0	1.36888362519208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99433065-1	2.06981978410693	0	1.39794259343342	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47022667-1	2.70685355077108	-0.0116895790359326	1.04792625307589	-0.011154963435281	0.991099811478888	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43002306404934	1.65215194967867
Merged-chr16-90072912-1	2.52677713097487	0	1.33200339808291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-13343919-2	3.04288989439895	1.25570526638621	0.878488510070239	1.42939293114466	0.152891328998252	0.841262780794861	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25221160159353	2.03247245696714
Merged-chr7-90139818-1	2.7351413807551	0	1.38080433509487	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-57762784-2	4.97117641346393	0	1.31685619105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55550930-2	2.58791692979403	0	1.33045192244111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25192072-2	2.68008990301368	0	1.33913061509266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36589190-1	3.47599592153006	0	1.32166031406662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-15665249-1	1.88116560249303	0	1.49617819229664	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-154823237-1	2.53496934786235	0	1.37825751467748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-29986757-2	2.91526058093868	0	1.35067547573645	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-19853398-1	2.6568015608032	1.39756834509172	1.48322991812318	0.942246598464078	0.346066401552054	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.869935478824964	1.52489444364345
Merged-chr12-40569737-1	2.65684286533065	0	1.44578744349969	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-102399177-1	1.47462692599737	0	1.50045695734673	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155336426-1	1.47871922642045	0	1.43079030412903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-30840286-1	4.12627784511775	1.15281492239078	0.921625179075006	1.2508500728548	0.210989182237008	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993097246198059	1.31734301959449
Merged-chr17-23654664-2	4.72088331657602	-3.95967246660857	1.0646841086278	-3.71910544594484	0.000199929581991964	0.00546864732726953	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84976336607024	0
Merged-chr6-52957866-1	3.19451612351848	0	1.34448353023025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31531990-1	1.74725047086194	0	1.65879247346967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85698344-1	2.24996927937409	0	1.36033245663916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79751770-1	2.65613813015585	0	1.40171850192184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28809558-1	0.87377569652768	0	1.55870703303691	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88471723-1	2.41063133965526	0	1.34983660542802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106234491-2	5.47327421883755	-0.905759188511783	0.97078573924236	-0.933016578116066	0.350811408867421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70184640195567	1.69486619385668
Merged-chr9-52287581-1	1.89093998535776	0	1.42335717981711	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35450413-1	1.53781035228955	0	1.67911046938068	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-50377074-1	3.8456976805679	1.57372971654329	1.00422552326252	1.56710786580147	0.117089480939896	0.697668388939404	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716345901999145	1.42690496303314
Merged-chr8-111581695-1	2.21344587908375	-3.591345474656	1.17947411274864	-3.04487011273757	0.00232780817274201	0.0364429690598945	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.53461218399417	0
Merged-chr2-57335617-1	3.16620018884788	0	1.37033550691755	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120582322-1	2.40985007452233	0	1.38287346776801	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-39852825-1	1.66269912533037	0	1.40070805480258	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-63897683-1	1.29295123274042	0	1.497349041655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102389919-1	1.85630523027059	0	1.46109480133744	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-179432698-1	1.53908613340818	-1.17191984735753	1.77270134922623	-0.66109265831442	0.508552893248181	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr1-154086214-1	1.30400845115849	0	1.88910412984239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-104030993-1	3.04885877956009	0	1.36759138804319	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-20797860-1	1.90695371934189	0	1.51261742272198	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62353975-1	1.17799853023972	0	1.60097089430249	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101992676-1	1.74495398044581	-2.1086430235532	1.45947414829624	-1.44479641932321	0.148515077155552	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24015871505851	0
Merged-chr11-8717018-1	2.14235704366505	0	1.43957200230364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-46905073-1	0.894470335975648	0	1.58509587346578	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150188425-1	5.65057388398433	0.786027588314421	0.640800762368329	1.22663335388265	0.219960427142191	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.85717000683571	3.58458746821983
Merged-chr10-75221649-1	1.94436706315274	0	1.39928389604218	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-46521024-1	1.4958623392337	0	1.39788336130634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95948774-1	6.09335287789522	2.05999888932371	0.824857835440758	2.49739870413301	0.0125108203069349	0.131330452012364	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55766396310022	3.20062585554184
Merged-chrX-159810511-1	1.19408637746011	0	1.62529150935199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116430112-1	1.58076957731149	0	1.40783899513245	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-105317590-1	1.27545593865327	0	1.68745827108499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-84048438-1	1.86814094428084	0	1.56019939848748	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55766132-1	1.18680819778466	0	1.71333921257787	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44136069-1	1.70400168481394	0	1.43791417015161	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137481340-1	1.75206977924365	0	1.45108103874263	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-72644793-1	1.74908119807493	0	1.54050268664352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46965170-1	0.97477777485594	0	1.68599474082876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20263193-1	2.74292956162934	3.21273127521671	1.12899958023051	2.84564434874347	0.00443216661688315	0.0592642438606193	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.82306449654395
Merged-chr1-131678769-1	6.04689619202704	-1.00840405975496	0.796832918562695	-1.26551506126766	0.205686752810222	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27212649611261	1.4217268527323
Merged-chr2-102201679-1	2.75458074343716	2.59902637785034	1.14660785181685	2.26670903546672	0.0234080060934952	0.211946732185886	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.20275690226768
Merged-chr15-64140273-1	4.84327790879768	2.01369975753131	0.970349738463829	2.07523089635622	0.0379651404501446	0.304260657956369	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49259341981893	2.97376143277691
Merged-chr14-31237219-1	1.56924422303024	0	1.45493428214129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-190996448-1	1.97487302021298	0	1.39234100578047	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-22129793-1	1.3748229964832	0	1.54910496534419	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129901152-1	2.84504466291911	-2.09652077759446	1.1517655339826	-1.82026698641091	0.0687183563302222	0.468929585709555	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5646068381379	0.666688015277142
Merged-chr8-124955946-1	1.546978979586	-3.86249046053327	1.35896102959618	-2.84223783935954	0.00447980577183843	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42761525507112	0
Merged-chr19-47259752-1	6.74482360321268	0.378435746078213	0.653916012172434	0.578722250310062	0.562776600065811	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.68599633547893	3.2180769473006
Merged-chr1-171888285-1	4.55777145517648	1.20216994973487	0.871663130608328	1.37916806105575	0.16784294304752	0.897313667379796	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10209085547629	3.08074679528142
Merged-chr10-91033434-1	3.26000094150422	-0.510264362864905	1.17018305298382	-0.436055163817146	0.662796706507254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7694204639404	1.78590048821142
Merged-chr5-129999261-1	8.20375034559241	3.10259744985011	0.735029749983854	4.22105016826634	2.43166805876596e-05	0.00102859133467881	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12740138490787	4.51188125539224
Merged-chrX-109163974-1	0.90846555083132	0	1.62947669918231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-159182688-1	2.82975815976085	2.89226088609902	1.35447100327987	2.13534352459031	0.032732960135551	0.273980788141119	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	1.97028759951809
Merged-chr6-134636210-1	2.50889741780535	0.769894004775296	1.54534987031025	0.498200452575007	0.618342763502103	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.688405034366054
Merged-chr1-170478385-1	1.21033759767231	0	1.50101387791641	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75810107-1	3.75203927003933	1.7718929627971	1.15851108604513	1.52945706272514	0.126151175618998	0.735091136789497	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.30083272599378
Merged-chr3-100732099-1	3.34170951802809	-0.0114536803187206	0.890768337338673	-0.012858203237152	0.989740920852913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45657482526684	1.19133112147929
Merged-chr14-56304386-1	1.45879198102332	0	1.62984768186123	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129629842-1	4.52191722711048	3.34846753240368	0.947971072583545	3.53224653077015	0.000412045024764702	0.0095058557773743	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785754803793435	3.25280060054708
Merged-chr8-119811585-1	3.27586114906868	0	1.34570847300293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38911953-1	0.951751792872064	0	1.72561460407803	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63811276-1	2.85743546914203	2.94279517969737	1.24120792358587	2.37091233771339	0.0177442390716957	0.170761518532181	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	2.37850366884776
Merged-chr18-55446953-1	2.53408084298786	-0.694899851380229	1.22269622893488	-0.568334010472554	0.569808189358653	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81397607107586	1.10669213789164
Merged-chr11-50206199-1	1.98057411866347	0	1.34143678458172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40617618-1	3.14062177599433	-0.0747809425067891	1.0294016529363	-0.0726450577318209	0.942088570531421	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25646154472763	0.793480537552656
Merged-chr4-88503880-1	2.20564641907414	0	1.40438470891894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97718031-1	2.08427191958062	0	1.40510519877672	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146749987-1	2.70065422548517	0.497578611206316	1.32215725169949	0.376338450336927	0.706665297568333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	0.61242769162773
Merged-chr16-33408521-1	2.43444922845036	0	1.36255317400084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-14630930-1	1.50731158939755	0	1.47889375617185	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6172583-1	1.53333022250827	0	1.40572208209757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129385854-1	2.0397361274564	0	1.34842523605612	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102880770-1	1.29754125056578	0	1.59702626754454	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-22122739-1	1.99959073455242	0	1.41676732444107	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127489574-1	4.42274441317136	0.756869722672194	1.02508704482268	0.738346783812021	0.460303743881187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04293120882999	0.900948542443349
Merged-chr17-34636208-1	7.53884969281308	1.28834803822822	0.73686751819388	1.74841203665221	0.0803927051339577	0.526756413284228	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55772511427008	3.99545268060564
Merged-chr8-56064804-1	1.78790726782715	0	1.50773591729389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58711948-1	2.72045022971537	2.87301717136555	0.998114660051475	2.87844401686013	0.0039964220625252	0.0549583748287604	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.712973448079207	2.98794568696598
Merged-chr10-121387052-1	5.9927401757595	0.71170405915024	0.823782835115991	0.863946211078834	0.387617439597515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.50628008851449	3.3931664686665
Merged-chr19-58064559-1	4.72207933012292	-2.25838403079133	0.974328223134239	-2.31788834313607	0.0204553901351501	0.190548555835862	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66029360907521	0.869764003783424
Merged-chr18-38484142-1	2.62058062891596	0	1.33347802696144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36719560-2	6.06914574067469	-1.09345123395127	0.763536610291884	-1.4320874981139	0.152118781900913	0.837744144853454	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64421258219862	1.50954942419772
Merged-chr10-99253595-2	1.97061214180466	0	1.39648103957825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146047971-1	2.28357592661775	0	1.36356655742541	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25240811-1	2.58534690011986	0.0780140067339265	1.35488601900531	0.0575797562596449	0.954083375079603	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	0.609949614787909
Merged-chr13-35940617-2	3.69435469413138	-1.75404052819787	0.901967819462731	-1.94468193914355	0.0518132705853721	0.380468589692294	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.3987234455545	1.00443616959195
Merged-chr15-89231198-1	1.92765286620342	0	1.4393807619114	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92509773-1	2.56213971036501	0	1.34355243749505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139681667-1	4.2642639522167	-1.63723105094101	0.954929117913297	-1.71450531796399	0.0864359612357923	0.555437537900884	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73302162437005	0.989878296978726
Merged-chr7-130859007-2	4.22748401759866	0	1.34545629266147	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-30727308-2	2.26288693568175	0	1.40092812612773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52729160-1	5.3426902925445	0.226710703658693	0.788231248507566	0.287619533084924	0.773637991180155	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09240390344708	2.24287124256397
Merged-chr17-45478663-2	2.45757590838347	0	1.36128971423496	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57667184-2	2.96665954438158	0	1.31881147285321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-179232213-2	2.48627044012998	0	1.366883015459	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136434612-1	3.54739706855075	-0.922900911528382	1.25500421209278	-0.735376744265581	0.462110081025584	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64215675991523	1.29684500016202
Merged-chr8-22139851-1	1.10267093020424	0	2.27864213083638	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-115662387-2	2.32834755691782	0	1.33466456429997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-158552393-1	2.18697788492337	-1.12323883507236	1.42450391803756	-0.788512281959721	0.430397117359643	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69513081147578	1.20275690226768
Merged-chr13-5302673-1	2.19427431682019	0	2.39860009238593	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77782573-1	1.87818261964444	0	1.48161108915258	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52945455-1	2.16438424352979	0	1.37273192101176	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-129600050-1	6.99387657604188	0.426653119151789	0.631289451905391	0.675843890411986	0.499139765098639	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52634673474063	2.57847521883182
Merged-chr14-54581992-1	2.07547774506524	-2.72967571625561	1.37852558699448	-1.98014149465804	0.0476876316811184	0.358548547579843	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47867056645826	0.469435083901436
Merged-chr10-52331051-1	1.5605320681397	0	1.49223579055045	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-37656424-1	1.84765477412473	0	1.37767540841284	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-119070610-1	1.5957946113675	0	1.39495562191063	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75495502-1	2.92429412866324	0	1.37902336472915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62118744-1	1.45145288466669	0	1.412362980689	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-26443275-1	3.12773701626509	0	1.34160159691889	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25250217-1	2.57396065624911	0.0789890953488961	1.45473146357358	0.0542980593510073	0.956697695687894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr11-106687534-1	1.99494426556124	0	1.35578404182745	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81016453-1	1.46712835412906	0	1.57141403506518	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134989561-1	1.30879817459112	0	1.4782863844714	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-3426011-1	1.28057607243812	0	1.57542510777286	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129854357-1	5.03749599060354	0.92121862736061	0.792593357089115	1.16228406297005	0.24512009802658	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9905647167917	2.69652264620186
Merged-chr10-67201181-1	2.72726095241148	0	1.3888769347035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-58511837-2	2.44710879440007	0	1.41274278952537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84945104-1	1.90554052796737	0	1.37170107477996	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-143368393-1	1.49030922037365	0	1.49352493642958	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15701789-1	2.12278038805305	0	1.5225020806649	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19006293-1	1.43335632135349	0	1.84463781672184	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-36211079-1	1.01408921020392	0	2.10190813307407	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3579892-1	4.94703512361878	1.72729702326547	0.71389683520429	2.41953310070521	0.0155404462923452	0.153928868729519	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57342840938092	3.49523235442522
Merged-chr13-120320787-1	1.1533239420828	0	1.47630526389623	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-136362800-1	1.71463473625603	2.78158247215499	1.30909794223604	2.12480852838546	0.0336025929163469	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	1.62319166842064
Merged-chr8-119686384-1	1.85401505915802	0	1.35408660386766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64174688-3	3.26998376863531	0	1.32552656146524	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-60138521-2	3.00851064645891	-1.99976378893358	1.25389631597186	-1.5948398312213	0.110748057418834	0.669963206821989	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07569250439357	0
Merged-chr9-115855781-1	2.44004639957625	-0.756902961985555	1.1501722815999	-0.658077901975428	0.51048807465654	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35392119927299	1.65013357957091
Merged-chr2-11113456-1	1.83165536722479	0	1.4025684482567	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8735462-1	3.77335380819059	1.17320635220703	1.06617581262414	1.10038732666375	0.271163397928905	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3195305572438	2.34781116627824
Merged-chr6-55054168-1	1.42037525253264	1.79028958039829	1.50426083355018	1.19014571174672	0.233989126321105	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chrX-159765003-1	2.22420740261883	3.37724455764013	1.15761771111541	2.91740919753725	0.00352952398307957	0.0499870555262934	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.61438578437986
Merged-chr5-139785872-1	4.20636923876682	2.41686391982688	1.02992507101898	2.3466405351563	0.0189435207994972	0.179637688312863	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27979874364766	2.94305846690019
Merged-chr1-152756650-1	1.57398595387895	0	1.46724589358344	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-57765185-1	1.60164579021613	0	1.46992133153982	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64328827-1	2.06316189329576	0	1.5698325009677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66942788-1	2.15496247226663	0	1.45485791692154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-38139122-1	2.26081407333306	-1.19879153098445	1.44404920779366	-0.830159751145924	0.406448468109369	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32405035181012	0.73596151290311
Merged-chr3-81503983-1	1.74623263733186	3.59480285626788	2.35846752110187	1.52421130420672	0.127455935090328	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.26536785917363
Merged-chr8-126751597-1	1.75239139741021	0	1.59342694796509	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15470289-2	6.04166350111087	1.35443128655146	0.918099312299438	1.47525574674399	0.140143799027669	0.790149843939782	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73892617266378	2.08209013916031
Merged-chr12-52615904-1	1.89995776532992	1.32759392205728	1.36190636540601	0.974805578253909	0.32965670956828	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.469435083901436
Merged-chr19-46985346-1	2.59394587134639	-1.19651217784794	1.26805716958564	-0.943579048757658	0.34538480276572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.895785806047576	0.306240821987646
Merged-chr2-91500041-1	2.92186488227404	-1.95572587936967	1.18965648697703	-1.64394167625585	0.100188250366753	0.621691271137553	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862813066341065	0
Merged-chr10-95262623-1	1.84030789906901	0	1.46732209692655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34282518-1	3.24895414522836	0.947239255872607	0.967473940769936	0.979085033668994	0.327537965888415	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30656404503476	2.21550655935007
Merged-chr7-39526384-1	2.61022313196975	2.65258039104905	1.41846501932479	1.87003581682382	0.0614788442641204	0.431653224162803	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.6950503635711
Merged-chr17-45029305-1	1.45422722818279	0	1.59952417830602	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71090028-1	4.35846690465316	-1.82706197747564	0.872173723560617	-2.09483721891635	0.0361854653076643	0.293736076521072	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.1983824026056	0.845523456341755
Merged-chr4-137911616-1	2.22541753210827	1.39678696954686	1.56364885211027	0.893286857635448	0.371703574158912	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.56316736972968	1.00182956598795
Merged-chr8-6634114-1	3.00536445193148	-0.00635926326047036	1.73654203506276	-0.00366202667834675	0.997078131982689	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51684905879371	0.958904680953568
Merged-chr2-32992298-1	1.13455940865096	0	1.45984887998775	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-128361671-1	3.22221654964054	4.91103473486546	1.2996119368142	3.77884705099287	0.000157556155548426	0.00453553503985349	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	3.57732336166398
Merged-chrX-140479390-1	2.3229390411129	0	1.39026370780896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-23687273-1	1.76995996138232	0	1.41768256654076	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145308921-1	3.88685391313807	3.72971785165118	1.03186752070373	3.61453168824184	0.000300891014346828	0.00749600618509638	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.631891312967452	3.03728135155531
Merged-chr8-31033504-1	2.27346677600891	0	1.35994903602463	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102176038-1	0.777847761384347	0	1.7991009948645	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54767338-1	2.06055333355119	-0.534092793184453	1.36566800147237	-0.391085382837286	0.695734124764348	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.078479929152	1.03295826569721
Merged-chr1-8141452-1	1.87040415416717	-1.05295959699865	1.50483967860879	-0.699715466017019	0.484105015851612	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30557996251068	1.41959898789419
Merged-chr19-11777411-1	1.20811839115442	1.92387063409977	1.48186184307777	1.29827935248266	0.194191358822929	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr17-17655241-1	4.05419901447025	-2.01189494917325	0.967855897628586	-2.07871332302953	0.0376437076830353	0.3022690737596	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.14388718932572	1.07982873328226
Merged-chr7-128133207-1	1.95319948077633	0	1.35519678100095	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133198889-2	5.95183955658642	3.14531280019394	0.975553760283488	3.22413067146596	0.00126355727959077	0.0228089541414747	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.881031715718093	3.44972672878163
Merged-chr4-155144440-1	3.9103957065152	2.61596846160355	1.10760144684185	2.36183192886085	0.0181848844458469	0.174085768971332	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.775524153257
Merged-chr9-119265896-2	3.37916716790488	0	1.34554716427417	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127553674-1	2.43961587704279	2.5131815368527	1.32741989922226	1.89328300587114	0.0583202438947769	0.415593746733707	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr5-64424957-1	1.76263391187274	0	1.39371937071052	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-6741721-1	1.54750996141706	0	1.45456110739157	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-73985118-1	2.80707479395964	-0.823679687743281	0.978379673564674	-0.841881439280364	0.399854320574616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83894246870612	1.08186277552917
Merged-chr11-113133558-1	1.44208657077241	0	1.53306710779596	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-100164267-1	2.31728463754385	0	1.35953278981008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-48124914-1	1.933820836829	0	1.39058949966088	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-97110845-1	1.86987805394298	0	1.5050102896055	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116512555-1	2.06596578325615	-0.672905970542276	1.1275694286476	-0.59677564276406	0.550657182049112	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16537240150116	1.35032549026822
Merged-chr6-71419073-1	1.49108638708296	0	1.4927838194757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70029629-1	1.47595105698194	0	1.51637271389214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117413525-1	1.79546790827635	0	1.44778053243235	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-106301252-1	1.12095425661811	0	1.68399449718399	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73896714-1	1.80736956209899	0	1.69355167414841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118739671-1	1.42974063118093	0	1.45374851921013	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102807803-1	6.26296955932763	0.355970473665875	0.827905442774553	0.429965132821103	0.667221004715389	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73534249173108	2.70086729228753
Merged-chrX-160604464-1	1.47658794099759	0	1.67017875088061	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-48435870-2	6.38232325037748	-0.0436826430338481	0.583294425028701	-0.0748895260428705	0.940302610162114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81315107224294	2.66613800347615
Merged-chr10-29445625-1	1.7143456049505	0	1.45933727836256	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75976885-1	1.21465503409457	0	1.50231973295587	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-67106610-1	1.38553695453016	-0.219839376237848	1.34954758618812	-0.162898573186884	0.870598294255344	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29218595271465	0.73596151290311
Merged-chr5-148809695-1	4.67198642629621	1.90684422244035	1.05601882540846	1.80569150526536	0.0709665402887062	0.480618277104445	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81425764832396	3.94785502978191
Merged-chr7-73648183-1	2.12867297717586	0	1.41899715246746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68373120-1	1.71321619919762	0	1.39572570922881	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-97956300-2	3.40401035384431	-3.34057518245319	1.14325461743585	-2.9219870460227	0.00347806005892296	0.0494726409687375	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33358229851025	0
Merged-chr10-68257888-1	4.02095612356353	-0.534105008512068	0.941774943617055	-0.567125948860714	0.570628614213388	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32132847002566	1.46928333126936
Merged-chr15-63555110-1	1.94719108321093	1.91473502279446	1.52247275635388	1.25764813511672	0.208519036989331	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr14-7850949-1	2.41392125837176	0	1.36557916455462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32932753-2	3.41305971703599	0	1.33457047629931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117839616-2	2.23438564504286	0	1.39724554948603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140536816-2	3.2055490155572	0	1.32471372957621	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-4048037-1	2.65335055201825	0	1.32876339686663	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-47439532-1	1.54318716616407	0	1.53548282477425	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58599276-1	2.27218880306765	0	1.35883030600916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-98614196-1	2.5917134185855	0	1.35714661950704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118283378-1	1.46933917290653	0	1.47267894393421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67496605-1	3.97732681689094	-1.97523239372432	1.16266108697289	-1.69888922563587	0.0893400574738538	0.569229270250239	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48097117181115	0.733321818366247
Merged-chr7-27402885-1	1.83683531073815	0	1.38568833684999	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167250863-1	2.41551915413615	0	1.39506501125449	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29853939-1	2.2036633797835	0	1.36931492437958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-43987646-2	2.18992384544344	0	1.37489015352099	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17315559-1	3.46490614773688	-0.737224850218953	1.0219890736748	-0.721362751529319	0.470686357761181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07255655118837	1.41293295987929
Merged-chr9-63037635-1	1.31854599164242	0	1.98137223441545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133922680-1	3.06161049230999	1.62998731981166	1.10920675418178	1.46950720744037	0.14169526835774	0.796618568796716	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66945349068826	2.76406665166042
Merged-chr6-86806637-1	4.97075337370873	-0.53062999633628	0.811673802427196	-0.6537478414968	0.513274275223678	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39444195560931	2.01259914296816
Merged-chr15-73643028-1	1.95062234374165	0	1.4085767065924	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-139067387-1	2.13219409214478	0	1.3932789965273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66143870-1	1.49853198823454	0	1.39902845004709	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124291505-1	5.10623418130584	0.744810780433171	0.662368673680088	1.12446558846909	0.260815560996682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47653754316559	3.5388322769015
Merged-chr4-115986928-1	4.30688354275858	3.04421227022742	0.97945368475802	3.10807169098508	0.00188312381692841	0.0310257084421667	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01276722837733	3.7266942667982
Merged-chr2-59137487-1	1.67325163620478	0	1.41986561213819	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4068868-1	2.76321903372383	0	1.31936827887239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52633225-1	2.2953560987981	0	1.35030127057035	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144730518-1	1.73079230835458	0	1.41677184674023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-116907406-1	1.95325987554909	0	1.40795016071105	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76586700-1	4.63654585436912	2.48772890697118	0.843222587522485	2.95026360036263	0.00317502914460818	0.0463114853757961	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06818841864095	3.61764137552359
Merged-chr1-127496942-1	4.61361255650872	0.382147363207192	0.909027232632932	0.420391545476949	0.674199443326799	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19405402021844	1.72189711188045
Merged-chrX-78518567-1	2.23793631492776	0	1.39954806401315	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-96547449-1	2.5571939931611	3.2849212302059	1.38190152902092	2.37710224731662	0.0174492505347423	0.168450099784794	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.31734301959449
Merged-chr12-26427948-1	2.58958403876973	-1.02508737251561	1.01005044737245	-1.01488730110687	0.310159552209281	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4956381400724	1.50690972966086
Merged-chr4-100028873-1	2.06131096729192	0	1.4204454728781	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183637142-1	1.80082499852232	0	1.36759898771401	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-111886783-1	2.66617409724879	0	1.36421620756338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81917809-1	2.23729296854293	0	1.35028748634994	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-92787523-1	1.11028695995212	2.24714186561345	1.57901715803694	1.42312694588268	0.15469935830917	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0.905469781553611
Merged-chr13-12423407-1	1.46679589712494	0	1.42732848006939	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74682738-1	4.54275876240919	0.992560047229455	0.81392389509515	1.21947525218365	0.222663863291792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77349491412961	2.87613034754277
Merged-chr3-31424883-1	0.814324959552096	0	1.77409801302483	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-149342914-1	1.63656443240175	0	1.46143447237769	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135099614-1	3.75394687879133	2.11364854874682	1.1896662654266	1.77667351775238	0.0756219718886055	0.50419277369991	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911455188998607	1.94340037943601
Merged-chr10-120364327-1	2.27035623468206	0	1.37278124572885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103687385-1	2.55119265239693	-4.22697545757574	1.13600273140182	-3.72092015338704	0.000198498197232476	0.00543632154080193	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10495354254449	0
Merged-chr3-103856008-1	3.94220128597648	2.58927027623237	1.1732712045308	2.20688129584485	0.0273223534839355	0.238467545179811	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.551622706914979	2.19361279780801
Merged-chr9-32582245-1	1.7009109415994	0	1.50557661918662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-107167918-1	1.98255499962806	0	1.36642525909693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-99088361-1	1.08447570176693	0	1.47059228719451	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47767702-1	2.90767576575845	0	1.33270794222216	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-36710529-1	3.42006126550616	4.35186367833181	1.08535957674699	4.00960545386726	6.08202866686136e-05	0.00213790341723896	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.58707500045288
Merged-chr5-100706734-1	2.4251009909881	0	1.401414110389	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8701588-1	2.04562583859892	0	1.54548713245075	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25525244-1	3.32755228976864	0.391641427454088	1.11117824182258	0.352455990149437	0.724496318274857	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76496256872535	1.91919773928489
Merged-chr11-58790901-1	3.00988948843005	-2.05493967626118	0.954109260332141	-2.15377814857999	0.0312575741317926	0.264639699477555	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08239103489695	1.04220233489076
Merged-chr4-44911167-1	1.48733225860558	0	1.53215514279323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142865615-1	0.900327293642729	0	1.97011956051584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55618992-1	0.650082229256413	0	1.76228602422984	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-44075766-1	2.88493417246304	0	1.35296201959706	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52615595-1	3.16127608662945	0	1.35975288842278	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-101265427-1	2.34849155358713	0	1.34722354792325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110072057-1	1.74243146489482	0	1.43657412210986	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-8720170-1	2.88181468241645	-2.04581008536078	1.37782034818716	-1.48481628105763	0.137592497846421	0.780072823553028	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.09677657580095	0
Merged-chr17-10772448-1	2.47146092040489	0	1.34170201693569	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50134081-1	6.21839760738174	3.48060435141662	0.986711199839419	3.52748033262729	0.000419534927430887	0.00963279317213588	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	2.60946488036042
Merged-chr8-83257829-1	3.95668562937154	1.34238252816767	0.94474080580906	1.42090033574667	0.155345735390484	0.850469107548546	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79324684247815	2.48626511518304
Merged-chr2-164928446-1	4.38054138698406	-0.702157729669625	0.710829603893161	-0.98780034740247	0.323250437394824	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91436251162449	2.05066483796074
Merged-chr17-34578236-1	1.86630528279909	0	1.3594207304629	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84598377-1	1.91693709510268	1.38182680240654	1.5218303595146	0.908003177730849	0.36387654274864	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.609949614787909
Merged-chr10-81518690-1	2.04798185705647	0	1.35431943341727	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-118898268-1	3.44848375556513	0.0320312686090296	0.883531381721993	0.036253685235946	0.97108007946847	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04719112513297	1.97815176992225
Merged-chr16-92732635-1	2.03028030438428	0	1.38133474919859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34857454-1	2.1714415280753	-0.929547321368129	1.42834835728674	-0.650784744930067	0.515185449079468	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30499674288039	1.08186277552917
Merged-chr12-35262602-1	2.14133220467782	-1.16697137126439	1.48164711546984	-0.787617617636523	0.430920406437875	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0
Merged-chr15-21692266-1	3.63398388515569	2.57109172222211	1.10792489064325	2.32063720558653	0.020306432406035	0.189428141613813	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.71679440032313	2.46523198860284
Merged-chr11-88951077-1	3.69318675445621	1.47845970416425	1.16359144886641	1.27060035169955	0.203870861781359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11328791473986	1.95563186934823
Merged-chr9-21454782-1	2.2013203000161	0	1.37156792669113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-142967462-1	2.14281459506633	0	1.35350637758643	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105927216-1	1.40365224769175	0	1.48858826157377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-105836185-1	2.32843470949768	0	1.35110719304185	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13166705-1	2.01825338718032	0	1.41609302141939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15999713-1	1.6161622700996	0	1.43229076560085	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8437454-1	3.27117563040509	-0.0283963402579484	0.925902125529204	-0.0306688358034802	0.97553364489186	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15366242614855	2.16286647593625
Merged-chr9-116112683-1	2.8038413245068	-1.04183127427553	1.08639083801552	-0.958983855367022	0.337566878461913	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44962763321084	0.961728545204858
Merged-chr11-16619273-1	1.55334335094845	-0.81322073409076	1.43933635095051	-0.564997009596627	0.572075798181951	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26849901808708	0.887107926668329
Merged-chr6-32400730-1	3.34844412674124	1.19094803015734	1.14581946882559	1.03938540281394	0.298625530089611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21621996599167	2.30166531184945
Merged-chr7-125586726-1	2.77515221826806	-2.4628317324343	1.36988768264458	-1.7978347886739	0.0722031926111225	0.487013813415195	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33273220709808	0
Merged-chr15-3338699-1	1.51250716186956	0	1.69810365653655	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75687558-1	1.88559631600129	0	1.41672158283905	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121477428-2	3.57475594112336	0	1.31768660621559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59342062-2	2.6253595204894	0	1.40861877033428	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-6480562-1	1.5798305785196	-3.42701637297483	1.40024900946266	-2.44743352776228	0.0143877661963891	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09313069913325	0
Merged-chr9-70841567-1	3.03378278053733	-0.779953995890473	1.04910742682639	-0.743445309742855	0.457212121030301	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43088467128195	0.73596151290311
Merged-chr4-95843032-1	1.27261931947199	0	1.57427683130776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88175437-1	2.00210030296096	0.45724937349133	1.2801876768984	0.35717370331133	0.720961770965366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00572841130107	1.26501898168246
Merged-chr10-122528434-1	1.3208914346608	0	1.45906496347199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129065737-1	2.27825717320828	0	1.39713641218876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-77061614-1	1.82799557678274	0	1.34821320802834	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52472071-1	3.88508570258535	0	1.37453533422804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59282618-1	1.95691530938996	0	1.42736797626763	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-21271399-1	2.58321178236446	2.18711996427761	1.29093068611478	1.69421951759472	0.0902235773749368	0.57390773442036	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.957089151783903	3.43250738636416
Merged-chr12-34777168-1	2.05526481586149	-1.62643275190181	1.16000495914758	-1.40209120579707	0.16088801283198	0.871323395202934	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45001611566568	1.04885222765555
Merged-chr3-59201589-1	1.36674165204503	0	1.45180851580716	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31400537-1	1.1900289585254	0	1.53215469226012	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101599508-1	2.14538283731267	0	1.47655778726411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21514892-1	2.34236510994694	0	1.41333842852202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70117336-1	2.32191968348331	-2.05878751112827	1.32313213627053	-1.55599539508677	0.119709187382563	0.709284348975053	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.81635835172392	0.73596151290311
Merged-chr6-115524634-1	1.39008882608311	0	1.3977317758329	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-150834066-1	0.789538269936338	0	1.88895199334277	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115184147-1	4.14818495540202	2.92792889864505	1.11687190972796	2.62154404022768	0.00875324520815882	0.100033151691561	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	2.71691836698322
Merged-chr10-69308089-1	2.46731147979813	0	1.36600550384339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55210281-1	2.21461017137125	0	1.36666730496623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122474308-2	1.89037838567304	0	1.50202144655569	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-44780846-1	2.82294835574601	0	1.31871987028797	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-54758158-2	3.10533166756489	0	1.31672391124778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23917069-2	6.21093936563214	-0.704157498268553	0.75946493119169	-0.927175790939612	0.353835270127254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.04606637569234	1.99521245973132
Merged-chr8-125176522-2	5.20671915158182	1.14828793095797	0.742166504594097	1.54721066479009	0.121812455144692	0.717594547665935	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01928321039186	3.72825486667633
Merged-chr9-121458591-2	2.44139746343979	0	1.37360746596616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-137397520-1	1.89951822302264	0	1.4934934679315	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145928340-1	2.19739090764248	0	1.37643475286253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157416001-1	4.17629145630879	-1.19581358357499	0.874932728520231	-1.36674917350213	0.171703938948856	0.913393586499021	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70062613352473	0.900948542443349
Merged-chr2-52942995-1	2.10269048041406	0	1.36630019092003	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21425936-1	2.0434769088846	0	1.5375925062697	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-37395842-2	2.53227222407089	0	1.36267392352696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115306368-1	4.61086807220415	-0.78549609009874	0.96172811622869	-0.816754836261807	0.4140685468413	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95528712152724	1.34805514843284
Merged-chr2-172477028-1	1.09292884467006	0	1.5339330661499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59622778-1	2.5110103018832	0.0980648615642638	1.33016783397548	0.0737236753584521	0.941230259837305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr9-72955764-2	2.60162448767559	0	1.39117646810011	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37600979-1	1.56022330410409	0	1.42965607659409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53204895-2	2.07612372815884	0	1.41398134850291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112767650-1	3.78649834926199	-0.695947882609355	1.13114336050533	-0.615260546902245	0.538382668055068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16567463709254	1.31345086927531
Merged-chr7-33982498-1	1.85095560836796	0	1.41078926582523	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112397679-2	2.51525939920023	0	1.36258597231609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-4098499-1	2.78936533664683	-2.32870526196474	1.20680697620727	-1.92964186309508	0.0536512279919705	0.390237438152639	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10582512976063	0.73596151290311
Merged-chr13-54983990-1	2.62398233628942	0.482500551227186	1.29881868752482	0.371491845522098	0.710271228454178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18703110448508	1.31734301959449
Merged-chr14-105198684-1	2.9947662948255	0	1.34106341890914	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79568643-2	2.25143681222238	0	1.35293409163527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24920557-1	1.83926723123256	0	1.41925230476387	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-83384266-1	3.38467644200781	-0.0855159087017255	0.833213323412336	-0.102633870941363	0.918253559656122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90970151703079	1.87744667331019
Merged-chr13-20185684-1	2.1876196041382	0	1.37917176432071	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105701029-1	2.68033657473084	0	1.3839595937042	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50581379-1	5.72320071786126	1.26516723495929	0.902319443193279	1.40212786558373	0.160877067276351	0.871323395202934	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59515539074881	2.39268946214402
Merged-chr19-31756221-1	1.24703764795251	0	1.63140410145727	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117970847-1	1.25154495813929	-3.26994719312257	1.49189775965246	-2.19180380958833	0.0283936759285065	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02497565236999	0
Merged-chr12-26461596-1	5.34944445544302	0.174891233041099	0.778189451227754	0.224741202499175	0.82218060945773	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29365731010568	2.04227591496094
Merged-chr5-120522871-1	1.74413125257114	0	1.39772939730664	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-52971253-1	1.50944093395656	0	1.40857670751472	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-112775011-1	1.03254356308223	0	1.81537896665169	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8747409-1	1.76698416003435	0	1.41433368226328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-18588476-1	3.30924877990249	-0.876254183498324	0.976316388388182	-0.897510472957386	0.369446587497998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16537240150116	1.34574950999398
Merged-chr1-23897423-1	2.55207169914605	2.38259579817987	1.29495091012031	1.83991206119042	0.0657811489783104	0.453958703256592	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0.735627456805112
Merged-chr3-81135973-1	1.75897595152585	0	1.49073153783165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-111171410-1	2.10010002565428	0	1.41539924744296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-88982476-1	1.62918235510849	2.13059039766034	2.06495848330777	1.03178364837991	0.30217348102011	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.76302217368042
Merged-chr13-63702905-2	3.90431313940841	-1.52974563322125	0.959274408903455	-1.59469033993089	0.110781499296694	0.670103476167895	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74272527072201	1.15307255889252
Merged-chr13-54593829-1	2.24376646310884	0	1.40099602320962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-79595069-1	1.48130830493215	0	1.48289064856846	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55085144-1	1.88073219529574	0	1.36802713013278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85658524-1	5.7009937245772	1.13630938443129	0.798859086816392	1.42241529599382	0.154905725260038	0.848844404431233	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35364172265143	2.94434536189135
Merged-chr2-146623426-1	1.42586336807211	0	2.00745210168704	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68072114-1	3.80069952637606	-1.5086089369601	0.871888642642661	-1.73027708261868	0.08358078205662	0.541921494599647	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10870502498324	1.59982791176663
Merged-chr17-4778373-1	2.92704503512061	0	1.34944697419277	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137967664-1	2.67510790785008	2.60258583208021	1.3665846249771	1.90444542146362	0.056852198417899	0.407890179821698	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.543422078079461	2.70769829698481
Merged-chr9-110897036-1	3.73624780954072	2.68990517167851	0.949781820523206	2.83212956234172	0.00462391086653609	0.0612888599360379	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07689090166681	3.20769124048265
Merged-chr3-144242262-1	2.90392833961668	0	1.33508653434919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83398237-1	1.40906612173141	0	1.57105374942968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67105182-1	1.54580114292278	0	1.47109271720129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-186610139-1	0.865104714205914	0	1.93570221358005	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44124046-1	1.45674694881642	0	1.49717324589875	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34299696-1	1.24170549174653	0	1.4204776401227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72146550-1	2.5268081907836	3.67805080633634	1.20477802639341	3.05288669427915	0.00226651499956343	0.0356972015332542	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.775524153257
Merged-chr7-108944113-1	1.78194778829509	0	1.4135570386795	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91509192-1	1.57971702986166	-2.21576002712841	1.47432383753273	-1.50289913974156	0.132865054899482	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21860784935357	0
Merged-chr2-157099680-1	2.36421408117229	0	1.39889057209521	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-95270583-1	1.6577803414276	0	1.42536030921401	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35584463-1	4.95996098250955	-1.25930370065138	0.78739616297273	-1.59932669203901	0.109748031635182	0.665595934536925	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20035666526986	1.87822650685341
Merged-chr10-78493682-1	1.75245880476793	0	1.35385940610793	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-38484013-1	1.67846485424476	3.55489959618428	1.49527814698475	2.3774169396863	0.0174343689781066	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.96490577938442
Merged-chr7-110394144-2	3.23103850789868	0	1.3329574583309	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-10268563-1	2.44142456385605	0	1.37736978382892	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54080476-1	1.75811952027812	0	1.40871333211459	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-73548817-1	1.47498349013012	0	1.39157003330962	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25112315-1	4.41491156578549	-0.416849091897805	0.929107144759777	-0.448655565990274	0.653680143006405	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83679961447486	1.26501898168246
Merged-chr2-18916124-1	1.68187686019414	0	1.5017672616745	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160673657-1	2.37240719406785	0	1.36931422852382	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76734854-1	2.73355239382416	-0.741754686378841	1.39236974087178	-0.532728243515561	0.594221712138128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00382132768927	1.79795952835561
Merged-chr11-54879052-1	2.59303017950189	0	1.45124527822234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-65888339-1	1.13146878753903	0	1.74901989980606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-85117920-1	2.4214184521984	0	1.32978624415949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-52460547-1	5.79723454685095	0.402847766053039	0.872745297029547	0.461586865519827	0.644377615339771	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.823174073449	3.43204988179119
Merged-chr6-129095406-2	3.53026131945996	0	1.32746325003006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115374312-1	2.16766688053679	0	1.38493726033809	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119442304-1	1.42509185477382	0	1.5121546740262	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127979065-1	2.89692917759136	2.19801836684845	1.11364255369234	1.97371980763559	0.0484136116206772	0.362552815146089	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.960109972734806	2.33937007872476
Merged-chr1-88697515-1	1.54156819415575	0	1.43459420223822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65119629-1	3.05828608085613	0	1.33798640189738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18949343-1	1.50326384630592	-2.17863427471364	1.39000925222891	-1.56735235482796	0.117032354105074	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29263445103863	0
Merged-chr7-81204803-2	2.58906068269293	0	1.40169776020903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62013688-1	2.02468582369254	0	1.40861662283134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-121970157-1	3.20528142231998	1.59439110000266	0.823486000976635	1.93614839610114	0.0528495286023859	0.385836351422106	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66177704295349	3.1491193207941
Merged-chr7-121080153-1	1.30536562246634	0	1.43162305874029	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46574685-1	1.29510263606091	0	1.72794511389368	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-12536440-1	1.44996256634376	0	1.57424180631529	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112796021-1	1.62286458405662	0	1.47937430969216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-5447726-1	1.90936350779743	0	1.37949912435154	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55747513-2	4.60489684094871	-0.801650350166109	0.939837731095543	-0.852966766115729	0.39367773436056	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83061857283676	1.19133112147929
Merged-chr2-128436392-1	1.44522629590972	0	1.43176184112962	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67167569-1	3.48335810241694	-0.899951355847713	0.762510598371564	-1.18024766838608	0.237901725088211	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91532545788922	1.93112180545279
Merged-chr18-36713103-1	6.97987785534481	1.70771622828259	0.685331821941419	2.49180933032548	0.0127094244046904	0.132902872003344	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70725856063263	3.3719626198815
Merged-chr4-94900915-1	5.78551109846425	1.10710530709471	0.592015162274106	1.8700624200941	0.0614751502971307	0.431653224162803	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56720524637093	3.14371900439321
Merged-chr2-72221453-1	3.28055297795667	-2.43021665954274	1.11986262701046	-2.17010247589952	0.0299990836752255	0.256619992386606	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.60694693384569	0.306240821987646
Merged-chr16-70700276-1	2.2518565766691	-3.04601513860687	1.26618046734464	-2.40567219062761	0.0161427425259934	0.1585307564027	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.06666018219308	0.805218875278971
Merged-chr14-73241495-1	1.83010459783086	0	1.46495381519622	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-120236597-1	2.34379222795669	0	1.37652576549836	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-45970384-1	2.39002144697723	0	1.35560217125894	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-84145578-2	3.52043201658683	0	1.31023151352039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-21621111-1	2.46764422406955	0	1.35697878383859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-16438684-1	1.76280548005636	0	1.40025590232828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-105978825-1	4.20853963417285	4.31717708122845	1.03241365826153	4.18163499357234	2.89420332331801e-05	0.00117761276690871	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.21043983090998
Merged-chr1-136139482-2	3.87823455880603	0	1.35697802202379	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-55841503-1	1.68385148661766	0	1.42351370114479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-130492227-1	6.73676151160921	-0.453630556800104	0.618805818095642	-0.733074162418414	0.463513197860851	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.30181207446064	2.93295256676719
Merged-chr1-59315205-1	3.88852763192665	-0.204369406288279	0.769397719200968	-0.265622578788666	0.790529894734697	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03516260464106	2.91790730682473
Merged-chr17-83025468-2	2.05920224955673	0	1.41470953817349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-131982796-2	3.61762072437121	0	1.33308086840651	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-70894440-1	1.99010243554579	0	1.42673902770867	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50106573-1	1.74520240881372	1.90555369268962	1.5381187123209	1.23888596987049	0.21538773020444	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	1.19380919831911
Merged-chr10-42958335-1	2.47300858062811	0	1.36889081592172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3839064-1	1.75350700319379	0	1.50522721226575	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107412207-1	3.1587105190268	-0.300681024633339	1.35836975481205	-0.221354328280773	0.824816551098078	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15580128306016	2.38099347700105
Merged-chr9-31221226-1	3.07821053529211	0	1.35333536101262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143567942-1	1.90056175330991	0	1.38813704600317	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43057918-1	4.46136279679508	2.06349265419617	0.720040148825081	2.86580221611706	0.00415954031958354	0.0566033572935248	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86659562451817	3.75201798978952
Merged-chr8-99839054-1	3.51931108423447	3.25033891398879	1.30028944210112	2.49970414951352	0.0124297060003242	0.130709940183004	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	3.37225955669785
Merged-chr15-81086903-1	3.58930686269225	0.385381538799907	0.862960488748918	0.446580745960475	0.655177800047628	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58628138082411	1.2679693671925
Merged-chr2-101896018-1	0.9457115400521	0	1.71380721961841	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118608140-1	4.75915349459218	1.73650218178932	0.803252127586422	2.16183950487264	0.0306305492795208	0.260851616948919	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7611859639178	3.004925761231
Merged-chr1-177179833-1	2.86836591017206	0	1.3171540626687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-41818936-1	2.546034860202	0	1.35405079959633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-85805160-1	2.19340066383969	-0.00932802220559397	1.18159000004775	-0.00789446610517781	0.9937011928053	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.921214647921698	0.892489746801999
Merged-chr4-99210012-1	5.1196529414896	2.14913573118935	0.824990282094377	2.60504369304013	0.00918625444462555	0.103891481990049	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14263512595936	3.43960369102427
Merged-chr1-138160501-1	2.2592743550541	0	1.39157174851595	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32382383-1	1.91727604856318	0	1.44111456455416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53028442-1	1.76426649360029	0	1.48447097679193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40708824-1	1.72607517215466	0	1.38993354260004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96953493-1	1.36801903163943	0	1.47808946171446	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-81915762-1	2.71801296365802	0	1.32741524106154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67891987-1	2.74688038396441	0.103146574829	1.35580186199438	0.0760779120610379	0.939357112825501	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr6-116181007-1	1.65445814843106	0	1.38001539661013	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67770911-1	4.53028892882663	-0.935914674601515	0.978719169312466	-0.956264783552752	0.338938477212248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68480936696374	0.73596151290311
Merged-chrX-7313752-1	2.08161880960842	0	1.44164127050525	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51466341-1	1.68435950356753	0	1.51970067235733	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30216887-1	2.20082450294708	0	1.35851705630038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-6357743-1	2.25011698355365	0	1.39089592774622	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100497098-1	1.11974924239873	0	1.63792319492801	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68127494-1	1.74108701208969	0	1.41993427497043	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-24521165-1	1.67968002617845	0.0986517616228234	1.40575863233792	0.0701768848175278	0.944052872200606	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr19-22572540-1	3.12448595758461	4.34170083359601	1.89752514632598	2.28808605883431	0.0221325099492252	0.202882489923176	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.72103481781833
Merged-chr5-122952373-1	1.88706509292606	0	1.4606921699352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69491454-1	3.51291215856467	-2.75401383682588	1.11853700683037	-2.46215710343818	0.0138104158320214	0.141096846929217	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95465003094022	0.890396206374751
Merged-chr3-65923359-1	2.44124751302859	-0.530525538035954	1.34677542796062	-0.393922792933126	0.693638041833128	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05552087422678	0.73596151290311
Merged-chr16-29438314-1	3.21698805143959	2.09361123500442	1.28520802877705	1.62900572368554	0.103311807284045	0.636888052715398	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.97234876436263	2.73893482823591
Merged-chr17-7396225-1	2.39772241562498	0	1.37129016205166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62542616-1	2.04562978588158	0	1.37106918885992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-117311172-1	1.22271967440871	0	1.60296260387827	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70148195-1	1.07603868857509	0	1.50440156291576	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3518051-1	1.89444005914054	4.14602465988906	1.25635371769432	3.3000456810029	0.000966690919275733	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.15258675016244
Merged-chr2-166270185-1	1.65563053451923	0	1.56152205539713	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-24479021-1	2.89502861919573	0	1.37750155142815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-54659139-1	1.79205601950604	0	1.60912788909115	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-10520588-2	2.70809973520543	0	1.41021234507816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34898048-1	1.58390252119167	0	1.55781484918011	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-25266475-1	2.50428625115036	0	1.4483363470987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-84444852-1	1.4359976182164	0	1.53491844136734	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13830235-1	3.74102509144602	-0.676571252138554	1.05627003940465	-0.640528678177685	0.521828950891618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84942384762748	1.72320011534497
Merged-chr13-6690224-1	2.06577442774974	0	1.35541274323368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165367180-1	5.30383854341152	0.799509468720974	0.705796720803941	1.13277583354353	0.25730840244411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71227660063199	2.54911206455162
Merged-chrX-37074723-1	1.84704888392886	0	1.46292289733331	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-3004062-2	5.6199804242698	1.62232049811366	0.670856688897654	2.4182817656323	0.015593996447667	0.154324593649742	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65509359865652	3.49247014348464
Merged-chr6-117277081-1	1.90179522365634	0	1.51759517573475	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-64899239-1	2.65581944862004	0	1.32864021645787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75601088-1	7.30077569054417	0.777048285395736	0.643502681551461	1.20752921110181	0.227228402448693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71316645406271	3.56574940097612
Merged-chr16-65467246-1	3.0317259510223	-1.95676800684889	1.2394636653184	-1.57872155642919	0.114399938141218	0.685329882451048	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00091006070385	0.61242769162773
Merged-chr7-110631291-1	1.58251171605413	0	1.39862236184959	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-34615307-1	2.38297616530802	0	1.35141897434608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131741596-1	3.85655587554403	2.43765613695136	1.27353109221995	1.91409236244258	0.055608355241915	0.400858641107355	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08589262939139	3.02488303352725
Merged-chr5-136936510-1	3.56400425072307	-1.02595683844094	0.785054536491719	-1.30686059471202	0.191260061193619	0.986119611705715	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6602574928204	1.69969229296561
Merged-chr6-49208488-2	2.30725952953108	0	1.40562684771275	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114840074-1	1.4138866888487	0	1.39804080809574	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33988393-1	4.26832763767989	1.90386962078464	1.14017560870372	1.66980384973256	0.094958178477693	0.596303779627458	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.760882982080442	3.40587561760828
Merged-chr19-45037056-1	2.07557159746423	0	1.36103962865078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43378170-1	1.81085812429939	0	1.39749905062257	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31665093-1	2.21205550378816	0	1.40348691335049	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-97977582-1	2.76269225845585	1.66564307668417	1.22086225922885	1.36431695229588	0.172467832755542	0.916341409809222	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.666688015277142
Merged-chrX-78523281-1	1.85742025047088	0	1.37805644579499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93819947-1	7.68277796348192	0.998042877277269	0.669966842846225	1.48968995694962	0.136305776511158	0.77526653946367	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77197592864198	3.81888951683988
Merged-chr2-14210885-1	1.40122869215038	0	1.63312841949594	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-69193270-1	1.42758771117777	0	1.45482787111774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41288941-1	4.81747529434498	-0.814332739080529	0.94906618412406	-0.858035775273267	0.390872709184692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.03072522110295	1.63900399389441
Merged-chr11-121679959-1	2.46653336267377	0	1.3339670834225	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-29849006-1	2.32285278359393	2.42040850934006	1.94062057127824	1.24723428431236	0.21231160533361	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	3.3916856522559
Merged-chr12-3725178-1	1.93619317310648	0	1.35728704479575	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45089259-1	2.42406435965811	0	1.36480243064293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117536497-1	4.46195954482106	-1.00175865162164	0.911137175512249	-1.09945975045792	0.271567580915794	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30557120047141	1.65199033198162
Merged-chr4-150965330-1	2.36834358077868	0	1.36729388313012	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68885339-1	4.2745922151599	0.425337445485992	0.850362239634336	0.500183834207986	0.616945640100537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12543639847293	2.75165205936934
Merged-chr9-21100592-1	1.59107016431432	0	1.44558433241144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-56301135-1	4.28600485569882	0	1.33490141985132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124617672-1	2.62907788971556	1.45347910645242	0.975338619955442	1.49023024077404	0.136163707530868	0.774660772445768	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.987850314215845	2.02938698498506
Merged-chr8-3309690-1	3.3406398523874	0	1.34437154811608	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-177398317-1	2.03735107927366	0	1.38937863636931	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-156956690-1	4.10651979700969	-2.14197525652114	1.06689569477595	-2.00767072827205	0.0446782931572157	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17499030955723	0.890396206374751
Merged-chr15-27706817-1	3.01201966950394	0	1.35504010692817	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35687376-1	4.14235577238848	-0.910426004723313	1.11056479155959	-0.81978648309639	0.412337837988303	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76856941490755	1.41083941945204
Merged-chr18-74870124-1	3.66950646171937	-2.91420826749187	1.23585099602658	-2.35805795104866	0.0183708248372511	0.175428893733014	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59451400209984	0
Merged-chr19-21280021-1	2.72843192197411	1.75412040037463	1.02488248212816	1.71153320596545	0.0869827267055125	0.557908643433296	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.672102196723515	1.72774128397143
Merged-chr2-117376960-1	3.29068295251071	0.544067696878998	1.00807087929499	0.539711748502746	0.589395836511137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37482376799783	1.46894927517136
Merged-chr9-37590505-1	1.30517591461227	0	1.50038346300175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56565338-1	2.19673875211965	0	1.39100362648669	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35541059-1	3.79449356044324	1.65644424095814	1.0362270040469	1.5985341382622	0.109924154141666	0.666274350852545	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892597230197813	2.15718255140544
Merged-chr3-89798725-1	2.07499001199174	0	1.47271533011139	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55177489-2	2.51012999686139	0	1.32496777617082	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55736584-2	2.34200203375821	0	1.34491159961907	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-24598453-1	5.44121988741131	0.324875142378845	0.736030803268749	0.441387970362189	0.658932149574676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15411801041933	2.44575596919856
Merged-chr9-118726722-3	4.87216963149092	-2.26208297318685	1.11635623260189	-2.02630926143944	0.0427331027810378	0.331367904868838	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37297535524846	0.382164212378408
Merged-chrX-71086144-1	2.75027616335455	0	1.37313768020542	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-35026966-2	2.02729410027608	1.83704898836819	1.40297456264004	1.30939579183198	0.190400316200924	0.983238427569588	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr2-155787121-2	6.87958460402167	0.292912261733793	0.611701435800367	0.478848412952536	0.632046472518055	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75710815771776	2.63489024549046
Merged-chr12-12256204-1	5.63003370190009	-0.992060579190776	0.81201030284462	-1.2217339801175	0.221808241873739	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34175410820388	1.56104072393284
Merged-chr7-35092662-1	2.10441331519198	0	1.35115152074713	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76613749-1	2.97374630738616	2.92301470364311	1.29476129279384	2.2575703489991	0.023972458981749	0.215771942785313	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.825079211029734
Merged-chr17-7400127-2	5.47289000867042	-0.56075813512192	0.81883557847073	-0.684823852145263	0.493455082039231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34909763974353	1.8789122704428
Merged-chr19-40727968-1	5.58713551361757	3.37089380417519	0.750844805397221	4.48946810305477	7.14012375992177e-06	0.000385602088608139	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15739180407335	4.27979026553152
Merged-chr13-120321029-1	1.64852154771043	0	1.37556192385202	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120531086-2	4.47490381012584	-1.34223479529831	0.793543569066451	-1.69144436124327	0.0907519657784261	0.576090728167576	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57989770002721	1.29606516661881
Merged-chr4-149339948-1	2.81292745305851	2.58334533250181	1.22917128904725	2.10169677368904	0.0355798463888828	0.290627810821741	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.20275690226768
Merged-chr1-62697108-1	3.39256658323976	0	1.33522948931662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56737526-1	1.7329759430784	0	1.51209876167997	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111455309-1	2.0276399657353	0	1.4467863742157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58567626-1	2.33131970080707	0	1.35805509947339	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136462043-1	6.19168434817111	0.933165237764591	0.716124132827378	1.30307749032322	0.192548307582408	0.991197550597136	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20996588711504	3.3137690657033
Merged-chr10-117571453-1	3.79780028513273	-0.168649450039316	0.816937244201804	-0.20644113270181	0.836446343490791	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20018097368416	1.98733255708278
Merged-chr18-40895256-1	2.52132525722812	3.69915956811886	1.94564427506928	1.90125174242714	0.0572690466619663	0.410205318773742	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.98465223817743
Merged-chr4-53092690-1	0.799812337538342	0	1.8454339623633	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-81783071-1	1.01380286375089	0	1.56049698061377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17214985-1	1.81751827137825	-0.498632168207298	2.27484796090513	-0.219193623827457	0.826499222169555	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.97234876436263	0.666688015277142
Merged-chr18-61092652-1	2.81464829963957	0	1.35007200655062	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149785476-1	1.62964578442896	0	1.47693244967767	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155272697-1	4.16392549511789	2.33559279259719	1.28383210329509	1.81923538646731	0.0688755262920027	0.469576248297271	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.792886178910224	2.17585887006086
Merged-chr11-115272446-1	3.49269856577011	0.391069397746867	1.08243208018817	0.3612877010065	0.717884386872975	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99776837722598	2.83977088234384
Merged-chr15-78859588-1	6.14882792519049	1.25949963793356	0.762260368321697	1.65232208084838	0.0984689103270307	0.613456899059028	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40246103854766	2.47679065818919
Merged-chr14-46183144-1	1.72059579466796	2.73828042809176	1.74802569370472	1.56649895819799	0.117231852283741	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.14490468848716
Merged-chr4-106300934-1	1.33499164842285	0	1.4484878058043	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17548962-1	1.55407402488991	0	1.51849454331002	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-52119381-1	2.63474953359227	0	1.36450821099884	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32775017-1	1.41661790297612	0	1.48450845102585	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-37158187-1	1.47478362409822	-3.46542442108112	2.30448394219215	-1.50377460117367	0.132639413070883	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20844314191735	0
Merged-chr7-96519402-1	2.46342704975999	0	1.3601463562562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-18070868-1	1.99771999981481	0	1.37664451475844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-33962237-1	2.25246896994769	0	1.37544506557219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126629296-1	2.6697402167933	-0.880321374987955	1.21282950700092	-0.725840994060911	0.467936252764616	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	0.382164212378408
Merged-chr2-48609950-1	1.52449468879078	0	1.69072346686859	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-116630420-1	4.82516515866544	5.86973327546769	1.22056564195718	4.80902712127435	1.51666630016902e-06	0.000112879357688889	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.75857160280443
Merged-chr1-153300504-1	1.71580908267356	0	2.20884000978742	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102713086-1	2.63661539337195	-2.01456300576521	1.51949501157372	-1.32581087165186	0.184902351029399	0.963219788772886	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52727618964721	0.609949614787909
Merged-chr11-85183125-1	1.37555154928682	0	1.52483974467798	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112354728-1	3.2246210174166	0.523798288030825	1.09317685669584	0.479152375777531	0.631830231553352	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51584491476919	3.29226631604904
Merged-chr2-45754418-2	1.7026405112005	0	1.45136495471252	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170705412-1	1.27051561336367	0	1.76154860003023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110928383-1	1.11842686126369	0	1.50487381144078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-61766921-1	3.86604639693494	1.02174737091678	1.0738253321886	0.95150239083513	0.341349405432448	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.666166562322424	1.79586598792836
Merged-chr8-34485133-1	1.53935463746416	-0.446136984442109	1.38607408646164	-0.321870951055009	0.747550460739867	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0
Merged-chr2-78988379-1	2.31514781764473	0	1.35223663727824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34839895-1	1.20380435348296	0	1.55334347357	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91794507-1	1.58548642107201	0	1.50046052221002	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119935666-1	1.3926821632847	0	1.40873685058014	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-43398880-1	3.88278118924654	1.05031866890501	1.25031516374813	0.84004313420979	0.400884202141543	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72562876716689	1.74723369056052
Merged-chr7-145114803-2	7.65333285433083	-0.100336991545547	0.536899337298554	-0.186882315873958	0.851752904811374	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.39877850648394	3.29492926749591
Merged-chr1-51669165-1	3.78995599189274	0.459190114098031	0.811796059957367	0.565647133249386	0.571633680235805	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83615275613791	1.79867782631271
Merged-chr2-165042389-1	2.40487613849309	-0.605941536089802	0.834674578098816	-0.72596141297365	0.467862426174121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7143252556671	1.9001726754443
Merged-chr1-43338738-1	1.64436864300672	0	1.58719992117542	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40682355-1	1.58354674550537	0	1.42158396889735	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-77266036-1	1.76366576637673	0	1.41637426032965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162509892-1	3.7240177259613	-2.49243308549102	1.16493723073667	-2.13954281804083	0.0323917320322847	0.271883666355979	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1642010737227	0.306240821987646
Merged-chr7-135647668-1	2.16578961934423	0	1.46473453175392	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-121224621-1	2.2607409336524	0	1.35781572653173	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-147008369-2	6.80602644205715	0.0521324304762828	0.580884406922405	0.0897466515799359	0.92848854289292	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.64076340158438	3.5465999697838
Merged-chr18-46143613-1	2.92795545156063	-3.15689783071109	1.18204637805373	-2.67070555717873	0.00756920105837939	0.0890880785952557	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75606925927282	0
Merged-chr13-83341590-1	1.98868467463225	0	1.41798780414639	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56490134-1	3.35824536500926	-2.90855592180021	1.08381864777196	-2.68361863654904	0.00728301303188804	0.0866088752651057	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.77407997482338	0.469435083901436
Merged-chr7-129398982-1	2.10799192915626	0	1.4365953385531	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-15027060-1	2.08536723009368	1.50574487766279	1.09785620000165	1.37153197081779	0.170209184245201	0.906712712668678	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.31734301959449
Merged-chr7-68302796-1	2.83853308117464	0	1.35945640456856	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125759238-1	2.0903388556424	0	1.34982488140984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114372085-1	3.26501823747356	-3.59916312486815	1.22364487069098	-2.94134614631754	0.00326789134465705	0.0472976125646019	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29235055096768	0
Merged-chr13-82937358-1	1.38260805017249	0	1.72450742484143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-58062806-1	2.45478677231271	0.116351593619746	1.25541191474506	0.0926800138290652	0.92615777531431	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12751608310997	0.989878296978726
Merged-chr13-44414787-1	3.70759343517168	-0.0834222583665033	0.855130793707449	-0.0975549693454766	0.92228568312999	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07051771867692	2.47926873502901
Merged-chr5-64752094-1	1.45271118279227	0	1.53801741336005	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33897320-1	2.7051395814411	-3.27607879683159	1.24545168013117	-2.63043428267452	0.00852758550524713	0.0979614179001569	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80013236766663	0
Merged-chr14-120216757-1	1.39555012218691	0	1.45981051052112	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150595249-1	1.56394998500317	0	1.4750325016271	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68240737-1	4.11138384322775	0	1.30831223279746	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3496271-1	2.727387742668	0	1.34779748546411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132939618-1	2.34035419687903	3.44986454112702	1.18417089957731	2.91331643292236	0.00357612021486662	0.0504610562644514	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.65199033198162
Merged-chrX-36096206-1	1.65097841119236	0	1.40960010522414	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42860482-2	3.01013661063156	0	1.34238270235846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148683687-1	2.30706023394044	0	1.4355397939946	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-153959610-1	1.87518642541599	0	1.41498645389525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157472888-1	1.93291228471632	-1.32937502405856	1.31934688030077	-1.00760083940585	0.313646125809055	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.94366122608546	1.15692263537643
Merged-chr2-180347248-2	7.19189490441059	0.714420262210345	0.76016210600926	0.939826198336757	0.347306718234687	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20317073363165	3.19090291045955
Merged-chr12-77100033-1	0.724125434033057	0	1.69741545618001	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65505310-1	1.30569966038356	0	1.51288039953803	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-29101062-1	2.66051872126862	0	1.34846263925871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-91278687-1	3.0171424765482	-2.58379186307217	1.16705638405935	-2.21393918782658	0.0268329625167274	0.234949319123418	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87235681122577	0.306240821987646
Merged-chr3-139878644-1	2.36782992639414	2.73974548920435	1.52750238728109	1.79361126504099	0.0728752372390686	0.490382581878713	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	1.58492111464609
Merged-chr2-79228787-1	1.614484410161	0	1.3921913807379	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-77128497-1	2.61192015360972	-3.34199663593978	1.14674622512256	-2.91432974683009	0.0035645317777137	0.0503627877938334	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02971585565112	0
Merged-chr10-26862388-1	2.11475835526219	0	1.37623963284942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-44297651-1	4.30408645491829	2.26794073734354	0.77005077592588	2.94518336744308	0.00322763315904611	0.0468509184199184	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.1954665114589	2.8879781797114
Merged-chr6-31124962-1	1.85933319171716	0	1.39158307595086	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124898902-1	1.33954492986127	0	1.53357339881822	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-101679558-1	4.08464285463101	0	1.39618890264371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81976134-1	1.89687872620659	0	1.42598907059027	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-89383217-1	3.5007021013783	0	1.36546031547987	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120661107-2	2.83868790867923	0	1.36423939744964	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-126931906-1	5.3712888433018	0.860563684371258	0.800195110311791	1.07544231810657	0.282176744037203	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78487807181739	2.51324457365836
Merged-chr1-128725607-1	6.53200297371691	1.17966318888781	0.714870234535071	1.65017807694152	0.098906519367873	0.615654926139553	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98880444948182	2.66828971316851
Merged-chr10-66774509-1	2.01186948402489	0	1.45226505289162	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54569184-1	1.99087060409185	0	1.3514610888921	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62233322-1	2.37746050753829	0	1.41169160962571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-26428519-1	1.29240554442095	0	1.39698972175171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-46525858-2	2.58206210957311	0	1.42018387517903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-7553764-2	2.53231547862806	0	1.45037480634533	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123168984-2	6.55332083243324	0.563152892519226	0.68037237917479	0.827712749306878	0.407833197108284	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.26227159890545	1.66258977942235
Merged-chr3-135607893-2	3.97794814223225	0	1.31958993786434	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64835350-2	4.52246889404117	-2.62375644553083	1.1210179550425	-2.34051241885002	0.0192572979479525	0.182005697383122	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95943941063013	0.306240821987646
Merged-chr18-61419793-2	3.41998710255212	0	1.32028908143168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119127965-2	4.65267074664406	0.561189398062908	0.986132016621865	0.569081409591934	0.569300893824844	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08422468422055	1.46894927517136
Merged-chr8-111313029-1	1.68960072721452	0	1.39976238455082	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102993062-1	3.12249804966485	0	1.37118021633282	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23661482-2	4.66292780529437	0.734849198457446	0.837235215327617	0.877709376056158	0.380101454972517	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.61682545175708	2.82986663084093
Merged-chr8-37033127-1	3.93294966705562	-1.16573435710817	0.983237191353307	-1.18560848527675	0.235776949743866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.20711153153543	2.27416815045033
Merged-chr18-81566725-2	3.00037767700473	0	1.33060189802048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39185855-2	7.56884151490224	1.64584582969877	0.835707557955415	1.96940402660158	0.0489067137359522	0.364990648217169	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10658790029851	2.31711242604998
Merged-chr19-40690749-1	4.41588771289869	-3.58094695592206	1.11400781569323	-3.21447202207795	0.00130684649628225	0.0233580938583316	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18454010892956	0
Merged-chr11-83517336-1	1.37700148874818	0	1.67477972139014	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39240625-1	2.08450518276857	0	1.3492764796804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81703289-1	2.34325954099677	0	1.37131402708461	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-101980393-1	1.52765197635228	0	1.54349953489358	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36403386-1	1.82834502077457	0	1.3635735360457	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72950450-2	3.67721745786019	0	1.35595844082641	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-72491370-1	1.60439305166469	0	1.418019272023	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32410006-2	3.58307442132889	-2.18942580573088	1.13676913036252	-1.92600744271852	0.0541034445235486	0.392391086108303	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62163789677648	0.73596151290311
Merged-chr5-140623491-1	1.43483119339468	0	1.48986952451247	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8339352-1	1.5931983076864	0	1.75257735671089	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-70145171-1	1.9960944429081	0	1.40086669715962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88221320-1	2.74777810525902	0	1.37597227194991	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-139378428-1	1.84042056316998	0.743949442434806	2.00880168452219	0.370344891766536	0.7111255291038	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641446327055861	0.733321818366247
Merged-chr4-102665194-1	1.14165894135891	0	1.50558235217352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25151392-1	1.91894237535181	0	1.35519467339896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44923762-1	2.59157189191172	0	1.34572315990885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139086227-1	7.2387405722601	0.910759208569217	0.640770727123606	1.42134958732834	0.155215154403507	0.849898565414077	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90020999762549	3.35822082392563
Merged-chr3-87581187-1	2.51843820203022	-2.38015098306248	1.42567843780966	-1.66948655456922	0.0950209928282634	0.596640895296983	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05492522478848	0
Merged-chr13-119617388-1	1.90949049933218	0	1.59664715101608	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106150518-1	1.42971864970356	0	1.42586267130005	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117657543-1	2.58366839333795	0	1.37783331166506	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-16551151-1	2.80618098382602	0	1.37236403467526	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91251730-1	1.60220360800304	0	1.4648544525064	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-83973898-1	1.54463276662772	0	1.37674724130759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72280399-1	1.60865954043511	0	1.43901963905454	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-148523753-2	3.39861480941331	-0.671723570867655	1.28349804421553	-0.523353793872129	0.600728072485026	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.869935478824964	0.469435083901436
Merged-chr6-71487107-1	1.71925956793463	0	1.37126137044201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-124454888-1	2.58313006656464	0	1.35240763180237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-151298446-1	1.40895757263697	0	1.48859456853465	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133459435-1	3.92937223808828	1.24237551310332	0.694780104269741	1.78815643319139	0.0737507729816155	0.494999795733016	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30464942005742	3.48415374011609
Merged-chr18-76245185-1	1.580941577437	0	1.43491133092262	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-75297046-1	2.01998068575526	0	1.4231604337728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49456336-1	2.43611080170716	0	1.36758970014701	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-74812017-1	3.32212059383103	-0.692337773781143	0.737513043594379	-0.938746480207229	0.34786092316183	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.17204590130716	2.11480110409737
Merged-chr5-137107242-1	2.67137599569621	0	1.35490953326624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20553272-1	1.50854564957326	0	1.47730742418925	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-17249635-1	2.84311313408459	-4.07444619089989	1.17188778651381	-3.47682281340329	0.000507393012128688	0.0111001351759495	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.76723425117938	0
Merged-chr5-116031342-1	5.21184753139235	1.49870073369509	0.817866438319407	1.83245168584578	0.0668841536084508	0.459822398916131	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02252335407448	3.0500197815571
Merged-chr13-108390798-1	4.03344453924251	-3.58979420209114	1.14119088007629	-3.14565623049069	0.00165714661505799	0.0280118414923849	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30534790891138	0
Merged-chr7-66113928-1	1.49205485798401	0	1.57070939044632	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-84742430-1	1.17670260061574	0	1.44159017727283	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-56681329-1	2.62793247098075	-2.98832062041307	1.28350914340208	-2.32824256513842	0.0198992271591411	0.186588448549467	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64562289944091	0
Merged-chr8-112808882-1	3.22773121741923	0.458968311823626	1.61545744635355	0.284110431295866	0.776325753205122	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03487100908953	1.86961804807321
Merged-chr6-38712987-1	1.44051390639741	0	1.41462587646254	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16225723-1	2.63253534707746	-0.823931534212131	1.33577568717108	-0.616818783367036	0.537354261201614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81000947116238	1.354969417986
Merged-chr7-99249761-1	5.52931469961481	1.24960703345538	0.757828872344395	1.64893035757484	0.0991619030010256	0.616774577717972	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24542426820123	2.75703864874546
Merged-chr19-46527094-1	2.81400640191015	-0.832017603680043	1.22825888665113	-0.677395956766536	0.498154762985503	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29386394654585	1.90763661962622
Merged-chr17-27700062-1	4.04801386434039	0.368884164217368	0.722056637795448	0.510879818712877	0.60943521344303	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59712182722313	2.1359713465465
Merged-chr17-64559234-1	2.24177883773139	0	1.3795663226005	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88322639-1	3.46598428434708	3.01036296407358	1.19937127166798	2.50995086774676	0.0120747960637629	0.127966205576168	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.906093788277747	3.03361807480644
Merged-chr9-100357624-1	2.50617464866295	-2.0546214959075	1.06812846208044	-1.92357152613051	0.0544083129891546	0.393859047367819	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.02085170011236	0.773587911294612
Merged-chr4-6469051-1	2.50442194970107	0	1.34144918908153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35384404-1	4.5160571435144	-1.50868506551185	1.06468342640391	-1.41702690968676	0.15647506004345	0.85429186010521	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45159865713983	0.469435083901436
Merged-chr8-14376152-1	5.33791546379917	2.13659341143457	0.702749200075494	3.04033560081611	0.00236314665014526	0.0368901531295728	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10014649337619	4.26966215745558
Merged-chr10-59268980-2	2.94578554288475	0	1.35626799616149	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95390726-1	2.14595160021059	-3.45225526108926	1.28775573475454	-2.68083081901189	0.00734396342051452	0.0871433872665593	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0224054808096	0
Merged-chr1-118514742-1	4.38743974638926	5.76946300476921	1.04403037726186	5.52614476592199	3.27344058761213e-08	4.87257969562875e-06	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.78031746813851
Merged-chr8-46422896-1	0.571422945638317	0	2.31322024361307	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-84947588-1	1.14350789591812	0	1.88313154161808	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-32899068-1	1.76302593888191	-1.8433192827043	1.54628330616907	-1.19209673631615	0.233223316577496	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917180550409531	0
Merged-chr17-5479141-1	1.75385480274884	0	1.44210701018779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39150629-1	5.09645450295484	-0.530803030321196	0.788790811313803	-0.672932573133167	0.500990188286505	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64350661599647	2.21043983090998
Merged-chr7-113312005-1	1.18278892938871	0	1.48945648978954	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94153751-1	2.65781483216396	-0.379081684588766	0.940665100479013	-0.402993248495907	0.686953191266731	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32656577629132	1.88086620139027
Merged-chr18-44389641-1	1.34837607991349	-2.08887139265297	1.28227029119762	-1.62904140179525	0.103304254720176	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31551896680372	0.306240821987646
Merged-chr4-154937919-1	3.65681016144741	-1.88809938217323	0.95049160749371	-1.98644508514056	0.0469839247101525	0.354532007679534	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15433638424319	0.683637474991079
Merged-chr11-17898927-1	0.954903638392649	0	1.79533268158843	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22010385-1	2.26661744825788	0	1.40366025439299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103607287-1	1.31806699475529	0	1.54220037644723	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163532169-1	3.35735775071653	0	1.34327654771638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-14200418-1	2.98350264640372	0	1.33964304624084	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-14337294-1	2.4450184297784	-0.118011685715951	1.79050071143182	-0.0659098792658846	0.947449575171082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7015680181857	1.2679693671925
Merged-chr18-77799436-1	2.33497509924026	0	1.38456418007559	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-120002589-1	2.59688909119933	0.758302678388121	1.38307191538406	0.548274222007863	0.583503624847703	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.382164212378408
Merged-chr18-76978153-1	2.48381179431395	0	1.39456334802537	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-93070621-1	2.88587192796192	0	1.33907153874806	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-54527542-1	9.35009607404764	1.09003803529108	0.495534947215885	2.19971980062224	0.0278267810730547	0.2418449832658	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.78366534574345	4.89170149815698
Merged-chr2-14244340-1	2.50997330644594	0	1.33618631451661	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-153515664-1	0.583926620545181	0	2.23381155523319	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-110737032-1	1.34758081388412	-2.74024522783194	2.19286309972346	-1.24961983635801	0.211438453415169	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39907129323377	0
Merged-chr19-10173106-1	1.90209885989966	1.84094967508781	1.3598627554883	1.35377608340098	0.175807826143489	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447575739718858	1.72320011534497
Merged-chr4-133200024-1	2.12705347725052	0	1.38203233200211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80103776-1	1.93547834207341	0	1.35466774736883	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108055255-2	2.49779905480034	-0.437137172681135	1.34118175765515	-0.325934326340228	0.744474043915095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0
Merged-chr18-82848170-2	2.66730254737434	0	1.36388129838482	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-91886043-1	1.53970856729632	0	1.45167240127555	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142355729-1	5.60503013727888	0.0218957459905221	0.747110288917531	0.0293072472904185	0.976619546884561	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73998732318363	3.90167802036664
Merged-chr16-90694896-2	2.82022753236266	0	1.38838860524048	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-55436785-1	1.71492220186699	0	1.39433139859662	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-20742531-2	2.37088582529107	0	1.41081784549918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73301494-1	2.42022945576431	0	1.32701436164508	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116072397-2	2.73627815304657	0	1.35533423284893	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-20917747-1	2.43033960496871	0.851138441751794	1.06260780585766	0.800990202650373	0.423137317748184	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.07093521121123	1.46928333126936
Merged-chr9-70843620-1	3.59849746893004	0	1.33090390227435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67360025-1	2.528564627535	0	1.35128939533881	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87466422-2	2.65391730990794	0	1.33803896996725	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-3880042-2	2.31910224147456	0	1.33924397969789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-49090381-1	2.58207497704632	-1.52735073797779	1.21867614967858	-1.2532868050143	0.210101348722572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.716345901999145	0
Merged-chr7-80741200-1	1.94526276440465	0	1.35156785108215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8387441-1	1.97017351067528	0	1.46488486556133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-34217262-1	2.90175682159383	-0.491300435001787	0.950339771835975	-0.516973454717819	0.605174689416834	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0277807302721	1.31734301959449
Merged-chr17-43675372-1	1.3706593425632	0	1.51235009338299	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-82783574-1	2.90345119894985	0.490503728506935	1.19396270083457	0.41081997633936	0.681204544140884	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55116305608499	1.75238521850622
Merged-chr5-147848414-1	2.16125545228343	0	1.34005411792368	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-103315159-1	1.64590992306593	0	1.38795213999359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-76049796-1	2.42496690899691	0	1.33638668305219	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-123346176-1	2.15597699955918	0	1.3645878352771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-95494047-3	2.87227780597073	0	1.34640370740365	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-99953110-1	2.59865140203943	0	1.37728115010171	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152609721-1	1.43890076670986	0	1.42901685286355	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58402293-1	4.91237148927506	0.155018387637174	0.629904839273077	0.246098105574277	0.805606289523872	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6789000348388	3.1143152953673
Merged-chr2-35733901-1	1.77813438638552	0	1.54731261871522	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77921956-1	1.28841405822964	0	1.62453411316842	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125560084-1	4.4270056750989	-2.30925377546092	1.21906351509889	-1.89428503671821	0.0581871860625388	0.414826517613208	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.95016201543431	0.989878296978726
Merged-chrX-9654653-1	0.764059174909515	0	2.01075366097345	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142356437-1	2.75322643676685	1.2864651230723	0.948168560717021	1.35678947433087	0.174848112898168	0.924777400683421	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78069407013016	3.5355383688018
Merged-chr3-44715690-2	2.11304970864569	0	1.42005647504785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-80048434-1	1.90135408808539	0	1.4075549397352	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18202050-1	1.9153061359802	0	1.36413050654018	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121619366-1	2.16176156225078	0	1.4229425942202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16204341-1	2.41322408417339	-2.76290050364282	1.20081916139879	-2.30084644920591	0.0214003119015825	0.197517624508589	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40557079078327	0
Merged-chr1-72230850-1	2.01015641958635	0	1.35650139832387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46926464-1	1.85690000393477	0	1.52754779796152	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152582967-1	2.61653349503664	0	1.34884384613624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84138022-1	2.96584065568807	-1.07820494782528	0.7806403339095	-1.38118016836967	0.167223570854404	0.894954255614403	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34740176858143	2.3532311534736
Merged-chr19-12831668-1	2.95034369572637	0.850735167221489	1.10056871141168	0.772995959634604	0.439524771805322	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14953280217139	1.48233004913473
Merged-chr14-27357339-1	2.01507639323732	0	1.41494093136785	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13661606-1	1.46291070238866	0	1.44646666560069	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-137899087-1	1.58963776747501	0	1.45047279889237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93767136-2	2.61209678951514	0	1.36496247869724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4959350-1	2.29324779640123	0	1.4387900874037	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5287896-1	3.06674692772374	0	1.3509323238292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10918818-1	2.30656710651998	-1.27494466479678	1.32280760336771	-0.963817157953219	0.335137602862139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30026633713165	0.469435083901436
Merged-chr2-178870142-1	1.74850436213432	0	1.43581361516555	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106206787-1	1.50212840155388	0	1.57070277934885	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-21575725-1	1.24576798876049	0	1.89271658304327	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-83096113-1	2.51731072230537	0	1.3372895753148	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76358964-1	1.46437368341339	0	1.48717864605633	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57500000-1	1.28917690449569	0	1.61997208398774	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191448205-1	3.29817796850549	-1.20190021152667	1.12972209422576	-1.06389015287018	0.287378464385897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25273807019569	1.775524153257
Merged-chr17-31052455-1	3.16262714214557	0	1.37332190361834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30699883-1	2.80749796346978	0	1.38130218315092	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-125201845-1	1.06702007207531	0	1.58924388538632	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134064271-1	5.39966257341757	0.0159459486379852	0.854608681046964	0.0186587721276715	0.985113317599998	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56073163988982	2.11086637835816
Merged-chr11-6497402-1	3.33521866670284	1.98765229441017	1.36682878048797	1.45420722974575	0.145888861188996	0.812467598335329	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.733321818366247
Merged-chr19-40371925-1	3.11091578171478	-2.32646828567773	1.15879090376991	-2.00766875034055	0.044678503480677	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22474085140723	0
Merged-chr1-135369054-1	1.52573303806071	0	1.42292274862514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55878142-1	1.59904199335941	0	1.56794369429214	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99173952-1	1.10209681968254	0	1.56653523807517	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82195125-1	2.67367685771229	0	1.35786962593302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111748777-1	3.55677811505001	1.73782193726466	1.2059245508295	1.44107020299844	0.149564850556018	0.827629034479219	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.902931216988277	2.35476842211225
Merged-chr13-31963980-1	2.85996534856598	-2.01710120465424	1.02257728366818	-1.97256602202087	0.0485450273731463	0.363203956803941	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.59972505013966	1.0023426291647
Merged-chr17-17841120-1	1.36484193311335	0	1.72378473315784	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53499712-1	1.85898628688386	0	1.36858219688331	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-50036498-1	3.19959844101172	2.16851759460474	1.26841797123375	1.70962383361337	0.0873354554595176	0.559347512737198	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.08582593428369	2.6263180312234
Merged-chr7-97313326-1	1.89829315794066	0	1.47427771103189	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117238338-1	2.29161264103155	0	1.39568795008578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41539767-1	1.51778381304586	0	1.40312272999576	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-32572698-1	1.8939211784152	0	1.36570187898332	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28446577-1	1.8610004218465	0	1.37442554204771	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-87793722-1	1.34943707743768	0	1.41755245636458	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31111039-1	2.12869871031205	0	1.38340504662543	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-83586582-1	2.08336035500351	0	1.34749913826632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126806420-1	3.03753850236949	0	1.33917444959948	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-9433288-1	1.60399170494814	-0.531242157030211	1.50910662505361	-0.352024269333083	0.724820061668458	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	0.423054662900563
Merged-chr18-24972677-1	0.975569374367022	0	1.66390262858966	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102286878-1	1.65557617531792	0	1.39668686106546	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-61052394-1	2.00392592227552	0	1.38384031352401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-43322089-1	1.42596367096985	0	1.57000597961154	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39451217-1	1.93551282024932	0	1.3554958774106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19876135-2	2.40407087340133	0	1.35459905941808	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-31082628-1	1.25489089726297	0	1.47803694331528	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68050299-1	1.95301430082573	1.44508397671704	1.27891726810057	1.12992764486108	0.258506714091156	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.599529422091775	0.825079211029734
Merged-chr16-93081741-2	3.26085267530216	0.302458278405081	1.06097344913038	0.285076199270574	0.775585764037578	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.928670148753437	0.989878296978726
Merged-chrX-47846245-1	1.55580739852529	0	1.43072741283132	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181127297-1	2.15039413034457	0	1.44960401700724	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-184664221-1	2.04371112834968	0	1.38126243227805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-88725476-1	2.41891547847645	0	1.54772440856159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134365627-1	2.27744825683863	0.297332280990563	0.989031445351485	0.300629754886	0.763696839347007	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85334107252417	2.22563229031312
Merged-chr13-102866240-1	3.0030175041604	0	1.40148078600394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-100023100-1	1.63133051794526	0	1.46683055852392	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117771133-1	4.19578633113862	1.64387383012012	0.822404531930821	1.99886280570545	0.0456232000573348	0.346895549502004	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0512362282328	3.72248972571407
Merged-chr2-10359943-1	1.49208959901591	0	1.41686313946059	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-6054499-1	2.76310738873674	3.4949198525922	1.21260178147981	2.88216618676508	0.00394951368876769	0.054563408352265	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr7-102292372-1	4.6004167236132	-1.33948942844137	0.852940800381086	-1.57043657407747	0.116313579279796	0.694126528836844	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.63515297859343	1.41695929335733
Merged-chr10-34201493-1	2.01580301899025	0	1.37565745990735	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78848596-2	2.75595780776971	0	1.49011479647741	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93464410-2	2.63142244860824	1.44483830093098	0.9701301882788	1.4893241323563	0.13640203594684	0.775606363148753	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79999549895995	2.82036772805142
Merged-chr6-86871979-1	2.00234999181642	0	1.40643569970519	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-128441916-1	1.54343613246661	1.26487216118939	1.45186566185871	0.871204681272003	0.383642404345567	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.420961122473315
Merged-chr15-84212374-1	4.83726727516174	3.80948115493288	1.00707896805972	3.78270351755271	0.000155134157947325	0.00448251393305376	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.95343506933758
Merged-chr2-114157564-1	4.96164382107342	0.617142439060249	0.872542165470151	0.707292396267996	0.479384789821729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68945314642956	2.04403056204475
Merged-chr14-47518813-1	2.01631130672945	0	1.34189006361355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-34231905-1	1.62777779006389	0	1.60560588715003	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83667373-1	3.09035051087411	0	1.40391228917915	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93958673-1	1.43029584063946	-1.16140731524714	1.44059847650028	-0.806197795008508	0.420128809915478	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06023244314539	0.733321818366247
Merged-chr10-94144670-1	2.11366805081033	-0.709973308814449	1.3627583922691	-0.520982525473417	0.602378944570231	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95971446184795	1.88906532169278
Merged-chr16-38701532-1	2.88844551580119	0	1.37580453792511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5818731-1	1.16879340397307	0	1.65824595558525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46763693-1	1.70802617495017	0	1.42981197666405	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26325954-1	2.41317215300433	0	1.41508718124841	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46321890-1	4.72416679676514	-0.193948904954822	0.865983586857087	-0.223963719287937	0.822785533960019	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12865855118093	1.93871841517079
Merged-chr14-50981386-1	3.193655545788	0.233134261406441	0.965063461479567	0.241574021514622	0.809110253776753	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4354260539347	1.26501898168246
Merged-chr12-51673405-2	2.45830712266695	0	1.47481489478152	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34722882-1	5.09949414543087	1.14143344824569	0.764970809731114	1.49212680238989	0.135665906734866	0.77256857006506	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.88384367715768	3.33178800780166
Merged-chr12-105906816-1	2.88957396072272	0.267278485254984	1.04691051224706	0.255302131489065	0.798489753791992	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22587560852316	2.57230422574174
Merged-chr6-88384829-1	1.36264566223396	0	1.5085013674414	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125443238-1	1.97685766872344	3.07210507826663	2.07112114067219	1.48330535473631	0.137993300313714	0.781666973153601	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.00259395741298
Merged-chr10-21623907-1	1.84335334048611	0	1.39791266679911	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-51016647-2	1.91694096215705	0	1.43909364024908	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31188935-1	1.54583992910288	0	2.17514422305508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-18059882-1	2.37840036275715	2.51670599632099	1.42109518653254	1.7709622973685	0.0765669715670524	0.508832027257257	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr19-41380739-1	5.02472530074577	0.669006670755368	0.803020566007614	0.833112748383863	0.404781144391553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.35912003456113	2.48366051229539
Merged-chr11-65795890-1	2.46767870225662	-4.10350458593772	1.18794246603279	-3.45429572834585	0.00055173200759698	0.0118612744143317	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.96493519635646	0
Merged-chr17-27781258-1	1.43535165518265	0	1.74379849674658	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146332085-1	5.1615702556581	-0.413377830959259	0.841028284404151	-0.491514778545323	0.623062402172656	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.46336017958566	2.48516551763465
Merged-chr8-117538866-1	2.08563872853335	0	1.38176027753412	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-44574325-1	1.72314664742664	0	1.67518697605371	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31735566-1	2.24288754176233	0	1.38263763983568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53595363-1	2.43455647900043	-0.156537670203938	1.94674965490007	-0.080409758804849	0.935911365635157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.982874146088839	0.773587911294612
Merged-chr5-142478970-1	1.58804395305534	0	1.49306455642603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73953045-1	2.0232417541174	0	1.51810152012522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-152292556-1	1.20919148263551	0	1.47160538534098	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4891999-1	1.8976165441554	0	1.38167903467079	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-79144397-1	1.90981992349778	1.85897541354045	1.36307062201525	1.36381445210229	0.172625970596154	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr11-58982084-1	2.94472228827265	0	1.34644500298078	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111797738-1	4.91304622683295	0.464737096126453	0.856694036908264	0.542477332751901	0.587489718563956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43771903009755	1.64109723835872
Merged-chr1-166940359-1	0.92594347164287	0	2.38009440384258	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35021369-1	1.35832213789028	0	1.61057884940448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-88223294-1	1.56129826529919	0	1.42773795794488	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53408602-1	1.55967568074863	0	1.51404686714924	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17431193-1	3.30500241849069	-1.00232217988189	1.00962618075991	-0.992765638394485	0.320824178967429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85796354725385	0.73596151290311
Merged-chr2-35464723-2	3.16972212777139	0	1.34766680865453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-53570901-1	1.44019579924042	0	1.53210084325012	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-9494962-1	2.23500498484322	0	1.35907684834467	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-35751550-1	2.64546286154559	0	1.33504729132868	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-12709232-1	1.56933040195694	0	1.47522791675684	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49642317-1	1.51313115708906	0	1.63352122647133	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135616900-1	5.07203947431557	0.917722004007144	0.683280212476737	1.34311222138368	0.179235638813605	0.941278795621141	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.84474321817128	2.47341853569617
Merged-chr18-75174516-1	2.42715227887659	0	1.43417990880996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-91240477-1	1.14465512144326	0	1.92564236532896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72325952-1	4.0179545062717	1.82284774703638	0.907886532195238	2.00779247449436	0.0446653488733438	0.342028917012284	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.97234876436263	2.89117471195386
Merged-chr9-25519912-1	2.426591418606	0	1.3732265681571	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38349163-1	1.84509100160044	0	1.42378825405151	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78806034-1	0.948089061810839	0	1.59317661447242	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-55774622-1	4.90833999528393	0.924877856264964	0.841471854096197	1.09911918237402	0.271716083898143	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961036207701452	1.40918939303534
Merged-chr19-45154625-1	4.09397358710378	0.334460862881324	0.868601608356196	0.385056693038229	0.700195412714954	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.48776634911801	1.69181239031707
Merged-chr5-53572748-1	1.668006705711	0	1.48928906144901	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5527488-1	2.5830807670732	0	1.38013841787349	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53079584-1	1.68475384036732	0	1.39946094086156	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-26354373-1	3.3629194715551	4.75682798317977	1.25757399090004	3.78254322815259	0.000155234123442914	0.00448251393305376	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.27254432176078
Merged-chr2-157514339-1	1.79925347776491	0	1.43933361480084	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61464313-1	2.61623096421559	-1.31936389131316	1.14648804504389	-1.15078730826421	0.249819747409009	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.07260532310884	0.733321818366247
Merged-chr6-121054083-1	4.96654990621772	-0.0193165055576714	0.732336911743807	-0.026376528682237	0.978957015033845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48383377434761	2.30810693946836
Merged-chr4-149856540-1	2.30309411540204	0	1.35675228872689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-156183950-1	2.44881843300166	0	1.35348972422312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-149958831-1	3.99481779544091	-0.782537253230685	0.919810781125283	-0.85075894878438	0.39490326977597	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13581295554506	1.26648457881507
Merged-chr15-51083393-1	3.30268573967604	0.113306808813132	1.37912375307959	0.0821585507175244	0.934520633703916	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0
Merged-chr7-102333861-1	3.76905121463437	-0.509893039039612	0.991702805413848	-0.514159117283961	0.607140748298893	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96550735294185	1.20440436174322
Merged-chr14-76332368-1	2.04390241254877	0	1.42786324262624	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-13866508-1	2.20290530454698	0	1.37157436471203	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-104042825-1	2.87711032642921	0.146011106544614	1.76632030883873	0.0826640025673541	0.93411870866178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36037656945513	1.64143129445672
Merged-chr10-59259525-1	1.83906168191239	0	1.46166968018776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25011653-1	2.37332937521272	0	1.40023651714239	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128858438-1	1.9593866016499	0	1.35754937594443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-75189612-1	2.72695849380829	0	1.35903543847853	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69293028-1	2.32713729003807	2.11761175794861	1.18619254608689	1.78521755589712	0.0742260354149786	0.497355922640979	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.656505258713436	1.71218713769806
Merged-chr10-87639442-1	1.12706936315873	0	1.62630839566202	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-103472185-1	3.40455216842373	0.818767636515989	1.30481736222458	0.627495970102722	0.530334176948846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15942163441885	2.22933943739997
Merged-chr17-37250727-1	4.1037603577502	-2.73372790234842	1.05089350008919	-2.60133676925054	0.00928612450146839	0.104767108368949	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.29948534229881	0.423054662900563
Merged-chr4-140565458-1	5.47322841820421	3.18823838450789	0.851016633130477	3.7463878617506	0.000179399143569463	0.00502271483962729	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04463589554984	4.18460203800064
Merged-chr6-42612493-1	1.00512016643509	0	1.75221885993788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-90137834-1	2.47702095701677	0.968011037937085	1.12202950964692	0.862732245109752	0.388284699253507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.29072512625674
Merged-chr1-134782879-1	0.986511490387024	0	1.73115273768582	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107514743-1	4.779616822603	-0.56703487897618	0.662845451785753	-0.855455638186168	0.392298953309179	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.01595188777757	2.60998193236576
Merged-chr4-152491482-1	2.92901676556878	0	1.35974506151423	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-183508043-1	3.53642640175686	0.300560075004619	0.80245146680983	0.374552340466775	0.707993423545272	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0536260045177	2.05066483796074
Merged-chrX-18188363-1	1.84690846032637	0	1.39720251223705	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101998676-1	7.7238084649482	0.936624714082266	0.562256508887838	1.66583169652396	0.0957469410498045	0.600161113653767	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54812650378379	3.60746428566538
Merged-chr16-57383800-2	2.90777886997806	0	1.35905129054159	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64861094-1	2.64387931472468	0	1.36459384464113	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91091942-1	2.39459544976555	0	1.37474386851574	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103345510-1	2.16001508533414	-1.2468395211167	1.2701594716246	-0.981640139660516	0.326277165254553	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	0
Merged-chr19-46505813-1	2.31825686856515	0	1.36936391865361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165958320-2	2.44979292182756	0	1.426852091901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-127142256-2	3.37824367368955	0	1.33909823026052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157382110-2	3.41768379369074	-0.440382003120893	0.989096966450971	-0.445236430863852	0.656148901837673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93555977734538	2.05066483796074
Merged-chr10-120234187-1	1.87153058837828	0	1.39966802597102	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-26545088-1	2.48573566116309	-3.63409131637089	1.15115093230931	-3.15691992628681	0.00159445124192537	0.0271755375208282	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.18601725775697	0
Merged-chr6-31077004-1	1.24408630914507	0	1.45283766411361	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-25118833-1	1.39255803513877	0	1.66354741098115	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87510442-1	2.40704070143423	-1.10694916574116	1.00324694124904	-1.10336659921735	0.269867995416809	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30707643171337	1.34574950999398
Merged-chr6-145657472-1	2.35270062255631	1.55914193864343	1.426366866917	1.09308620019576	0.274355954346433	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05492522478848	2.17934440858676
Merged-chr7-122979313-1	1.22906576484446	0	1.49105628498291	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-9889840-1	4.7947630841404	-0.874262112025677	1.27302480650805	-0.686759682573516	0.492234180213774	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	0
Merged-chr9-116157364-1	3.35177245084455	4.0969970260605	1.80772693475488	2.2663804733407	0.0234280980998957	0.212013494107125	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	4.11407565701881
Merged-chr13-62627238-1	1.53923683724606	0	1.42703664171614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-42176376-1	2.31708575355595	0	1.34804269670832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83564948-1	2.92070377465152	1.37803269192513	1.1510137521587	1.19723390736267	0.231215397201901	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30765826432827	2.74881841521221
Merged-chr5-30625114-1	1.45408339597531	0	1.4654210571813	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-51868951-1	0.790725558198567	0	1.775893071962	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-121654866-1	1.86227343780713	-0.11105840529396	1.06309729424577	-0.104466830924212	0.91679888931047	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0578051649316	1.97815176992225
Merged-chr10-122665988-1	0.733195004008337	0	2.43013258369467	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165779132-1	2.73145697306816	0	1.32265091500984	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90286710-1	5.47459983555958	-1.17209000076728	0.797851995018566	-1.46905692795819	0.141817349047967	0.796741825357891	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10957120107202	1.58148496924487
Merged-chr8-120312602-1	0.918268648673813	0	1.58754503076862	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115496715-1	3.06945661568848	2.54590019360194	1.14910351808806	2.21555338881736	0.0267221040978904	0.234229726945774	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.04885222765555
Merged-chr2-73279129-1	0.866646059923767	0	1.55248632815889	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39684854-1	2.98789249441818	-0.169310919122799	0.993652243310008	-0.170392529441486	0.864701446877011	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79935891578852	1.58180101474665
Merged-chr4-141476272-2	5.40723200829965	-0.481056859551011	0.879502221168405	-0.546964917168639	0.584402834864825	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.15040551259637	2.24040030834546
Merged-chr15-33183572-1	1.49600709879889	0	1.56389865733207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167978420-1	1.7685281595348	0	1.39607132319974	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127545446-2	3.61597524435537	0	1.32868782699233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-87071210-1	2.65498855843342	0	1.37318085805618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-122268741-1	2.57756547776191	0	1.38964967697852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62066862-1	2.00221607855209	0	1.39900919665834	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30984293-1	3.14300815760081	-3.62208949190101	1.19249479440661	-3.03740486657921	0.00238624713736836	0.0371531344861741	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52124220721298	0
Merged-chr16-92865114-1	1.87833768090061	0	1.3925550369386	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-17773062-1	1.81828213303613	0	1.43858341300165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130738727-2	2.80712264035244	0	1.35589254227538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-90672612-1	3.24629034898232	1.25906118154447	1.69137183862305	0.744402356000841	0.456633094080166	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.543422078079461	1.57272540080272
Merged-chr4-78448837-1	1.77555088608982	-0.198605596805836	1.56354273513622	-0.12702281321945	0.89892234246255	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32405035181012	1.46894927517136
Merged-chr3-87090128-1	2.15485616192294	0	1.38629484957388	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50285083-1	1.23524232243738	0	1.44221748571861	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-15954564-1	1.56497249556516	0	1.4628511382833	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-80602808-1	1.39564994811929	0	1.64248749896117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65415027-1	3.40554086510012	1.18367264514088	0.765255119717566	1.54676867183553	0.121919037085203	0.717835262699965	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66480818707792	2.88854826306555
Merged-chr4-26248387-1	2.36342087692177	0	1.35232161180804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61266929-1	3.73985796173063	0.643848185940424	0.935343920879945	0.688354488191584	0.491229576571515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91925180201757	2.16975473850456
Merged-chr6-129682939-1	3.13986113566315	1.43736524086627	1.24101382972505	1.15821855199207	0.246774859335898	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0.73596151290311
Merged-chrX-57304278-1	1.63005074248212	0	1.39320902770814	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13543032-1	3.73582796410138	-0.511931919073015	0.968119474301043	-0.528790022990309	0.596951119582668	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.5351373410711	2.30889993389418
Merged-chr7-93093933-1	1.47033328609467	0	1.40932493187208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-70899673-1	2.10030083223246	-0.583200339863195	1.21816944719341	-0.478751409507808	0.632115487972714	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00094035035971	0.688405034366054
Merged-chr5-44282304-1	2.79240702055027	3.80636909654013	1.43389740850696	2.65456166805091	0.00794115229911292	0.092516052440334	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.59940250466392
Merged-chr7-98913151-1	5.56891315031053	-1.51705898169559	0.816521887828446	-1.85795262112352	0.0631757427736847	0.440544823751684	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.70232728251741	1.46316345736407
Merged-chr15-35464701-1	1.6492332737407	1.42062172183649	1.42507622907267	0.99687419722166	0.318825577594587	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.609949614787909
Merged-chr7-45678378-1	1.83049206026991	-2.9419796833259	1.40483287308448	-2.09418482418228	0.0362435191152119	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.57277920861069	0
Merged-chr18-8656076-1	2.38722160475819	0.0873585077647862	1.4522792505492	0.0601526929010038	0.952034023040188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr3-115799766-1	0.971710957283521	0	1.52107091756067	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-71311435-1	1.49512341479205	0	1.44424400331464	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-103122800-1	2.65572363941059	0	1.34577093184415	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11454928-1	4.704570138232	0	1.3105593408167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-90321623-1	1.69335521626467	2.69250769385707	1.6021342366768	1.68057559236857	0.0928453799993513	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641446327055861	1.88300575199072
Merged-chr16-22123858-1	1.81129095115288	0	1.45073036044018	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-126955911-1	2.59397150635287	0	1.33560578897491	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-81184352-1	1.97216070344178	0	1.44188087393016	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-5047575-1	2.34751617117303	0	1.42773519154579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117276078-1	1.75313441964376	0	1.41639338247409	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141470115-1	1.3436394303461	0	1.39609634177583	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76199203-1	1.34908950266665	2.42891388465883	1.44475324055253	1.68119635691554	0.092724780913361	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	2.11480110409737
Merged-chr9-111552594-1	4.75185999863494	-0.197520874166172	1.08714383125645	-0.181687894910732	0.855827666318784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80100629806392	1.90781241071831
Merged-chr12-26390240-1	2.08630261107138	-0.129096683116726	1.29726742845223	-0.0995143177769834	0.920729920385919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.6051403894369	1.72320011534497
Merged-chr9-107278171-1	2.99843249125645	-2.99386994561275	1.15308667780673	-2.59639626685077	0.00942073470429805	0.105920049894539	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76991142904982	0
Merged-chr1-7109584-2	2.05257994759095	0	1.47736915397891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58063577-1	5.38816297248798	-0.00777546313329841	0.83330071240347	-0.00933092101994227	0.992555110213178	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.39422521822237	2.30670691456252
Merged-chr7-29042354-1	3.58233406805368	-0.943044780425344	1.12875009799737	-0.83547703083127	0.403449174235963	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76956838203344	0.73596151290311
Merged-chr11-117208020-1	1.61434882365609	0	1.51099868876469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-75425894-1	1.40735717472926	0	1.69316425077647	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110464710-1	1.82720390944894	0	1.51122031532992	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-64063012-1	3.12592184861182	2.23918397816297	1.24473473839551	1.79892462955547	0.0720306039722207	0.486351709771517	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.03295826569721
Merged-chr16-70868456-1	1.51954760664144	0	1.38277768633968	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-44284580-1	1.66030543455767	0	1.38806968605781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-33124666-1	2.26284327162337	0	1.39528257213259	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-63844305-1	1.11998294608019	0	1.44719302136745	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72070608-1	1.89480159157317	0	1.45670965001378	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-41337540-1	2.02549275785769	-3.80703741580754	1.27408074174124	-2.98806605506383	0.00280748869384118	0.0422325405588733	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43109871359775	0
Merged-chr2-25694829-1	1.53892079891682	0	1.51882850846883	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72038407-1	2.24820950427186	0	1.3401081976659	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-39344237-1	2.21396984424348	0	1.35017751332744	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122739645-1	2.38025522944392	0	1.42387695623164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59267491-1	2.26239714590373	0	1.3604046443901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-59522045-1	2.53671544576452	0.83549314932413	1.12816581425074	0.740576552462737	0.458950229290252	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10819569745922	1.35032549026822
Merged-chr8-56287500-1	1.78288018586276	0	1.41546664535375	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71955760-1	1.8969690427602	0.765827799029495	1.45673944561105	0.525713641747553	0.599087184046446	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	0.469435083901436
Merged-chr17-30658252-1	4.65456466078401	-1.45987448301637	0.942113934062511	-1.54957317818368	0.121243994815223	0.715442485569404	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.19707670280132	0.666688015277142
Merged-chr1-166169240-1	2.01957129016615	0	1.5335002659592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59910504-3	2.67884979310688	0	1.36776501321356	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8483137-1	1.40539293182594	0	1.48543481835081	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77318928-2	2.88511443466891	0	1.33204567955206	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41291276-1	2.04164955258714	0	1.35968927982929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-108519023-2	2.68249483510946	0	1.3895479114944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123129128-2	2.65795488682465	0	1.33204919734352	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75186363-1	1.22488481191272	0	1.9007727407981	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-64598297-1	0.978733242110827	-0.774265041032387	1.77890095241351	-0.435249101408321	0.663381625524101	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31959125495611	0.683637474991079
Merged-chr2-145858625-1	1.47102696354213	0	1.41303032086361	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155820071-1	1.59893571220435	-1.28328982783938	1.28675379024231	-0.997307983524745	0.318615039765061	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01879126622049	0.666688015277142
Merged-chr9-48561661-1	3.52722832573509	1.40018264531009	0.935785569646352	1.49626441219781	0.134584765102094	0.768152332986413	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25199616735135	3.88087153413708
Merged-chr7-113186624-1	1.78806082685532	0	1.54105401553063	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62267415-1	1.68453477411551	0	1.55244266715021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96625320-1	2.05805314545091	0	1.50929883161696	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98344518-1	2.33009111460367	0	1.44160013289367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106717392-2	2.49464898371982	0	1.34160717379001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-95153410-1	3.9258801747383	1.68914174728588	0.866584196997278	1.94919518857922	0.0512721193439228	0.377592366439925	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44362823028085	2.70053333418224
Merged-chr1-144355198-1	1.11598870179612	0	1.8751916302318	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-64018188-1	1.99936645911024	0	1.35501815799831	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160361360-1	4.79621868647732	0	1.31007534962917	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69752124-1	3.14443065374045	0	1.32787345917106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98782184-1	1.73904229394686	0	1.43395425917057	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-30468772-2	2.95052018792446	0	1.33588598903935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45045508-1	3.1035639745003	0	1.3216992221328	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-52097016-1	1.63454344331009	0	1.37020262573079	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55389929-1	1.57239816518159	0	1.52414089205469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135355665-1	1.30747363085496	0.00116873637101102	1.55682032282207	0.000750720140197321	0.999401012046916	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	0.469435083901436
Merged-chr4-144906060-1	1.71784628330714	0	1.46144995447606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5092153-1	1.65401897274995	0	1.38984232908617	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-75372174-1	1.21579437721312	0	1.44331922237708	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-58724675-1	3.75446897324328	0	1.33050910953687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-8983342-1	1.29946689518937	0	1.4234762855193	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108567357-1	2.77709426710812	0.200125648858884	0.861116593086657	0.232402499807299	0.816225407508972	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.97024055521096	2.1359713465465
Merged-chr17-70705139-1	1.82449649009185	1.42680594819143	1.49437012252168	0.954787523310328	0.33968515816425	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.61242769162773
Merged-chr10-98666749-1	0.931055950787492	0	1.91090213883303	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-79806850-1	1.27186188786417	0	1.45274357517316	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91210787-1	1.71469413420151	0	1.3760013658958	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117284241-1	1.29573073816285	0	1.55982515644983	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46921323-1	1.87616833805171	0	1.39140545052432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136474185-1	2.44275640092493	-2.89123738754571	1.52264324184743	-1.89882784626408	0.0575871146585104	0.411941718059663	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.46246015818418	0.306240821987646
Merged-chr19-55921619-1	1.22197570370105	0	1.68881890148476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-35441696-1	1.8715976009866	0	1.42333169732876	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27128677-1	2.48370871508773	2.21179631498391	1.48189019269298	1.49255074761275	0.13555482398672	0.772003270719557	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	1.2679693671925
Merged-chr15-35358896-1	1.27991628324328	0	1.90066161808676	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59415147-1	2.29837989050876	0	1.41923592106504	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-71257232-1	2.70080711226546	-0.579890899047187	1.13628250070127	-0.510340429153225	0.609812983367202	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.6683298586954	2.10370544471103
Merged-chr4-152171722-1	1.94086203987448	0	1.3737030592164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101775983-1	1.74866591362892	0	1.4675795566613	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124321643-1	1.19734562136252	0	1.40272216398459	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-137863603-1	1.73929378060299	0	1.48006865521031	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-110382639-1	4.11244309554111	0.891859972479133	0.859859468325521	1.03721596997231	0.299635216981812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.36394532586931	1.37490486545505
Merged-chr18-70520854-1	4.05780795075554	0.731176884016299	0.923305578683345	0.791912126274569	0.428411915813571	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03489609172231	2.25258823419701
Merged-chr13-33953039-1	2.20762449882005	0	1.36339766812654	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125540358-1	1.85281300422515	1.44048651373645	1.29594838037071	1.11153077974016	0.26633994886478	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499615150807969	0.733321818366247
Merged-chr4-58902097-1	1.52452655272623	0	1.44737070884248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119897766-1	1.17051828199677	0	1.47133478542776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77793770-1	3.57766269946753	0	1.35183617634928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149843594-1	2.69986295983009	0	1.32797253503069	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-124645912-1	1.00210907905326	0	1.50197951763839	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66985592-2	2.00013388881457	0	1.42641404766387	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-28165756-1	2.61986104091304	0	1.34235506737166	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-97665682-1	2.51120445032961	0	1.34591232700936	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123207565-1	3.05113657898411	0.175809521737405	0.987387538634697	0.178055236529017	0.85867959627305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28005587849875	1.9069419865589
Merged-chr1-173391937-1	2.91899211079784	-0.961261666799747	0.996606726267589	-0.964534596710768	0.334777971801897	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.33461618261689	0.845523456341755
Merged-chr2-150868882-1	1.16750751797001	0	1.51049594658346	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121500263-1	4.16317958294858	1.90029829880052	1.08307059867309	1.7545470268777	0.0793368192660361	0.521931319013228	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.34557707159302
Merged-chr12-76319397-1	7.12804636429598	0	1.29971922373691	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74703714-1	3.59383370817625	0.255256704804218	1.03142869965875	0.247478768904405	0.804537720530417	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30789428758254	1.35032549026822
Merged-chr18-9495637-1	3.77589734318571	0.0845508903082243	0.817033800665638	0.103485180465411	0.917577910619223	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72732698632624	2.56041795642383
Merged-chr16-20213803-1	1.30044617278324	0	1.46808515297771	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-31432037-1	1.4217384347324	0	1.43792460405903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30914948-1	2.01190958013818	1.80598301986581	1.4195988647614	1.27217840524925	0.203309738479113	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32799110226898	2.11035253202893
Merged-chr16-33693824-1	1.71928017628934	0	1.46048072302034	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-4186968-2	2.2062512430419	0	1.34806914344485	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-116108949-1	1.57161790450124	0	1.51472515863144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-146965285-1	2.25067572544955	1.42882813571471	1.46781854924502	0.973436489441854	0.330336410874376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.593738791144649	1.15637648126681
Merged-chr13-37619430-1	2.34734843424797	0	1.3703219277403	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-3322888-1	1.88899718016864	0	1.35380973875413	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-81053766-1	2.11308982024068	0	1.39255964837958	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40479638-1	1.40915848688353	0	1.49586775584223	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-114596419-1	1.41038688656579	0	1.49926709308695	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50379034-1	2.1937052309777	2.42857122862353	1.19910027681312	2.02532788590292	0.0428337069322574	0.332029823629335	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.731605514577872	1.88893749265627
Merged-chr11-54155097-1	1.51828615501934	0	1.43040479088828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30677104-1	1.97919219504434	0	1.34784459101484	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-129544389-1	3.17002741783563	0	1.31169928244413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-58383646-1	2.78876218247944	0	1.32071560042209	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80039779-1	2.01589634049982	0	1.35222777952267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-57804927-1	1.00825621467954	0	1.63812326326186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75756375-1	1.05821358493224	0	1.72699327024473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-31172159-1	1.4818992928288	0	1.38732956074234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78821753-1	0.628443736527653	0	1.92610815883937	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-60074582-1	4.21363267264964	3.38789851001427	1.61596087123322	2.09652261408335	0.0360358560078179	0.293156388068448	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	3.20522465958855
Merged-chr13-107794736-1	1.27412722315015	0	1.44107178409002	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-168824339-1	2.33163478713826	0	1.38896513305736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67682495-1	1.38889719200531	0	1.49300653090612	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-5802809-1	5.01418970054974	-0.124140631700624	1.04936201905384	-0.118301052874542	0.905829123185695	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21061780056754	0.733321818366247
Merged-chr7-16199513-1	3.34531780688267	1.30690765746833	1.06943983015628	1.2220487965904	0.221689174534355	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.13899832209312	2.3532311534736
Merged-chr16-65469920-1	5.77545726654126	1.08749617197541	0.927471098893347	1.17253914787534	0.240980664372366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.80248096346514	1.25271128942763
Merged-chr8-128652907-1	2.80426039554001	0	1.3314443615097	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34007528-2	7.91750433465267	1.96504138856263	0.727832771261635	2.69985285927206	0.00693701490318666	0.083634014623448	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.1011534281861	3.71006424143027
Merged-chr13-37520163-2	5.66529958827009	-0.372178919708718	0.683124043262231	-0.544818943762237	0.585878048423333	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94406604028749	2.63349449381055
Merged-chr6-88500988-1	1.4163253483925	0	1.47457200692491	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106643478-2	2.07799843413936	0	1.39052633892878	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-5006449-2	4.38942769246079	0	1.31359654879562	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-80672384-1	2.46081012180002	0	1.47744136644401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63206493-2	5.54663081634496	0.983012113928861	0.715668704260092	1.37355749675427	0.169579099741742	0.904375732614369	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82261620206015	2.27378670316772
Merged-chr12-119106428-2	1.40936800569472	0	2.4332508969812	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-145950225-2	6.49232830422298	-0.85059682742758	0.658282171806934	-1.29214623129282	0.19630650813751	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19848477819627	2.50077645420998
Merged-chr18-10894272-1	1.27718654855309	0	1.56669812913277	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138964062-1	2.43581184566972	0	1.32941060413053	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-7892903-1	1.60130229061826	0	1.43634186006473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34309400-1	4.05789855802087	1.13399483150886	1.02400296624611	1.10741361977297	0.268115140049366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03916794530514	1.45547307112966
Merged-chr14-17712062-1	1.45297897795798	0	1.53351976592844	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95336563-1	1.78710164193235	0	1.39338868885173	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-53346717-1	2.09423552818543	0	1.41806194848846	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-21950522-1	2.02482328134215	0	1.40230934269568	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126691808-1	2.03080170788358	-2.92225621871211	1.44596715631164	-2.02096998258673	0.0432828725234742	0.334638261703614	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44581390068175	0
Merged-chr10-21054949-1	1.47165502050181	0	1.50010314311069	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-105675423-1	4.79255491565884	1.01581845615775	0.830326907600176	1.22339580574798	0.221180236765863	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69470474459763	2.70982598363525
Merged-chr5-86187003-1	2.17921332094833	3.3474679211417	2.00343551314344	1.670863823258	0.0947485785978311	0.59544533728158	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.43116362910629
Merged-chr18-20695175-1	2.21110129199697	0	1.36894816752442	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83616462-2	2.48458861718366	0	1.36417917726081	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173546162-1	4.05697204134722	1.41571452927328	0.918567687540632	1.54121960577963	0.123263347404753	0.723178909993805	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14279341688656	2.99844440789185
Merged-chr6-7648643-1	3.53881772748254	-0.636740095900461	1.08720533702902	-0.585666823196866	0.558099433206744	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4261328811769	0.735627456805112
Merged-chr5-140349147-1	1.03404323266809	0	1.52441909722779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130001948-1	3.84510008227008	-0.178601652479854	1.3588439702455	-0.131436468344181	0.895430041320908	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	0.306240821987646
Merged-chr5-150215135-1	0.896617481516193	0	1.96510930700217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24675533-1	2.23522568964568	1.65019799841353	1.33913729095187	1.23228440396919	0.217842863622737	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33851648399519	2.3733717703108
Merged-chr7-4460710-1	0.890614844709779	0	1.77310081393729	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-87070407-1	3.03526272881264	3.80788810849237	1.27606461439603	2.98408722061042	0.00284425681623142	0.0426677699525846	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.398538652338404	2.18885111947556
Merged-chr15-8706488-1	2.15828694195399	0	1.36544446052824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-85151584-1	1.91340650097204	0	1.39778282675217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94594451-1	1.86218100716985	0	1.37666705235734	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-76924955-1	1.29499558915723	0	1.56095360771637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-76222508-1	2.2410469635461	2.77247178339301	1.34692039959673	2.05837834531506	0.039553828793603	0.313942001256745	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.989878296978726
Merged-chr3-127760140-1	3.76498445770768	2.54014683518148	1.15331917873134	2.20246648284792	0.0276323741807648	0.24059495312675	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.34918537160217	3.27065540242443
Merged-chr16-50306908-1	1.69779476411636	0	1.44006395998567	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-121155501-1	1.0404084456047	0	1.71094803337191	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-139416933-1	1.32251167722149	0	1.59808227475897	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-159503309-1	2.35308449883095	0	1.36880697924919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-143988944-1	1.82469943770404	0	1.3566550533487	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65170782-1	2.25476425727292	0	1.35711232166267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34189688-1	1.6447170757894	0	1.41430174550936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137801864-1	4.04033898718419	-1.07500842062902	0.95669792843926	-1.12366546291447	0.261154973319565	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54288390762458	2.01243752527112
Merged-chr5-148536347-1	2.31957872134993	0	1.39245324292912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155121576-1	2.27099807056219	0	1.49567277932586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25632704-1	4.60829036553936	0	1.30986181425237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20672003-1	1.37493843527834	0	1.50671694658676	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27122898-1	2.53556426829465	-1.51040282005348	1.27116397931128	-1.18820454688452	0.234752832768812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.730323035410327	0
Merged-chr18-67983804-1	2.48577769698334	-2.16548580004408	1.42521883603324	-1.51940582407063	0.128660376889309	0.744746300665144	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44258057430331	0.916190436775555
Merged-chr15-67107212-1	1.28201465381248	0	1.71813192698632	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-60813199-1	1.15568505175551	0	1.56567782963709	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23332428-1	1.73149383664136	0	1.47253061329988	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131605407-1	1.867868768498	1.57444732496575	1.56071532995033	1.00879852638845	0.313071267949613	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	1.29358708977899
Merged-chr19-6663576-1	2.59017404635615	0	1.36786619303896	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-114886204-1	1.37416169957174	0	1.53998451904634	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52328831-1	3.43021064943179	-0.370243839556496	0.739024958568506	-0.500989628650242	0.616378422069201	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8247443649483	2.20491078807447
Merged-chr5-62751880-1	1.28591933719414	0	1.44201317392743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-78130195-1	2.46631343346118	0	1.36726024415338	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3624488-1	2.41224302080692	0.325137738481497	1.40526724473616	0.23137075150609	0.817026785651664	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.694454456467349	0.581381506691384
Merged-chr4-47037499-1	2.74287133848327	0	1.37696670953511	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-85161909-1	1.2382868841699	0	1.4044869480502	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-46531837-1	3.44535788360352	-0.544836354127152	0.816200956281781	-0.667527218553093	0.50443542967537	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58932260525632	1.94767211644437
Merged-chr15-73610049-1	2.66769390212866	0	1.4154128042132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-91161424-1	1.01352933211041	0	1.59228978678503	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-79465482-1	1.98910835242754	0.0882775867903879	1.46606442824169	0.0602139886145816	0.951985204627781	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr18-24112707-1	3.0113323246891	0	1.35218423092902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-4107565-1	2.06599189360453	0	1.34575013215411	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103306587-1	1.59703353704359	0	1.44388115765032	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102628433-1	1.14746846310928	0	1.78587554328712	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153408575-1	1.34217034310514	0	1.48291781395944	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-39006907-1	1.20301758545535	0	1.72107008841603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-99005993-1	2.23738510492099	0	1.34827909174034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123116470-1	1.75553892317343	0	1.4177183643148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-49983330-1	2.67613612316105	0.515151489605911	0.926643050090619	0.555933041914611	0.578256629223258	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52908466937175	1.79795952835561
Merged-chr2-118805004-1	3.44843562874147	-1.57936894982987	0.858969877909385	-1.83867792159818	0.0659625726612713	0.454778463085402	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93667498423034	1.20539659680455
Merged-chr11-58341497-1	0.963382183479799	-0.650112975226842	1.76080924702669	-0.369212608534755	0.711969258541224	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.01074310944854	0.890396206374751
Merged-chr10-122687431-1	3.62907909235648	-1.1069442481597	0.866795079915742	-1.27705414325529	0.201583132842067	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73583111503519	1.46928333126936
Merged-chr7-125762530-1	1.62000452098698	0	1.66007435184473	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-54019665-1	1.29106073925498	0	1.5095720914107	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5786758-1	1.07556172515926	0	1.71009754138619	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-82808790-1	2.10850253051301	0.830122863846129	1.45822159851951	0.569270723111581	0.569172431916931	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.944721624266036	1.00182956598795
Merged-chr1-138542058-1	2.53596608236804	0	1.34869723141712	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85455967-1	3.69428476375049	0	1.33490626082076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-17295412-1	2.61867591881902	0	1.35517602103402	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70627949-1	1.78373887877952	1.94360523665653	1.41268652437631	1.37582202641496	0.168876740349206	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr7-30812467-2	2.40906855592792	-2.44032012605527	1.24470421233496	-1.9605622780672	0.0499301063780746	0.370315138839553	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67348811117754	0.306240821987646
Merged-chr5-130067717-1	2.47757325455674	1.10286879864782	1.27345112767215	0.866047211928625	0.386464271788482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.576613669504516	1.40264952818025
Merged-chr11-110608693-1	1.77061211231807	1.43425729759764	1.54822669832405	0.926387136425314	0.354244826702232	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.73596151290311
Merged-chr12-86687190-1	1.50807764851446	0	1.55316750651046	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-13615257-1	2.97301536690822	-1.42268976666607	1.26500625218122	-1.12465038351625	0.260737214545483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74000136576932	0.563523181795778
Merged-chr13-30766600-1	1.70702145149372	0	1.52007506918176	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-87949192-2	3.43068854909946	0	1.32473035137444	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82906310-2	2.53443437890036	0	1.33047074921345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-134486088-2	2.65884463821118	0	1.38640239999783	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-26104880-1	1.45378462657887	0	1.39406461341653	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-79785196-2	2.30160529302106	0	1.37142628003748	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-140577585-2	1.86023796266326	0	1.36780536209486	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-106220626-1	2.39478743298524	0	1.36126752463407	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119079328-2	3.03518268695357	0	1.39409172054773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36127872-2	3.64288328540675	0	1.32496627931775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85252594-1	2.38993813769903	-0.00237545911015001	1.13220276489273	-0.00209808630027066	0.998325970561952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2545004106158	1.45601292859778
Merged-chr1-135110328-1	1.66196284130687	0	1.38376470200577	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72135502-1	1.42362607909693	0	1.5464831485868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-107521886-1	2.74551793999394	-1.56181294923072	1.07297668062785	-1.45558890274934	0.145506297590539	0.810800249198548	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.52718276080163	0.773587911294612
Merged-chr15-76550325-1	2.21200143437948	0	1.4047892610019	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-75219403-1	2.31936475606297	0	1.36208600864486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-166115963-1	0.761998411289436	0	1.76798688519992	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-148893674-1	0.871633857708216	0	1.64440346012	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-81355533-1	2.40963424246222	0	1.35546394084076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107565740-1	5.33358893730172	0.975308347593943	0.741832356850079	1.31472877744944	0.188601071407429	0.97703548534881	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50286576297176	2.31447273151311
Merged-chr7-104240763-1	3.1440767682406	-1.19915852534113	0.991139871682641	-1.20987820145439	0.226325632907547	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4681915253493	1.57481894122996
Merged-chr15-103281551-1	1.64462220730478	0	1.44072646357529	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45944895-1	1.27968298405039	0	1.49784678541165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157308555-1	3.52435591929427	-2.44682510323508	1.25042689761256	-1.95679180278896	0.0503719512244529	0.372774854951825	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8717419596828	0.666688015277142
Merged-chr19-29505757-1	1.22695092973066	0	1.55542249082834	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47699878-1	3.1705160680287	1.89766318406555	1.29939786511246	1.46041734792392	0.144175407858524	0.804825405939102	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr3-90086178-1	6.02949324134949	-2.4573072362627	0.903286966816534	-2.72040594687536	0.00652018172690855	0.0798893049054299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08633856341185	0.869764003783424
Merged-chr10-6462371-1	1.10577045909148	0	1.78126599603468	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70545934-1	2.58774034095495	0.108345855937934	1.46377071849538	0.0740183244335583	0.940995804466408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr9-41046169-1	4.86583310356	-0.780417809446695	0.752696670578506	-1.03682909723366	0.299815512374894	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.91240065233304	1.96407117436956
Merged-chr3-126399660-1	1.76666204741757	3.96804372190784	1.45564288682369	2.72597335364745	0.00641121738921038	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.86354445431429
Merged-chr19-25050950-1	6.90959526898154	0.713610648092784	0.608045741446029	1.1736134297984	0.240549899494378	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07207891566387	3.32926715505813
Merged-chr5-112153991-1	2.85175144224278	0.375833484819503	1.16472793050944	0.32267920685573	0.74693820100052	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	0.733321818366247
Merged-chr2-129598567-1	3.0282873817128	1.79642115304478	1.0474694587623	1.71501053134996	0.0863432961111434	0.555147917113412	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.964241918767175	2.78424187151255
Merged-chr2-44818875-1	1.07643933432583	0	1.64061474230717	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36749895-1	2.7056351428589	-0.997607507354135	1.15828709979687	-0.861278268167785	0.38908480179243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18294433497504	0.609949614787909
Merged-chr6-26393116-1	1.4640362949004	0	1.49941473024056	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146778440-1	1.98707999983337	0	1.37929568453949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49195753-1	2.50731345846939	0	1.38884507941172	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173388414-1	1.07528759846714	0	1.52972874648497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-181060377-1	1.80179182095648	0	1.39996070735231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-100745290-1	1.74348190576452	0	1.37082978774889	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52807850-1	3.20168873030228	-0.312603236305424	1.05184760606298	-0.297194417236432	0.766318083832925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55555031775645	1.6918997744453
Merged-chr12-35607909-1	1.9988527906268	-0.329475593254752	1.13958169243912	-0.289119766876524	0.772489727462314	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74768590972798	1.34574950999398
Merged-chr10-125316780-1	1.61399503222639	0	1.46288752856121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47733710-1	16.7124827574112	-0.741926057504103	0.532651536014091	-1.39289198911552	0.163652455263127	0.881073353885748	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.40183825454053	1.77167105195599
Merged-chr1-67017655-1	1.02701438421816	0	1.65035660600164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14989676-1	4.57876028142819	-0.227689251363721	0.918629055257735	-0.247857663613567	0.804244537461259	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.90550426699171	1.84396608304482
Merged-chr14-13966686-1	1.92239458448015	0	1.37402895163219	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-104662574-1	3.58637776724461	5.33746629460168	1.6822097889502	3.17288980819246	0.00150929796445851	0.0260733867843246	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	3.75554977558781
Merged-chr11-8576853-1	3.87480394149094	0.195393117673817	0.626280516114185	0.311989775581958	0.755048293697812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.80363603326459	2.88838860959597
Merged-chr16-91823353-1	1.76623499971571	0	1.4161100624881	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-110499393-3	2.83503244271255	0	1.39553506476505	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-64494367-1	1.52635557913708	0	1.56300281981615	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52419503-1	2.37519599284489	0	1.38220802951638	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-76237583-1	1.978638661366	0	1.36955574707213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22423467-1	2.36782085419279	0	1.39272222908288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-23482151-1	1.65011074843673	0	1.48349235012016	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-102440448-1	2.52373892360827	-0.437728923514836	1.36288770650109	-0.32117754194042	0.748075850236985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	0
Merged-chr16-19974625-1	1.03871179380494	0	1.68552221455591	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-95915143-1	2.88712905305987	0	1.31794480413021	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-58046525-1	2.92616712553235	0.427371157621815	0.985863570460799	0.433499289787186	0.664652081929226	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.89593536936389	2.53974014236321
Merged-chr9-45263282-2	6.05448891968313	0	1.32657684274815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119724588-1	1.86718491863795	0	1.42927528340272	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42176310-1	1.93466259358758	0	1.37629333949066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81129904-1	3.46421373843672	0	1.33341783014549	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-142867991-1	2.391213282127	0	1.38328100900985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42161884-1	1.07262917584912	0	1.4800675068425	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172422724-1	2.7064079413924	0.0905537442574278	1.48359879564959	0.0610365447336314	0.951330104809762	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0
Merged-chr16-18406108-1	2.05937005794673	0	1.42416886907563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-102067372-1	1.96427822344563	0	1.41578402973296	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-15730371-1	2.45938921449357	0	1.33184177116633	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102644989-1	1.64931618742812	0	1.40578554934425	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-12569453-1	4.50778139263263	1.3550824515698	0.802211069491792	1.68918443425152	0.0911840910160573	0.57832821620259	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69295488025085	3.15904272356132
Merged-chr10-99085591-1	2.20363860755247	0	1.42695859611121	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-20292087-1	3.56784390328095	-0.253531217566427	0.679423428638736	-0.373156424815068	0.709032025577269	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8924715696899	2.25143168552214
Merged-chr1-172565126-1	2.14406743440534	-1.36567293261462	1.3933740226702	-0.980119415458535	0.327027176367542	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30464995987803	0.733321818366247
Merged-chr10-94844947-1	2.74785228133696	0	1.34764209060439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-97530608-1	2.82237883799368	0.180822484101067	0.869001270456561	0.208080805228357	0.835165874348135	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.06894031519949	1.8834919615147
Merged-chr9-25549311-1	1.68784728318665	0	1.40849614842395	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-18191049-1	2.34051837992462	0	1.44035362305662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-67820810-1	3.07134306167398	5.17421580531713	1.18816838100319	4.35478328496545	1.33198626695624e-05	0.000636722564744127	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	3.87663144399141
Merged-chr18-57881924-1	4.28939983009342	0.273691593981014	1.04281347721089	0.262454983524983	0.792970687102692	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17745944755967	1.17595087342351
Merged-chr6-131022417-1	3.50949938438568	-0.535075576873803	0.916463142623248	-0.583848440802784	0.55932228433673	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14556417119209	1.46894927517136
Merged-chr14-104919815-1	1.18166003341777	0	1.72471391982179	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-30920881-1	1.35756649894414	0	1.43758178476696	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-118428522-1	1.99485891770102	0	1.42925705781351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-28986323-1	1.53295165824675	0	1.40437847468589	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25959523-1	2.54976105008277	0	1.33098480071551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-81113230-1	3.14059118928055	3.49980238871136	1.28020128505993	2.73379071678366	0.00626098254537683	0.0775014520572446	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	2.83508240977611
Merged-chr5-96769266-1	4.93192920428116	2.38225130634505	0.676967146658341	3.5190057864763	0.00043316725979698	0.00987639489137944	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69859676491855	4.24383330055997
Merged-chr16-76054464-1	1.83288803101368	0	1.41695615315338	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127426918-1	4.89988108740248	0.574502205858139	0.811373727768789	0.708061139024026	0.478907290935527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64306070357648	1.93177134892138
Merged-chr3-60590680-1	1.98248480110735	0	1.43529295172451	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62077061-1	1.41896285662537	0	1.46353019193666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85281912-2	4.06676922603784	2.46216480882148	1.2404332951659	1.98492318645169	0.0471530182681773	0.35555748116228	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.683637474991079
Merged-chr18-62068200-2	3.08898449296718	0	1.33253049363359	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-13164519-1	2.18876961785201	0	1.442554596822	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28909457-1	2.41332165484845	0	1.38006894006875	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-64068472-1	2.98012590732482	0	1.34539934041997	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32159955-2	2.60244104752902	0	1.35992978748397	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171974038-1	2.7170535298099	0.363547376891088	0.975561679627618	0.372654425120365	0.709405660404205	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79821348100227	1.3480509837169
Merged-chr8-91411025-1	1.43652674708801	-1.08983546734506	1.1595721862128	-0.939859958959951	0.347289398418848	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96664215140299	1.14490468848716
Merged-chr11-86999718-1	2.00646343927218	0	1.41993696670916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43090546-1	2.84832624168298	1.61169152611644	1.17445967337293	1.37228341053876	0.169975227954368	0.905822969002293	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17531244888202	2.61093010937348
Merged-chr5-32104658-1	3.17402094987227	-4.03592265980061	1.08169743527096	-3.73110125641524	0.000190644573569792	0.00526536783790855	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.93448327716118	0
Merged-chr8-85005419-1	3.7106469524801	0.949590730838583	1.20424505184867	0.788536128407451	0.430383174623021	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.06405586741366	1.47126464988938
Merged-chr4-9337618-1	1.97318217729741	0	1.4173828379458	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123015262-1	2.2179703603364	0	1.42884034343221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73360467-1	1.79885265928356	0	1.46932096076041	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99371755-1	1.21114897829922	0	1.51208047266331	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85899460-1	2.07909464832848	0	1.40778866953215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35726723-1	5.89139398983027	0.710019666415389	0.82079030743972	0.865043921668792	0.387014682204277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66146437225366	3.72487234908502
Merged-chr14-20845469-1	2.78879852801795	0	1.34341555505567	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-83566355-1	2.53219915054488	-0.356292880358529	0.986626458168384	-0.361122365418789	0.718007974616993	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.51569740227844	2.0295486026821
Merged-chr11-93861015-1	1.52955526918009	0	1.43278805495201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-81401430-1	1.19967926969129	0	2.00269628380734	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96503498-1	1.95116654385032	0	1.40633768719932	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-96135048-1	2.066227931978	0	1.35506975977056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-79322691-1	1.76371591150558	0	1.36213774613141	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-101999641-1	1.43539065038701	0	1.47980728224961	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-76005866-1	1.91628547093583	0	1.39585947329693	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-34991018-1	1.84986899545707	0	1.46135263901668	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82792457-1	1.80339943998736	0	1.41328453916707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-185278569-1	5.59095919697234	0.610399324518005	0.739267997826805	0.825680708907149	0.408985238236491	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12770432123152	2.86653995946335
Merged-chr14-27186430-1	0.910184779852811	0	1.91532756947578	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-105749886-1	2.48350266305231	2.59532912569456	1.81620623954009	1.42898370746252	0.153008916286357	0.841725634209165	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.560580438136776	1.65917935940748
Merged-chr11-114980335-1	1.08808686655787	0	1.8328572009223	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123034812-1	2.41486239957489	0	1.38683518026452	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82535338-1	1.87198797479317	0	1.44931958342957	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181245746-1	1.45708344081754	0	1.46507599915714	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-99155336-1	3.63663741654829	2.5586699490027	1.04091219197332	2.45810354488412	0.0139672896743085	0.142063581798588	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.732715880459263	2.62900736250262
Merged-chr2-129174585-2	2.11560959571291	0	1.36696567321036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-94095011-1	4.4409959533003	3.17985708070979	1.00365692401066	3.1682709545837	0.00153348528456928	0.0263997109711353	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.866762985398991	3.70095120031762
Merged-chr16-57398830-1	2.13184562182777	0	1.37068926541616	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-37605887-1	3.07683368751124	0	1.36620197568775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-101792357-1	1.66858361788184	0	1.64186483417169	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-51103472-1	5.70286420438937	0.214832216560297	0.822834691687052	0.261087942366441	0.794024689886573	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91645225390608	1.55093274776611
Merged-chr12-8435644-1	4.82252115955588	-0.488408543897403	0.956473055046972	-0.510634922040138	0.609606717766748	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01949219957052	1.56763655772049
Merged-chr17-67222477-1	1.4711348978279	1.86924245869962	1.72869413979537	1.08130317311128	0.279562276418138	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.666688015277142
Merged-chr1-172496669-1	7.1835239227722	1.1361917017912	0.814263519882395	1.39536117491215	0.162906953005893	0.878613908035299	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.19604083157533	3.71489092404964
Merged-chr10-78264934-1	1.68662598543208	0	1.37602643213234	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68766923-1	4.3320638345971	-4.06106325334753	1.11946115698408	-3.62769465292424	0.000285963169494492	0.00720375839390403	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94766134786897	0
Merged-chr5-32720790-1	1.43582081151708	0	1.8387204105944	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-121938316-1	4.36575311599704	0.448607136108872	0.851228505907281	0.527011411149494	0.598185664191234	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.50466283782913	1.65946941398048
Merged-chrX-143051700-1	1.14482901268286	0	1.40997886224993	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-115245696-1	1.97710075931503	0	1.37933127861845	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-86418864-1	1.94128408572339	0	1.3950345770584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22113336-1	1.9281299011023	0	1.42219269789671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9100835-1	2.44960769201673	0	1.46114174860406	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19069031-1	1.86170488101077	0	1.44828450890353	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-59583517-1	1.75720386622633	0.173936394389842	1.42099520525933	0.122404631448492	0.902578570729207	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.469435083901436
Merged-chr15-39769115-1	1.2393252274833	0	1.47215579461121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-13474465-1	2.76786756213336	0	1.3890453303891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-61738528-1	2.2146506994094	0	1.36062821404234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-67869770-1	5.03131557575565	1.13828663581579	0.866613047081184	1.31348892063144	0.189018251849469	0.978420998523084	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.20329560748645	2.93205587445077
Merged-chr16-90214188-1	1.32035393770313	0	1.43401296708206	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99162123-1	2.11834250473504	0	1.3350989148604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-38645105-1	1.98648251489765	0	1.48658041887025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45079370-1	2.48235316452454	0	1.3500546810114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-116669484-1	1.85143066385288	0	1.45209243984157	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-37674875-1	1.36248534053077	0	1.60447431434807	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36054774-1	0.55579114460854	0	2.16835359818001	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102698626-1	1.20431448970325	0	1.57442963433201	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-42227470-1	2.16090638315102	0	1.34857497734395	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-52458945-1	1.91956208933092	0	1.45464270944457	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30753309-1	1.52329086193078	0	1.43414330450208	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-164014794-1	2.05283418746556	0	1.3848149389863	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60273016-1	2.13940693043847	0	1.37051447400213	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169862006-1	2.02059493535374	0	1.37352002591253	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-72874522-1	3.35280357272659	2.63771991790239	1.15378071060377	2.28615359371199	0.0222452745523986	0.20373366655936	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.29606516661881
Merged-chr15-99825212-1	1.19026050947017	0	1.59111964412048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191122053-1	2.08637642847603	0.339826176478004	1.18580023104804	0.286579617359037	0.774434223083293	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	0.851599296279844
Merged-chr2-35906629-1	1.91266915056653	0	1.35617887635233	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120421459-1	1.60578228624846	0	1.55400968956221	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75436630-1	2.22677829555932	0	1.35246340810618	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-43906151-1	2.93185116818713	3.62888122814875	1.23685071979467	2.93396864316106	0.00334658015786157	0.048179252477555	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641797200824821	2.9353401517067
Merged-chr6-136056513-1	1.5874817288126	0	1.68090134708895	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-47666439-1	1.59467645544863	0	1.41632764051415	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-94808918-1	1.29321833369507	0	1.46668460960798	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-147450458-1	0.927795461210104	0	1.57166568068319	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-21379038-1	2.30446465945543	0	1.38501770417518	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-81041767-1	2.50574319560393	0	1.37547247793874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3322051-1	1.5761032572232	0	1.44353370982749	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30557266-1	3.92349730436431	-1.57298871489695	1.12250150643176	-1.4013243687282	0.161117097270523	0.871985906761603	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.82693517935851	0.683637474991079
Merged-chr18-4314769-2	2.86121466399913	0	1.34974882324134	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-110921988-1	1.33960926480095	0	1.53516071427863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-86890243-1	2.15516716207689	0.657897874369387	1.04028645464943	0.632419918022573	0.527112522073871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21213248741831	2.05529040810265
Merged-chr4-149901727-1	1.95810363080667	0	1.37709752546262	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31016367-1	2.31389861237945	0	1.44822797885714	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20025729-1	1.75896517146969	0	1.37565243684351	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-20006773-1	1.76207912919705	0	1.38550237129496	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-88540581-1	4.57472690217864	2.14202612108532	0.727301643129841	2.9451688186313	0.00322778494056978	0.0468509184199184	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11783078377328	2.70317705787455
Merged-chr6-119220514-2	3.03655868555591	0	1.33335455375363	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-90778529-1	1.82817115200933	0	1.34931103856275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166228581-2	2.68917091769664	0	1.35241692594291	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94621906-1	1.93877611717886	0	1.42621088643076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64794942-2	3.51078264053626	0	1.31236718815321	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41556752-1	2.6749948235639	0	1.37858830638371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-182909350-1	2.31017601146647	0	1.34497802335677	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-93576020-1	2.62270042796345	0	1.36190126788264	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-36175001-1	1.8490044314128	3.05262334685288	1.6840153949615	1.81270513083561	0.0698773127154814	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.47954504644696
Merged-chr1-191392698-1	4.79406670264537	1.40441627251167	0.806559408674374	1.74124343155318	0.0816409172282355	0.533224125656799	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52186958976732	2.6847444908354
Merged-chr1-155462715-1	2.09978256521008	0	1.35282487465468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-103411222-1	1.92407598119908	0	1.58940493580873	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-69250564-1	2.38054090064101	0	1.3629843659302	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37049187-1	1.08564937923984	0	1.61366337504742	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-144470587-1	1.22099571268182	0	1.46489298861401	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-94417941-1	2.13004693701711	0	1.49205460481355	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-98759193-1	1.71269333642783	0	1.44431907169678	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-119472405-1	1.95043681293353	0	1.38432302543581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17867817-1	2.53473526227409	-1.12664660688031	1.23287727195837	-0.913835166326559	0.360803465021598	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31079171885786	0.803125334851723
Merged-chr18-61232184-1	1.49096124257682	-0.428196553308395	1.47709814045339	-0.289890388174859	0.771900095175345	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52894300268921	1.61760369666849
Merged-chr17-66532499-1	0.855224322116392	0	1.9785048057908	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-133087474-1	1.77609433550818	0	1.57111252641512	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24751275-1	5.45945751956267	0	1.29750247418554	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-102806917-1	5.10886939585741	0.37641006240408	0.828608081429308	0.454267911260039	0.649636009008808	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.355387881005	2.55771059403982
Merged-chr7-30301082-1	7.39246171706957	1.25133917174242	0.633252856395653	1.97604978659677	0.0481491387072328	0.361193160138082	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97735817146205	3.72006568789831
Merged-chr4-139204440-1	3.07390369883202	1.27615949329947	1.00486990338413	1.26997483853552	0.204093592999682	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.930068803098547	1.52696130946871
Merged-chr1-180226668-1	2.26466593777969	0	1.4149517419437	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132776944-1	2.52467457444323	0	1.34947006184103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95442481-1	1.36064901620522	0	1.40245783211701	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34258651-1	1.69319850742172	0	1.42101131721859	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99217204-1	3.18569860489936	1.69016808859337	1.12300504757956	1.50504050915553	0.132313662293777	0.759913356909941	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.601731620840857	2.1935786047746
Merged-chr1-154787836-1	1.8975145470079	0	1.35795855530666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47534390-1	5.26022846992893	1.49354528121225	0.937347269250731	1.59337454773417	0.111076192031533	0.671388848810708	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05609478414788	3.448669955687
Merged-chr17-71256548-1	2.18337779228428	-1.72093502888444	1.17331816549143	-1.46672495108235	0.142450892530032	0.799082443453289	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74835691679777	0.581381506691384
Merged-chr9-90028041-1	6.10081384494853	1.53807337918242	0.839493276181572	1.83214496508934	0.0669298257183709	0.460087985629357	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00762729556446	3.44070193550272
Merged-chr9-24217923-1	1.19356720305007	0	1.82082228334011	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-42978293-1	3.92131050384676	-0.815499515218471	1.02605147790723	-0.794793957981319	0.426733366199367	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53420978032137	0.916190436775555
Merged-chr15-59077368-1	1.52514547286338	0	1.38949070145065	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27969965-1	1.18188454634749	0	1.50414621225657	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160317978-1	1.63091949750949	0	1.43174875927739	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-146655115-1	5.31164715360884	0	1.3021112442671	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-136961621-1	2.22630767534098	-0.822702136889829	1.04471087297017	-0.787492652920171	0.430993527651873	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.43536778169078	0.887107926668329
Merged-chr5-82457479-1	2.20999490244527	1.06674979922912	1.91563502006638	0.556864845367126	0.577619775092835	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.591094015117958	1.11548603074465
Merged-chr6-97282592-1	7.15532265816978	0.476113768750894	0.698155011716974	0.681959966999287	0.495264265034985	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55740075739814	2.56041795642383
Merged-chr11-83668315-1	2.69228539813481	0	1.41856451453532	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103282533-1	1.03610433020024	0	1.77775258328508	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-17728691-1	2.28240934201769	-0.862346184583415	1.04685617925304	-0.823748478228136	0.410082487792466	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30893735493454	1.31734301959449
Merged-chr15-79524264-1	1.56284034184979	0	1.48968532937327	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-127658658-1	2.42502420444836	3.79342677319111	1.48451796029446	2.55532561723852	0.010608850370899	0.11614105148882	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.0295486026821
Merged-chr15-31347233-1	0.860422586697153	0	1.74134769898894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-95921599-1	4.83349103016799	1.36531679073565	0.741075303268488	1.84234555478231	0.0654246202613141	0.452088985619239	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62553315142147	3.58000019006356
Merged-chr2-18205316-1	1.34170129967369	0	1.47796001744571	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-75437136-2	5.82781854398072	0.0880422621417458	0.611338622232653	0.144015540552974	0.88548819797747	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58573781888678	2.76501444179017
Merged-chr10-39246598-1	1.31277508574318	0	1.51941630459364	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75049414-1	2.93651646465484	-0.765313172970305	0.929880892320563	-0.823022797103002	0.410495029530139	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66007835154463	1.32852444445417
Merged-chr8-126539432-1	1.3775667164138	0	1.43588279927261	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60682430-1	1.09806275877619	0	1.66945569102402	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27897775-1	0.973602427864845	0	1.52983328115539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141531855-1	1.83467145836842	2.8317789635466	1.46710072110644	1.93018715266595	0.0535836528188878	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.54028618764495
Merged-chr8-88105630-1	1.15066877261154	0	1.75454613765448	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-4551219-2	2.89712596943692	0	1.33867862284102	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-119089490-1	2.34938742480596	0	1.40574986599211	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121419817-2	4.85760111008581	-0.00599178238026621	0.839746734579072	-0.00713522557878076	0.994306961979684	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40120466277349	1.41695929335733
Merged-chr19-40742072-1	2.16816376195953	0	1.37374706957885	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36208841-1	1.27189903448967	0	1.46175922931164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-42093356-1	1.61798918303968	0	1.41435979873121	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-42953107-1	2.50206827414511	3.45966492700162	2.14214508923403	1.61504696595444	0.106300524475434	0.650160433580282	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	2.00071484268282
Merged-chr13-113494936-1	1.92874456884416	0	1.39500492641564	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-23893350-1	1.84810649126928	3.06155725355421	1.3584288879096	2.25374863623922	0.0242119857623534	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.926147595614233
Merged-chr15-27520127-1	1.3297636839762	0	1.47189020855779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-57692281-1	4.21599912093633	-2.17879219340011	1.01819866309064	-2.13984978804293	0.032366908091132	0.271787198165396	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.47060393682897	1.29606516661881
Merged-chr19-6502162-1	2.00341846126872	0	1.38825394746025	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30673876-1	1.72441649938853	0	1.3783757116736	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-45974509-1	2.02292903367699	2.34877576092528	2.26785090499799	1.03568349918813	0.300349822903262	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.784712545784823	2.2679184501
Merged-chr16-21646195-1	1.88933054788745	0	1.40857436739779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-6284764-1	2.22323127919899	0	1.39372017073486	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-98772786-1	2.20731046870644	0	1.3601298716502	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-32816161-1	1.90654466609808	0	1.4104568272143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30095601-1	4.39195675878974	1.3411016018574	1.17564252183008	1.14073927827122	0.253978436056889	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.728176036732676	0.905469781553611
Merged-chr2-71633672-1	2.69064720250255	0.0373668149121597	1.11951123465225	0.0333777935902239	0.973373317941946	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98705030836031	1.87671264857868
Merged-chr8-36933333-1	4.85840670521627	0.734533173611071	1.02995756267094	0.713168386963671	0.475741565818949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.3966270056418	1.92839347452618
Merged-chr19-11810979-1	1.58527930930836	-2.15718987797746	1.31483822542708	-1.64065041330599	0.100870003698961	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31354852377938	0
Merged-chr6-124835386-1	1.23881734283469	0	1.59120714008301	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78605393-1	2.28993610402661	-3.55143323075917	1.42611078275557	-2.49029267130075	0.0127637940923573	0.133258170436041	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87614712820036	0
Merged-chr12-32001853-1	2.659056895579	3.32639453924394	1.38050625739931	2.40954687558637	0.0159723440870171	0.157164749570742	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.905469781553611
Merged-chr12-79725894-1	2.13364937749864	0	1.33879943629391	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-79820712-1	1.61034522680906	0	1.44905497566865	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-54423552-1	3.44873828121222	2.85361614338145	1.18889914631738	2.40021716915226	0.0163853475813432	0.160238988783366	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.03956264035389
Merged-chr6-120981770-1	2.87483227585897	-0.554985791593893	1.04093068639622	-0.533163061524583	0.593920709002842	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35228488865991	0.666688015277142
Merged-chr3-135669636-1	1.08021796780427	0	1.50347660560614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-35718260-1	0.94446629928026	0	1.61507739008773	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12438473-1	3.33339687731774	0.596897601760465	1.18397969207957	0.504145135050467	0.614159391675404	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62988963652637	2.52497320336197
Merged-chr8-68205591-1	1.89693827584695	0	1.40331447549103	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-77597836-1	1.93756923042905	0	1.4830842135289	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52034250-1	0.890353279183028	0	1.75413039207642	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-8511695-1	2.21659972545742	1.27834111123315	1.40650632521158	0.908876901809063	0.363415107556802	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr13-105022465-1	1.07091545626566	0	2.43837780606568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-66676746-1	1.61168731064721	0	1.4579010472547	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-125122751-1	2.21513011213536	1.38501506248957	1.32788088067817	1.04302658667863	0.296935979452472	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.659012160579651	1.24876900881727
Merged-chr16-33937781-1	1.69842277584329	0	1.57251375147695	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80172845-1	2.40432286880258	0	1.37567667679711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65864894-1	2.20546314482086	0	1.37564035991245	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-98747067-1	1.52951056574407	0	1.48672602981216	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-64414673-1	4.11992807628736	1.25685532045369	0.689342367991819	1.82326718741391	0.0682629334365383	0.46672474006104	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90459896890302	3.44100413654379
Merged-chr13-83131523-1	1.03225293590868	0	1.80372553173441	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-79118749-2	6.90184369859182	2.79082699749101	1.09251415300806	2.55449962804318	0.0106340543338611	0.116358492046297	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.42263049320002	2.41346904493103
Merged-chr11-76033553-1	2.30284658655634	0	1.41279288995498	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-83675771-2	3.07464296598741	0	1.3298347329439	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34465068-1	1.99900978820319	0	1.37564182628736	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-108692739-1	1.98251095128023	0	1.38573154861347	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-76230363-1	1.30490164091075	0	1.69592756576891	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76264594-1	2.54400745687015	1.37467010822122	1.11154345128447	1.2367218813018	0.216190352341758	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09935857912727	3.0389482955368
Merged-chr2-146650040-1	2.31072687499399	2.72184501035557	1.32131349667507	2.05995399063491	0.0394029394833841	0.313086634664545	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.18208293037817
Merged-chr17-50122716-1	1.41271073398308	0	1.40410758763592	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79130193-1	1.65265513966553	0	1.68049095989848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-94054128-1	1.73600655154009	0	1.53390421496979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-63375271-1	2.65723176436625	0	1.39350096828056	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-73033260-1	4.12105851288737	1.22574947292248	0.893713253415493	1.37152433203609	0.170211563772942	0.906712712668678	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8104028031962	2.75908667180769
Merged-chr3-138982464-1	2.69321593674923	1.81223545165525	0.904862740298905	2.00277386938997	0.0452015658168012	0.344499827369337	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19934448762808	2.37850366884776
Merged-chr5-134704346-2	2.4799555839495	0	1.33988413697295	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167050410-1	2.32502200835636	0	1.38661062716345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-11476327-1	1.51991818944776	0	1.51963189716081	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-162001500-1	4.39600148863575	0.75526415044709	1.11982712499796	0.674447094187388	0.500027110550483	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39563456100503	2.53995253633776
Merged-chr9-116102775-1	3.76982111057858	0.688250117904372	0.906575014323398	0.759176137694499	0.447747198443319	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05747536090198	1.99528851702169
Merged-chr11-19829854-1	1.74462315044532	-2.4560863288207	1.61704911734571	-1.51886934198525	0.128795387359828	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.930458768435973	0
Merged-chr16-20829173-1	1.4387401257465	0	1.48466873884302	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66914034-1	2.1561552860798	0	1.40763640388962	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-68199217-1	3.42049983622468	1.33928854160743	1.08535917199228	1.23395883700788	0.217218243197693	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49779547218927	2.36436284074327
Merged-chr11-83630775-1	1.75216928837474	0	1.41003938785518	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126910756-1	1.44213369533476	0	1.49182844181068	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-64178834-1	1.30925424846298	0	1.52623223741279	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-145593847-1	1.29606605394187	0	1.50461424162438	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24620012-1	1.68432891711066	1.80731819213899	1.73733751765243	1.04028041401023	0.298209640989114	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.42539729206526
Merged-chr2-71655964-1	5.41764644868992	0.837376195348327	0.655056520385947	1.27832663180722	0.201134281350761	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.74515314823375	3.09234664168005
Merged-chrX-169888378-2	2.07745630040277	0	1.37270380503193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-31881144-1	2.10333309476881	0	1.36608534651933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-24953514-1	2.00518655772504	0	1.41608368410153	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84050429-1	1.13347264713402	0.711837897235127	1.66832532075956	0.42667811150348	0.669613795444538	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	0.382164212378408
Merged-chr7-99071411-1	0.828646931657579	0	1.92364271824001	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-169804675-1	0.929099986168654	0	1.7303449327233	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94381397-1	1.6711753409822	0	1.55446614933194	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-91323813-1	2.50139101782026	5.23592780019983	1.44833464726335	3.61513674349584	0.000300189128563419	0.00748137253817895	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.97566325357712
Merged-chr10-22298303-1	1.77953325051637	0	1.38472966698531	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-33658986-1	1.95084568987908	0	1.37179573638778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157503151-1	1.66977460808739	0	1.46502332690855	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104228043-1	3.34223977300843	0.571282569141094	0.824501724304173	0.692882200608156	0.488383480720187	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60400740473201	3.26052545081215
Merged-chr9-120035393-1	3.87826797324069	2.20632642210601	1.17361624514134	1.87993854996469	0.0601164532552557	0.424321641220343	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.10447297862812	2.93240605911337
Merged-chr8-70844127-1	3.86315113211559	3.25889823940548	1.14133298063201	2.8553439659659	0.00429902413986438	0.0579344259524805	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.811331217015883	3.7265364221448
Merged-chr9-32636185-1	2.2020167822279	0	1.41839671940361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61664461-1	1.75296654397048	0	1.37284740118715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139075313-1	1.88792525820274	0	1.38282156889565	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31194068-1	1.45229945458558	0	1.49147786156679	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-13851870-1	2.47803592631536	0	1.4297355680343	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-77425931-1	1.91329622630235	0	1.43898747252695	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-103142478-1	2.14047972854678	1.7653225597277	1.16158319178393	1.51975559926669	0.128572412106809	0.74436899455405	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.600330816130669	1.61477032079243
Merged-chr4-12023893-1	2.31872393742557	0	1.45032476046623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-44408769-1	1.31346903288033	0	1.45117225022754	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-65943983-1	3.31296534805522	2.06436776867247	1.0121687527361	2.0395490011839	0.0413952659620174	0.32383754933006	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.499460501841977	1.94878297793229
Merged-chr9-62488811-1	1.79735659298106	0	1.45344298535334	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-78399847-1	1.54531607648844	0	1.38727054311166	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-72942787-1	2.86791386355113	0	1.38849477887769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-14622072-1	0.93273668275786	0	1.68064869210292	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115322266-1	2.67870539381765	-3.01415965013925	1.34188592662842	-2.24621153730447	0.0246904615924835	0.220623944102615	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08327832502453	0.306240821987646
Merged-chr11-49271470-1	1.92679592601711	0	1.36172845395828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44975455-1	2.02569887201241	0	1.41507874358999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-22062141-1	1.40144601707655	0	1.5503236495802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40728408-1	1.19330423086576	3.79141820598565	1.41703574463355	2.6755981423504	0.00745960291013005	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.89200393807192
Merged-chr3-127356577-1	3.21966476948675	1.93438979474868	1.11636335772898	1.73276002061177	0.0831383314981417	0.539928186252988	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.674898740693665	1.64536602019594
Merged-chr1-151690761-1	1.6864839604519	0	1.45530597801851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52944199-1	5.09347500657043	0	1.3055948114066	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111102609-1	1.14609885007098	0	1.73992059890318	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72317103-1	0.801007370113314	0	1.59027174495186	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10976816-1	2.6960111970494	0.0993627427356755	1.32425910168671	0.0750327051625447	0.940188690270796	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0
Merged-chr4-55617949-1	1.73650876489314	0.495830052503197	1.24848747541363	0.397144594773708	0.691260836395531	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.02516572835527	1.207189364431
Merged-chr17-67614599-1	1.5324425854559	0	1.55417705401606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-44359083-1	1.36473432185865	0	1.4989109107765	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-65845569-1	2.54153834362009	-0.842175562669979	1.25838419895179	-0.669251539689942	0.503335033992392	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.935892628934282	0.469435083901436
Merged-chr6-122720113-1	2.41744072526207	0	1.36519065742337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64281688-1	1.27816834262962	0	1.46920284682248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-54040779-1	2.27603233235837	0	1.3731694602488	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53717633-1	1.13072307947507	0	1.55302759078382	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139158498-1	4.30159635881665	0.503184328497139	0.861856709246871	0.58383757195189	0.559329597480907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.8697028492305	1.73531645649947
Merged-chr6-43261209-1	1.28208009517926	0	1.71975118282718	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102663642-1	2.07305181451371	0	1.39908418671877	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19549667-1	1.87996794001551	0	1.42414858909821	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-110672286-1	2.26263478686523	0	1.38936206732215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-55480642-1	5.5360425710018	-0.778556449248873	0.63105053587684	-1.23374659395079	0.217297345699307	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.84548911099367	2.05066483796074
Merged-chr17-5672796-1	1.46760141140681	0	1.46964632004153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-38669770-1	3.0818071694406	0	1.32967976237678	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-125622653-1	2.23532526222204	0	1.35892897154718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139168504-1	2.7448565226191	3.05683910483315	1.10726369188854	2.76071465832987	0.00576750423093349	0.0725333586363703	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.723496500504605	2.18738482224545
Merged-chr7-97799723-1	4.14371577798049	0.126294887547961	0.959692514526454	0.131599325446734	0.89530121910114	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13077606470193	1.6950503635711
Merged-chr6-17410975-1	4.20227375407688	-0.735721828263317	0.883182574427068	-0.833034810203982	0.404825097292749	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14670297221777	1.27663763006505
Merged-chr1-118553242-1	1.51284699039563	0	1.58985470705595	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-25562337-1	2.53278034644694	0	1.38683220958041	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-34269855-1	1.80328076035211	0	1.47633978877903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-56747479-1	2.56970064941461	0	1.33629095386247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-29676121-1	3.96371517536267	-0.298502914573512	0.897016765369939	-0.332772949288641	0.739305678926168	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90617409365008	1.35032549026822
Merged-chr1-176799063-1	1.51330294096118	0	1.56222508504984	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59776046-1	2.06203114592316	3.44900304091303	1.46797524566805	2.34949673101841	0.018798809180299	0.178602353110762	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.46928333126936
Merged-chr15-86236423-2	2.8507840197127	0	1.32551360147603	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49471558-1	2.17425492116513	0	1.3444951279607	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-57548756-1	3.1926953262172	0	1.34117714474293	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-40306328-1	2.39772180953481	0	1.3476031579865	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-82866972-1	1.41567208829556	0	1.43421858746246	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-172976778-1	4.74025526063424	-2.09683257236245	0.992992178565017	-2.11163050185612	0.0347181542381382	0.285334235548406	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44754421931671	0.73596151290311
Merged-chr3-11682199-1	4.27736643649358	3.28680360457777	1.06419561735495	3.08853330250232	0.00201147147934843	0.0325594330937847	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.913467560099968	3.79495071635813
Merged-chr3-122191264-1	2.66896072978585	0	1.32494744592689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-51783853-1	1.85750972448657	0	1.42188270394482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-90697984-1	2.06232827275229	1.60466211894952	1.18558371426681	1.35347854364032	0.17590280013341	0.929077301771566	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.384269922019302	1.15307255889252
Merged-chr1-77329809-1	2.30604365741963	0	1.33662333765821	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-112055313-1	1.80119107568938	3.8511860307936	2.33568131845445	1.64884909613525	0.0991785538563921	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.76071477186363
Merged-chr3-13712192-1	1.49780255962257	0	1.50749513078239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-133904735-1	2.1624724814438	1.95510766892608	1.56122954241395	1.25228713383371	0.210465255409866	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.609949614787909
Merged-chr15-58259410-1	1.73483715612689	0	1.41158704110458	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57100148-1	1.8388994781287	0	1.42296599860979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90445761-1	2.87851394045104	0	1.35422701390826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167382503-1	2.17447301419435	0	1.43855791247445	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-18098292-1	0.868992065443485	0	1.75723997602802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-110979818-1	2.84139536672919	2.14318231764842	1.33288424903874	1.60792830974937	0.107850880794879	0.656937328152702	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.869935478824964	2.3493545969995
Merged-chr13-73620875-1	1.65571552573569	0	1.42230799709569	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140162753-1	0.930216179700476	0	1.76897531159896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133382215-1	2.48383480083197	0	1.44089951785034	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16746109-1	4.22587316026277	0.774648485175302	0.835169689036672	0.927534242854074	0.353649221234366	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66230034531359	2.05402110133586
Merged-chr17-87242533-1	1.39241830675924	2.12904411869209	2.43659910755598	0.873776942661535	0.382239739479371	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	1.80641832399696
Merged-chr10-19124593-1	5.17625628868534	0.956389407561002	0.673107530427675	1.42085679379242	0.155358395874376	0.850469107548546	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73077038178996	3.62780606857785
Merged-chr14-88982134-1	2.45428477393612	1.15622396732653	1.16053363852452	0.996286474553661	0.319110973582705	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39632831439826	1.69469308021391
Merged-chr9-97307954-1	1.6465630277641	0	1.43641585748764	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127598700-1	4.34803255571406	3.79493597568989	1.03028660625735	3.68337892838915	0.000230162626193683	0.00607685130151612	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.54493961788419
Merged-chr18-34878599-1	1.59214376099432	0	1.57685231624181	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-16879435-1	4.55881117841422	0.283748258482624	0.745838042386851	0.380442190337415	0.703617201420108	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.44899475162138	2.59864907237737
Merged-chr4-141248042-1	1.91536454413956	0	1.39006225629805	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157691688-1	2.52970355212162	-2.4769400130745	1.18656569202698	-2.08748662608238	0.0368441687321221	0.297751552061495	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64185159260485	0.609949614787909
Merged-chr3-122739611-1	2.28149491249128	-2.50712964775066	1.10766016750663	-2.26344660690858	0.0236081724622743	0.213286276471695	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.65241231042161	0.563523181795778
Merged-chr16-52040185-1	1.68058472876981	0	1.47541534625388	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37342944-1	2.53204943181011	0	1.37422759459478	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-73132816-1	1.50681115770902	0	1.50138246176309	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-64077237-1	2.30318723686283	0	1.39643478790918	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-24704602-1	4.21739204603699	0.299837620085003	1.04172940848569	0.28782677885696	0.773479337814527	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27099349514517	1.69686753743604
Merged-chr6-134240584-1	1.78897948688837	0	1.48957800834312	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-40289263-1	1.28437910892079	0	1.52812390403248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-119813989-1	1.82530211874525	0	1.3737771797182	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-57574716-1	3.68258287254731	1.64443291737608	0.925750495258707	1.77632410222641	0.0756795128162767	0.504321422788833	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	1.58180101474665
Merged-chr7-44140637-1	0.945368598093528	0	1.6068332493253	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-126901907-1	1.66321284658049	0	1.42265010544268	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-47357538-1	5.06903281663403	-0.283661928129508	0.870905047106677	-0.325709363003338	0.744644259562959	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.34022290550119	2.99823733561444
Merged-chr19-5819742-1	2.60703986069049	0	1.33562557150971	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-12711910-1	1.33468138042277	0	1.45639122152635	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-14363313-1	4.82242259006051	1.94446555721431	0.672199558044287	2.89269091885686	0.00381956964940627	0.0531955665622553	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88393764261329	4.12145052561835
Merged-chr6-122969311-1	1.01531950394561	0	1.48902620833454	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-19515713-1	1.405515749566	0	1.39739581598993	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-68888900-1	1.47044669836954	0	1.41287803688663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-155051842-1	5.10872885012536	2.54319187624375	0.759365242357904	3.34910229542096	0.000810738564072957	0.0161519884780218	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25823687955429	3.33220783354933
Merged-chr12-25392071-1	2.9570680431472	-0.453156376812714	1.36865800505331	-0.331095405236068	0.740572422185801	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61339074125487	1.64290788048512
Merged-chr11-8575049-1	6.21214984420016	0.803224430459459	0.667803158152674	1.20278621125632	0.229059062034509	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45073931480725	2.34008614089274
Merged-chr16-32837011-1	1.28060493018899	2.49783235393366	1.52084610076946	1.64239652695292	0.100507854226012	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr8-10373253-1	0.780756252961619	0	1.68028002333579	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115247363-1	5.56998541237981	0.844555977274728	0.597839332604016	1.4126805166801	0.157749682762653	0.859312334929003	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28024517086404	3.26459343480996
Merged-chr11-20132434-1	3.77983026150786	-0.445968502129316	0.989881783923511	-0.450527031987262	0.652330467170318	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93861392693815	1.35032549026822
Merged-chrX-23709866-1	1.65192051248568	0	1.50647350479686	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-90110747-1	1.25118493435755	0	1.61587548147207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-87966371-1	3.74406675485291	0.579958150405198	1.14599109141916	0.506075618517238	0.612803565817647	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31103080271657	2.16448544747254
Merged-chr14-64656141-1	1.82652920011281	-1.77382719841983	1.16289231053689	-1.52535809407914	0.127169805038713	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22315256913809	0.918668513615376
Merged-chr6-128318566-1	2.17390979794315	0	1.38656817033902	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-46026640-1	1.19317329966566	0	1.73258873285888	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47718758-1	4.19029333033685	-1.79003690759183	0.798578563202625	-2.24152887401968	0.0249918373617151	0.222829390672484	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.52255603042058	1.354969417986
Merged-chr4-105718263-1	2.64914845590573	0	1.37908555981539	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127633353-1	1.9910656545086	0	1.39530889985514	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132551427-1	1.59973887594632	0	1.387644781497	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118455074-1	2.12305792698333	1.64581591376484	1.90559970207986	0.863673473483716	0.387767289638559	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.847480051707322	2.13737329513592
Merged-chr11-88183723-1	2.11635837282521	-1.99484022943897	1.36504443369323	-1.46137384263879	0.143912875069759	0.803903231382672	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01717308289722	0.735627456805112
Merged-chrX-77740971-1	2.96250209545726	0	1.36364938250039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-149940797-1	3.1445091241543	0	1.36382946374057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31720957-1	3.0092707301687	2.59645266233837	1.19234974488897	2.17759317135606	0.029436338390388	0.252632908912306	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702582693929287	2.47341853569617
Merged-chr10-8677454-1	1.44370591379429	0	1.44497259611323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-92493652-1	1.58784743030257	0	1.5227108524226	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-102526933-1	2.40869801667849	0	1.44033914970961	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-140531695-1	2.03148503969367	0	1.35078598673104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27000290-1	2.4882537744724	0	1.36296881519435	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-115175228-1	2.9562006924017	-2.71691685061236	1.25945438655476	-2.15721734714386	0.0309887334558458	0.263054010964627	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34909168084449	0.469435083901436
Merged-chr11-20083599-1	1.61751562891984	-0.441551241608311	2.28254713425066	-0.193446713534469	0.84660913416701	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69868772033628	0.961728545204858
Merged-chr13-111666270-1	4.38013990125193	0.393081163237878	0.97596771551761	0.402760416136721	0.687124483742588	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52025193491679	2.08628700317133
Merged-chr13-11907035-1	2.09578135226304	0	1.39153143962182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125293568-1	1.9957765043027	0.0478541422208887	1.13504673487386	0.0421605038370573	0.966370747918989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63300719002532	1.6342703608096
Merged-chr13-115130187-1	2.41921148862629	0	1.38670420747999	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17837519-1	2.33098865799069	0	1.33580546311711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-36363809-1	2.05958341701798	-0.012406670251206	1.40229858365829	-0.00884738128939682	0.992940903158935	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00572841130107	0.989878296978726
Merged-chr12-111745852-1	2.18890071755975	0	1.39916308639794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-33356959-1	0.939877414506374	0	1.73515957763971	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99126874-1	1.75978129745576	0	1.44686686078894	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-120359793-1	1.69426470111699	0	1.36934214430715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157838899-1	2.22317651903441	0	1.3835913659371	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-35655278-1	5.9690070105786	0.119026105803749	0.719413874433283	0.165448721568669	0.86859080776574	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75076852797855	2.53388634203561
Merged-chr4-139858861-1	1.60822856152456	0	1.40557614475946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-108632079-1	1.02993612997838	0	1.5286274889967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-48924057-2	2.43833235242845	0	1.35864778341142	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-151021023-1	2.49121095212558	0	1.35203494855396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-3743877-1	2.53607595378976	0	1.39183831953168	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52658669-2	3.92193239083956	0	1.35112850276462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-108873961-1	0.969344234754174	0	1.69704544985135	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-38441808-2	3.57149433258951	0	1.33487655581	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-86018412-2	3.31657857797486	0	1.39486063246135	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-60755473-1	2.27061010102887	1.85671551748252	1.92982956014651	0.962113730572951	0.335992477658846	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.733321818366247
Merged-chrX-23556543-1	1.61363549723612	0	1.45767059845164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43631875-1	4.27329639680259	-1.00054110746889	0.920108599108643	-1.08741632068015	0.276852861588015	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.41248429543366	1.40000983364339
Merged-chr7-81225197-1	1.42453305333365	0	1.55849355853805	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3793369-1	1.8267378577555	0	1.42173099889592	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52042727-1	1.47550705035938	0	1.37978729557004	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-148226645-1	2.26732149410689	-0.935835005738505	1.20453975600346	-0.776923302924854	0.437204021907411	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69637155184434	0.733321818366247
Merged-chr2-126030373-1	2.49940116746805	0	1.39454024372332	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-70863024-1	5.6824293847567	0.196033176936148	0.798477834636739	0.245508602033182	0.806062648494579	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9199595620272	1.95880986522228
Merged-chr13-86106581-1	2.1646750537677	1.11469793042496	2.01959071624818	0.551942490850698	0.580987755270151	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.07982873328226
Merged-chr4-124682455-1	1.74230958977235	0	1.43039759362878	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30430394-1	6.07332712841876	-0.145327460383406	0.871098597974851	-0.166832389262555	0.867501932877521	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45703855079991	1.69486619385668
Merged-chr15-60855258-1	3.20703740518967	0	1.35392684998232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-135996534-1	1.77047503620872	-2.72637031496818	1.41149710996459	-1.9315450918894	0.0534156786151293	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51552830775457	0
Merged-chr2-137645066-1	1.55282665020047	0	1.77372953882622	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-99468203-1	1.97603167422958	0	1.48425419364292	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-25538951-1	2.50763983664941	1.74360845548852	1.37417728144209	1.26883807426851	0.204498822448845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.727571417065705	1.66210910851734
Merged-chr16-91962664-1	1.65253624732475	0	1.48885538242936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93255511-1	3.11869170434559	-1.56107004823326	1.18614906003648	-1.31608252354493	0.188146346060063	0.975066312129498	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15127651637586	0.845523456341755
Merged-chr4-114092201-1	2.3921789173751	1.76700151030012	1.95896129838896	0.902009402510041	0.367051873026271	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	1.20539659680455
Merged-chr17-81544652-1	1.26372306029037	0	1.4077997974162	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72294714-1	2.07611869929506	0.303256334828693	1.15620708824852	0.262285483207063	0.793101353093539	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14473017376365	1.37038362634479
Merged-chr2-18987748-1	2.95643677135816	0	1.37827089990044	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-94343452-1	2.60869761552591	0	1.32975153214718	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-37473526-1	1.47150220002735	0	1.43058728457106	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-189868270-2	2.28917667830552	0	1.40542850760903	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62120963-1	2.42318942565898	0	1.38173307604287	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103210530-1	2.10964457514276	0	1.44804512016609	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127459112-1	4.79006489878545	3.36651667501361	1.02289863984755	3.29115373104353	0.000997773702436963	0.0189978206175541	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.86914304741896	3.75745726092843
Merged-chr7-81851838-1	4.31801963036158	-0.262430310193435	0.883951444727047	-0.296883173571225	0.766555702872106	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93968435801696	1.30806904914164
Merged-chr6-89268443-1	1.22130646531396	0	1.44900062456814	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52034584-1	2.09888962773216	0	1.38717463784874	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124425186-1	1.80432452458442	0	1.46363075261979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130360117-1	2.82132120625047	1.01092586772862	0.878386393905589	1.15088971635104	0.249777608998464	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88894029472597	2.20411427276889
Merged-chr6-33682063-1	0.983884125695116	0	1.6047610408983	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30693870-1	2.00187800259896	0	1.38051746023083	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96042970-1	1.30165149137256	0	1.85910132478524	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-67016706-1	0.706144087247913	0	1.71263037526077	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-105562650-1	1.86092812770841	0	1.40758226579114	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119847785-1	1.1351348743632	0	1.5729995089809	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-138605316-1	1.06681721662308	0	1.62243861926637	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-45473025-1	1.25748907996438	0	1.48116509353244	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88145795-1	0.613961501915366	0	2.43324850456545	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-95072191-1	1.18789611955257	0	1.61348762331494	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-123018595-1	1.48455706963128	0	1.39562687633306	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62328590-1	1.96452086282381	0	1.47920010098789	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-85378055-1	2.18060360957663	0	1.4215916201345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172470884-1	2.15282824381452	0.152819644602054	1.59328092650807	0.0959150656105467	0.923588029120817	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.18548116023368	0.961728545204858
Merged-chr2-15029162-1	1.93340752390689	0	1.43534435027165	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-76592675-1	1.76852178798051	-1.49019428385028	1.34483790082073	-1.10808468659371	0.267825243748952	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.03708918505115	0.306240821987646
Merged-chr15-84889587-1	2.39759993680155	0	1.48008662028104	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92772182-1	3.02418975954237	-0.873448033848467	1.07862645524994	-0.809778055783058	0.41806774693849	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91439768738912	1.26501898168246
Merged-chr4-59406175-1	1.97011546382572	0	1.36101825601207	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40496489-1	2.37927546264801	-1.5365133171244	1.12494665059473	-1.36585438634986	0.171984672013694	0.914369081230727	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04608827501261	0.666688015277142
Merged-chr15-84622593-1	2.50401365080341	1.13197905082517	1.23403494754785	0.917299022263939	0.358985969592035	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.797562664687189	0.887107926668329
Merged-chr13-19833211-1	2.99311370788957	1.49540142410972	0.890173441804326	1.67989894315274	0.0929769794754366	0.586624862489319	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44907447716444	2.43049365066179
Merged-chr2-49359009-1	2.24501028594218	0	1.37226500043966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-70174763-1	0.967671047745406	0	1.95457803589674	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67451062-1	5.15730995358355	1.04489367786552	0.818385245546848	1.27677482402229	0.201681756254513	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85252089902538	2.58303346135974
Merged-chr16-39466695-1	3.39566144227137	0.784894561637213	1.15312719213391	0.680666076553732	0.496082806210188	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.866220529060937	1.68807364458303
Merged-chr17-67203429-1	0.950788827041218	-1.86196034932891	1.31363260886841	-1.41741331385861	0.15636212236708	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.59915473264803	0.469435083901436
Merged-chr15-75019699-1	1.79739194471741	0	1.48633064515476	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-49962425-1	1.68318685358974	0	1.40126584461551	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-99094097-1	2.98870552626514	0	1.33104109722586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45837672-1	1.44354460020693	0	1.53944402550847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52624994-1	1.29705528175984	0	1.56415837598314	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-52973476-1	1.18172764584276	0	1.48325732011078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91080330-1	5.09506565544053	-0.60550994408321	0.883337829751859	-0.685479466279968	0.493041413655907	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32615580554487	1.29358708977899
Merged-chr4-105071197-1	4.58389548883105	1.55955235048328	0.803770659428624	1.94029519762754	0.0523438246846832	0.383041458739148	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.40153969583687	2.36453465698696
Merged-chr7-97311692-1	1.92503099335197	0	1.47275922650766	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-61198706-1	3.59473618552607	2.6855670113083	1.28397781021614	2.09159923944186	0.0364743806298596	0.295412460182247	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	2.06559681884521
Merged-chr8-11113057-1	1.56028423110601	0	1.52270186783905	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86192075-1	4.09696136219843	0	1.35626176137333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-62127917-1	2.61620082964356	0	1.33964620616818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-52056393-1	1.65049851782305	0	1.43968135813377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145987351-1	0.961633742073374	0	1.5816248841237	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-32170785-1	4.43700030094558	0	1.34261453482052	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-102605163-1	0.922845430294326	0	1.57205000250182	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88546735-1	1.22738106902994	0	1.8101768481691	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95841545-1	1.5798311207133	0	1.46986733404989	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46871272-1	1.23052950535379	0	1.51636639766858	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-53194281-1	1.29483956138393	0	1.56398412375801	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105267309-1	2.39470354710105	-0.38032863117671	1.00925818967569	-0.376839777043498	0.706292678379906	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88949029244226	1.81534621159246
Merged-chr16-64819284-1	1.80109560614979	0	1.41901575516525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58299693-1	1.70160261685175	0	1.3920597569568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-25645684-1	3.66907802795188	1.84541487836229	0.792785104716771	2.32776179494642	0.0199247558001686	0.186747431514317	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.63904600296216	3.27127412584984
Merged-chr4-84837098-1	1.56827382701001	0	1.41448803543903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-27605872-1	1.47791456202779	0	1.39679758020401	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173678763-1	1.28506741327124	0	1.56288359416022	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192756787-1	2.62115140693375	-1.36645643471016	1.41692949720752	-0.964378564637953	0.334856164946624	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61414217588685	0.581381506691384
Merged-chr1-128463749-1	2.77703943080316	1.65070295280633	0.987325134701193	1.67189398384546	0.0945452293392605	0.594453243183231	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.732715880459263	2.08628700317133
Merged-chr2-11508747-2	2.63892791084696	0	1.35772293619483	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77032592-2	5.30761822364756	0.93775070991646	0.734896092132674	1.27603170020281	0.201944313384636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54391558836075	2.24910369072486
Merged-chr8-124743079-1	4.00780825509532	-0.772223073767536	1.07586518590892	-0.717769367279174	0.472899504081676	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.0236922695349	1.64500873683875
Merged-chr6-51939272-1	1.66323307643069	0	1.3736775845881	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-41281207-2	4.78239465841018	1.16102827052517	0.844820367155791	1.37429010433773	0.169351637202062	0.903499036597263	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26191403659136	2.05066483796074
Merged-chr4-57902848-1	2.09931065092308	0	1.35763507357266	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-49111506-1	0.993146475339469	0	1.47020441432408	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43761348-1	2.51169758005093	-3.11702013331229	1.24626905961214	-2.50108121458329	0.0123814781321217	0.130407296287863	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14261180998872	0
Merged-chr4-138553010-1	2.09410390716346	-1.41364718648805	2.13398786672108	-0.66244387258872	0.50768679451244	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.576613669504516	0
Merged-chr10-124399130-1	3.36868899801384	2.0124059515699	1.04479860348355	1.92611853122715	0.0540895752398027	0.392391086108303	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769509957131354	2.0295486026821
Merged-chr13-23724968-1	1.98100432443375	1.1249189828316	1.14365642479173	0.983616196653168	0.325304258442605	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.856023420615499	1.41959898789419
Merged-chr17-5422002-1	2.27805937567709	0	1.43801964094688	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-93293204-1	2.64009773600831	0	1.39381046016263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-30112648-1	1.95481093357969	0	1.39997749531604	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-42118788-1	2.03894011795025	-3.73000020294577	1.57751433532416	-2.36447943414682	0.0180554297898831	0.173125475429156	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95902012156952	0
Merged-chr6-129316741-1	3.33564064137236	-3.64035087697045	1.09825980832857	-3.31465364512487	0.000917567383580309	0.0178397376517224	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.12815328477099	0.420961122473315
Merged-chr14-50968655-1	4.81342837511906	-0.618736461335138	0.739251001292336	-0.83697750865874	0.402605210536275	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15238449920171	1.68807364458303
Merged-chr7-63755174-1	1.16397218285827	0	1.50950773656775	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131977955-1	0.892298059468585	0	1.67415710825781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137819860-1	3.14187371508457	4.34978300602767	1.35188461705136	3.21756971798017	0.00129281603009653	0.023196143960101	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.11349282353426
Merged-chr1-85800006-1	1.33445072416504	0	1.48063162245973	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-57375333-1	1.44675562870168	0	1.40217150718175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-12095389-1	1.62498539812574	0	1.58035116086989	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-55152243-1	1.70068113371922	0	1.46622807339275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-39301487-1	1.96848858088556	-1.55385015032807	1.25717341051206	-1.23598712582949	0.216463349171683	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48502376188194	0.843323834477631
Merged-chr3-108788322-1	2.25719480399789	0	1.38904568497563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-65167065-1	1.84219829581868	0	1.41006301858678	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-78613766-1	3.35537183025918	1.92218920692056	1.19494788113633	1.60859669050391	0.107704558374561	0.656168382579162	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2696692236857	2.3257008870488
Merged-chr9-25104824-1	2.14213804432409	0	1.35729249178786	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-53786532-1	2.78371861662136	0	1.34298490807599	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38281071-1	4.79814559768278	3.24498235126096	1.00875035712305	3.21683390577984	0.00129613611392674	0.0232365735255575	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892417252654248	4.1327297878542
Merged-chr16-4458166-1	1.96986815168537	0	1.45603192964462	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10606323-1	1.58875249183336	0	1.50004895217091	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-15536444-1	1.59224078960982	0	1.37851895021525	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121781986-1	2.22702020466913	0	1.3780961331045	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132828186-1	1.92720047078667	0	1.48165596302452	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-102045327-1	1.2771339681918	0	1.42049056431514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-27596572-1	1.36166369963484	2.49514742642901	1.60949681402275	1.55026552689637	0.121077797882911	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.20275690226768
Merged-chr16-30184997-1	1.05262563535045	0	1.51492436227368	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-126683268-1	3.13089394044423	0	1.33532756854157	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167702394-1	1.67594242967736	0	1.50261801506227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-75489837-1	1.98956630502855	0	1.43074538253561	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-45586607-2	2.63357170036894	0	1.39806711198978	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30447892-1	1.63481876315514	0	1.41916804801585	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11012922-1	1.7759720819472	0	1.38160510641168	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-84912456-1	1.81675255374654	3.53255701153146	2.06611751728527	1.70975609178949	0.087310985538334	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	2.1603440843445
Merged-chr14-120521047-1	0.912068514081941	0	1.73865991471019	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134721246-1	1.28995643061646	3.03349424420013	1.36577294868384	2.22108238937038	0.0263453815913779	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.15307255889252
Merged-chr11-31820817-1	2.63701856733087	1.19071462826822	0.876253804432942	1.35886956752077	0.174187923823978	0.923078750320467	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.52573870141986	2.19193974227778
Merged-chr3-10211964-1	0.917946544902126	0	2.00402684034183	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-94758165-1	2.3070302992153	0	1.37026102668396	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-39768411-1	1.67704870564655	0	1.4066071638185	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-45058297-1	1.94825358905668	0	1.36722274052212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134399953-1	4.18881568987368	2.75813988675678	1.12545380158544	2.45069134145833	0.0142582159178283	0.144429914333655	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.911455188998607	3.3383215370264
Merged-chr4-118143917-1	1.40774521034343	0	1.41732495796531	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-38845986-1	1.28948688157396	0	1.55746231365481	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26559098-1	1.61603613727828	0	1.51556895008563	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-46151831-1	1.14862920486328	3.12060345229533	1.45941762851169	2.13825254082871	0.0324962521556731	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	1.775524153257
Merged-chr13-77044579-1	2.76930111175055	0.689620533851494	0.965745018193317	0.714081378479811	0.475176859965649	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.43714491638244	2.24287124256397
Merged-chr16-44962117-1	1.98568029408501	0	1.43021160681017	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173773615-1	1.0157840617329	0	1.77239181188227	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134638093-1	1.61331975067859	0	1.42875545004419	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-23522800-1	1.28754938145499	0	1.67325799200979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-59299906-1	2.34888801311049	0.537629522836274	2.45132629512173	0.219321892767268	0.826399309068735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14243070658662	1.0995156753045
Merged-chr11-73006575-1	2.77702397776255	0	1.40630101170057	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34596694-1	2.12338680913575	-2.64674102121629	1.27580602913848	-2.07456381359443	0.038026978774698	0.304560724967694	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23839205993914	0.382164212378408
Merged-chr6-67059097-1	1.18899004578816	0	1.77341310306949	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-33993060-1	6.14245478674133	1.6508443173015	0.874409576184436	1.88795315406438	0.0590322397183058	0.418840470861282	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34001673940221	4.30746937643262
Merged-chr13-6102492-1	1.51118682141928	0	2.41281028811033	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-130196593-1	2.04781924340076	0	1.34781688954773	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-38726235-1	3.06012826159033	0	1.37030693431804	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-21268344-1	5.99297886550388	0.465735108776702	0.560007338470792	0.831658938699769	0.40560148389429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.37450325034619	3.63855117189402
Merged-chr10-116849012-1	2.06020604463097	0	1.35316514068325	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-75051300-1	5.83988084165724	1.77397417220631	0.701248636560527	2.52973635842955	0.0114148262225144	0.122610173021288	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.13873194586452	3.74214509909115
Merged-chr8-119676594-1	2.24416543967143	0	1.38372776439578	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-156535879-1	3.0531075147285	-0.209627704114177	1.15136796294061	-0.182068383750043	0.855529060115941	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01085107165899	1.3480509837169
Merged-chr8-122889573-1	2.73098257993292	2.08056406031593	1.13914271814227	1.82642967134877	0.0677855658688134	0.464510895713765	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.531725110705892	2.21043983090998
Merged-chr3-69214829-1	2.6188013640113	-0.593222724553081	1.26546885036877	-0.468777026301523	0.639229022865663	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27979874364766	0.683637474991079
Merged-chr9-16267523-1	1.74816673637817	0	1.49584408138239	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-54013366-1	1.55167538285767	0	1.48413501933845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45472881-1	1.37171973461751	0	1.5718623372105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-46146622-1	2.28554939936219	-0.519837135320952	1.14940956201511	-0.452264495180979	0.651078450491572	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10468960789412	1.73801320314375
Merged-chr6-32610361-1	3.32163608217445	2.47066381294595	1.22921824300554	2.0099472384212	0.0444367733589817	0.34105771575241	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641446327055861	1.0995156753045
Merged-chr6-100192866-1	0.833295843361478	0	1.60777132351008	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25231125-1	1.97159668718917	-1.43944323293738	1.47947643849353	-0.97294096444218	0.330582643889515	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.698692521858	1.08186277552917
Merged-chr7-49074624-1	1.16267884903608	0	1.44596440240099	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-53816118-1	1.50346241454098	0	1.46744092731377	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134347265-1	3.30768863830404	-0.237949112249366	1.06233177289257	-0.22398756991092	0.822766975301614	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.38543991729881	2.35950768455674
Merged-chr4-59416597-1	5.04946253715283	0	1.31720946267234	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139300730-1	4.6041735492486	2.3794537140235	0.88947328782835	2.67512666943933	0.00747010199765198	0.088207677112137	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23864589957307	3.69817054966362
Merged-chr8-125375332-1	5.96019748710379	-0.377731135151811	0.596679778670387	-0.633055029941737	0.526697707539254	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.58223556761264	2.74833268732204
Merged-chr8-41191638-1	3.85592430161575	-1.18587328433139	0.934606536895466	-1.26884762465987	0.204495415525319	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01414009823436	0.825079211029734
Merged-chr15-73134704-1	1.72630292434576	0	1.42552742429757	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-50705022-1	1.15664885009534	0	1.80726885125696	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-88828414-1	2.10373455324052	0	1.35866164387662	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131217487-1	2.36971496580919	3.06209492833641	1.55930776870085	1.96375275606278	0.0495587713032293	0.368342523837673	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	1.47711801254374
Merged-chr5-113805499-1	1.17905109957877	0	2.40998339039147	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-157031016-3	3.8275823549218	0	1.3149709652221	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-153480573-2	2.54694101227887	0	1.36255119683192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-128400854-2	2.06587244414053	0	1.39318486900824	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104001245-2	3.10158971138695	0	1.36219319239738	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-92413180-1	1.61762768605272	0	1.38528581025366	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-49393571-1	1.58224882453014	0	1.38815367087697	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-48532492-1	5.79836995774133	1.08738368456097	0.736107057898669	1.47720861102063	0.139619726259407	0.787806807024196	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.90270997862126	3.11933673955518
Merged-chr6-136945622-1	3.61438537735373	0.895029962358471	1.19659393440127	0.747981363290388	0.45447139886948	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58499890165656	1.60340856582165
Merged-chr11-119404824-1	2.74825581133894	3.71705069182574	1.26088128584935	2.9479783176589	0.00319859498268251	0.0465616813852465	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.56112970471021
Merged-chr4-144974651-1	2.48879097907526	0	1.42006256074076	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-131100925-1	5.66989921682378	-0.423778587166235	0.728572442868157	-0.581656074580523	0.560798364219018	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.94650916883488	2.4360226934973
Merged-chr10-59921071-1	1.38002184636587	0	1.46634856823671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-124448627-1	1.63904696467828	0	1.47028637681098	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-49042521-1	4.37827892450138	1.90669714634842	1.08665766119739	1.75464381693811	0.0793202516423888	0.521931319013228	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.69112517750379	2.8367926637908
Merged-chr8-25070709-1	4.85385179183932	-0.469156646020635	0.761541492880774	-0.616061830388126	0.537853712675027	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79721011887487	2.15258675016244
Merged-chr3-65435047-1	2.00686514906023	-3.48173493311621	1.39046474248575	-2.50400806775717	0.0122795234106023	0.129694154968356	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72800816024086	0
Merged-chr2-142761293-1	2.20084516212482	0	1.41167161565704	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32835906-1	1.85656259158611	0	1.41789918152335	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39304348-1	2.1185184112559	0	1.38905663709851	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-25415283-1	2.75394417514143	-2.26558971451898	1.00561444840733	-2.25294069522089	0.0242628885009567	0.217696376765552	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.55330598301824	0.869764003783424
Merged-chr14-9638212-1	2.35631467441983	0	1.36836157473681	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-50154992-1	1.52123570326082	0	1.38807580788254	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-47895752-1	2.26502449392542	0.219594154024788	1.50795358151451	0.145623948055642	0.884218261700798	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.33887295575155	2.24953473907626
Merged-chr17-6153782-1	1.79149687932955	-2.916134485585	1.36191073415045	-2.14120823961642	0.0322572488801925	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.673623451315	0
Merged-chr1-173935054-1	2.97791497922316	-0.195402314206322	0.94345839129097	-0.20711280540835	0.835921761650816	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14745464498185	1.45547307112966
Merged-chr7-122207498-1	2.10733307108695	0	1.45569610165479	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-25894132-2	2.9254009839194	0	1.34248670930237	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-25535407-1	1.05513736229468	0	2.43325629978303	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-103007774-1	1.75384487249419	0	1.4238785900992	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74792432-1	1.02389277323257	0	1.80701070342518	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-31765878-1	1.14647603697237	-1.19341217002062	1.93513612269969	-0.616707091569195	0.537427942842317	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04930736055971	0.469435083901436
Merged-chr13-10344588-1	1.29408879393869	0	1.40421315576217	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-55191902-1	1.25107754395198	0	1.48750238033152	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-132516460-1	1.79529339809356	0	1.441870229345	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37046433-1	2.56126925364377	0	1.33662437196499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-74009651-1	2.31790571926133	0	1.39927964712664	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-80413968-1	1.02319337743848	0	1.78752410692164	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86146438-1	3.03494017497633	0	1.37109523904273	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-58317589-1	2.02564025878065	-3.39579348280125	1.41729098546517	-2.39597479813697	0.016576230000182	0.161887658883858	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98494101807612	0.306240821987646
Merged-chr6-89415394-1	1.08607277117479	0	1.8711705643222	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5814323-1	2.14524820880215	0	1.36432933580077	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-11297897-1	2.18951472511677	0	1.45060676376901	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66242095-1	2.49116500388555	-0.524016856768601	1.16707199505254	-0.449001311821394	0.653430710323057	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.9904149686335	0.563523181795778
Merged-chr11-70597491-1	3.36427730333188	1.06599208228987	1.08890006565934	0.978962272028515	0.327598621344036	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.705103018524376	1.59652745948425
Merged-chr19-36840528-1	1.57733650937882	0	1.53152618733844	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-106093324-1	2.06512196223338	0	1.45990791252832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-100507834-1	3.36364723334304	4.42588712890768	1.15595071875652	3.82878530813899	0.000128777282736523	0.00386900244491991	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	2.44662439339204
Merged-chr2-112401986-1	1.6490457929975	0	1.52742051261032	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-40600595-1	1.36842970774552	0	1.5124915296401	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-46606687-1	0.993178348909976	0	1.50457455709457	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-59194164-1	1.54433965586832	0	1.43889553471709	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-69234332-1	1.43198660392002	0	1.5557543219376	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92962758-1	2.40638797644747	1.46950008632482	1.29816654253981	1.13198117357871	0.257642349485962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.733321818366247
Merged-chr8-94093536-1	2.37612272991845	0	1.42387712161579	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-80210567-1	3.72431447085448	3.59653981686599	1.26030968078672	2.85369530338045	0.00432139564302225	0.0581519603972264	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.432516808061283	2.52589952658819
Merged-chr15-27643129-1	2.25737526326805	0	1.35441742630954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-68612047-1	2.14087265894462	0	1.41628031035818	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-111799313-1	3.3265276077502	0.382924857915468	1.1051231253183	0.346499724006027	0.728967191590359	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.51988219047703	1.57664565284388
Merged-chr17-81591854-1	2.3998261019375	0	1.37291997152174	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-128824400-1	2.19001076563307	0	1.36106269370693	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-64618834-1	1.90220587019163	0	1.38715269835663	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132736253-1	1.77341241313755	0	1.41284366756702	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-106328977-1	3.99813774266487	1.58361546387923	1.07078657882942	1.47892726262075	0.139159756066586	0.786229761363231	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49374901845364	3.37307834666163
Merged-chr3-142588110-1	0.93078264257098	0	1.4978011160189	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158116255-1	1.94116784072031	0	1.40740935973937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-118865169-1	2.0901661461713	0	1.3807439154723	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-7774211-1	2.29305654023636	0	1.34284295322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103371921-1	2.09671929856134	0	1.47414732967684	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-181255876-1	1.91988307490142	0	1.44593488138898	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143922591-1	1.00290651008293	0	1.58704790236159	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-179648693-1	2.84617236985234	1.77302946071804	1.02104110861303	1.73649174921713	0.0824769219934105	0.536859940689451	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.2466233237127	2.27668708544805
Merged-chr17-26235254-2	6.29811240473138	0.062668636296097	0.554205791642207	0.113078277493996	0.909968496567763	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09781136629098	2.86829497697038
Merged-chr13-28860408-1	0.738273410985933	0	1.93182544519732	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-42055007-1	2.88313894356685	1.23016504047439	1.70987367769347	0.719447908066414	0.471864987506507	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37460928326921	2.8185216861781
Merged-chr13-47173382-1	2.2326444782682	0	1.36046465393954	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-87085242-1	1.16110962924732	0	1.49218522645873	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-59237957-1	1.57352847494099	0.167280483509411	1.33354040048346	0.125440881617659	0.900174524849101	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02830827746406	1.95160684218358
Merged-chr4-81105171-1	2.41565721259278	2.49624325490399	1.48151627515595	1.68492462537492	0.0920031147998939	0.582063012593905	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.820694648535198	2.18950583898258
Merged-chr11-118534902-1	2.20248851044785	0	1.39906271435217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-95281925-1	1.63422604315821	0	1.4522151030541	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118802037-1	2.22447455013787	0	1.35051569875586	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-26747604-1	1.75177570379369	0	1.50477247659493	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130661663-1	2.19564846666887	0	1.43642656591114	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-69924206-1	2.60772023849268	0	1.33324240471644	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-29681864-1	1.56537494921232	0	1.59075482941096	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-4236432-2	3.23106174622976	0	1.33573558715538	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-133632672-2	2.01895054011433	0	1.36003437131966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-92635854-1	2.28866492968665	0	1.44798667916028	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-86768010-2	2.73881435904425	0	1.36670074800667	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82987968-1	1.59497227904913	0	1.4837619914902	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157502783-1	4.95906164235412	0.856958598782483	0.854997548330091	1.00229363283698	0.31620179681098	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.4777415909556	1.77110564661746
Merged-chr3-138223191-1	3.44912062467262	0.80304760629435	0.949318612436786	0.845920005964093	0.397597371160504	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.44711743573346	1.84231959469675
Merged-chr16-16535464-1	1.70628854831929	0	1.41171341213502	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123580873-1	1.42801117080536	0	1.43734391224863	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139364410-1	7.20968090651442	0	1.29587670560632	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103208591-1	1.51516019423771	-0.43527966044395	1.45075914032386	-0.300035787020291	0.764149858301653	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.458518048558889	0
Merged-chr9-35103653-1	2.10386289473695	0	1.4120908048522	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-34957280-1	1.28011395796734	0	1.7065585581371	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-134067260-2	2.71091941315654	0	1.41085924494265	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-39102343-1	4.07698170187479	1.83869018193324	0.843268597469675	2.18043241198645	0.029225423762403	0.251086581800945	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58227521047201	2.09717297272874
Merged-chr10-37235704-1	2.31659711786133	0	1.3390582571888	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-5429243-1	1.96602597046012	0	1.42133412312018	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112913961-1	1.24018222725924	0	1.482322395102	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-35482446-1	1.2393433470623	0	1.51380105948828	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10921775-1	4.76610274146139	1.87263712369001	0.89088319597316	2.10200072484746	0.0355532123087555	0.290552802842413	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0853949393914	2.55833441760924
Merged-chr3-83881796-1	2.03383570385378	-3.61188724363008	1.20135096678108	-3.00652127771439	0.0026425555896145	0.0402800180916606	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48879226953929	0
Merged-chr11-53785479-1	1.61686196067993	0	1.40008236691731	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129788326-1	3.50911993476278	0.362336246691037	0.799143685393778	0.45340563069393	0.650256682655949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01913647567939	2.28083073713509
Merged-chr18-5187351-1	1.06505642418203	0	1.65038332449954	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-72145407-1	2.16538801247814	1.27911973725287	1.22047402933604	1.04805158201419	0.294614842148918	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.62531311065708	2.63732062367281
Merged-chr5-143312079-1	1.79046882911129	0	1.36576267228025	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-90543300-1	11.7952432487594	0	1.33012644155	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-69241845-1	1.71605409022317	0	1.44938471079207	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167793887-1	2.66830114906962	0	1.34559579742132	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120815869-1	1.38298797055042	-1.72821842765017	1.2335647916086	-1.40099526138107	0.161215490128379	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.47660948054693	0.683637474991079
Merged-chr5-49472768-2	5.27138015912669	1.65495093944348	0.751741150749979	2.20149041700379	0.0277013243666764	0.240970546068269	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32064508794532	3.0451916841249
Merged-chr12-35897646-1	4.7913810452525	2.21991172741283	1.06388506341814	2.08660860439239	0.0369235288682423	0.297955726433304	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04764447411144	3.59147400027056
Merged-chr4-106875800-1	1.76563504862923	0	1.43758501517788	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57583653-1	2.21838654671154	0	1.39883758371497	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-91545600-1	1.93740197304782	-0.312113887531064	2.20112076572702	-0.141797711598062	0.887239791685562	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	0
Merged-chr16-36942183-1	1.65337738238214	0	1.53913360950171	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-162531142-1	1.83540980485505	0	1.41952222374624	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-40358337-1	1.87648138295767	0	1.45765035072958	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-45440283-1	6.37196421071801	-0.915924488085626	0.653788554935006	-1.40094910070226	0.161229294363654	0.87252086703829	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09346959887639	1.628416560482
Merged-chr3-138454446-1	1.34515473124048	0	1.51376764330811	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-41708526-1	2.45404704180453	0	1.35187396749456	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-142665259-1	1.7919817492475	0	1.39082619654576	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-63066177-1	2.21794226740683	0	1.35530262050815	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-10565693-1	2.07321436852822	0	1.47520736168823	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-61913128-1	2.03246675101986	0	1.42302961081198	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-105152115-1	2.56205699373146	0	1.370227130675	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42840789-1	3.36549967972069	0.992110466880171	0.811734914189139	1.22220992289239	0.221628252367042	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93025592935513	2.93666388734499
Merged-chr2-124670097-1	0.921436149770015	0	1.57589443473976	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-40985047-1	3.6266970336893	3.14442960505515	1.16995137074561	2.68765837938306	0.00719549699213057	0.0856772861603069	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.33086707361887
Merged-chr11-54127091-1	1.43641138365772	0	1.61987576702203	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-10721698-1	1.64363473797529	0	1.67776312166231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-5195363-1	1.94660960568121	0	1.38780560851133	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-130967086-1	1.09776855334194	0	1.54924967535053	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-117018827-1	4.16711919147146	0.632102122859676	1.02412474378975	0.617212040518227	0.537094874926412	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.904678204351698	0.989878296978726
Merged-chr1-152617140-1	3.1889112538271	0	1.35584474260674	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-80963056-1	1.2863212655567	-1.47412490644264	1.48498802206472	-0.992684711620112	0.320863627692789	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.73348252654836	0.683637474991079
Merged-chr10-12017479-1	1.03445752594807	0	1.58765565014363	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-49562758-1	2.22387056095846	1.05096860488239	1.5668355398668	0.670758722368357	0.502374247157353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.785546222710947	1.58492111464609
Merged-chr4-43924902-1	2.2247214227388	0	1.37262986989916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-85186977-1	1.51657329580782	0	1.42396914974845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-145306393-1	17.8543160512099	1.17434142043906	0.36297734730821	3.23530222794292	0.00121514034002289	0.0220629510028163	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.69116954570904	4.82853118669401
Merged-chr6-29276706-1	1.59066726137015	0	1.59748676065078	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-48578423-1	1.9344800594339	1.82432073622758	2.05822744232026	0.88635526799264	0.375426115685878	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.61041440076871	1.58458601743443
Merged-chr13-101541993-1	1.57864661125497	0.0991809631761888	1.51226258939788	0.0655844850434862	0.947708641658317	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	0
Merged-chr7-19256729-1	1.72948571602869	0	1.39552948668519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-65740011-1	4.71977010630782	-0.461351494966066	0.64458133978378	-0.715738210977101	0.474153011810602	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.18669316437338	2.36481291013395
Merged-chr12-32637909-1	1.75451772365608	1.98757664755254	1.35675479027854	1.46494905475476	0.142934817699624	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.257527278805518	0.733321818366247
Merged-chr5-64751420-1	1.43644953364829	0	1.46407015037438	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-3080921-1	2.1597650841004	0	1.40100413580805	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-58955742-1	1.98921605735446	0	1.42692770431919	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-27753373-1	0.913375777426775	0	1.57367958936337	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155525488-1	1.01610055480288	0	1.96136053034048	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132035973-1	2.95260137784406	0	1.35119348836177	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-104583431-1	1.3664047256942	0	1.66769945761329	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75991360-1	2.78060215408309	2.77673232948201	1.99446427259899	1.39221963894276	0.163855897499261	0.881848040118186	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.641446327055861	2.59425606555387
Merged-chr2-103682347-1	3.8933604090616	0.212569171843333	0.925077045493057	0.229785370720161	0.818258553052208	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.61006570269001	1.87744667331019
Merged-chr8-68130202-1	2.5198932833525	0.811981647174432	1.3119842492606	0.618895880519942	0.535984952501144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45092578327654	1.47209300585678
Merged-chr17-23664741-1	2.64444005706302	0	1.3695798126217	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-93167478-1	4.61245159262864	3.09042731003197	0.999878554105903	3.09080267532635	0.00199616241454637	0.0323595209975061	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	2.84812292246362
Merged-chr2-73020026-1	1.28130353759857	0	1.58840849366866	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53116501-1	1.99622471633983	0	1.38763152241006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-67549314-1	4.0412973985265	-0.180838049407528	0.937256250667502	-0.192944084692673	0.84700275906283	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14661142738816	0.666688015277142
Merged-chr5-72843842-1	1.69086787586697	0	1.44384233398028	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-137610915-1	1.70391357589568	0	1.52386170533965	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-106529964-1	2.24097464105998	-2.79354902392858	1.13346150575012	-2.46461746583959	0.0137159597104795	0.140461229155461	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97884556106134	0.609949614787909
Merged-chr7-16183761-1	3.60839194124665	-0.605069820743294	1.19193324349045	-0.507637339631045	0.611707699379793	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.67929438433561	1.64143129445672
Merged-chr2-18983587-1	2.28987493717307	0	1.35947380664583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-119047640-1	4.21561490976378	-0.226691052564983	0.826180167620472	-0.27438452464659	0.783789134365721	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09477696624792	1.92996439256142
Merged-chr19-26854657-1	3.27509174451924	0.283202065426904	0.88014493023193	0.321767535890114	0.747628809993914	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71013792004289	2.2524536714616
Merged-chr8-46794048-1	2.65746272538299	0	1.44278507070182	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-101291227-1	2.85269303034332	2.44633352487805	1.06475093078154	2.29756411021159	0.0215866102975566	0.198901257407765	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.94051118279724
Merged-chr19-36390929-1	1.10013029048426	0	1.64607933647991	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-94986446-1	1.74142414395332	0	1.38067467850605	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172302549-1	1.98226399334425	0	1.38886150205945	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-43569432-1	2.49724684518111	0	1.32829085916842	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-34198579-1	2.04782147621529	0	1.36402496094167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-130884122-1	1.1628970128103	0	1.54665511776481	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38566219-1	2.45543147160122	3.64504812814524	1.29226650089515	2.82066286297782	0.00479245397681908	0.0629609363830357	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	3.39549090284817
Merged-chr10-121515978-1	1.3848826642916	0	1.39019054327676	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-106045874-1	0.802453508042382	0	1.64780034862213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-122241139-1	1.85755137561014	-1.95780000971112	1.46009501908717	-1.34087164473385	0.179962129879426	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.654035992452645	0
Merged-chr10-45122713-1	1.30766323626556	0	1.47661118173145	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-34012258-1	3.72260726863177	1.3572384496498	1.0063348390891	1.34869468583471	0.177435053142909	0.93437593542401	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31847944401919	3.4314922584484
Merged-chr12-8376420-2	5.16012908697142	-0.939669720437028	0.666506425008485	-1.40984345413484	0.158585912403217	0.862573250532765	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.08834859350473	1.64254215594465
Merged-chr5-18006637-1	2.02689281696374	0	1.40959494938433	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38086215-2	4.5116132610309	-3.25478763058754	1.08378898263346	-3.00315622574318	0.00267195231128248	0.0406522458051373	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.72943701195672	0.382164212378408
Merged-chr2-57356387-2	3.29207722016462	0	1.41383263571726	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84706701-1	2.21006782699542	0	1.38305572877563	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-85114905-1	1.96002867805821	0	1.3874758319001	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67202296-1	1.9676625645539	0	1.44966684908476	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-72380991-1	0.881175102437886	0	1.76295114043725	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-116739460-1	4.39640374951969	1.0325401546062	0.971230412251928	1.06312584694719	0.287724884468224	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.64092318768121	3.07906840187467
Merged-chr5-21568057-1	0.999707690745493	0	1.57703851502688	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56675224-1	2.09242042879456	0	1.39314481496335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-82755539-1	1.59418648172854	0	1.50214492150682	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87408855-1	2.77376804824973	-0.128983548086162	1.41627593510604	-0.091072329119611	0.927435119414343	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.0929074641484	0.733321818366247
Merged-chr2-15098580-1	0.872002220339432	0	1.76496926043871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-115815276-1	2.50133391413045	0	1.42228679075859	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18766604-1	2.37222114187325	0	1.33889977956272	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-111068608-1	3.93305140651548	2.41537964674356	0.972335482324387	2.48410110568993	0.0129878926645893	0.134908096337666	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.857056700897293	1.80363332130919
Merged-chr15-58991334-1	0.849120207365832	0	1.59379922418197	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44601262-1	2.15382017952384	0	1.3553800491998	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-168250448-1	2.30392341101188	0	1.35699693997263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-121604282-1	1.25920684401904	0	2.24384124904631	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-67766026-1	1.67361821573121	0.736921914422642	1.53772763158991	0.479227854975013	0.631776540082889	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.465969221699087	0.733321818366247
Merged-chr5-5719954-1	1.02638840665492	0	1.83151799040386	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-133989054-1	2.12557398558329	-0.739854326230345	1.16122930550294	-0.637130257326657	0.524040001268418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4183285379497	1.40684701627341
Merged-chr6-28488523-1	2.33487909943684	0	1.4070889517928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-69066167-1	2.85352582775788	0	1.36775616730208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-42697171-1	1.94527659703877	3.97916837520312	2.15209413892036	1.8489750532936	0.0644614150198638	0.446773298079917	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.208929518994578	2.24913491029145
Merged-chr1-172639505-1	3.6726680337109	1.03754566523913	1.18321377937046	0.876887747023341	0.380547612126324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14243070658662	1.78466604272045
Merged-chr3-14592322-1	1.01598173099618	0	1.62455246352601	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117964291-1	1.31769990354098	0	1.55049778228913	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-78900190-1	1.61348195764306	0	1.38636184422114	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-112473994-1	1.6625324179271	0	1.48580442696763	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-47732901-1	1.10433874152915	0	1.73605663062225	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-144907500-1	1.5050473028152	0	1.40048113937358	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-70017697-1	1.56553217262906	0.35653734074023	1.53842972265639	0.231754064218547	0.816729037141419	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.581010430479917	0.609949614787909
Merged-chr8-3264364-1	3.36803030278595	2.23524040651125	1.04817283188504	2.1325112982478	0.0329648366840045	0.275462943472246	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	1.85297260998396
Merged-chr8-108984583-1	2.08710824873984	0	1.38470520776208	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-110968835-2	1.617533252765	0	1.41472394410558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99233367-1	1.36879896544325	0	1.55838690611323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-122057389-1	3.9765081069251	2.58805377346212	0.873035097920714	2.96443267816612	0.00303241585730458	0.0446700285418001	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.878893210046761	2.52879699405213
Merged-chr8-34142993-2	6.75336859055588	-0.667667660300586	0.7161372958854	-0.932317956538084	0.351172230501677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.49200643935669	2.17645330757991
Merged-chr11-120518665-1	4.1786397201372	0	1.32523604798248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-141553737-1	1.99843509785471	0	1.40242696723534	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-39549372-1	5.24162581760952	1.04224610068388	0.801306980417669	1.30068266738501	0.1933670974843	0.993924829089049	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.70943385004544	2.36869737571727
Merged-chr12-41149220-1	1.00537803847846	0	1.67878013759848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-34051643-1	1.79919797578412	0	1.4369239365482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89973902-1	1.30801474044401	0	1.65358675817669	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-20257141-1	1.35836058724192	0	1.50481817259603	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134248170-1	6.282131380849	0.921668596968141	0.667899991691406	1.37995000514087	0.167602038606867	0.896392438599145	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.60575757190337	3.72524396956073
Merged-chr15-83157498-1	5.64417154015081	0.00642440419150855	0.757146332701736	0.00848502319041057	0.993230012233324	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34286416926053	2.57762704975293
Merged-chr11-35642512-1	2.28985862846467	1.23929052390632	1.5001407870347	0.826116144975969	0.40873821003034	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr3-55693311-1	1.73447079005792	0	1.60348929528896	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-86283323-1	2.14158196117775	0	1.3666896244775	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47629998-1	2.26030188887138	-0.314741890991997	1.00000479794766	-0.314740380884124	0.752958781742973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66102210902428	1.21171060354126
Merged-chr6-38806524-1	0.849565435980344	0	1.65246110455457	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46449959-1	1.76487155728856	0	1.40626393717948	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132113579-1	2.30063855700178	0	1.41537752572548	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-57193820-1	3.23194666733597	1.54456316930635	1.0863782146762	1.42175454960381	0.1550975181309	0.849467975842915	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.914032537518954	2.00098049458557
Merged-chr3-146766774-1	2.02817165776186	0	1.50497148937322	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-55954320-1	1.94699293378995	0	1.43561673081687	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-146414636-1	2.48468648515329	-4.4210222509871	1.11924827972497	-3.94999244678176	7.81536594549344e-05	0.00260828857545564	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.21842374735278	0
Merged-chr6-136838521-1	1.23625353798385	-3.40643813674572	1.31438262507852	-2.59166400388336	0.00955130041328099	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.08520818341084	0
Merged-chr2-129544375-1	2.8299239293562	0.172998693649096	1.13687757823842	0.152170028647372	0.879052832316829	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.09624456008365	1.62042974503458
Merged-chr2-129631741-1	4.77086483920144	0.725713189948037	0.794635792642366	0.913265167096056	0.361103097515207	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.23916858458355	2.6206607351343
Merged-chr10-60351942-1	1.94391953137198	0	1.37385629124288	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-41194890-1	1.65336715527796	0	1.46247500697389	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22566352-1	1.42456694911936	0	1.50728048511354	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54626686-1	1.47212240412791	0	1.53372095741417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-53721805-1	1.83164531310267	0	1.36291267040443	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106055991-1	3.6936251745329	0.0256431660131137	1.03560655077334	0.0247614945984696	0.980245204493048	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.00094035035971	0.733321818366247
Merged-chr11-54442515-1	1.67584380225023	0	1.4288804945313	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-64190550-1	1.48402182451623	0	1.40461915733869	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-65282942-1	2.21118021405116	0	1.42497413818345	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99917861-1	1.7896814114373	0	1.40544345601707	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-165983600-1	3.28847357712582	0	1.32333044757584	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-30322511-1	2.45418895158337	0	1.3348492017764	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-17948295-1	1.57575976422604	0	1.43932854819274	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-53474797-1	0.979993991667174	0	1.51589753473515	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-92250642-1	2.47501663076927	0	1.419516098756	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34612266-1	4.12631936505691	0.627383627650867	0.894650943765202	0.701260790057939	0.483140278692288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.7198573673586	3.21527596580555
Merged-chr9-50885417-1	1.40791437104681	0	1.39638436214286	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-124761761-1	3.43419968851123	0.127207256395806	1.36406243023974	0.0932561835703143	0.925700040775309	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27882814756949	0.887107926668329
Merged-chr6-29929709-1	2.67329114755194	0	1.40578888815794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-81743196-1	1.88071795065269	0	1.43713152327848	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-123185066-2	2.8737576727633	0	1.35839704657196	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-75636925-1	2.28332112187341	0	1.37048085628702	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-136136250-1	2.90457635788516	0	1.34044090037716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167204564-2	2.36904685640423	0	1.36745511146844	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-11662302-1	1.56040374688665	0	1.51402682123143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-41762472-1	3.05681511537469	-0.302710815689907	1.29885858059476	-0.233059102978935	0.815715511575514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.981953565221666	0.986577844696341
Merged-chr15-67692724-1	1.2437864946449	0	1.8866434818715	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36915855-1	1.84978778735692	0	1.39170443308523	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-6706381-2	3.05296402700119	0	1.40759202259202	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96090248-1	3.81723200336574	-0.0785929473018639	0.95962623769767	-0.0818995398567089	0.93472660035277	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.42689496176159	2.24476717970129
Merged-chr5-100662692-1	4.509718985345	0.511757141284145	0.63662683673323	0.803857317593085	0.421479382738862	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.4814594611561	2.98030565572904
Merged-chrX-60356784-1	1.25924376213112	0	1.55334710036731	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73341096-1	1.45791035930986	1.79323388622057	1.49295668029769	1.2011292155262	0.229701081720264	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.469435083901436
Merged-chr15-78516042-1	3.8457088458574	-3.97540184446351	1.0862757325186	-3.65966183857048	0.00025254830279358	0.00652809390599258	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.7917913046276	0
Merged-chr8-71387245-1	4.36552104921226	0.441535675590825	1.49995952933266	0.294365059160807	0.768478963460407	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16741813699834	2.21003394305841
Merged-chr3-142263884-1	2.09687669848166	0	1.49311361149803	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-106618814-1	1.76071146943591	1.51721756687296	2.3387082031388	0.648741713411144	0.516505337447508	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.31495854024319
Merged-chr8-84955852-1	3.44613002160421	2.57769775533944	1.23506982079124	2.08708666663724	0.03688030109898	0.297783428896655	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	1.47878878667606
Merged-chr2-167271682-1	1.88434051268937	0	1.472463476664	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167205378-1	1.8950278476443	0	1.41610965212756	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53862109-1	0.942208272503157	0	1.54265113948946	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-94506102-1	2.9222000800702	0	1.32051657629316	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-52010708-1	3.00230456066007	2.00567034753077	1.13581807933218	1.76583766716412	0.0774230871318106	0.512974224000323	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.598347757345043	1.69017997474274
Merged-chr18-75214717-1	2.7219967616681	1.04145399708067	0.872521552377796	1.19361406516836	0.232628969521423	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.30011017000912	2.47429076154865
Merged-chr2-92007633-1	2.0134391811265	0.372824091953252	1.14490151971085	0.325638568500993	0.744697827903305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12034034514658	0.845523456341755
Merged-chr6-82916059-1	4.75131140288087	-0.0924976474017522	0.814214038487987	-0.113603601791885	0.909552032021962	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53459221990538	1.31470332505763
Merged-chr2-122138126-1	3.89213305242598	-0.4177338455317	1.14107511644407	-0.366087945930751	0.714299451881969	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.84364512579647	0.581381506691384
Merged-chr3-87423882-1	1.92028537684091	-0.643217421247265	1.27131564604417	-0.505946279548042	0.612894362407919	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.32045756072512	0.733321818366247
Merged-chr10-7296890-1	2.41850181518301	-2.6012272250511	1.09308380161365	-2.37971436518507	0.0173260622998193	0.167582721587328	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.2076907123528	0.733321818366247
Merged-chr5-43276636-1	1.93604123449858	0	1.48902911207944	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-57427369-1	2.28171696394691	1.79366870728914	1.15625179072006	1.55127864162885	0.120834922997304	0.713737582769757	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.962345731450848	1.3480509837169
Merged-chr2-6309613-1	2.67709065601737	1.93859205827968	1.38160130063069	1.40314869231429	0.16057250374202	0.870263816001166	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.563523181795778
Merged-chr1-88272947-1	1.96408251382024	0	1.38559390267341	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53818939-1	1.74435272615996	0	1.4615808737479	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-143919082-1	1.76499111167771	0	1.43727673780117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-160653149-1	1.38283085460894	0	1.62990886597673	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-32907525-1	0.966231075084184	0	1.94224038809744	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-36019038-1	2.47508107577101	0	1.33299378646891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-73646188-1	4.18071201878078	0	1.31361861831939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-62287501-1	1.45361874576457	0	1.90660527790927	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-50275633-1	3.03416163461797	0	1.33581805852263	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-75159740-1	2.22037475191779	2.09083585121886	1.15085240973233	1.8167714934925	0.0692521094389594	0.471537808002318	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	1.20539659680455
Merged-chr7-89168759-1	2.41810436353402	0	1.35441435423492	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-49135251-1	2.14435520450969	0	1.42074455372279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63595345-1	2.01875006123876	0	1.43027041392151	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-85663070-1	2.33514348715402	0	1.36301811291096	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-17796105-1	4.43208373407974	1.03399448483376	0.764635023319297	1.35227193798313	0.176288338010895	0.930286500497452	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.78486125783143	2.47394001682376
Merged-chr19-14508349-1	2.58528912894614	0	1.34032135502729	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171594340-1	2.47525465545537	0	1.38706624308871	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-40763151-1	2.10960198279598	2.93953134088059	1.52631996022483	1.92589458140061	0.0541175381798469	0.392402157468112	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.19380919831911
Merged-chr2-173081053-1	1.66759249621248	0	1.57029003067979	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14100715-1	1.43902882077462	0	1.44017429931353	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-121124905-1	1.30494578762397	0.224298092811351	1.430205655939	0.156829258701323	0.875379413065293	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0.688405034366054
Merged-chr7-118471375-1	3.85595899096567	1.86776588183831	1.01858285794973	1.83369066861961	0.0666999245610744	0.458748896996944	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860868482386745	2.30811930973386
Merged-chr16-10769858-1	2.22204289905447	0	1.39175604095008	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-52979720-1	1.55773473092692	0	1.41159786854892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27229615-1	2.08184941242065	0	1.39164417019653	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-109123002-1	2.64408616174127	0	1.34854964433279	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-11271009-1	0.938646759047068	0	1.66127196915737	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-123280462-1	1.13362943282899	0	1.51193035491622	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-47454873-1	1.87351338641971	0	1.46660359697124	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-31151272-1	1.87740514763644	0	1.35229251421061	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37964240-1	4.54900415913595	0.654305344299885	0.733708261793903	0.891778624245175	0.372511601249514	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.04208974181869	2.30243522796951
Merged-chrX-51065971-1	1.79316683956971	0	1.38035124144416	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-52794404-1	1.46361944762339	-1.88657114936674	1.35178306724857	-1.39561679316392	0.162829922692474	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.54581521408437	0.469435083901436
Merged-chr14-76875229-1	5.62031439217841	0.605626735788801	0.744470830012926	0.813499617947806	0.415931665244596	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.45005371885265	2.36601290795399
Merged-chr10-94960995-1	1.80464844844894	0	1.4321015071584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115957545-1	5.0146692658623	-0.184248840569224	0.780449567962546	-0.236080392805171	0.813370288232429	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.99245006301899	1.99834080004871
Merged-chr1-51518842-1	1.2957415112694	0	1.43193383941918	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-137369038-1	4.07189528307809	1.57087727241749	0.987190323555337	1.59126080851362	0.111550892940173	0.673697852586719	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.22163299749088	2.7727513274741
Merged-chr19-6283249-1	1.38104891244808	0	2.23478051036328	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-135628942-1	3.65096210366829	1.94642349846013	1.16750353558325	1.66716711267838	0.0954811801862967	0.598724997644539	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.735627456805112
Merged-chr13-70618953-1	2.14644364793773	0	1.41280907338728	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-18277635-1	1.68100206280871	0	1.37533216749101	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-82820846-1	1.06352513405164	0	1.72162742534658	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-9136658-1	1.8332605074338	0	1.37000152703597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-112142794-1	2.1214153588611	0	1.40036358175036	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-24854506-1	1.17920741725217	0	1.80912269531288	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-104369781-1	1.28923757389524	0	1.47850401341797	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-158534291-1	1.99165983265173	0	1.36408196557438	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-136919558-1	2.4467293453928	0	1.34864356391683	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155070038-1	2.12229468390913	0	1.33955667195939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-56692743-1	1.57628245443991	0	1.39412891735276	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88232876-1	1.59424979952304	0	1.55091590717286	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-104189130-1	6.49296278750775	1.15042069680712	0.737421881595259	1.56005771664712	0.118746242517794	0.705417451233436	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.34896878297641	3.10004569325541
Merged-chr10-93941267-1	2.20341144693758	1.07853334819869	1.35472940896082	0.796124555254176	0.425959643063854	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.871810791226776	0.843323834477631
Merged-chr11-107625790-1	1.52504096513716	0	1.49269374732353	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96876539-1	1.49131319849762	0	1.41486098459359	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-58570590-1	4.22409454119229	-0.932330369367946	0.855735810423143	-1.08950724979819	0.275930259575652	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.66443404080548	1.73775798795819
Merged-chr4-129086205-1	1.48920805368346	0	1.47981513265278	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-77792255-1	1.9227421651516	-0.670950737901514	1.44678621742856	-0.463752508711359	0.642825072268558	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17348089936755	1.15692263537643
Merged-chr4-40285851-1	1.86448478529617	0	1.44253440015871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-53827790-1	1.49802297494651	0	1.44535012496378	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-77813846-1	1.83621305427018	0	1.39882852386983	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-171498372-1	2.69803768151712	-0.303559674535876	1.36647409230276	-0.222148137491815	0.824198565618248	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.752776503073505	0.581381506691384
Merged-chr2-144730000-1	1.04067406525707	0	1.67319525136597	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-5777664-1	1.29480980011155	0	1.56359168240015	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-46442086-1	1.77384899443302	0	1.37110724128432	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125172635-1	2.4041434591032	-0.929124010372314	1.32911921972631	-0.699052422523572	0.48451927025095	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.592392066889462	0
Merged-chr7-139168880-1	2.70906283582474	1.57913412847774	1.16423697809678	1.356368298024	0.174982014744772	0.925186077798517	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.11083935386948	2.08628700317133
Merged-chr2-162922391-1	2.1731118141254	0	1.40044279458268	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-120473871-1	1.40925066057458	0	1.59643755434928	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-41614691-1	1.51717863371813	0	1.60544776740687	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99406057-1	1.60034637558816	0	1.44182192259039	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-36836656-1	1.51150058791677	0	1.45364677241698	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59109263-1	3.06342554175907	0	1.32960180421826	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67842526-2	2.73068347318895	0	1.33185352039937	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-149092807-2	3.81996052245835	-2.69311578650202	1.0893939651571	-2.47212291662882	0.0134313326658408	0.138326850178414	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.15960639652768	0.423054662900563
Merged-chr8-43370112-2	2.95006064353703	1.90667184312192	1.40115172303105	1.36078899364111	0.173580381120685	0.920605761278491	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.683637474991079
Merged-chr9-48413260-1	5.27257236069379	3.22250076211991	1.08961371169878	2.95747082431243	0.00310174100850746	0.0455270368243325	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.318312771909985	2.15271387927268
Merged-chr6-38826058-1	1.55469813502255	0	1.48943841914469	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-86753260-1	1.01351158368549	0	1.64715157015233	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123959943-1	2.96217743816674	4.7777642262758	1.38814236625465	3.44184021929011	0.000577771412333831	0.0122900555697808	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.05637383168099
Merged-chr15-59005233-1	1.40454561753112	0	1.44474895868772	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74526684-1	2.01364415339387	0	1.38209130981949	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-78690419-1	3.24317147943211	-0.347593677213545	1.03375981745756	-0.336242201857314	0.736688231139952	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.92538203797897	0.958904680953568
Merged-chr2-161041418-1	2.22605834932606	0	1.34543385996144	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-94648728-1	0.58843318646671	0	2.11179228295264	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-111326274-1	1.15524550250925	0	1.56657564378353	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-109466735-1	2.21690341286848	-2.24201268601896	1.27607504913448	-1.75695989631616	0.0789246450970734	0.520319800092147	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27668327414694	0
Merged-chr13-23401116-1	1.08027635597646	0	1.61148989620105	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-23473312-1	2.72092080368997	-1.60947747271255	0.848230339649908	-1.89745331837203	0.0577681343136039	0.413010558518245	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.97566983480408	1.20275690226768
Merged-chr14-76764762-1	3.50407481365468	-0.419970102618549	1.36331546839943	-0.308050566690631	0.758043855289785	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	0
Merged-chr8-36937740-1	2.38243340883576	0.465191048801491	0.945597885783845	0.491954408734612	0.622751573744939	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.47283735483668	1.72583980988184
Merged-chr2-69676892-1	1.90327668487415	0	1.43110816151744	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11121281-1	2.558523345992	0	1.37434875976861	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-144338310-1	2.00723041455412	0	1.36799916727592	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-88252790-1	1.60002986189987	0	1.47519936246776	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-166026146-1	1.59294396340359	0	1.42078606618248	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-134110895-1	3.32682313790742	-0.909066199941162	1.11813299044225	-0.81302153474749	0.41620571153582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.523910098555	1.11812572528152
Merged-chr2-166968728-1	2.84474793949522	0	1.33397629701335	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-163727582-1	1.20835676600811	0	1.48785990561903	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-148903132-1	2.66361333558061	0.985910524029591	0.881740127857927	1.11814183440276	0.263506421680161	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.37907105288836	2.29698610158585
Merged-chr1-24249329-1	4.96827839234133	1.18232895218123	0.944275123890204	1.25210219168996	0.210532629191865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.38308983173401	2.6709456269636
Merged-chr4-109472771-1	1.57384902367307	0	1.47052201070255	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-59335078-1	1.46973960713	0	1.46050633999502	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-35293870-1	1.97849233563173	0	1.42707849717942	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132728637-1	1.8719776759784	-2.77889608632295	1.44587450692204	-1.92194832471223	0.0546122603122336	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.14126094015715	0
Merged-chr1-138253116-1	1.42554797193185	0	1.39453034742253	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90894360-1	3.10990415397959	1.44762367303942	1.20824311471849	1.19812284084624	0.230869198002973	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.518641898071127	1.21171060354126
Merged-chr6-145822339-1	0.720347381751544	0	2.0527951765391	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-14639279-1	2.48679465363325	-3.58586085033369	1.35370585959302	-2.64892171731585	0.0080749033508001	0.0937400309755522	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98392519297219	0
Merged-chr14-70859031-1	1.66773505836411	-0.079945554875929	1.44949818857215	-0.0551539529377962	0.95601581329198	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862813066341065	0.683637474991079
Merged-chr7-41599768-1	1.19349356484931	0	1.46511545288583	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-125398149-1	4.98002565066345	1.12576935266229	0.856410466260258	1.3145207783112	0.188671010407318	0.977275266285487	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.2765552197136	2.91096270096113
Merged-chr9-62963835-1	2.06473893077244	0	1.38306042805966	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-56897230-1	1.69355906868025	0	1.48022962551759	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-62196966-1	2.69888240938473	0	1.34628491627717	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140414361-1	3.35282803981852	-0.119531223360571	1.28588619168048	-0.0929563005917027	0.925938277920213	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53776636689114	0.961728545204858
Merged-chr11-45649453-1	1.30454542229719	0	1.47338907740035	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74840213-1	1.24728107979574	0	1.74894508645584	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-40723802-1	3.10786745933218	4.16896769260408	1.13408591554545	3.6760598429608	0.000236863982345863	0.00622134172643957	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	3.71020808893923
Merged-chrX-73363495-1	1.84126352493279	0	1.42819602359902	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-37543728-1	1.24323825042186	0	1.48434621637564	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-83608234-1	1.77162060316961	0	1.43318024406557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-20955480-1	1.04715571450482	0	1.56306567960247	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139253220-1	4.45229941222468	0.530570254013544	0.793776180862552	0.668412918912487	0.503870051230144	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0480023121489	1.66210910851734
Merged-chr11-11771740-1	1.36556057373081	0	1.491101365614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36265493-1	1.23625963820005	0	1.58353056986119	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-167942415-1	2.59505703123059	0	1.33281394766499	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49097787-1	2.13589341855552	0	1.45574466152635	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-45945651-1	1.1784519682476	0	1.46803941307008	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-84648268-1	1.14190238011479	0	1.42775048740447	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-49323253-1	2.77706503927018	0	1.32832163967766	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-127559534-1	4.12808770295061	-0.55783813257605	0.829890916081701	-0.672182478162144	0.501467534312088	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.22597609083507	1.90896656829731
Merged-chr3-103854750-1	2.97016136353001	2.4644273143263	1.82887486578934	1.34751007869675	0.177816009624887	0.935929517917671	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961036207701452	3.03502929532434
Merged-chr8-124241116-1	3.92211735885239	-1.11913643485167	0.942389714258071	-1.18755162319736	0.235010106788063	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75556730486845	0.666688015277142
Merged-chr5-92442414-1	2.78366765314682	0	1.36808695912546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-75505486-1	2.76302691846853	1.13340712262775	1.1523242630364	0.983583492064287	0.325320345092376	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.55165418625815	2.53825835672906
Merged-chr9-35110016-1	2.12646266129805	0	1.38255179542996	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-121089806-1	1.34826574690538	0	1.49810128546064	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-96475101-1	1.3426764107881	0	1.47325757646428	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-68362418-1	0.999314931357011	0	1.52328859448706	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-57577181-1	1.32425691615121	0	1.55363434151901	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-60444830-1	3.26545343158782	-0.0821735437575227	1.26647901527184	-0.0648834625498197	0.948266787819556	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961036207701452	0.666688015277142
Merged-chr4-75318319-1	1.56074307885334	0	1.44642846419936	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-8524037-1	1.66334939735417	0	1.4186724307847	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-25035551-1	2.60548855050327	1.38942567875914	1.09298975334602	1.27121564909976	0.20365194080792	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.39123393625527	2.38097024974186
Merged-chr5-28043068-1	2.62561266037929	-1.04837693975457	1.40240672845971	-0.747555554661395	0.454728281638082	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	0
Merged-chr2-53001344-1	1.47995420936829	0	1.50457153887482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-121394050-1	6.61183948595746	0.526176705630572	0.67400586359069	0.780670813199496	0.434996131084583	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.07516801465705	3.67284931279951
Merged-chr17-65728211-1	2.88376060610201	0	1.41792362549247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-30705668-1	2.22459757213525	0	1.39043076554414	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-88475258-1	1.12301688607336	0	1.54783579875527	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-129687375-1	2.5056524825621	5.16995357198863	1.33880851172981	3.86160793473651	0.000112643228439537	0.00347698838243268	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.73372131812677
Merged-chr5-4537077-1	1.79315719990216	0	1.45291320397156	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-60730477-1	1.41593168400214	0	1.46528873929588	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-125509661-1	4.37306655774752	2.15611094179663	1.01465611004236	2.12496718884058	0.0335893508201418	0.279040137133611	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.765888511628843	2.36155420913382
Merged-chr10-5264590-1	3.92166850133235	-1.06339175899772	0.9758596187313	-1.08969747142547	0.275846430337784	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.17554147567388	1.15658857927843
Merged-chr7-30180977-1	4.82936188419734	0.784176435486915	0.890638690066695	0.880465270858818	0.378607310929426	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.10583817805185	2.63882497122968
Merged-chr2-31768784-1	2.35074017265661	0	1.37290001343103	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-155533653-1	1.26712922163426	0	1.51528593151425	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-7391222-1	1.48016006279317	0	1.38498455495999	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-61257137-1	3.78541529609198	-0.722476319828486	0.684938030498853	-1.05480538042587	0.291514343365037	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.10709597313637	2.11086637835816
Merged-chr5-90908398-1	1.84051516949624	0	1.43427032569059	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-192943792-1	3.62666033325841	2.71405322205828	1.1681608697274	2.32335570587262	0.0201600515436919	0.188385346514241	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.409920288747949	1.48233004913473
Merged-chr1-7099093-1	1.42067922112725	0	1.44884083479794	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88757197-1	2.92262852259473	1.56098326895897	0.79103703900067	1.9733377730719	0.0484570920878678	0.362763124637449	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.28688339914476	2.9868467483527
Merged-chr12-17564690-1	2.07509929867662	3.88418213550709	1.36769192442422	2.83995398828013	0.00451200413299574	0.0601103816666136	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	2.37317289713092
Merged-chr1-38039145-1	1.89088618073715	0	1.47695573903838	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-17749577-1	1.94054793798281	0	1.34493772356916	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167357569-1	1.83241085555402	0	1.38225965262974	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25989480-1	3.76596666293567	1.14862387526219	0.899176700327244	1.27741730278839	0.201454959276349	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.01449608303713	2.53388634203561
Merged-chr16-58702486-1	3.19352502235123	1.6738974258377	1.02072363120914	1.63991248429785	0.101023364710585	0.625850662720692	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.769228776135155	1.486851288245
Merged-chr1-131993370-1	1.70711739123786	0	1.4051799305811	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80502562-1	2.00790953918092	-0.510964893679705	1.13085744896829	-0.451838464826728	0.651385357245677	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.68062670481501	1.1517642783294
Merged-chr10-61602516-1	1.33382506286216	0	1.56273416720761	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-32194237-1	5.97660294737489	1.47928315399669	0.599491939074022	2.46756137585702	0.0136036898006625	0.139595903535504	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.03538747048248	3.43445235166372
Merged-chr4-89470118-1	2.33423418473487	0	1.39927712685154	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-23855418-1	1.78087740204625	0	1.38702678425872	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78499303-1	1.6205142409042	0	1.50648951536176	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-167318413-1	2.21899100859213	0	1.38979141971912	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-81434419-1	1.76391264633909	0	1.43981197214524	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-17467003-1	0.784124833576419	0	1.83591596641131	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-104352315-1	1.90600112862196	0	1.38483875216021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-29244073-1	1.07424920906108	0	1.48395126886332	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-121550583-1	2.4107213625276	0	1.39069515663794	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-26404709-1	3.63814432494861	1.63309843380569	1.0767643357786	1.51667210692375	0.129349490023066	0.747411068622093	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.58888361880484	2.39668277347939
Merged-chr3-101609522-1	1.79477650824462	0	1.42817422240789	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-38160235-1	1.32964988943435	0	1.79265839342398	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-103335539-1	5.1299042870221	0.819025793166016	0.81377566526075	1.00645156660415	0.314198398779852	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79410384556337	2.0894787037384
Merged-chr18-7756982-1	2.44995330079504	0	1.35798978851976	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-115138774-1	2.34509806168875	0	1.44585251594988	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-90185098-1	2.76823006846305	0.319557619861394	1.25094865935062	0.255452226174717	0.798373837741393	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.48391572194588	3.0644347080784
Merged-chr17-31095502-1	1.71572669773438	2.39965575385057	1.57455876544556	1.52401790680168	0.127504238065157	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.328838153636194	1.76628008406346
Merged-chr1-54846512-1	3.72163635015751	0.301159737479146	0.8299410248411	0.362868840634557	0.716702864102038	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.58520762287254	1.86231980429102
Merged-chr9-78625964-1	4.44458619605852	-3.10626683422041	1.07054003107681	-2.90158867865592	0.00371275678788445	0.0519448659764244	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.25035597780957	0.61242769162773
Merged-chr1-23918495-1	2.76309992216864	-1.7454666459425	1.36498731499312	-1.27874202695524	0.200987914833618	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.88206539420857	0.61242769162773
Merged-chr6-114655453-1	2.10056450812053	0	1.37907097037419	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-19005434-1	1.3658628426137	0	1.64506248100373	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-70035865-1	1.15539647559722	0	1.58694027543419	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3753961-1	2.2977641260227	0	1.37245772526336	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97802924-1	1.65754816341621	0	1.41587178580666	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-130264951-1	2.21637503307884	0	1.36737800682215	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-122591576-1	2.22334088057284	0	1.42545087786596	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-21916110-1	1.50217864556228	0	1.52093047656255	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-119614007-1	1.56521865484385	0	1.46987289740861	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-99219942-1	2.24643115496677	0	1.38330291364509	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-27957138-1	1.41117127091082	0	1.40723679947406	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-97678776-1	1.23706047076173	0	1.84023533146558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12587778-1	3.02886892326984	0.660091685190945	1.07675285777415	0.613039176469405	0.539850435953729	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.71094032851415	2.94640134381309
Merged-chr6-146586584-1	1.90573982662789	-0.596219402444404	2.03515210672122	-0.292960609909869	0.769552260091623	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17267789052377	0.735627456805112
Merged-chr7-81318994-2	2.98912745711811	0	1.47879755832432	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-8420818-1	0.917697050617712	0	1.51953222061892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-117941637-1	1.24654397824882	0	1.61062772735204	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-99607802-1	1.00288747508562	0	1.54691645781516	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46850314-1	1.25641579920702	0	1.47123942844931	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85051905-1	2.68539792499594	0	1.3819000044233	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-36238713-1	3.95729454467286	0.913759197212984	0.880980373097493	1.03720721268766	0.299639297363728	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.28249397815247	3.40111519105355
Merged-chr18-48927642-1	4.13303258358727	2.45642983309302	1.24908868816903	1.96657759882027	0.0492319281204362	0.366538632215794	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702988096853987	2.81129108659853
Merged-chr18-55041083-1	2.11720384414377	0	1.38216288249528	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-91361698-1	1.5910572276225	0	1.39453670558761	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-58503075-1	1.05065592899093	0	1.42619971159098	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-133177576-1	1.63032445491007	0	1.41019652724371	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-118766555-1	1.68080927076283	0	1.5302184931417	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35029696-1	1.68002662854538	0	1.42885079744598	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31471546-1	2.18565357263284	0	1.3448255323929	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140756853-1	0.808105524832303	0	1.7861437090568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-24047648-1	1.27096703744884	0	1.42384004653524	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-139701437-1	4.74942576152975	0.818642912471158	0.791263942471907	1.03460156406688	0.30085502326989	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.16770630390327	2.84917241302084
Merged-chr5-76118577-1	0.958927370243882	0	1.67978707623932	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-69530486-1	3.32735611339106	-0.156115513779169	0.891321102929191	-0.175150698514956	0.860961222278534	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.86986701531549	2.48475512893435
Merged-chr6-136718528-1	3.29927784963316	1.59286646416468	1.05237554086191	1.51359130112441	0.130129528762493	0.750524641351623	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.72953260749044	2.88486980732542
Merged-chr11-61457102-1	1.83674480692582	0	1.44085425787293	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-82915176-1	3.2307486694169	0.599384788105362	0.857225411184684	0.699214909269912	0.484417734481694	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.57107468309719	3.46026986523757
Merged-chr2-167739217-1	1.80050771302184	0	1.41352913498471	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-34609669-1	3.10354993213939	-0.322716909805445	1.24159195302501	-0.259921876119751	0.794924036371148	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.53406401854854	1.26501898168246
Merged-chr5-41857739-1	3.54607252563448	-1.17921020523996	1.02375308523349	-1.15185020904822	0.249382631560812	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.31356784847222	0.905469781553611
Merged-chr8-8225306-1	1.16576172318475	0	1.51569993874572	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-75900380-1	1.58908685661571	0	1.41975601899868	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97397807-1	1.69350584420035	0	1.45815091057009	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-92479835-1	2.7911203920924	1.10930711429693	1.81705876067348	0.610496005030556	0.541533288985646	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05257464479105	2.18210741161866
Merged-chr2-168112142-1	1.71562180268141	0	1.4339204230258	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-9062896-1	2.50033283753086	0	1.38795591924453	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-42394739-1	3.01617799794971	0	1.4209759202111	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-76668173-1	1.17409982050529	0	1.5204314461482	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53124165-1	2.81460173173478	0	1.32872841175973	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-117557411-1	1.31669410302236	0	1.44806960817544	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-89679578-1	2.63363395202978	0	1.38889220061163	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74646610-1	1.27139934488669	0	1.40977087621274	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-12013684-1	8.44381597605816	1.90044583047757	0.583352754127864	3.2577986767523	0.0011228003201881	0.0207495785415757	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85188026108307	3.81823535195718
Merged-chr10-12968464-1	2.12692255500436	0	1.39141696276473	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-139271446-1	2.2372270510698	2.28140540367629	2.01508163843573	1.1321652483754	0.257564967350263	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.73596151290311
Merged-chr11-72946549-2	2.67841156793348	0	1.42135354376006	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43725866-1	2.4325592576799	0	1.35804532718038	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-120700243-1	1.96127857086312	0	1.37771842729404	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-125450918-1	2.03743315294959	2.37255209704814	2.32546501951841	1.02024845660309	0.307610641677937	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.504043929084629	1.76331258957479
Merged-chr6-119520844-1	1.66949014684198	-2.64176674008575	1.41820275364122	-1.86275674144832	0.0624964987339599	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.74602510019784	0.423054662900563
Merged-chr18-60658682-1	3.20007535250703	2.27935350886748	1.31682297182548	1.73094907792174	0.0834608471418049	0.541269602751923	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702988096853987	3.16895159875229
Merged-chr1-51580281-1	1.47603480136086	0	1.49159411261857	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-77336590-1	2.72343450555455	0	1.36815515829992	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83730397-1	1.1703391069818	0	1.68552935490102	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-74529827-1	3.35968254386261	0.504523748642575	1.37914500809969	0.365823568717949	0.714496731826131	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	0.61242769162773
Merged-chr16-94066384-1	1.58642854413582	0	1.45611171717671	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-68369965-1	1.01803853278782	0	1.49301428663871	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-58734028-1	4.3978456396211	-0.164371111625816	0.841370303029015	-0.195361199502839	0.84511018963662	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.85478903279406	1.41695929335733
Merged-chr7-117481077-1	0.906027213308853	0	1.71728982993993	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-5112822-1	1.42821213469405	0	1.55117724697972	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-82235665-1	1.01526521682675	0	1.51371533840658	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-76317131-1	1.35674241957361	0	1.5847952020411	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-107978999-1	1.39932790904634	0	1.39631670188138	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-12781107-1	1.70478334540747	0	1.49200376964779	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-84405409-1	1.45909502411163	0	1.49431071787213	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129066513-1	1.83257686960723	0	1.47615310929697	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-101339700-1	2.33137669383423	0	1.34354273704778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-28384354-1	1.45981854549093	0	1.48125077649978	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-115096310-1	1.35257539460177	0	1.44460746718148	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-56745266-1	2.08179322148687	0	1.42090345145305	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-100629947-1	2.14127859302382	0	1.38753677183124	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-60734451-1	1.51841690069133	0	1.38551577425243	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-71044302-1	2.18271238235488	0	1.46709148651247	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-92147752-1	1.97264191504212	0	1.37952940884126	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-21850461-1	2.96596543886362	1.37514897837632	0.971168536680881	1.41597356837373	0.156783243370577	0.855530799220529	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.16781519049114	2.10356013656012
Merged-chr5-147056040-1	1.61594601005161	0	1.37865567700678	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-45160726-1	2.54211305745285	0.693369960848009	1.05790328291556	0.655419046377375	0.512197991952827	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.04688881995689	2.00098049458557
Merged-chr1-137923868-1	1.06917700615006	0	1.52510457959752	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-73513918-1	2.49231889595065	0	1.3792882106933	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-53209405-1	1.41567203235942	0	1.41376798006005	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-120027508-1	2.42817115597339	1.66538018890387	1.30828160824584	1.27295238151123	0.20303493986243	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.575840050715503	1.29684500016202
Merged-chr8-35988464-1	3.86541203727448	2.12212425023606	1.84967710072302	1.14729443825982	0.251259951876843	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.892005523365874	2.79419538023548
Merged-chr4-118417518-1	3.89641672770541	-0.153747402033005	0.712952356293272	-0.215648914932208	0.82926142415925	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.64020460807445	2.21307952544685
Merged-chrX-53710402-1	1.24276010701894	0	1.63881654256093	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-65404840-1	1.24080464794843	0	1.55182587221583	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22356611-1	1.62123309042821	0	1.45227536871154	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-115710229-1	5.12737449509279	0.473741199872298	0.686089417210393	0.690494836370611	0.489883056040288	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.93598220057513	2.35287325867535
Merged-chr11-113865867-1	1.63835410286895	0	1.35465518346115	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-38433923-1	1.7659921663311	0	1.3582219862568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-98052163-1	5.0871595152651	1.37693812887584	1.23755086692523	1.11263154160033	0.26586670812408	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	0.683637474991079
Merged-chr16-95893500-1	2.24000456229305	0	1.39357788312164	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96254481-1	0.968380579396894	0	1.70067719546879	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-96374224-1	2.77265409071042	1.32295350786257	1.30256046756221	1.0156561179371	0.309793171465949	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27952488015157	3.20422395464686
Merged-chr2-75892248-1	2.58304554784521	0	1.45668351159959	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-63085920-1	1.96019503879573	0	1.35791058970351	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-114294723-1	4.36185348994934	-0.307902775878704	0.788596670679197	-0.390443920608384	0.696208315875865	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87058868401508	1.76628008406346
Merged-chr18-36386574-1	2.46911023243021	0	1.39455766141446	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-116676970-1	4.51170517619466	0	1.34265402014602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-58668197-1	1.98596208277075	0	1.37785125317469	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68778774-1	1.01843773821697	0	1.53922782265514	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-107599635-1	1.76441917286052	0	1.39256500490275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-11787110-1	2.04707083505712	0	1.41062103343716	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-68046009-1	1.8329527360706	0	1.42543657620798	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-35779151-1	1.8155405570077	0	1.50347590488824	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-3077543-1	3.50624782069599	1.2052692674757	0.974822052565133	1.23639926313133	0.21631018989641	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.24525733388257	3.46435260825227
Merged-chr11-85652304-1	1.31387390074753	0	1.43398512598421	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-140567549-1	2.75197137893518	0.723245340081089	1.45552369259808	0.496896988870108	0.619261695035137	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.880460860551173	1.31734301959449
Merged-chr8-82361020-1	1.20691037374132	0	1.48225153196129	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-47643424-1	3.05099602773913	1.67683210850152	0.982655101652413	1.70642996274257	0.0879280559241085	0.562206139179725	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	1.48967077741001
Merged-chr9-13673478-1	1.09524768420021	0	1.54271212822011	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-88632000-1	4.64594226734735	0.912657194088338	0.797525260867914	1.14436148780432	0.252473752923651	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.32017573432224	2.66223990676383
Merged-chr6-5324845-1	3.59925779909783	0	1.37241440127267	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-165612912-1	1.28037028275811	0	1.58067183965803	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-135549030-1	3.87757676206733	1.63236358266806	0.818404187961042	1.99456895099095	0.0460899127904231	0.349193210574259	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.5466274228736	3.3869501380164
Merged-chr14-103350086-1	1.88506560170813	0	1.39276771267055	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-96460793-1	1.18084879263578	0	1.48404523682371	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-16305036-1	2.0607893469181	0	1.38125688272573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134067157-1	2.33675375083867	0	1.36571155473898	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-3674242-1	1.99746111427096	0	1.42433038621787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-148993951-1	2.31994594587815	0	1.37464151097825	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-59340177-1	1.5109658648245	0	1.36450655697694	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-52444608-1	1.71076190453675	0	1.46049588282347	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-33235879-1	2.19616718758146	0	1.34316940763767	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-74322621-1	2.34635843285244	0	1.38491640969711	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr15-96729238-1	2.05448374894547	0	1.38776427497192	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33836146-1	2.21270808871481	2.2273076129426	1.99143846924847	1.11844159251536	0.263378438822789	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.607349485069624	2.40094721382228
Merged-chr7-110225861-1	1.5887738650981	0	1.42750856612073	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-77458440-1	1.22477084746164	0	2.25473121627446	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-96924452-1	1.83599334003069	1.52956318363779	1.6520568577262	0.925853838797653	0.354521943407486	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.413292742667887	1.20275690226768
Merged-chr11-65720148-1	2.29397113884836	0	1.35325154008193	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-16198395-1	3.20485021923885	-0.0466330481270969	1.87615800496784	-0.0248556081116933	0.980170135878489	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917718256087455	2.09093093088911
Merged-chr8-122835258-1	2.36871629324071	0	1.33397457806258	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-22358194-1	1.66621212039249	0	1.45264136158581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-82441803-1	1.56401266594102	0	1.43873309900851	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-63957504-1	2.20107078366283	0	1.46049225182436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-45940640-1	2.92729952386633	-2.89410739192431	1.19621767913449	-2.41938189211375	0.0155469085687957	0.153951854422871	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.0863669268604	0.306240821987646
Merged-chr7-30176639-1	3.41825298594644	2.23936412592643	0.911206274783624	2.45758198543814	0.0139875879599976	0.142195538710953	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.910402644400882	2.96789871560186
Merged-chr12-76345956-1	2.83086776255045	0	1.33498711633876	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-24386416-1	3.14167407916305	2.98677818908421	1.07071979104645	2.7895049797904	0.00527886846319161	0.0679710223833929	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.917336671752516	3.20901305541235
Merged-chr5-8911725-1	1.95062612413057	0	1.36907303765367	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-92400755-1	2.65347861805749	3.89964132287443	1.87980541064369	2.07449201964958	0.0380336391494268	0.304576738217947	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.511982678325836	3.1974551018134
Merged-chr7-101227637-1	1.52412339934746	0	1.45440394547845	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-31213116-1	1.12148083299018	0	1.59620288034826	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-88301349-1	4.31505425568837	-0.0150971482675474	0.687312240160895	-0.0219654872784068	0.982475486053645	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75897670000503	2.79592662927084
Merged-chr4-139226158-1	4.30390579078033	-0.625056948459568	0.911025253045822	-0.686102768688158	0.492648305131299	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.27918610452382	1.97634481356229
Merged-chr5-25023164-1	1.77452008652521	0	1.40471010145165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-157144857-1	2.85128641353797	-1.74993066723886	1.25622814999113	-1.39300386418759	0.163618622166774	0.881000534287247	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.79645424053645	0.793480537552656
Merged-chr1-171612557-1	2.96632635713633	-3.13100608340146	1.194042674907	-2.62218943191902	0.00873668548279834	0.0999137993627827	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.29551041236584	0
Merged-chr1-39896715-1	2.07559918664505	0	1.53836540084583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-3292218-1	2.21943548926624	0	1.35416475632416	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-57180565-1	1.51317195302452	0	1.43237689113646	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-91207504-1	2.23305183149547	0	1.37651027901939	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-107795098-1	1.28598985741794	0	1.50825471269927	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-154874537-1	2.40792445095257	1.93181865512426	1.83129893441671	1.05488984830298	0.291475705675528	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.31297766861246	2.2378570496781
Merged-chr11-50259819-1	1.2919575856359	0	1.62997457360729	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-173214731-1	2.17015138423008	0	1.47030700727527	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-128769432-1	1.85765471926214	0	1.39143979356829	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-89336137-1	3.09447517566695	0.277388960054577	1.2850757151008	0.215854176368759	0.829101416969871	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.19339979014173	1.43116362910629
Merged-chr4-148494690-1	3.79658111811915	-0.180858237583551	1.17626962655789	-0.153755766110186	0.877802312527441	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.91413689478866	2.18923496216865
Merged-chr15-4580748-1	2.17338995575179	0	1.41263867981212	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87653279-1	2.16513629035298	0	1.40780134212546	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-19911025-1	1.71007247065655	0	1.45501029643165	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-71252475-1	2.02875259517677	1.59306174577386	1.10018812271191	1.44799031446281	0.147619759369535	0.819432619415699	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.735569967392541	1.68598010415578
Merged-chr12-80730730-1	1.19712953813814	0	1.51278930043638	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-127318528-1	1.48364306807411	0	1.52934698492069	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-5710706-1	2.01163188542516	-0.281847717110356	1.44744304872597	-0.19472111000045	0.845611284844626	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	0.306240821987646
Merged-chr9-52174303-1	3.5784619492613	-4.06881249131863	1.11659511072131	-3.64394618268588	0.000268489583352867	0.00684004690595574	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.87519719896553	0
Merged-chr1-124103204-1	2.51680466371184	2.51348502712478	1.35283012527058	1.85794578356396	0.0631767138520648	0.440544823751684	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.733321818366247
Merged-chr18-39481704-1	1.65153622695929	0	1.3708405453805	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-29491586-1	2.05498750597044	0	1.3984796512413	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132784024-1	4.48729061027804	0	1.39662331316284	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-4963370-1	1.89877182711834	0	1.46421793656921	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73322757-1	1.97855531881505	0.6600932399085	1.13328041373263	0.582462409047008	0.560255254817242	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.79695861841345	1.15868211970568
Merged-chr6-124425786-1	2.36981118861093	0	1.35303003885333	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-8980650-1	2.50597669061513	-3.02191950643592	1.23018552993103	-2.45647459908372	0.0140307720772899	0.14247938339745	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56185133960292	0.306240821987646
Merged-chr18-76331492-1	2.59400903788974	0.828169373688659	0.947711905171281	0.873861950208363	0.382193438251828	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14305583046461	2.73780465134031
Merged-chr7-111663292-1	1.41594030565332	0	1.50219760899062	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-79974262-1	1.61140568344288	0	1.37314853719144	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-68271482-1	3.57569399841267	2.00383755115367	1.17458757037965	1.70599247062183	0.0880094814655348	0.562616667564746	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.24742471775159	2.42594657933142
Merged-chr1-170850038-1	3.15533425621776	0	1.32077286878852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-10960295-1	2.86435325130757	-0.0728653933933864	1.12527406734674	-0.0647534636297044	0.94837029428447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83598702745452	2.34526607128738
Merged-chrX-12959620-1	1.33969721457936	0	1.50697322859595	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-3386032-1	2.90603830900765	3.45616842402395	1.17272021466625	2.9471380989263	0.00320729931989631	0.0466675977194265	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.65215194967867
Merged-chr12-44936885-1	4.20661471240897	-2.64688468599264	1.13407976462327	-2.33394931164467	0.0195983762334407	0.184470004639963	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.05110421473743	0.382164212378408
Merged-chr3-94841629-1	4.60737164629658	0.0620278838033684	0.822000085271519	0.0754597048282297	0.939848956978823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.30569271479204	2.08355090189567
Merged-chr8-83751297-1	4.28387138455032	3.56868585452096	1.1224677555774	3.17932148766735	0.001476202649044	0.0256502391339197	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	2.33380954640862
Merged-chr1-169459573-1	1.3062482845251	0	1.54096242545942	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-29148747-1	2.09178363318218	0	1.35155984596989	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-39705286-1	1.86936298492256	0	1.47040880104575	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-38516437-1	2.31068752864873	0	1.35362648623401	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-89758631-1	2.34589954390734	1.097761880584	1.50012814772766	0.731778736534511	0.464303629481049	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.20998056587793	2.02277216991188
Merged-chr3-144531224-1	1.50344692218584	0	1.48772070118581	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-122409405-1	1.67775026927287	2.054605255565	1.66610887537739	1.23317586619278	0.217510157384222	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.47158896970822
Merged-chr18-4370493-1	1.60491971181993	0	2.29991980972111	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-32556219-1	2.75511398530125	-0.730289944902415	1.07583348879863	-0.678813173698392	0.497256245630312	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.8433596068723	2.30929522906377
Merged-chr12-112947564-1	2.19632508285133	0	1.44896759036039	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-129506143-1	3.13129572479266	0.488348111110462	1.33055211157463	0.367026670253846	0.713599124204636	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23725360745526	1.62128842389662
Merged-chr2-132570943-1	1.04410399801555	0	1.65078614346557	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-111128655-1	5.67417711817577	-1.2282460869745	0.799502023049039	-1.53626388872711	0.124473672303353	0.728252895544354	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.73083376820149	0.95685815637649
Merged-chr5-110613604-1	1.1307682689436	0	1.51657168280998	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-59419853-1	3.02504748611868	-0.0618209069671823	1.03484383741671	-0.0597393584731648	0.952363224168157	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.26001272775153	1.19380919831911
Merged-chr5-16424924-1	1.80713249553382	0	1.40296800507539	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-150841374-1	1.67114595395576	0	1.52593027896044	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-132475251-1	1.85055901614224	0	1.41918402078665	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-5635751-1	3.11392760745493	-1.567139589314	0.945687845472507	-1.65714257280212	0.0974906536755348	0.60875530387783	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.25539038605473	0.989878296978726
Merged-chr12-78206755-1	1.93375509742855	0	1.40002477845709	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-124281635-1	2.31945956554427	0	1.3902027783013	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-21071254-1	1.08050912067202	0	1.67893388969067	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-99202512-1	2.32064013190416	0	1.39607845636146	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-62887140-1	3.29388007049799	1.14481500187566	1.17993545367231	0.970235277118464	0.331929230381482	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.961542995662928	1.50871668602081
Merged-chr1-138612598-1	1.190820820342	0	1.5814371782456	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-52793771-1	3.44994293456245	0.134003996925574	0.788744616338673	0.169895292024453	0.865092483716611	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.76200633510851	1.47158896970822
Merged-chr19-5839492-1	2.70764819053424	0	1.39542257492252	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-118595112-1	2.12120306048204	0	1.36164827801835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-86702111-1	3.45746354519134	1.48511254740039	1.81887134309864	0.816502251814217	0.414212936151655	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.17101668696766	2.18231844094686
Merged-chr14-27355800-1	1.47341676191053	0	1.45268431484967	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-18840143-1	1.29718827482009	0	1.5015989301743	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-136201957-1	2.90941637122421	0	1.31887734842816	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-143472873-1	1.59225606018216	0	1.46040840899312	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-112621712-1	1.9468163876549	0.0553453416254345	1.57994009344127	0.0350300254137401	0.972055798742068	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.883977945153821	0.733321818366247
Merged-chr7-100497614-1	1.62984994731094	0	1.52499270895131	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr17-28879991-1	1.73993985836735	0	1.36989358439935	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69629906-1	2.10688928378293	0	1.38930938419312	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-33902966-1	3.66380686996299	0.9973458132786	1.06679094680903	0.934902771964695	0.349838408429776	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.871810791226776	1.29606516661881
Merged-chr14-68609140-1	1.62632050785104	0	1.43205262760568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-6983884-1	2.03411483027815	0	1.40106964946819	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-74190220-1	2.3690191936333	0	1.384909730955	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-58346695-1	1.51064690326493	0	1.66442617628231	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-71636025-1	3.25081880671419	3.08359625757692	1.15213349350863	2.67642271919928	0.0074412724666938	0.0880103874404658	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.800805835289674	2.9679029645664
Merged-chr7-135557442-1	2.00544733288723	0	1.37753681272106	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-193463197-1	1.37823549438271	-3.04607196442845	1.64746550580433	-1.84894430487107	0.0644658553174279	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.66997735664128	0
Merged-chr5-146734232-1	2.39882411081781	0	1.43039300376232	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-55915592-1	3.67250217022971	-1.83999997829717	0.93617911750755	-1.96543582727621	0.049363816232377	0.367257342976317	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.54410940582227	0.989878296978726
Merged-chr9-90200743-1	1.74460667015484	0	1.49119671542579	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-117433277-1	2.52786251069765	2.88053796531243	1.85135165719365	1.55591076072433	0.11972931421792	0.709296605729402	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.21728637777136	3.32525312339942
Merged-chr10-80696703-1	3.84037952475552	-0.955076340519192	1.04021462100375	-0.918153159198624	0.358538687452674	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.9950475489225	1.31734301959449
Merged-chr11-31820544-1	2.63314773335648	2.49243175000123	1.41675887856122	1.75924907739587	0.0785352117072823	0.518641934737147	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527185266979305	2.30670691456252
Merged-chr17-51111426-1	1.84617951580041	0	1.39889635311209	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-108932303-1	2.42829278078612	0	1.36969570229179	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-72092838-1	1.57824445992643	0	1.49232133872309	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-121253401-1	1.68619253893218	0.0498782911949001	1.33717934501384	0.0373011229801667	0.970244910108762	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.49160599924118	1.46928333126936
Merged-chr19-43584969-1	1.24523880562415	0	1.49461799418558	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101670591-1	1.38239511945196	0	1.44426842187621	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-36252712-1	1.95589169205071	0	1.42449124121583	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-37323132-1	2.44981869408292	0	1.34246513889573	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-65396258-1	1.88289990073353	0	1.40193668680188	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102226834-1	2.0310395959954	0	1.43401777410468	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-94470887-1	2.45156196868671	0	1.35554550582753	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-117551222-1	2.43361333102928	-1.03090105210633	0.961159206811596	-1.07256013863311	0.283468517628121	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.215120675365	1.34591112769102
Merged-chr10-7673847-1	2.3869635538867	0	1.39854382322436	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chrX-170677857-1	0.944366198748678	0	1.58647752840904	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-103986075-1	2.41563385929797	0.740735616017915	1.45075796014703	0.510585250170087	0.60964150623971	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	0.306240821987646
Merged-chr7-46770863-1	1.4034717172981	0	1.51818830439892	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-44673823-1	2.9923060500433	0	1.36410170795248	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-55121523-1	1.55139516014073	0	1.40220896560447	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-120600482-1	1.79405301694374	0	1.42420131761808	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-81312547-1	4.35036389049675	1.72097775759934	1.00510472531818	1.71223725672421	0.08685295411451	0.55729508440365	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.83684513309206	3.84647287135764
Merged-chr9-90251916-1	1.79472603130806	0	1.40256416946323	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-104442238-1	2.73082340136602	0.0343383762640653	1.30548486450771	0.0263031592304321	0.979015535082904	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.862965511447223	0.735627456805112
Merged-chr6-8336995-1	2.02602449348908	0	1.39355041515255	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-30346844-1	2.96077400769828	-2.54512236930456	1.1841877630318	-2.14925575889118	0.0316141314345955	0.266502545494316	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21682625237485	0.729295484888209
Merged-chr7-101228246-1	3.84128957288943	1.82262561405807	0.859246935257293	2.12118954315769	0.0339058548956137	0.280741509631116	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.25590917117358	2.94640134381309
Merged-chr18-9507967-1	4.65506640718104	0.891584412729484	0.914234310346686	0.975225281570747	0.329448524137666	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.87235681122577	2.51109349299861
Merged-chr12-21332326-1	1.82172642771831	1.72113460855647	1.21631002279212	1.41504598030483	0.157055015095052	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.05552087422678	2.53886770318549
Merged-chr11-100692479-1	1.60213313114267	0	1.51726435420066	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-107492676-1	1.77285865307076	0	1.40254219815021	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-22144333-1	2.56487485654703	-1.06263681493949	1.11226799789074	-0.955378395274001	0.339386375549823	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.02129009867919	1.31470332505763
Merged-chr3-31087795-1	2.7300894255528	0	1.3958002027602	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150194139-1	4.35329510030449	-2.64396938856784	1.06852696021652	-2.47440587557292	0.0133457982315483	0.137545064368604	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.21083584639019	0.423054662900563
Merged-chr6-47780894-1	6.14887335754083	0.115716192237204	0.745729683442746	0.155171766400645	0.876685905811181	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.56488167201464	2.84476081090671
Merged-chr1-177705380-1	2.36195141383494	0	1.34624595875835	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-117073469-1	1.783425511141	0	1.39325237301614	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-31042909-1	3.72166193851547	-1.65015501421937	1.26040822046353	-1.30922266883701	0.190458935595859	0.983450268775741	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.856023420615499	0
Merged-chr6-86822403-1	1.73917383679627	0	1.40514562394974	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-31928465-1	1.65459417697012	0	1.38305523552117	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-95343343-1	1.41217420674174	0	1.65575350487366	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-75883653-1	2.3918489676371	-2.32133061058328	1.28680558751711	-1.80394819007763	0.0712394293794702	0.482105608143212	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.62723123068911	0.581381506691384
Merged-chr10-19562798-1	2.44690281311542	-0.281392680224378	1.20235186722155	-0.234035217057244	0.814957638492519	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918643588040654	0.563523181795778
Merged-chr11-32567551-1	1.0108970799071	0	1.51707965317947	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-67756378-1	2.99686709236039	2.02421500311934	0.954915982400508	2.11978335311844	0.0340243198026252	0.281496061498135	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.794807375335281	2.31711242604998
Merged-chr4-59532112-1	1.39643146184684	0	1.47236456124633	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-3184564-1	0.72887267161365	0	2.02314725716085	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-27352629-1	1.00749298492601	0	1.59147942462079	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-36769553-1	3.36121711744607	-0.199841126259666	1.02842182384483	-0.194318247266034	0.845926698693566	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.79075552441357	2.38713383244935
Merged-chr14-63127030-1	2.04826143813579	0	1.44198452228799	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-34218465-1	1.81214982400247	0	1.47588674711195	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-146376717-1	2.1805574900707	1.46335174729796	1.63826558643529	0.893232305808287	0.371732781016017	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.447136412149344	0.733321818366247
Merged-chr6-34994836-1	2.10804949046406	0	1.3724388696443	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-191227826-1	1.96092181324593	0	1.40783276426361	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-37855524-1	2.03523551453623	0	1.36521936796928	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-124783442-1	2.59755858487414	-1.05668131065828	2.01817599625252	-0.523582340004242	0.600569067219488	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.35944049847198	1.19133112147929
Merged-chr5-43675277-1	3.00363070257689	0.0360818423696815	1.01494132880872	0.0355506681475196	0.971640644546582	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.27374511348979	1.29948469469889
Merged-chr18-24074550-1	2.27554840402077	0	1.35785762051787	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-63868981-1	2.28018825183385	0	1.37645390371743	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-56694026-1	1.25630454957163	0	2.24978268579723	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-54569256-1	2.21914524908686	0	1.38154897822383	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-140081116-1	1.37023895586101	0	1.73191976818051	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-19473109-1	1.30634060544855	0	1.47502719396447	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-134946304-1	3.01733136087853	-1.63642965321645	0.913948138006433	-1.79050603110363	0.0733725985622997	0.493170728826583	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.09755411782085	1.31734301959449
Merged-chr19-37072649-1	2.02108288201395	0	1.3900852404393	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-120823436-1	2.69258580082457	0	1.37926796784118	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-13237241-1	1.50751078059406	0	1.43905169674623	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-55147944-1	1.53414413925909	0	1.51157845695223	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-118668792-1	1.44726687494292	0	1.42553740606763	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30771210-1	2.59200137199148	0	1.33174468895364	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-86107594-1	1.20356227412986	0	1.49389244612196	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-74834837-1	2.50127500545822	2.53154697986632	1.12322950375517	2.2538109722037	0.0242080622569757	0.21723428127497	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.507921905253811	1.48967077741001
Merged-chr2-122449607-1	1.25803935985701	-0.306619011305701	1.45607542692479	-0.210579071410658	0.833215744710216	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.15349649429462	1.19380919831911
Merged-chr5-117140005-1	1.98447738415092	-3.89084189206997	1.16644779818516	-3.33563310601949	0.000851054011188955	0.0167711023568014	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.71106921423709	0
Merged-chr11-96310338-1	0.944547003187067	0	1.59366550444681	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-37003395-1	2.93718536732478	0	1.41413309656848	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-76378715-1	2.1804508213005	0	1.36610062885762	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-30633453-1	2.16848412796823	0	1.39398682934184	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr18-69407019-1	2.17175936923369	0	1.41689936287112	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-102504001-1	1.96176776991381	0.851880655180091	1.23831883985356	0.687933210546029	0.491494841689657	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.45202302762556	2.278467196053
Merged-chr5-30482510-1	2.15602794175406	0	1.34095681922852	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-103377956-1	2.25221591125888	0	1.42125431916394	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-105117005-1	1.96871879555323	0	1.43465632968769	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-15007131-1	1.16466004906432	0	1.63544957713628	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-51940301-1	2.01349779772006	-0.323307138325182	1.10211034377798	-0.293352784637608	0.76925251102159	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.00612591801315	1.78481374055866
Merged-chr6-50221081-1	1.43926653421924	0	1.4585923902499	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-9082532-1	1.92140379221235	0	1.39198680369519	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-155539030-1	1.53334272829087	0	1.78934970339388	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-77474183-1	2.46157684019648	4.06887645770019	1.88921446140398	2.15373984310726	0.0312605796876205	0.264639699477555	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	1.19604688794884
Merged-chr6-52270623-1	2.14927260613003	0	1.38277756957832	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-84570577-1	1.71788850994204	1.26047295054225	1.5202933539378	0.82909850738834	0.407048668294909	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.382164212378408
Merged-chr10-93768349-1	2.63206584973437	0	1.36890510791405	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-97853638-1	4.411794791303	4.88075834791412	1.07249604006159	4.55084043726056	5.34320581108366e-06	0.000305207278785903	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.189609133343826	3.65520218850103
Merged-chr16-75876156-1	2.15264487976079	0	1.37313357022551	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91279141-1	2.35614768735312	0.322282368744662	1.13285883697886	0.284485902589712	0.776038036038125	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.860429154817231	0.73596151290311
Merged-chr5-64268009-1	1.33949099394144	0	1.44481941714275	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-59223036-1	4.34421461121082	-0.232084437842937	0.833973641472465	-0.27828749771176	0.78079167259929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.95122111909573	1.354969417986
Merged-chr2-65283126-1	1.41082335019553	0	1.55158548412032	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-93323821-1	4.61440869145069	1.33429713272355	0.821563135022438	1.62409567304539	0.104355391311282	0.641868166474682	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96103758201197	2.70824109725134
Merged-chr2-150845928-1	1.68495481907106	0	1.4909889442802	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-123371951-1	2.02720288193405	-2.15121926072487	1.45475249234633	-1.47875275831645	0.139206406124482	0.786357349119155	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.702988096853987	0
Merged-chr1-37154327-1	1.57518040056743	0	1.57912769848781	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-41007325-1	8.29064348557535	-0.260274068872263	0.558502185237552	-0.466021576552218	0.641200056365305	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	3.73930707677152	3.53901644661592
Merged-chr9-104277742-1	2.63267235507746	0	1.34092585446935	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54106512-1	1.8149136154852	0	1.43483329064929	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-59127898-1	1.51974664222805	0	1.44909706587562	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-118297826-1	2.56079993973082	0	1.37970027375299	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-73318265-1	1.22203919420535	0	1.89589252226001	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-36661826-1	2.22205532944258	0	1.36144278458323	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-59667957-2	2.94857249316133	0	1.3695560154891	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-62148514-1	1.20773608931939	0	1.99796870385001	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-172316611-1	4.75460583415329	0.603591877191762	0.647323362964242	0.932442596274876	0.351107839774956	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.12526154709895	2.64850223368472
Merged-chr6-4686196-1	2.04119817114304	0	1.3542626103778	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-44978690-1	1.48175146342315	0	1.53061837637994	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-150092551-1	1.52215520482054	0	1.41560455295799	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr14-74909239-1	0.905073023810267	0	1.53917844074961	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-25774938-1	0.740619971402702	0	2.010892353627	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-169870741-1	2.52274712159838	1.635764481856	1.35417320548338	1.2079433230789	0.227069063829438	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.303053159331258	0.963545719069792
Merged-chr12-8508472-1	2.16102927069721	1.28285002053062	1.41128571536479	0.908993839138398	0.363353377865353	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0.306240821987646
Merged-chr11-32608441-1	1.46125597821123	0	1.4356743891199	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-119204920-1	2.35105854979776	0	1.36139065998246	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-170740206-1	1.78276990174885	0	1.56219985541621	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-85125134-1	6.31766156295507	0.282477820864311	0.855637556308756	0.330137239514039	0.741296266104681	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.81948197248793	2.47898020589019
Merged-chr19-57138109-1	1.78146945256739	0	1.46400919308325	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-46400833-1	2.75878029459203	0	1.33985249638167	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-84394315-1	1.57343461543327	-1.44534536938094	1.62649033950807	-0.888628314766432	0.374202868581031	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.77366931212301	0.733321818366247
Merged-chr15-94539679-1	1.81932100504127	0	1.40025464310333	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr19-16067444-1	3.27355346379639	0	1.34635948324879	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83821249-1	1.12760351313766	0	1.67820897194985	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-132895589-1	4.00551608672862	-0.450145101413669	1.01706558406588	-0.442592010255762	0.658060864880439	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.65770830359347	1.61477032079243
Merged-chr6-149323993-1	2.49282143826784	0	1.37478116316802	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-115490827-1	7.72089783882499	1.74899969842168	0.64230947326709	2.72298599229034	0.00646948008830765	0.0793905438216998	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.96931302208608	3.08561748733286
Merged-chr6-118302941-1	2.04231948008992	0	1.46214013502337	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-66511119-1	1.36781580039743	0	1.50820390807568	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr16-25967516-1	2.5970863744185	0	1.32309771107194	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-60478826-1	1.41360597904754	0	1.48427324045049	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-117471790-1	1.1540243141771	0	1.4465996776511	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-80095826-1	2.87745731765222	0	1.35784215945985	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67766358-1	2.41920516554015	0	1.33688069204771	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-66385804-1	4.60143572740117	0.45696997717687	0.881620409492211	0.518329626057627	0.604228305943418	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.12154377408284	1.59982791176663
Merged-chrX-7862587-1	1.77933742987678	0	1.37953604987392	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-66831489-1	1.55746617974568	0	1.58612369290398	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-37224300-1	3.39891155120436	2.05453245640372	1.17367317000736	1.75051497206061	0.0800294929429473	0.525271921037549	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.918586564115396	2.25389865972503
Merged-chr14-30217201-1	1.53642284687089	0	1.45292881013014	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-61734404-1	2.00578304537534	0	1.37916649880004	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-11979842-1	0.755918569124563	0	1.79435874134588	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-91271797-1	2.37820992088075	-0.99714181961503	1.43890324876096	-0.692987398891254	0.488317459493383	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.482493063379689	0
Merged-chr15-13088825-1	2.38967734799624	0	1.3687800196623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-87501254-1	3.04643472767634	0.481852589391362	0.975846798058419	0.493778931641804	0.621462313890845	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.75424069455774	2.1639482234215
Merged-chr11-80159711-1	1.52659020188698	0	1.45429724892635	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-83854431-1	1.34073063413285	0	1.52837521368635	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-62396013-1	1.15907580002889	0	1.55767848686606	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr7-35030545-1	1.30643261522968	0	1.64426022334153	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr12-84546224-1	2.68317420205547	0	1.36578615367689	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-67042371-1	1.73706024971499	0	1.53832997601143	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-87042147-1	2.18070096641838	0	1.36860712159623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-102888572-1	0.957079536773776	0	1.5122679446812	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-54988132-1	1.60172771858237	0	1.41093266850097	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-72177345-1	4.30501177535191	-0.593079204211293	0.836623112599361	-0.708896509407462	0.478388701391919	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.75176563801592	1.5268023559189
Merged-chr11-19965101-1	3.55509036511212	0	1.39845395650175	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr9-78073577-1	3.2327708593549	4.40773347852978	1.06414018464997	4.14206092591045	3.4419887443947e-05	0.00135657537087585	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	2.66070805023717
Merged-chr11-67112906-1	3.11382377105039	3.95070042777266	1.15655748541632	3.4159135863018	0.000635684159473787	0.0132629045609751	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.200990769753371	2.10514468042323
Merged-chr16-10769045-1	1.79267699608613	0	1.52870898164599	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr11-118739062-1	2.06069927137229	0	1.37845362637587	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-6572466-1	2.86728401990425	0	1.34273680083665	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-101689824-1	1.70137850705266	0	1.36542541491524	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr1-119522837-1	2.81341609507254	0	1.3658710843073	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-4115477-1	1.31760545474611	1.55792684734688	1.30300518008845	1.19564133063625	0.231836555383963	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.401484881774132	1.19133112147929
Merged-chr3-123149931-1	2.90838198563	0	1.34425098709623	0	1	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr5-140225308-1	1.12450437651354	0	1.45837608760823	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr2-104002934-1	1.42369546852329	0	1.52164516543484	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-44941707-1	1.22128360972456	0	1.59075590684895	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr8-14824940-1	3.17496862400287	-0.437457333502582	1.36370810215039	-0.320785168624261	0.7483731996286	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.466456797800096	0
Merged-chr5-146905977-1	3.25964948058189	-0.728820815751225	1.12882969125039	-0.645642847101162	0.518510681872735	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.23553092496926	0.581381506691384
Merged-chr10-44690052-1	1.01230864947683	0	1.79978925341175	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr3-126591176-1	3.77678488361407	0.327812959966634	1.23492948822293	0.265450750907534	0.790662244356447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	2.14369675454979	2.30491330480933
Merged-chr19-17142635-1	2.34208784087084	-0.366144955167021	1.02869764399475	-0.355930585925294	0.721892549527929	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.98515594767717	1.47711801254374
Merged-chr8-83076731-1	2.00388755833052	-2.11320742151694	1.49232117643264	-1.41605403373589	0.156759684841746	0.855530799220529	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.936187638705818	0
Merged-chr17-31576841-1	1.35409916621976	0	1.48232399999079	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr4-136449168-1	1.77305881999966	3.25993960149442	1.23119107819271	2.64779339229761	0.00810190234530126	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.391401297136091	2.22017310661124
Merged-chr8-41235786-1	3.20802880286579	1.14288340104246	0.742908446615824	1.5383906405273	0.123953129321151	0.725922314807306	BALBCJ_F1_Control-BALBCJ_F1_LPS	1.86340147934324	2.98794568696598
Merged-chr5-146820243-1	3.00319704101523	3.63185115750425	1.25722448375389	2.88878494209726	0.00386733467043094	0.0537233952750808	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.527242290904563	2.60706636077045
Merged-chr2-84049004-1	1.30966796695074	0	1.65760679887114	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr6-131003518-1	1.74146827018712	0	1.44285299173253	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr13-43759256-1	3.8263240764305	5.50319904943151	1.27894371433727	4.30292513090241	1.68557821505196e-05	0.000769174539390957	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.290685631813391	4.21607361705739
Merged-chr5-65991632-1	7.24863888243836	4.02977593887602	0.953021823897442	4.22841936861004	2.3533882654706e-05	0.0010025065814566	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.586365432441712	3.18928444155521
Merged-chr17-74888321-1	1.85856660553522	-1.15354884318815	1.56780563854703	-0.735772862927835	0.461868938701141	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.993642064779401	0.420961122473315
Merged-chr2-27657036-1	1.53021419555869	0	1.42452011412527	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0
Merged-chr10-30808400-1	2.59304194948602	-0.846336415800528	1.40691135110095	-0.601556320615542	0.547469511398447	1	BALBCJ_F1_Control-BALBCJ_F1_LPS	0.51844728698002	0
Merged-chr15-101309063-1	1.70107458037585	0	1.47295430210629	0	1	NA	BALBCJ_F1_Control-BALBCJ_F1_LPS	0	0